RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC35A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000102100

Ensembl transcript IDs: ENST00000247138.11, ENST00000376512.2, ENST00000376515.8, ENST00000376521.6, ENST00000376529.8, ENST00000413561.7, ENST00000445167.7, ENST00000446885.1, ENST00000452555.7, ENST00000616181.5, ENST00000634461.1, ENST00000634665.1, ENST00000635015.1, ENST00000635238.1, ENST00000635285.1, ENST00000635460.1, ENST00000635589.1, ENST00000635628.1

Found 856 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCGTGATGAGGTCTCCACGGTGGGAAGACAGCTGCGGTGGTGGTaGCTGCCCGGGAGGCTGCTGGTGAACGCAGGGCCCGGAGGCGGA +
Preference number: 1 (lower is better)
Translates to: LRDEVSTVGRQLRWW*LPGRLLVNAGPGGG
Trigger: TCCGCCTCCGGGCCCTGCGTTCACCAGCAGCCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCATCACGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413561.7
ENST00000635628.1
3UTR GCA 90 bp GTAGACACCTGCGAAGCCGGAGGAGAGACAGGAGGCCACGACGGCTaGCAGGCCTGCCCCAGGGTTCTGATCCAGTGGCCGTGGGCCTCC +
Preference number: 1 (lower is better)
Translates to: VDTCEAGGETGGHDG*QACPRVLIQWPWAS
Trigger: GGAGGCCCACGGCCACTGGATCAGAACCCTGGGGCAGGCCTGGCAGCCGTCGTGGCCTCCTGTCTCTCCTCCGGCTTCGCAGGTGTCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR CCA 90 bp AAAGGGCTCCGTGATGAGGTCTCCACGGTGGGAAGACAGCTGCGGTaGTGGTGGCTGCCCGGGAGGCTGCTGGTGAACGCAGGGCCCGGA +
Preference number: 1 (lower is better)
Translates to: KGLRDEVSTVGRQLR*WWLPGRLLVNAGPG
Trigger: TCCGGGCCCTGCGTTCACCAGCAGCCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCATCACGGAGCCCTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413561.7
ENST00000635628.1
3UTR GCA 90 bp AGGGTTCTGATCCAGTGGCCGTGGGCCTCCCCCACCGGCTTGCTGTaGCTGGACAATGGCGACGCCAGTGAAGAGGAGCAGCAGGGAGGC +
Preference number: 1 (lower is better)
Translates to: RVLIQWPWASPTGLL*LDNGDASEEEQQGG
Trigger: GCCTCCCTGCTGCTCCTCTTCACTGGCGTCGCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGGCCCACGGCCACTGGATCAGAACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR CCA 90 bp AGCACTGACTTTGGCAGAAAGGGCTCCGTGATGAGGTCTCCACGGTaGGAAGACAGCTGCGGTGGTGGTGGCTGCCCGGGAGGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: STDFGRKGSVMRSPR*EDSCGGGGCPGGCW
Trigger: CCAGCAGCCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCATCACGGAGCCCTTTCTGCCAAAGTCAGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413561.7
ENST00000635628.1
3UTR GCA 90 bp TGGACAATGGCGACGCCAGTGAAGAGGAGCAGCAGGGAGGCCCACTaGAGCCGGGAAAGGCTGCGATTCAGCATGAGCACGGAGAACAGC +
Preference number: 1 (lower is better)
Translates to: WTMATPVKRSSREAH*SRERLRFSMSTENS
Trigger: GCTGTTCTCCGTGCTCATGCTGAATCGCAGCCTTTCCCGGCTGCAGTGGGCCTCCCTGCTGCTCCTCTTCACTGGCGTCGCCATTGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR CCA 90 bp CACTTCCGCCATGACCACAGCAGTGGTGGCAAAGAAGCGGTCCCCTaGCAACGTGCGGGCGTAGCGGATGCTGAGGATGAGGGAGGCATT +
Preference number: 1 (lower is better)
Translates to: HFRHDHSSGGKEAVP*QRAGVADAEDEGGI
Trigger: AATGCCTCCCTCATCCTCAGCATCCGCTACGCCCGCACGTTGCCAGGGGACCGCTTCTTTGCCACCACTGCTGTGGTCATGGCGGAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR TCA 90 bp GCAGCAGGGAGGCCCACTGCAGCCGGGAAAGGCTGCGATTCAGCATaGGCACGGAGAACAGCGCTGTGGTCAGGATCTTCAGCTGGTATG +
Preference number: 1 (lower is better)
Translates to: AAGRPTAAGKGCDSA*ARRTALWSGSSAGM
Trigger: CATACCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCTTTCCCGGCTGCAGTGGGCCTCCCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR TCA 90 bp GGCCCAGTTGCAGGTTGCGCAGCCACACGGAGCCTGAGCTGCCTTTaGGGATCTTCTCAAAGTAGACACCTGCGAAGCCGGAGGAGAGAC +
Preference number: 1 (lower is better)
Translates to: GPVAGCAATRSLSCL*GSSQSRHLRSRRRD
Trigger: GTCTCTCCTCCGGCTTCGCAGGTGTCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR TCA 90 bp CACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGTCTCAGTaGCCTGGGAGAAAAGACCATCTCCCAAACCCAGAGGAGCCAGGC +
Preference number: 1 (lower is better)
Translates to: HVTPSSSPTPLQKSQ*PGRKDHLPNPEEPG
Trigger: GCCTGGCTCCTCTGGGTTTGGGAGATGGTCTTTTCTCCCAGGTCACTGAGACTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR TCA 90 bp TGTGCCGAAGAGGCCCAGTTGCAGGTTGCGCAGCCACACGGAGCCTaGGCTGCCTTTGAGGATCTTCTCAAAGTAGACACCTGCGAAGCC +
Preference number: 1 (lower is better)
Translates to: CAEEAQLQVAQPHGA*AAFEDLLKVDTCEA
Trigger: GGCTTCGCAGGTGTCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR GCA 90 bp GCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTaGTGGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCA +
Preference number: 1 (lower is better)
Translates to: AAGVLSSVSLWRWRD*WEGLSQTRNLQKRA
Trigger: TGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCCAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR CCA 90 bp GCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTaGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAG +
Preference number: 1 (lower is better)
Translates to: AGVLSSVSLWRWRDC*EGLSQTRNLQKRAQ
Trigger: CTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCCAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR CCA 90 bp ACTGCGAGCTTGAGCGTGTCCACATACTGCACCAGGACAGCCTCATaGAGGAAGAGAACCAGGTGCTTCACGTTACCCCTCTTCTGTGCG +
Preference number: 1 (lower is better)
Translates to: TASLSVSTYCTRTAS*RKRTRCFTLPLFCA
Trigger: CGCACAGAAGAGGGGTAACGTGAAGCACCTGGTTCTCTTCCTCCATGAGGCTGTCCTGGTGCAGTATGTGGACACGCTCAAGCTCGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR CCA 90 bp CGCCAAGGGCAAATAATGGGTCCACGTGGAAGCCAAAGAGGCGAATaGAGGCAACAGTGGACAGCACAATGGACAGGGAGGTGGCAAAGC +
Preference number: 1 (lower is better)
Translates to: RQGQIMGPRGSQRGE*RQQWTAQWTGRWQS
Trigger: GCTTTGCCACCTCCCTGTCCATTGTGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCTTCCACGTGGACCCATTATTTGCCCTTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR CCA 90 bp GAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTaGTCCCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGC +
Preference number: 1 (lower is better)
Translates to: ESSVYLTLPLILIRV*SQLGQGQEERTRPG
Trigger: GCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR CCA 90 bp GCACCAATGACGAGTCCAGCGCCAAGGGCAAATAATGGGTCCACGTaGAAGCCAAAGAGGCGAATGGAGGCAACAGTGGACAGCACAATG +
Preference number: 1 (lower is better)
Translates to: APMTSPAPRANNGST*KPKRRMEATVDSTM
Trigger: CATTGTGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCTTCCACGTGGACCCATTATTTGCCCTTGGCGCTGGACTCGTCATTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR GCA 90 bp AACATACTGGAGGTTATTCTGCAAGGTGTAGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCACATACTGCACCAGGACAGCCTCATG +
Preference number: 1 (lower is better)
Translates to: NILEVILQGVDERGH*ELERVHILHQDSLM
Trigger: CATGAGGCTGTCCTGGTGCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGAATAACCTCCAGTATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR TCA 90 bp TTTCCTCTCCTAGACATCTCCAAAAATAAGCCTACATCTGGCAACTaGCAGTGTCTTAAATACAATGAGATTCAGCCACTTCAAGGACCT +
Preference number: 1 (lower is better)
Translates to: FPLLDISKNKPTSGN*QCLKYNEIQPLQGP
Trigger: AGGTCCTTGAAGTGGCTGAATCTCATTGTATTTAAGACACTGTCAGTTGCCAGATGTAGGCTTATTTTTGGAGATGTCTAGGAGAGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
3UTR TCA 90 bp GGCACTGCACGTGAATTCATTCATTTAATTCTCACAACACCATTCTaGAGTGAGCACCACTGTAAGCCCCAATTTAAAGGTGAGAAAACT +
Preference number: 1 (lower is better)
Translates to: GTAREFIHLILTTPF*SEHHCKPQFKGEKT
Trigger: AGTTTTCTCACCTTTAAATTGGGGCTTACAGTGGTGCTCACTTCAGAATGGTGTTGTGAGAATTAAATGAATGAATTCACGTGCAGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635015.1
3UTR-3UTR CCA 90 bp CTGGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGCCAGGCCCCGGAGGGTaGCGACTTGGGTCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: LGGTLPDEKPPEEGTGSGPGPGG*RLGSCR
Trigger: TCTGCAGGACCCAAGTCGCCACCCTCCGGGGCCTGG...CCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp AGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGGACCAGGCCCCGGAGGGTaGCGACTTGGGTCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: RDSPRRETSRRGHRVGEGPGPGG*RLGSCR
Trigger: TCTGCAGGACCCAAGTCGCCACCCTCCGGGGCCTGG...TCCCTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp AAAGGGCTCCGTGATGAGGTCTCCACGGTGGGAAGACAGCTGCGGTGGTGGTGGCTGATCCAGTGGCCGTaGGCCTCCCCCACCGGCTTG +
Preference number: 2 (lower is better)
Translates to: KGLRDEVSTVGRQLRWWWLIQWP*ASPTGL
Trigger: CAAGCCGGTGGGGGAGGCCCACGGCCACTGGATCAG...CCACCACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCATCACGGAGCCCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR CCA 90 bp CTGGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGCGGAGGGTGGCGACTTaGGTCCTGCAGATGCCCAAC +
Preference number: 2 (lower is better)
Translates to: LGGTLPDEKPPEEGTGSGRRVAT*VLQMPN
Trigger: GTTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCG...CCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGCCAGGCCCCGGAGGGTaGCGACTTGGGTCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGPGPGG*RLGSCR
Trigger: TCTGCAGGACCCAAGTCGCCACCCTCCGGGGCCTGG...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp CTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTCGGAGGGTGGCGACTTaGGTCCTGCAGATGCCCAAC +
Preference number: 2 (lower is better)
Translates to: LQGKGVTLPGRVHVTPSSRRVAT*VLQMPN
Trigger: GTTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCG...AGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCAGGCCCCGGAGGGTaGCGACTTGGGTCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTPGPGG*RLGSCR
Trigger: TCTGCAGGACCCAAGTCGCCACCCTCCGGGGCCTGG...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR-3UTR GCA 90 bp GCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGTGGCGACTTGGGTCCTaGAGATGCCCAACACCCTCC +
Preference number: 2 (lower is better)
Translates to: ASKEVRGSRGGSSKTPSRWRLGS*RCPTPS
Trigger: GGAGGGTGTTGGGCATCTGCAGGACCCAAGTCGCCA...CCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR-3UTR GCA 90 bp CACTTCACCAGCACTGACTTTGGCAGAAAGGGCTCCGTGATGAGGTCTCCACGGAGCAGGGAGGCCCACTaGAGCCGGGAAAGGCTGCGA +
Preference number: 2 (lower is better)
Translates to: HFTSTDFGRKGSVMRSPRSREAH*SRERLR
Trigger: TCGCAGCCTTTCCCGGCTGCAGTGGGCCTCCCTGCT...CCGTGGAGACCTCATCACGGAGCCCTTTCTGCCAAAGTCAGTGCTGGTGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR CCA 90 bp ACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCAGCTGCGGTGGTGGTaGCTGCCCGGGAGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: TGRHRSFLKSCGSFVQCVQLRWW*LPGRLL
Trigger: CAGCAGCCTCCCGGGCAGCCACCACCACCGCAGCTG...GACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413561.7
ENST00000635628.1
3UTR-3UTR CCA 90 bp TCTCCCTGGGGACTCACAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCGGAAGACAGCTGCGGTaGTGGTGGCTGCCCGGGAGG +
Preference number: 2 (lower is better)
Translates to: SPWGLTRSPSSRYQGSWPGRQLR*WWLPGR
Trigger: CCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCC...GGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTGTGAGTCCCCAGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413561.7
ENST00000635628.1
3UTR-3UTR GCA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTTGGCGACTTGGGTCCTaGAGATGCCCAACACCCTCC +
Preference number: 2 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAAWRLGS*RCPTPS
Trigger: GGAGGGTGTTGGGCATCTGCAGGACCCAAGTCGCCA...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp ATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGCATGTTGGCCCTGGGTaGGGCAGGGGTGGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: IPEELREFCPVCPYGGGGHVGPG*GRGGGD
Trigger: GTCCCCACCACCCCTGCCCCACCCAGGGCCAACATG...CCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp TATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGGTGGAGGGACTGCTaGGAGGGACTCTCCCAGACG +
Preference number: 2 (lower is better)
Translates to: YGQLNPTGRHRSFLKSCGRWRDC*EGLSQT
Trigger: CGTCTGGGAGAGTCCCTCCCAGCAGTCCCTCCACCT...CCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp CCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAAAAAGCTGGGCTAGGCTaGCAGGCGGGTTTCCTGAGC +
Preference number: 2 (lower is better)
Translates to: PPTLPPKRLEGAEAAALKKAGLG*QAGFLS
Trigger: GCTCAGGAAACCCGCCTGCCAGCCTAGCCCAGCTTT...TTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
3UTR-3UTR CCA 90 bp GCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACGGAACAGACAGCTGCGGTGGTaGTGGCTGCCCGGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: AHLQGIKEAGPRPHKRRNRQLRW*WLPGRL
Trigger: CAGCCTCCCGGGCAGCCACCACCACCGCAGCTGTCT...GTTCCGTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413561.7
ENST00000635628.1
3UTR-3UTR TCA 90 bp ATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTACAGGAAGGGTTCACGTaGCACCCAGCTCTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: IPPTLPPKRLEGAEAAALQEGFT*HPALVP
Trigger: TGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTG...TAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR-3UTR TCA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGGGCATCGGTCATTCCTaGAGAGCTGCGGGAGTTTTG +
Preference number: 2 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGGIGHS*RAAGVL
Trigger: CAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCC...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR TCA 90 bp AGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACGCCTGCCCCAGGGTTCTaGTCCAGTGGCCGTGGGCCT +
Preference number: 2 (lower is better)
Translates to: RSPSSRYQGSWPKATQKTPAPGF*SSGRGP
Trigger: AGGCCCACGGCCACTGGATCAGAACCCTGGGGCAGG...CGTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR CCA 90 bp AAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGAGGTGGAGGGACTGCTaGGAGGGACTCTCCCAGACG +
Preference number: 2 (lower is better)
Translates to: KSCGSFVQCVLMEVEGLLRWRDC*EGLSQT
Trigger: CGTCTGGGAGAGTCCCTCCCAGCAGTCCCTCCACCT...CAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR CAA 90 bp TTACCCCTCTTCTGTGCGAAGAGCAGCAGCAGGCAGGTGAGACCTTaGAGCACTTCCGCCATGACCACAGCAGTGGTGGCAAAGAAGCGG +
Preference number: 2 (lower is better)
Translates to: LPLFCAKSSSRQVRP*STSAMTTAVVAKKR
Trigger: CCGCTTCTTTGCCACCACTGCTGTGGTCATGGCGGAAGTGCTCAAAGGTCTCACCTGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR CAA 90 bp ATGGACAGGGAGGTGGCAAAGCCCTTGAGGATATTGTCAGCGTACTaGACAACCACAGCCACCAGTAGCCCGCCGAAGGCCTGGTTGAGC +
Preference number: 2 (lower is better)
Translates to: MDREVAKPLRILSAY*TTTATSSPPKAWLS
Trigger: GCTCAACCAGGCCTTCGGCGGGCTACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATATCCTCAAGGGCTTTGCCACCTCCCTGTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR TCA 90 bp CTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTCTCCAGAAGTCTCAGTaGCCTGGGAGAAAAGACCAT +
Preference number: 2 (lower is better)
Translates to: LQGKGVTLPGRVHVTPSSLQKSQ*PGRKDH
Trigger: ATGGTCTTTTCTCCCAGGTCACTGAGACTTCTGGAG...AGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR-3UTR TCA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGTCACTTCACCAGCACTaGCTTTGGCAGAAAGGGCTC +
Preference number: 2 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGSLHQH*LWQKGL
Trigger: GAGCCCTTTCTGCCAAAGTCAGTGCTGGTGAAGTGA...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413561.7
ENST00000635628.1
3UTR-3UTR CCA 90 bp CCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCGGGGCTGAGCTGAGGTaGGTCATGAGAGAGCTTAGT +
Preference number: 2 (lower is better)
Translates to: PTLPPKRLEGAEAAALKPGAELR*VMRELS
Trigger: ACTAAGCTCTCTCATGACCCACCTCAGCTCAGCCCC...GGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp AACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCGGGGCTGAGCTGAGGTaGGTCATGAGAGAGCTTAGT +
Preference number: 2 (lower is better)
Translates to: NPASKEVRGSRGGSSKTPGAELR*VMRELS
Trigger: ACTAAGCTCTCTCATGACCCACCTCAGCTCAGCCCC...GGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGTCCAGTGTGTCCTTATaGAGGTGGAGGGACTGCTGG +
Preference number: 2 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKSSVSL*RWRDCW
Trigger: CCAGCAGTCCCTCCACCTCCATAAGGACACACTGGA...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp CTGGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGGTCAGGATCTTCAGCTaGTATGTCACCTGGAAAGTG +
Preference number: 2 (lower is better)
Translates to: LGGTLPDEKPPEEGTGSGVRIFS*YVTWKV
Trigger: CACTTTCCAGGTGACATACCAGCTGAAGATCCTGAC...CCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR CAA 90 bp GTGGACAGCACAATGGACAGGGAGGTGGCAAAGCCCTTGAGGATATaGTCAGCGTACTTGACAACCACAGCCACCAGTAGCCCGCCGAAG +
Preference number: 2 (lower is better)
Translates to: VDSTMDREVAKPLRI*SAYLTTTATSSPPK
Trigger: CTTCGGCGGGCTACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATATCCTCAAGGGCTTTGCCACCTCCCTGTCCATTGTGCTGTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR TCA 90 bp GGTAAGGGAGGAGAGAAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCAGGAAGGGTTCACGTaGCACCCAGCTCTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: GKGGEKASNYGQLNPTGRQEGFT*HPALVP
Trigger: TGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTG...CCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTCTCTCCTCCCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR TCA 90 bp CTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCATCAATCCCAAGACACCCCCCAAACTATGGGCAACTaGACCCCACAGGTAGGCATC +
Preference number: 2 (lower is better)
Translates to: LWGAQEAGSTVHQSQDTPQTMGN*TPQVGI
Trigger: GATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTG...GGGGGTGTCTTGGGATTGATGAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
3UTR-3UTR CCA 90 bp CCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAAATACTGATCAGAGTTTaGTCCCAGCTGGGCCAAGGG +
Preference number: 2 (lower is better)
Translates to: PPTLPPKRLEGAEAAALKILIRV*SQLGQG
Trigger: CCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTAT...TTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp CCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGGCTGGGGCTGAGCTGAGGTaGGTCATGAGAGAGCTTAGT +
Preference number: 2 (lower is better)
Translates to: PRARRENEARPMSSIPAAGAELR*VMRELS
Trigger: ACTAAGCTCTCTCATGACCCACCTCAGCTCAGCCCC...AGCCGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR CAA 90 bp GGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTaGGTCCCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: GVQCLPHSTPNTDQS*VPAGPRARRENEAR
Trigger: CCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR TCA 90 bp GGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTCAGGAAGGGTTCACGTaGCACCCAGCTCTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: GRHRSFLKSCGSFVQCVLQEGFT*HPALVP
Trigger: TGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTG...AAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR TCA 90 bp CCAGGCCAATGTCTTCAATCCCAGCGGCTAGGAACCCTTCACCTTGGTGAGCAAGGCATCGGTCATTCCTaGAGAGCTGCGGGAGTTTTG +
Preference number: 2 (lower is better)
Translates to: PGQCLQSQRLGTLHLGEQGIGHS*RAAGVL
Trigger: CAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCC...TTGCTCACCAAGGTGAAGGGTTCCTAGCCGCTGGGATTGAAGACATTGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR TCA 90 bp GCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGGGAGCTCCAGAAGTCTCAGTaGCCTGGGAGAAAAGACCAT +
Preference number: 2 (lower is better)
Translates to: AAGVLSSVSLWRWRDCWELQKSQ*PGRKDH
Trigger: ATGGTCTTTTCTCCCAGGTCACTGAGACTTCTGGAG...CTCCCAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR-3UTR TCA 90 bp CCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCTCCAGAAGTCTCAGTaGCCTGGGAGAAAAGACCAT +
Preference number: 2 (lower is better)
Translates to: PTLPPKRLEGAEAAALKPLQKSQ*PGRKDH
Trigger: ATGGTCTTTTCTCCCAGGTCACTGAGACTTCTGGAG...GGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR-3UTR GCA 90 bp GCCCAAGGCCACACAAAAGACGGAACTAGTAACATGATCCAGAGCGGTGGTAAGTGGCGACTTGGGTCCTaGAGATGCCCAACACCCTCC +
Preference number: 2 (lower is better)
Translates to: AQGHTKDGTSNMIQSGGKWRLGS*RCPTPS
Trigger: GGAGGGTGTTGGGCATCTGCAGGACCCAAGTCGCCA...CTTACCACCGCTCTGGATCATGTTACTAGTTCCGTCTTTTGTGTGGCCTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp AGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCGAAGGCCTCAAACTATaGGCAACTGAACCCCACAGG +
Preference number: 2 (lower is better)
Translates to: SWAKGKKRERGQANVFNPEGLKL*ATEPHR
Trigger: CCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTC...GGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR CAA 90 bp GAGGCAACAGTGGACAGCACAATGGACAGGGAGGTGGCAAAGCCCTaGAGGATATTGTCAGCGTACTTGACAACCACAGCCACCAGTAGC +
Preference number: 2 (lower is better)
Translates to: EATVDSTMDREVAKP*RILSAYLTTTATSS
Trigger: GCTACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATATCCTCAAGGGCTTTGCCACCTCCCTGTCCATTGTGCTGTCCACTGTTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR TCA 90 bp TCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCCAGGAAGGGTTCACGTaGCACCCAGCTCTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: SNYGQLNPTGRHRSFLKSQEGFT*HPALVP
Trigger: TGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTG...GCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp GGCCAATGTCTTCAATCCCAGCGGCTAGGAACCCTTCACCTTGGTGAGCAACAAGAGTTTGGTCCCAGCTaGGCCAAGGGCAAGAAGAGA +
Preference number: 2 (lower is better)
Translates to: GQCLQSQRLGTLHLGEQQEFGPS*AKGKKR
Trigger: TCTCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTC...TTGTTGCTCACCAAGGTGAAGGGTTCCTAGCCGCTGGGATTGAAGACATTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635285.1
3UTR-3UTR CCA 90 bp GGTAAGGGAGGAGAGAAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGATACTGATCAGAGTTTaGTCCCAGCTGGGCCAAGGG +
Preference number: 2 (lower is better)
Translates to: GKGGEKASNYGQLNPTGRILIRV*SQLGQG
Trigger: CCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTAT...CCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTCTCTCCTCCCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp TGGTGGGGACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGGGGGCTGAGCTGAGGTaGGTCATGAGAGAGCTTAGT +
Preference number: 2 (lower is better)
Translates to: WWGQGVQCLPHSTPNTDQGAELR*VMRELS
Trigger: ACTAAGCTCTCTCATGACCCACCTCAGCTCAGCCCC...CTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTCCCCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp CGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGTCCAGTGTGTCCTTATaGAGGTGGAGGGACTGCTGG +
Preference number: 2 (lower is better)
Translates to: RSFLKSCGSFVQCVLMEVSSVSL*RWRDCW
Trigger: CCAGCAGTCCCTCCACCTCCATAAGGACACACTGGA...CACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp CCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCAGAAGGCCTCAAACTATaGGCAACTGAACCCCACAGG +
Preference number: 2 (lower is better)
Translates to: PHSTPNTDQSLVPAGPRAEGLKL*ATEPHR
Trigger: CCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTC...TGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp GGTGAGGCTGGTAGTCCTGGGGTTAGTAATGGTGCCCACCTGGTCAGAAAGCTAAGCCAAAGAGGCGAATaGAGGCAACAGTGGACAGCA +
Preference number: 2 (lower is better)
Translates to: GEAGSPGVSNGAHLVRKLSQRGE*RQQWTA
Trigger: TGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCT...TAGCTTTCTGACCAGGTGGGCACCATTACTAACCCCAGGACTACCAGCCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR TCA 90 bp CAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACAGGAAGGGTTCACGTaGCACCCAGCTCTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: QEAHLQGIKEAGPRPHKRQEGFT*HPALVP
Trigger: TGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTG...TCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR TCA 90 bp CCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAATTCTGCCAGAAGGGCTaGTGCAAAAATCTTAGCTCT +
Preference number: 2 (lower is better)
Translates to: PPTLPPKRLEGAEAAALKFCQKG*CKNLSS
Trigger: AGAGCTAAGATTTTTGCATCAGCCCTTCTGGCAGAA...TTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
3UTR-3UTR TCA 90 bp AAAGGGCTCCGTGATGAGGTCTCCACGGTGGGAAGACAGCTGCGGTGGTGGTGGCCTACATCTGGCAACTaGCAGTGTCTTAAATACAAT +
Preference number: 2 (lower is better)
Translates to: KGLRDEVSTVGRQLRWWWPTSGN*QCLKYN
Trigger: ATTGTATTTAAGACACTGTCAGTTGCCAGATGTAGG...CCACCACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCATCACGGAGCCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413561.7
ENST00000635628.1
3UTR-3UTR GCA 90 bp CCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGGCTTCATTCCTGAAGAGCTaGGGGAGTTTTGTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: PRARRENEARPMSSIPAASFLKS*GSFVQC
Trigger: ACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGA...AGCCGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp AAAGACGGAACTAGTAACATGATCCAGAGCGGTGGTAAGGGAGGAGAGAAGGCCGAGTTTGGTCCCAGCTaGGCCAAGGGCAAGAAGAGA +
Preference number: 2 (lower is better)
Translates to: KDGTSNMIQSGGKGGEKAEFGPS*AKGKKR
Trigger: TCTCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTC...GGCCTTCTCTCCTCCCTTACCACCGCTCTGGATCATGTTACTAGTTCCGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp GCTCTATTTACATATAGCAAAGACAGCCCAGGCATCTTCCATGCACACACACACCGGAGGGTGGCGACTTaGGTCCTGCAGATGCCCAAC +
Preference number: 2 (lower is better)
Translates to: ALFTYSKDSPGIFHAHTHRRVAT*VLQMPN
Trigger: GTTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCG...GTGTGTGTGTGCATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAATAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635628.1
3UTR-3UTR TCA 90 bp CCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCATATTGTCAGCGTACTTaGCAACCACAGCCACCAGTA +
Preference number: 2 (lower is better)
Translates to: PHSTPNTDQSLVPAGPRAYCQRT*QPQPPV
Trigger: TACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATA...TGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR TCA 90 bp GTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTCAAACTATGGGCAACTaGACCCCACAGGTAGGCATC +
Preference number: 2 (lower is better)
Translates to: VQCLPHSTPNTDQSLVPAQTMGN*TPQVGI
Trigger: GATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTG...AGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR CCA 90 bp CCAATGGCTCTATTTACATATAGCAAAGACAGCCCAGGCATCTTCCATGCACACATGAGGTCTCCACGGTaGGAAGACAGCTGCGGTGGT +
Preference number: 2 (lower is better)
Translates to: PMALFTYSKDSPGIFHAHMRSPR*EDSCGG
Trigger: ACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCAT...GTGTGCATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAATAGAGCCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413561.7
ENST00000635628.1
3UTR-3UTR TCA 90 bp CAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACTCCAGAAGTCTCAGTaGCCTGGGAGAAAAGACCAT +
Preference number: 2 (lower is better)
Translates to: QEAHLQGIKEAGPRPHKRLQKSQ*PGRKDH
Trigger: ATGGTCTTTTCTCCCAGGTCACTGAGACTTCTGGAG...TCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR TCA 90 bp GTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTAACCCTTCACCTTGGTaGGCAACAAGAAGCCCATCT +
Preference number: 2 (lower is better)
Translates to: VQCLPHSTPNTDQSLVPANPSPW*ATRSPS
Trigger: AGATGGGCTTCTTGTTGCTCACCAAGGTGAAGGGTT...AGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635285.1
3UTR-3UTR TCA 90 bp TGGCCCCAGAATCCAGGCTCTTTAACCATTTCACAAAGCTGCCCACAAATAGCCCGAGAAAAGGGAGGTTaGAGGAGTTCCAAGGACATT +
Preference number: 2 (lower is better)
Translates to: WPQNPGSLTISQSCPQIAREKGG*RSSKDI
Trigger: AATGTCCTTGGAACTCCTTCAACCTCCCTTTTCTCG...GGCTATTTGTGGGCAGCTTTGTGAAATGGTTAAAGAGCCTGGATTCTGGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
3UTR-3UTR CCA 90 bp TCAGCCACTTCAAGGACCTCCATTTTTCCCACACCCTGGATCATTAATGATATGTCCAGTGTGTCCTTATaGAGGTGGAGGGACTGCTGG +
Preference number: 2 (lower is better)
Translates to: SATSRTSIFPTPWIINDMSSVSL*RWRDCW
Trigger: CCAGCAGTCCCTCCACCTCCATAAGGACACACTGGA...CATATCATTAATGATCCAGGGTGTGGGAAAAATGGAGGTCCTTGAAGTGGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
3UTR-3UTR CCA 90 bp TCAGCCACTTCAAGGACCTCCATTTTTCCCACACCCTGGATCATTAATGATATGATGAGGGAGGCATTCTaGACCACCAGCACAGCTAGG +
Preference number: 2 (lower is better)
Translates to: SATSRTSIFPTPWIINDMMREAF*TTSTAR
Trigger: CCTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCAT...CATATCATTAATGATCCAGGGTGTGGGAAAAATGGAGGTCCTTGAAGTGGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR CCA 90 bp ACAGTGGACAGCACAATGGACAGGGAGGTGGCAAAGCCCTTGAGGATATTGTCAGAGATGGCAACATACTaGAGGTTATTCTGCAAGGTG +
Preference number: 2 (lower is better)
Translates to: TVDSTMDREVAKPLRILSEMATY*RLFCKV
Trigger: CACCTTGCAGAATAACCTCCAGTATGTTGCCATCTC...TGACAATATCCTCAAGGGCTTTGCCACCTCCCTGTCCATTGTGCTGTCCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR TCA 90 bp ACAGTTAAGGGGTTAATAAGCTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCCCTACATCTGGCAACTaGCAGTGTCTTAAATACAAT +
Preference number: 2 (lower is better)
Translates to: TVKGLISFGERRRQVPQFPTSGN*QCLKYN
Trigger: ATTGTATTTAAGACACTGTCAGTTGCCAGATGTAGG...GAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAGCTTATTAACCCCTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
3UTR-3UTR GCA 90 bp GCTCTATTTACATATAGCAAAGACAGCCCAGGCATCTTCCATGCACACACACACTCATTCCTGAAGAGCTaGGGGAGTTTTGTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: ALFTYSKDSPGIFHAHTHSFLKS*GSFVQC
Trigger: ACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGA...GTGTGTGTGTGCATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAATAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
3UTR-3UTR CCA 90 bp AAAGATCCAATGGCTCTATTTACATATAGCAAAGACAGCCCAGGCATCTTCCATTCCAGTGTGTCCTTATaGAGGTGGAGGGACTGCTGG +
Preference number: 2 (lower is better)
Translates to: KDPMALFTYSKDSPGIFHSSVSL*RWRDCW
Trigger: CCAGCAGTCCCTCCACCTCCATAAGGACACACTGGA...ATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAATAGAGCCATTGGATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
3UTR-3UTR TCA 90 bp AAAGATCCAATGGCTCTATTTACATATAGCAAAGACAGCCCAGGCATCTTCCATACGGAACTAGTAACATaGTCCAGAGCGGTGGTAAGG +
Preference number: 2 (lower is better)
Translates to: KDPMALFTYSKDSPGIFHTELVT*SRAVVR
Trigger: CCTTACCACCGCTCTGGATCATGTTACTAGTTCCGT...ATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAATAGAGCCATTGGATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
3UTR-3UTR TCA 90 bp TATCCTAGCATCTCAGTGAACAGGCATTACTATTTCCACCCCCAATTTTCACAGCGAGAAAAGGGAGGTTaGAGGAGTTCCAAGGACATT +
Preference number: 2 (lower is better)
Translates to: YPSISVNRHYYFHPQFSQREKGG*RSSKDI
Trigger: AATGTCCTTGGAACTCCTTCAACCTCCCTTTTCTCG...CTGTGAAAATTGGGGGTGGAAATAGTAATGCCTGTTCACTGAGATGCTAGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
3UTR-3UTR CCA 90 bp CCAAAAATAAGCCTACATCTGGCAACTGACAGTGTCTTAAATACAATGAGATTCGAAGGCCTCAAACTATaGGCAACTGAACCCCACAGG +
Preference number: 2 (lower is better)
Translates to: PKISLHLATDSVLNTMRFEGLKL*ATEPHR
Trigger: CCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTC...GAATCTCATTGTATTTAAGACACTGTCAGTTGCCAGATGTAGGCTTATTTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
3UTR-3UTR TCA 90 bp TTTAAGTATCCTAGCATCTCAGTGAACAGGCATTACTATTTCCACCCCCAATTTCGAGAAAAGGGAGGTTaGAGGAGTTCCAAGGACATT +
Preference number: 2 (lower is better)
Translates to: FKYPSISVNRHYYFHPQFREKGG*RSSKDI
Trigger: AATGTCCTTGGAACTCCTTCAACCTCCCTTTTCTCG...AAATTGGGGGTGGAAATAGTAATGCCTGTTCACTGAGATGCTAGGATACTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
3UTR-3UTR GCA 90 bp GGTCAGAAAGCTACACGTGGACTAAATAAATACAACATCTTTATTTGGCATTGGAGGAAGAGAACCAGGTaGTTCACGTTACCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: GQKATRGLNKYNIFIWHWRKRTR*FTLPLF
Trigger: GAAGAGGGGTAACGTGAAGCACCTGGTTCTCTTCCT...CCAATGCCAAATAAAGATGTTGTATTTATTTAGTCCACGTGTAGCTTTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR TCA 90 bp TCAAAAATAAAGATCCAATGGCTCTATTTACATATAGCAAAGACAGCCCAGGCACCTACATCTGGCAACTaGCAGTGTCTTAAATACAAT +
Preference number: 2 (lower is better)
Translates to: SKIKIQWLYLHIAKTAQAPTSGN*QCLKYN
Trigger: ATTGTATTTAAGACACTGTCAGTTGCCAGATGTAGG...TGCCTGGGCTGTCTTTGCTATATGTAAATAGAGCCATTGGATCTTTATTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
3UTR CCA 72 bp AGTGGCCGTGGGCCTCCCCCACCGGCTTGCTGTGCCTaGACAATGGCGACGCCAGTGAAGAGGAGCAGCAGG +
Preference number: 3 (lower is better)
Translates to: SGRGPPPPACCA*TMATPVKRSSR
Trigger: CCTGCTGCTCCTCTTCACTGGCGTCGCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGGCCCACGGCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR GCA 72 bp ATCCAGTGGCCGTGGGCCTCCCCCACCGGCTTGCTGTaGCTGGACAATGGCGACGCCAGTGAAGAGGAGCAG +
Preference number: 3 (lower is better)
Translates to: IQWPWASPTGLL*LDNGDASEEEQ
Trigger: CTGCTCCTCTTCACTGGCGTCGCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGGCCCACGGCCACTGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR CAA 90 bp CTGGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGCCGGAGGGTGGCGACTaGGGTCCTGCAGATGCCCAA +
Preference number: 3 (lower is better)
Translates to: LGGTLPDEKPPEEGTGSGPEGGD*GPADAQ
Trigger: TTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCGG...CCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR GCA 72 bp GCGACGCCAGTGAAGAGGAGCAGCAGGGAGGCCCACTaGAGCCGGGAAAGGCTGCGATTCAGCATGAGCACG +
Preference number: 3 (lower is better)
Translates to: ATPVKRSSREAH*SRERLRFSMST
Trigger: CGTGCTCATGCTGAATCGCAGCCTTTCCCGGCTGCAGTGGGCCTCCCTGCTGCTCCTCTTCACTGGCGTCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR TCA 72 bp CAACCACAGCCACCAGTAGCCCGCCGAAGGCCTGGTTaGGCACCACGCCCCAGACAGCAGGTGTGTACCCAA +
Preference number: 3 (lower is better)
Translates to: QPQPPVARRRPG*APRPRQQVCTQ
Trigger: TTGGGTACACACCTGCTGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGGGCTACTGGTGGCTGTGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR CCA 72 bp TTTGGCAGAAAGGGCTCCGTGATGAGGTCTCCACGGTaGGAAGACAGCTGCGGTGGTGGTGGCTGCCCGGGA +
Preference number: 3 (lower is better)
Translates to: FGRKGSVMRSPR*EDSCGGGGCPG
Trigger: TCCCGGGCAGCCACCACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCATCACGGAGCCCTTTCTGCCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413561.7
ENST00000635628.1
3UTR-3UTR CAA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGCCGGAGGGTGGCGACTaGGGTCCTGCAGATGCCCAA +
Preference number: 3 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKPEGGD*GPADAQ
Trigger: TTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCGG...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR-3UTR CAA 90 bp CCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCGGAGGGTGGCGACTaGGGTCCTGCAGATGCCCAA +
Preference number: 3 (lower is better)
Translates to: PTLPPKRLEGAEAAALKPPEGGD*GPADAQ
Trigger: TTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCGG...GGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR-3UTR CAA 90 bp CTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCATCAATCCCAAGACACCCCCGCCGAAGAGGCCCAGTaGCAGGTTGCGCAGCCACAC +
Preference number: 3 (lower is better)
Translates to: LWGAQEAGSTVHQSQDTPAEEAQ*QVAQPH
Trigger: GTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGGC...GGGGGTGTCTTGGGATTGATGAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR CCA 72 bp CATGACCACAGCAGTGGTGGCAAAGAAGCGGTCCCCTaGCAACGTGCGGGCGTAGCGGATGCTGAGGATGAG +
Preference number: 3 (lower is better)
Translates to: HDHSSGGKEAVP*QRAGVADAEDE
Trigger: CTCATCCTCAGCATCCGCTACGCCCGCACGTTGCCAGGGGACCGCTTCTTTGCCACCACTGCTGTGGTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR CCA 72 bp TTGACAACCACAGCCACCAGTAGCCCGCCGAAGGCCTaGTTGAGCACCACGCCCCAGACAGCAGGTGTGTAC +
Preference number: 3 (lower is better)
Translates to: LTTTATSSPPKA*LSTTPQTAGVY
Trigger: GTACACACCTGCTGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGGGCTACTGGTGGCTGTGGTTGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR CAA 90 bp GGTAAGGGAGGAGAGAAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCCGGAGGGTGGCGACTaGGGTCCTGCAGATGCCCAA +
Preference number: 3 (lower is better)
Translates to: GKGGEKASNYGQLNPTGRPEGGD*GPADAQ
Trigger: TTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCGG...CCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTCTCTCCTCCCTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR CAA 90 bp AAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGCCGGAGGGTGGCGACTaGGGTCCTGCAGATGCCCAA +
Preference number: 3 (lower is better)
Translates to: KSCGSFVQCVLMEVEGLLPEGGD*GPADAQ
Trigger: TTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCGG...CAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR TCA 72 bp AGGCCCACTGCAGCCGGGAAAGGCTGCGATTCAGCATaGGCACGGAGAACAGCGCTGTGGTCAGGATCTTCA +
Preference number: 3 (lower is better)
Translates to: RPTAAGKGCDSA*ARRTALWSGSS
Trigger: TGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCTTTCCCGGCTGCAGTGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634665.1
ENST00000635628.1
3UTR TCA 72 bp GCAGGTTGCGCAGCCACACGGAGCCTGAGCTGCCTTTaGGGATCTTCTCAAAGTAGACACCTGCGAAGCCGG +
Preference number: 3 (lower is better)
Translates to: AGCAATRSLSCL*GSSQSRHLRSR
Trigger: CCGGCTTCGCAGGTGTCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGCTCCGTGTGGCTGCGCAACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR CAA 90 bp AAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGCCGGAGGGTGGCGACTaGGGTCCTGCAGATGCCCAA +
Preference number: 3 (lower is better)
Translates to: KASNYGQLNPTGRHRSFLPEGGD*GPADAQ
Trigger: TTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCGG...CAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
3UTR TCA 72 bp GAGGCCCAGTTGCAGGTTGCGCAGCCACACGGAGCCTaGGCTGCCTTTGAGGATCTTCTCAAAGTAGACACC +
Preference number: 3 (lower is better)
Translates to: EAQLQVAQPHGA*AAFEDLLKVDT
Trigger: GGTGTCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR CCA 72 bp CCACGTGGAAGCCAAAGAGGCGAATGGAGGCAACAGTaGACAGCACAATGGACAGGGAGGTGGCAAAGCCCT +
Preference number: 3 (lower is better)
Translates to: PRGSQRGEWRQQ*TAQWTGRWQSP
Trigger: AGGGCTTTGCCACCTCCCTGTCCATTGTGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCTTCCACGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR CAA 90 bp CCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAAAGAGCTGCGGGAGTTTaGTCCAGTGTGTCCTTATGG +
Preference number: 3 (lower is better)
Translates to: PPTLPPKRLEGAEAAALKRAAGV*SSVSLW
Trigger: CCATAAGGACACACTGGACAAAACTCCCGCAGCTCT...TTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR-3UTR CAA 90 bp AAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACCCGGAGGGTGGCGACTaGGGTCCTGCAGATGCCCAA +
Preference number: 3 (lower is better)
Translates to: KKPIFKVSRKLAQGHTKDPEGGD*GPADAQ
Trigger: TTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCGG...GTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
3UTR TCA 72 bp CCCAGCTCTAGTCCCACACCCCTCCAGAAGTCTCAGTaGCCTGGGAGAAAAGACCATCTCCCAAACCCAGAG +
Preference number: 3 (lower is better)
Translates to: PSSSPTPLQKSQ*PGRKDHLPNPE
Trigger: CTCTGGGTTTGGGAGATGGTCTTTTCTCCCAGGTCACTGAGACTTCTGGAGGGGTGTGGGACTAGAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR GCA 72 bp GTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTaGTGGGAGGGACTCTCCCAGACGAGAAACCTCCAG +
Preference number: 3 (lower is better)
Translates to: VLSSVSLWRWRD*WEGLSQTRNLQ
Trigger: CTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCCAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR CCA 72 bp ACGAGTCCAGCGCCAAGGGCAAATAATGGGTCCACGTaGAAGCCAAAGAGGCGAATGGAGGCAACAGTGGAC +
Preference number: 3 (lower is better)
Translates to: TSPAPRANNGST*KPKRRMEATVD
Trigger: GTCCACTGTTGCCTCCATTCGCCTCTTTGGCTTCCACGTGGACCCATTATTTGCCCTTGGCGCTGGACTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR CAA 90 bp TATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGAGCTGCGGGAGTTTaGTCCAGTGTGTCCTTATGG +
Preference number: 3 (lower is better)
Translates to: YGQLNPTGRHRSFLKSCGRAAGV*SSVSLW
Trigger: CCATAAGGACACACTGGACAAAACTCCCGCAGCTCT...CCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR CAA 90 bp GGAGAGAAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCAAATACTGATCAGAGTTaGGTCCCAGCTGGGCCAAGG +
Preference number: 3 (lower is better)
Translates to: GEKASNYGQLNPTGRHRSNTDQS*VPAGPR
Trigger: CCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATT...TGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR GCA 72 bp GAGGTTATTCTGCAAGGTGTAGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCACATACTGCACCAGGAC +
Preference number: 3 (lower is better)
Translates to: EVILQGVDERGH*ELERVHILHQD
Trigger: GTCCTGGTGCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGAATAACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR CCA 72 bp CAAATAATGGGTCCACGTGGAAGCCAAAGAGGCGAATaGAGGCAACAGTGGACAGCACAATGGACAGGGAGG +
Preference number: 3 (lower is better)
Translates to: QIMGPRGSQRGE*RQQWTAQWTGR
Trigger: CCTCCCTGTCCATTGTGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCTTCCACGTGGACCCATTATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR CAA 90 bp AGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAAGCCCTTGAGGATATaGTCAGCGTACTTGACAACC +
Preference number: 3 (lower is better)
Translates to: SWAKGKKRERGQANVFNPKPLRI*SAYLTT
Trigger: GGTTGTCAAGTACGCTGACAATATCCTCAAGGGCTT...GGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR CCA 72 bp GTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTaGTCCCAGCTGGGCCAAGGGCAAGAAGAGAGAACG +
Preference number: 3 (lower is better)
Translates to: VYLTLPLILIRV*SQLGQGQEERT
Trigger: CGTTCTCTCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR-3UTR CAA 90 bp AATAAGCTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCATCAATCCCAAGACAGAGCTGCGGGAGTTTaGTCCAGTGTGTCCTTATGG +
Preference number: 3 (lower is better)
Translates to: NKLWGAQEAGSTVHQSQDRAAGV*SSVSLW
Trigger: CCATAAGGACACACTGGACAAAACTCCCGCAGCTCT...GTCTTGGGATTGATGAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAGCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
3UTR-3UTR CAA 90 bp AGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGGCTAGGAACCCTTCAATATTGTCAGCGTACTaGACAACCACAGCCACCAGT +
Preference number: 3 (lower is better)
Translates to: RENEARPMSSIPAARNPSILSAY*TTTATS
Trigger: ACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATAT...TGAAGGGTTCCTAGCCGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR CAA 90 bp AAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACAGAGCTGCGGGAGTTTaGTCCAGTGTGTCCTTATGG +
Preference number: 3 (lower is better)
Translates to: KKPIFKVSRKLAQGHTKDRAAGV*SSVSLW
Trigger: CCATAAGGACACACTGGACAAAACTCCCGCAGCTCT...GTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
3UTR TCA 72 bp GGGGTGCCTCACACAGCCAGACGGATATCAAGAGTATaGTTGGTAGCTTTTTCCTCTCCTAGACATCTCCAA +
Preference number: 3 (lower is better)
Translates to: GVPHTARRISRV*LVAFSSPRHLQ
Trigger: TTGGAGATGTCTAGGAGAGGAAAAAGCTACCAATCATACTCTTGATATCCGTCTGGCTGTGTGAGGCACCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
3UTR CCA 72 bp CTCACAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTaGCCCAAGGCCACACAAAAGACGGAACTAGTAACA +
Preference number: 3 (lower is better)
Translates to: LTRSPSSRYQGS*PKATQKTELVT
Trigger: TGTTACTAGTTCCGTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
3UTR CCA 72 bp GCAACAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTaGCCCAAGGCCACACAAAAGACGGAACTAGTAACA +
Preference number: 3 (lower is better)
Translates to: ATRSPSSRYQGS*PKATQKTELVT
Trigger: TGTTACTAGTTCCGTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635285.1
3UTR-3UTR CAA 90 bp TCAAAAATAAAGATCCAATGGCTCTATTTACATATAGCAAAGACAGCCCAGGCAAGGCAGGTGAGACCTTaGAGCACTTCCGCCATGACC +
Preference number: 3 (lower is better)
Translates to: SKIKIQWLYLHIAKTAQARQVRP*STSAMT
Trigger: GGTCATGGCGGAAGTGCTCAAAGGTCTCACCTGCCT...TGCCTGGGCTGTCTTTGCTATATGTAAATAGAGCCATTGGATCTTTATTTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635628.1
3UTR-3UTR CAA 90 bp CTCTTTAACCATTTCACAAAGCTGCCCACAAATAGCCTAAAGCTTATCTGTCACACGAGAAAAGGGAGGTaGAAGGAGTTCCAAGGACAT +
Preference number: 3 (lower is better)
Translates to: LFNHFTKLPTNSLKLICHTRKGR*KEFQGH
Trigger: ATGTCCTTGGAACTCCTTCAACCTCCCTTTTCTCGT...GTGACAGATAAGCTTTAGGCTATTTGTGGGCAGCTTTGTGAAATGGTTAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
3UTR-3UTR CAA 90 bp TCTTTTAAGTATCCTAGCATCTCAGTGAACAGGCATTACTATTTCCACCCCCAAACGAGAAAAGGGAGGTaGAAGGAGTTCCAAGGACAT +
Preference number: 3 (lower is better)
Translates to: SFKYPSISVNRHYYFHPQTRKGR*KEFQGH
Trigger: ATGTCCTTGGAACTCCTTCAACCTCCCTTTTCTCGT...TTGGGGGTGGAAATAGTAATGCCTGTTCACTGAGATGCTAGGATACTTAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
3UTR CCA 72 bp TCAGCCACTTCAAGGACCTCCATTTTTCCCACACCCTaGATCATTAATGATATGATTACACCACAAATCCCA +
Preference number: 3 (lower is better)
Translates to: SATSRTSIFPTP*IINDMITPQIP
Trigger: TGGGATTTGTGGTGTAATCATATCATTAATGATCCAGGGTGTGGGAAAAATGGAGGTCCTTGAAGTGGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
3UTR TCA 72 bp CTAGACATCTCCAAAAATAAGCCTACATCTGGCAACTaGCAGTGTCTTAAATACAATGAGATTCAGCCACTT +
Preference number: 3 (lower is better)
Translates to: LDISKNKPTSGN*QCLKYNEIQPL
Trigger: AAGTGGCTGAATCTCATTGTATTTAAGACACTGTCAGTTGCCAGATGTAGGCTTATTTTTGGAGATGTCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR CCA 90 bp CCTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCCAGCTGCGGTGGTGGTaGCTGCCCGGGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PPGEGGHPTRKGSRDTQLQLRWW*LPGRLL
Trigger: CAGCAGCCTCCCGGGCAGCCACCACCACCGCAGCTG...GAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGCTGATCCAGTGGCCGTaGGCCTCCCCCACCGGCTTG +
Preference number: 4 (lower is better)
Translates to: GRDSPRRETSRRGHRVGELIQWP*ASPTGL
Trigger: CAAGCCGGTGGGGGAGGCCCACGGCCACTGGATCAG...CTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTGGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGACAGCTGCGGTGGTaGTGGCTGCCCGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGGTLPDEKPPEEGTGSGRQLRW*WLPGRL
Trigger: CAGCCTCCCGGGCAGCCACCACCACCGCAGCTGTCT...CCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGGAAGACAGCTGCGGTaGTGGTGGCTGCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GRDSPRRETSRRGHRVGEGRQLR*WWLPGR
Trigger: CCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCC...CTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGGACCTGCCCCAGGGTTCTaGTCCAGTGGCCGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RDSPRRETSRRGHRVGEGPAPGF*SSGRGP
Trigger: AGGCCCACGGCCACTGGATCAGAACCCTGGGGCAGG...TCCCTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTCGCCGAAGGCCTGGTTaGGCACCACGCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: LQGKGVTLPGRVHVTPSSRRRPG*APRPRQ
Trigger: CTGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCG...AGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGAGCAGGGAGGCCCACTaGAGCCGGGAAAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: GRDSPRRETSRRGHRVGESREAH*SRERLR
Trigger: TCGCAGCCTTTCCCGGCTGCAGTGGGCCTCCCTGCT...CTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCCCCACCGGCTTGCTGTaGCTGGACAATGGCGACGCC +
Preference number: 4 (lower is better)
Translates to: PPGEGGHPTRKGSRDTQLPTGLL*LDNGDA
Trigger: GGCGTCGCCATTGTCCAGGCACAGCAAGCCGGTGGG...GAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGCCCACCGGCTTGCTGTaGCTGGACAATGGCGACGCC +
Preference number: 4 (lower is better)
Translates to: GRDSPRRETSRRGHRVGEPTGLL*LDNGDA
Trigger: GGCGTCGCCATTGTCCAGGCACAGCAAGCCGGTGGG...CTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCCCTCCCCCACCGGCTTaGTGTGCCTGGACAATGGCG +
Preference number: 4 (lower is better)
Translates to: PPGEGGHPTRKGSRDTQLPPPPA*CAWTMA
Trigger: CGCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGG...GAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCGACGGCTGCCAGGCCTaGCCCAGGGTTCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: PPGEGGHPTRKGSRDTQLDGCQA*PRVLIQ
Trigger: CTGGATCAGAACCCTGGGGCAGGCCTGGCAGCCGTC...GAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCGGAGGCCACGACGGCTaGCAGGCCTGCCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: VTLPGRVHVTPSSSPTPLGGHDG*QACPRV
Trigger: AACCCTGGGGCAGGCCTGGCAGCCGTCGTGGCCTCC...GAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCGGCCCAGTTGCAGGTTaGGCAGCCACACGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PPGEGGHPTRKGSRDTQLGPVAG*AATRSL
Trigger: CAGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCC...GAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGCTGCGGTGGTGGTaGCTGCCCGGGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VTLPGRVHVTPSSSPTPLQLRWW*LPGRLL
Trigger: CAGCAGCCTCCCGGGCAGCCACCACCACCGCAGCTG...GAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR CAA 72 bp GTTCTGATCCAGTGGCCGTGGGCCTCCCCCACCGGCTaGCTGTGCCTGGACAATGGCGACGCCAGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: VLIQWPWASPTG*LCLDNGDASEE
Trigger: CTCTTCACTGGCGTCGCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGGCCCACGGCCACTGGATCAGAAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR TCA 90 bp GTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCGCCGAAGGCCTGGTTaGGCACCACGCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: VTLPGRVHVTPSSSPTPLRRRPG*APRPRQ
Trigger: CTGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCG...GAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGGGAGGCCACGACGGCTaGCAGGCCTGCCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GPRARRENEARPMSSIPAGGHDG*QACPRV
Trigger: AACCCTGGGGCAGGCCTGGCAGCCGTCGTGGCCTCC...CGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp ATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAGGAGGCCACGACGGCTaGCAGGCCTGCCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: IPPTLPPKRLEGAEAAALGGHDG*QACPRV
Trigger: AACCCTGGGGCAGGCCTGGCAGCCGTCGTGGCCTCC...TAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGGGAGGCCACGACGGCTaGCAGGCCTGCCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKGGHDG*QACPRV
Trigger: AACCCTGGGGCAGGCCTGGCAGCCGTCGTGGCCTCC...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTGGAGGCCACGACGGCTaGCAGGCCTGCCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAAGGHDG*QACPRV
Trigger: AACCCTGGGGCAGGCCTGGCAGCCGTCGTGGCCTCC...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTGGCCCAGTTGCAGGTTaGGCAGCCACACGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LQGKGVTLPGRVHVTPSSGPVAG*AATRSL
Trigger: CAGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCC...AGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CTGGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGCCGAAGAGGCCCAGTTaGAGGTTGCGCAGCCACACG +
Preference number: 4 (lower is better)
Translates to: LGGTLPDEKPPEEGTGSGPKRPS*RLRSHT
Trigger: CGTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGG...CCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGCCGAAGAGGCCCAGTTaGAGGTTGCGCAGCCACACG +
Preference number: 4 (lower is better)
Translates to: GRDSPRRETSRRGHRVGEPKRPS*RLRSHT
Trigger: CGTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGG...CTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCCCAGGCCCAGTGCTGTaGCGAAGAGGCCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: PPGEGGHPTRKGSRDTQLPGPVL*RRGPVA
Trigger: TGCAACTGGGCCTCTTCGGCACAGCACTGGGCCTGG...GAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CTGGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGACCAGCCCCAACCGCTaGCATGTTGGCATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LGGTLPDEKPPEEGTGSGTSPNR*HVGICP
Trigger: CGGGCAGATGCCAACATGGCAGCGGTTGGGGCTGGT...CCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000445167.7
ENST00000635285.1
CDS-3UTR CCA 90 bp GTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCTGATCCAGTGGCCGTaGGCCTCCCCCACCGGCTTG +
Preference number: 4 (lower is better)
Translates to: VTLPGRVHVTPSSSPTPLLIQWP*ASPTGL
Trigger: CAAGCCGGTGGGGGAGGCCCACGGCCACTGGATCAG...GAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCAGCTGCGGTGGTGGTaGCTGCCCGGGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTQLRWW*LPGRLL
Trigger: CAGCAGCCTCCCGGGCAGCCACCACCACCGCAGCTG...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGAGACAGCTGCGGTGGTaGTGGCTGCCCGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGRQLRW*WLPGRL
Trigger: CAGCCTCCCGGGCAGCCACCACCACCGCAGCTGTCT...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGAGACAGCTGCGGTGGTaGTGGCTGCCCGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ASKEVRGSRGGSSKTPSRRQLRW*WLPGRL
Trigger: CAGCCTCCCGGGCAGCCACCACCACCGCAGCTGTCT...CCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTGGAAGACAGCTGCGGTaGTGGTGGCTGCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: QGKGVTLPGRVHVTPSSSGRQLR*WWLPGR
Trigger: CCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCC...ACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGGGAAGACAGCTGCGGTaGTGGTGGCTGCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGGRQLR*WWLPGR
Trigger: CCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCC...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCCGGAGGGTGGCGACTTaGGTCCTGCAGATGCCCAAC +
Preference number: 4 (lower is better)
Translates to: PPGEGGHPTRKGSRDTQLRRVAT*VLQMPN
Trigger: GTTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCG...GAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCAGGCCCCGGAGGGTaGCGACTTGGGTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QGKGVTLPGRVHVTPSSSPGPGG*RLGSCR
Trigger: TCTGCAGGACCCAAGTCGCCACCCTCCGGGGCCTGG...ACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGCCAGGCCCCGGAGGGTaGCGACTTGGGTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ASKEVRGSRGGSSKTPSRPGPGG*RLGSCR
Trigger: TCTGCAGGACCCAAGTCGCCACCCTCCGGGGCCTGG...CCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
3UTR CAA 72 bp ACAACCACAGCCACCAGTAGCCCGCCGAAGGCCTGGTaGAGCACCACGCCCCAGACAGCAGGTGTGTACCCA +
Preference number: 4 (lower is better)
Translates to: TTTATSSPPKAW*STTPQTAGVYP
Trigger: TGGGTACACACCTGCTGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGGGCTACTGGTGGCTGTGGTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR TCA 90 bp CCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCTGCCCCAGGGTTCTaGTCCAGTGGCCGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPTLPPKRLEGAEAAALKPAPGF*SSGRGP
Trigger: AGGCCCACGGCCACTGGATCAGAACCCTGGGGCAGG...TTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCCTGCCCCAGGGTTCTaGTCCAGTGGCCGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAAPAPGF*SSGRGP
Trigger: AGGCCCACGGCCACTGGATCAGAACCCTGGGGCAGG...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp ATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTACGCCGAAGGCCTGGTTaGGCACCACGCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: IPPTLPPKRLEGAEAAALRRRPG*APRPRQ
Trigger: CTGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCG...TAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCCGCCGAAGGCCTGGTTaGGCACCACGCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: NPASKEVRGSRGGSSKTPRRRPG*APRPRQ
Trigger: CTGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCG...GGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCGGTCCCCGGCTCCAATaGACCCGCGGAAACCGCCCC +
Preference number: 4 (lower is better)
Translates to: PAGPRARRENEARPMSSIGPRLQ*TRGNRP
Trigger: GGGGCGGTTTCCGCGGGTGCATTGGAGCCGGGGACC...GATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGCCCACCGGCTTGCTGTaGCTGGACAATGGCGACGCC +
Preference number: 4 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGPTGLL*LDNGDA
Trigger: GGCGTCGCCATTGTCCAGGCACAGCAAGCCGGTGGG...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGCCTCCCCCACCGGCTTaGTGTGCCTGGACAATGGCG +
Preference number: 4 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGPPPPA*CAWTMA
Trigger: CGCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGG...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGACGGCTGCCAGGCCTaGCCCAGGGTTCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: ASKEVRGSRGGSSKTPSRDGCQA*PRVLIQ
Trigger: CTGGATCAGAACCCTGGGGCAGGCCTGGCAGCCGTC...CCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGGGCCCAGTTGCAGGTTaGGCAGCCACACGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGGPVAG*AATRSL
Trigger: CAGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCC...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTCCGAAGAGGCCCAGTTaGAGGTTGCGCAGCCACACG +
Preference number: 4 (lower is better)
Translates to: LQGKGVTLPGRVHVTPSSPKRPS*RLRSHT
Trigger: CGTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGG...AGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp ACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTTGCCATGTTGGCATCTaGCCGGCCCGTCCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TLPPKRLEGAEAAALKPPCHVGI*PARPLG
Trigger: GCCGAGGGGACGGGCCGGGCAGATGCCAACATGGCA...AGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000445167.7
CDS-3UTR CCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCGCCTGTGAGCCGCACTaGCGGTCCCCGGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTACEPH*RSPAPM
Trigger: CATTGGAGCCGGGGACCGCCAGTGCGGCTCACAGGC...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000445167.7
ENST00000635285.1
CDS-3UTR CCA 90 bp AGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGGACCGGCTTGCTGTGCCTaGACAATGGCGACGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RDSPRRETSRRGHRVGEGPACCA*TMATPV
Trigger: CACTGGCGTCGCCATTGTCCAGGCACAGCAAGCCGG...TCCCTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCTGATCCAGTGGCCGTaGGCCTCCCCCACCGGCTTG +
Preference number: 4 (lower is better)
Translates to: PTLPPKRLEGAEAAALKPLIQWP*ASPTGL
Trigger: CAAGCCGGTGGGGGAGGCCCACGGCCACTGGATCAG...GGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGCTGATCCAGTGGCCGTaGGCCTCCCCCACCGGCTTG +
Preference number: 4 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKLIQWP*ASPTGL
Trigger: CAAGCCGGTGGGGGAGGCCCACGGCCACTGGATCAG...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGAGGGTTCTGATCCAGTaGCCGTGGGCCTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGRVLIQ*PWASPT
Trigger: GGTGGGGGAGGCCCACGGCCACTGGATCAGAACCCT...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTGCAGCCGGGAAAGGCTGCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTAGGGTTCTGATCCAGTaGCCGTGGGCCTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: LQPGKAAIQHEHGEQRCGRVLIQ*PWASPT
Trigger: GGTGGGGGAGGCCCACGGCCACTGGATCAGAACCCT...ACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCTTTCCCGGCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR CCA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGAGCCCGCCGAAGGCCTaGTTGAGCACCACGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKSPPKA*LSTTPQ
Trigger: CTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGGGCT...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAAAGCCCGCCGAAGGCCTaGTTGAGCACCACGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PPTLPPKRLEGAEAAALKSPPKA*LSTTPQ
Trigger: CTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGGGCT...TTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTAGCCCGCCGAAGGCCTaGTTGAGCACCACGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAASPPKA*LSTTPQ
Trigger: CTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGGGCT...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTGCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTCAGCTGGCAGCTGCGGTGGTGGTaGCTGCCCGGGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LRFSMSTENSAVVRIFSWQLRWW*LPGRLL
Trigger: CAGCAGCCTCCCGGGCAGCCACCACCACCGCAGCTG...CCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR CCA 90 bp CCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCAGACAGCTGCGGTGGTaGTGGCTGCCCGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PTLPPKRLEGAEAAALKPRQLRW*WLPGRL
Trigger: CAGCCTCCCGGGCAGCCACCACCACCGCAGCTGTCT...GGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCAGACAGCTGCGGTGGTaGTGGCTGCCCGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: NPASKEVRGSRGGSSKTPRQLRW*WLPGRL
Trigger: CAGCCTCCCGGGCAGCCACCACCACCGCAGCTGTCT...GGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCAGACAGCTGCGGTGGTaGTGGCTGCCCGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTRQLRW*WLPGRL
Trigger: CAGCCTCCCGGGCAGCCACCACCACCGCAGCTGTCT...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGGGAAGACAGCTGCGGTaGTGGTGGCTGCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKGRQLR*WWLPGR
Trigger: CCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCC...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAAGGAAGACAGCTGCGGTaGTGGTGGCTGCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: PPTLPPKRLEGAEAAALKGRQLR*WWLPGR
Trigger: CCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCC...TTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGGGAAGACAGCTGCGGTaGTGGTGGCTGCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GPRARRENEARPMSSIPAGRQLR*WWLPGR
Trigger: CCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCC...CGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGGACGGAGGGTGGCGACTTaGGTCCTGCAGATGCCCAAC +
Preference number: 4 (lower is better)
Translates to: RDSPRRETSRRGHRVGEGRRVAT*VLQMPN
Trigger: GTTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCG...TCCCTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCATCAATCCCAAGACACCCCCCCAGGCCCCGGAGGGTaGCGACTTGGGTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LWGAQEAGSTVHQSQDTPPGPGG*RLGSCR
Trigger: TCTGCAGGACCCAAGTCGCCACCCTCCGGGGCCTGG...GGGGGTGTCTTGGGATTGATGAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR CCA 90 bp CCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCAGGCCCCGGAGGGTaGCGACTTGGGTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PTLPPKRLEGAEAAALKPPGPGG*RLGSCR
Trigger: TCTGCAGGACCCAAGTCGCCACCCTCCGGGGCCTGG...GGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTGGCTGCGATTCAGCATaGGCACGGAGAACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: LQGKGVTLPGRVHVTPSSGCDSA*ARRTAL
Trigger: CAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCC...AGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CCTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCCAGCCACACGGAGCCTaGGCTGCCTTTGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: PPGEGGHPTRKGSRDTQLQPHGA*AAFEDL
Trigger: AAGATCCTCAAAGGCAGCTCAGGCTCCGTGTGGCTG...GAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTGGTAGACAGCACCAATaGCGAGTCCAGCGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LQGKGVTLPGRVHVTPSSGRQHQ*RVQRQG
Trigger: CCCTTGGCGCTGGACTCGTCATTGGTGCTGTCTACC...AGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AAAGGGCTCCGTGATGAGGTCTCCACGGTGGGAAGACAGCTGCGGTGGTGGTGGGGTAGACAGCACCAATaGCGAGTCCAGCGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: KGLRDEVSTVGRQLRWWWGRQHQ*RVQRQG
Trigger: CCCTTGGCGCTGGACTCGTCATTGGTGCTGTCTACC...CCACCACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCATCACGGAGCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413561.7
ENST00000635628.1
CDS-3UTR TCA 90 bp GGTAAGGGAGGAGAGAAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGGCCGGGCCACCTGAGTaGAGGTGGAGCGAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GKGGEKASNYGQLNPTGRAGPPE*RWSESR
Trigger: CCGGCTCTCGCTCCACCTTCACTCAGGTGGCCCGGC...CCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTCTCTCCTCCCTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376521.6
CDS-3UTR TCA 90 bp CCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGGCTGGCAGGCGGGTTTCCTaGGCAAGTGAGGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: PRARRENEARPMSSIPAAGRRVS*ASEGGG
Trigger: ACCGCCGCCCTCACTTGCTCAGGAAACCCGCCTGCC...AGCCGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR GCA 90 bp CTGGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LGGTLPDEKPPEEGTGSGDERGH*ELERVH
Trigger: GTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATC...CCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp ACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTAGCAGGGAGGCCCACTaGAGCCGGGAAAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: TLPPKRLEGAEAAALKPPSREAH*SRERLR
Trigger: TCGCAGCCTTTCCCGGCTGCAGTGGGCCTCCCTGCT...AGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAAAGCAGGGAGGCCCACTaGAGCCGGGAAAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: PPTLPPKRLEGAEAAALKSREAH*SRERLR
Trigger: TCGCAGCCTTTCCCGGCTGCAGTGGGCCTCCCTGCT...TTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCTCCCCCACCGGCTTaGTGTGCCTGGACAATGGCG +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTPPPPA*CAWTMA
Trigger: CGCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGG...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCCCCACCGGCTTaGTGTGCCTGGACAATGGCG +
Preference number: 4 (lower is better)
Translates to: PTLPPKRLEGAEAAALKPPPPPA*CAWTMA
Trigger: CGCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGG...GGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp AACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCGACGGCTGCCAGGCCTaGCCCAGGGTTCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: NPASKEVRGSRGGSSKTPDGCQA*PRVLIQ
Trigger: CTGGATCAGAACCCTGGGGCAGGCCTGGCAGCCGTC...GGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCGACGGCTGCCAGGCCTaGCCCAGGGTTCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTDGCQA*PRVLIQ
Trigger: CTGGATCAGAACCCTGGGGCAGGCCTGGCAGCCGTC...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCCAGGCCCAGTGCTGTaGCGAAGAGGCCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: VTLPGRVHVTPSSSPTPLPGPVL*RRGPVA
Trigger: TGCAACTGGGCCTCTTCGGCACAGCACTGGGCCTGG...GAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTACCAGCCCCAACCGCTaGCATGTTGGCATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: QGKGVTLPGRVHVTPSSSTSPNR*HVGICP
Trigger: CGGGCAGATGCCAACATGGCAGCGGTTGGGGCTGGT...ACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000445167.7
ENST00000635285.1
CDS-3UTR GCA 90 bp AGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGGATGGCGACTTGGGTCCTaGAGATGCCCAACACCCTCC +
Preference number: 4 (lower is better)
Translates to: RDSPRRETSRRGHRVGEGWRLGS*RCPTPS
Trigger: GGAGGGTGTTGGGCATCTGCAGGACCCAAGTCGCCA...TCCCTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGGAGCTCCGCCTCCCATaGGACTGCTCGGGCAGACTG +
Preference number: 4 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKELRLP*DCSGRL
Trigger: CAGTCTGCCCGAGCAGTCGCATGGGAGGCGGAGCTC...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616181.5
CDS-3UTR CCA 90 bp CCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCGCCTGTGAGCCGCACTaGCGGTCCCCGGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: PAGPRARRENEARPMSSIACEPH*RSPAPM
Trigger: CATTGGAGCCGGGGACCGCCAGTGCGGCTCACAGGC...GATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
CDS-3UTR CCA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGAAAGAAGCGGTCCCCTaGCAACGTGCGGGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGKEAVP*QRAGVA
Trigger: CGCTACGCCCGCACGTTGCCAGGGGACCGCTTCTTT...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCAGGGTTCTGATCCAGTaGCCGTGGGCCTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: PTLPPKRLEGAEAAALKPRVLIQ*PWASPT
Trigger: GGTGGGGGAGGCCCACGGCCACTGGATCAGAACCCT...GGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp ACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTAGGGTTCTGATCCAGTaGCCGTGGGCCTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: TLPPKRLEGAEAAALKPPRVLIQ*PWASPT
Trigger: GGTGGGGGAGGCCCACGGCCACTGGATCAGAACCCT...AGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGCAGCTGCGGTGGTGGTaGCTGCCCGGGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KSCGSFVQCVLMEVEGLLQLRWW*LPGRLL
Trigger: CAGCAGCCTCCCGGGCAGCCACCACCACCGCAGCTG...CAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGATGAGGTCTCCACGGTaGGAAGACAGCTGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: GRDSPRRETSRRGHRVGEMRSPR*EDSCGG
Trigger: ACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCAT...CTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCAGGTGGAGGGACTGCTaGGAGGGACTCTCCCAGACG +
Preference number: 4 (lower is better)
Translates to: VTLPGRVHVTPSSSPTPLRWRDC*EGLSQT
Trigger: CGTCTGGGAGAGTCCCTCCCAGCAGTCCCTCCACCT...GAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACTGTCTCACCCGCACTaGCGGTCCCCGGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: KGVTLPGRVHVTPSSSPTLSHPH*RSPAPM
Trigger: CATTGGAGCCGGGGACCGCCAGTGCGGGTGAGACAG...TGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616181.5
ENST00000635628.1
CDS-3UTR TCA 90 bp GGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGTCTGCAAGGTGTAGATaGGAGAGGGCACTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: GRDSPRRETSRRGHRVGESARCR*ERALRA
Trigger: AGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGA...CTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTGGCTGCGATTCAGCATaGGCACGGAGAACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: QGKGVTLPGRVHVTPSSSGCDSA*ARRTAL
Trigger: CAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCC...ACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGCCTGCCCCAGGGTTCTaGTCCAGTGGCCGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: KSCGSFVQCVLMEVEGLLPAPGF*SSGRGP
Trigger: AGGCCCACGGCCACTGGATCAGAACCCTGGGGCAGG...CAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGGCTAGGAACCCTTCACGCCGAAGGCCTGGTTaGGCACCACGCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: RENEARPMSSIPAARNPSRRRPG*APRPRQ
Trigger: CTGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCG...TGAAGGGTTCCTAGCCGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCGGTAGACAGCACCAATaGCGAGTCCAGCGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: VTLPGRVHVTPSSSPTPLGRQHQ*RVQRQG
Trigger: CCCTTGGCGCTGGACTCGTCATTGGTGCTGTCTACC...GAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTGGTAGACAGCACCAATaGCGAGTCCAGCGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: QGKGVTLPGRVHVTPSSSGRQHQ*RVQRQG
Trigger: CCCTTGGCGCTGGACTCGTCATTGGTGCTGTCTACC...ACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGGACAGGAAGGGTTCACGTaGCACCCAGCTCTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: RDSPRRETSRRGHRVGEGQEGFT*HPALVP
Trigger: TGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTG...TCCCTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CTGGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGGGCATCGGTCATTCCTaGAGAGCTGCGGGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LGGTLPDEKPPEEGTGSGGIGHS*RAAGVL
Trigger: CAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCC...CCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGGCATCGGTCATTCCTaGAGAGCTGCGGGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: GRDSPRRETSRRGHRVGEGIGHS*RAAGVL
Trigger: CAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCC...CTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGGCTAGGAACCCTTCAGGCAGGCGGGTTTCCTaGGCAAGTGAGGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: RENEARPMSSIPAARNPSGRRVS*ASEGGG
Trigger: ACCGCCGCCCTCACTTGCTCAGGAAACCCGCCTGCC...TGAAGGGTTCCTAGCCGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR GCA 90 bp GGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTGGTCCCCGGCTCCAATaGACCCGCGGAAACCGCCCC +
Preference number: 4 (lower is better)
Translates to: GRHRSFLKSCGSFVQCVLGPRLQ*TRGNRP
Trigger: GGGGCGGTTTCCGCGGGTGCATTGGAGCCGGGGACC...AAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp AAAGGGCTCCGTGATGAGGTCTCCACGGTGGGAAGACAGCTGCGGTGGTGGTGGGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: KGLRDEVSTVGRQLRWWWDERGH*ELERVH
Trigger: GTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATC...CCACCACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCATCACGGAGCCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413561.7
ENST00000635628.1
CDS-3UTR GCA 90 bp CTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGAGCAGGGAGGCCCACTaGAGCCGGGAAAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: LGQGQEERTRPGQCLQSQSREAH*SRERLR
Trigger: TCGCAGCCTTTCCCGGCTGCAGTGGGCCTCCCTGCT...CTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp TATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGCAGGGAGGCCCACTaGAGCCGGGAAAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: YGQLNPTGRHRSFLKSCGSREAH*SRERLR
Trigger: TCGCAGCCTTTCCCGGCTGCAGTGGGCCTCCCTGCT...CCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCCACCGGCTTGCTGTaGCTGGACAATGGCGACGCC +
Preference number: 4 (lower is better)
Translates to: PAGPRARRENEARPMSSIPTGLL*LDNGDA
Trigger: GGCGTCGCCATTGTCCAGGCACAGCAAGCCGGTGGG...GATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGGACGGCTGCCAGGCCTaGCCCAGGGTTCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: LGQGQEERTRPGQCLQSQDGCQA*PRVLIQ
Trigger: CTGGATCAGAACCCTGGGGCAGGCCTGGCAGCCGTC...CTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCGACGGCTGCCAGGCCTaGCCCAGGGTTCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: PAGPRARRENEARPMSSIDGCQA*PRVLIQ
Trigger: CTGGATCAGAACCCTGGGGCAGGCCTGGCAGCCGTC...GATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp AGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCGGCCCAGTTGCAGGTTaGGCAGCCACACGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SWAKGKKRERGQANVFNPGPVAG*AATRSL
Trigger: CAGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCC...GGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp AGGTGCTTCACGTTACCCCTCTTCTGTGCGAAGAGCAGCAGCAGGCAGGTGAGAGGCCCAGTTGCAGGTTaGGCAGCCACACGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RCFTLPLFCAKSSSRQVRGPVAG*AATRSL
Trigger: CAGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCC...TCTCACCTGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGTAACGTGAAGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR GCA 90 bp AAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCGAAGAGGCCCAGTTaGAGGTTGCGCAGCCACACG +
Preference number: 4 (lower is better)
Translates to: KGVTLPGRVHVTPSSSPTPKRPS*RLRSHT
Trigger: CGTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGG...TGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCAGGCCCAGTGCTGTaGCGAAGAGGCCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: PTLPPKRLEGAEAAALKPPGPVL*RRGPVA
Trigger: TGCAACTGGGCCTCTTCGGCACAGCACTGGGCCTGG...GGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp AAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCAGGCCCAGTGCTGTaGCGAAGAGGCCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: KGVTLPGRVHVTPSSSPTPGPVL*RRGPVA
Trigger: TGCAACTGGGCCTCTTCGGCACAGCACTGGGCCTGG...TGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGGCTATGGCTTTGGCTaGACCTCGGGGAAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ASKEVRGSRGGSSKTPSRGYGFG*TSGKAG
Trigger: TCCAGCCTTCCCCGAGGTGCAGCCAAAGCCATAGCC...CCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376515.8
ENST00000445167.7
CDS-3UTR GCA 90 bp GTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCTGGCGACTTGGGTCCTaGAGATGCCCAACACCCTCC +
Preference number: 4 (lower is better)
Translates to: VTLPGRVHVTPSSSPTPLWRLGS*RCPTPS
Trigger: GGAGGGTGTTGGGCATCTGCAGGACCCAAGTCGCCA...GAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAAAAAGAAGCGGTCCCCTaGCAACGTGCGGGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: PPTLPPKRLEGAEAAALKKEAVP*QRAGVA
Trigger: CGCTACGCCCGCACGTTGCCAGGGGACCGCTTCTTT...TTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTGGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGCGGAGAACAGCGCTGTaGTCAGGATCTTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LGGTLPDEKPPEEGTGSGRRTAL*SGSSAG
Trigger: ACCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCG...CCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCGGCTTGCTGTGCCTaGACAATGGCGACGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PTLPPKRLEGAEAAALKPPACCA*TMATPV
Trigger: CACTGGCGTCGCCATTGTCCAGGCACAGCAAGCCGG...GGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCGGCTTGCTGTGCCTaGACAATGGCGACGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTPACCA*TMATPV
Trigger: CACTGGCGTCGCCATTGTCCAGGCACAGCAAGCCGG...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGGGAGCCGGCTTGCTGTGCCTaGACAATGGCGACGCCAGTG +
Preference number: 4 (lower is better)
Translates to: AAGVLSSVSLWRWRDCWEPACCA*TMATPV
Trigger: CACTGGCGTCGCCATTGTCCAGGCACAGCAAGCCGG...CTCCCAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCACTGATCCAGTGGCCGTaGGCCTCCCCCACCGGCTTG +
Preference number: 4 (lower is better)
Translates to: PHSTPNTDQSLVPAGPRALIQWP*ASPTGL
Trigger: CAAGCCGGTGGGGGAGGCCCACGGCCACTGGATCAG...TGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGGGTTCTGATCCAGTaGCCGTGGGCCTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: YGQLNPTGRHRSFLKSCGRVLIQ*PWASPT
Trigger: GGTGGGGGAGGCCCACGGCCACTGGATCAGAACCCT...CCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGTGGTGGGGACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGCCCGCCGAAGGCCTaGTTGAGCACCACGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GGGDRESSVYLTLPLILISPPKA*LSTTPQ
Trigger: CTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGGGCT...GATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTCCCCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAGGCTATGGCTTTaGCTGCACCTCGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VTLPGRVHVTPSSSPTPLQRLWL*LHLGEG
Trigger: GCCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTG...GAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAGGCAGAGGCTATaGCTTTGGCTGCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: VTLPGRVHVTPSSSPTPLQRQRL*LWLHLG
Trigger: CCCGAGGTGCAGCCAAAGCCATAGCCTCTGCCTCTG...GAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGCCAATGTCTTCAATCCCAGCGGCTAGGAACCCTTCACCTTGGTGAGCAACAACAGCTGCGGTGGTGGTaGCTGCCCGGGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GQCLQSQRLGTLHLGEQQQLRWW*LPGRLL
Trigger: CAGCAGCCTCCCGGGCAGCCACCACCACCGCAGCTG...TTGTTGCTCACCAAGGTGAAGGGTTCCTAGCCGCTGGGATTGAAGACATTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635285.1
CDS-3UTR CCA 90 bp CCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCGGAGGGTGGCGACTTaGGTCCTGCAGATGCCCAAC +
Preference number: 4 (lower is better)
Translates to: PTLPPKRLEGAEAAALKPRRVAT*VLQMPN
Trigger: GTTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCG...GGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACGGAGGGTGGCGACTTaGGTCCTGCAGATGCCCAAC +
Preference number: 4 (lower is better)
Translates to: KGVTLPGRVHVTPSSSPTRRVAT*VLQMPN
Trigger: GTTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCG...TGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACGGAGGGTGGCGACTTaGGTCCTGCAGATGCCCAAC +
Preference number: 4 (lower is better)
Translates to: PPTLPPKRLEGAEAAALKRRVAT*VLQMPN
Trigger: GTTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCG...TTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCGGAGGGTGGCGACTTaGGTCCTGCAGATGCCCAAC +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTRRVAT*VLQMPN
Trigger: GTTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCG...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp ACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTAGGTGGAGGGACTGCTaGGAGGGACTCTCCCAGACG +
Preference number: 4 (lower is better)
Translates to: TLPPKRLEGAEAAALKPPRWRDC*EGLSQT
Trigger: CGTCTGGGAGAGTCCCTCCCAGCAGTCCCTCCACCT...AGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACAAGGTGGAGGGACTGCTaGGAGGGACTCTCCCAGACG +
Preference number: 4 (lower is better)
Translates to: KGVTLPGRVHVTPSSSPTRWRDC*EGLSQT
Trigger: CGTCTGGGAGAGTCCCTCCCAGCAGTCCCTCCACCT...TGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTAAAGCTGGGCTAGGCTaGCAGGCGGGTTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: QGKGVTLPGRVHVTPSSSKAGLG*QAGFLS
Trigger: GCTCAGGAAACCCGCCTGCCAGCCTAGCCCAGCTTT...ACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR CCA 90 bp GGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGAGAAAAACACAAAGCTaGGCTAGGCTGGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GRDSPRRETSRRGHRVGERKTQS*ARLAGG
Trigger: CCCGCCTGCCAGCCTAGCCCAGCTTTGTGTTTTTCT...CTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR CCA 90 bp ATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAGAAGCAACTCCGCACTaGCGGTCCCCGGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: IPPTLPPKRLEGAEAAALEATPH*RSPAPM
Trigger: CATTGGAGCCGGGGACCGCCAGTGCGGAGTTGCTTC...TAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452555.7
CDS-3UTR CCA 90 bp AGGCTGCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTCAGCCTGTCTCACCCGCACTaGCGGTCCCCGGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: RLRFSMSTENSAVVRIFSLSHPH*RSPAPM
Trigger: CATTGGAGCCGGGGACCGCCAGTGCGGGTGAGACAG...GCTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR CCA 90 bp AACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCACGTTACCCGCACTaGCGGTCCCCGGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: NPASKEVRGSRGGSSKTPSRYPH*RSPAPM
Trigger: CATTGGAGCCGGGGACCGCCAGTGCGGGTAACGTGA...GGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635589.1
CDS-3UTR TCA 90 bp CTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTTCTGCAAGGTGTAGATaGGAGAGGGCACTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: LQGKGVTLPGRVHVTPSSSARCR*ERALRA
Trigger: AGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGA...AGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACAGGCTGCGATTCAGCATaGGCACGGAGAACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: KGVTLPGRVHVTPSSSPTGCDSA*ARRTAL
Trigger: CAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCC...TGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp ATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAGGCTGCGATTCAGCATaGGCACGGAGAACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: IPPTLPPKRLEGAEAAALGCDSA*ARRTAL
Trigger: CAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCC...TAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AAGGGAGGAGAGAAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCCTGCCCCAGGGTTCTaGTCCAGTGGCCGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: KGGEKASNYGQLNPTGRHPAPGF*SSGRGP
Trigger: AGGCCCACGGCCACTGGATCAGAACCCTGGGGCAGG...ATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTCTCTCCTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTCGCCGAAGGCCTGGTTaGGCACCACGCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: GRHRSFLKSCGSFVQCVLRRRPG*APRPRQ
Trigger: CTGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCG...AAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACAGGTAGACAGCACCAATaGCGAGTCCAGCGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: KGVTLPGRVHVTPSSSPTGRQHQ*RVQRQG
Trigger: CCCTTGGCGCTGGACTCGTCATTGGTGCTGTCTACC...TGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp TTTGGCAGAAAGGGCTCCGTGATGAGGTCTCCACGGTGGGAAGACAGCTGCGGTGGTAGACAGCACCAATaGCGAGTCCAGCGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: FGRKGSVMRSPRWEDSCGGRQHQ*RVQRQG
Trigger: CCCTTGGCGCTGGACTCGTCATTGGTGCTGTCTACC...ACCGCAGCTGTCTTCCCACCGTGGAGACCTCATCACGGAGCCCTTTCTGCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413561.7
ENST00000635628.1
CDS-3UTR TCA 90 bp CCTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTCACTTCACCAGCACTaGCTTTGGCAGAAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: PPGEGGHPTRKGSRDTQLSLHQH*LWQKGL
Trigger: GAGCCCTTTCTGCCAAAGTCAGTGCTGGTGAAGTGA...GAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGGAGGCATCGGTCATTCCTaGAGAGCTGCGGGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: RDSPRRETSRRGHRVGEGGIGHS*RAAGVL
Trigger: CAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCC...TCCCTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AAGGGAGGAGAGAAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGCTGCCGGGCCACCTaGGTGAAGGTGGAGCGAGAG +
Preference number: 4 (lower is better)
Translates to: KGGEKASNYGQLNPTGRHRCRAT*VKVERE
Trigger: CTCTCGCTCCACCTTCACTCAGGTGGCCCGGCAGCG...ATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTCTCTCCTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376521.6
CDS-3UTR TCA 90 bp AACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCCGGCTTCCTCCCAAGTaGGAAGCAACTCCGCACTGG +
Preference number: 4 (lower is better)
Translates to: NPASKEVRGSRGGSSKTPRLPPK*EATPHW
Trigger: CCAGTGCGGAGTTGCTTCTCACTTGGGAGGAAGCCG...GGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452555.7
CDS-3UTR TCA 90 bp AACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCGTGTCAGGTAATGGCTaGGGCAAACCCTGGCCACGC +
Preference number: 4 (lower is better)
Translates to: NPASKEVRGSRGGSSKTPVSGNG*GKPWPR
Trigger: GCGTGGCCAGGGTTTGCCTCAGCCATTACCTGACAC...GGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452555.7
CDS-3UTR GCA 90 bp CTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGCGTGTCCACATACTaGACCAGGACAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: LQGKGVTLPGRVHVTPSSSVSTY*TRTASW
Trigger: CCATGAGGCTGTCCTGGTGCAGTATGTGGACACGCT...AGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGDERGH*ELERVH
Trigger: GTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATC...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ASKEVRGSRGGSSKTPSRDERGH*ELERVH
Trigger: GTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATC...CCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: VTLPGRVHVTPSSSPTPLDERGH*ELERVH
Trigger: GTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATC...GAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp AAGGCTGCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTCAGAGCAGGGAGGCCCACTaGAGCCGGGAAAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: KAAIQHEHGEQRCGQDLQSREAH*SRERLR
Trigger: TCGCAGCCTTTCCCGGCTGCAGTGGGCCTCCCTGCT...CTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR GCA 90 bp AACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGCCCACCGGCTTGCTGTaGCTGGACAATGGCGACGCC +
Preference number: 4 (lower is better)
Translates to: NPTGRHRSFLKSCGSFVQPTGLL*LDNGDA
Trigger: GGCGTCGCCATTGTCCAGGCACAGCAAGCCGGTGGG...CTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GGTGAGGCTGGTAGTCCTGGGGTTAGTAATGGTGCCCACCTGGTCAGAAAGCTACCCACCGGCTTGCTGTaGCTGGACAATGGCGACGCC +
Preference number: 4 (lower is better)
Translates to: GEAGSPGVSNGAHLVRKLPTGLL*LDNGDA
Trigger: GGCGTCGCCATTGTCCAGGCACAGCAAGCCGGTGGG...TAGCTTTCTGACCAGGTGGGCACCATTACTAACCCCAGGACTACCAGCCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR GCA 90 bp CCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCACCTCCCCCACCGGCTTaGTGTGCCTGGACAATGGCG +
Preference number: 4 (lower is better)
Translates to: PHSTPNTDQSLVPAGPRAPPPPA*CAWTMA
Trigger: CGCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGG...TGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GGTGGTGGGGACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCCCTCCCCCACCGGCTTaGTGTGCCTGGACAATGGCG +
Preference number: 4 (lower is better)
Translates to: GGGDRESSVYLTLPLILIPPPPA*CAWTMA
Trigger: CGCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGG...GATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTCCCCACCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp ATTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTCAGCTGGTATGTGGAGGCCACGACGGCTaGCAGGCCTGCCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: IQHEHGEQRCGQDLQLVCGGHDG*QACPRV
Trigger: AACCCTGGGGCAGGCCTGGCAGCCGTCGTGGCCTCC...ACATACCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR GCA 90 bp AAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGGGCCCAGTTGCAGGTTaGGCAGCCACACGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: KSCGSFVQCVLMEVEGLLGPVAG*AATRSL
Trigger: CAGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCC...CAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCGGCTATGGCTTTGGCTaGACCTCGGGGAAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: VTLPGRVHVTPSSSPTPLGYGFG*TSGKAV
Trigger: TACAGCCTTCCCCGAGGTGCAGCCAAAGCCATAGCC...GAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGGGAGTGGCGACTTGGGTCCTaGAGATGCCCAACACCCTCC +
Preference number: 4 (lower is better)
Translates to: AAGVLSSVSLWRWRDCWEWRLGS*RCPTPS
Trigger: GGAGGGTGTTGGGCATCTGCAGGACCCAAGTCGCCA...CTCCCAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCATCAATCCCAAGACACCCCCTGGCGACTTGGGTCCTaGAGATGCCCAACACCCTCC +
Preference number: 4 (lower is better)
Translates to: LWGAQEAGSTVHQSQDTPWRLGS*RCPTPS
Trigger: GGAGGGTGTTGGGCATCTGCAGGACCCAAGTCGCCA...GGGGGTGTCTTGGGATTGATGAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR GCA 90 bp AAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACATGGCGACTTGGGTCCTaGAGATGCCCAACACCCTCC +
Preference number: 4 (lower is better)
Translates to: KGVTLPGRVHVTPSSSPTWRLGS*RCPTPS
Trigger: GGAGGGTGTTGGGCATCTGCAGGACCCAAGTCGCCA...TGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCTGGGGACTCACAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGGACCTCCGCCTCCCATaGGACTGCTCGGGCAGACTG +
Preference number: 4 (lower is better)
Translates to: PGDSQEAHLQGIKEAGPRDLRLP*DCSGRL
Trigger: CAGTCTGCCCGAGCAGTCGCATGGGAGGCGGAGGTC...CCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTGTGAGTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR CCA 90 bp TATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGCCGGCTTGCTGTGCCTaGACAATGGCGACGCCAGTG +
Preference number: 4 (lower is better)
Translates to: YGQLNPTGRHRSFLKSCGPACCA*TMATPV
Trigger: CACTGGCGTCGCCATTGTCCAGGCACAGCAAGCCGG...CCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCAAAAGAAACCACGGGTaGCCACGGCGGTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: VTLPGRVHVTPSSSPTPLKRNHG*PRRYPQ
Trigger: CTGAGGGTACCGCCGTGGCCACCCGTGGTTTCTTTT...GAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCAGAGGCTATGGCTTTaGCTGCACCTCGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PTLPPKRLEGAEAAALKPQRLWL*LHLGEG
Trigger: GCCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTG...GGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp ATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTACAGAGGCTATGGCTTTaGCTGCACCTCGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: IPPTLPPKRLEGAEAAALQRLWL*LHLGEG
Trigger: GCCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTG...TAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGCAGAGGCAGAGGCTATaGCTTTGGCTGCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: GPRARRENEARPMSSIPAQRQRL*LWLHLG
Trigger: CCCGAGGTGCAGCCAAAGCCATAGCCTCTGCCTCTG...CGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCAGAGGCAGAGGCTATaGCTTTGGCTGCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTQRQRL*LWLHLG
Trigger: CCCGAGGTGCAGCCAAAGCCATAGCCTCTGCCTCTG...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACAGAGGCAGAGGCTATaGCTTTGGCTGCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: KGVTLPGRVHVTPSSSPTQRQRL*LWLHLG
Trigger: CCCGAGGTGCAGCCAAAGCCATAGCCTCTGCCTCTG...TGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCACAGCTGCGGTGGTGGTaGCTGCCCGGGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CLPHSTPNTDQSLVPAGPQLRWW*LPGRLL
Trigger: CAGCAGCCTCCCGGGCAGCCACCACCACCGCAGCTG...TGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGCTGGCCCAAGGCCACACAAAAGACGGAACTAGTAACATGATCCAGAGCGGTCAGCTGCGGTGGTGGTaGCTGCCCGGGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KLAQGHTKDGTSNMIQSGQLRWW*LPGRLL
Trigger: CAGCAGCCTCCCGGGCAGCCACCACCACCGCAGCTG...ACCGCTCTGGATCATGTTACTAGTTCCGTCTTTTGTGTGGCCTTGGGCCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TGGTGGGGACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGGGAAGACAGCTGCGGTaGTGGTGGCTGCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: WWGQGVQCLPHSTPNTDQGRQLR*WWLPGR
Trigger: CCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCC...CTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTCCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGATGAGGTCTCCACGGTaGGAAGACAGCTGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: ASKEVRGSRGGSSKTPSRMRSPR*EDSCGG
Trigger: ACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCAT...CCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTATGAGGTCTCCACGGTaGGAAGACAGCTGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: QGKGVTLPGRVHVTPSSSMRSPR*EDSCGG
Trigger: ACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCAT...ACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGCATGTTGGCCCTGGGTaGGGCAGGGGTGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: ASNYGQLNPTGRHRSFLKHVGPG*GRGGGD
Trigger: GTCCCCACCACCCCTGCCCCACCCAGGGCCAACATG...CTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGGTTAATAAGCTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCATCAATCCCCATGTTGGCCCTGGGTaGGGCAGGGGTGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GLISFGERRRQVPQFINPHVGPG*GRGGGD
Trigger: GTCCCCACCACCCCTGCCCCACCCAGGGCCAACATG...GGGATTGATGAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAGCTTATTAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR CCA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCACCTCGGGGAAGGCTaGAAAGTGGCAGCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAAHLGEG*KVAAGR
Trigger: CCTACCAGCTGCCACTTTCCAGCCTTCCCCGAGGTG...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376515.8
ENST00000445167.7
CDS-3UTR CCA 90 bp CCTGGGGACTCACAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCAACCGCTGCCATGTTaGCATCTGCCCGGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: PGDSQEAHLQGIKEAGPRQPLPC*HLPGPS
Trigger: GGACGGGCCGGGCAGATGCCAACATGGCAGCGGTTG...CCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTGTGAGTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000445167.7
CDS-3UTR CCA 90 bp ATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGCCAGGCCCCGGAGGGTaGCGACTTGGGTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: IPEELREFCPVCPYGGGGPGPGG*RLGSCR
Trigger: TCTGCAGGACCCAAGTCGCCACCCTCCGGGGCCTGG...CCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATAGGTGGAGGGACTGCTaGGAGGGACTCTCCCAGACG +
Preference number: 4 (lower is better)
Translates to: PSWAKGKKRERGQANVFNRWRDC*EGLSQT
Trigger: CGTCTGGGAGAGTCCCTCCCAGCAGTCCCTCCACCT...ATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCGGGATCGTCAGGGTaGTGGCTTTTCTCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTPGSSG*WLFSSA
Trigger: AGCGGAGGAGAAAAGCCACCACCCTGACGATCCCGG...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376521.6
CDS-3UTR CCA 90 bp CTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCATCAATCCCAAGACACCCCCAAAGCTGGGCTAGGCTaGCAGGCGGGTTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LWGAQEAGSTVHQSQDTPKAGLG*QAGFLS
Trigger: GCTCAGGAAACCCGCCTGCCAGCCTAGCCCAGCTTT...GGGGGTGTCTTGGGATTGATGAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR TCA 90 bp GGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGAGGGCACTGCGAGCTTaGGCGTGTCCACATACTGCA +
Preference number: 4 (lower is better)
Translates to: GPRARRENEARPMSSIPARALRA*ACPHTA
Trigger: TGCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCT...CGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTAGGGCACTGCGAGCTTaGGCGTGTCCACATACTGCA +
Preference number: 4 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAARALRA*ACPHTA
Trigger: TGCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCT...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AAGCTGGCCCAAGGCCACACAAAAGACGGAACTAGTAACATGATCCAGAGCGGTCCTGCCCCAGGGTTCTaGTCCAGTGGCCGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: KLAQGHTKDGTSNMIQSGPAPGF*SSGRGP
Trigger: AGGCCCACGGCCACTGGATCAGAACCCTGGGGCAGG...ACCGCTCTGGATCATGTTACTAGTTCCGTCTTTTGTGTGGCCTTGGGCCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCAGCCACACGGAGCCTaGGCTGCCTTTGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTQPHGA*AAFEDL
Trigger: AAGATCCTCAAAGGCAGCTCAGGCTCCGTGTGGCTG...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp TCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCCGCCGAAGGCCTGGTTaGGCACCACGCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: SNYGQLNPTGRHRSFLKSRRRPG*APRPRQ
Trigger: CTGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCG...GCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGAGGTGGCAAAGCCCTTaGGGATATTGTCAGCGTACT +
Preference number: 4 (lower is better)
Translates to: GRDSPRRETSRRGHRVGERWQSP*GYCQRT
Trigger: AGTACGCTGACAATATCCTCAAGGGCTTTGCCACCT...CTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CCTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCAGGTGGCAAAGCCCTTaGGGATATTGTCAGCGTACT +
Preference number: 4 (lower is better)
Translates to: PPGEGGHPTRKGSRDTQLRWQSP*GYCQRT
Trigger: AGTACGCTGACAATATCCTCAAGGGCTTTGCCACCT...GAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTTCACTTCACCAGCACTaGCTTTGGCAGAAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LQGKGVTLPGRVHVTPSSSLHQH*LWQKGL
Trigger: GAGCCCTTTCTGCCAAAGTCAGTGCTGGTGAAGTGA...AGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGCTCCAGAAGTCTCAGTaGCCTGGGAGAAAAGACCAT +
Preference number: 4 (lower is better)
Translates to: GRDSPRRETSRRGHRVGELQKSQ*PGRKDH
Trigger: ATGGTCTTTTCTCCCAGGTCACTGAGACTTCTGGAG...CTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCCAGGAAGGGTTCACGTaGCACCCAGCTCTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: NPASKEVRGSRGGSSKTPQEGFT*HPALVP
Trigger: TGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTG...GGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGGGAGCAGGAAGGGTTCACGTaGCACCCAGCTCTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: AAGVLSSVSLWRWRDCWEQEGFT*HPALVP
Trigger: TGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTG...CTCCCAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGCAGGAAGGGTTCACGTaGCACCCAGCTCTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKQEGFT*HPALVP
Trigger: TGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTG...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCAGGAAGGGTTCACGTaGCACCCAGCTCTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTQEGFT*HPALVP
Trigger: TGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTG...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAACCCTTCACCTTGGTaGGCAACCTGTGGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: LQGKGVTLPGRVHVTPSSNPSPW*ATCGGN
Trigger: ATTCCCACCACAGGTTGCTCACCAAGGTGAAGGGTT...AGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR GCA 90 bp TTGAACCCAGACAGCCTGGCCCCAGAATCCAGGCTCTTTAACCATTTCACAAAGGGTCCCCGGCTCCAATaGACCCGCGGAAACCGCCCC +
Preference number: 4 (lower is better)
Translates to: LNPDSLAPESRLFNHFTKGPRLQ*TRGNRP
Trigger: GGGGCGGTTTCCGCGGGTGCATTGGAGCCGGGGACC...CTTTGTGAAATGGTTAAAGAGCCTGGATTCTGGGGCCAGGCTGTCTGGGTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR GCA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGGTTACCCCTCTTCTGTaGGAAGAGCAGCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGVTPLL*EEQQQA
Trigger: TGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGTAAC...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCAGGAAGAGAACCAGGTaGTTCACGTTACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PPGEGGHPTRKGSRDTQLRKRTR*FTLPLF
Trigger: GAAGAGGGGTAACGTGAAGCACCTGGTTCTCTTCCT...GAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGAGCGTGTCCACATACTaGACCAGGACAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: ASKEVRGSRGGSSKTPSRSVSTY*TRTASW
Trigger: CCATGAGGCTGTCCTGGTGCAGTATGTGGACACGCT...CCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTDERGH*ELERVH
Trigger: GTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATC...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp AAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACAGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: KGVTLPGRVHVTPSSSPTDERGH*ELERVH
Trigger: GTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATC...TGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GGGTTAATAAGCTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCATCAATCCCCCTCCCCCACCGGCTTaGTGTGCCTGGACAATGGCG +
Preference number: 4 (lower is better)
Translates to: GLISFGERRRQVPQFINPPPPPA*CAWTMA
Trigger: CGCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGG...GGGATTGATGAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAGCTTATTAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR GCA 90 bp CAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGAGGAGGCCACGACGGCTaGCAGGCCTGCCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: QEAHLQGIKEAGPRPHKRGGHDG*QACPRV
Trigger: AACCCTGGGGCAGGCCTGGCAGCCGTCGTGGCCTCC...TCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCACCAGGCCCAGTGCTGTaGCGAAGAGGCCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: PHSTPNTDQSLVPAGPRAPGPVL*RRGPVA
Trigger: TGCAACTGGGCCTCTTCGGCACAGCACTGGGCCTGG...TGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAAGGCTATGGCTTTGGCTaGACCTCGGGGAAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PPTLPPKRLEGAEAAALKGYGFG*TSGKAV
Trigger: TACAGCCTTCCCCGAGGTGCAGCCAAAGCCATAGCC...TTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp AACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCGGCTATGGCTTTGGCTaGACCTCGGGGAAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: NPASKEVRGSRGGSSKTPGYGFG*TSGKAV
Trigger: TACAGCCTTCCCCGAGGTGCAGCCAAAGCCATAGCC...GGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp AGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACGTGCCATGTTGGCATCTaGCCGGCCCGTCCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RSPSSRYQGSWPKATQKTCHVGI*PARPLG
Trigger: GCCGAGGGGACGGGCCGGGCAGATGCCAACATGGCA...CGTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000445167.7
CDS-3UTR GCA 90 bp CTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGGGAGGAGACCCGCCTTATCCTaGCGTTCGTCCGCTTCACTG +
Preference number: 4 (lower is better)
Translates to: LREFCPVCPYGGGGTAGRRPALS*RSSASL
Trigger: CAGTGAAGCGGACGAACGGCAGGATAAGGCGGGTCT...CCTCCCAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376515.8
ENST00000376521.6
CDS-3UTR GCA 90 bp CCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGGCTTGGCGACTTGGGTCCTaGAGATGCCCAACACCCTCC +
Preference number: 4 (lower is better)
Translates to: PRARRENEARPMSSIPAAWRLGS*RCPTPS
Trigger: GGAGGGTGTTGGGCATCTGCAGGACCCAAGTCGCCA...AGCCGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CTGCAGCCGGGAAAGGCTGCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTAGCGTGTCCACATACTaGACCAGGACAGCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: LQPGKAAIQHEHGEQRCGSVSTY*TRTAPL
Trigger: AAGAGGGGCTGTCCTGGTGCAGTATGTGGACACGCT...ACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCTTTCCCGGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634665.1
CDS-3UTR GCA 90 bp AGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGGAAGGAAGAGAACCAGGTaGTTCACGTTACCCGCACTG +
Preference number: 4 (lower is better)
Translates to: RDSPRRETSRRGHRVGEGRKRTR*FTLPAL
Trigger: CAGTGCGGGTAACGTGAAGCACCTGGTTCTCTTCCT...TCCCTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635589.1
CDS-3UTR CCA 90 bp AGGTTGAAGGAGTTCCAAGGACATTCTGAAGGTGACATAGCCCCTGTCCTCTGCGCCTGTGAGCCGCACTaGCGGTCCCCGGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: RLKEFQGHSEGDIAPVLCACEPH*RSPAPM
Trigger: CATTGGAGCCGGGGACCGCCAGTGCGGCTCACAGGC...GCAGAGGACAGGGGCTATGTCACCTTCAGAATGTCCTTGGAACTCCTTCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376512.2
CDS-3UTR CCA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGATGAGGGAGGCATTCTaGACCACCAGCACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGMREAF*TTSTAR
Trigger: CCTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCAT...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTATGAGGGAGGCATTCTaGACCACCAGCACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: QGKGVTLPGRVHVTPSSSMREAF*TTSTAR
Trigger: CCTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCAT...ACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGGCTGCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTCAGAAAGAAGCGGTCCCCTaGCAACGTGCGGGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: KAAIQHEHGEQRCGQDLQKEAVP*QRAGVA
Trigger: CGCTACGCCCGCACGTTGCCAGGGGACCGCTTCTTT...CTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634665.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GAGGCAACAGTGGACAGCACAATGGACAGGGAGGTGGCAAAGCCCTTGAGGATAAAAGAAGCGGTCCCCTaGCAACGTGCGGGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: EATVDSTMDREVAKPLRIKEAVP*QRAGVA
Trigger: CGCTACGCCCGCACGTTGCCAGGGGACCGCTTCTTT...TATCCTCAAGGGCTTTGCCACCTCCCTGTCCATTGTGCTGTCCACTGTTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR CCA 90 bp AGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACGCTGATCCAGTGGCCGTaGGCCTCCCCCACCGGCTTG +
Preference number: 4 (lower is better)
Translates to: RSPSSRYQGSWPKATQKTLIQWP*ASPTGL
Trigger: CAAGCCGGTGGGGGAGGCCCACGGCCACTGGATCAG...CGTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGAAAAGAAACCACGGGTaGCCACGGCGGTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKKRNHG*PRRYPQ
Trigger: CTGAGGGTACCGCCGTGGCCACCCGTGGTTTCTTTT...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTAAAAGAAACCACGGGTaGCCACGGCGGTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAAKRNHG*PRRYPQ
Trigger: CTGAGGGTACCGCCGTGGCCACCCGTGGTTTCTTTT...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCAAGAAGAAGCCCGCCGAAGGCCTaGTTGAGCACCACGCCCCAG +
Preference number: 4 (lower is better)
Translates to: STPNTDQSLVPAGPRARRSPPKA*LSTTPQ
Trigger: CTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGGGCT...TCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGCTGGCCCAAGGCCACACAAAAGACGGAACTAGTAACATGATCCAGAGCGGTAGCCCGCCGAAGGCCTaGTTGAGCACCACGCCCCAG +
Preference number: 4 (lower is better)
Translates to: KLAQGHTKDGTSNMIQSGSPPKA*LSTTPQ
Trigger: CTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGGGCT...ACCGCTCTGGATCATGTTACTAGTTCCGTCTTTTGTGTGGCCTTGGGCCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGCCCGCCGAAGGCCTaGTTGAGCACCACGCCCCAG +
Preference number: 4 (lower is better)
Translates to: CLPHSTPNTDQSLVPAGPSPPKA*LSTTPQ
Trigger: CTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGGGCT...TGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGCAGTGGACAGCACAATaGACAGGGAGGTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGQWTAQ*TGRWQS
Trigger: GCTTTGCCACCTCCCTGTCCATTGTGCTGTCCACTG...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGTGGACAGCACAATaGACAGGGAGGTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: VTLPGRVHVTPSSSPTPLQWTAQ*TGRWQS
Trigger: GCTTTGCCACCTCCCTGTCCATTGTGCTGTCCACTG...GAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTGCAGCCGGGAAAGGCTGCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGTGGACAGCACAATaGACAGGGAGGTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: LQPGKAAIQHEHGEQRCGQWTAQ*TGRWQS
Trigger: GCTTTGCCACCTCCCTGTCCATTGTGCTGTCCACTG...ACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCTTTCCCGGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR CCA 90 bp AGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGGAAGCCAAAGAGGCGAATaGAGGCAACAGTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: RDSPRRETSRRGHRVGEGSQRGE*RQQWTA
Trigger: TGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCT...TCCCTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CACTTCACCAGCACTGACTTTGGCAGAAAGGGCTCCGTGATGAGGTCTCCACGGCAGAGGCTATGGCTTTaGCTGCACCTCGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HFTSTDFGRKGSVMRSPRQRLWL*LHLGEG
Trigger: GCCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTG...CCGTGGAGACCTCATCACGGAGCCCTTTCTGCCAAAGTCAGTGCTGGTGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413561.7
ENST00000635628.1
CDS-3UTR CCA 90 bp CCCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCAGAGGCAGAGGCTATaGCTTTGGCTGCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: PSWAKGKKRERGQANVFNQRQRL*LWLHLG
Trigger: CCCGAGGTGCAGCCAAAGCCATAGCCTCTGCCTCTG...ATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGCAGAGGCAGAGGCTATaGCTTTGGCTGCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: YGQLNPTGRHRSFLKSCGQRQRL*LWLHLG
Trigger: CCCGAGGTGCAGCCAAAGCCATAGCCTCTGCCTCTG...CCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCATCAATCCCAAGACACCCCCATCAGAGGCAGAGGCTATaGCTTTGGCTGCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: LGSAGGRFHSSSIPRHPHQRQRL*LWLHLG
Trigger: CCCGAGGTGCAGCCAAAGCCATAGCCTCTGCCTCTG...ATGGGGGTGTCTTGGGATTGATGAACTGTGGAACCTGCCTCCTGCGCTCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR CCA 90 bp AGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACGGGAAGACAGCTGCGGTaGTGGTGGCTGCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: RSPSSRYQGSWPKATQKTGRQLR*WWLPGR
Trigger: CCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCC...CGTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAAGACGGAACTAGTAACATGATCCAGAGCGGTGGTAAGGGAGGAGAGAAGGCCGGAAGACAGCTGCGGTaGTGGTGGCTGCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: KDGTSNMIQSGGKGGEKAGRQLR*WWLPGR
Trigger: CCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCC...GGCCTTCTCTCCTCCCTTACCACCGCTCTGGATCATGTTACTAGTTCCGTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGGGAGATGAGGTCTCCACGGTaGGAAGACAGCTGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: AAGVLSSVSLWRWRDCWEMRSPR*EDSCGG
Trigger: ACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCAT...CTCCCAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGTCCAGTGTGTCCTTATaGAGGTGGAGGGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASKEVRGSRGGSSKTPSRSSVSL*RWRDCW
Trigger: CCAGCAGTCCCTCCACCTCCATAAGGACACACTGGA...CCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGAGGTATCAAGGAAGCTaGCCCAAGGCCACACAAAAG +
Preference number: 4 (lower is better)
Translates to: GRDSPRRETSRRGHRVGERYQGS*PKATQK
Trigger: CTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCT...CTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCTCTGCAAGGTGTAGATaGGAGAGGGCACTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTSARCR*ERALRA
Trigger: AGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGA...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp ACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTTCTGCAAGGTGTAGATaGGAGAGGGCACTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: TLPPKRLEGAEAAALKPPSARCR*ERALRA
Trigger: AGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGA...AGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGTCTGCAAGGTGTAGATaGGAGAGGGCACTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKSARCR*ERALRA
Trigger: AGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGA...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAATCTGCAAGGTGTAGATaGGAGAGGGCACTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: PPTLPPKRLEGAEAAALKSARCR*ERALRA
Trigger: AGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGA...TTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGTCTGCAAGGTGTAGATaGGAGAGGGCACTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: GPRARRENEARPMSSIPASARCR*ERALRA
Trigger: AGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGA...CGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCAGGCTGCGATTCAGCATaGGCACGGAGAACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: PHSTPNTDQSLVPAGPRAGCDSA*ARRTAL
Trigger: CAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCC...TGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AGGCTGCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTCAGCCAGCCACACGGAGCCTaGGCTGCCTTTGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: RLRFSMSTENSAVVRIFSQPHGA*AAFEDL
Trigger: AAGATCCTCAAAGGCAGCTCAGGCTCCGTGTGGCTG...GCTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR TCA 90 bp CCTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTATTGTCAGCGTACTTaGCAACCACAGCCACCAGTA +
Preference number: 4 (lower is better)
Translates to: PPGEGGHPTRKGSRDTQLYCQRT*QPQPPV
Trigger: TACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATA...GAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGGTGGCAAAGCCCTTaGGGATATTGTCAGCGTACT +
Preference number: 4 (lower is better)
Translates to: LQGKGVTLPGRVHVTPSSRWQSP*GYCQRT
Trigger: AGTACGCTGACAATATCCTCAAGGGCTTTGCCACCT...AGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTTCACTTCACCAGCACTaGCTTTGGCAGAAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: QGKGVTLPGRVHVTPSSSSLHQH*LWQKGL
Trigger: GAGCCCTTTCTGCCAAAGTCAGTGCTGGTGAAGTGA...ACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGGACTCCAGAAGTCTCAGTaGCCTGGGAGAAAAGACCAT +
Preference number: 4 (lower is better)
Translates to: RDSPRRETSRRGHRVGEGLQKSQ*PGRKDH
Trigger: ATGGTCTTTTCTCCCAGGTCACTGAGACTTCTGGAG...TCCCTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCAGGAAGGGTTCACGTaGCACCCAGCTCTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LGQGQEERTRPGQCLQSQQEGFT*HPALVP
Trigger: TGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTG...CTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAAGTTACCCCTCTTCTGTaGGAAGAGCAGCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PPTLPPKRLEGAEAAALKVTPLL*EEQQQA
Trigger: TGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGTAAC...TTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGGGAGGGTTACCCCTCTTCTGTaGGAAGAGCAGCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LREFCPVCPYGGGGTAGRVTPLL*EEQQQA
Trigger: TGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGTAAC...CCTCCCAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp ATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAGTTACCCCTCTTCTGTaGGAAGAGCAGCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: IPPTLPPKRLEGAEAAALVTPLL*EEQQQA
Trigger: TGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGTAAC...TAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCAGCGTGTCCACATACTaGACCAGGACAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: PTLPPKRLEGAEAAALKPSVSTY*TRTASW
Trigger: CCATGAGGCTGTCCTGGTGCAGTATGTGGACACGCT...GGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp ATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAGCGTGTCCACATACTaGACCAGGACAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: IPPTLPPKRLEGAEAAALSVSTY*TRTASW
Trigger: CCATGAGGCTGTCCTGGTGCAGTATGTGGACACGCT...TAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGAGCGTGTCCACATACTaGACCAGGACAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKSVSTY*TRTASW
Trigger: CCATGAGGCTGTCCTGGTGCAGTATGTGGACACGCT...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCTCAAAGTAGACACCTaGGAAGCCGGAGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: QGKGVTLPGRVHVTPSSSLKVDT*EAGGET
Trigger: TGTCTCTCCTCCGGCTTCGCAGGTGTCTACTTTGAG...ACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGCTCAAAGTAGACACCTaGGAAGCCGGAGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: ASKEVRGSRGGSSKTPSRLKVDT*EAGGET
Trigger: TGTCTCTCCTCCGGCTTCGCAGGTGTCTACTTTGAG...CCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp TCCCTGGGGACTCACAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAACCGAAGAGGCCCAGTTaGAGGTTGCGCAGCCACACG +
Preference number: 4 (lower is better)
Translates to: SLGTHKKPIFKVSRKLAQPKRPS*RLRSHT
Trigger: CGTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGG...TTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTGTGAGTCCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635628.1
CDS-3UTR GCA 90 bp GGGTTAATAAGCTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCATCAATCCCCCAGGCCCAGTGCTGTaGCGAAGAGGCCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: GLISFGERRRQVPQFINPPGPVL*RRGPVA
Trigger: TGCAACTGGGCCTCTTCGGCACAGCACTGGGCCTGG...GGGATTGATGAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAGCTTATTAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635628.1
CDS-3UTR GCA 90 bp AAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGTGGCGACTTGGGTCCTaGAGATGCCCAACACCCTCC +
Preference number: 4 (lower is better)
Translates to: KSCGSFVQCVLMEVEGLLWRLGS*RCPTPS
Trigger: GGAGGGTGTTGGGCATCTGCAGGACCCAAGTCGCCA...CAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCATCAATCCCAAGACACCCCCATGAGGGAGGCATTCTaGACCACCAGCACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: LWGAQEAGSTVHQSQDTPMREAF*TTSTAR
Trigger: CCTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCAT...GGGGGTGTCTTGGGATTGATGAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000445167.7
ENST00000635628.1
CDS-3UTR CCA 90 bp CCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCATGAGGGAGGCATTCTaGACCACCAGCACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: PTLPPKRLEGAEAAALKPMREAF*TTSTAR
Trigger: CCTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCAT...GGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CGGGAAAGGCTGCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCATGAGGGAGGCATTCTaGACCACCAGCACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: RERLRFSMSTENSAVVRIMREAF*TTSTAR
Trigger: CCTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCAT...GATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCTTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634665.1
ENST00000635628.1
CDS-3UTR CCA 90 bp ACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCAAAGAAGCGGTCCCCTaGCAACGTGCGGGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: TGRHRSFLKSCGSFVQCVKEAVP*QRAGVA
Trigger: CGCTACGCCCGCACGTTGCCAGGGGACCGCTTCTTT...GACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCGTCAGGATCTTCAGCTaGTATGTCACCTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PPGEGGHPTRKGSRDTQLVRIFS*YVTWKV
Trigger: CACTTTCCAGGTGACATACCAGCTGAAGATCCTGAC...GAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCGGAGAACAGCGCTGTaGTCAGGATCTTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTRRTAL*SGSSAG
Trigger: ACCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCG...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCCGGAGAACAGCGCTGTaGTCAGGATCTTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: NPASKEVRGSRGGSSKTPRRTAL*SGSSAG
Trigger: ACCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCG...GGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGCTGATCCAGTGGCCGTaGGCCTCCCCCACCGGCTTG +
Preference number: 4 (lower is better)
Translates to: DRESSVYLTLPLILIRVWLIQWP*ASPTGL
Trigger: CAAGCCGGTGGGGGAGGCCCACGGCCACTGGATCAG...CCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCAAGAAGAAGGGTTCTGATCCAGTaGCCGTGGGCCTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: STPNTDQSLVPAGPRARRRVLIQ*PWASPT
Trigger: GGTGGGGGAGGCCCACGGCCACTGGATCAGAACCCT...TCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCAAAAGAAACCACGGGTaGCCACGGCGGTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: PAGPRARRENEARPMSSIKRNHG*PRRYPQ
Trigger: CTGAGGGTACCGCCGTGGCCACCCGTGGTTTCTTTT...GATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGCAGTGGACAGCACAATaGACAGGGAGGTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: GPRARRENEARPMSSIPAQWTAQ*TGRWQS
Trigger: GCTTTGCCACCTCCCTGTCCATTGTGCTGTCCACTG...CGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCAGTGGACAGCACAATaGACAGGGAGGTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTQWTAQ*TGRWQS
Trigger: GCTTTGCCACCTCCCTGTCCATTGTGCTGTCCACTG...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCCAGTGGACAGCACAATaGACAGGGAGGTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: NPASKEVRGSRGGSSKTPQWTAQ*TGRWQS
Trigger: GCTTTGCCACCTCCCTGTCCATTGTGCTGTCCACTG...GGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCGAATGGAGGCAACAGTaGACAGCACAATGGACAGGG +
Preference number: 4 (lower is better)
Translates to: VTLPGRVHVTPSSSPTPLEWRQQ*TAQWTG
Trigger: CCCTGTCCATTGTGCTGTCCACTGTTGCCTCCATTC...GAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCACAGAGGCTATGGCTTTaGCTGCACCTCGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PHSTPNTDQSLVPAGPRAQRLWL*LHLGEG
Trigger: GCCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTG...TGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGGCTGCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTCAGCAGAGGCTATGGCTTTaGCTGCACCTCGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KAAIQHEHGEQRCGQDLQQRLWL*LHLGEG
Trigger: GCCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTG...CTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR CCA 90 bp AACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGCAGAGGCAGAGGCTATaGCTTTGGCTGCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: NPTGRHRSFLKSCGSFVQQRQRL*LWLHLG
Trigger: CCCGAGGTGCAGCCAAAGCCATAGCCTCTGCCTCTG...CTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGAGACAGCTGCGGTGGTaGTGGCTGCCCGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ESSVYLTLPLILIRVWSQRQLRW*WLPGRL
Trigger: CAGCCTCCCGGGCAGCCACCACCACCGCAGCTGTCT...CTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGAAGACAGCTGCGGTGGTaGTGGCTGCCCGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QEAHLQGIKEAGPRPHKRRQLRW*WLPGRL
Trigger: CAGCCTCCCGGGCAGCCACCACCACCGCAGCTGTCT...TCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGAGGAAGACAGCTGCGGTaGTGGTGGCTGCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: QEAHLQGIKEAGPRPHKRGRQLR*WWLPGR
Trigger: CCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCC...TCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGGGAGGAGTTTGGTCCCAGCTaGGCCAAGGGCAAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: AAGVLSSVSLWRWRDCWEEFGPS*AKGKKR
Trigger: TCTCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTC...CTCCCAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTGCAGCCGGGAAAGGCTGCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTATACTGATCAGAGTTTaGTCCCAGCTGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LQPGKAAIQHEHGEQRCGILIRV*SQLGQG
Trigger: CCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTAT...ACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCTTTCCCGGCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR CCA 90 bp GTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTCATGTTGGCCCTGGGTaGGGCAGGGGTGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: VQCLPHSTPNTDQSLVPAHVGPG*GRGGGD
Trigger: GTCCCCACCACCCCTGCCCCACCCAGGGCCAACATG...AGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACGGAACCGGAGGGTGGCGACTTaGGTCCTGCAGATGCCCAAC +
Preference number: 4 (lower is better)
Translates to: AHLQGIKEAGPRPHKRRNRRVAT*VLQMPN
Trigger: GTTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCG...GTTCCGTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTAGGTGGAGGGACTGCTaGGAGGGACTCTCCCAGACG +
Preference number: 4 (lower is better)
Translates to: GRHRSFLKSCGSFVQCVLRWRDC*EGLSQT
Trigger: CGTCTGGGAGAGTCCCTCCCAGCAGTCCCTCCACCT...AAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACATCCAGTGTGTCCTTATaGAGGTGGAGGGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: KGVTLPGRVHVTPSSSPTSSVSL*RWRDCW
Trigger: CCAGCAGTCCCTCCACCTCCATAAGGACACACTGGA...TGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGGGAGGTCCAGTGTGTCCTTATaGAGGTGGAGGGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: LREFCPVCPYGGGGTAGRSSVSL*RWRDCW
Trigger: CCAGCAGTCCCTCCACCTCCATAAGGACACACTGGA...CCTCCCAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GCCAAAGAGGCGAATGGAGGCAACAGTGGACAGCACAATGGACAGGGAGGTGGCTCCAGTGTGTCCTTATaGAGGTGGAGGGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: AKEANGGNSGQHNGQGGGSSVSL*RWRDCW
Trigger: CCAGCAGTCCCTCCACCTCCATAAGGACACACTGGA...GCCACCTCCCTGTCCATTGTGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR CCA 90 bp CTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGGGAGGAGAAAAACACAAAGCTaGGCTAGGCTGGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: LREFCPVCPYGGGGTAGRRKTQS*ARLAGG
Trigger: CCCGCCTGCCAGCCTAGCCCAGCTTTGTGTTTTTCT...CCTCCCAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
3UTR CAA 72 bp GAGGTGGCAAAGCCCTTGAGGATATTGTCAGCGTACTaGACAACCACAGCCACCAGTAGCCCGCCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: EVAKPLRILSAY*TTTATSSPPKA
Trigger: GGCCTTCGGCGGGCTACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATATCCTCAAGGGCTTTGCCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR TCA 90 bp AGGCTGCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTCAGCTCTGCAAGGTGTAGATaGGAGAGGGCACTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: RLRFSMSTENSAVVRIFSSARCR*ERALRA
Trigger: AGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGA...GCTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634665.1
ENST00000635628.1
CDS-3UTR TCA 90 bp TTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTCAGCTGGTATGTCGGCTGCGATTCAGCATaGGCACGGAGAACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: FSMSTENSAVVRIFSWYVGCDSA*ARRTAL
Trigger: CAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCC...GACATACCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634665.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGCCTGAGCTGCCTTTaGGGATCTTCTCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: LQGKGVTLPGRVHVTPSSSLSCL*GSSQSR
Trigger: TCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGCT...AGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGGAAGCCTGAGCTGCCTTTaGGGATCTTCTCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: RDSPRRETSRRGHRVGEGSLSCL*GSSQSR
Trigger: TCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGCT...TCCCTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCGTTCGTCCGCTTCACTaGTCGCGCTTTCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: NPASKEVRGSRGGSSKTPVRPLH*SRFPDH
Trigger: ATGATCTGGAAAGCGCGATCAGTGAAGCGGACGAAC...GGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376515.8
ENST00000376521.6
CDS-3UTR TCA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTTCACTTCACCAGCACTaGCTTTGGCAGAAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAASLHQH*LWQKGL
Trigger: GAGCCCTTTCTGCCAAAGTCAGTGCTGGTGAAGTGA...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCTCCAGAAGTCTCAGTaGCCTGGGAGAAAAGACCAT +
Preference number: 4 (lower is better)
Translates to: VTLPGRVHVTPSSSPTPLLQKSQ*PGRKDH
Trigger: ATGGTCTTTTCTCCCAGGTCACTGAGACTTCTGGAG...GAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGGGAGCAAACTATGGGCAACTaGACCCCACAGGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: AAGVLSSVSLWRWRDCWEQTMGN*TPQVGI
Trigger: GATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTG...CTCCCAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GCCAGCCCTCACTTCACCAGCACTGACTTTGGCAGAAAGGGCTCCGTGATGAGGAACCCTTCACCTTGGTaGGCAACCTGTGGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: ASPHFTSTDFGRKGSVMRNPSPW*ATCGGN
Trigger: ATTCCCACCACAGGTTGCTCACCAAGGTGAAGGGTT...CCTCATCACGGAGCCCTTTCTGCCAAAGTCAGTGCTGGTGAAGTGAGGGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR GCA 90 bp CTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGAGCGTGTCCACATACTaGACCAGGACAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: LGQGQEERTRPGQCLQSQSVSTY*TRTASW
Trigger: CCATGAGGCTGTCCTGGTGCAGTATGTGGACACGCT...CTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp TATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGCGTGTCCACATACTaGACCAGGACAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: YGQLNPTGRHRSFLKSCGSVSTY*TRTASW
Trigger: CCATGAGGCTGTCCTGGTGCAGTATGTGGACACGCT...CCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GGAAAGGCTGCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: GKAAIQHEHGEQRCGQDLDERGH*ELERVH
Trigger: GTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATC...AAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634665.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GAGTTCCAAGGACATTCTGAAGGTGACATAGCCCCTGTCCTCTGCAACACCCCCGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: EFQGHSEGDIAPVLCNTPDERGH*ELERVH
Trigger: GTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATC...GGGGGTGTTGCAGAGGACAGGGGCTATGTCACCTTCAGAATGTCCTTGGAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR GCA 90 bp GGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCACCCACCGGCTTGCTGTaGCTGGACAATGGCGACGCC +
Preference number: 4 (lower is better)
Translates to: GVQCLPHSTPNTDQSLVPPTGLL*LDNGDA
Trigger: GGCGTCGCCATTGTCCAGGCACAGCAAGCCGGTGGG...TGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp ACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCTCAAAGTAGACACCTaGGAAGCCGGAGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: TLPPKRLEGAEAAALKPPLKVDT*EAGGET
Trigger: TGTCTCTCCTCCGGCTTCGCAGGTGTCTACTTTGAG...AGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAGGCCCAGTGCTGTaGCGAAGAGGCCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: QCLPHSTPNTDQSLVPAGPGPVL*RRGPVA
Trigger: TGCAACTGGGCCTCTTCGGCACAGCACTGGGCCTGG...CCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp TCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTCCAGGCCCAGTGCTGTaGCGAAGAGGCCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: SVIPEELREFCPVCPYGGPGPVL*RRGPVA
Trigger: TGCAACTGGGCCTCTTCGGCACAGCACTGGGCCTGG...ACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCTGGGGACTCACAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGGGCTATGGCTTTGGCTaGACCTCGGGGAAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PGDSQEAHLQGIKEAGPRGYGFG*TSGKAV
Trigger: TACAGCCTTCCCCGAGGTGCAGCCAAAGCCATAGCC...CCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTGTGAGTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635628.1
CDS-3UTR GCA 90 bp CTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTTCATTCCTGAAGAGCTaGGGGAGTTTTGTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: LQGKGVTLPGRVHVTPSSSFLKS*GSFVQC
Trigger: ACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGA...AGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAAAGAAGCGGTCCCCTaGCAACGTGCGGGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: CLPHSTPNTDQSLVPAGPKEAVP*QRAGVA
Trigger: CGCTACGCCCGCACGTTGCCAGGGGACCGCTTCTTT...TGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTAAAGAAGCGGTCCCCTaGCAACGTGCGGGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: SVIPEELREFCPVCPYGGKEAVP*QRAGVA
Trigger: CGCTACGCCCGCACGTTGCCAGGGGACCGCTTCTTT...ACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAAAAGAAGCGGTCCCCTaGCAACGTGCGGGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: VYLTLPLILIRVWSQLGQKEAVP*QRAGVA
Trigger: CGCTACGCCCGCACGTTGCCAGGGGACCGCTTCTTT...TTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGAGATGGCAACATACTaGAGGTTATTCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: GRDSPRRETSRRGHRVGEEMATY*RLFCKV
Trigger: CACCTTGCAGAATAACCTCCAGTATGTTGCCATCTC...CTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTGGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGGAGATGGCAACATACTaGAGGTTATTCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: LGGTLPDEKPPEEGTGSGEMATY*RLFCKV
Trigger: CACCTTGCAGAATAACCTCCAGTATGTTGCCATCTC...CCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGGAGTCAGGATCTTCAGCTaGTATGTCACCTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: RDSPRRETSRRGHRVGEGVRIFS*YVTWKV
Trigger: CACTTTCCAGGTGACATACCAGCTGAAGATCCTGAC...TCCCTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AGGCTGCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTCAGCCGGAGAACAGCGCTGTaGTCAGGATCTTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RLRFSMSTENSAVVRIFSRRTAL*SGSSAG
Trigger: ACCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCG...GCTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634665.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGGAGAACAGCGCTGTaGTCAGGATCTTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LGQGQEERTRPGQCLQSQRRTAL*SGSSAG
Trigger: ACCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCG...CTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGAGGGTTCTGATCCAGTaGCCGTGGGCCTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: SSVYLTLPLILIRVWSQLRVLIQ*PWASPT
Trigger: GGTGGGGGAGGCCCACGGCCACTGGATCAGAACCCT...CAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGAGAGAAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCAAAAAGAAACCACGGGTaGCCACGGCGGTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: GEKASNYGQLNPTGRHRSKRNHG*PRRYPQ
Trigger: CTGAGGGTACCGCCGTGGCCACCCGTGGTTTCTTTT...TGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGGAATGGAGGCAACAGTaGACAGCACAATGGACAGGG +
Preference number: 4 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKEWRQQ*TAQWTG
Trigger: CCCTGTCCATTGTGCTGTCCACTGTTGCCTCCATTC...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGAGCCAAAGAGGCGAATaGAGGCAACAGTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKSQRGE*RQQWTA
Trigger: TGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCT...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGGGAGGAGAGAAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCAGAGGCAGAGGCTATaGCTTTGGCTGCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: KGGEKASNYGQLNPTGRHQRQRL*LWLHLG
Trigger: CCCGAGGTGCAGCCAAAGCCATAGCCTCTGCCTCTG...ATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTCTCTCCTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCGGGGCTGAGCTGAGGTaGGTCATGAGAGAGCTTAGT +
Preference number: 4 (lower is better)
Translates to: PAGPRARRENEARPMSSIGAELR*VMRELS
Trigger: ACTAAGCTCTCTCATGACCCACCTCAGCTCAGCCCC...GATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGCACCTCGGGGAAGGCTaGAAAGTGGCAGCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: ASNYGQLNPTGRHRSFLKHLGEG*KVAAGR
Trigger: CCTACCAGCTGCCACTTTCCAGCCTTCCCCGAGGTG...CTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445167.7
CDS-3UTR CCA 90 bp CAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACAACCGCTGCCATGTTaGCATCTGCCCGGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: QEAHLQGIKEAGPRPHKRQPLPC*HLPGPS
Trigger: GGACGGGCCGGGCAGATGCCAACATGGCAGCGGTTG...TCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000445167.7
CDS-3UTR CCA 90 bp AAGCTGGCCCAAGGCCACACAAAAGACGGAACTAGTAACATGATCCAGAGCGGTCGGAGGGTGGCGACTTaGGTCCTGCAGATGCCCAAC +
Preference number: 4 (lower is better)
Translates to: KLAQGHTKDGTSNMIQSGRRVAT*VLQMPN
Trigger: GTTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCG...ACCGCTCTGGATCATGTTACTAGTTCCGTCTTTTGTGTGGCCTTGGGCCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GCCCAAGGCCACACAAAAGACGGAACTAGTAACATGATCCAGAGCGGTGGTAAGCGGAGGGTGGCGACTTaGGTCCTGCAGATGCCCAAC +
Preference number: 4 (lower is better)
Translates to: AQGHTKDGTSNMIQSGGKRRVAT*VLQMPN
Trigger: GTTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCG...CTTACCACCGCTCTGGATCATGTTACTAGTTCCGTCTTTTGTGTGGCCTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTGAAGGCCTCAAACTATaGGCAACTGAACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAAEGLKL*ATEPHR
Trigger: CCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTC...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGGAAGGCCTCAAACTATaGGCAACTGAACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKEGLKL*ATEPHR
Trigger: CCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTC...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCGTAATGGTGCCCACCTaGTCAGAAAGCTACACGTGG +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTVMVPT*SESYTW
Trigger: CCACGTGTAGCTTTCTGACCAGGTGGGCACCATTAC...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR TCA 90 bp GAGTTCCAAGGACATTCTGAAGGTGACATAGCCCCTGTCCTCTGCAACACCCCCTCTGCAAGGTGTAGATaGGAGAGGGCACTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: EFQGHSEGDIAPVLCNTPSARCR*ERALRA
Trigger: AGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGA...GGGGGTGTTGCAGAGGACAGGGGCTATGTCACCTTCAGAATGTCCTTGGAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR TCA 90 bp CCAGGCCAATGTCTTCAATCCCAGCGGCTAGGAACCCTTCACCTTGGTGAGCAATCTGCAAGGTGTAGATaGGAGAGGGCACTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: PGQCLQSQRLGTLHLGEQSARCR*ERALRA
Trigger: AGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGA...TTGCTCACCAAGGTGAAGGGTTCCTAGCCGCTGGGATTGAAGACATTGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AAAGACGGAACTAGTAACATGATCCAGAGCGGTGGTAAGGGAGGAGAGAAGGCCGGCTGCGATTCAGCATaGGCACGGAGAACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: KDGTSNMIQSGGKGGEKAGCDSA*ARRTAL
Trigger: CAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCC...GGCCTTCTCTCCTCCCTTACCACCGCTCTGGATCATGTTACTAGTTCCGTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGAGCCTGAGCTGCCTTTaGGGATCTTCTCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: ASKEVRGSRGGSSKTPSRSLSCL*GSSQSR
Trigger: TCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGCT...CCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp ATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGCAGCCACACGGAGCCTaGGCTGCCTTTGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: IPEELREFCPVCPYGGGGQPHGA*AAFEDL
Trigger: AAGATCCTCAAAGGCAGCTCAGGCTCCGTGTGGCTG...CCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGTATTGTCAGCGTACTTaGCAACCACAGCCACCAGTA +
Preference number: 4 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGYCQRT*QPQPPV
Trigger: TACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATA...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGTATTGTCAGCGTACTTaGCAACCACAGCCACCAGTA +
Preference number: 4 (lower is better)
Translates to: ASKEVRGSRGGSSKTPSRYCQRT*QPQPPV
Trigger: TACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATA...CCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp ACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTAGGTGGCAAAGCCCTTaGGGATATTGTCAGCGTACT +
Preference number: 4 (lower is better)
Translates to: TLPPKRLEGAEAAALKPPRWQSP*GYCQRT
Trigger: AGTACGCTGACAATATCCTCAAGGGCTTTGCCACCT...AGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp ATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAGGTGGCAAAGCCCTTaGGGATATTGTCAGCGTACT +
Preference number: 4 (lower is better)
Translates to: IPPTLPPKRLEGAEAAALRWQSP*GYCQRT
Trigger: AGTACGCTGACAATATCCTCAAGGGCTTTGCCACCT...TAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp TCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCAAGAAGAGGTAGACAGCACCAATaGCGAGTCCAGCGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: STPNTDQSLVPAGPRARRGRQHQ*RVQRQG
Trigger: CCCTTGGCGCTGGACTCGTCATTGGTGCTGTCTACC...TCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCCTCCAGAAGTCTCAGTaGCCTGGGAGAAAAGACCAT +
Preference number: 4 (lower is better)
Translates to: NPASKEVRGSRGGSSKTPLQKSQ*PGRKDH
Trigger: ATGGTCTTTTCTCCCAGGTCACTGAGACTTCTGGAG...GGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGCTCCAGAAGTCTCAGTaGCCTGGGAGAAAAGACCAT +
Preference number: 4 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKLQKSQ*PGRKDH
Trigger: ATGGTCTTTTCTCCCAGGTCACTGAGACTTCTGGAG...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTCCAGAAGTCTCAGTaGCCTGGGAGAAAAGACCAT +
Preference number: 4 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAALQKSQ*PGRKDH
Trigger: ATGGTCTTTTCTCCCAGGTCACTGAGACTTCTGGAG...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCATCAATCCCAAGACACCCCCACGGAACTAGTAACATaGTCCAGAGCGGTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: LWGAQEAGSTVHQSQDTPTELVT*SRAVVR
Trigger: CCTTACCACCGCTCTGGATCATGTTACTAGTTCCGT...GGGGGTGTCTTGGGATTGATGAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR TCA 90 bp GCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGGGAGACGGAACTAGTAACATaGTCCAGAGCGGTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: AAGVLSSVSLWRWRDCWETELVT*SRAVVR
Trigger: CCTTACCACCGCTCTGGATCATGTTACTAGTTCCGT...CTCCCAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp AAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGGTTACCCCTCTTCTGTaGGAAGAGCAGCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KSCGSFVQCVLMEVEGLLVTPLL*EEQQQA
Trigger: TGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGTAAC...CAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCAGACAGCCTGGCCCCAGAATCCAGGCTCTTTAACCATTTCACAAAGCTGCCCGTTACCCCTCTTCTGTaGGAAGAGCAGCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PDSLAPESRLFNHFTKLPVTPLL*EEQQQA
Trigger: TGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGTAAC...GGGCAGCTTTGTGAAATGGTTAAAGAGCCTGGATTCTGGGGCCAGGCTGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR GCA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTAGGAAGAGAACCAGGTaGTTCACGTTACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAARKRTR*FTLPLF
Trigger: GAAGAGGGGTAACGTGAAGCACCTGGTTCTCTTCCT...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGAGGAAGAGAACCAGGTaGTTCACGTTACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GPRARRENEARPMSSIPARKRTR*FTLPLF
Trigger: GAAGAGGGGTAACGTGAAGCACCTGGTTCTCTTCCT...CGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCAGGAAGAGAACCAGGTaGTTCACGTTACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTRKRTR*FTLPLF
Trigger: GAAGAGGGGTAACGTGAAGCACCTGGTTCTCTTCCT...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp AAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGAGCGTGTCCACATACTaGACCAGGACAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: KSCGSFVQCVLMEVEGLLSVSTY*TRTASW
Trigger: CCATGAGGCTGTCCTGGTGCAGTATGTGGACACGCT...CAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR GCA 90 bp TCTCCCTGGGGACTCACAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAGCGTGTCCACATACTaGACCAGGACAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: SPWGLTRSPSSRYQGSWPSVSTY*TRTASW
Trigger: CCATGAGGCTGTCCTGGTGCAGTATGTGGACACGCT...GGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTGTGAGTCCCCAGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR GCA 90 bp TGGTGGGGACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: WWGQGVQCLPHSTPNTDQDERGH*ELERVH
Trigger: GTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATC...CTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTCCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCTCAAAGTAGACACCTaGGAAGCCGGAGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: PSWAKGKKRERGQANVFNLKVDT*EAGGET
Trigger: TGTCTCTCCTCCGGCTTCGCAGGTGTCTACTTTGAG...ATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGGCTCTCAAAGTAGACACCTaGGAAGCCGGAGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: PRARRENEARPMSSIPAALKVDT*EAGGET
Trigger: TGTCTCTCCTCCGGCTTCGCAGGTGTCTACTTTGAG...AGCCGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp ACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCGGCTATGGCTTTGGCTaGACCTCGGGGAAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: TGRHRSFLKSCGSFVQCVGYGFG*TSGKAV
Trigger: TACAGCCTTCCCCGAGGTGCAGCCAAAGCCATAGCC...GACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACGGAACTGGCTATGGCTTTGGCTaGACCTCGGGGAAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PIFKVSRKLAQGHTKDGTGYGFG*TSGKAG
Trigger: TCCAGCCTTCCCCGAGGTGCAGCCAAAGCCATAGCC...AGTTCCGTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445167.7
CDS-3UTR GCA 90 bp CGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGAGACCCGCCTTATCCTaGCGTTCGTCCGCTTCACTG +
Preference number: 4 (lower is better)
Translates to: RSFLKSCGSFVQCVLMEVRPALS*RSSASL
Trigger: CAGTGAAGCGGACGAACGGCAGGATAAGGCGGGTCT...CACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376515.8
ENST00000376521.6
CDS-3UTR CCA 90 bp AACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGATGAGGGAGGCATTCTaGACCACCAGCACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: NPTGRHRSFLKSCGSFVQMREAF*TTSTAR
Trigger: CCTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCAT...CTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGTGGTGGGGACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCATGAGGGAGGCATTCTaGACCACCAGCACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: GGGDRESSVYLTLPLILIMREAF*TTSTAR
Trigger: CCTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCAT...GATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTCCCCACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGAAAGAAGCGGTCCCCTaGCAACGTGCGGGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: DRESSVYLTLPLILIRVWKEAVP*QRAGVA
Trigger: CGCTACGCCCGCACGTTGCCAGGGGACCGCTTCTTT...CCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGGAGAGATGGCAACATACTaGAGGTTATTCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: RDSPRRETSRRGHRVGEGEMATY*RLFCKV
Trigger: CACCTTGCAGAATAACCTCCAGTATGTTGCCATCTC...TCCCTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGGTCAGGATCTTCAGCTaGTATGTCACCTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGVRIFS*YVTWKV
Trigger: CACTTTCCAGGTGACATACCAGCTGAAGATCCTGAC...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGCCGGCTTGCTGTGCCTaGACAATGGCGACGCCAGTG +
Preference number: 4 (lower is better)
Translates to: DRESSVYLTLPLILIRVWPACCA*TMATPV
Trigger: CACTGGCGTCGCCATTGTCCAGGCACAGCAAGCCGG...CCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCAGGCCAATGTCTTCAATCCCAGCGGCTAGGAACCCTTCACCTTGGTGAGCAACAGTGGACAGCACAATaGACAGGGAGGTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: PGQCLQSQRLGTLHLGEQQWTAQ*TGRWQS
Trigger: GCTTTGCCACCTCCCTGTCCATTGTGCTGTCCACTG...TTGCTCACCAAGGTGAAGGGTTCCTAGCCGCTGGGATTGAAGACATTGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGCAGTGGACAGCACAATaGACAGGGAGGTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: KSCGSFVQCVLMEVEGLLQWTAQ*TGRWQS
Trigger: GCTTTGCCACCTCCCTGTCCATTGTGCTGTCCACTG...CAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCATCAATCCCAAGACACCCCCATGAATGGAGGCAACAGTaGACAGCACAATGGACAGGG +
Preference number: 4 (lower is better)
Translates to: LGSAGGRFHSSSIPRHPHEWRQQ*TAQWTG
Trigger: CCCTGTCCATTGTGCTGTCCACTGTTGCCTCCATTC...ATGGGGGTGTCTTGGGATTGATGAACTGTGGAACCTGCCTCCTGCGCTCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635628.1
CDS-3UTR CCA 90 bp AGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACGCAGAGGCAGAGGCTATaGCTTTGGCTGCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: RSPSSRYQGSWPKATQKTQRQRL*LWLHLG
Trigger: CCCGAGGTGCAGCCAAAGCCATAGCCTCTGCCTCTG...CGTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGAGGTCTCCACGGTaGGAAGACAGCTGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: GRHRSFLKSCGSFVQCVLMRSPR*EDSCGG
Trigger: ACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCAT...AAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCAGAGTTTGGTCCCAGCTaGGCCAAGGGCAAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PHSTPNTDQSLVPAGPRAEFGPS*AKGKKR
Trigger: TCTCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTC...TGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGGCTATACTGATCAGAGTTTaGTCCCAGCTGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: PRARRENEARPMSSIPAAILIRV*SQLGQG
Trigger: CCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTAT...AGCCGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTCAGCTGGTAGGGGCTGAGCTGAGGTaGGTCATGAGAGAGCTTAGT +
Preference number: 4 (lower is better)
Translates to: AIQHEHGEQRCGQDLQLVGAELR*VMRELS
Trigger: ACTAAGCTCTCTCATGACCCACCTCAGCTCAGCCCC...TACCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR CCA 90 bp AGGTTGAAGGAGTTCCAAGGACATTCTGAAGGTGACATAGCCCCTGTCCTCTGCGGCTTGGGGCTCACCTaGAAAGTGGCAGCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: RLKEFQGHSEGDIAPVLCGLGLT*KVAAGR
Trigger: CCTACCAGCTGCCACTTTCCAGGTGAGCCCCAAGCC...GCAGAGGACAGGGGCTATGTCACCTTCAGAATGTCCTTGGAACTCCTTCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR CCA 90 bp GCTCTATTTACATATAGCAAAGACAGCCCAGGCATCTTCCATGCACACACACACCCAGGCCCCGGAGGGTaGCGACTTGGGTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ALFTYSKDSPGIFHAHTHPGPGG*RLGSCR
Trigger: TCTGCAGGACCCAAGTCGCCACCCTCCGGGGCCTGG...GTGTGTGTGTGCATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAATAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR TCA 90 bp GGGTTAATAAGCTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCATCAATCCCTCTGCAAGGTGTAGATaGGAGAGGGCACTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: GLISFGERRRQVPQFINPSARCR*ERALRA
Trigger: AGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGA...GGGATTGATGAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAGCTTATTAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR TCA 90 bp GTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGCTGCGATTCAGCATaGGCACGGAGAACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: VQCLPHSTPNTDQSLVPAGCDSA*ARRTAL
Trigger: CAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCC...AGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTAGCCTGAGCTGCCTTTaGGGATCTTCTCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAASLSCL*GSSQSR
Trigger: TCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGCT...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp TGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCACAGCCACACGGAGCCTaGGCTGCCTTTGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: CLPHSTPNTDQSLVPAGPQPHGA*AAFEDL
Trigger: AAGATCCTCAAAGGCAGCTCAGGCTCCGTGTGGCTG...TGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp ACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTTATTGTCAGCGTACTTaGCAACCACAGCCACCAGTA +
Preference number: 4 (lower is better)
Translates to: TLPPKRLEGAEAAALKPPYCQRT*QPQPPV
Trigger: TACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATA...AGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGGGAGGTATTGTCAGCGTACTTaGCAACCACAGCCACCAGTA +
Preference number: 4 (lower is better)
Translates to: LREFCPVCPYGGGGTAGRYCQRT*QPQPPV
Trigger: TACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATA...CCTCCCAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GAGTTCCAAGGACATTCTGAAGGTGACATAGCCCCTGTCCTCTGCAACACCCCCCACAGAGAGGTTAGGTaGCGTGCCCCAAAATCACAC +
Preference number: 4 (lower is better)
Translates to: EFQGHSEGDIAPVLCNTPHREVR*RAPKSH
Trigger: GTGTGATTTTGGGGCACGTCACCTAACCTCTCTGTG...GGGGGTGTTGCAGAGGACAGGGGCTATGTCACCTTCAGAATGTCCTTGGAACTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR TCA 90 bp TCTCCCTGGGGACTCACAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCTCACTTCACCAGCACTaGCTTTGGCAGAAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SPWGLTRSPSSRYQGSWPSLHQH*LWQKGL
Trigger: GAGCCCTTTCTGCCAAAGTCAGTGCTGGTGAAGTGA...GGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTGTGAGTCCCCAGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR TCA 90 bp GGTGGTGGGGACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCCAAACTATGGGCAACTaGACCCCACAGGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: GGGDRESSVYLTLPLILIQTMGN*TPQVGI
Trigger: GATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTG...GATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTCCCCACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGACGGAACTAGTAACATaGTCCAGAGCGGTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: LGQGQEERTRPGQCLQSQTELVT*SRAVVR
Trigger: CCTTACCACCGCTCTGGATCATGTTACTAGTTCCGT...CTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGGGTCCCCGGCTCCAATaGACCCGCGGAAACCGCCCC +
Preference number: 4 (lower is better)
Translates to: QHILFAKTQLRDSVELAGGPRLQ*TRGNRP
Trigger: GGGGCGGTTTCCGCGGGTGCATTGGAGCCGGGGACC...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR GCA 90 bp AAGGGAGGAGAGAAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATGTTACCCCTCTTCTGTaGGAAGAGCAGCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KGGEKASNYGQLNPTGRHVTPLL*EEQQQA
Trigger: TGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGTAAC...ATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTCTCTCCTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCAGGAAGAGAACCAGGTaGTTCACGTTACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PAGPRARRENEARPMSSIRKRTR*FTLPLF
Trigger: GAAGAGGGGTAACGTGAAGCACCTGGTTCTCTTCCT...GATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp TTTACATATAGCAAAGACAGCCCAGGCATCTTCCATGCACACACACACCCCGCCGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: FTYSKDSPGIFHAHTHPADERGH*ELERVH
Trigger: GTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATC...GGCGGGGTGTGTGTGTGCATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR GCA 90 bp CCAATGGCTCTATTTACATATAGCAAAGACAGCCCAGGCATCTTCCATGCACACGACGGCTGCCAGGCCTaGCCCAGGGTTCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: PMALFTYSKDSPGIFHAHDGCQA*PRVLIQ
Trigger: CTGGATCAGAACCCTGGGGCAGGCCTGGCAGCCGTC...GTGTGCATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAATAGAGCCATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR GCA 90 bp GTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACGGAACTAGTAACATGATCCCGAAGAGGCCCAGTTaGAGGTTGCGCAGCCACACG +
Preference number: 4 (lower is better)
Translates to: VSRKLAQGHTKDGTSNMIPKRPS*RLRSHT
Trigger: CGTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGG...GATCATGTTACTAGTTCCGTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp TCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCAAGAAGAGGCTATGGCTTTGGCTaGACCTCGGGGAAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: STPNTDQSLVPAGPRARRGYGFG*TSGKAV
Trigger: TACAGCCTTCCCCGAGGTGCAGCCAAAGCCATAGCC...TCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp TTTACATATAGCAAAGACAGCCCAGGCATCTTCCATGCACACACACACCCCGCCGGCTATGGCTTTGGCTaGACCTCGGGGAAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: FTYSKDSPGIFHAHTHPAGYGFG*TSGKAV
Trigger: TACAGCCTTCCCCGAGGTGCAGCCAAAGCCATAGCC...GGCGGGGTGTGTGTGTGCATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635628.1
CDS-3UTR CCA 90 bp TCAGCCACTTCAAGGACCTCCATTTTTCCCACACCCTGGATCATTAATGATATGGCCTGTGAGCCGCACTaGCGGTCCCCGGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: SATSRTSIFPTPWIINDMACEPH*RSPAPM
Trigger: CATTGGAGCCGGGGACCGCCAGTGCGGCTCACAGGC...CATATCATTAATGATCCAGGGTGTGGGAAAAATGGAGGTCCTTGAAGTGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000445167.7
CDS-3UTR CCA 90 bp CTGCAGCCGGGAAAGGCTGCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTGAGATGGCAACATACTaGAGGTTATTCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: LQPGKAAIQHEHGEQRCGEMATY*RLFCKV
Trigger: CACCTTGCAGAATAACCTCCAGTATGTTGCCATCTC...ACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCTTTCCCGGCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634665.1
ENST00000635628.1
CDS-3UTR CCA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTGTCAGGATCTTCAGCTaGTATGTCACCTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAAVRIFS*YVTWKV
Trigger: CACTTTCCAGGTGACATACCAGCTGAAGATCCTGAC...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACAGTCAGGATCTTCAGCTaGTATGTCACCTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: KGVTLPGRVHVTPSSSPTVRIFS*YVTWKV
Trigger: CACTTTCCAGGTGACATACCAGCTGAAGATCCTGAC...TGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGCGGAGAACAGCGCTGTaGTCAGGATCTTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KASNYGQLNPTGRHRSFLRRTAL*SGSSAG
Trigger: ACCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCG...CAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGCGGAGAACAGCGCTGTaGTCAGGATCTTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RSFLKSCGSFVQCVLMEVRRTAL*SGSSAG
Trigger: ACCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCG...CACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGTGGTGGGGACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGCCAAAGAGGCGAATaGAGGCAACAGTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: GGGDRESSVYLTLPLILISQRGE*RQQWTA
Trigger: TGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCT...GATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTCCCCACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGAATAATGGGTCCACGTaGAAGCCAAAGAGGCGAATG +
Preference number: 4 (lower is better)
Translates to: GPRARRENEARPMSSIPANNGST*KPKRRM
Trigger: CATTCGCCTCTTTGGCTTCCACGTGGACCCATTATT...CGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTAATAATGGGTCCACGTaGAAGCCAAAGAGGCGAATG +
Preference number: 4 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAANNGST*KPKRRM
Trigger: CATTCGCCTCTTTGGCTTCCACGTGGACCCATTATT...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGAATAATGGGTCCACGTaGAAGCCAAAGAGGCGAATG +
Preference number: 4 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKNNGST*KPKRRM
Trigger: CATTCGCCTCTTTGGCTTCCACGTGGACCCATTATT...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp ATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAATAATGGGTCCACGTaGAAGCCAAAGAGGCGAATG +
Preference number: 4 (lower is better)
Translates to: IPPTLPPKRLEGAEAAALNNGST*KPKRRM
Trigger: CATTCGCCTCTTTGGCTTCCACGTGGACCCATTATT...TAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACCAGAGGCTATGGCTTTaGCTGCACCTCGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KKPIFKVSRKLAQGHTKDQRLWL*LHLGEG
Trigger: GCCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTG...GTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGCAGCTGCGGTGGTGGTaGCTGCCCGGGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QHILFAKTQLRDSVELAGQLRWW*LPGRLL
Trigger: CAGCAGCCTCCCGGGCAGCCACCACCACCGCAGCTG...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTATGAGGTCTCCACGGTaGGAAGACAGCTGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: SVIPEELREFCPVCPYGGMRSPR*EDSCGG
Trigger: ACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCAT...ACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp ATTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTCAGCTGGTATGTATGAGGTCTCCACGGTaGGAAGACAGCTGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: IQHEHGEQRCGQDLQLVCMRSPR*EDSCGG
Trigger: ACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCAT...ACATACCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR CCA 90 bp CCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCTTGGTGAGCAACTTTaGCAGAAAGGGCTCCGTGAT +
Preference number: 4 (lower is better)
Translates to: PAGPRARRENEARPMSSILGEQL*QKGLRD
Trigger: ATCACGGAGCCCTTTCTGCCAAAGTTGCTCACCAAG...GATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000247138.11
CDS-3UTR CCA 90 bp AAAGGGAGGTTGAAGGAGTTCCAAGGACATTCTGAAGGTGACATAGCCCCTGTCGGCTTGGGGCTCACCTaGAAAGTGGCAGCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: KGRLKEFQGHSEGDIAPVGLGLT*KVAAGR
Trigger: CCTACCAGCTGCCACTTTCCAGGTGAGCCCCAAGCC...GACAGGGGCTATGTCACCTTCAGAATGTCCTTGGAACTCCTTCAACCTCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR CCA 90 bp ACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCTCCAGTGTGTCCTTATaGAGGTGGAGGGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: TGRHRSFLKSCGSFVQCVSSVSL*RWRDCW
Trigger: CCAGCAGTCCCTCCACCTCCATAAGGACACACTGGA...GACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGTAAGGGAGGAGAGAAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGGAAGGCCTCAAACTATaGGCAACTGAACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: GKGGEKASNYGQLNPTGREGLKL*ATEPHR
Trigger: CCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTC...CCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTCTCTCCTCCCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGAGAGAAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCAGAAGGCCTCAAACTATaGGCAACTGAACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: GEKASNYGQLNPTGRHRSEGLKL*ATEPHR
Trigger: CCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTC...TGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCATCAATCCCAAGACACCCCCATCTCAAAGTAGACACCTaGAAAGTGGCAGCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LGSAGGRFHSSSIPRHPHLKVDT*KVAAGR
Trigger: CCTACCAGCTGCCACTTTCCAGGTGTCTACTTTGAG...ATGGGGGTGTCTTGGGATTGATGAACTGTGGAACCTGCCTCCTGCGCTCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413561.7
3UTR CAA 72 bp GTGGACAGCACAATGGACAGGGAGGTGGCAAAGCCCTaGAGGATATTGTCAGCGTACTTGACAACCACAGCC +
Preference number: 4 (lower is better)
Translates to: VDSTMDREVAKP*RILSAYLTTTA
Trigger: GGCTGTGGTTGTCAAGTACGCTGACAATATCCTCAAGGGCTTTGCCACCTCCCTGTCCATTGTGCTGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR TCA 90 bp CAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGAAGGGCACTGCGAGCTTaGGCGTGTCCACATACTGCA +
Preference number: 4 (lower is better)
Translates to: QEAHLQGIKEAGPRPHKRRALRA*ACPHTA
Trigger: TGCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCT...TCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAATCTGCAAGGTGTAGATaGGAGAGGGCACTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: VYLTLPLILIRVWSQLGQSARCR*ERALRA
Trigger: AGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGA...TTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGCCTGCCCCAGGGTTCTaGTCCAGTGGCCGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: QHILFAKTQLRDSVELAGPAPGF*SSGRGP
Trigger: AGGCCCACGGCCACTGGATCAGAACCCTGGGGCAGG...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CCCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATAGCCTGAGCTGCCTTTaGGGATCTTCTCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: PSWAKGKKRERGQANVFNSLSCL*GSSQSR
Trigger: TCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGCT...ATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CACTTCACCAGCACTGACTTTGGCAGAAAGGGCTCCGTGATGAGGTCTCCACGGAGCCTGAGCTGCCTTTaGGGATCTTCTCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: HFTSTDFGRKGSVMRSPRSLSCL*GSSQSR
Trigger: TCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGCT...CCGTGGAGACCTCATCACGGAGCCCTTTCTGCCAAAGTCAGTGCTGGTGAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413561.7
ENST00000635628.1
CDS-3UTR TCA 90 bp TCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGCAGCCACACGGAGCCTaGGCTGCCTTTGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: SSVYLTLPLILIRVWSQLQPHGA*AAFEDL
Trigger: AAGATCCTCAAAGGCAGCTCAGGCTCCGTGTGGCTG...CAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACAGCCACACGGAGCCTaGGCTGCCTTTGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: QEAHLQGIKEAGPRPHKRQPHGA*AAFEDL
Trigger: AAGATCCTCAAAGGCAGCTCAGGCTCCGTGTGGCTG...TCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCTATTGTCAGCGTACTTaGCAACCACAGCCACCAGTA +
Preference number: 4 (lower is better)
Translates to: PAGPRARRENEARPMSSIYCQRT*QPQPPV
Trigger: TACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATA...GATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp TGGCCCCAGAATCCAGGCTCTTTAACCATTTCACAAAGCTGCCCACAAATAGCCAGCAGAGCTGAGATTTaGACCCAGACAGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: WPQNPGSLTISQSCPQIASRAEI*TQTAWP
Trigger: GGGCCAGGCTGTCTGGGTTCAAATCTCAGCTCTGCT...GGCTATTTGTGGGCAGCTTTGTGAAATGGTTAAAGAGCCTGGATTCTGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR TCA 90 bp GCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGGTTCGTCCGCTTCACTaGTCGCGCTTTCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: ASNYGQLNPTGRHRSFLKVRPLH*SRFPDH
Trigger: ATGATCTGGAAAGCGCGATCAGTGAAGCGGACGAAC...CTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376521.6
CDS-3UTR TCA 90 bp ACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCTCACTTCACCAGCACTaGCTTTGGCAGAAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: TGRHRSFLKSCGSFVQCVSLHQH*LWQKGL
Trigger: GAGCCCTTTCTGCCAAAGTCAGTGCTGGTGAAGTGA...GACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp TGGTGGGGACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGTCACTTCACCAGCACTaGCTTTGGCAGAAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: WWGQGVQCLPHSTPNTDQSLHQH*LWQKGL
Trigger: GAGCCCTTTCTGCCAAAGTCAGTGCTGGTGAAGTGA...CTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTCCCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GGTGAGGCTGGTAGTCCTGGGGTTAGTAATGGTGCCCACCTGGTCAGAAAGCTACTCCAGAAGTCTCAGTaGCCTGGGAGAAAAGACCAT +
Preference number: 4 (lower is better)
Translates to: GEAGSPGVSNGAHLVRKLLQKSQ*PGRKDH
Trigger: ATGGTCTTTTCTCCCAGGTCACTGAGACTTCTGGAG...TAGCTTTCTGACCAGGTGGGCACCATTACTAACCCCAGGACTACCAGCCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR TCA 90 bp GGTAAGGGAGGAGAGAAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCTCCAGAAGTCTCAGTaGCCTGGGAGAAAAGACCAT +
Preference number: 4 (lower is better)
Translates to: GKGGEKASNYGQLNPTGRLQKSQ*PGRKDH
Trigger: ATGGTCTTTTCTCCCAGGTCACTGAGACTTCTGGAG...CCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTCTCTCCTCCCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGCTCCAGAAGTCTCAGTaGCCTGGGAGAAAAGACCAT +
Preference number: 4 (lower is better)
Translates to: NPTGRHRSFLKSCGSFVQLQKSQ*PGRKDH
Trigger: ATGGTCTTTTCTCCCAGGTCACTGAGACTTCTGGAG...CTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp ACAGTTAAGGGGTTAATAAGCTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCGGCATCGGTCATTCCTaGAGAGCTGCGGGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: TVKGLISFGERRRQVPQFGIGHS*RAAGVL
Trigger: CAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCC...GAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAGCTTATTAACCCCTTAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR TCA 90 bp TGGTGGGGACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGCAAACTATGGGCAACTaGACCCCACAGGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: WWGQGVQCLPHSTPNTDQQTMGN*TPQVGI
Trigger: GATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTG...CTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTCCCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCTTCTGCCAGAAGGGCTaGTGCAAAAATCTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTFCQKG*CKNLSS
Trigger: AGAGCTAAGATTTTTGCATCAGCCCTTCTGGCAGAA...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR GCA 90 bp CCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCAAGGAAGAGAACCAGGTaGTTCACGTTACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PHSTPNTDQSLVPAGPRARKRTR*FTLPLF
Trigger: GAAGAGGGGTAACGTGAAGCACCTGGTTCTCTTCCT...TGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GGAGAGAAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCAAGGAAGAGAACCAGGTaGTTCACGTTACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GEKASNYGQLNPTGRHRSRKRTR*FTLPLF
Trigger: GAAGAGGGGTAACGTGAAGCACCTGGTTCTCTTCCT...TGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp TGGCCCCAGAATCCAGGCTCTTTAACCATTTCACAAAGCTGCCCACAAATAGCCGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: WPQNPGSLTISQSCPQIADERGH*ELERVH
Trigger: GTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATC...GGCTATTTGTGGGCAGCTTTGTGAAATGGTTAAAGAGCCTGGATTCTGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR GCA 90 bp TATCCTAGCATCTCAGTGAACAGGCATTACTATTTCCACCCCCAATTTTCACAGTGCCATGTTGGCATCTaGCCGGCCCGTCCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: YPSISVNRHYYFHPQFSQCHVGI*PARPLG
Trigger: GCCGAGGGGACGGGCCGGGCAGATGCCAACATGGCA...CTGTGAAAATTGGGGGTGGAAATAGTAATGCCTGTTCACTGAGATGCTAGGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000634461.1
CDS-3UTR GCA 90 bp AAGCTGCCCACAAATAGCCTAAAGCTTATCTGTCACCAATCAAGGGCTCTTCACGTTCCTCTGGGGCCATaGTGGGCTTGGGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: KLPTNSLKLICHQSRALHVPLGP*WAWGSP
Trigger: AGGTGAGCCCCAAGCCCAGCATGGCCCCAGAGGAAC...GTGAAGAGCCCTTGATTGGTGACAGATAAGCTTTAGGCTATTTGTGGGCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR GCA 90 bp CCTAGCATCTCAGTGAACAGGCATTACTATTTCCACCCCCAATTTTCACAGACGGTTCCTCTGGGGCCATaGTGGGCTTGGGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: PSISVNRHYYFHPQFSQTVPLGP*WAWGSP
Trigger: AGGTGAGCCCCAAGCCCAGCATGGCCCCAGAGGAAC...CGTCTGTGAAAATTGGGGGTGGAAATAGTAATGCCTGTTCACTGAGATGCTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR GCA 90 bp CCCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATTCATTCCTGAAGAGCTaGGGGAGTTTTGTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PSWAKGKKRERGQANVFNSFLKS*GSFVQC
Trigger: ACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGA...ATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAATGAGGGAGGCATTCTaGACCACCAGCACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: CLPHSTPNTDQSLVPAGPMREAF*TTSTAR
Trigger: CCTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCAT...TGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACAGAGATGGCAACATACTaGAGGTTATTCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: KGVTLPGRVHVTPSSSPTEMATY*RLFCKV
Trigger: CACCTTGCAGAATAACCTCCAGTATGTTGCCATCTC...TGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACAAAAGAAACCACGGGTaGCCACGGCGGTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: KKPIFKVSRKLAQGHTKDKRNHG*PRRYPQ
Trigger: CTGAGGGTACCGCCGTGGCCACCCGTGGTTTCTTTT...GTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAGCCAAAGAGGCGAATaGAGGCAACAGTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: KASNYGQLNPTGRHRSFLSQRGE*RQQWTA
Trigger: TGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCT...CAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCAATAATGGGTCCACGTaGAAGCCAAAGAGGCGAATG +
Preference number: 4 (lower is better)
Translates to: PAGPRARRENEARPMSSINNGST*KPKRRM
Trigger: CATTCGCCTCTTTGGCTTCCACGTGGACCCATTATT...GATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAATGAGGTCTCCACGGTaGGAAGACAGCTGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: GVQCLPHSTPNTDQSLVPMRSPR*EDSCGG
Trigger: ACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCAT...TGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CACACAAAAGACGGAACTAGTAACATGATCCAGAGCGGTGGTAAGGGAGGAGAGATGAGGTCTCCACGGTaGGAAGACAGCTGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: HTKDGTSNMIQSGGKGGEMRSPR*EDSCGG
Trigger: ACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCAT...CTCTCCTCCCTTACCACCGCTCTGGATCATGTTACTAGTTCCGTCTTTTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAGAGTTTGGTCCCAGCTaGGCCAAGGGCAAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: CLPHSTPNTDQSLVPAGPEFGPS*AKGKKR
Trigger: TCTCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTC...TGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATACTGATCAGAGTTTaGTCCCAGCTGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GRHRSFLKSCGSFVQCVLILIRV*SQLGQG
Trigger: CCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTAT...AAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGCATGTTGGCCCTGGGTaGGGCAGGGGTGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QHILFAKTQLRDSVELAGHVGPG*GRGGGD
Trigger: GTCCCCACCACCCCTGCCCCACCCAGGGCCAACATG...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GCCCAAGGCCACACAAAAGACGGAACTAGTAACATGATCCAGAGCGGTGGTAAGGGGGCTGAGCTGAGGTaGGTCATGAGAGAGCTTAGT +
Preference number: 4 (lower is better)
Translates to: AQGHTKDGTSNMIQSGGKGAELR*VMRELS
Trigger: ACTAAGCTCTCTCATGACCCACCTCAGCTCAGCCCC...CTTACCACCGCTCTGGATCATGTTACTAGTTCCGTCTTTTGTGTGGCCTTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCAATGGCTCTATTTACATATAGCAAAGACAGCCCAGGCATCTTCCATGCACACAGGTGGAGGGACTGCTaGGAGGGACTCTCCCAGACG +
Preference number: 4 (lower is better)
Translates to: PMALFTYSKDSPGIFHAHRWRDC*EGLSQT
Trigger: CGTCTGGGAGAGTCCCTCCCAGCAGTCCCTCCACCT...GTGTGCATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAATAGAGCCATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR CCA 90 bp GTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGATCGTCAGGGTGGTaGCTTTTCTCCTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VQCLPHSTPNTDQSLVPAGSSGW*LFSSAP
Trigger: AGGAGCGGAGGAGAAAAGCCACCACCCTGACGATCC...AGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376521.6
CDS-3UTR CCA 90 bp GGTGAGGCTGGTAGTCCTGGGGTTAGTAATGGTGCCCACCTGGTCAGAAAGCTAAGGTATCAAGGAAGCTaGCCCAAGGCCACACAAAAG +
Preference number: 4 (lower is better)
Translates to: GEAGSPGVSNGAHLVRKLRYQGS*PKATQK
Trigger: CTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCT...TAGCTTTCTGACCAGGTGGGCACCATTACTAACCCCAGGACTACCAGCCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR CCA 90 bp AGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGGCTAGGAACCCTTCAAGGTATCAAGGAAGCTaGCCCAAGGCCACACAAAAG +
Preference number: 4 (lower is better)
Translates to: RENEARPMSSIPAARNPSRYQGS*PKATQK
Trigger: CTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCT...TGAAGGGTTCCTAGCCGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
3UTR CAA 72 bp ACAATGGACAGGGAGGTGGCAAAGCCCTTGAGGATATaGTCAGCGTACTTGACAACCACAGCCACCAGTAGC +
Preference number: 4 (lower is better)
Translates to: TMDREVAKPLRI*SAYLTTTATSS
Trigger: GCTACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATATCCTCAAGGGCTTTGCCACCTCCCTGTCCATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR TCA 90 bp TGGCCCCAGAATCCAGGCTCTTTAACCATTTCACAAAGCTGCCCACAAATAGCCTCTGCAAGGTGTAGATaGGAGAGGGCACTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: WPQNPGSLTISQSCPQIASARCR*ERALRA
Trigger: AGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGA...GGCTATTTGTGGGCAGCTTTGTGAAATGGTTAAAGAGCCTGGATTCTGGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR TCA 90 bp AGGTTGAAGGAGTTCCAAGGACATTCTGAAGGTGACATAGCCCCTGTCCTCTGCCACAGAGAGGTTAGGTaGCGTGCCCCAAAATCACAC +
Preference number: 4 (lower is better)
Translates to: RLKEFQGHSEGDIAPVLCHREVR*RAPKSH
Trigger: GTGTGATTTTGGGGCACGTCACCTAACCTCTCTGTG...GCAGAGGACAGGGGCTATGTCACCTTCAGAATGTCCTTGGAACTCCTTCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR TCA 90 bp TCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCAAGAAGACAAACTATGGGCAACTaGACCCCACAGGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: STPNTDQSLVPAGPRARRQTMGN*TPQVGI
Trigger: GATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTG...TCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AAGCTGGCCCAAGGCCACACAAAAGACGGAACTAGTAACATGATCCAGAGCGGTCAAACTATGGGCAACTaGACCCCACAGGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: KLAQGHTKDGTSNMIQSGQTMGN*TPQVGI
Trigger: GATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTG...ACCGCTCTGGATCATGTTACTAGTTCCGTCTTTTGTGTGGCCTTGGGCCAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp ACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCACGGAACTAGTAACATaGTCCAGAGCGGTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: TGRHRSFLKSCGSFVQCVTELVT*SRAVVR
Trigger: CCTTACCACCGCTCTGGATCATGTTACTAGTTCCGT...GACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGGTTACCCCTCTTCTGTaGGAAGAGCAGCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ESSVYLTLPLILIRVWSQVTPLL*EEQQQA
Trigger: TGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGTAAC...CTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp AAAGGGAGGTTGAAGGAGTTCCAAGGACATTCTGAAGGTGACATAGCCCCTGTCGTTACCCCTCTTCTGTaGGAAGAGCAGCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KGRLKEFQGHSEGDIAPVVTPLL*EEQQQA
Trigger: TGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGTAAC...GACAGGGGCTATGTCACCTTCAGAATGTCCTTGGAACTCCTTCAACCTCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR GCA 90 bp GCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGGAAGAGAACCAGGTaGTTCACGTTACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ASNYGQLNPTGRHRSFLKRKRTR*FTLPLF
Trigger: GAAGAGGGGTAACGTGAAGCACCTGGTTCTCTTCCT...CTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp TGGTGGGGACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGGAAGAGAACCAGGTaGTTCACGTTACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: WWGQGVQCLPHSTPNTDQRKRTR*FTLPLF
Trigger: GAAGAGGGGTAACGTGAAGCACCTGGTTCTCTTCCT...CTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTCCCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGAGCAGGGAGGCCCACTaGAGCCGGGAAAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: QHILFAKTQLRDSVELAGSREAH*SRERLR
Trigger: TCGCAGCCTTTCCCGGCTGCAGTGGGCCTCCCTGCT...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GCCCAAGGCCACACAAAAGACGGAACTAGTAACATGATCCAGAGCGGTGGTAAGCTCAAAGTAGACACCTaGGAAGCCGGAGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: AQGHTKDGTSNMIQSGGKLKVDT*EAGGET
Trigger: TGTCTCTCCTCCGGCTTCGCAGGTGTCTACTTTGAG...CTTACCACCGCTCTGGATCATGTTACTAGTTCCGTCTTTTGTGTGGCCTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp TCAGCCACTTCAAGGACCTCCATTTTTCCCACACCCTGGATCATTAATGATATGCCGAAGAGGCCCAGTTaGAGGTTGCGCAGCCACACG +
Preference number: 4 (lower is better)
Translates to: SATSRTSIFPTPWIINDMPKRPS*RLRSHT
Trigger: CGTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGG...CATATCATTAATGATCCAGGGTGTGGGAAAAATGGAGGTCCTTGAAGTGGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635628.1
CDS-3UTR GCA 90 bp CTCTTTAACCATTTCACAAAGCTGCCCACAAATAGCCTAAAGCTTATCTGTCACTGCCATGTTGGCATCTaGCCGGCCCGTCCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LFNHFTKLPTNSLKLICHCHVGI*PARPLG
Trigger: GCCGAGGGGACGGGCCGGGCAGATGCCAACATGGCA...GTGACAGATAAGCTTTAGGCTATTTGTGGGCAGCTTTGTGAAATGGTTAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376512.2
CDS-3UTR GCA 90 bp GGAGAGAAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATCATTCCTGAAGAGCTaGGGGAGTTTTGTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: GEKASNYGQLNPTGRHRSSFLKS*GSFVQC
Trigger: ACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGA...TGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGGCTAGGAACCCTTCAGTCAGGATCTTCAGCTaGTATGTCACCTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: RENEARPMSSIPAARNPSVRIFS*YVTWKV
Trigger: CACTTTCCAGGTGACATACCAGCTGAAGATCCTGAC...TGAAGGGTTCCTAGCCGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCGGAGAACAGCGCTGTaGTCAGGATCTTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ESSVYLTLPLILIRVWSQRRTAL*SGSSAG
Trigger: ACCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCG...CTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCAAGAAGAGAATGGAGGCAACAGTaGACAGCACAATGGACAGGG +
Preference number: 4 (lower is better)
Translates to: STPNTDQSLVPAGPRARREWRQQ*TAQWTG
Trigger: CCCTGTCCATTGTGCTGTCCACTGTTGCCTCCATTC...TCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGCTGGCCCAAGGCCACACAAAAGACGGAACTAGTAACATGATCCAGAGCGGTGAATGGAGGCAACAGTaGACAGCACAATGGACAGGG +
Preference number: 4 (lower is better)
Translates to: KLAQGHTKDGTSNMIQSGEWRQQ*TAQWTG
Trigger: CCCTGTCCATTGTGCTGTCCACTGTTGCCTCCATTC...ACCGCTCTGGATCATGTTACTAGTTCCGTCTTTTGTGTGGCCTTGGGCCAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCGAATGGAGGCAACAGTaGACAGCACAATGGACAGGG +
Preference number: 4 (lower is better)
Translates to: SNYGQLNPTGRHRSFLKSEWRQQ*TAQWTG
Trigger: CCCTGTCCATTGTGCTGTCCACTGTTGCCTCCATTC...GCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp ACAGTTAAGGGGTTAATAAGCTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCGAATGGAGGCAACAGTaGACAGCACAATGGACAGGG +
Preference number: 4 (lower is better)
Translates to: TVKGLISFGERRRQVPQFEWRQQ*TAQWTG
Trigger: CCCTGTCCATTGTGCTGTCCACTGTTGCCTCCATTC...GAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAGCTTATTAACCCCTTAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635628.1
CDS-3UTR CCA 90 bp GTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAAGCCAAAGAGGCGAATaGAGGCAACAGTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: VYLTLPLILIRVWSQLGQSQRGE*RQQWTA
Trigger: TGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCT...TTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TATCCTAGCATCTCAGTGAACAGGCATTACTATTTCCACCCCCAATTTTCACAGCAACCGCTGCCATGTTaGCATCTGCCCGGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: YPSISVNRHYYFHPQFSQQPLPC*HLPGPS
Trigger: GGACGGGCCGGGCAGATGCCAACATGGCAGCGGTTG...CTGTGAAAATTGGGGGTGGAAATAGTAATGCCTGTTCACTGAGATGCTAGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000634461.1
CDS-3UTR CCA 90 bp GAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGTCCAGTGTGTCCTTATaGAGGTGGAGGGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: ESSVYLTLPLILIRVWSQSSVSL*RWRDCW
Trigger: CCAGCAGTCCCTCCACCTCCATAAGGACACACTGGA...CTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGGAAGGCCTCAAACTATaGGCAACTGAACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: QCLPHSTPNTDQSLVPAGEGLKL*ATEPHR
Trigger: CCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTC...CCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp TCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCAGGTGGCAAAGCCCTTaGGGATATTGTCAGCGTACT +
Preference number: 4 (lower is better)
Translates to: SNYGQLNPTGRHRSFLKSRWQSP*GYCQRT
Trigger: AGTACGCTGACAATATCCTCAAGGGCTTTGCCACCT...GCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACGAGGTGGCAAAGCCCTTaGGGATATTGTCAGCGTACT +
Preference number: 4 (lower is better)
Translates to: RSPSSRYQGSWPKATQKTRWQSP*GYCQRT
Trigger: AGTACGCTGACAATATCCTCAAGGGCTTTGCCACCT...CGTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AAGCTGCCCACAAATAGCCTAAAGCTTATCTGTCACCAATCAAGGGCTCTTCACAGCAGAGCTGAGATTTaGACCCAGACAGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KLPTNSLKLICHQSRALHSRAEI*TQTAWP
Trigger: GGGCCAGGCTGTCTGGGTTCAAATCTCAGCTCTGCT...GTGAAGAGCCCTTGATTGGTGACAGATAAGCTTTAGGCTATTTGTGGGCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR TCA 90 bp AAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACTCACTTCACCAGCACTaGCTTTGGCAGAAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: KKPIFKVSRKLAQGHTKDSLHQH*LWQKGL
Trigger: GAGCCCTTTCTGCCAAAGTCAGTGCTGGTGAAGTGA...GTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTCAGCTGGTATTCTGCCAGAAGGGCTaGTGCAAAAATCTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: AIQHEHGEQRCGQDLQLVFCQKG*CKNLSS
Trigger: AGAGCTAAGATTTTTGCATCAGCCCTTCTGGCAGAA...TACCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR TCA 90 bp TCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCAAGAAGAAACCCTTCACCTTGGTaGGCAACAAGAAGCCCATCT +
Preference number: 4 (lower is better)
Translates to: STPNTDQSLVPAGPRARRNPSPW*ATRSPS
Trigger: AGATGGGCTTCTTGTTGCTCACCAAGGTGAAGGGTT...TCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635285.1
CDS-3UTR GCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGGTCCCCGGCTCCAATaGACCCGCGGAAACCGCCCC +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELGPRLQ*TRGNRP
Trigger: GGGGCGGTTTCCGCGGGTGCATTGGAGCCGGGGACC...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR GCA 90 bp AGGTTGAAGGAGTTCCAAGGACATTCTGAAGGTGACATAGCCCCTGTCCTCTGCAGGAAGAGAACCAGGTaGTTCACGTTACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RLKEFQGHSEGDIAPVLCRKRTR*FTLPLF
Trigger: GAAGAGGGGTAACGTGAAGCACCTGGTTCTCTTCCT...GCAGAGGACAGGGGCTATGTCACCTTCAGAATGTCCTTGGAACTCCTTCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR GCA 90 bp CAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACTCAAAGTAGACACCTaGGAAGCCGGAGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: QEAHLQGIKEAGPRPHKRLKVDT*EAGGET
Trigger: TGTCTCTCCTCCGGCTTCGCAGGTGTCTACTTTGAG...TCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp TCTTTTAAGTATCCTAGCATCTCAGTGAACAGGCATTACTATTTCCACCCCCAAGAGCTCCGCCTCCCATaGGACTGCTCGGGCAGACTG +
Preference number: 4 (lower is better)
Translates to: SFKYPSISVNRHYYFHPQELRLP*DCSGRL
Trigger: CAGTCTGCCCGAGCAGTCGCATGGGAGGCGGAGCTC...TTGGGGGTGGAAATAGTAATGCCTGTTCACTGAGATGCTAGGATACTTAAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635015.1
CDS-3UTR CCA 90 bp TATCCTAGCATCTCAGTGAACAGGCATTACTATTTCCACCCCCAATTTTCACAGAAAGAAGCGGTCCCCTaGCAACGTGCGGGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: YPSISVNRHYYFHPQFSQKEAVP*QRAGVA
Trigger: CGCTACGCCCGCACGTTGCCAGGGGACCGCTTCTTT...CTGTGAAAATTGGGGGTGGAAATAGTAATGCCTGTTCACTGAGATGCTAGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR CCA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGAAAGAAGCGGTCCCCTaGCAACGTGCGGGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: QHILFAKTQLRDSVELAGKEAVP*QRAGVA
Trigger: CGCTACGCCCGCACGTTGCCAGGGGACCGCTTCTTT...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGGAGATGGCAACATACTaGAGGTTATTCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: KSCGSFVQCVLMEVEGLLEMATY*RLFCKV
Trigger: CACCTTGCAGAATAACCTCCAGTATGTTGCCATCTC...CAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTCAGCTGGTATGTCACCTGGAGATGGCAACATACTaGAGGTTATTCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: HEHGEQRCGQDLQLVCHLEMATY*RLFCKV
Trigger: CACCTTGCAGAATAACCTCCAGTATGTTGCCATCTC...CAGGTGACATACCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634665.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTCAGCTGGTATGTCGTCAGGATCTTCAGCTaGTATGTCACCTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: FSMSTENSAVVRIFSWYVVRIFS*YVTWKV
Trigger: CACTTTCCAGGTGACATACCAGCTGAAGATCCTGAC...GACATACCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634665.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACGGAACAATAATGGGTCCACGTaGAAGCCAAAGAGGCGAATG +
Preference number: 4 (lower is better)
Translates to: AHLQGIKEAGPRPHKRRNNNGST*KPKRRM
Trigger: CATTCGCCTCTTTGGCTTCCACGTGGACCCATTATT...GTTCCGTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGGAGGTTGAAGGAGTTCCAAGGACATTCTGAAGGTGACATAGCCCCTGTCCTCCCAAAATCACACAGCTaGAAGGTAGCAGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GRLKEFQGHSEGDIAPVLPKSHS*KVAELR
Trigger: TCTCAGCTCTGCTACCTTCCAGCTGTGTGATTTTGG...GAGGACAGGGGCTATGTCACCTTCAGAATGTCCTTGGAACTCCTTCAACCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR CCA 90 bp CAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGAGTAATGGTGCCCACCTaGTCAGAAAGCTACACGTGG +
Preference number: 4 (lower is better)
Translates to: QEAHLQGIKEAGPRPHKRVMVPT*SESYTW
Trigger: CCACGTGTAGCTTTCTGACCAGGTGGGCACCATTAC...TCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR CCA 90 bp CTCTTTAACCATTTCACAAAGCTGCCCACAAATAGCCTAAAGCTTATCTGTCACCTGTCTCACCCGCACTaGCGGTCCCCGGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: LFNHFTKLPTNSLKLICHLSHPH*RSPAPM
Trigger: CATTGGAGCCGGGGACCGCCAGTGCGGGTGAGACAG...GTGACAGATAAGCTTTAGGCTATTTGTGGGCAGCTTTGTGAAATGGTTAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635015.1
CDS-3UTR TCA 90 bp GTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAAGCCTGAGCTGCCTTTaGGGATCTTCTCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: VYLTLPLILIRVWSQLGQSLSCL*GSSQSR
Trigger: TCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGCT...TTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GCCCAAGGCCACACAAAAGACGGAACTAGTAACATGATCCAGAGCGGTGGTAAGAGCCTGAGCTGCCTTTaGGGATCTTCTCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: AQGHTKDGTSNMIQSGGKSLSCL*GSSQSR
Trigger: TCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGCT...CTTACCACCGCTCTGGATCATGTTACTAGTTCCGTCTTTTGTGTGGCCTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGCGCCGAAGGCCTGGTTaGGCACCACGCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELRRRPG*APRPRQ
Trigger: CTGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCG...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGAGGTGGCAAAGCCCTTaGGGATATTGTCAGCGTACT +
Preference number: 4 (lower is better)
Translates to: DRESSVYLTLPLILIRVWRWQSP*GYCQRT
Trigger: AGTACGCTGACAATATCCTCAAGGGCTTTGCCACCT...CCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGAACCCTTCACCTTGGTaGGCAACTTTGGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: DRESSVYLTLPLILIRVWNPSPW*ATLAER
Trigger: CCTTTCTGCCAAAGTTGCTCACCAAGGTGAAGGGTT...CCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000247138.11
CDS-3UTR TCA 90 bp AGGTTGAAGGAGTTCCAAGGACATTCTGAAGGTGACATAGCCCCTGTCCTCTGCCGAGAAAAGGGAGGTTaGAGGAGTTCCAAGGACATT +
Preference number: 4 (lower is better)
Translates to: RLKEFQGHSEGDIAPVLCREKGG*RSSKDI
Trigger: AATGTCCTTGGAACTCCTTCAACCTCCCTTTTCTCG...GCAGAGGACAGGGGCTATGTCACCTTCAGAATGTCCTTGGAACTCCTTCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR TCA 90 bp AACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTGGCATTGGATATCCTaGCATTTGTTCATTACAGTT +
Preference number: 4 (lower is better)
Translates to: NPASKEVRGSRGGSSKTPWHWIS*HLFITV
Trigger: AACTGTAATGAACAAATGTCAGGATATCCAATGCCA...GGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR GCA 90 bp CCTAGCATCTCAGTGAACAGGCATTACTATTTCCACCCCCAATTTTCACAGACGAGCGTGTCCACATACTaGACCAGGACAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: PSISVNRHYYFHPQFSQTSVSTY*TRTASW
Trigger: CCATGAGGCTGTCCTGGTGCAGTATGTGGACACGCT...CGTCTGTGAAAATTGGGGGTGGAAATAGTAATGCCTGTTCACTGAGATGCTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR GCA 90 bp TCTTTTAAGTATCCTAGCATCTCAGTGAACAGGCATTACTATTTCCACCCCCAAACCAGCCCCAACCGCTaGCATGTTGGCATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SFKYPSISVNRHYYFHPQTSPNR*HVGICP
Trigger: CGGGCAGATGCCAACATGGCAGCGGTTGGGGCTGGT...TTGGGGGTGGAAATAGTAATGCCTGTTCACTGAGATGCTAGGATACTTAAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000634461.1
CDS-3UTR GCA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGTGGCGACTTGGGTCCTaGAGATGCCCAACACCCTCC +
Preference number: 4 (lower is better)
Translates to: QHILFAKTQLRDSVELAGWRLGS*RCPTPS
Trigger: GGAGGGTGTTGGGCATCTGCAGGACCCAAGTCGCCA...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp AAAGACGGAACTAGTAACATGATCCAGAGCGGTGGTAAGGGAGGAGAGAAGGCCTCATTCCTGAAGAGCTaGGGGAGTTTTGTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: KDGTSNMIQSGGKGGEKASFLKS*GSFVQC
Trigger: ACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGA...GGCCTTCTCTCCTCCCTTACCACCGCTCTGGATCATGTTACTAGTTCCGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCCTGTGAGCCGCACTaGCGGTCCCCGGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELACEPH*RSPAPM
Trigger: CATTGGAGCCGGGGACCGCCAGTGCGGCTCACAGGC...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
CDS-3UTR CCA 90 bp CCTAGCATCTCAGTGAACAGGCATTACTATTTCCACCCCCAATTTTCACAGACGATGAGGGAGGCATTCTaGACCACCAGCACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: PSISVNRHYYFHPQFSQTMREAF*TTSTAR
Trigger: CCTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCAT...CGTCTGTGAAAATTGGGGGTGGAAATAGTAATGCCTGTTCACTGAGATGCTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR CCA 90 bp ATCTCAGTGAACAGGCATTACTATTTCCACCCCCAATTTTCACAGACGAGAAAAAAAGAAGCGGTCCCCTaGCAACGTGCGGGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: ISVNRHYYFHPQFSQTRKKEAVP*QRAGVA
Trigger: CGCTACGCCCGCACGTTGCCAGGGGACCGCTTCTTT...TTTTCTCGTCTGTGAAAATTGGGGGTGGAAATAGTAATGCCTGTTCACTGAGAT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR CCA 90 bp CGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGATGGCAACATACTaGAGGTTATTCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: RSFLKSCGSFVQCVLMEVEMATY*RLFCKV
Trigger: CACCTTGCAGAATAACCTCCAGTATGTTGCCATCTC...CACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CCAAAAATAAGCCTACATCTGGCAACTGACAGTGTCTTAAATACAATGAGATTCAGCCCGCCGAAGGCCTaGTTGAGCACCACGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PKISLHLATDSVLNTMRFSPPKA*LSTTPQ
Trigger: CTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGGGCT...GAATCTCATTGTATTTAAGACACTGTCAGTTGCCAGATGTAGGCTTATTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635628.1
CDS-3UTR CCA 90 bp TCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTAATAATGGGTCCACGTaGAAGCCAAAGAGGCGAATG +
Preference number: 4 (lower is better)
Translates to: SVIPEELREFCPVCPYGGNNGST*KPKRRM
Trigger: CATTCGCCTCTTTGGCTTCCACGTGGACCCATTATT...ACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AAGCTGGCCCAAGGCCACACAAAAGACGGAACTAGTAACATGATCCAGAGCGGTAATAATGGGTCCACGTaGAAGCCAAAGAGGCGAATG +
Preference number: 4 (lower is better)
Translates to: KLAQGHTKDGTSNMIQSGNNGST*KPKRRM
Trigger: CATTCGCCTCTTTGGCTTCCACGTGGACCCATTATT...ACCGCTCTGGATCATGTTACTAGTTCCGTCTTTTGTGTGGCCTTGGGCCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGCAGAGGCTATGGCTTTaGCTGCACCTCGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QHILFAKTQLRDSVELAGQRLWL*LHLGEG
Trigger: GCCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTG...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGAGACAGCTGCGGTGGTaGTGGCTGCCCGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELRQLRW*WLPGRL
Trigger: CAGCCTCCCGGGCAGCCACCACCACCGCAGCTGTCT...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGGAAGACAGCTGCGGTaGTGGTGGCTGCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELGRQLR*WWLPGR
Trigger: CCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCC...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TCAAAAATAAAGATCCAATGGCTCTATTTACATATAGCAAAGACAGCCCAGGCACATGTTGGCCCTGGGTaGGGCAGGGGTGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SKIKIQWLYLHIAKTAQAHVGPG*GRGGGD
Trigger: GTCCCCACCACCCCTGCCCCACCCAGGGCCAACATG...TGCCTGGGCTGTCTTTGCTATATGTAAATAGAGCCATTGGATCTTTATTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR CCA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGCACCTCGGGGAAGGCTaGAAAGTGGCAGCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: QHILFAKTQLRDSVELAGHLGEG*KVAAGR
Trigger: CCTACCAGCTGCCACTTTCCAGCCTTCCCCGAGGTG...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376529.8
CDS-3UTR CCA 90 bp AGGTTGAAGGAGTTCCAAGGACATTCTGAAGGTGACATAGCCCCTGTCCTCTGCCCAAAATCACACAGCTaGAAGGTAGCAGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RLKEFQGHSEGDIAPVLCPKSHS*KVAELR
Trigger: TCTCAGCTCTGCTACCTTCCAGCTGTGTGATTTTGG...GCAGAGGACAGGGGCTATGTCACCTTCAGAATGTCCTTGGAACTCCTTCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR TCA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGAGGGCACTGCGAGCTTaGGCGTGTCCACATACTGCA +
Preference number: 4 (lower is better)
Translates to: QHILFAKTQLRDSVELAGRALRA*ACPHTA
Trigger: TGCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCT...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR TCA 90 bp TCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGTATTGTCAGCGTACTTaGCAACCACAGCCACCAGTA +
Preference number: 4 (lower is better)
Translates to: SSVYLTLPLILIRVWSQLYCQRT*QPQPPV
Trigger: TACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATA...CAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR TCA 90 bp AAAGGGAGGTTGAAGGAGTTCCAAGGACATTCTGAAGGTGACATAGCCCCTGTCCGAGAAAAGGGAGGTTaGAGGAGTTCCAAGGACATT +
Preference number: 4 (lower is better)
Translates to: KGRLKEFQGHSEGDIAPVREKGG*RSSKDI
Trigger: AATGTCCTTGGAACTCCTTCAACCTCCCTTTTCTCG...GACAGGGGCTATGTCACCTTCAGAATGTCCTTGGAACTCCTTCAACCTCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR GCA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: QHILFAKTQLRDSVELAGDERGH*ELERVH
Trigger: GTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATC...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CACACAAAAGACGGAACTAGTAACATGATCCAGAGCGGTGGTAAGGGAGGAGAGTCATTCCTGAAGAGCTaGGGGAGTTTTGTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: HTKDGTSNMIQSGGKGGESFLKS*GSFVQC
Trigger: ACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGA...CTCTCCTCCCTTACCACCGCTCTGGATCATGTTACTAGTTCCGTCTTTTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGAGATGGCAACATACTaGAGGTTATTCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: VYLTLPLILIRVWSQLGQEMATY*RLFCKV
Trigger: CACCTTGCAGAATAACCTCCAGTATGTTGCCATCTC...TTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGTCAGGATCTTCAGCTaGTATGTCACCTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: VQCLPHSTPNTDQSLVPAVRIFS*YVTWKV
Trigger: CACTTTCCAGGTGACATACCAGCTGAAGATCCTGAC...AGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGATGAGGTCTCCACGGTaGGAAGACAGCTGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: QHILFAKTQLRDSVELAGMRSPR*EDSCGG
Trigger: ACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCAT...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CTATTTACATATAGCAAAGACAGCCCAGGCATCTTCCATGCACACACACACCCCAGGTATCAAGGAAGCTaGCCCAAGGCCACACAAAAG +
Preference number: 4 (lower is better)
Translates to: LFTYSKDSPGIFHAHTHPRYQGS*PKATQK
Trigger: CTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCT...GGGGTGTGTGTGTGCATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR TCA 90 bp GAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGTTCTGCCAGAAGGGCTaGTGCAAAAATCTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: ESSVYLTLPLILIRVWSQFCQKG*CKNLSS
Trigger: AGAGCTAAGATTTTTGCATCAGCCCTTCTGGCAGAA...CTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR TCA 90 bp ACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCCTACATCTGGCAACTaGCAGTGTCTTAAATACAAT +
Preference number: 4 (lower is better)
Translates to: TGRHRSFLKSCGSFVQCVPTSGN*QCLKYN
Trigger: ATTGTATTTAAGACACTGTCAGTTGCCAGATGTAGG...GACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR GCA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGGTTACCCCTCTTCTGTaGGAAGAGCAGCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: QHILFAKTQLRDSVELAGVTPLL*EEQQQA
Trigger: TGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGTAAC...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR GCA 90 bp AAGCTGCCCACAAATAGCCTAAAGCTTATCTGTCACCAATCAAGGGCTCTTCACAGGAAGAGAACCAGGTaGTTCACGTTACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KLPTNSLKLICHQSRALHRKRTR*FTLPLF
Trigger: GAAGAGGGGTAACGTGAAGCACCTGGTTCTCTTCCT...GTGAAGAGCCCTTGATTGGTGACAGATAAGCTTTAGGCTATTTGTGGGCAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR GCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGCCGAAGAGGCCCAGTTaGAGGTTGCGCAGCCACACG +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELPKRPS*RLRSHT
Trigger: CGTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGG...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GGTCAGAAAGCTACACGTGGACTAAATAAATACAACATCTTTATTTGGCATTGGACCAGCCCCAACCGCTaGCATGTTGGCATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: GQKATRGLNKYNIFIWHWTSPNR*HVGICP
Trigger: CGGGCAGATGCCAACATGGCAGCGGTTGGGGCTGGT...CCAATGCCAAATAAAGATGTTGTATTTATTTAGTCCACGTGTAGCTTTCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376521.6
CDS-3UTR CCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGAAAGAAGCGGTCCCCTaGCAACGTGCGGGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELKEAVP*QRAGVA
Trigger: CGCTACGCCCGCACGTTGCCAGGGGACCGCTTCTTT...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGAGATGGCAACATACTaGAGGTTATTCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: VQCLPHSTPNTDQSLVPAEMATY*RLFCKV
Trigger: CACCTTGCAGAATAACCTCCAGTATGTTGCCATCTC...AGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGCCGGCTTGCTGTGCCTaGACAATGGCGACGCCAGTG +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELPACCA*TMATPV
Trigger: CACTGGCGTCGCCATTGTCCAGGCACAGCAAGCCGG...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGGAGTTTGGTCCCAGCTaGGCCAAGGGCAAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: QHILFAKTQLRDSVELAGEFGPS*AKGKKR
Trigger: TCTCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTC...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR CCA 90 bp AGCTTATCTGTCACCAATCAAGGGCTCTTCACAGGTATTATTTCTTTTAAGTATCAACCGCTGCCATGTTaGCATCTGCCCGGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: SLSVTNQGLFTGIISFKYQPLPC*HLPGPS
Trigger: GGACGGGCCGGGCAGATGCCAACATGGCAGCGGTTG...ATACTTAAAAGAAATAATACCTGTGAAGAGCCCTTGATTGGTGACAGATAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000634461.1
CDS-3UTR CCA 90 bp TCAAAAATAAAGATCCAATGGCTCTATTTACATATAGCAAAGACAGCCCAGGCAAGGTGGAGGGACTGCTaGGAGGGACTCTCCCAGACG +
Preference number: 4 (lower is better)
Translates to: SKIKIQWLYLHIAKTAQARWRDC*EGLSQT
Trigger: CGTCTGGGAGAGTCCCTCCCAGCAGTCCCTCCACCT...TGCCTGGGCTGTCTTTGCTATATGTAAATAGAGCCATTGGATCTTTATTTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR CCA 90 bp CCAATGGCTCTATTTACATATAGCAAAGACAGCCCAGGCATCTTCCATGCACACAGGTATCAAGGAAGCTaGCCCAAGGCCACACAAAAG +
Preference number: 4 (lower is better)
Translates to: PMALFTYSKDSPGIFHAHRYQGS*PKATQK
Trigger: CTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCT...GTGTGCATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAATAGAGCCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR TCA 90 bp TCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTCCTACATCTGGCAACTaGCAGTGTCTTAAATACAAT +
Preference number: 4 (lower is better)
Translates to: SVIPEELREFCPVCPYGGPTSGN*QCLKYN
Trigger: ATTGTATTTAAGACACTGTCAGTTGCCAGATGTAGG...ACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR TCA 90 bp GCCCAAGGCCACACAAAAGACGGAACTAGTAACATGATCCAGAGCGGTGGTAAGCCTACATCTGGCAACTaGCAGTGTCTTAAATACAAT +
Preference number: 4 (lower is better)
Translates to: AQGHTKDGTSNMIQSGGKPTSGN*QCLKYN
Trigger: ATTGTATTTAAGACACTGTCAGTTGCCAGATGTAGG...CTTACCACCGCTCTGGATCATGTTACTAGTTCCGTCTTTTGTGTGGCCTTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR TCA 90 bp GGGTTAATAAGCTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCATCAATCCCTGGCATTGGATATCCTaGCATTTGTTCATTACAGTT +
Preference number: 4 (lower is better)
Translates to: GLISFGERRRQVPQFINPWHWIS*HLFITV
Trigger: AACTGTAATGAACAAATGTCAGGATATCCAATGCCA...GGGATTGATGAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAGCTTATTAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR TCA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGAACCCTTCACCTTGGTaGGCAACCTGGAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: QHILFAKTQLRDSVELAGNPSPW*ATWKVA
Trigger: TGCCACTTTCCAGGTTGCTCACCAAGGTGAAGGGTT...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635460.1
CDS-3UTR GCA 90 bp ATCTCAGTGAACAGGCATTACTATTTCCACCCCCAATTTTCACAGACGAGAAAAAGCGTGTCCACATACTaGACCAGGACAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: ISVNRHYYFHPQFSQTRKSVSTY*TRTASW
Trigger: CCATGAGGCTGTCCTGGTGCAGTATGTGGACACGCT...TTTTCTCGTCTGTGAAAATTGGGGGTGGAAATAGTAATGCCTGTTCACTGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR GCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGGCTATGGCTTTGGCTaGACCTCGGGGAAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELGYGFG*TSGKAG
Trigger: TCCAGCCTTCCCCGAGGTGCAGCCAAAGCCATAGCC...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376529.8
CDS-3UTR GCA 90 bp AGCTTATCTGTCACCAATCAAGGGCTCTTCACAGGTATTATTTCTTTTAAGTATACCAGCCCCAACCGCTaGCATGTTGGCATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SLSVTNQGLFTGIISFKYTSPNR*HVGICP
Trigger: CGGGCAGATGCCAACATGGCAGCGGTTGGGGCTGGT...ATACTTAAAAGAAATAATACCTGTGAAGAGCCCTTGATTGGTGACAGATAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000634461.1
CDS-3UTR CCA 90 bp CTCTTTAACCATTTCACAAAGCTGCCCACAAATAGCCTAAAGCTTATCTGTCACATGAGGGAGGCATTCTaGACCACCAGCACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: LFNHFTKLPTNSLKLICHMREAF*TTSTAR
Trigger: CCTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCAT...GTGACAGATAAGCTTTAGGCTATTTGTGGGCAGCTTTGTGAAATGGTTAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR CCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGCAGAGGCTATGGCTTTaGCTGCACCTCGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELQRLWL*LHLGEG
Trigger: GCCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTG...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGCAGAGGCAGAGGCTATaGCTTTGGCTGCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELQRQRL*LWLHLG
Trigger: CCCGAGGTGCAGCCAAAGCCATAGCCTCTGCCTCTG...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGATACTGATCAGAGTTTaGTCCCAGCTGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: QHILFAKTQLRDSVELAGILIRV*SQLGQG
Trigger: CCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTAT...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TATCTGTCACCAATCAAGGGCTCTTCACAGGTATTATTTCTTTTAAGTATCCTATCACGTTACCCGCACTaGCGGTCCCCGGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: YLSPIKGSSQVLFLLSILSRYPH*RSPAPM
Trigger: CATTGGAGCCGGGGACCGCCAGTGCGGGTAACGTGA...TAGGATACTTAAAAGAAATAATACCTGTGAAGAGCCCTTGATTGGTGACAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634461.1
CDS-3UTR TCA 90 bp GCTTATCTGTCACCAATCAAGGGCTCTTCACAGGTATTATTTCTTTTAAGTATCAGGGCACTGCGAGCTTaGGCGTGTCCACATACTGCA +
Preference number: 4 (lower is better)
Translates to: AYLSPIKGSSQVLFLLSIRALRA*ACPHTA
Trigger: TGCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCT...GATACTTAAAAGAAATAATACCTGTGAAGAGCCCTTGATTGGTGACAGATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR TCA 90 bp CCAATGGCTCTATTTACATATAGCAAAGACAGCCCAGGCATCTTCCATGCACACTTCTGCCAGAAGGGCTaGTGCAAAAATCTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: PMALFTYSKDSPGIFHAHFCQKG*CKNLSS
Trigger: AGAGCTAAGATTTTTGCATCAGCCCTTCTGGCAGAA...GTGTGCATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAATAGAGCCATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR GCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELDERGH*ELERVH
Trigger: GTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATC...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR GCA 90 bp CCAAAAATAAGCCTACATCTGGCAACTGACAGTGTCTTAAATACAATGAGATTCGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PKISLHLATDSVLNTMRFDERGH*ELERVH
Trigger: GTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATC...GAATCTCATTGTATTTAAGACACTGTCAGTTGCCAGATGTAGGCTTATTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR GCA 90 bp ATCTCAGTGAACAGGCATTACTATTTCCACCCCCAATTTTCACAGACGAGAAAAAGGAAGAGAACCAGGTaGTTCACGTTACCCGCACTG +
Preference number: 4 (lower is better)
Translates to: ISVNRHYYFHPQFSQTRKRKRTR*FTLPAL
Trigger: CAGTGCGGGTAACGTGAAGCACCTGGTTCTCTTCCT...TTTTCTCGTCTGTGAAAATTGGGGGTGGAAATAGTAATGCCTGTTCACTGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000634461.1
CDS-3UTR CCA 90 bp TCAAAAATAAAGATCCAATGGCTCTATTTACATATAGCAAAGACAGCCCAGGCAATGAGGTCTCCACGGTaGGAAGACAGCTGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: SKIKIQWLYLHIAKTAQAMRSPR*EDSCGG
Trigger: ACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCAT...TGCCTGGGCTGTCTTTGCTATATGTAAATAGAGCCATTGGATCTTTATTTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR CCA 90 bp TATCTGTCACCAATCAAGGGCTCTTCACAGGTATTATTTCTTTTAAGTATCCTAGGCTTGGGGCTCACCTaGAAAGTGGCAGCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: YLSPIKGSSQVLFLLSILGLGLT*KVAAGR
Trigger: CCTACCAGCTGCCACTTTCCAGGTGAGCCCCAAGCC...TAGGATACTTAAAAGAAATAATACCTGTGAAGAGCCCTTGATTGGTGACAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR TCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGTCTGCAAGGTGTAGATaGGAGAGGGCACTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELSARCR*ERALRA
Trigger: AGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGA...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR TCA 90 bp TATCCTAGCATCTCAGTGAACAGGCATTACTATTTCCACCCCCAATTTTCACAGCTCACAACACCATTCTaGAGTGAGCACCACTGTAAG +
Preference number: 4 (lower is better)
Translates to: YPSISVNRHYYFHPQFSQLTTPF*SEHHCK
Trigger: CTTACAGTGGTGCTCACTTCAGAATGGTGTTGTGAG...CTGTGAAAATTGGGGGTGGAAATAGTAATGCCTGTTCACTGAGATGCTAGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635015.1
CDS-3UTR GCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGTTACCCCTCTTCTGTaGGAAGAGCAGCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELVTPLL*EEQQQA
Trigger: TGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGTAAC...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR GCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGAGCGTGTCCACATACTaGACCAGGACAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELSVSTY*TRTASW
Trigger: CCATGAGGCTGTCCTGGTGCAGTATGTGGACACGCT...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR GCA 90 bp TATCTGTCACCAATCAAGGGCTCTTCACAGGTATTATTTCTTTTAAGTATCCTAGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: YLSPIKGSSQVLFLLSILDERGH*ELERVH
Trigger: GTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATC...TAGGATACTTAAAAGAAATAATACCTGTGAAGAGCCCTTGATTGGTGACAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR CCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGATGAGGGAGGCATTCTaGACCACCAGCACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELMREAF*TTSTAR
Trigger: CCTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCAT...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR CCA 90 bp TCAGCCACTTCAAGGACCTCCATTTTTCCCACACCCTGGATCATTAATGATATGGAGATGGCAACATACTaGAGGTTATTCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: SATSRTSIFPTPWIINDMEMATY*RLFCKV
Trigger: CACCTTGCAGAATAACCTCCAGTATGTTGCCATCTC...CATATCATTAATGATCCAGGGTGTGGGAAAAATGGAGGTCCTTGAAGTGGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR CCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGAGTTTGGTCCCAGCTaGGCCAAGGGCAAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELEFGPS*AKGKKR
Trigger: TCTCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTC...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGTCAGAAAGCTACACGTGGACTAAATAAATACAACATCTTTATTTGGCATTGGGGGGCTGAGCTGAGGTaGGTCATGAGAGAGCTTAGT +
Preference number: 4 (lower is better)
Translates to: GQKATRGLNKYNIFIWHWGAELR*VMRELS
Trigger: ACTAAGCTCTCTCATGACCCACCTCAGCTCAGCCCC...CCAATGCCAAATAAAGATGTTGTATTTATTTAGTCCACGTGTAGCTTTCTGACC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR CCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGGGGCTGAGCTGAGGTaGGTCATGAGAGAGCTTAGT +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELGAELR*VMRELS
Trigger: ACTAAGCTCTCTCATGACCCACCTCAGCTCAGCCCC...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR TCA 90 bp CCAATGGCTCTATTTACATATAGCAAAGACAGCCCAGGCATCTTCCATGCACACCCTACATCTGGCAACTaGCAGTGTCTTAAATACAAT +
Preference number: 4 (lower is better)
Translates to: PMALFTYSKDSPGIFHAHPTSGN*QCLKYN
Trigger: ATTGTATTTAAGACACTGTCAGTTGCCAGATGTAGG...GTGTGCATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAATAGAGCCATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR GCA 90 bp TTATCTGTCACCAATCAAGGGCTCTTCACAGGTATTATTTCTTTTAAGTATCCTAGCGTGTCCACATACTaGACCAGGACAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: LSVTNQGLFTGIISFKYPSVSTY*TRTASW
Trigger: CCATGAGGCTGTCCTGGTGCAGTATGTGGACACGCT...AGGATACTTAAAAGAAATAATACCTGTGAAGAGCCCTTGATTGGTGACAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR CCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGAGCCAAAGAGGCGAATaGAGGCAACAGTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELSQRGE*RQQWTA
Trigger: TGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCT...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GGTCAGAAAGCTACACGTGGACTAAATAAATACAACATCTTTATTTGGCATTGGAGCCAAAGAGGCGAATaGAGGCAACAGTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: GQKATRGLNKYNIFIWHWSQRGE*RQQWTA
Trigger: TGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCT...CCAATGCCAAATAAAGATGTTGTATTTATTTAGTCCACGTGTAGCTTTCTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR CCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGATACTGATCAGAGTTTaGTCCCAGCTGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELILIRV*SQLGQG
Trigger: CCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTAT...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR TCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGAACCCTTCACCTTGGTaGGCAACTTTGGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELNPSPW*ATLAER
Trigger: CCTTTCTGCCAAAGTTGCTCACCAAGGTGAAGGGTT...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247138.11
ENST00000376529.8
CDS-3UTR TCA 90 bp CCAAAAATAAGCCTACATCTGGCAACTGACAGTGTCTTAAATACAATGAGATTCACGGAACTAGTAACATaGTCCAGAGCGGTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: PKISLHLATDSVLNTMRFTELVT*SRAVVR
Trigger: CCTTACCACCGCTCTGGATCATGTTACTAGTTCCGT...GAATCTCATTGTATTTAAGACACTGTCAGTTGCCAGATGTAGGCTTATTTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR TCA 90 bp GCTCTATTTACATATAGCAAAGACAGCCCAGGCATCTTCCATGCACACACACACTGGCATTGGATATCCTaGCATTTGTTCATTACAGTT +
Preference number: 4 (lower is better)
Translates to: ALFTYSKDSPGIFHAHTHWHWIS*HLFITV
Trigger: AACTGTAATGAACAAATGTCAGGATATCCAATGCCA...GTGTGTGTGTGCATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAATAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR TCA 90 bp AAGCTGCCCACAAATAGCCTAAAGCTTATCTGTCACCAATCAAGGGCTCTTCACTCTAGGCACTGCACGTaGATTCATTCATTTAATTCT +
Preference number: 4 (lower is better)
Translates to: KLPTNSLKLICHQSRALHSRHCT*IHSFNS
Trigger: AGAATTAAATGAATGAATTCACGTGCAGTGCCTAGA...GTGAAGAGCCCTTGATTGGTGACAGATAAGCTTTAGGCTATTTGTGGGCAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635015.1
CDS-3UTR GCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGAGGAAGAGAACCAGGTaGTTCACGTTACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELRKRTR*FTLPLF
Trigger: GAAGAGGGGTAACGTGAAGCACCTGGTTCTCTTCCT...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGCTTGGTGAGCAACTTTaGCAGAAAGGGCTCCGTGAT +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELLGEQL*QKGLRD
Trigger: ATCACGGAGCCCTTTCTGCCAAAGTTGCTCACCAAG...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247138.11
ENST00000376529.8
CDS-3UTR CCA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGAGATGGCAACATACTaGAGGTTATTCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: DTQHILFAKTQLRDSVELEMATY*RLFCKV
Trigger: CACCTTGCAGAATAACCTCCAGTATGTTGCCATCTC...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR CCA 90 bp GCTTATCTGTCACCAATCAAGGGCTCTTCACAGGTATTATTTCTTTTAAGTATCGAGATGGCAACATACTaGAGGTTATTCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: AYLSPIKGSSQVLFLLSIEMATY*RLFCKV
Trigger: CACCTTGCAGAATAACCTCCAGTATGTTGCCATCTC...GATACTTAAAAGAAATAATACCTGTGAAGAGCCCTTGATTGGTGACAGATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR CCA 90 bp AGCTTATCTGTCACCAATCAAGGGCTCTTCACAGGTATTATTTCTTTTAAGTATGAGATGGCAACATACTaGAGGTTATTCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: SLSVTNQGLFTGIISFKYEMATY*RLFCKV
Trigger: CACCTTGCAGAATAACCTCCAGTATGTTGCCATCTC...ATACTTAAAAGAAATAATACCTGTGAAGAGCCCTTGATTGGTGACAGATAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR TCA 90 bp TCAAAAATAAAGATCCAATGGCTCTATTTACATATAGCAAAGACAGCCCAGGCATGGCATTGGATATCCTaGCATTTGTTCATTACAGTT +
Preference number: 4 (lower is better)
Translates to: SKIKIQWLYLHIAKTAQAWHWIS*HLFITV
Trigger: AACTGTAATGAACAAATGTCAGGATATCCAATGCCA...TGCCTGGGCTGTCTTTGCTATATGTAAATAGAGCCATTGGATCTTTATTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS GCA 90 bp GCTCGGGCAGACTGTCTCACCCGCACTGGCGGTCCCCGGCTCCAATaGACCCGCGGAAACCGCCCCTGGCCCGGGCGCCGCGGTGGAACC +
Preference number: 5 (lower is better)
Translates to: ARADCLTRTGGPRLQ*TRGNRPWPGRRGGT
Trigger: GGTTCCACCGCGGCGCCCGGGCCAGGGGCGGTTTCCGCGGGTGCATTGGAGCCGGGGACCGCCAGTGCGGGTGAGACAGTCTGCCCGAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616181.5
ENST00000635015.1
ENST00000635628.1
CDS GCA 90 bp GTACTTCAGGCGCCTGTGAGCCGCACTGGCGGTCCCCGGCTCCAATaGACCCGCGGAAACCGCCCCTGGCCCGGGCGCCGCGGTGGAACC +
Preference number: 5 (lower is better)
Translates to: VLQAPVSRTGGPRLQ*TRGNRPWPGRRGGT
Trigger: GGTTCCACCGCGGCGCCCGGGCCAGGGGCGGTTTCCGCGGGTGCATTGGAGCCGGGGACCGCCAGTGCGGCTCACAGGCGCCTGAAGTAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000247138.11
ENST00000376512.2
ENST00000376521.6
ENST00000376529.8
ENST00000445167.7
ENST00000634665.1
ENST00000635238.1
ENST00000635285.1
ENST00000635460.1
CDS CCA 90 bp GCTCCAATGCACCCGCGGAAACCGCCCCTGGCCCGGGCGCCGCGGTaGAACCACCAGCCCCAACCGCTGCCATGTTGGCATCTGCCCGGC +
Preference number: 5 (lower is better)
Translates to: APMHPRKPPLARAPR*NHQPQPLPCWHLPG
Trigger: GCCGGGCAGATGCCAACATGGCAGCGGTTGGGGCTGGTGGTTCCACCGCGGCGCCCGGGCCAGGGGCGGTTTCCGCGGGTGCATTGGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376512.2
ENST00000376521.6
ENST00000445167.7
ENST00000634461.1
CDS GCA 90 bp CTCCCAAGTGAGAAGCAACTCCGCACTGGCGGTCCCCGGCTCCAATaGACCCGCGGAAACCGCCCCTGGCCCGGGCGCCGCGGTGGAACC +
Preference number: 5 (lower is better)
Translates to: LPSEKQLRTGGPRLQ*TRGNRPWPGRRGGT
Trigger: GGTTCCACCGCGGCGCCCGGGCCAGGGGCGGTTTCCGCGGGTGCATTGGAGCCGGGGACCGCCAGTGCGGAGTTGCTTCTCACTTGGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452555.7
CDS GCA 90 bp AACCAGGTGCTTCACGTTACCCGCACTGGCGGTCCCCGGCTCCAATaGACCCGCGGAAACCGCCCCTGGCCCGGGCGCCGCGGTGGAACC +
Preference number: 5 (lower is better)
Translates to: NQVLHVTRTGGPRLQ*TRGNRPWPGRRGGT
Trigger: GGTTCCACCGCGGCGCCCGGGCCAGGGGCGGTTTCCGCGGGTGCATTGGAGCCGGGGACCGCCAGTGCGGGTAACGTGAAGCACCTGGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634461.1
ENST00000635589.1
CDS CCA 90 bp CTCCGCCTCCCATGCGACTGCTCGGGCAGACTGTCTCACCCGCACTaGCGGTCCCCGGCTCCAATGCACCCGCGGAAACCGCCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: LRLPCDCSGRLSHPH*RSPAPMHPRKPPLA
Trigger: GGCCAGGGGCGGTTTCCGCGGGTGCATTGGAGCCGGGGACCGCCAGTGCGGGTGAGACAGTCTGCCCGAGCAGTCGCATGGGAGGCGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616181.5
ENST00000635015.1
ENST00000635628.1
CDS GCA 90 bp ACATTCCCGACTCCCAGCGATCCCGACCTCCGCCTCCCATGCGACTaGTCGGGCAGACTGTCTCACCCGCACTGGCGGTCCCCGGCTCCA +
Preference number: 5 (lower is better)
Translates to: TFPTPSDPDLRLPCD*SGRLSHPHWRSPAP
Trigger: TGGAGCCGGGGACCGCCAGTGCGGGTGAGACAGTCTGCCCGAGCAGTCGCATGGGAGGCGGAGGTCGGGATCGCTGGGAGTCGGGAATGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR CAA 90 bp GGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGCCAACCGCTGCCATGTaGGCATCTGCCCGGCCCGTC +
Preference number: 5 (lower is better)
Translates to: GRDSPRRETSRRGHRVGEPTAAM*ASARPV
Trigger: GACGGGCCGGGCAGATGCCAACATGGCAGCGGTTGG...CTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000445167.7
CDS-3UTR CAA 90 bp CTGGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGCCCAGTTGCAGGTaGCGCAGCCACACGGAGCCT +
Preference number: 5 (lower is better)
Translates to: LGGTLPDEKPPEEGTGSGRPSCR*RSHTEP
Trigger: AGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCCT...CCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CCTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCCCGGAGGGTGGCGACTaGGGTCCTGCAGATGCCCAA +
Preference number: 5 (lower is better)
Translates to: PPGEGGHPTRKGSRDTQLPEGGD*GPADAQ
Trigger: TTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCGG...GAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS CCA 90 bp GTGAGCAACTTTGGCAGAAAGGGCTCCGTGATGAGGTCTCCACGGTaGGAAGACAGCTGCGGTGGTGGTGGCTGCCCGGGAGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: VSNFGRKGSVMRSPR*EDSCGGGGCPGGCW
Trigger: CCAGCAGCCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCATCACGGAGCCCTTTCTGCCAAAGTTGCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247138.11
ENST00000376529.8
CDS-3UTR CAA 90 bp CTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTGCCGAAGAGGCCCAGTaGCAGGTTGCGCAGCCACAC +
Preference number: 5 (lower is better)
Translates to: LQGKGVTLPGRVHVTPSSAEEAQ*QVAQPH
Trigger: GTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGGC...AGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp GTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCCGCCGAAGGCCTGGTaGAGCACCACGCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: VTLPGRVHVTPSSSPTPLPPKAW*STTPQT
Trigger: TGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGG...GAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp GCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGCCGCCGAAGGCCTGGTaGAGCACCACGCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: ASKEVRGSRGGSSKTPSRPPKAW*STTPQT
Trigger: TGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGG...CCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CCTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCGCAGAGGCTATGGCTTaGGCTGCACCTCGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: PPGEGGHPTRKGSRDTQLAEAMA*AAPRGR
Trigger: CCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTGC...GAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTGCCTCCCCCACCGGCTaGCTGTGCCTGGACAATGGC +
Preference number: 5 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAAASPTG*LCLDNG
Trigger: GCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGGC...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGGCCTCCCCCACCGGCTaGCTGTGCCTGGACAATGGC +
Preference number: 5 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKASPTG*LCLDNG
Trigger: GCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGGC...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCGCCTCCCCCACCGGCTaGCTGTGCCTGGACAATGGC +
Preference number: 5 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTASPTG*LCLDNG
Trigger: GCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGGC...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp GCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGAGGCCCAGTTGCAGGTaGCGCAGCCACACGGAGCCT +
Preference number: 5 (lower is better)
Translates to: ASKEVRGSRGGSSKTPSRRPSCR*RSHTEP
Trigger: AGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCCT...CCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGGCCGAAGAGGCCCAGTaGCAGGTTGCGCAGCCACAC +
Preference number: 5 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGAEEAQ*QVAQPH
Trigger: GTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGGC...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp GCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGCCGAAGAGGCCCAGTaGCAGGTTGCGCAGCCACAC +
Preference number: 5 (lower is better)
Translates to: ASKEVRGSRGGSSKTPSRAEEAQ*QVAQPH
Trigger: GTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGGC...CCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCGCCGAAGGCCTGGTaGAGCACCACGCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: PTLPPKRLEGAEAAALKPPPKAW*STTPQT
Trigger: TGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGG...GGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp AAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCGCCGAAGGCCTGGTaGAGCACCACGCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: KGVTLPGRVHVTPSSSPTPPKAW*STTPQT
Trigger: TGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGG...TGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp AGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGGAGCAGAGGCTATGGCTTaGGCTGCACCTCGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: RDSPRRETSRRGHRVGEGAEAMA*AAPRGR
Trigger: CCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTGC...TCCCTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS TCA 90 bp CAGAAAAACCACTTCCGCGTTCGTCACTTCCGCTGCCGGGCCACCTaGGTGAAGGTGGAGCGAGAGCCGGGATCGTCAGGGTGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: QKNHFRVRHFRCRAT*VKVEREPGSSGWWL
Trigger: AAGCCACCACCCTGACGATCCCGGCTCTCGCTCCACCTTCACTCAGGTGGCCCGGCAGCGGAAGTGACGAACGCGGAAGTGGTTTTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376521.6
CDS-3UTR CAA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTAGGCCCAGTTGCAGGTaGCGCAGCCACACGGAGCCT +
Preference number: 5 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAARPSCR*RSHTEP
Trigger: AGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCCT...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp ATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAGCCGAAGAGGCCCAGTaGCAGGTTGCGCAGCCACAC +
Preference number: 5 (lower is better)
Translates to: IPPTLPPKRLEGAEAAALAEEAQ*QVAQPH
Trigger: GTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGGC...TAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCCGCCGAAGGCCTGGTaGAGCACCACGCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: LGQGQEERTRPGQCLQSQPPKAW*STTPQT
Trigger: TGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGG...CTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp AAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCGGAGGGTGGCGACTaGGGTCCTGCAGATGCCCAA +
Preference number: 5 (lower is better)
Translates to: KGVTLPGRVHVTPSSSPTPEGGD*GPADAQ
Trigger: TTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCGG...TGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCGGAGGGTGGCGACTaGGGTCCTGCAGATGCCCAA +
Preference number: 5 (lower is better)
Translates to: PPTLPPKRLEGAEAAALKPEGGD*GPADAQ
Trigger: TTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCGG...TTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS TCA 90 bp AAAACCACTTCCGCGTTCGTCACTTCCGCTGCCGGGCCACCTGAGTaGAGGTGGAGCGAGAGCCGGGATCGTCAGGGTGGTGGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: KTTSAFVTSAAGPPE*RWSESRDRQGGGFS
Trigger: AGAAAAGCCACCACCCTGACGATCCCGGCTCTCGCTCCACCTTCACTCAGGTGGCCCGGCAGCGGAAGTGACGAACGCGGAAGTGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376521.6
CDS-3UTR CAA 90 bp GCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGAGGGCACTGCGAGCTaGAGCGTGTCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: ASKEVRGSRGGSSKTPSREGTAS*SVSTYC
Trigger: GCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTC...CCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp GGTGAGGCTGGTAGTCCTGGGGTTAGTAATGGTGCCCACCTGGTCAGAAAGCTAGCCTCCCCCACCGGCTaGCTGTGCCTGGACAATGGC +
Preference number: 5 (lower is better)
Translates to: GEAGSPGVSNGAHLVRKLASPTG*LCLDNG
Trigger: GCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGGC...TAGCTTTCTGACCAGGTGGGCACCATTACTAACCCCAGGACTACCAGCCTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR CAA 90 bp CCCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATAGGCCCAGTTGCAGGTaGCGCAGCCACACGGAGCCT +
Preference number: 5 (lower is better)
Translates to: PSWAKGKKRERGQANVFNRPSCR*RSHTEP
Trigger: AGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCCT...ATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp AAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACAGCAGAGGCTATGGCTTaGGCTGCACCTCGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: KGVTLPGRVHVTPSSSPTAEAMA*AAPRGR
Trigger: CCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTGC...TGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp AACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCGCAGAGGCTATGGCTTaGGCTGCACCTCGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: NPASKEVRGSRGGSSKTPAEAMA*AAPRGR
Trigger: CCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTGC...GGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGGCAGAGGCTATGGCTTaGGCTGCACCTCGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKAEAMA*AAPRGR
Trigger: CCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTGC...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTGCAGAGGCTATGGCTTaGGCTGCACCTCGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAAAEAMA*AAPRGR
Trigger: CCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTGC...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CCCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCGGAGGGTGGCGACTaGGGTCCTGCAGATGCCCAA +
Preference number: 5 (lower is better)
Translates to: PSWAKGKKRERGQANVFNPEGGD*GPADAQ
Trigger: TTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCGG...ATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp AGGCTGCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTCAGCCCGGAGGGTGGCGACTaGGGTCCTGCAGATGCCCAA +
Preference number: 5 (lower is better)
Translates to: RLRFSMSTENSAVVRIFSPEGGD*GPADAQ
Trigger: TTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCGG...GCTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR CAA 90 bp AAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACAGAGGGCACTGCGAGCTaGAGCGTGTCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: KGVTLPGRVHVTPSSSPTEGTAS*SVSTYC
Trigger: GCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTC...TGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCGAGGGCACTGCGAGCTaGAGCGTGTCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTEGTAS*SVSTYC
Trigger: GCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTC...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp AACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCGAGGGCACTGCGAGCTaGAGCGTGTCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: NPASKEVRGSRGGSSKTPEGTAS*SVSTYC
Trigger: GCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTC...GGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp GCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGGGAGGAGGGCACTGCGAGCTaGAGCGTGTCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: AAGVLSSVSLWRWRDCWEEGTAS*SVSTYC
Trigger: GCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTC...CTCCCAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp GCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACGGAACGCCTCCCCCACCGGCTaGCTGTGCCTGGACAATGGC +
Preference number: 5 (lower is better)
Translates to: AHLQGIKEAGPRPHKRRNASPTG*LCLDNG
Trigger: GCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGGC...GTTCCGTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp AAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGACTGCTGAGGCCCAGTTGCAGGTaGCGCAGCCACACGGAGCCT +
Preference number: 5 (lower is better)
Translates to: KSCGSFVQCVLMEVEGLLRPSCR*RSHTEP
Trigger: AGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCCT...CAGCAGTCCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CCTCCAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCGAGGTGGCAAAGCCCTaGAGGATATTGTCAGCGTAC +
Preference number: 5 (lower is better)
Translates to: PPGEGGHPTRKGSRDTQLEVAKP*RILSAY
Trigger: GTACGCTGACAATATCCTCAAGGGCTTTGCCACCTC...GAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp TATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGGCAGAGGCTATGGCTTaGGCTGCACCTCGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: YGQLNPTGRHRSFLKSCGAEAMA*AAPRGR
Trigger: CCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTGC...CCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp ATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGCCAACCGCTGCCATGTaGGCATCTGCCCGGCCCGTC +
Preference number: 5 (lower is better)
Translates to: IPEELREFCPVCPYGGGGPTAAM*ASARPV
Trigger: GACGGGCCGGGCAGATGCCAACATGGCAGCGGTTGG...CCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000445167.7
CDS-3UTR CAA 90 bp GTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGCCTCCCCCACCGGCTaGCTGTGCCTGGACAATGGC +
Preference number: 5 (lower is better)
Translates to: VYLTLPLILIRVWSQLGQASPTG*LCLDNG
Trigger: GCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGGC...TTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp AGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACGGCCTCCCCCACCGGCTaGCTGTGCCTGGACAATGGC +
Preference number: 5 (lower is better)
Translates to: RSPSSRYQGSWPKATQKTASPTG*LCLDNG
Trigger: GCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGGC...CGTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp ATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGAGGCCCAGTTGCAGGTaGCGCAGCCACACGGAGCCT +
Preference number: 5 (lower is better)
Translates to: IPEELREFCPVCPYGGGGRPSCR*RSHTEP
Trigger: AGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCCT...CCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCGCCGAAGGCCTGGTaGAGCACCACGCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: QCLPHSTPNTDQSLVPAGPPKAW*STTPQT
Trigger: TGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGG...CCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp AGGTTGAAGGAGTTCCAAGGACATTCTGAAGGTGACATAGCCCCTGTCCTCTGCCCAACCGCTGCCATGTaGGCATCTGCCCGGCCCGTC +
Preference number: 5 (lower is better)
Translates to: RLKEFQGHSEGDIAPVLCPTAAM*ASARPV
Trigger: GACGGGCCGGGCAGATGCCAACATGGCAGCGGTTGG...GCAGAGGACAGGGGCTATGTCACCTTCAGAATGTCCTTGGAACTCCTTCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000634461.1
CDS-3UTR CAA 90 bp AAGGGAGGAGAGAAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCCGGAGGGTGGCGACTaGGGTCCTGCAGATGCCCAA +
Preference number: 5 (lower is better)
Translates to: KGGEKASNYGQLNPTGRHPEGGD*GPADAQ
Trigger: TTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCGG...ATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTCTCTCCTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS GCA 90 bp ACAGAGCTTCATCGGCCCATTCCTGTCACTAGACCCGCCTTATCCTaGCGTTCGTCCGCTTCACTGATCGCGCTTTCCAGATCATCCCCC +
Preference number: 5 (lower is better)
Translates to: TELHRPIPVTRPALS*RSSASLIALSRSSP
Trigger: GGGGGATGATCTGGAAAGCGCGATCAGTGAAGCGGACGAACGGCAGGATAAGGCGGGTCTAGTGACAGGAATGGGCCGATGAAGCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376515.8
ENST00000376521.6
CDS-3UTR CAA 90 bp CTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGAGGCAGGTGAGACCTTaGAGCACTTCCGCCATGACC +
Preference number: 5 (lower is better)
Translates to: LGQGQEERTRPGQCLQSQRQVRP*STSAMT
Trigger: GGTCATGGCGGAAGTGCTCAAAGGTCTCACCTGCCT...CTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp TATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGGCAGGTGAGACCTTaGAGCACTTCCGCCATGACC +
Preference number: 5 (lower is better)
Translates to: YGQLNPTGRHRSFLKSCGRQVRP*STSAMT
Trigger: GGTCATGGCGGAAGTGCTCAAAGGTCTCACCTGCCT...CCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp GGAAAGGCTGCGATTCAGCATGAGCACGGAGAACAGCGCTGTGGTCAGGATCTTGAGGGCACTGCGAGCTaGAGCGTGTCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: GKAAIQHEHGEQRCGQDLEGTAS*SVSTYC
Trigger: GCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTC...AAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634665.1
ENST00000635628.1
CDS-3UTR CAA 90 bp TCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCAAGAAGAGCCGAAGAGGCCCAGTaGCAGGTTGCGCAGCCACAC +
Preference number: 5 (lower is better)
Translates to: STPNTDQSLVPAGPRARRAEEAQ*QVAQPH
Trigger: GTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGGC...TCTTCTTGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp ACAGTTAAGGGGTTAATAAGCTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCGCCGAAGAGGCCCAGTaGCAGGTTGCGCAGCCACAC +
Preference number: 5 (lower is better)
Translates to: TVKGLISFGERRRQVPQFAEEAQ*QVAQPH
Trigger: GTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGGC...GAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAGCTTATTAACCCCTTAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635628.1
CDS-3UTR CAA 90 bp GACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGCCGCCGAAGGCCTGGTaGAGCACCACGCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: DRESSVYLTLPLILIRVWPPKAW*STTPQT
Trigger: TGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGG...CCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp GGGAGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGAAGCCCTTGAGGATATaGTCAGCGTACTTGACAACC +
Preference number: 5 (lower is better)
Translates to: GRDSPRRETSRRGHRVGEKPLRI*SAYLTT
Trigger: GGTTGTCAAGTACGCTGACAATATCCTCAAGGGCTT...CTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGGAGGTGGCAAAGCCCTaGAGGATATTGTCAGCGTAC +
Preference number: 5 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGEVAKP*RILSAY
Trigger: GTACGCTGACAATATCCTCAAGGGCTTTGCCACCTC...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp TCCCTGGGGACTCACAAGAAGCCCATCTTCAAGGTATCAAGGAAGCTGGCCCAAGCAGAGGCTATGGCTTaGGCTGCACCTCGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: SLGTHKKPIFKVSRKLAQAEAMA*AAPRGR
Trigger: CCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTGC...TTGGGCCAGCTTCCTTGATACCTTGAAGATGGGCTTCTTGTGAGTCCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR CAA 90 bp ACAGGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCGCAGAGGCTATGGCTTaGGCTGCACCTCGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: TGRHRSFLKSCGSFVQCVAEAMA*AAPRGR
Trigger: CCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTGC...GACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CAGGGGAAGGGGGTCACCCTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTAGAGCTGCGGGAGTTTaGTCCAGTGTGTCCTTATGG +
Preference number: 5 (lower is better)
Translates to: QGKGVTLPGRVHVTPSSSRAAGV*SSVSLW
Trigger: CCATAAGGACACACTGGACAAAACTCCCGCAGCTCT...ACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAGGGTGACCCCCTTCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS TCA 90 bp TGTGCCGAAGAGGCCCAGTTGCAGGTTGCGCAGCCACACGGAGCCTaGGCTGCCTTTGAGGATCTTCTCAAAGTAGACACCTGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: CAEEAQLQVAQPHGA*AAFEDLLKVDTWKV
Trigger: CACTTTCCAGGTGTCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413561.7
CDS-3UTR CAA 90 bp AGGGACTCTCCCAGACGAGAAACCTCCAGAAGAGGGCACAGGGTCGGGGAGGGAATATTGTCAGCGTACTaGACAACCACAGCCACCAGT +
Preference number: 5 (lower is better)
Translates to: RDSPRRETSRRGHRVGEGILSAY*TTTATS
Trigger: ACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATAT...TCCCTCCCCGACCCTGTGCCCTCTTCTGGAGGTTTCTCGTCTGGGAGAGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGGCAGAGGCTATGGCTTaGGCTGCACCTCGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: QCLPHSTPNTDQSLVPAGAEAMA*AAPRGR
Trigger: CCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTGC...CCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp ACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTAATACTGATCAGAGTTaGGTCCCAGCTGGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: TLPPKRLEGAEAAALKPPNTDQS*VPAGPR
Trigger: CCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATT...AGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGAATACTGATCAGAGTTaGGTCCCAGCTGGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKNTDQS*VPAGPR
Trigger: CCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATT...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CACACAAAAGACGGAACTAGTAACATGATCCAGAGCGGTGGTAAGGGAGGAGAGCCGGAGGGTGGCGACTaGGGTCCTGCAGATGCCCAA +
Preference number: 5 (lower is better)
Translates to: HTKDGTSNMIQSGGKGGEPEGGD*GPADAQ
Trigger: TTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCGG...CTCTCCTCCCTTACCACCGCTCTGGATCATGTTACTAGTTCCGTCTTTTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCAGAGCTGCGGGAGTTTaGTCCAGTGTGTCCTTATGG +
Preference number: 5 (lower is better)
Translates to: PNPASKEVRGSRGGSSKTRAAGV*SSVSLW
Trigger: CCATAAGGACACACTGGACAAAACTCCCGCAGCTCT...GGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp ACAATACCCCCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTAGAGCTGCGGGAGTTTaGTCCAGTGTGTCCTTATGG +
Preference number: 5 (lower is better)
Translates to: TIPPTLPPKRLEGAEAAARAAGV*SSVSLW
Trigger: CCATAAGGACACACTGGACAAAACTCCCGCAGCTCT...AGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGGGGGTATTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp GGTAGGCATCGGTCATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTAGGCAGGTGAGACCTTaGAGCACTTCCGCCATGACC +
Preference number: 5 (lower is better)
Translates to: GRHRSFLKSCGSFVQCVLRQVRP*STSAMT
Trigger: GGTCATGGCGGAAGTGCTCAAAGGTCTCACCTGCCT...AAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAATGACCGATGCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376515.8
ENST00000376521.6
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp TGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAGAGGGCACTGCGAGCTaGAGCGTGTCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: CLPHSTPNTDQSLVPAGPEGTAS*SVSTYC
Trigger: GCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTC...TGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp TCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCATTCCTGAAGAGCGAGGGCACTGCGAGCTaGAGCGTGTCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: SNYGQLNPTGRHRSFLKSEGTAS*SVSTYC
Trigger: GCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTC...GCTCTTCAGGAATGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp AAAGACGGAACTAGTAACATGATCCAGAGCGGTGGTAAGGGAGGAGAGAAGGCCGAGGGCACTGCGAGCTaGAGCGTGTCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: KDGTSNMIQSGGKGGEKAEGTAS*SVSTYC
Trigger: GCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTC...GGCCTTCTCTCCTCCCTTACCACCGCTCTGGATCATGTTACTAGTTCCGTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CCAATGGCTCTATTTACATATAGCAAAGACAGCCCAGGCATCTTCCATGCACACCCGCCGAAGGCCTGGTaGAGCACCACGCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: PMALFTYSKDSPGIFHAHPPKAW*STTPQT
Trigger: TGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGG...GTGTGCATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAATAGAGCCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635628.1
CDS-3UTR CAA 90 bp CCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCTCCAGGGATATTGTCAGCGTACTaGACAACCACAGCCACCAGT +
Preference number: 5 (lower is better)
Translates to: PPKRLEGAEAAALKPPPGILSAY*TTTATS
Trigger: ACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATAT...CCCTGGAGGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp AGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCGAGGTGGCAAAGCCCTaGAGGATATTGTCAGCGTAC +
Preference number: 5 (lower is better)
Translates to: SWAKGKKRERGQANVFNPEVAKP*RILSAY
Trigger: GTACGCTGACAATATCCTCAAGGGCTTTGCCACCTC...GGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS CCA 90 bp ACTGCGAGCTTGAGCGTGTCCACATACTGCACCAGGACAGCCTCATaGAGGAAGAGAACCAGGTGCTTCACGTTACCTTTGAGCACTTCC +
Preference number: 5 (lower is better)
Translates to: TASLSVSTYCTRTAS*RKRTRCFTLPLSTS
Trigger: GGAAGTGCTCAAAGGTAACGTGAAGCACCTGGTTCTCTTCCTCCATGAGGCTGTCCTGGTGCAGTATGTGGACACGCTCAAGCTCGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635238.1
CDS-3UTR CAA 90 bp TCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGAGGGCACTGCGAGCTaGAGCGTGTCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: SSVYLTLPLILIRVWSQLEGTAS*SVSTYC
Trigger: GCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTC...CAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp GCTCTATTTACATATAGCAAAGACAGCCCAGGCATCTTCCATGCACACACACACAGGCCCAGTTGCAGGTaGCGCAGCCACACGGAGCCT +
Preference number: 5 (lower is better)
Translates to: ALFTYSKDSPGIFHAHTHRPSCR*RSHTEP
Trigger: AGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCCT...GTGTGTGTGTGCATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAATAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635628.1
CDS-3UTR CAA 90 bp CTACCAGGAAGGGTTCACGTGACACCCAGCTCTAGTCCCACACCCCTCCAGAAGATATTGTCAGCGTACTaGACAACCACAGCCACCAGT +
Preference number: 5 (lower is better)
Translates to: LPGRVHVTPSSSPTPLQKILSAY*TTTATS
Trigger: ACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATAT...CTTCTGGAGGGGTGTGGGACTAGAGCTGGGTGTCACGTGAACCCTTCCTGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp AACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCCCAAGCCCTTGAGGATATaGTCAGCGTACTTGACAACC +
Preference number: 5 (lower is better)
Translates to: NPASKEVRGSRGGSSKTPKPLRI*SAYLTT
Trigger: GGTTGTCAAGTACGCTGACAATATCCTCAAGGGCTT...GGGGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CCAACCCTGCCTCCAAAGAGGTTAGAGGGAGCAGAGGCGGCAGCTCTAAAACCCAAGCCCTTGAGGATATaGTCAGCGTACTTGACAACC +
Preference number: 5 (lower is better)
Translates to: PTLPPKRLEGAEAAALKPKPLRI*SAYLTT
Trigger: GGTTGTCAAGTACGCTGACAATATCCTCAAGGGCTT...GGGTTTTAGAGCTGCCGCCTCTGCTCCCTCTAACCTCTTTGGAGGCAGGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000452555.7
ENST00000616181.5
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGGCCAAGGGCAAATACTGATCAGAGTTaGGTCCCAGCTGGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: PHSTPNTDQSLVPAGPRANTDQS*VPAGPR
Trigger: CCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATT...TGCCCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp AGAGAGAACGAGGCCAGGCCAATGTCTTCAATCCCAGCGGCTAGGAACCCTTCAAATACTGATCAGAGTTaGGTCCCAGCTGGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: RENEARPMSSIPAARNPSNTDQS*VPAGPR
Trigger: CCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATT...TGAAGGGTTCCTAGCCGCTGGGATTGAAGACATTGGCCTGGCCTCGTTCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CCAATGGCTCTATTTACATATAGCAAAGACAGCCCAGGCATCTTCCATGCACACCCGGAGGGTGGCGACTaGGGTCCTGCAGATGCCCAA +
Preference number: 5 (lower is better)
Translates to: PMALFTYSKDSPGIFHAHPEGGD*GPADAQ
Trigger: TTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCGG...GTGTGCATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAATAGAGCCATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR CAA 90 bp GGTGAGGCTGGTAGTCCTGGGGTTAGTAATGGTGCCCACCTGGTCAGAAAGCTAAGAGCTGCGGGAGTTTaGTCCAGTGTGTCCTTATGG +
Preference number: 5 (lower is better)
Translates to: GEAGSPGVSNGAHLVRKLRAAGV*SSVSLW
Trigger: CCATAAGGACACACTGGACAAAACTCCCGCAGCTCT...TAGCTTTCTGACCAGGTGGGCACCATTACTAACCCCAGGACTACCAGCCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000635628.1
CDS-3UTR CAA 90 bp GGAGAGAAGGCCTCAAACTATGGGCAACTGAACCCCACAGGTAGGCATCGGTCAAGAGCTGCGGGAGTTTaGTCCAGTGTGTCCTTATGG +
Preference number: 5 (lower is better)
Translates to: GEKASNYGQLNPTGRHRSRAAGV*SSVSLW
Trigger: CCATAAGGACACACTGGACAAAACTCCCGCAGCTCT...TGACCGATGCCTACCTGTGGGGTTCAGTTGCCCATAGTTTGAGGCCTTCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635285.1
ENST00000635628.1
CDS GCA 90 bp AACATACTGGAGGTTATTCTGCAAGGTGTAGATGAGAGAGGGCACTaGGAGCTTGAGCGTGTCCACATACTGCACCAGGACAGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: NILEVILQGVDERGH*ELERVHILHQDSPS
Trigger: AGAGGGGCTGTCCTGGTGCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGAATAACCTCCAGTATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634665.1
CDS-3UTR CAA 90 bp TGGCCCCAGAATCCAGGCTCTTTAACCATTTCACAAAGCTGCCCACAAATAGCCAGGCAGGTGAGACCTTaGAGCACTTCCGCCATGACC +
Preference number: 5 (lower is better)
Translates to: WPQNPGSLTISQSCPQIARQVRP*STSAMT
Trigger: GGTCATGGCGGAAGTGCTCAAAGGTCTCACCTGCCT...GGCTATTTGTGGGCAGCTTTGTGAAATGGTTAAAGAGCCTGGATTCTGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR CAA 90 bp CCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATCATATTGTCAGCGTACTaGACAACCACAGCCACCAGT +
Preference number: 5 (lower is better)
Translates to: PAGPRARRENEARPMSSIILSAY*TTTATS
Trigger: ACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATAT...GATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp AGGTGCTTCACGTTACCCCTCTTCTGTGCGAAGAGCAGCAGCAGGCAGGTGAGAATATTGTCAGCGTACTaGACAACCACAGCCACCAGT +
Preference number: 5 (lower is better)
Translates to: RCFTLPLFCAKSSSRQVRILSAY*TTTATS
Trigger: ACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATAT...TCTCACCTGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGTAACGTGAAGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR CAA 90 bp CCCAGCTGGGCCAAGGGCAAGAAGAGAGAACGAGGCCAGGCCAATGTCTTCAATAAGCCCTTGAGGATATaGTCAGCGTACTTGACAACC +
Preference number: 5 (lower is better)
Translates to: PSWAKGKKRERGQANVFNKPLRI*SAYLTT
Trigger: GGTTGTCAAGTACGCTGACAATATCCTCAAGGGCTT...ATTGAAGACATTGGCCTGGCCTCGTTCTCTCTTCTTGCCCTTGGCCCAGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp ATTCCTGAAGAGCTGCGGGAGTTTTGTCCAGTGTGTCCTTATGGAGGTGGAGGGGAGGTGGCAAAGCCCTaGAGGATATTGTCAGCGTAC +
Preference number: 5 (lower is better)
Translates to: IPEELREFCPVCPYGGGGEVAKP*RILSAY
Trigger: GTACGCTGACAATATCCTCAAGGGCTTTGCCACCTC...CCCTCCACCTCCATAAGGACACACTGGACAAAACTCCCGCAGCTCTTCAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp GACAGCACAATGGACAGGGAGGTGGCAAAGCCCTTGAGGATATTGTCAGCGTACAGAGCTGCGGGAGTTTaGTCCAGTGTGTCCTTATGG +
Preference number: 5 (lower is better)
Translates to: DSTMDREVAKPLRILSAYRAAGV*SSVSLW
Trigger: CCATAAGGACACACTGGACAAAACTCCCGCAGCTCT...GTACGCTGACAATATCCTCAAGGGCTTTGCCACCTCCCTGTCCATTGTGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR CAA 90 bp AAGCTGCCCACAAATAGCCTAAAGCTTATCTGTCACCAATCAAGGGCTCTTCACGAGGGCACTGCGAGCTaGAGCGTGTCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: KLPTNSLKLICHQSRALHEGTAS*SVSTYC
Trigger: GCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTC...GTGAAGAGCCCTTGATTGGTGACAGATAAGCTTTAGGCTATTTGTGGGCAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR CAA 90 bp CCTAGCATCTCAGTGAACAGGCATTACTATTTCCACCCCCAATTTTCACAGACGGAGGGCACTGCGAGCTaGAGCGTGTCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: PSISVNRHYYFHPQFSQTEGTAS*SVSTYC
Trigger: GCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTC...CGTCTGTGAAAATTGGGGGTGGAAATAGTAATGCCTGTTCACTGAGATGCTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR CAA 90 bp GAGGCAACAGTGGACAGCACAATGGACAGGGAGGTGGCAAAGCCCTTGAGGATAAAGCCCTTGAGGATATaGTCAGCGTACTTGACAACC +
Preference number: 5 (lower is better)
Translates to: EATVDSTMDREVAKPLRIKPLRI*SAYLTT
Trigger: GGTTGTCAAGTACGCTGACAATATCCTCAAGGGCTT...TATCCTCAAGGGCTTTGCCACCTCCCTGTCCATTGTGCTGTCCACTGTTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635628.1
CDS-3UTR CAA 90 bp CTCTTTAACCATTTCACAAAGCTGCCCACAAATAGCCTAAAGCTTATCTGTCACCCAACCGCTGCCATGTaGGCATCTGCCCGGCCCGTC +
Preference number: 5 (lower is better)
Translates to: LFNHFTKLPTNSLKLICHPTAAM*ASARPV
Trigger: GACGGGCCGGGCAGATGCCAACATGGCAGCGGTTGG...GTGACAGATAAGCTTTAGGCTATTTGTGGGCAGCTTTGTGAAATGGTTAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376512.2
CDS-3UTR CAA 90 bp TGGTGGGGACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGATATTGTCAGCGTACTaGACAACCACAGCCACCAGT +
Preference number: 5 (lower is better)
Translates to: WWGQGVQCLPHSTPNTDQILSAY*TTTATS
Trigger: ACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATAT...CTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTCCCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp GGGTTAATAAGCTTTGGGGAGCGCAGGAGGCAGGTTCCACAGTTCATCAATCCCATATTGTCAGCGTACTaGACAACCACAGCCACCAGT +
Preference number: 5 (lower is better)
Translates to: GLISFGERRRQVPQFINPILSAY*TTTATS
Trigger: ACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATAT...GGGATTGATGAACTGTGGAACCTGCCTCCTGCGCTCCCCAAAGCTTATTAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635628.1
CDS-3UTR CAA 90 bp TGGTGGGGACAGGGAGTCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAAGCCCTTGAGGATATaGTCAGCGTACTTGACAACC +
Preference number: 5 (lower is better)
Translates to: WWGQGVQCLPHSTPNTDQKPLRI*SAYLTT
Trigger: GGTTGTCAAGTACGCTGACAATATCCTCAAGGGCTT...CTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGACTCCCTGTCCCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp TCCAGTGTCTACCTCACTCTACCCCTAATACTGATCAGAGTTTGGTCCCAGCTGGAGGTGGCAAAGCCCTaGAGGATATTGTCAGCGTAC +
Preference number: 5 (lower is better)
Translates to: SSVYLTLPLILIRVWSQLEVAKP*RILSAY
Trigger: GTACGCTGACAATATCCTCAAGGGCTTTGCCACCTC...CAGCTGGGACCAAACTCTGATCAGTATTAGGGGTAGAGTGAGGTAGACACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGGCAGAGGCTATGGCTTaGGCTGCACCTCGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: QHILFAKTQLRDSVELAGAEAMA*AAPRGR
Trigger: CCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTGC...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp GGGAGGTTGAAGGAGTTCCAAGGACATTCTGAAGGTGACATAGCCCCTGTCCTCACGAGAAAAGGGAGGTaGAAGGAGTTCCAAGGACAT +
Preference number: 5 (lower is better)
Translates to: GRLKEFQGHSEGDIAPVLTRKGR*KEFQGH
Trigger: ATGTCCTTGGAACTCCTTCAACCTCCCTTTTCTCGT...GAGGACAGGGGCTATGTCACCTTCAGAATGTCCTTGGAACTCCTTCAACCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR CAA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGGAGGGCACTGCGAGCTaGAGCGTGTCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: QHILFAKTQLRDSVELAGEGTAS*SVSTYC
Trigger: GCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTC...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR CAA 90 bp GTATCAAGGAAGCTGGCCCAAGGCCACACAAAAGACGGAACTAGTAACATGATCGAGGTGGCAAAGCCCTaGAGGATATTGTCAGCGTAC +
Preference number: 5 (lower is better)
Translates to: VSRKLAQGHTKDGTSNMIEVAKP*RILSAY
Trigger: GTACGCTGACAATATCCTCAAGGGCTTTGCCACCTC...GATCATGTTACTAGTTCCGTCTTTTGTGTGGCCTTGGGCCAGCTTCCTTGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635285.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGAGGCAGGTGAGACCTTaGAGCACTTCCGCCATGACC +
Preference number: 5 (lower is better)
Translates to: QHILFAKTQLRDSVELAGRQVRP*STSAMT
Trigger: GGTCATGGCGGAAGTGCTCAAAGGTCTCACCTGCCT...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR CAA 90 bp TTTAAGTATCCTAGCATCTCAGTGAACAGGCATTACTATTTCCACCCCCAATTTGAGGGCACTGCGAGCTaGAGCGTGTCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: FKYPSISVNRHYYFHPQFEGTAS*SVSTYC
Trigger: GCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTC...AAATTGGGGGTGGAAATAGTAATGCCTGTTCACTGAGATGCTAGGATACTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376512.2
ENST00000634461.1
ENST00000635015.1
CDS-3UTR CAA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGAGGGCACTGCGAGCTaGAGCGTGTCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: DTQHILFAKTQLRDSVELEGTAS*SVSTYC
Trigger: GCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTC...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR CAA 90 bp CCAAAAATAAGCCTACATCTGGCAACTGACAGTGTCTTAAATACAATGAGATTCGAGGGCACTGCGAGCTaGAGCGTGTCCACATACTGC +
Preference number: 5 (lower is better)
Translates to: PKISLHLATDSVLNTMRFEGTAS*SVSTYC
Trigger: GCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTC...GAATCTCATTGTATTTAAGACACTGTCAGTTGCCAGATGTAGGCTTATTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000445167.7
ENST00000635628.1
CDS-3UTR CAA 90 bp CAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGGCAGGGAATACTGATCAGAGTTaGGTCCCAGCTGGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: QHILFAKTQLRDSVELAGNTDQS*VPAGPR
Trigger: CCTTGGCCCAGCTGGGACCAAACTCTGATCAGTATT...CCCTGCCAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000376529.8
ENST00000635285.1
ENST00000635460.1
ENST00000635628.1
CDS-3UTR CAA 90 bp AAGCTGCCCACAAATAGCCTAAAGCTTATCTGTCACCAATCAAGGGCTCTTCACACGAGAAAAGGGAGGTaGAAGGAGTTCCAAGGACAT +
Preference number: 5 (lower is better)
Translates to: KLPTNSLKLICHQSRALHTRKGR*KEFQGH
Trigger: ATGTCCTTGGAACTCCTTCAACCTCCCTTTTCTCGT...GTGAAGAGCCCTTGATTGGTGACAGATAAGCTTTAGGCTATTTGTGGGCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376512.2
ENST00000635015.1
CDS-3UTR CAA 90 bp AAAGATCCAATGGCTCTATTTACATATAGCAAAGACAGCCCAGGCATCTTCCATGAGGTGGCAAAGCCCTaGAGGATATTGTCAGCGTAC +
Preference number: 5 (lower is better)
Translates to: KDPMALFTYSKDSPGIFHEVAKP*RILSAY
Trigger: GTACGCTGACAATATCCTCAAGGGCTTTGCCACCTC...ATGGAAGATGCCTGGGCTGTCTTTGCTATATGTAAATAGAGCCATTGGATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376521.6
ENST00000413561.7
ENST00000635628.1
CDS-3UTR CAA 90 bp GATACACAACACATTTTATTTGCAAAAACTCAGCTAAGAGATAGTGTGGAGCTGATATTGTCAGCGTACTaGACAACCACAGCCACCAGT +
Preference number: 5 (lower is better)
Translates to: DTQHILFAKTQLRDSVELILSAY*TTTATS
Trigger: ACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATAT...CAGCTCCACACTATCTCTTAGCTGAGTTTTTGCAAATAAAATGTGTTGTGTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247138.11
ENST00000376521.6
ENST00000635285.1
ENST00000635628.1
CDS GCA 72 bp GCGCCTGTGAGCCGCACTGGCGGTCCCCGGCTCCAATaGACCCGCGGAAACCGCCCCTGGCCCGGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: APVSRTGGPRLQ*TRGNRPWPGRR
Trigger: GCGGCGCCCGGGCCAGGGGCGGTTTCCGCGGGTGCATTGGAGCCGGGGACCGCCAGTGCGGCTCACAGGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000247138.11
ENST00000376512.2
ENST00000376521.6
ENST00000376529.8
ENST00000445167.7
ENST00000634665.1
ENST00000635238.1
ENST00000635285.1
ENST00000635460.1
CDS GCA 72 bp CCCGGGCGCCGCGGTGGAACCACCAGCCCCAACCGCTaGCATGTTGGCATCTGCCCGGCCCGTCCCCTCGGC +
Preference number: 6 (lower is better)
Translates to: PGRRGGTTSPNR*HVGICPARPLG
Trigger: GCCGAGGGGACGGGCCGGGCAGATGCCAACATGGCAGCGGTTGGGGCTGGTGGTTCCACCGCGGCGCCCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376512.2
ENST00000376521.6
ENST00000445167.7
ENST00000634461.1
CDS GCA 72 bp GACTGTCTCACCCGCACTGGCGGTCCCCGGCTCCAATaGACCCGCGGAAACCGCCCCTGGCCCGGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: DCLTRTGGPRLQ*TRGNRPWPGRR
Trigger: GCGGCGCCCGGGCCAGGGGCGGTTTCCGCGGGTGCATTGGAGCCGGGGACCGCCAGTGCGGGTGAGACAGTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616181.5
ENST00000635015.1
ENST00000635628.1
CDS GCA 72 bp GAGAAGCAACTCCGCACTGGCGGTCCCCGGCTCCAATaGACCCGCGGAAACCGCCCCTGGCCCGGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: EKQLRTGGPRLQ*TRGNRPWPGRR
Trigger: GCGGCGCCCGGGCCAGGGGCGGTTTCCGCGGGTGCATTGGAGCCGGGGACCGCCAGTGCGGAGTTGCTTCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452555.7
CDS GCA 72 bp CTTCACGTTACCCGCACTGGCGGTCCCCGGCTCCAATaGACCCGCGGAAACCGCCCCTGGCCCGGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: LHVTRTGGPRLQ*TRGNRPWPGRR
Trigger: GCGGCGCCCGGGCCAGGGGCGGTTTCCGCGGGTGCATTGGAGCCGGGGACCGCCAGTGCGGGTAACGTGAAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634461.1
ENST00000635589.1
CDS CCA 72 bp CACCCGCGGAAACCGCCCCTGGCCCGGGCGCCGCGGTaGAACCACCAGCCCCAACCGCTGCCATGTTGGCAT +
Preference number: 6 (lower is better)
Translates to: HPRKPPLARAPR*NHQPQPLPCWH
Trigger: ATGCCAACATGGCAGCGGTTGGGGCTGGTGGTTCCACCGCGGCGCCCGGGCCAGGGGCGGTTTCCGCGGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000247138.11
ENST00000376512.2
ENST00000376521.6
ENST00000376529.8
ENST00000445167.7
ENST00000452555.7
ENST00000616181.5
ENST00000634461.1
ENST00000634665.1
ENST00000635015.1
ENST00000635238.1
ENST00000635285.1
ENST00000635589.1
ENST00000635628.1
CDS CCA 72 bp CCATGCGACTGCTCGGGCAGACTGTCTCACCCGCACTaGCGGTCCCCGGCTCCAATGCACCCGCGGAAACCG +
Preference number: 6 (lower is better)
Translates to: PCDCSGRLSHPH*RSPAPMHPRKP
Trigger: CGGTTTCCGCGGGTGCATTGGAGCCGGGGACCGCCAGTGCGGGTGAGACAGTCTGCCCGAGCAGTCGCATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616181.5
ENST00000635015.1
ENST00000635628.1
CDS TCA 72 bp GCAAACCCTGGCCACGCGCCTCGGCTTCCTCCCAAGTaGGAAGCAACTCCGCACTGGCGGTCCCCGGCTCCA +
Preference number: 6 (lower is better)
Translates to: ANPGHAPRLPPK*EATPHWRSPAP
Trigger: TGGAGCCGGGGACCGCCAGTGCGGAGTTGCTTCTCACTTGGGAGGAAGCCGAGGCGCGTGGCCAGGGTTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452555.7
CDS TCA 72 bp TCCGCGTTCGTCACTTCCGCTGCCGGGCCACCTGAGTaGAGGTGGAGCGAGAGCCGGGATCGTCAGGGTGGT +
Preference number: 6 (lower is better)
Translates to: SAFVTSAAGPPE*RWSESRDRQGG
Trigger: ACCACCCTGACGATCCCGGCTCTCGCTCCACCTTCACTCAGGTGGCCCGGCAGCGGAAGTGACGAACGCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376521.6
CDS TCA 72 bp CACTTCCGCGTTCGTCACTTCCGCTGCCGGGCCACCTaGGTGAAGGTGGAGCGAGAGCCGGGATCGTCAGGG +
Preference number: 6 (lower is better)
Translates to: HFRVRHFRCRAT*VKVEREPGSSG
Trigger: CCCTGACGATCCCGGCTCTCGCTCCACCTTCACTCAGGTGGCCCGGCAGCGGAAGTGACGAACGCGGAAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376521.6
CDS CAA 90 bp CAGCCCCTCTTCTGTGCGAAGAGCAGCAGCAGGCAGGTGAGACCTTaGAGCACTTCCGCCATGACCACAGCAGTGGTGGCAAAGAAGCGG +
Preference number: 6 (lower is better)
Translates to: QPLFCAKSSSRQVRP*STSAMTTAVVAKKR
Trigger: CCGCTTCTTTGCCACCACTGCTGTGGTCATGGCGGAAGTGCTCAAAGGTCTCACCTGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634665.1
CDS GCA 72 bp AGAGAGGGCACTGCGAGCTTGAGCGTGTCCACATACTaGACCAGGACAGCCCCTCTTCTGTGCGAAGAGCAG +
Preference number: 6 (lower is better)
Translates to: REGTASLSVSTY*TRTAPLLCEEQ
Trigger: CTGCTCTTCGCACAGAAGAGGGGCTGTCCTGGTGCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634665.1
CDS GCA 72 bp CATCGGCCCATTCCTGTCACTAGACCCGCCTTATCCTaGCGTTCGTCCGCTTCACTGATCGCGCTTTCCAGA +
Preference number: 6 (lower is better)
Translates to: HRPIPVTRPALS*RSSASLIALSR
Trigger: TCTGGAAAGCGCGATCAGTGAAGCGGACGAACGGCAGGATAAGGCGGGTCTAGTGACAGGAATGGGCCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376515.8
ENST00000376521.6
CDS TCA 72 bp GCAGGTTGCGCAGCCACACGGAGCCTGAGCTGCCTTTaGGGATCTTCTCAAAGTAGACACCTGGAAAGTGGC +
Preference number: 6 (lower is better)
Translates to: AGCAATRSLSCL*GSSQSRHLESG
Trigger: GCCACTTTCCAGGTGTCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGCTCCGTGTGGCTGCGCAACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413561.7
CDS CCA 72 bp GTGAAGGTGGAGCGAGAGCCGGGATCGTCAGGGTGGTaGCTTTTCTCCTCCGCTCCTAAAAGCTCAATGTAT +
Preference number: 6 (lower is better)
Translates to: VKVEREPGSSGW*LFSSAPKSSMY
Trigger: ATACATTGAGCTTTTAGGAGCGGAGGAGAAAAGCCACCACCCTGACGATCCCGGCTCTCGCTCCACCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376521.6
ENST00000446885.1