RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC32A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101438

Ensembl transcript IDs: ENST00000217420.2

Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCCCCGCCGCGGCTTCTCGCCTTCCGGCTTCGTTGAAGGAAATTaGCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGG +
Preference number: 1 (lower is better)
Translates to: WPRRGFSPSGFVEGN*PPKMDFPVSLSRCR
Trigger: CCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTCCTTCAACGAAGCCGGAAGGCGAGAAGCCGCGGCGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR TCA 90 bp GCAGGCAAGCTGGCCCCGCCGCGGCTTCTCGCCTTCCGGCTTCGTTaGAGGAAATTGCCCACCCAAAATGGATTTCCCAGTCAGCCTTTC +
Preference number: 1 (lower is better)
Translates to: AGKLAPPRLLAFRLR*RKLPTQNGFPSQPF
Trigger: GAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTCCTTCAACGAAGCCGGAAGGCGAGAAGCCGCGGCGGGGCCAGCTTGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CCA 90 bp CCCGCTGCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTTGCTaGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGGATGTG +
Preference number: 1 (lower is better)
Translates to: PAAGLKRLRNGKRSC*KWLDAVDSELWMDV
Trigger: CACATCCATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR TCA 90 bp CCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTaGAACGTCTCCGGAATGGGAAGCGCTCTTGCTGGAAATGGCTGG +
Preference number: 1 (lower is better)
Translates to: PTQNGFPSQPFPLQG*NVSGMGSALAGNGW
Trigger: CCAGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CCA 90 bp TTCCCAGTCAGCCTTTCCCGCTGCAGGGTTGAAACGTCTCCGGAATaGGAAGCGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGA +
Preference number: 1 (lower is better)
Translates to: FPVSLSRCRVETSPE*EALLLEMAGRCRFR
Trigger: TCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCGGGAAAGGCTGACTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR GCA 90 bp TTTCCCGCTGCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTTaGTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGGAT +
Preference number: 1 (lower is better)
Translates to: FPAAGLKRLRNGKRS*WKWLDAVDSELWMD
Trigger: ATCCATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCGGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR GCA 90 bp GGAAATTGCCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTaGAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTTGCTGGAA +
Preference number: 1 (lower is better)
Translates to: GNCPPKMDFPVSLSR*RVETSPEWEALLLE
Trigger: TTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CCA 90 bp GCTTCTCGCCTTCCGGCTTCGTTGAAGGAAATTGCCCACCCAAAATaGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTGAAACGTCTC +
Preference number: 1 (lower is better)
Translates to: ASRLPASLKEIAHPK*ISQSAFPAAGLKRL
Trigger: GAGACGTTTCAACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTCCTTCAACGAAGCCGGAAGGCGAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CCA 90 bp AAGCGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTaGATGGATGTGAAATATTCCCCCAAGGTCAAGTTGCCACGCCTG +
Preference number: 1 (lower is better)
Translates to: KRSCWKWLDAVDSEL*MDVKYSPKVKLPRL
Trigger: CAGGCGTGGCAACTTGACCTTGGGGGAATATTTCACATCCATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CCA 90 bp GCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTTGCTGGAAATaGCTGGACGCTGTAGATTCCGAGCTCTGGATGGATGTGAAATAT +
Preference number: 1 (lower is better)
Translates to: AGLKRLRNGKRSCWK*LDAVDSELWMDVKY
Trigger: ATATTTCACATCCATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR TCA 90 bp CACACGCACAGTAGAACAGTTCCACACCTGATAAATTGCACAAGATaGGAGTTTAGATTCCTGAAAACCGGCAGGCAAGCTGGCCCCGCC +
Preference number: 1 (lower is better)
Translates to: HTHSRTVPHLINCTR*EFRFLKTGRQAGPA
Trigger: GGCGGGGCCAGCTTGCCTGCCGGTTTTCAGGAATCTAAACTCTCATCTTGTGCAATTTATCAGGTGTGGAACTGTTCTACTGTGCGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR-3UTR GCA 90 bp GGAAATTGCCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTGCCACGCCTGCGAGCTaGGCCCCCTCTCCCTCCCTT +
Preference number: 2 (lower is better)
Translates to: GNCPPKMDFPVSLSRCRVATPAS*APSPSL
Trigger: AAGGGAGGGAGAGGGGGCGCAGCTCGCAGGCGTGGC...AACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR-3UTR GCA 90 bp GGGAAGCGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGTCAAGTTGCCACGCCTaGGAGCTGCGCCCCCTCTCC +
Preference number: 2 (lower is better)
Translates to: GKRSCWKWLDAVDSELWMSSCHA*ELRPLS
Trigger: GGAGAGGGGGCGCAGCTCGCAGGCGTGGCAACTTGA...CATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CAA 90 bp GATTCCGAGCTCTGGATGGATGTGAAATATTCCCCCAAGGTCAAGTaGCCACGCCTGCGAGCTGCGCCCCCTCTCCCTCCCTTCCCAACC +
Preference number: 2 (lower is better)
Translates to: DSELWMDVKYSPKVK*PRLRAAPPLPPFPT
Trigger: GGTTGGGAAGGGAGGGAGAGGGGGCGCAGCTCGCAGGCGTGGCAACTTGACCTTGGGGGAATATTTCACATCCATCCAGAGCTCGGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CAA 90 bp GGCAGGCAAGCTGGCCCCGCCGCGGCTTCTCGCCTTCCGGCTTCGTaGAAGGAAATTGCCCACCCAAAATGGATTTCCCAGTCAGCCTTT +
Preference number: 2 (lower is better)
Translates to: GRQAGPAAASRLPAS*KEIAHPKWISQSAF
Trigger: AAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTCCTTCAACGAAGCCGGAAGGCGAGAAGCCGCGGCGGGGCCAGCTTGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CAA 90 bp CTTTCCCGCTGCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTaGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGGA +
Preference number: 2 (lower is better)
Translates to: LSRCRVETSPEWEAL*LEMAGRCRFRALDG
Trigger: TCCATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCGGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CAA 90 bp GCCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTaGAAACGTCTCCGGAATGGGAAGCGCTCTTGCTGGAAATGGCTG +
Preference number: 2 (lower is better)
Translates to: AHPKWISQSAFPAAG*KRLRNGKRSCWKWL
Trigger: CAGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR-3UTR GCA 90 bp GAAATTGCCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTGAAGGACAGAGAACCCTaGCCGCAAATGCACCCCGCC +
Preference number: 2 (lower is better)
Translates to: EIAHPKWISQSAFPAAGLKDREP*PQMHPA
Trigger: GGCGGGGTGCATTTGCGGGCAGGGTTCTCTGTCCTT...CAACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR-3UTR CCA 90 bp GAAATTGCCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTGTGTCGGGGCCCCACTTaGAAGGACAGAGAACCCTGC +
Preference number: 2 (lower is better)
Translates to: EIAHPKWISQSAFPAAGLCRGPT*KDREPC
Trigger: GCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACA...CAACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR-3UTR CCA 90 bp TGGATGGATGTGAAATATTCCCCCAAGGTCAAGTTGCCACGCCTGCGAGCTGCGAACCCCCTCGATGACTaGAACCAAAGTGTCGGGGCC +
Preference number: 2 (lower is better)
Translates to: WMDVKYSPKVKLPRLRAANPLDD*NQSVGA
Trigger: GGCCCCGACACTTTGGTTCCAGTCATCGAGGGGGTT...CGCAGCTCGCAGGCGTGGCAACTTGACCTTGGGGGAATATTTCACATCCATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR-3UTR CCA 90 bp GGAAAAGAAAGGACAACAGAAACGCAGACGCGATGGATCGTGAATCCCTGTCCCGAGATGTTTAAAGCTTaGCCTCCCAAGCGCGGCGGC +
Preference number: 2 (lower is better)
Translates to: GKERTTETQTRWIVNPCPEMFKA*PPKRGG
Trigger: GCCGCCGCGCTTGGGAGGCCAAGCTTTAAACATCTC...GGGACAGGGATTCACGATCCATCGCGTCTGCGTTTCTGTTGTCCTTTCTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR-3UTR CCA 90 bp GAGCTCTGGATGGATGTGAAATATTCCCCCAAGGTCAAGTTGCCACGCCTGCGAGAAACGCAGACGCGATaGATCGTGAATCCCTGTCCC +
Preference number: 2 (lower is better)
Translates to: ELWMDVKYSPKVKLPRLRETQTR*IVNPCP
Trigger: GGGACAGGGATTCACGATCCATCGCGTCTGCGTTTC...TCGCAGGCGTGGCAACTTGACCTTGGGGGAATATTTCACATCCATCCAGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR-3UTR CCA 90 bp AAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCCAAAACCAGGGTGTTGTaGAAAAGAAAGGACAACAGA +
Preference number: 2 (lower is better)
Translates to: KVSGPHLEGQRTLPANAPKTRVL*KRKDNR
Trigger: TCTGTTGTCCTTTCTTTTCCACAACACCCTGGTTTT...GGGTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR-3UTR CCA 90 bp TTTCATCTTATTCACCACGAGCACACCACACGCACAGTAGAACAGTTCCACACCGGGAAGCGCTCTTGCTaGAAATGGCTGGACGCTGTA +
Preference number: 2 (lower is better)
Translates to: FHLIHHEHTTRTVEQFHTGKRSC*KWLDAV
Trigger: TACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCC...GGTGTGGAACTGTTCTACTGTGCGTGTGGTGTGCTCGTGGTGAATAAGATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR-3UTR TCA 90 bp TTTCATCTTATTCACCACGAGCACACCACACGCACAGTAGAACAGTTCCACACCAGCTCTGGATGGATGTaGAATATTCCCCCAAGGTCA +
Preference number: 2 (lower is better)
Translates to: FHLIHHEHTTRTVEQFHTSSGWM*NIPPRS
Trigger: TGACCTTGGGGGAATATTTCACATCCATCCAGAGCT...GGTGTGGAACTGTTCTACTGTGCGTGTGGTGTGCTCGTGGTGAATAAGATGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CCA 72 bp AGCCTTTCCCGCTGCAGGGTTGAAACGTCTCCGGAATaGGAAGCGCTCTTGCTGGAAATGGCTGGACGCTGT +
Preference number: 3 (lower is better)
Translates to: SLSRCRVETSPE*EALLLEMAGRC
Trigger: ACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCGGGAAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR GCA 72 bp GCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTTaGTGGAAATGGCTGGACGCTGTAGATTCCGAGCTC +
Preference number: 3 (lower is better)
Translates to: AGLKRLRNGKRS*WKWLDAVDSEL
Trigger: GAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR GCA 72 bp CCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTaGAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTC +
Preference number: 3 (lower is better)
Translates to: PPKMDFPVSLSR*RVETSPEWEAL
Trigger: GAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CCA 72 bp GGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTTGCTaGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGG +
Preference number: 3 (lower is better)
Translates to: GLKRLRNGKRSC*KWLDAVDSELW
Trigger: CCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR TCA 72 bp AATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTaGAACGTCTCCGGAATGGGAAGCGCTCTTGCTGGA +
Preference number: 3 (lower is better)
Translates to: NGFPSQPFPLQG*NVSGMGSALAG
Trigger: TCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR GCA 72 bp CGCGGCTTCTCGCCTTCCGGCTTCGTTGAAGGAAATTaGCCACCCAAAATGGATTTCCCAGTCAGCCTTTCC +
Preference number: 3 (lower is better)
Translates to: RGFSPSGFVEGN*PPKMDFPVSLS
Trigger: GGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTCCTTCAACGAAGCCGGAAGGCGAGAAGCCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CCA 72 bp AAACGTCTCCGGAATGGGAAGCGCTCTTGCTGGAAATaGCTGGACGCTGTAGATTCCGAGCTCTGGATGGAT +
Preference number: 3 (lower is better)
Translates to: KRLRNGKRSCWK*LDAVDSELWMD
Trigger: ATCCATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CCA 72 bp CTTCCGGCTTCGTTGAAGGAAATTGCCCACCCAAAATaGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTG +
Preference number: 3 (lower is better)
Translates to: LPASLKEIAHPK*ISQSAFPAAGL
Trigger: CAACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTCCTTCAACGAAGCCGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR-3UTR CAA 90 bp TGGATGGATGTGAAATATTCCCCCAAGGTCAAGTTGCCACGCCTGCGAGCTGCGCCCAAAACCAGGGTGTaGTGGAAAAGAAAGGACAAC +
Preference number: 3 (lower is better)
Translates to: WMDVKYSPKVKLPRLRAAPKTRV*WKRKDN
Trigger: GTTGTCCTTTCTTTTCCACAACACCCTGGTTTTGGG...CGCAGCTCGCAGGCGTGGCAACTTGACCTTGGGGGAATATTTCACATCCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CCA 72 bp TGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTaGATGGATGTGAAATATTCCCCCAAGGTCAAGTTG +
Preference number: 3 (lower is better)
Translates to: CWKWLDAVDSEL*MDVKYSPKVKL
Trigger: CAACTTGACCTTGGGGGAATATTTCACATCCATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp GACTGGAACCAAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAACCGGCAGGCAAGCTaGCCCCGCCGCGGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: DWNQSVGAPLGRTENPARNRQAS*PRRGFS
Trigger: CGAGAAGCCGCGGCGGGGCCAGCTTGCCTGCCGGTT...GCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTTGGTTCCAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR TCA 90 bp CCAAGGTCAAGTTGCCACGCCTGCGAGCTGCGCCCCCTCTCCCTCCCTTCCCAACTGCCTCCCACGCCGTaGTTTTGGGCTTGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: PRSSCHACELRPLSLPSQLPPTP*FWACRG
Trigger: GCCACGACAAGCCCAAAATCACGGCGTGGGAGGCAG...TTGGGAAGGGAGGGAGAGGGGGCGCAGCTCGCAGGCGTGGCAACTTGACCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp AGGAACCAGAGATGTTTAAAGCTTGGCCTCCCAAGCGCGGCGGCAGGGCGCACTGCGGGGGCTCGCCCTTaGGCCCTAGTCCTCCGCGTT +
Preference number: 4 (lower is better)
Translates to: RNQRCLKLGLPSAAAGRTAGARP*ALVLRV
Trigger: AACGCGGAGGACTAGGGCGCAAGGGCGAGCCCCCGC...AGTGCGCCCTGCCGCCGCGCTTGGGAGGCCAAGCTTTAAACATCTCTGGTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp CCAAGGTCAAGTTGCCACGCCTGCGAGCTGCGCCCCCTCTCCCTCCCTTCCCAAGGGCGCAGCAGGCGTTaGCTATGGCCACGTACGAGT +
Preference number: 4 (lower is better)
Translates to: PRSSCHACELRPLSLPSQGRSRR*LWPRTS
Trigger: ACTCGTACGTGGCCATAGCCAACGCCTGCTGCGCCC...TTGGGAAGGGAGGGAGAGGGGGCGCAGCTCGCAGGCGTGGCAACTTGACCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR TCA 90 bp AAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCCTCTCGTCGGCCCAGGTaGGGTAGGCGACGAGCGCGA +
Preference number: 4 (lower is better)
Translates to: KVSGPHLEGQRTLPANAPSRRPR*GRRRAR
Trigger: TCGCGCTCGTCGCCTACCTCACCTGGGCCGACGAGA...GGGTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR TCA 90 bp CCAAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACGCGCGAAGAGGCCCTTaGGCACGCAGGCTGCGATGT +
Preference number: 4 (lower is better)
Translates to: PKCRGPTWKDREPCPQMHARRGP*ARRLRC
Trigger: ACATCGCAGCCTGCGTGCTCAAGGGCCTCTTCGCGC...GTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp CCAAGGTCAAGTTGCCACGCCTGCGAGCTGCGCCCCCTCTCCCTCCCTTCCCAATTCAGGATGTCCATCTaGAGGCCCTGGCGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: PRSSCHACELRPLSLPSQFRMSI*RPWRCS
Trigger: TGAGCACCGCCAGGGCCTGCAGATGGACATCCTGAA...TTGGGAAGGGAGGGAGAGGGGGCGCAGCTCGCAGGCGTGGCAACTTGACCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp AAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCCATGGACCAGGACTTCTaGGACACGGGCAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: KVSGPHLEGQRTLPANAPMDQDF*DTGSPG
Trigger: CCCGGGGCTGCCCGTGTCGCAGAAGTCCTGGTCCAT...GGGTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp CCAAGGTCAAGTTGCCACGCCTGCGAGCTGCGCCCCCTCTCCCTCCCTTCCCAAGGAAAAAGGCGCGGCTaGCTTCCTGGAAGAGCGACT +
Preference number: 4 (lower is better)
Translates to: PRSSCHACELRPLSLPSQGKRRG*LPGRAT
Trigger: AGTCGCTCTTCCAGGAAGGCAGCCGCGCCTTTTTCC...TTGGGAAGGGAGGGAGAGGGGGCGCAGCTCGCAGGCGTGGCAACTTGACCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp AAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCCTGGCCATGGCGGCGGTaGGGACAGCGGAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: KVSGPHLEGQRTLPANAPWPWRR*GQRKGQ
Trigger: CTGTCCTTTCCGCTGTCCCCACCGCCGCCATGGCCA...GGGTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp CCAAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACAGCCGCCGTGCAGGATaGCGTAGGGTAGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PKCRGPTWKDREPCPQMHSRRAG*RRVGPA
Trigger: TGCTGGGCCTACCCTACGCCATCCTGCACGGCGGCT...GTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp TGGATGGATGTGAAATATTCCCCCAAGGTCAAGTTGCCACGCCTGCGAGCTGCGTCGGCCGCCCAGCGTTaGGAAGCGCGGGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: WMDVKYSPKVKLPRLRAASAAQR*EARGAA
Trigger: TGCTGCGCCCCGCGCTTCCCAACGCTGGGCGGCCGA...CGCAGCTCGCAGGCGTGGCAACTTGACCTTGGGGGAATATTTCACATCCATCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp CGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGGATGTGGTCGCTATCTCCGCTTaGTCTCCGCGCGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: RSCWKWLDAVDSELWMDVVAISA*SPRGAP
Trigger: CGGGGCGCCGCGCGGAGAGCAAGCGGAGATAGCGAC...CACATCCATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp AAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCCATGCGGGGAACGCGATaGAAGAAGGCGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KVSGPHLEGQRTLPANAPMRGTR*KKARAG
Trigger: CCCAGCCCTCGCCTTCTTGCATCGCGTTCCCCGCAT...GGGTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp AAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCCGCGCGGCTGCCTTCCTaGAAGAGCGACTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KVSGPHLEGQRTLPANAPARLPS*KSDFSS
Trigger: GCTGGAGAAGTCGCTCTTCCAGGAAGGCAGCCGCGC...GGGTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp AAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCCCCACGTTGGACAGCTTaGTGCGGAGCAAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: KVSGPHLEGQRTLPANAPPRWTA*CGARWP
Trigger: TGGCCACCTTGCTCCGCAGCAAGCTGTCCAACGTGG...GGGTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp GGGAAGCGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGTCGAGGTCGTCGCAATaGGCGAAGCCCACCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GKRSCWKWLDAVDSELWMSRSSQ*AKPTAS
Trigger: GGAGGCGGTGGGCTTCGCGCATTGCGACGACCTCGA...CATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp GGGAAGCGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGAGGCCCTCGAGGGAGTaGACGAAGCCGGACACGCTG +
Preference number: 4 (lower is better)
Translates to: GKRSCWKWLDAVDSELWMRPSRE*TKPDTL
Trigger: CAGCGTGTCCGGCTTCGTGCACTCCCTCGAGGGCCT...CATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp AAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCCAAGGACAGAGAACCCTaGCCGCAAATGCACCCCGCC +
Preference number: 4 (lower is better)
Translates to: KVSGPHLEGQRTLPANAPKDREP*PQMHPA
Trigger: GGCGGGGTGCATTTGCGGGCAGGGTTCTCTGTCCTT...GGGTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp GAAATTGCCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTGGCCACGCCTGCGAGCTaGGCCCCCTCTCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: EIAHPKWISQSAFPAAGLATPAS*APSPSL
Trigger: AAGGGAGGGAGAGGGGGCGCAGCTCGCAGGCGTGGC...CAACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp CGCTGCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTTGCTGGAAATGGCTTCAAGTTGCCACGCCTaGGAGCTGCGCCCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RCRVETSPEWEALLLEMASSCHA*ELRPLS
Trigger: GGAGAGGGGGCGCAGCTCGCAGGCGTGGCAACTTGA...AGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp CGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGGATGTGCGCCCCGGGGCTCTCTaGCTCATGACCCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RSCWKWLDAVDSELWMDVRPGAL*LMTLAA
Trigger: AGCTGCGAGGGTCATGAGCCAGAGAGCCCCGGGGCG...CACATCCATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp CCAAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACAGCAGGCGTTGGCTATaGCCACGTACGAGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: PKCRGPTWKDREPCPQMHSRRWL*PRTSPA
Trigger: TGCGGGACTCGTACGTGGCCATAGCCAACGCCTGCT...GTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CAA 72 bp CCCTCGATGACTGGAACCAAAGTGTCGGGGCCCCACTaGGAAGGACAGAGAACCCTGCCCGCAAATGCACCC +
Preference number: 4 (lower is better)
Translates to: PSMTGTKVSGPH*EGQRTLPANAP
Trigger: GGGTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTTGGTTCCAGTCATCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CAA 72 bp CTCTGGATGGATGTGAAATATTCCCCCAAGGTCAAGTaGCCACGCCTGCGAGCTGCGCCCCCTCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LWMDVKYSPKVK*PRLRAAPPLPP
Trigger: GGGAGGGAGAGGGGGCGCAGCTCGCAGGCGTGGCAACTTGACCTTGGGGGAATATTTCACATCCATCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp AGGAACCAGAGATGTTTAAAGCTTGGCCTCCCAAGCGCGGCGGCAGGGCGCACTGGTCACGTTCCAGCCTaGCTCCCACGCCGTGATTTT +
Preference number: 4 (lower is better)
Translates to: RNQRCLKLGLPSAAAGRTGHVPA*LPRRDF
Trigger: AAAATCACGGCGTGGGAGGCAGGCTGGAACGTGACC...AGTGCGCCCTGCCGCCGCGCTTGGGAGGCCAAGCTTTAAACATCTCTGGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp CCAAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCGAACATGCCCTGGATaGCGTTGGTCACGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PKCRGPTWKDREPCPQMHRTCPG*RWSRSS
Trigger: GCTGGAACGTGACCAACGCCATCCAGGGCATGTTCG...GTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp AGGAACCAGAGATGTTTAAAGCTTGGCCTCCCAAGCGCGGCGGCAGGGCGCACTGAGATGTTTAAAGCTTaGCCTCCCAAGCGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: RNQRCLKLGLPSAAAGRTEMFKA*PPKRGG
Trigger: GCCGCCGCGCTTGGGAGGCCAAGCTTTAAACATCTC...AGTGCGCCCTGCCGCCGCGCTTGGGAGGCCAAGCTTTAAACATCTCTGGTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR TCA 90 bp CGCTGCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTTGCTGGAAATGGCTTCATCCGTGGCCGCCTaGAAACCCATCCTGGCGAAC +
Preference number: 4 (lower is better)
Translates to: RCRVETSPEWEALLLEMASSVAA*KPILAN
Trigger: GTTCGCCAGGATGGGTTTTCAGGCGGCCACGGATGA...AGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR TCA 90 bp CGCTGCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTTGCTGGAAATGGCTCGTACAGGCACGCGATaGGGATCTTGCCGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: RCRVETSPEWEALLLEMARTGTR*GSCRCS
Trigger: GCTACACCGGCAAGATCCTCATCGCGTGCCTGTACG...AGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR TCA 90 bp CCAAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCGTCGATGTAGAACTTaGCCTTCTCCCAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PKCRGPTWKDREPCPQMHRRCRT*PSPRPS
Trigger: ACTGGGCCTGGGAGAAGGTCAAGTTCTACATCGACG...GTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR TCA 90 bp GGGAAGCGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGCCACCAGAAAGATGTTaGCCACGGCGCGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: GKRSCWKWLDAVDSELWMPPERC*PRRGWS
Trigger: GCTCCATCCGCGCCGTGGTCAACATCTTTCTGGTGG...CATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp CGCTGCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTTGCTGGAAATGGCTCGTTGGACAGCTTGCTaGGGAGCAAGGTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: RCRVETSPEWEALLLEMARWTAC*GARWPW
Trigger: CCATGGCCACCTTGCTCCGCAGCAAGCTGTCCAACG...AGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp TGGATGGATGTGAAATATTCCCCCAAGGTCAAGTTGCCACGCCTGCGAGCTGCGTGCAGGCCCTGGCGGTaGTCAAAGTCGAGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: WMDVKYSPKVKLPRLRAACRPWR*SKSRSS
Trigger: CGACGACCTCGACTTTGAGCACCGCCAGGGCCTGCA...CGCAGCTCGCAGGCGTGGCAACTTGACCTTGGGGGAATATTTCACATCCATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp AGGAACCAGAGATGTTTAAAGCTTGGCCTCCCAAGCGCGGCGGCAGGGCGCACTAACTCGCTGGGCTGCTaGATATTGCCCTCCAGCGAA +
Preference number: 4 (lower is better)
Translates to: RNQRCLKLGLPSAAAGRTNSLGC*ILPSSE
Trigger: TTCGCTGGAGGGCAATATGCAGCAGCCCAGCGAGTT...AGTGCGCCCTGCCGCCGCGCTTGGGAGGCCAAGCTTTAAACATCTCTGGTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp AAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCCACGCAGGCTGCGATGTaGGTCCAGTTCATCATGCAG +
Preference number: 4 (lower is better)
Translates to: KVSGPHLEGQRTLPANAPTQAAM*VQFIMQ
Trigger: CTGCATGATGAACTGGACGCACATCGCAGCCTGCGT...GGGTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp GGAAAAGAAAGGACAACAGAAACGCAGACGCGATGGATCGTGAATCCCTGTCCCCTGGACCGGGCAAGCTaGCAGCAGGTCTGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: GKERTTETQTRWIVNPCPLDRAS*QQVWRS
Trigger: GCTCCGCCAGACCTGCTGCCAGCTTGCCCGGTCCAG...GGGACAGGGATTCACGATCCATCGCGTCTGCGTTTCTGTTGTCCTTTCTTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp CGCTGCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTTGCTGGAAATGGCTCATGACCCTCGCAGCTaGCGTTCGAGGCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: RCRVETSPEWEALLLEMAHDPRS*RSRLSQ
Trigger: CTGAGAGAGCCTCGAACGCCAGCTGCGAGGGTCATG...AGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp AGGAACCAGAGATGTTTAAAGCTTGGCCTCCCAAGCGCGGCGGCAGGGCGCACTATTTTGGGCTTGTCGTaGCCCCCGAATTCGCCACCA +
Preference number: 4 (lower is better)
Translates to: RNQRCLKLGLPSAAAGRTILGLS*PPNSPP
Trigger: TGGTGGCGAATTCGGGGGCCACGACAAGCCCAAAAT...AGTGCGCCCTGCCGCCGCGCTTGGGAGGCCAAGCTTTAAACATCTCTGGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp CCAAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCAGTTCATCATGCAGTaGAACTCGCTGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PKCRGPTWKDREPCPQMHQFIMQ*NSLGCC
Trigger: GCAGCAGCCCAGCGAGTTCCACTGCATGATGAACTG...GTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp AAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCCGCAGGTGAAAGAGGCTaGGCAGCAAGAAACAGAGGC +
Preference number: 4 (lower is better)
Translates to: KVSGPHLEGQRTLPANAPAGERG*AARNRG
Trigger: GCCTCTGTTTCTTGCTGCCCAGCCTCTTTCACCTGC...GGGTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR TCA 90 bp GGAAAAGAAAGGACAACAGAAACGCAGACGCGATGGATCGTGAATCCCTGTCCCGGGCTCTCTGGCTCATaGCCCTCGCAGCTGGCGTTC +
Preference number: 4 (lower is better)
Translates to: GKERTTETQTRWIVNPCPGLSGS*PSQLAF
Trigger: GAACGCCAGCTGCGAGGGTCATGAGCCAGAGAGCCC...GGGACAGGGATTCACGATCCATCGCGTCTGCGTTTCTGTTGTCCTTTCTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR TCA 90 bp CCAAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACTCATCACCAGCTCGATaGTCTGCGCTACGTTCACCA +
Preference number: 4 (lower is better)
Translates to: PKCRGPTWKDREPCPQMHSSPAR*SALRSP
Trigger: TGGTGAACGTAGCGCAGATCATCGAGCTGGTGATGA...GTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR TCA 90 bp AGGAACCAGAGATGTTTAAAGCTTGGCCTCCCAAGCGCGGCGGCAGGGCGCACTGGAAGCTGTTGTACATaGGGTTGCCACTCACCACCA +
Preference number: 4 (lower is better)
Translates to: RNQRCLKLGLPSAAAGRTGSCCT*GCHSPP
Trigger: TGGTGGTGAGTGGCAACCTCATGTACAACAGCTTCC...AGTGCGCCCTGCCGCCGCGCTTGGGAGGCCAAGCTTTAAACATCTCTGGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR TCA 90 bp TGGATGGATGTGAAATATTCCCCCAAGGTCAAGTTGCCACGCCTGCGAGCTGCGTGCAGATGCCGCCGATaGCGAAGATGGCGACGTCGA +
Preference number: 4 (lower is better)
Translates to: WMDVKYSPKVKLPRLRAACRCRR*RRWRRR
Trigger: TCGACGTCGCCATCTTCGTCATCGGCGGCATCTGCA...CGCAGCTCGCAGGCGTGGCAACTTGACCTTGGGGGAATATTTCACATCCATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp TGGATGGATGTGAAATATTCCCCCAAGGTCAAGTTGCCACGCCTGCGAGCTGCGCCATCCTGGCGAACATaGCGCTCATCTTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: WMDVKYSPKVKLPRLRAAPSWRT*RSSWPG
Trigger: CCCAGGCCAAGATGAGCGGCATGTTCGCCAGGATGG...CGCAGCTCGCAGGCGTGGCAACTTGACCTTGGGGGAATATTTCACATCCATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp CAGTCAGCCTTTCCCGCTGCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTACCAGCTCGATGATCTaGGCTACGTTCACCACTCGG +
Preference number: 4 (lower is better)
Translates to: QSAFPAAGLKRLRNGKRSTSSMI*ATFTTR
Trigger: CCGAGTGGTGAACGTAGCGCAGATCATCGAGCTGGT...AGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCGGGAAAGGCTGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp CCAAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACAATGGGAAGCGCTCTTaGTGGAAATGGCTGGACGCT +
Preference number: 4 (lower is better)
Translates to: PKCRGPTWKDREPCPQMHNGKRS*WKWLDA
Trigger: AGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCCATT...GTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp CGCTGCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTTGCTGGAAATGGCTGTCAGCCTTTCCCGCTaGAGGGTTGAAACGTCTCCG +
Preference number: 4 (lower is better)
Translates to: RCRVETSPEWEALLLEMAVSLSR*RVETSP
Trigger: CGGAGACGTTTCAACCCTGCAGCGGGAAAGGCTGAC...AGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp CCAAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCCTGAAAACCCATCCTaGCGAACATGCCGCTCATCT +
Preference number: 4 (lower is better)
Translates to: PKCRGPTWKDREPCPQMHPENPS*RTCRSS
Trigger: AGATGAGCGGCATGTTCGCCAGGATGGGTTTTCAGG...GTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp CGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGGATGTGTGTCGGGGCCCCACTTaGAAGGACAGAGAACCCTGC +
Preference number: 4 (lower is better)
Translates to: RSCWKWLDAVDSELWMDVCRGPT*KDREPC
Trigger: GCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACA...CACATCCATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp GGGAAGCGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGAACCCCCTCGATGACTaGAACCAAAGTGTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GKRSCWKWLDAVDSELWMNPLDD*NQSVGA
Trigger: GGCCCCGACACTTTGGTTCCAGTCATCGAGGGGGTT...CATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR TCA 90 bp GAAATTGCCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTGTTCGGTAGGCTTCGATaGGGCCCTCGAGGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: EIAHPKWISQSAFPAAGLFGRLR*GPRGSA
Trigger: TGCACTCCCTCGAGGGCCTCATCGAAGCCTACCGAA...CAACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp TGGAAAAGAAAGGACAACAGAAACGCAGACGCGATGGATCGTGAATCCCTGTCCCCCCCAAGGTCAAGTTaGCACGCCTGCGAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: WKRKDNRNADAMDRESLSPPRSS*HACELR
Trigger: GCGCAGCTCGCAGGCGTGGCAACTTGACCTTGGGGG...GGACAGGGATTCACGATCCATCGCGTCTGCGTTTCTGTTGTCCTTTCTTTTCCA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp GGAAATTGCCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTCAAGAAGGCGAGGGCTaGGGGGCGCAAAGTCGCTAT +
Preference number: 4 (lower is better)
Translates to: GNCPPKMDFPVSLSRCRVQEGEG*GAQSRY
Trigger: ATAGCGACTTTGCGCCCCCCAGCCCTCGCCTTCTTG...AACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp GAAATTGCCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTGTCCATCTGCAGGCCCTaGCGGTGCTCAAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: EIAHPKWISQSAFPAAGLSICRP*RCSKSR
Trigger: CCTCGACTTTGAGCACCGCCAGGGCCTGCAGATGGA...CAACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp CGCTGCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTTGCTGGAAATGGCTAGCACGAACATGCCCTaGATGGCGTTGGTCACGTTC +
Preference number: 4 (lower is better)
Translates to: RCRVETSPEWEALLLEMASTNMP*MALVTF
Trigger: GAACGTGACCAACGCCATCCAGGGCATGTTCGTGCT...AGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp AAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCCGACAGCGGCAAAGAATaGCAGAGGATAGGACAACAG +
Preference number: 4 (lower is better)
Translates to: KVSGPHLEGQRTLPANAPDSGKE*QRIGQQ
Trigger: CTGTTGTCCTATCCTCTGCCATTCTTTGCCGCTGTC...GGGTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR TCA 90 bp CGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGGATGTGGCCTTCCGGCTTCGTTaGAGGAAATTGCCCACCCAA +
Preference number: 4 (lower is better)
Translates to: RSCWKWLDAVDSELWMDVAFRLR*RKLPTQ
Trigger: TTGGGTGGGCAATTTCCTTCAACGAAGCCGGAAGGC...CACATCCATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp GAGCTCTGGATGGATGTGAAATATTCCCCCAAGGTCAAGTTGCCACGCCTGCGATGGGCTGCTGCATATTaGCCTCCAGCGAAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ELWMDVKYSPKVKLPRLRWAAAY*PPAKAG
Trigger: TCCTGCCTTCGCTGGAGGGCAATATGCAGCAGCCCA...TCGCAGGCGTGGCAACTTGACCTTGGGGGAATATTTCACATCCATCCAGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp GAAATTGCCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTGTGGAACTCGCTGGGCTaGTGCATATTGCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EIAHPKWISQSAFPAAGLWNSLG*CILPSS
Trigger: GCTGGAGGGCAATATGCAGCAGCCCAGCGAGTTCCA...CAACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp TGGATGGATGTGAAATATTCCCCCAAGGTCAAGTTGCCACGCCTGCGAGCTGCGGCGTCCAGTTCATCATaGAGTGGAACTCGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: WMDVKYSPKVKLPRLRAAASSSS*SGTRWA
Trigger: AGCCCAGCGAGTTCCACTGCATGATGAACTGGACGC...CGCAGCTCGCAGGCGTGGCAACTTGACCTTGGGGGAATATTTCACATCCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp CGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGGATGTGTCGAAGAAGACTTGGTaGCACAGCAGCTTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: RSCWKWLDAVDSELWMDVSKKTW*HSSLRQ
Trigger: CTGGCGCAAGCTGCTGTGGCACCAAGTCTTCTTCGA...CACATCCATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp TGGAAAAGAAAGGACAACAGAAACGCAGACGCGATGGATCGTGAATCCCTGTCCCGGACGTGGCCACGTTaGACAGCTTGCTGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: WKRKDNRNADAMDRESLSRTWPR*TACCGA
Trigger: TGCTCCGCAGCAAGCTGTCCAACGTGGCCACGTCCG...GGACAGGGATTCACGATCCATCGCGTCTGCGTTTCTGTTGTCCTTTCTTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp GCGGCTTCTCGCCTTCCGGCTTCGTTGAAGGAAATTGCCCACCCAAAATGGATTTGTTGGACACGGACGTaGCCACGTTGGACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: AASRLPASLKEIAHPKWICWTRT*PRWTAC
Trigger: GCAAGCTGTCCAACGTGGCCACGTCCGTGTCCAACA...AATCCATTTTGGGTGGGCAATTTCCTTCAACGAAGCCGGAAGGCGAGAAGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CAA 72 bp TGCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTaGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: CRVETSPEWEAL*LEMAGRCRFRA
Trigger: AGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
3UTR CAA 72 bp AAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTaGAAACGTCTCCGGAATGGGAAGCGCTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KWISQSAFPAAG*KRLRNGKRSCW
Trigger: CCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp GGAAAAGAAAGGACAACAGAAACGCAGACGCGATGGATCGTGAATCCCTGTCCCAGAAGGACCCGAGGATaGGGGGAACGCGATGCAAGA +
Preference number: 4 (lower is better)
Translates to: GKERTTETQTRWIVNPCPRRTRG*GERDAR
Trigger: TCTTGCATCGCGTTCCCCGCATCCTCGGGTCCTTCT...GGGACAGGGATTCACGATCCATCGCGTCTGCGTTTCTGTTGTCCTTTCTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp GGAAATTGCCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTGCAGAGGAGCTCCGCTaGCTCGCTGATAATGGATGT +
Preference number: 4 (lower is better)
Translates to: GNCPPKMDFPVSLSRCRVAEELR*LADNGC
Trigger: ACATCCATTATCAGCGAGGCAGCGGAGCTCCTCTGC...AACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp GGAAATTGCCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTCTTGAGCACGCAGGCTaGGATGTGCGTCCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: GNCPPKMDFPVSLSRCRVLEHAG*DVRPVH
Trigger: ATGAACTGGACGCACATCGCAGCCTGCGTGCTCAAG...AACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp TGGAAAAGAAAGGACAACAGAAACGCAGACGCGATGGATCGTGAATCCCTGTCCTGGCCTGGGACTTGTTaGACACGGACGTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: WKRKDNRNADAMDRESLSWPGTC*TRTWPR
Trigger: ACGTGGCCACGTCCGTGTCCAACAAGTCCCAGGCCA...GGACAGGGATTCACGATCCATCGCGTCTGCGTTTCTGTTGTCCTTTCTTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp GGAAAAGAAAGGACAACAGAAACGCAGACGCGATGGATCGTGAATCCCTGTCCCCCGCTCATCTTGGCCTaGGACTTGTTGGACACGGAC +
Preference number: 4 (lower is better)
Translates to: GKERTTETQTRWIVNPCPPLILA*DLLDTD
Trigger: GTCCGTGTCCAACAAGTCCCAGGCCAAGATGAGCGG...GGGACAGGGATTCACGATCCATCGCGTCTGCGTTTCTGTTGTCCTTTCTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp CGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGGATGTGACATGCCGCTCATCTTaGCCTGGGACTTGTTGGACA +
Preference number: 4 (lower is better)
Translates to: RSCWKWLDAVDSELWMDVTCRSS*PGTCWT
Trigger: TGTCCAACAAGTCCCAGGCCAAGATGAGCGGCATGT...CACATCCATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp TTTCATCTTATTCACCACGAGCACACCACACGCACAGTAGAACAGTTCCACACCCCGCCTCCTCATCCGTaGCCGCCTGAAAACCCATCC +
Preference number: 4 (lower is better)
Translates to: FHLIHHEHTTRTVEQFHTPPPHP*PPENPS
Trigger: GGATGGGTTTTCAGGCGGCCACGGATGAGGAGGCGG...GGTGTGGAACTGTTCTACTGTGCGTGTGGTGTGCTCGTGGTGAATAAGATGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp TGGAAAAGAAAGGACAACAGAAACGCAGACGCGATGGATCGTGAATCCCTGTCCTGCCCTGGATGGCGTTaGTCACGTTCCAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: WKRKDNRNADAMDRESLSCPGWR*SRSSLP
Trigger: AGGCAGGCTGGAACGTGACCAACGCCATCCAGGGCA...GGACAGGGATTCACGATCCATCGCGTCTGCGTTTCTGTTGTCCTTTCTTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp GGAAATTGCCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTTGCAGTGGAACTCGCTaGGCTGCTGCATATTGCCCT +
Preference number: 4 (lower is better)
Translates to: GNCPPKMDFPVSLSRCRVCSGTR*AAAYCP
Trigger: AGGGCAATATGCAGCAGCCCAGCGAGTTCCACTGCA...AACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR TCA 90 bp TGGAAAAGAAAGGACAACAGAAACGCAGACGCGATGGATCGTGAATCCCTGTCCTCCCAACCCCCTCGATaGCTGGAACCAAAGTGTCGG +
Preference number: 4 (lower is better)
Translates to: WKRKDNRNADAMDRESLSSQPPR*LEPKCR
Trigger: CCGACACTTTGGTTCCAGTCATCGAGGGGGTTGGGA...GGACAGGGATTCACGATCCATCGCGTCTGCGTTTCTGTTGTCCTTTCTTTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR TCA 90 bp CGCTGCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTTGCTGGAAATGGCTAGCTCTGGATGGATGTaGAATATTCCCCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: RCRVETSPEWEALLLEMASSGWM*NIPPRS
Trigger: TGACCTTGGGGGAATATTTCACATCCATCCAGAGCT...AGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR TCA 90 bp TGGAAAAGAAAGGACAACAGAAACGCAGACGCGATGGATCGTGAATCCCTGTCCTTCCCGCTGCAGGGTTaGAACGTCTCCGGAATGGGA +
Preference number: 4 (lower is better)
Translates to: WKRKDNRNADAMDRESLSFPLQG*NVSGMG
Trigger: TCCCATTCCGGAGACGTTTCAACCCTGCAGCGGGAA...GGACAGGGATTCACGATCCATCGCGTCTGCGTTTCTGTTGTCCTTTCTTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp GGAAAAGAAAGGACAACAGAAACGCAGACGCGATGGATCGTGAATCCCTGTCCCACGTCGAAGAAGACTTaGTGCCACAGCAGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: GKERTTETQTRWIVNPCPTSKKT*CHSSLR
Trigger: GCGCAAGCTGCTGTGGCACCAAGTCTTCTTCGACGT...GGGACAGGGATTCACGATCCATCGCGTCTGCGTTTCTGTTGTCCTTTCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp GCGGCTTCTCGCCTTCCGGCTTCGTTGAAGGAAATTGCCCACCCAAAATGGATTCGCTCTTGCTGGAAATaGCTGGACGCTGTAGATTCC +
Preference number: 4 (lower is better)
Translates to: AASRLPASLKEIAHPKWIRSCWK*LDAVDS
Trigger: GGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCG...AATCCATTTTGGGTGGGCAATTTCCTTCAACGAAGCCGGAAGGCGAGAAGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp GGAAAAGAAAGGACAACAGAAACGCAGACGCGATGGATCGTGAATCCCTGTCCCGGGAAGCGCTCTTGCTaGAAATGGCTGGACGCTGTA +
Preference number: 4 (lower is better)
Translates to: GKERTTETQTRWIVNPCPGKRSC*KWLDAV
Trigger: TACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCC...GGGACAGGGATTCACGATCCATCGCGTCTGCGTTTCTGTTGTCCTTTCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR TCA 90 bp GAGCTCTGGATGGATGTGAAATATTCCCCCAAGGTCAAGTTGCCACGCCTGCGAGAGAGTTTAGATTCCTaGAAACCGGCAGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: ELWMDVKYSPKVKLPRLRESLDS*KPAGKL
Trigger: CAGCTTGCCTGCCGGTTTTCAGGAATCTAAACTCTC...TCGCAGGCGTGGCAACTTGACCTTGGGGGAATATTTCACATCCATCCAGAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp TGGAAAAGAAAGGACAACAGAAACGCAGACGCGATGGATCGTGAATCCCTGTCCCCACCACGTACAGGATaGACGTCATCACCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: WKRKDNRNADAMDRESLSPPRTG*TSSPAR
Trigger: TCGAGCTGGTGATGACGTGCATCCTGTACGTGGTGG...GGACAGGGATTCACGATCCATCGCGTCTGCGTTTCTGTTGTCCTTTCTTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp TGGATGGATGTGAAATATTCCCCCAAGGTCAAGTTGCCACGCCTGCGAGCTGCGATATTGATGACGAAGTaGGCCAGAGTGCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: WMDVKYSPKVKLPRLRAAILMTK*ARVHSR
Trigger: TCTGCTGTGCACTCTGGCCCACTTCGTCATCAATAT...CGCAGCTCGCAGGCGTGGCAACTTGACCTTGGGGGAATATTTCACATCCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp TGGAAAAGAAAGGACAACAGAAACGCAGACGCGATGGATCGTGAATCCCTGTCCGAAACGCAGACGCGATaGATCGTGAATCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: WKRKDNRNADAMDRESLSETQTR*IVNPCP
Trigger: GGGACAGGGATTCACGATCCATCGCGTCTGCGTTTC...GGACAGGGATTCACGATCCATCGCGTCTGCGTTTCTGTTGTCCTTTCTTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp CGCTGCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTTGCTGGAAATGGCTGTAGATTCCGAGCTCTaGATGGATGTGAAATATTCC +
Preference number: 4 (lower is better)
Translates to: RCRVETSPEWEALLLEMAVDSEL*MDVKYS
Trigger: GGAATATTTCACATCCATCCAGAGCTCGGAATCTAC...AGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp GGGAAGCGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGAAAACCAGGGTGTTGTaGAAAAGAAAGGACAACAGA +
Preference number: 4 (lower is better)
Translates to: GKRSCWKWLDAVDSELWMKTRVL*KRKDNR
Trigger: TCTGTTGTCCTTTCTTTTCCACAACACCCTGGTTTT...CATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp TTTCATCTTATTCACCACGAGCACACCACACGCACAGTAGAACAGTTCCACACCGAAACGTCTCCGGAATaGGAAGCGCTCTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: FHLIHHEHTTRTVEQFHTETSPE*EALLLE
Trigger: TTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTC...GGTGTGGAACTGTTCTACTGTGCGTGTGGTGTGCTCGTGGTGAATAAGATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CCA 90 bp GGAAATTGCCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTATTGCCCACCCAAAATaGATTTCCCAGTCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: GNCPPKMDFPVSLSRCRVIAHPK*ISQSAF
Trigger: AAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAAT...AACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR GCA 90 bp TGGATGGATGTGAAATATTCCCCCAAGGTCAAGTTGCCACGCCTGCGAGCTGCGTTCGTTGAAGGAAATTaGCCACCCAAAATGGATTTC +
Preference number: 4 (lower is better)
Translates to: WMDVKYSPKVKLPRLRAAFVEGN*PPKMDF
Trigger: GAAATCCATTTTGGGTGGGCAATTTCCTTCAACGAA...CGCAGCTCGCAGGCGTGGCAACTTGACCTTGGGGGAATATTTCACATCCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 90 bp CTCCGCGCGGCGCCCCGGGGCTCTCTGGCTCATGACCCTCGCAGCTaGCGTTCGAGGCTCTCTCAGGGCTGGACCGGGCAAGCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: LRAAPRGSLAHDPRS*RSRLSQGWTGQAGS
Trigger: GCTGCCAGCTTGCCCGGTCCAGCCCTGAGAGAGCCTCGAACGCCAGCTGCGAGGGTCATGAGCCAGAGAGCCCCGGGGCGCCGCGCGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 90 bp CCACTCGGCCGCCCAGCGTTGGGAAGCGCGGGGCGCAGCAGGCGTTaGCTATGGCCACGTACGAGTCCCGCACGCGCACCACCTCGCCGT +
Preference number: 5 (lower is better)
Translates to: PLGRPALGSAGRSRR*LWPRTSPARAPPRR
Trigger: ACGGCGAGGTGGTGCGCGTGCGGGACTCGTACGTGGCCATAGCCAACGCCTGCTGCGCCCCGCGCTTCCCAACGCTGGGCGGCCGAGTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 90 bp GGCCGCCCAGCGTTGGGAAGCGCGGGGCGCAGCAGGCGTTGGCTATaGCCACGTACGAGTCCCGCACGCGCACCACCTCGCCGTCTTCAT +
Preference number: 5 (lower is better)
Translates to: GRPALGSAGRSRRWL*PRTSPARAPPRRLH
Trigger: ATGAAGACGGCGAGGTGGTGCGCGTGCGGGACTCGTACGTGGCCATAGCCAACGCCTGCTGCGCCCCGCGCTTCCCAACGCTGGGCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 90 bp GAAGGACCCGAGGATGCGGGGAACGCGATGCAAGAAGGCGAGGGCTaGGGGGCGCAAAGTCGCTATCTCCGCTTGCTCTCCGCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: EGPEDAGNAMQEGEG*GAQSRYLRLLSARR
Trigger: GCGCCGCGCGGAGAGCAAGCGGAGATAGCGACTTTGCGCCCCCCAGCCCTCGCCTTCTTGCATCGCGTTCCCCGCATCCTCGGGTCCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 90 bp CTCCCACCTGGTCCTTGGAGCCGGAGGGCGGCAGAGGAGCTCCGCTaGCTCGCTGATAATGGATGTCTCCCTCGACGGGCGCTTCAGCGC +
Preference number: 5 (lower is better)
Translates to: LPPGPWSRRAAEELR*LADNGCLPRRALQR
Trigger: GCGCTGAAGCGCCCGTCGAGGGAGACATCCATTATCAGCGAGGCAGCGGAGCTCCTCTGCCGCCCTCCGGCTCCAAGGACCAGGTGGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp CCAAGGTCAAGTTGCCACGCCTGCGAGCTGCGCCCCCTCTCCCTCCCTTCCCAATGGTGCCACAGCAGCTaGCGCCAGAGCAGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: PRSSCHACELRPLSLPSQWCHSS*RQSRRR
Trigger: CCTGCGCCTGCTCTGGCGCAAGCTGCTGTGGCACCA...TTGGGAAGGGAGGGAGAGGGGGCGCAGCTCGCAGGCGTGGCAACTTGACCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp AAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCCGGCGGGGGCTCGCCCTaGCGCCCTAGTCCTCCGCGT +
Preference number: 5 (lower is better)
Translates to: KVSGPHLEGQRTLPANAPGGGSP*RPSPPR
Trigger: ACGCGGAGGACTAGGGCGCAAGGGCGAGCCCCCGCC...GGGTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 90 bp TCAGGCGCCCGTCGCCGCTGTAGCAGGCCGGGAAAAAGGCGCGGCTaGCTTCCTGGAAGAGCGACTTCTCCAGCACCTCGACAGCGGCAA +
Preference number: 5 (lower is better)
Translates to: SGARRRCSRPGKRRG*LPGRATSPAPRQRQ
Trigger: TTGCCGCTGTCGAGGTGCTGGAGAAGTCGCTCTTCCAGGAAGGCAGCCGCGCCTTTTTCCCGGCCTGCTACAGCGGCGACGGGCGCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 90 bp CCACGTTGGACAGCTTGCTGCGGAGCAAGGTGGCCATGGCGGCGGTaGGGACAGCGGAAAGGACAGAAGGACCCGAGGATGCGGGGAACG +
Preference number: 5 (lower is better)
Translates to: PRWTACCGARWPWRR*GQRKGQKDPRMRGT
Trigger: CGTTCCCCGCATCCTCGGGTCCTTCTGTCCTTTCCGCTGTCCCCACCGCCGCCATGGCCACCTTGCTCCGCAGCAAGCTGTCCAACGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 90 bp CAGCTCGATGATCTGCGCTACGTTCACCACTCGGCCGCCCAGCGTTaGGAAGCGCGGGGCGCAGCAGGCGTTGGCTATGGCCACGTACGA +
Preference number: 5 (lower is better)
Translates to: QLDDLRYVHHSAAQR*EARGAAGVGYGHVR
Trigger: TCGTACGTGGCCATAGCCAACGCCTGCTGCGCCCCGCGCTTCCCAACGCTGGGCGGCCGAGTGGTGAACGTAGCGCAGATCATCGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp CCAAGGTCAAGTTGCCACGCCTGCGAGCTGCGCCCCCTCTCCCTCCCTTCCCAAACGGACGTGGCCACGTaGGACAGCTTGCTGCGGAGC +
Preference number: 5 (lower is better)
Translates to: PRSSCHACELRPLSLPSQTDVAT*DSLLRS
Trigger: GCTCCGCAGCAAGCTGTCCAACGTGGCCACGTCCGT...TTGGGAAGGGAGGGAGAGGGGGCGCAGCTCGCAGGCGTGGCAACTTGACCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS TCA 90 bp TCGCCCTTGCGCCCTAGTCCTCCGCGTTGGTTCGGTAGGCTTCGATaGGGCCCTCGAGGGAGTGCACGAAGCCGGACACGCTGCAGATGC +
Preference number: 5 (lower is better)
Translates to: SPLRPSPPRWFGRLR*GPRGSARSRTRCRC
Trigger: GCATCTGCAGCGTGTCCGGCTTCGTGCACTCCCTCGAGGGCCTCATCGAAGCCTACCGAACCAACGCGGAGGACTAGGGCGCAAGGGCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 90 bp GGCTCTCCCTCGGCTTTCAGGATGTCCATCTGCAGGCCCTGGCGGTaGTCAAAGTCGAGGTCGTCGCAATGCGCGAAGCCCACCGCCTCC +
Preference number: 5 (lower is better)
Translates to: GSPSAFRMSICRPWR*SKSRSSQCAKPTAS
Trigger: GGAGGCGGTGGGCTTCGCGCATTGCGACGACCTCGACTTTGAGCACCGCCAGGGCCTGCAGATGGACATCCTGAAAGCCGAGGGAGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 90 bp CCGCAGGGCTCTCCCTCGGCTTTCAGGATGTCCATCTGCAGGCCCTaGCGGTGCTCAAAGTCGAGGTCGTCGCAATGCGCGAAGCCCACC +
Preference number: 5 (lower is better)
Translates to: PQGSPSAFRMSICRP*RCSKSRSSQCAKPT
Trigger: GGTGGGCTTCGCGCATTGCGACGACCTCGACTTTGAGCACCGCCAGGGCCTGCAGATGGACATCCTGAAAGCCGAGGGAGAGCCCTGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp AAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCCAGTCGCTATCTCCGCTaGCTCTCCGCGCGGCGCCCC +
Preference number: 5 (lower is better)
Translates to: KVSGPHLEGQRTLPANAPSRYLR*LSARRP
Trigger: GGGGCGCCGCGCGGAGAGCAAGCGGAGATAGCGACT...GGGTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS TCA 90 bp TCGTCGCAATGCGCGAAGCCCACCGCCTCCTCATCCGTGGCCGCCTaGAAACCCATCCTGGCGAACATGCCGCTCATCTTGGCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: SSQCAKPTASSSVAA*KPILANMPLILAWD
Trigger: GTCCCAGGCCAAGATGAGCGGCATGTTCGCCAGGATGGGTTTTCAGGCGGCCACGGATGAGGAGGCGGTGGGCTTCGCGCATTGCGACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS TCA 90 bp AAGAAGACTTGGTGCCACAGCAGCTTGCGCCAGAGCAGGCGCAGGTaGAAGAGGCTGGGCAGCAAGAAACAGAGGCCGGCGCCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: KKTWCHSSLRQSRRR*KRLGSKKQRPAPVR
Trigger: CCTCACGGGCGCCGGCCTCTGTTTCTTGCTGCCCAGCCTCTTTCACCTGCGCCTGCTCTGGCGCAAGCTGCTGTGGCACCAAGTCTTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 90 bp CCGCCTCCTCATCCGTGGCCGCCTGAAAACCCATCCTGGCGAACATaGCGCTCATCTTGGCCTGGGACTTGTTGGACACGGACGTGGCCA +
Preference number: 5 (lower is better)
Translates to: PPPHPWPPENPSWRT*RSSWPGTCWTRTWP
Trigger: TGGCCACGTCCGTGTCCAACAAGTCCCAGGCCAAGATGAGCGGCATGTTCGCCAGGATGGGTTTTCAGGCGGCCACGGATGAGGAGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 90 bp CTCACCACCACGTACAGGATGCACGTCATCACCAGCTCGATGATCTaGGCTACGTTCACCACTCGGCCGCCCAGCGTTGGGAAGCGCGGG +
Preference number: 5 (lower is better)
Translates to: LTTTYRMHVITSSMI*ATFTTRPPSVGKRG
Trigger: CCCGCGCTTCCCAACGCTGGGCGGCCGAGTGGTGAACGTAGCGCAGATCATCGAGCTGGTGATGACGTGCATCCTGTACGTGGTGGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 90 bp GCGCAAGGCAGCAGCACGGCCGTGGCGATAATGGACCAGGACTTCTaGGACACGGGCAGCCCCGGGAAGCTGTTGTACATGAGGTTGCCA +
Preference number: 5 (lower is better)
Translates to: AQGSSTAVAIMDQDF*DTGSPGKLLYMRLP
Trigger: TGGCAACCTCATGTACAACAGCTTCCCGGGGCTGCCCGTGTCGCAGAAGTCCTGGTCCATTATCGCCACGGCCGTGCTGCTGCCTTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 90 bp GGTGAGGTAGGCGACGAGCGCGAAGAGGCCCTTGAGCACGCAGGCTaGGATGTGCGTCCAGTTCATCATGCAGTGGAACTCGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: GEVGDEREEALEHAG*DVRPVHHAVELAGL
Trigger: CAGCCCAGCGAGTTCCACTGCATGATGAACTGGACGCACATCGCAGCCTGCGTGCTCAAGGGCCTCTTCGCGCTCGTCGCCTACCTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 90 bp CGAACATGCCGCTCATCTTGGCCTGGGACTTGTTGGACACGGACGTaGCCACGTTGGACAGCTTGCTGCGGAGCAAGGTGGCCATGGCGG +
Preference number: 5 (lower is better)
Translates to: RTCRSSWPGTCWTRT*PRWTACCGARWPWR
Trigger: CCGCCATGGCCACCTTGCTCCGCAGCAAGCTGTCCAACGTGGCCACGTCCGTGTCCAACAAGTCCCAGGCCAAGATGAGCGGCATGTTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 90 bp CGAAGCCCACCGCCTCCTCATCCGTGGCCGCCTGAAAACCCATCCTaGCGAACATGCCGCTCATCTTGGCCTGGGACTTGTTGGACACGG +
Preference number: 5 (lower is better)
Translates to: RSPPPPHPWPPENPS*RTCRSSWPGTCWTR
Trigger: CCGTGTCCAACAAGTCCCAGGCCAAGATGAGCGGCATGTTCGCCAGGATGGGTTTTCAGGCGGCCACGGATGAGGAGGCGGTGGGCTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 90 bp AGTCGAGGTCGTCGCAATGCGCGAAGCCCACCGCCTCCTCATCCGTaGCCGCCTGAAAACCCATCCTGGCGAACATGCCGCTCATCTTGG +
Preference number: 5 (lower is better)
Translates to: SRGRRNARSPPPPHP*PPENPSWRTCRSSW
Trigger: CCAAGATGAGCGGCATGTTCGCCAGGATGGGTTTTCAGGCGGCCACGGATGAGGAGGCGGTGGGCTTCGCGCATTGCGACGACCTCGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp CCAAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACGCCACGTTGGACAGCTaGCTGCGGAGCAAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: PKCRGPTWKDREPCPQMHATLDS*LRSKVA
Trigger: GGCCACCTTGCTCCGCAGCAAGCTGTCCAACGTGGC...GTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp AAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCCAGCGCGAAGAGGCCCTaGAGCACGCAGGCTGCGATG +
Preference number: 5 (lower is better)
Translates to: KVSGPHLEGQRTLPANAPSAKRP*STQAAM
Trigger: CATCGCAGCCTGCGTGCTCAAGGGCCTCTTCGCGCT...GGGTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp CCAAGGTCAAGTTGCCACGCCTGCGAGCTGCGCCCCCTCTCCCTCCCTTCCCAAGACGTCGAAGAAGACTaGGTGCCACAGCAGCTTGCG +
Preference number: 5 (lower is better)
Translates to: PRSSCHACELRPLSLPSQDVEED*VPQQLA
Trigger: CGCAAGCTGCTGTGGCACCAAGTCTTCTTCGACGTC...TTGGGAAGGGAGGGAGAGGGGGCGCAGCTCGCAGGCGTGGCAACTTGACCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS TCA 90 bp CCTCGAGGGAGTGCACGAAGCCGGACACGCTGCAGATGCCGCCGATaGCGAAGATGGCGACGTCGAAGAAGACTTGGTGCCACAGCAGCT +
Preference number: 5 (lower is better)
Translates to: PRGSARSRTRCRCRR*RRWRRRRRLGATAA
Trigger: AGCTGCTGTGGCACCAAGTCTTCTTCGACGTCGCCATCTTCGTCATCGGCGGCATCTGCAGCGTGTCCGGCTTCGTGCACTCCCTCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 90 bp CCGTGGCCGCCTGAAAACCCATCCTGGCGAACATGCCGCTCATCTTaGCCTGGGACTTGTTGGACACGGACGTGGCCACGTTGGACAGCT +
Preference number: 5 (lower is better)
Translates to: PWPPENPSWRTCRSS*PGTCWTRTWPRWTA
Trigger: AGCTGTCCAACGTGGCCACGTCCGTGTCCAACAAGTCCCAGGCCAAGATGAGCGGCATGTTCGCCAGGATGGGTTTTCAGGCGGCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp CGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGGATGTGCCTCCCACCTGGTCCTaGGAGCCGGAGGGCGGCAGA +
Preference number: 5 (lower is better)
Translates to: RSCWKWLDAVDSELWMDVPPTWS*EPEGGR
Trigger: TCTGCCGCCCTCCGGCTCCAAGGACCAGGTGGGAGG...CACATCCATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp AGGAACCAGAGATGTTTAAAGCTTGGCCTCCCAAGCGCGGCGGCAGGGCGCACTCTGGGCTGCTGCATATaGCCCTCCAGCGAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: RNQRCLKLGLPSAAAGRTLGCCI*PSSEGR
Trigger: CCTGCCTTCGCTGGAGGGCAATATGCAGCAGCCCAG...AGTGCGCCCTGCCGCCGCGCTTGGGAGGCCAAGCTTTAAACATCTCTGGTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS TCA 90 bp TGCCACTCACCACCACGTACAGGATGCACGTCATCACCAGCTCGATaGTCTGCGCTACGTTCACCACTCGGCCGCCCAGCGTTGGGAAGC +
Preference number: 5 (lower is better)
Translates to: CHSPPRTGCTSSPAR*SALRSPLGRPALGS
Trigger: GCTTCCCAACGCTGGGCGGCCGAGTGGTGAACGTAGCGCAGATCATCGAGCTGGTGATGACGTGCATCCTGTACGTGGTGGTGAGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 90 bp AACCCATCCTGGCGAACATGCCGCTCATCTTGGCCTGGGACTTGTTaGACACGGACGTGGCCACGTTGGACAGCTTGCTGCGGAGCAAGG +
Preference number: 5 (lower is better)
Translates to: NPSWRTCRSSWPGTC*TRTWPRWTACCGAR
Trigger: CCTTGCTCCGCAGCAAGCTGTCCAACGTGGCCACGTCCGTGTCCAACAAGTCCCAGGCCAAGATGAGCGGCATGTTCGCCAGGATGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 90 bp CCCTTGAGCACGCAGGCTGCGATGTGCGTCCAGTTCATCATGCAGTaGAACTCGCTGGGCTGCTGCATATTGCCCTCCAGCGAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: PLSTQAAMCVQFIMQ*NSLGCCILPSSEGR
Trigger: CCTGCCTTCGCTGGAGGGCAATATGCAGCAGCCCAGCGAGTTCCACTGCATGATGAACTGGACGCACATCGCAGCCTGCGTGCTCAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp CAGTCAGCCTTTCCCGCTGCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTTTGGCCTGGGACTTGTaGGACACGGACGTGGCCACG +
Preference number: 5 (lower is better)
Translates to: QSAFPAAGLKRLRNGKRSLAWDL*DTDVAT
Trigger: CGTGGCCACGTCCGTGTCCAACAAGTCCCAGGCCAA...AGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCGGGAAAGGCTGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp GGGAAGCGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGTCCCACGCCGTGATTTaGGGCTTGTCGTGGCCCCCG +
Preference number: 5 (lower is better)
Translates to: GKRSCWKWLDAVDSELWMSHAVI*GLSWPP
Trigger: CGGGGGCCACGACAAGCCCAAAATCACGGCGTGGGA...CATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp CGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGGATGTGGGGGCGCAGCAGGCGTaGGCTATGGCCACGTACGAG +
Preference number: 5 (lower is better)
Translates to: RSCWKWLDAVDSELWMDVGAQQA*AMATYE
Trigger: CTCGTACGTGGCCATAGCCAACGCCTGCTGCGCCCC...CACATCCATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp GGGAAGCGCTCTTGCTGGAAATGGCTGGACGCTGTAGATTCCGAGCTCTGGATGTCCCCCAAGGTCAAGTaGCCACGCCTGCGAGCTGCG +
Preference number: 5 (lower is better)
Translates to: GKRSCWKWLDAVDSELWMSPKVK*PRLRAA
Trigger: CGCAGCTCGCAGGCGTGGCAACTTGACCTTGGGGGA...CATCCAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp GACTGGAACCAAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCGAATGGGAAGCGCTCTaGCTGGAAATGGCTGGACGC +
Preference number: 5 (lower is better)
Translates to: DWNQSVGAPLGRTENPAREWEAL*LEMAGR
Trigger: GCGTCCAGCCATTTCCAGCAAGAGCGCTTCCCATTC...GCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTTGGTTCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp CCAAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACAGCCCCGGGAAGCTGTaGTACATGAGGTTGCCACTC +
Preference number: 5 (lower is better)
Translates to: PKCRGPTWKDREPCPQMHSPGKL*YMRLPL
Trigger: GAGTGGCAACCTCATGTACAACAGCTTCCCGGGGCT...GTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp AAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCCCGCCTTCCGGCTTCGTaGAAGGAAATTGCCCACCCA +
Preference number: 5 (lower is better)
Translates to: KVSGPHLEGQRTLPANAPRLPAS*KEIAHP
Trigger: TGGGTGGGCAATTTCCTTCAACGAAGCCGGAAGGCG...GGGTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS TCA 90 bp ACCAGGACTTCTGCGACACGGGCAGCCCCGGGAAGCTGTTGTACATaGGGTTGCCACTCACCACCACGTACAGGATGCACGTCATCACCA +
Preference number: 5 (lower is better)
Translates to: TRTSATRAAPGSCCT*GCHSPPRTGCTSSP
Trigger: TGGTGATGACGTGCATCCTGTACGTGGTGGTGAGTGGCAACCTCATGTACAACAGCTTCCCGGGGCTGCCCGTGTCGCAGAAGTCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 90 bp CGCAGGCTGCGATGTGCGTCCAGTTCATCATGCAGTGGAACTCGCTaGGCTGCTGCATATTGCCCTCCAGCGAAGGCAGGAAGATCTGAG +
Preference number: 5 (lower is better)
Translates to: RRLRCASSSSCSGTR*AAAYCPPAKAGRSE
Trigger: CTCAGATCTTCCTGCCTTCGCTGGAGGGCAATATGCAGCAGCCCAGCGAGTTCCACTGCATGATGAACTGGACGCACATCGCAGCCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp TGGATGGATGTGAAATATTCCCCCAAGGTCAAGTTGCCACGCCTGCGAGCTGCGATGCCCTGGATGGCGTaGGTCACGTTCCAGCCTGCC +
Preference number: 5 (lower is better)
Translates to: WMDVKYSPKVKLPRLRAAMPWMA*VTFQPA
Trigger: GGCAGGCTGGAACGTGACCAACGCCATCCAGGGCAT...CGCAGCTCGCAGGCGTGGCAACTTGACCTTGGGGGAATATTTCACATCCATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp CGCTGCAGGGTTGAAACGTCTCCGGAATGGGAAGCGCTCTTGCTGGAAATGGCTGCCACCAGAAAGATGTaGACCACGGCGCGGATGGAG +
Preference number: 5 (lower is better)
Translates to: RCRVETSPEWEALLLEMAATRKM*TTARME
Trigger: CTCCATCCGCGCCGTGGTCAACATCTTTCTGGTGGC...AGCCATTTCCAGCAAGAGCGCTTCCCATTCCGGAGACGTTTCAACCCTGCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp AGGAACCAGAGATGTTTAAAGCTTGGCCTCCCAAGCGCGGCGGCAGGGCGCACTCTGTTGTACATGAGGTaGCCACTCACCACCACGTAC +
Preference number: 5 (lower is better)
Translates to: RNQRCLKLGLPSAAAGRTLLYMR*PLTTTY
Trigger: GTACGTGGTGGTGAGTGGCAACCTCATGTACAACAG...AGTGCGCCCTGCCGCCGCGCTTGGGAGGCCAAGCTTTAAACATCTCTGGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp AAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCAAATGCACCCAACTTGGACACGGCCTaGAGGTTCTTAAGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: KVSGPHLEGQRTLPANAPNLDTA*RFLRKA
Trigger: CGCCTTCCTTAAGAACCTCAAGGCCGTGTCCAAGTT...GGGTGCATTTGCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp GCGGCTTCTCGCCTTCCGGCTTCGTTGAAGGAAATTGCCCACCCAAAATGGATTTCCGTGATGACCTCCTaGGTCTCGTCGGCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: AASRLPASLKEIAHPKWISVMTS*VSSAQV
Trigger: CACCTGGGCCGACGAGACCAAGGAGGTCATCACGGA...AATCCATTTTGGGTGGGCAATTTCCTTCAACGAAGCCGGAAGGCGAGAAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp GCGGCTTCTCGCCTTCCGGCTTCGTTGAAGGAAATTGCCCACCCAAAATGGATTGTGTCGGGGCCCCACTaGGAAGGACAGAGAACCCTG +
Preference number: 5 (lower is better)
Translates to: AASRLPASLKEIAHPKWIVSGPH*EGQRTL
Trigger: CAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACAC...AATCCATTTTGGGTGGGCAATTTCCTTCAACGAAGCCGGAAGGCGAGAAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp GGAAATTGCCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTATCTTGGCCTGGGACTaGTTGGACACGGACGTGGCC +
Preference number: 5 (lower is better)
Translates to: GNCPPKMDFPVSLSRCRVILAWD*LDTDVA
Trigger: GGCCACGTCCGTGTCCAACAAGTCCCAGGCCAAGAT...AACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp GACTGGAACCAAAGTGTCGGGGCCCCACTTGGAAGGACAGAGAACCCTGCCCGCCCCAAAACCAGGGTGTaGTGGAAAAGAAAGGACAAC +
Preference number: 5 (lower is better)
Translates to: DWNQSVGAPLGRTENPARPKTRV*WKRKDN
Trigger: GTTGTCCTTTCTTTTCCACAACACCCTGGTTTTGGG...GCGGGCAGGGTTCTCTGTCCTTCCAAGTGGGGCCCCGACACTTTGGTTCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp GGAAAAGAAAGGACAACAGAAACGCAGACGCGATGGATCGTGAATCCCTGTCCCGCCGTGATTTTGGGCTaGTCGTGGCCCCCGAATTCG +
Preference number: 5 (lower is better)
Translates to: GKERTTETQTRWIVNPCPAVILG*SWPPNS
Trigger: CGAATTCGGGGGCCACGACAAGCCCAAAATCACGGC...GGGACAGGGATTCACGATCCATCGCGTCTGCGTTTCTGTTGTCCTTTCTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp GAGCTCTGGATGGATGTGAAATATTCCCCCAAGGTCAAGTTGCCACGCCTGCGATTTCCCGCTGCAGGGTaGAAACGTCTCCGGAATGGG +
Preference number: 5 (lower is better)
Translates to: ELWMDVKYSPKVKLPRLRFPAAG*KRLRNG
Trigger: CCCATTCCGGAGACGTTTCAACCCTGCAGCGGGAAA...TCGCAGGCGTGGCAACTTGACCTTGGGGGAATATTTCACATCCATCCAGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 90 bp TTCCTGGAAGAGCGACTTCTCCAGCACCTCGACAGCGGCAAAGAATaGCAGAGGATAGGACAACAGCGCCTTGGCCACCAGAAAGATGTT +
Preference number: 5 (lower is better)
Translates to: FLEERLLQHLDSGKE*QRIGQQRLGHQKDV
Trigger: AACATCTTTCTGGTGGCCAAGGCGCTGTTGTCCTATCCTCTGCCATTCTTTGCCGCTGTCGAGGTGCTGGAGAAGTCGCTCTTCCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp GAAATTGCCCACCCAAAATGGATTTCCCAGTCAGCCTTTCCCGCTGCAGGGTTGAACATGCCGCTCATCTaGGCCTGGGACTTGTTGGAC +
Preference number: 5 (lower is better)
Translates to: EIAHPKWISQSAFPAAGLNMPLI*AWDLLD
Trigger: GTCCAACAAGTCCCAGGCCAAGATGAGCGGCATGTT...CAACCCTGCAGCGGGAAAGGCTGACTGGGAAATCCATTTTGGGTGGGCAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp GGAAAAGAAAGGACAACAGAAACGCAGACGCGATGGATCGTGAATCCCTGTCCCCACAGCAGACTGAACTaGGACACGGCCTTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: GKERTTETQTRWIVNPCPHSRLN*DTALRF
Trigger: GAACCTCAAGGCCGTGTCCAAGTTCAGTCTGCTGTG...GGGACAGGGATTCACGATCCATCGCGTCTGCGTTTCTGTTGTCCTTTCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS-3UTR CAA 90 bp TTTCATCTTATTCACCACGAGCACACCACACGCACAGTAGAACAGTTCCACACCGCTATGACCAGGATATaGATGACGAAGTGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: FHLIHHEHTTRTVEQFHTAMTRI*MTKWAR
Trigger: TCTGGCCCACTTCGTCATCAATATCCTGGTCATAGC...GGTGTGGAACTGTTCTACTGTGCGTGTGGTGTGCTCGTGGTGAATAAGATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CAA 72 bp CCGCCCAGCGTTGGGAAGCGCGGGGCGCAGCAGGCGTaGGCTATGGCCACGTACGAGTCCCGCACGCGCACC +
Preference number: 6 (lower is better)
Translates to: PPSVGKRGAQQA*AMATYESRTRT
Trigger: GGTGCGCGTGCGGGACTCGTACGTGGCCATAGCCAACGCCTGCTGCGCCCCGCGCTTCCCAACGCTGGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CAA 90 bp ACCACTCGGCCGCCCAGCGTTGGGAAGCGCGGGGCGCAGCAGGCGTaGGCTATGGCCACGTACGAGTCCCGCACGCGCACCACCTCGCCG +
Preference number: 6 (lower is better)
Translates to: TTRPPSVGKRGAQQA*AMATYESRTRTTSP
Trigger: CGGCGAGGTGGTGCGCGTGCGGGACTCGTACGTGGCCATAGCCAACGCCTGCTGCGCCCCGCGCTTCCCAACGCTGGGCGGCCGAGTGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS TCA 72 bp TGCTCTCCGCGCGGCGCCCCGGGGCTCTCTGGCTCATaGCCCTCGCAGCTGGCGTTCGAGGCTCTCTCAGGG +
Preference number: 6 (lower is better)
Translates to: CSPRGAPGLSGS*PSQLAFEALSG
Trigger: CCCTGAGAGAGCCTCGAACGCCAGCTGCGAGGGTCATGAGCCAGAGAGCCCCGGGGCGCCGCGCGGAGAGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp GCGTTGGGAAGCGCGGGGCGCAGCAGGCGTTGGCTATaGCCACGTACGAGTCCCGCACGCGCACCACCTCGC +
Preference number: 6 (lower is better)
Translates to: ALGSAGRSRRWL*PRTSPARAPPR
Trigger: GCGAGGTGGTGCGCGTGCGGGACTCGTACGTGGCCATAGCCAACGCCTGCTGCGCCCCGCGCTTCCCAACGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp CGCCCAGCGTTGGGAAGCGCGGGGCGCAGCAGGCGTTaGCTATGGCCACGTACGAGTCCCGCACGCGCACCA +
Preference number: 6 (lower is better)
Translates to: RPALGSAGRSRR*LWPRTSPARAP
Trigger: TGGTGCGCGTGCGGGACTCGTACGTGGCCATAGCCAACGCCTGCTGCGCCCCGCGCTTCCCAACGCTGGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 72 bp GGGAGAGAGCGCAGAAGCGCGGCGGGGGCTCGCCCTTaGGCCCTAGTCCTCCGCGTTGGTTCGGTAGGCTTC +
Preference number: 6 (lower is better)
Translates to: GRERRSAAGARP*ALVLRVGSVGF
Trigger: GAAGCCTACCGAACCAACGCGGAGGACTAGGGCGCAAGGGCGAGCCCCCGCCGCGCTTCTGCGCTCTCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp GCGCCCCGGGGCTCTCTGGCTCATGACCCTCGCAGCTaGCGTTCGAGGCTCTCTCAGGGCTGGACCGGGCAA +
Preference number: 6 (lower is better)
Translates to: APRGSLAHDPRS*RSRLSQGWTGQ
Trigger: TTGCCCGGTCCAGCCCTGAGAGAGCCTCGAACGCCAGCTGCGAGGGTCATGAGCCAGAGAGCCCCGGGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 72 bp AGGCCCTGGCGGTGCTCAAAGTCGAGGTCGTCGCAATaGGCGAAGCCCACCGCCTCCTCATCCGTGGCCGCC +
Preference number: 6 (lower is better)
Translates to: RPWRCSKSRSSQ*AKPTASSSVAA
Trigger: GGCGGCCACGGATGAGGAGGCGGTGGGCTTCGCGCATTGCGACGACCTCGACTTTGAGCACCGCCAGGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp GATCTGCGCTACGTTCACCACTCGGCCGCCCAGCGTTaGGAAGCGCGGGGCGCAGCAGGCGTTGGCTATGGC +
Preference number: 6 (lower is better)
Translates to: DLRYVHHSAAQR*EARGAAGVGYG
Trigger: GCCATAGCCAACGCCTGCTGCGCCCCGCGCTTCCCAACGCTGGGCGGCCGAGTGGTGAACGTAGCGCAGATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CAA 72 bp AGGGAGAGAGCGCAGAAGCGCGGCGGGGGCTCGCCCTaGCGCCCTAGTCCTCCGCGTTGGTTCGGTAGGCTT +
Preference number: 6 (lower is better)
Translates to: RERAQKRGGGSP*RPSPPRWFGRL
Trigger: AAGCCTACCGAACCAACGCGGAGGACTAGGGCGCAAGGGCGAGCCCCCGCCGCGCTTCTGCGCTCTCTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 72 bp GGTCCTTGGAGCCGGAGGGCGGCAGAGGAGCTCCGCTaGCTCGCTGATAATGGATGTCTCCCTCGACGGGCG +
Preference number: 6 (lower is better)
Translates to: GPWSRRAAEELR*LADNGCLPRRA
Trigger: CGCCCGTCGAGGGAGACATCCATTATCAGCGAGGCAGCGGAGCTCCTCTGCCGCCCTCCGGCTCCAAGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS TCA 72 bp CGCCCTAGTCCTCCGCGTTGGTTCGGTAGGCTTCGATaGGGCCCTCGAGGGAGTGCACGAAGCCGGACACGC +
Preference number: 6 (lower is better)
Translates to: RPSPPRWFGRLR*GPRGSARSRTR
Trigger: GCGTGTCCGGCTTCGTGCACTCCCTCGAGGGCCTCATCGAAGCCTACCGAACCAACGCGGAGGACTAGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 72 bp GGTGGGGACAGCGGAAAGGACAGAAGGACCCGAGGATaGGGGGAACGCGATGCAAGAAGGCGAGGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: GGDSGKDRRTRG*GERDARRRGLG
Trigger: CCCCAGCCCTCGCCTTCTTGCATCGCGTTCCCCGCATCCTCGGGTCCTTCTGTCCTTTCCGCTGTCCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp CGTCGCAATGCGCGAAGCCCACCGCCTCCTCATCCGTaGCCGCCTGAAAACCCATCCTGGCGAACATGCCGC +
Preference number: 6 (lower is better)
Translates to: RRNARSPPPPHP*PPENPSWRTCR
Trigger: GCGGCATGTTCGCCAGGATGGGTTTTCAGGCGGCCACGGATGAGGAGGCGGTGGGCTTCGCGCATTGCGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp CAGCCTGCCTCCCACGCCGTGATTTTGGGCTTGTCGTaGCCCCCGAATTCGCCACCACCTCCCACCTGGTCC +
Preference number: 6 (lower is better)
Translates to: QPASHAVILGLS*PPNSPPPPTWS
Trigger: GGACCAGGTGGGAGGTGGTGGCGAATTCGGGGGCCACGACAAGCCCAAAATCACGGCGTGGGAGGCAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 72 bp CGTCGCCGCTGTAGCAGGCCGGGAAAAAGGCGCGGCTaGCTTCCTGGAAGAGCGACTTCTCCAGCACCTCGA +
Preference number: 6 (lower is better)
Translates to: RRRCSRPGKRRG*LPGRATSPAPR
Trigger: TCGAGGTGCTGGAGAAGTCGCTCTTCCAGGAAGGCAGCCGCGCCTTTTTCCCGGCCTGCTACAGCGGCGACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp GAGGATGCGGGGAACGCGATGCAAGAAGGCGAGGGCTaGGGGGCGCAAAGTCGCTATCTCCGCTTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: EDAGNAMQEGEG*GAQSRYLRLLS
Trigger: GGAGAGCAAGCGGAGATAGCGACTTTGCGCCCCCCAGCCCTCGCCTTCTTGCATCGCGTTCCCCGCATCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp ACAGCTTGCTGCGGAGCAAGGTGGCCATGGCGGCGGTaGGGACAGCGGAAAGGACAGAAGGACCCGAGGATG +
Preference number: 6 (lower is better)
Translates to: TACCGARWPWRR*GQRKGQKDPRM
Trigger: CATCCTCGGGTCCTTCTGTCCTTTCCGCTGTCCCCACCGCCGCCATGGCCACCTTGCTCCGCAGCAAGCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp TGGCCTGGGACTTGTTGGACACGGACGTGGCCACGTTaGACAGCTTGCTGCGGAGCAAGGTGGCCATGGCGG +
Preference number: 6 (lower is better)
Translates to: WPGTCWTRTWPR*TACCGARWPWR
Trigger: CCGCCATGGCCACCTTGCTCCGCAGCAAGCTGTCCAACGTGGCCACGTCCGTGTCCAACAAGTCCCAGGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CAA 90 bp GCGTTGGTCACGTTCCAGCCTGCCTCCCACGCCGTGATTTTGGGCTaGTCGTGGCCCCCGAATTCGCCACCACCTCCCACCTGGTCCTTG +
Preference number: 6 (lower is better)
Translates to: ALVTFQPASHAVILG*SWPPNSPPPPTWSL
Trigger: CAAGGACCAGGTGGGAGGTGGTGGCGAATTCGGGGGCCACGACAAGCCCAAAATCACGGCGTGGGAGGCAGGCTGGAACGTGACCAACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS TCA 72 bp TGCGCGAAGCCCACCGCCTCCTCATCCGTGGCCGCCTaGAAACCCATCCTGGCGAACATGCCGCTCATCTTG +
Preference number: 6 (lower is better)
Translates to: CAKPTASSSVAA*KPILANMPLIL
Trigger: CAAGATGAGCGGCATGTTCGCCAGGATGGGTTTTCAGGCGGCCACGGATGAGGAGGCGGTGGGCTTCGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS TCA 72 bp TGGCGTTGGTCACGTTCCAGCCTGCCTCCCACGCCGTaGTTTTGGGCTTGTCGTGGCCCCCGAATTCGCCAC +
Preference number: 6 (lower is better)
Translates to: WRWSRSSLPPTP*FWACRGPRIRH
Trigger: GTGGCGAATTCGGGGGCCACGACAAGCCCAAAATCACGGCGTGGGAGGCAGGCTGGAACGTGACCAACGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp CCGCCGATGACGAAGATGGCGACGTCGAAGAAGACTTaGTGCCACAGCAGCTTGCGCCAGAGCAGGCGCAGG +
Preference number: 6 (lower is better)
Translates to: PPMTKMATSKKT*CHSSLRQSRRR
Trigger: CCTGCGCCTGCTCTGGCGCAAGCTGCTGTGGCACCAAGTCTTCTTCGACGTCGCCATCTTCGTCATCGGCGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CAA 72 bp TTGGCCTGGGACTTGTTGGACACGGACGTGGCCACGTaGGACAGCTTGCTGCGGAGCAAGGTGGCCATGGCG +
Preference number: 6 (lower is better)
Translates to: LAWDLLDTDVAT*DSLLRSKVAMA
Trigger: CGCCATGGCCACCTTGCTCCGCAGCAAGCTGTCCAACGTGGCCACGTCCGTGTCCAACAAGTCCCAGGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS TCA 72 bp CCACCACGTACAGGATGCACGTCATCACCAGCTCGATaGTCTGCGCTACGTTCACCACTCGGCCGCCCAGCG +
Preference number: 6 (lower is better)
Translates to: PPRTGCTSSPAR*SALRSPLGRPA
Trigger: CGCTGGGCGGCCGAGTGGTGAACGTAGCGCAGATCATCGAGCTGGTGATGACGTGCATCCTGTACGTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 72 bp TCGGCTTTCAGGATGTCCATCTGCAGGCCCTGGCGGTaGTCAAAGTCGAGGTCGTCGCAATGCGCGAAGCCC +
Preference number: 6 (lower is better)
Translates to: SAFRMSICRPWR*SKSRSSQCAKP
Trigger: GGGCTTCGCGCATTGCGACGACCTCGACTTTGAGCACCGCCAGGGCCTGCAGATGGACATCCTGAAAGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 72 bp GAACATGCCCTGGATGGCGTTGGTCACGTTCCAGCCTaGCTCCCACGCCGTGATTTTGGGCTTGTCGTGGCC +
Preference number: 6 (lower is better)
Translates to: EHALDGVGHVPA*LPRRDFGLVVA
Trigger: GGCCACGACAAGCCCAAAATCACGGCGTGGGAGGCAGGCTGGAACGTGACCAACGCCATCCAGGGCATGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 72 bp AGCAGCACGGCCGTGGCGATAATGGACCAGGACTTCTaGGACACGGGCAGCCCCGGGAAGCTGTTGTACATG +
Preference number: 6 (lower is better)
Translates to: SSTAVAIMDQDF*DTGSPGKLLYM
Trigger: CATGTACAACAGCTTCCCGGGGCTGCCCGTGTCGCAGAAGTCCTGGTCCATTATCGCCACGGCCGTGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 72 bp AGCGCGAAGAGGCCCTTGAGCACGCAGGCTGCGATGTaGGTCCAGTTCATCATGCAGTGGAACTCGCTGGGC +
Preference number: 6 (lower is better)
Translates to: SAKRPLSTQAAM*VQFIMQWNSLG
Trigger: GCCCAGCGAGTTCCACTGCATGATGAACTGGACGCACATCGCAGCCTGCGTGCTCAAGGGCCTCTTCGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 72 bp GGCGACGAGCGCGAAGAGGCCCTTGAGCACGCAGGCTaGGATGTGCGTCCAGTTCATCATGCAGTGGAACTC +
Preference number: 6 (lower is better)
Translates to: GDEREEALEHAG*DVRPVHHAVEL
Trigger: GAGTTCCACTGCATGATGAACTGGACGCACATCGCAGCCTGCGTGCTCAAGGGCCTCTTCGCGCTCGTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp CGCTCATCTTGGCCTGGGACTTGTTGGACACGGACGTaGCCACGTTGGACAGCTTGCTGCGGAGCAAGGTGG +
Preference number: 6 (lower is better)
Translates to: RSSWPGTCWTRT*PRWTACCGARW
Trigger: CCACCTTGCTCCGCAGCAAGCTGTCCAACGTGGCCACGTCCGTGTCCAACAAGTCCCAGGCCAAGATGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp CCGCCTCCTCATCCGTGGCCGCCTGAAAACCCATCCTaGCGAACATGCCGCTCATCTTGGCCTGGGACTTGT +
Preference number: 6 (lower is better)
Translates to: PPPHPWPPENPS*RTCRSSWPGTC
Trigger: ACAAGTCCCAGGCCAAGATGAGCGGCATGTTCGCCAGGATGGGTTTTCAGGCGGCCACGGATGAGGAGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp TCTCCCTCGGCTTTCAGGATGTCCATCTGCAGGCCCTaGCGGTGCTCAAAGTCGAGGTCGTCGCAATGCGCG +
Preference number: 6 (lower is better)
Translates to: SPSAFRMSICRP*RCSKSRSSQCA
Trigger: CGCGCATTGCGACGACCTCGACTTTGAGCACCGCCAGGGCCTGCAGATGGACATCCTGAAAGCCGAGGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CAA 72 bp TTGGTCACGTTCCAGCCTGCCTCCCACGCCGTGATTTaGGGCTTGTCGTGGCCCCCGAATTCGCCACCACCT +
Preference number: 6 (lower is better)
Translates to: LVTFQPASHAVI*GLSWPPNSPPP
Trigger: AGGTGGTGGCGAATTCGGGGGCCACGACAAGCCCAAAATCACGGCGTGGGAGGCAGGCTGGAACGTGACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS TCA 72 bp CCTCGCCGTCTTCATTCTCCTCGTACAGGCACGCGATaGGGATCTTGCCGGTGTAGCAGCACACAACGGCGG +
Preference number: 6 (lower is better)
Translates to: PRRLHSPRTGTR*GSCRCSSTQRR
Trigger: CCGCCGTTGTGTGCTGCTACACCGGCAAGATCCTCATCGCGTGCCTGTACGAGGAGAATGAAGACGGCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS TCA 72 bp TCTGCGACACGGGCAGCCCCGGGAAGCTGTTGTACATaGGGTTGCCACTCACCACCACGTACAGGATGCACG +
Preference number: 6 (lower is better)
Translates to: SATRAAPGSCCT*GCHSPPRTGCT
Trigger: CGTGCATCCTGTACGTGGTGGTGAGTGGCAACCTCATGTACAACAGCTTCCCGGGGCTGCCCGTGTCGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS TCA 72 bp GATAGGACAACAGCGCCTTGGCCACCAGAAAGATGTTaGCCACGGCGCGGATGGAGCCGGGCAGGTTATCCG +
Preference number: 6 (lower is better)
Translates to: DRTTAPWPPERC*PRRGWSRAGYP
Trigger: CGGATAACCTGCCCGGCTCCATCCGCGCCGTGGTCAACATCTTTCTGGTGGCCAAGGCGCTGTTGTCCTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS TCA 72 bp AGTGCACGAAGCCGGACACGCTGCAGATGCCGCCGATaGCGAAGATGGCGACGTCGAAGAAGACTTGGTGCC +
Preference number: 6 (lower is better)
Translates to: SARSRTRCRCRR*RRWRRRRRLGA
Trigger: GGCACCAAGTCTTCTTCGACGTCGCCATCTTCGTCATCGGCGGCATCTGCAGCGTGTCCGGCTTCGTGCACT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 72 bp CATCCGTGGCCGCCTGAAAACCCATCCTGGCGAACATaGCGCTCATCTTGGCCTGGGACTTGTTGGACACGG +
Preference number: 6 (lower is better)
Translates to: HPWPPENPSWRT*RSSWPGTCWTR
Trigger: CCGTGTCCAACAAGTCCCAGGCCAAGATGAGCGGCATGTTCGCCAGGATGGGTTTTCAGGCGGCCACGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 72 bp ACGTACAGGATGCACGTCATCACCAGCTCGATGATCTaGGCTACGTTCACCACTCGGCCGCCCAGCGTTGGG +
Preference number: 6 (lower is better)
Translates to: TYRMHVITSSMI*ATFTTRPPSVG
Trigger: CCCAACGCTGGGCGGCCGAGTGGTGAACGTAGCGCAGATCATCGAGCTGGTGATGACGTGCATCCTGTACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp TGGCGAACATGCCGCTCATCTTGGCCTGGGACTTGTTaGACACGGACGTGGCCACGTTGGACAGCTTGCTGC +
Preference number: 6 (lower is better)
Translates to: WRTCRSSWPGTC*TRTWPRWTACC
Trigger: GCAGCAAGCTGTCCAACGTGGCCACGTCCGTGTCCAACAAGTCCCAGGCCAAGATGAGCGGCATGTTCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CAA 72 bp CTGGCGAACATGCCGCTCATCTTGGCCTGGGACTTGTaGGACACGGACGTGGCCACGTTGGACAGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: LANMPLILAWDL*DTDVATLDSLL
Trigger: CAGCAAGCTGTCCAACGTGGCCACGTCCGTGTCCAACAAGTCCCAGGCCAAGATGAGCGGCATGTTCGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CAA 72 bp CAGGACTTCTGCGACACGGGCAGCCCCGGGAAGCTGTaGTACATGAGGTTGCCACTCACCACCACGTACAGG +
Preference number: 6 (lower is better)
Translates to: QDFCDTGSPGKL*YMRLPLTTTYR
Trigger: CCTGTACGTGGTGGTGAGTGGCAACCTCATGTACAACAGCTTCCCGGGGCTGCCCGTGTCGCAGAAGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CAA 90 bp AAACCCATCCTGGCGAACATGCCGCTCATCTTGGCCTGGGACTTGTaGGACACGGACGTGGCCACGTTGGACAGCTTGCTGCGGAGCAAG +
Preference number: 6 (lower is better)
Translates to: KPILANMPLILAWDL*DTDVATLDSLLRSK
Trigger: CTTGCTCCGCAGCAAGCTGTCCAACGTGGCCACGTCCGTGTCCAACAAGTCCCAGGCCAAGATGAGCGGCATGTTCGCCAGGATGGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp AAACCCATCCTGGCGAACATGCCGCTCATCTTGGCCTaGGACTTGTTGGACACGGACGTGGCCACGTTGGAC +
Preference number: 6 (lower is better)
Translates to: KPILANMPLILA*DLLDTDVATLD
Trigger: GTCCAACGTGGCCACGTCCGTGTCCAACAAGTCCCAGGCCAAGATGAGCGGCATGTTCGCCAGGATGGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp CCTGAAAACCCATCCTGGCGAACATGCCGCTCATCTTaGCCTGGGACTTGTTGGACACGGACGTGGCCACGT +
Preference number: 6 (lower is better)
Translates to: PENPSWRTCRSS*PGTCWTRTWPR
Trigger: ACGTGGCCACGTCCGTGTCCAACAAGTCCCAGGCCAAGATGAGCGGCATGTTCGCCAGGATGGGTTTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp ACGCAGGCTGCGATGTGCGTCCAGTTCATCATGCAGTaGAACTCGCTGGGCTGCTGCATATTGCCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: TQAAMCVQFIMQ*NSLGCCILPSS
Trigger: GCTGGAGGGCAATATGCAGCAGCCCAGCGAGTTCCACTGCATGATGAACTGGACGCACATCGCAGCCTGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp GAGCGACTTCTCCAGCACCTCGACAGCGGCAAAGAATaGCAGAGGATAGGACAACAGCGCCTTGGCCACCAG +
Preference number: 6 (lower is better)
Translates to: ERLLQHLDSGKE*QRIGQQRLGHQ
Trigger: CTGGTGGCCAAGGCGCTGTTGTCCTATCCTCTGCCATTCTTTGCCGCTGTCGAGGTGCTGGAGAAGTCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CAA 72 bp ATCCTGGCGAACATGCCGCTCATCTTGGCCTGGGACTaGTTGGACACGGACGTGGCCACGTTGGACAGCTTG +
Preference number: 6 (lower is better)
Translates to: ILANMPLILAWD*LDTDVATLDSL
Trigger: CAAGCTGTCCAACGTGGCCACGTCCGTGTCCAACAAGTCCCAGGCCAAGATGAGCGGCATGTTCGCCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CAA 90 bp ATAATGGACCAGGACTTCTGCGACACGGGCAGCCCCGGGAAGCTGTaGTACATGAGGTTGCCACTCACCACCACGTACAGGATGCACGTC +
Preference number: 6 (lower is better)
Translates to: IMDQDFCDTGSPGKL*YMRLPLTTTYRMHV
Trigger: GACGTGCATCCTGTACGTGGTGGTGAGTGGCAACCTCATGTACAACAGCTTCCCGGGGCTGCCCGTGTCGCAGAAGTCCTGGTCCATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CCA 72 bp CGATGTGCGTCCAGTTCATCATGCAGTGGAACTCGCTaGGCTGCTGCATATTGCCCTCCAGCGAAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: RCASSSSCSGTR*AAAYCPPAKAG
Trigger: TCCTGCCTTCGCTGGAGGGCAATATGCAGCAGCCCAGCGAGTTCCACTGCATGATGAACTGGACGCACATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CAA 72 bp GCCAGAGTGCACAGCAGACTGAACTTGGACACGGCCTaGAGGTTCTTAAGGAAGGCGCAAGGCAGCAGCACG +
Preference number: 6 (lower is better)
Translates to: ARVHSRLNLDTA*RFLRKAQGSST
Trigger: CGTGCTGCTGCCTTGCGCCTTCCTTAAGAACCTCAAGGCCGTGTCCAAGTTCAGTCTGCTGTGCACTCTGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 72 bp TGCGTCCAGTTCATCATGCAGTGGAACTCGCTGGGCTaGTGCATATTGCCCTCCAGCGAAGGCAGGAAGATC +
Preference number: 6 (lower is better)
Translates to: CVQFIMQWNSLG*CILPSSEGRKI
Trigger: GATCTTCCTGCCTTCGCTGGAGGGCAATATGCAGCAGCCCAGCGAGTTCCACTGCATGATGAACTGGACGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS GCA 72 bp TCATCATGCAGTGGAACTCGCTGGGCTGCTGCATATTaGCCTCCAGCGAAGGCAGGAAGATCTGAGACGTGT +
Preference number: 6 (lower is better)
Translates to: SSCSGTRWAAAY*PPAKAGRSETC
Trigger: ACACGTCTCAGATCTTCCTGCCTTCGCTGGAGGGCAATATGCAGCAGCCCAGCGAGTTCCACTGCATGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CAA 90 bp AGGATATTGATGACGAAGTGGGCCAGAGTGCACAGCAGACTGAACTaGGACACGGCCTTGAGGTTCTTAAGGAAGGCGCAAGGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: RILMTKWARVHSRLN*DTALRFLRKAQGSS
Trigger: GCTGCTGCCTTGCGCCTTCCTTAAGAACCTCAAGGCCGTGTCCAAGTTCAGTCTGCTGTGCACTCTGGCCCACTTCGTCATCAATATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2
CDS CAA 72 bp ATGACGAAGTGGGCCAGAGTGCACAGCAGACTGAACTaGGACACGGCCTTGAGGTTCTTAAGGAAGGCGCAA +
Preference number: 6 (lower is better)
Translates to: MTKWARVHSRLN*DTALRFLRKAQ
Trigger: TTGCGCCTTCCTTAAGAACCTCAAGGCCGTGTCCAAGTTCAGTCTGCTGTGCACTCTGGCCCACTTCGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217420.2