Pregenerated sensors for SLC31A1 (Homo sapiens)
Ensembl gene IDs: ENSG00000136868Ensembl transcript IDs: ENST00000374212.5
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GTAACATCAGCAGGAACTCAGAAGTGCCACTTTGGGGGCTTTTGGGTTGAGGCCGCCATCTTGGCTCACTaGAACCTCCGCCTCCTAGGT | + |
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Preference number: 2 (lower is better) Translates to: VTSAGTQKCHFGGFWVEAAILAH*NLRLLG Trigger: ACCTAGGAGGCGGAGGTTGCAGTGAGCCAAGATGGC...GGCCTCAACCCAAAAGCCCCCAAAGTGGCACTTCTGAGTTCCTGCTGATGTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| 3UTR-3UTR GCA 90 bp | GTAACATCAGCAGGAACTCAGAAGTGCCACTTTGGGGGCTTTTGGGTTGAGGCCAGGCGCCCACCACCATaGCCGGCTAATTTTTGTATT | + |
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Preference number: 2 (lower is better) Translates to: VTSAGTQKCHFGGFWVEARRPPP*PANFCI Trigger: AATACAAAAATTAGCCGGGCATGGTGGTGGGCGCCT...GGCCTCAACCCAAAAGCCCCCAAAGTGGCACTTCTGAGTTCCTGCTGATGTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| 3UTR-3UTR TCA 90 bp | GGCATGGGCCACTGTGTCCGGCCCTGGACCTTATTTTCTAATGTTAAGTTTGAGAAACTAAACCTCTGTTaGGCAGGGGTGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: GMGHCVRPWTLFSNVKFEKLNLC*AGVCVC Trigger: ACACACACACACCCCTGCTCAACAGAGGTTTAGTTT...CTCAAACTTAACATTAGAAAATAAGGTCCAGGGCCGGACACAGTGGCCCATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| 3UTR-3UTR GCA 90 bp | GGCATGGGCCACTGTGTCCGGCCCTGGACCTTATTTTCTAATGTTAAGTTTGAGGTGTGTGTGTGTACGTaGACAAAGAGGAGCAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: GMGHCVRPWTLFSNVKFEVCVCT*TKRSKK Trigger: CTTCTTGCTCCTCTTTGTGCACGTACACACACACAC...CTCAAACTTAACATTAGAAAATAAGGTCCAGGGCCGGACACAGTGGCCCATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| 3UTR GCA 72 bp | GTGTGGTCCCTTGTAACATCAGCAGGAACTCAGAAGTaGCACTTTGGGGGCTTTTGGGTTGAGGCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: VWSLVTSAGTQK*HFGGFWVEAQQ Trigger: TTGCTGGGCCTCAACCCAAAAGCCCCCAAAGTGGCACTTCTGAGTTCCTGCTGATGTTACAAGGGACCACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| 3UTR CCA 72 bp | TATTTCCTTAGCTTAAAGCACAGATTCTCAAAAGTGTaGTCCCTTGTAACATCAGCAGGAACTCAGAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: YFLSLKHRFSKV*SLVTSAGTQKC Trigger: GCACTTCTGAGTTCCTGCTGATGTTACAAGGGACCACACTTTTGAGAATCTGTGCTTTAAGCTAAGGAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR GCA 90 bp | GTAACATCAGCAGGAACTCAGAAGTGCCACTTTGGGGGCTTTTGGGTTGAGGCCGTCACCCGGGCTGAGTaGAGTGGCGCAATCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: VTSAGTQKCHFGGFWVEAVTRAE*SGAIMA Trigger: AGCCATGATTGCGCCACTGCACTCAGCCCGGGTGAC...GGCCTCAACCCAAAAGCCCCCAAAGTGGCACTTCTGAGTTCCTGCTGATGTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR GCA 90 bp | GTAACATCAGCAGGAACTCAGAAGTGCCACTTTGGGGGCTTTTGGGTTGAGGCCGCCATCTTGGCTCACTaGAACCTCCGCCTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: VTSAGTQKCHFGGFWVEAAILAH*NLRLLG Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCAAGATGGC...GGCCTCAACCCAAAAGCCCCCAAAGTGGCACTTCTGAGTTCCTGCTGATGTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR TCA 90 bp | GGCATGGGCCACTGTGTCCGGCCCTGGACCTTATTTTCTAATGTTAAGTTTGAGACTCCTGTCCTCAGGTaGTCCAGCCTGCCTTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GMGHCVRPWTLFSNVKFETPVLR*SSLPWP Trigger: GGGCCAAGGCAGGCTGGATCACCTGAGGACAGGAGT...CTCAAACTTAACATTAGAAAATAAGGTCCAGGGCCGGACACAGTGGCCCATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR CCA 90 bp | GTAACATCAGCAGGAACTCAGAAGTGCCACTTTGGGGGCTTTTGGGTTGAGGCCATCTGCACCCCCGCTTaGCCTCCCAAAGTGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: VTSAGTQKCHFGGFWVEAICTPA*PPKVCE Trigger: CTCACACACTTTGGGAGGCCAAGCGGGGGTGCAGAT...GGCCTCAACCCAAAAGCCCCCAAAGTGGCACTTCTGAGTTCCTGCTGATGTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR GCA 90 bp | GGCATGGGCCACTGTGTCCGGCCCTGGACCTTATTTTCTAATGTTAAGTTTGAGTCGCCCAGGCTGGAGTaGAATGGCGCCATCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: GMGHCVRPWTLFSNVKFESPRLE*NGAILA Trigger: AGCCAAGATGGCGCCATTGCACTCCAGCCTGGGCGA...CTCAAACTTAACATTAGAAAATAAGGTCCAGGGCCGGACACAGTGGCCCATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR TCA 90 bp | GTAACATCAGCAGGAACTCAGAAGTGCCACTTTGGGGGCTTTTGGGTTGAGGCCTGGGGGCTTTTGGGTTaGGGCCCAGCAATTAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: VTSAGTQKCHFGGFWVEAWGLLG*GPAISV Trigger: AACACTAATTGCTGGGCCTCAACCCAAAAGCCCCCA...GGCCTCAACCCAAAAGCCCCCAAAGTGGCACTTCTGAGTTCCTGCTGATGTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR TCA 90 bp | GTAACATCAGCAGGAACTCAGAAGTGCCACTTTGGGGGCTTTTGGGTTGAGGCCTTGGGATTACAGGCATaGGCCATTGGGTCTAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VTSAGTQKCHFGGFWVEALGLQA*AIGSSW Trigger: CCAGCTAGACCCAATGGCTCATGCCTGTAATCCCAA...GGCCTCAACCCAAAAGCCCCCAAAGTGGCACTTCTGAGTTCCTGCTGATGTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR TCA 90 bp | GGCATGGGCCACTGTGTCCGGCCCTGGACCTTATTTTCTAATGTTAAGTTTGAGCTTTGTCACCCGGGCTaGGTGCAGTGGCGCAATCAT | + |
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Preference number: 4 (lower is better) Translates to: GMGHCVRPWTLFSNVKFELCHPG*VQWRNH Trigger: ATGATTGCGCCACTGCACTCAGCCCGGGTGACAAAG...CTCAAACTTAACATTAGAAAATAAGGTCCAGGGCCGGACACAGTGGCCCATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR GCA 90 bp | GGCATGGGCCACTGTGTCCGGCCCTGGACCTTATTTTCTAATGTTAAGTTTGAGGCAATCATGGCTTACTaGAGCCTCGACCTCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GMGHCVRPWTLFSNVKFEAIMAY*SLDLQG Trigger: GCCCTGGAGGTCGAGGCTGCAGTAAGCCATGATTGC...CTCAAACTTAACATTAGAAAATAAGGTCCAGGGCCGGACACAGTGGCCCATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR GCA 90 bp | GTAACATCAGCAGGAACTCAGAAGTGCCACTTTGGGGGCTTTTGGGTTGAGGCCGTGTGTGAGCCACTGTaGCCAGCCCAGAGTTTCTAT | + |
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Preference number: 4 (lower is better) Translates to: VTSAGTQKCHFGGFWVEAVCEPL*PAQSFY Trigger: ATAGAAACTCTGGGCTGGGCACAGTGGCTCACACAC...GGCCTCAACCCAAAAGCCCCCAAAGTGGCACTTCTGAGTTCCTGCTGATGTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR TCA 90 bp | GGCATGGGCCACTGTGTCCGGCCCTGGACCTTATTTTCTAATGTTAAGTTTGAGCTGGTCTCAAACTCCTaGCCTCAGGTGATCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: GMGHCVRPWTLFSNVKFELVSNS*PQVICT Trigger: GGTGCAGATCACCTGAGGTCAGGAGTTTGAGACCAG...CTCAAACTTAACATTAGAAAATAAGGTCCAGGGCCGGACACAGTGGCCCATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR TCA 90 bp | GTAACATCAGCAGGAACTCAGAAGTGCCACTTTGGGGGCTTTTGGGTTGAGGCCAAACTAAACCTCTGTTaGGCAGGGGTGTGTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: VTSAGTQKCHFGGFWVEAKLNLC*AGVCVC Trigger: ACACACACACACCCCTGCTCAACAGAGGTTTAGTTT...GGCCTCAACCCAAAAGCCCCCAAAGTGGCACTTCTGAGTTCCTGCTGATGTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR TCA 90 bp | GTAACATCAGCAGGAACTCAGAAGTGCCACTTTGGGGGCTTTTGGGTTGAGGCCTCTAGCTGGCCTTACTaGTTAGGTTTTGTTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VTSAGTQKCHFGGFWVEASSWPY*LGFVAG Trigger: CCCAGCAACAAAACCTAATCAGTAAGGCCAGCTAGA...GGCCTCAACCCAAAAGCCCCCAAAGTGGCACTTCTGAGTTCCTGCTGATGTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR GCA 90 bp | GGCATGGGCCACTGTGTCCGGCCCTGGACCTTATTTTCTAATGTTAAGTTTGAGCTGCTGCTACTGCAATaGAGAGGTACCCGTTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GMGHCVRPWTLFSNVKFELLLLQ*RGTRCR Trigger: CCTACAACGGGTACCTCTGCATTGCAGTAGCAGCAG...CTCAAACTTAACATTAGAAAATAAGGTCCAGGGCCGGACACAGTGGCCCATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR GCA 90 bp | GGCATGGGCCACTGTGTCCGGCCCTGGACCTTATTTTCTAATGTTAAGTTTGAGGCAGGAACTCAGAAGTaGCACTTTGGGGGCTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: GMGHCVRPWTLFSNVKFEAGTQK*HFGGFW Trigger: CCAAAAGCCCCCAAAGTGGCACTTCTGAGTTCCTGC...CTCAAACTTAACATTAGAAAATAAGGTCCAGGGCCGGACACAGTGGCCCATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR CCA 90 bp | GGCATGGGCCACTGTGTCCGGCCCTGGACCTTATTTTCTAATGTTAAGTTTGAGCTGGTCTCGAACTTCTaGACACAAGCCATCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: GMGHCVRPWTLFSNVKFELVSNF*TQAILP Trigger: TGGGAGGATGGCTTGTGTCCAGAAGTTCGAGACCAG...CTCAAACTTAACATTAGAAAATAAGGTCCAGGGCCGGACACAGTGGCCCATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR GCA 90 bp | GTAACATCAGCAGGAACTCAGAAGTGCCACTTTGGGGGCTTTTGGGTTGAGGCCAAGCTCAGCATCTGTTaGCCAACAGTTTTGTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: VTSAGTQKCHFGGFWVEAKLSIC*PTVLCV Trigger: GACACACAAAACTGTTGGGCAACAGATGCTGAGCTT...GGCCTCAACCCAAAAGCCCCCAAAGTGGCACTTCTGAGTTCCTGCTGATGTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR CCA 90 bp | GGCATGGGCCACTGTGTCCGGCCCTGGACCTTATTTTCTAATGTTAAGTTTGAGCACTTTGGGGGCTTTTaGGTTGAGGCCCAGCAATTA | + |
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Preference number: 4 (lower is better) Translates to: GMGHCVRPWTLFSNVKFEHFGGF*VEAQQL Trigger: TAATTGCTGGGCCTCAACCCAAAAGCCCCCAAAGTG...CTCAAACTTAACATTAGAAAATAAGGTCCAGGGCCGGACACAGTGGCCCATGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR CCA 90 bp | GTAACATCAGCAGGAACTCAGAAGTGCCACTTTGGGGGCTTTTGGGTTGAGGCCTTGCTTCACTTCAGCTaGGACAAACCAAGGTATCAA | + |
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Preference number: 4 (lower is better) Translates to: VTSAGTQKCHFGGFWVEALLHFS*DKPRYQ Trigger: TTGATACCTTGGTTTGTCCCAGCTGAAGTGAAGCAA...GGCCTCAACCCAAAAGCCCCCAAAGTGGCACTTCTGAGTTCCTGCTGATGTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR CCA 90 bp | GGCATGGGCCACTGTGTCCGGCCCTGGACCTTATTTTCTAATGTTAAGTTTGAGCACTGTGTCCGGCCCTaGACCTTATTTTCTAATGTT | + |
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Preference number: 4 (lower is better) Translates to: GMGHCVRPWTLFSNVKFEHCVRP*TLFSNV Trigger: AACATTAGAAAATAAGGTCCAGGGCCGGACACAGTG...CTCAAACTTAACATTAGAAAATAAGGTCCAGGGCCGGACACAGTGGCCCATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR CAA 90 bp | GTAACATCAGCAGGAACTCAGAAGTGCCACTTTGGGGGCTTTTGGGTTGAGGCCTGGGGTTTCACCACATaGGCCAGGCTGGTCTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: VTSAGTQKCHFGGFWVEAWGFTT*ARLVSN Trigger: GTTTGAGACCAGCCTGGCCAATGTGGTGAAACCCCA...GGCCTCAACCCAAAAGCCCCCAAAGTGGCACTTCTGAGTTCCTGCTGATGTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR CAA 90 bp | GGCATGGGCCACTGTGTCCGGCCCTGGACCTTATTTTCTAATGTTAAGTTTGAGCTCAGAAGTGCCACTTaGGGGGCTTTTGGGTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: GMGHCVRPWTLFSNVKFELRSAT*GAFGLR Trigger: CCTCAACCCAAAAGCCCCCAAAGTGGCACTTCTGAG...CTCAAACTTAACATTAGAAAATAAGGTCCAGGGCCGGACACAGTGGCCCATGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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| CDS-3UTR CAA 90 bp | GTAACATCAGCAGGAACTCAGAAGTGCCACTTTGGGGGCTTTTGGGTTGAGGCCAAAGCTCAGCATCTGTaGCCCAACAGTTTTGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: VTSAGTQKCHFGGFWVEAKAQHL*PNSFVC Trigger: ACACACAAAACTGTTGGGCAACAGATGCTGAGCTTT...GGCCTCAACCCAAAAGCCCCCAAAGTGGCACTTCTGAGTTCCTGCTGATGTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374212.5 |
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