RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC30A9 (Homo sapiens)

Ensembl gene IDs: ENSG00000014824

Ensembl transcript IDs: ENST00000264451.12, ENST00000510460.1, ENST00000513699.5

Found 276 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTTCCTCTGGCTATGACTGCTTCCCCTTCGTATTCTGCCATGAATaGAGTTTCCCGAGGCCTCCCCAGAAGCAGAAGCTGCTATGTTTC +
Preference number: 1 (lower is better)
Translates to: SSSGYDCFPFVFCHE*SFPRPPQKQKLLCF
Trigger: GAAACATAGCAGCTTCTGCTTCTGGGGAGGCCTCGGGAAACTTCATTCATGGCAGAATACGAAGGGGAAGCAGTCATAGCCAGAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR TCA 90 bp AGGCAGAACTCATTTATCGCTCTGACTCCAGTGATGAAATTATTCTaGGTGTACTTTGAGCCATACTCCCTTTTCTTAAGGACTGCTTTA +
Preference number: 1 (lower is better)
Translates to: RQNSFIALTPVMKLF*VYFEPYSLFLRTAL
Trigger: TAAAGCAGTCCTTAAGAAAAGGGAGTATGGCTCAAAGTACACTCAGAATAATTTCATCACTGGAGTCAGAGCGATAAATGAGTTCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR TCA 90 bp AAAATCCGTACGGATGAGAAGGATCTGGTGTTTGAACAGACTTACTaGTGCCCAATGCTAGTAAACCCTGATTACAAGTATCAGATAATG +
Preference number: 1 (lower is better)
Translates to: KIRTDEKDLVFEQTY*CPMLVNPDYKYQIM
Trigger: CATTATCTGATACTTGTAATCAGGGTTTACTAGCATTGGGCATCAGTAAGTCTGTTCAAACACCAGATCCTTCTCATCCGTACGGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR CCA 90 bp TCCACATCTGATCTCAAGTATACAGTAAAAGACTCAGTATCTTCATaGGGACTTCGTCGTCTGATTTTTCGAAGTTGTTCTAGATCACTG +
Preference number: 1 (lower is better)
Translates to: STSDLKYTVKDSVSS*GLRRLIFRSCSRSL
Trigger: CAGTGATCTAGAACAACTTCGAAAAATCAGACGACGAAGTCCCCATGAAGATACTGAGTCTTTTACTGTATACTTGAGATCAGATGTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR GCA 90 bp CCATATACCAAAAACTCAAGCCTTATGACATTTTGTTATTCACTTTaGACTATGTGTGTGTGTGTAGGAGGATGTATGCAGGGATTACCT +
Preference number: 1 (lower is better)
Translates to: PYTKNSSLMTFCYSL*TMCVCVGGCMQGLP
Trigger: AGGTAATCCCTGCATACATCCTCCTACACACACACACATAGTGCAAAGTGAATAACAAAATGTCATAAGGCTTGAGTTTTTGGTATATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR CCA 90 bp TACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTaGGGTTCATCACATTTAAAAGAAATGCTGCCAAAGCTTGACAAA +
Preference number: 1 (lower is better)
Translates to: YLRFFASLTSDSLAN*GSSHLKEMLPKLDK
Trigger: TTTGTCAAGCTTTGGCAGCATTTCTTTTAAATGTGATGAACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR TCA 90 bp TGTGGCACCTACCCCCAATCCCCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTGCTTCTGCATGGCACTaGGTCTTTCAGTGTAGGAGA +
Preference number: 2 (lower is better)
Translates to: CGTYPQSPPLALPLAMTAASAWH*VFQCRR
Trigger: TCTCCTACACTGAAAGACTCAGTGCCATGCAGAAGC...AGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGGGGATTGGGGGTAGGTGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR TCA 90 bp TATTCTGCCATGAATGAAGTTTCCCGAGGCCTCCCCAGAAGCAGAAGCTGCTATTGCCCAGGCTGGTCTTaGCCTCCTGAGCTCAAGCAA +
Preference number: 2 (lower is better)
Translates to: YSAMNEVSRGLPRSRSCYCPGWS*PPELKQ
Trigger: TTGCTTGAGCTCAGGAGGTCAAGACCAGCCTGGGCA...ATAGCAGCTTCTGCTTCTGGGGAGGCCTCGGGAAACTTCATTCATGGCAGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR TCA 90 bp AGGAATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGGCTTCTGCATGGCACTaGGTCTTTCAGTGTAGGAGA +
Preference number: 2 (lower is better)
Translates to: RNAETMPNKVPTPKEPRLASAWH*VFQCRR
Trigger: TCTCCTACACTGAAAGACTCAGTGCCATGCAGAAGC...CAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR TCA 90 bp AACTGTGCCACCTTATATAGTTTGGGGACTGCTACTTACAGTGAATTAGAGATCCCTCTGGGGCTCAAGTaGTCCTCCCACCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: NCATLYSLGTATYSELEIPLGLK*SSHLGL
Trigger: GAGGCCGAGGTGGGAGGATCACTTGAGCCCCAGAGG...GATCTCTAATTCACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGGCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR TCA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCGACTGCTACTTACAGTaGATTAGAGATCCATTCTCA +
Preference number: 2 (lower is better)
Translates to: ESGGEGCGELQLCQCTPADCYLQ*IRDPFS
Trigger: TGAGAATGGATCTCTAATTCACTGTAAGTAGCAGTC...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR TCA 90 bp TGTGGCACCTACCCCCAATCCCCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTGACTTTGAAACGGAGTaGCTGTTTAAAAACCACATA +
Preference number: 2 (lower is better)
Translates to: CGTYPQSPPLALPLAMTADFETE*LFKNHI
Trigger: TATGTGGTTTTTAAACAGTCACTCCGTTTCAAAGTC...AGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGGGGATTGGGGGTAGGTGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR CCA 90 bp AACTGTGCCACCTTATATAGTTTGGGGACTGCTACTTACAGTGAATTAGAGATCGGAGGTAGGGCCTGGTaGGAGATGACTGGATCACGG +
Preference number: 2 (lower is better)
Translates to: NCATLYSLGTATYSELEIGGRAW*EMTGSR
Trigger: CCGTGATCCAGTCATCTCCCACCAGGCCCTACCTCC...GATCTCTAATTCACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGGCACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR CCA 90 bp ATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGTCATTGCTGTTCTGGAGCGTaGCTTGGTATTTCCCAAGAA +
Preference number: 2 (lower is better)
Translates to: MLRPCLIRCPHPKNLGCHCCSGA*LGISQE
Trigger: TTCTTGGGAAATACCAAGCCACGCTCCAGAACAGCA...ATGACAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR TCA 90 bp AGGAATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGATTCTGAGTGTACTTTaGGCCATACTCCCTTTTCTT +
Preference number: 2 (lower is better)
Translates to: RNAETMPNKVPTPKEPRLILSVL*AILPFL
Trigger: AAGAAAAGGGAGTATGGCTCAAAGTACACTCAGAAT...CAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR TCA 90 bp GTTTTAAGACACAGATCTCACACAGGCAGTTGGGTCCACATGTTAAGAACTCATGCCGCCATTCTCATATaGACAATGCTCACTGCTACC +
Preference number: 2 (lower is better)
Translates to: VLRHRSHTGSWVHMLRTHAAILI*TMLTAT
Trigger: GGTAGCAGTGAGCATTGTTCATATGAGAATGGCGGC...ATGAGTTCTTAACATGTGGACCCAACTGCCTGTGTGAGATCTGTGTCTTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR TCA 90 bp GCCTGTTATAGAAGTAAGGCCCATGCAAGTGGCTGCTATTATAACTCCCAAGACCTAGATCACTGGATTTaGGGCAGAACTCATTTATCG +
Preference number: 2 (lower is better)
Translates to: ACYRSKAHASGCYYNSQDLDHWI*GRTHLS
Trigger: CGATAAATGAGTTCTGCCTCAAATCCAGTGATCTAG...GTCTTGGGAGTTATAATAGCAGCCACTTGCATGGGCCTTACTTCTATAACAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR TCA 90 bp TGGTACCAAGATAGTCCTGCACCCATCATGAAAATACCAACACCACTAATTAGCGAAGGATCTGGTGTTTaGACAGACTTACTGATGCCC +
Preference number: 2 (lower is better)
Translates to: WYQDSPAPIMKIPTPLISEGSGV*TDLLMP
Trigger: GGGCATCAGTAAGTCTGTTCAAACACCAGATCCTTC...GCTAATTAGTGGTGTTGGTATTTTCATGATGGGTGCAGGACTATCTTGGTACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR CCA 90 bp AAGGGATTCTATTGGTTGAGGATGAAGCAATCCCATGACTCCATGGTACCAAGAGACTCAGTATCTTCATaGGGACTTCGTCGTCTGATT +
Preference number: 2 (lower is better)
Translates to: KGFYWLRMKQSHDSMVPRDSVSS*GLRRLI
Trigger: AATCAGACGACGAAGTCCCCATGAAGATACTGAGTC...TCTTGGTACCATGGAGTCATGGGATTGCTTCATCCTCAACCAATAGAATCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR TCA 90 bp TGGTACCAAGATAGTCCTGCACCCATCATGAAAATACCAACACCACTAATTAGCGGGGACTTCGTCGTCTaGTTTTTCGAAGTTGTTCTA +
Preference number: 2 (lower is better)
Translates to: WYQDSPAPIMKIPTPLISGDFVV*FFEVVL
Trigger: TAGAACAACTTCGAAAAATCAGACGACGAAGTCCCC...GCTAATTAGTGGTGTTGGTATTTTCATGATGGGTGCAGGACTATCTTGGTACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR TCA 90 bp GCCTGTTATAGAAGTAAGGCCCATGCAAGTGGCTGCTATTATAACTCCCAAGACTTTGAACAGACTTACTaGTGCCCAATGCTAGTAAAC +
Preference number: 2 (lower is better)
Translates to: ACYRSKAHASGCYYNSQDFEQTY*CPMLVN
Trigger: GTTTACTAGCATTGGGCATCAGTAAGTCTGTTCAAA...GTCTTGGGAGTTATAATAGCAGCCACTTGCATGGGCCTTACTTCTATAACAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR TCA 90 bp CCCACACCCAAAGAACCTAGGCTGTCATACAGTGGATTGCCTGTTATAGAAGTATACATACTTGTAAAATaGCATTCCTTTAGCCCGAGC +
Preference number: 2 (lower is better)
Translates to: PTPKEPRLSYSGLPVIEVYILVK*HSFSPS
Trigger: GCTCGGGCTAAAGGAATGTCATTTTACAAGTATGTA...TACTTCTATAACAGGCAATCCACTGTATGACAGCCTAGGTTCTTTGGGTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR GCA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTCCAATCCCCGCCTCTTaGTCTTCCTCTGGCTATGAC +
Preference number: 2 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTPIPAS*SSSGYD
Trigger: GTCATAGCCAGAGGAAGAGCAAGAGGCGGGGATTGG...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR CAA 90 bp CTCACAGGTTCTTTAGTGTATGTTCAGGAACTTACCTCTTTGGAGTaGGATACTATAGGCCCCCAGGATACTCCACTTAAAAACAGATCA +
Preference number: 2 (lower is better)
Translates to: LTGSLVYVQELTSLE*DTIGPQDTPLKNRS
Trigger: TGATCTGTTTTTAAGTGGAGTATCCTGGGGGCCTATAGTATCCAACTCCAAAGAGGTAAGTTCCTGAACATACACTAAAGAACCTGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR CCA 90 bp AACTGTGCCACCTTATATAGTTTGGGGACTGCTACTTACAGTGAATTAGAGATCTCTCACACAGGCAGTTaGGTCCACATGTTAAGAACT +
Preference number: 2 (lower is better)
Translates to: NCATLYSLGTATYSELEISHTGS*VHMLRT
Trigger: AGTTCTTAACATGTGGACCCAACTGCCTGTGTGAGA...GATCTCTAATTCACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGGCACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR CCA 90 bp GCATTCCTACGAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTTTCTGGAGCGTGGCTTaGTATTTCCCAAGAAATCTC +
Preference number: 2 (lower is better)
Translates to: AFLRSSFTATRSVAPSDTFWSVA*YFPRNL
Trigger: GAGATTTCTTGGGAAATACCAAGCCACGCTCCAGAA...AGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTCGTAGGAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR CCA 90 bp GAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAATGATCCTGACACTGATGCTGTTCTaGAGCGTGGCTTGGTATTTC +
Preference number: 2 (lower is better)
Translates to: EVHLQQQEVLLLQILMILTLMLF*SVAWYF
Trigger: GAAATACCAAGCCACGCTCCAGAACAGCATCAGTGT...CAGGATCATTAGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR CAA 90 bp TCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTTACCTCTTaGGAGTTGGATACTATAGGCCCCCAGGATACTCCACTTAAAAAC +
Preference number: 2 (lower is better)
Translates to: SYLTGSLVYVQELTS*ELDTIGPQDTPLKN
Trigger: GTTTTTAAGTGGAGTATCCTGGGGGCCTATAGTATCCAACTCCAAAGAGGTAAGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR TCA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTCAGATCTTGATGGAGTaGAATCTTCAGAGGCAACAA +
Preference number: 2 (lower is better)
Translates to: FYLRFFASLTSDSLANWGQILME*NLQRQQ
Trigger: TTGTTGCCTCTGAAGATTTCACTCCATCAAGATCTG...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR TCA 90 bp GTTTTAAGACACAGATCTCACACAGGCAGTTGGGTCCACATGTTAAGAACTCATAAGATTGGCAGATCTTaGTGGAGTGAAATCTTCAGA +
Preference number: 2 (lower is better)
Translates to: VLRHRSHTGSWVHMLRTHKIGRS*WSEIFR
Trigger: TCTGAAGATTTCACTCCATCAAGATCTGCCAATCTT...ATGAGTTCTTAACATGTGGACCCAACTGCCTGTGTGAGATCTGTGTCTTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR TCA 90 bp GAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAATGATCCTGGATGAAGCAATCCCATaGCTCCATGGTACCAAGATA +
Preference number: 2 (lower is better)
Translates to: EVHLQQQEVLLLQILMILDEAIP*LHGTKI
Trigger: TATCTTGGTACCATGGAGTCATGGGATTGCTTCATC...CAGGATCATTAGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR GCA 90 bp TGGTACCAAGATAGTCCTGCACCCATCATGAAAATACCAACACCACTAATTAGCTCCATTGATGCAAATTaGAACCATCACCACTTTTCC +
Preference number: 2 (lower is better)
Translates to: WYQDSPAPIMKIPTPLISSIDAN*NHHHFS
Trigger: GGAAAAGTGGTGATGGTTGCAATTTGCATCAATGGA...GCTAATTAGTGGTGTTGGTATTTTCATGATGGGTGCAGGACTATCTTGGTACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR CCA 90 bp AACTGTGCCACCTTATATAGTTTGGGGACTGCTACTTACAGTGAATTAGAGATCGGAAACTTTGTAGAGTaGACGGACAAACTTGTTTCC +
Preference number: 2 (lower is better)
Translates to: NCATLYSLGTATYSELEIGNFVE*TDKLVS
Trigger: GGAAACAAGTTTGTCCGTCCACTCTACAAAGTTTCC...GATCTCTAATTCACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGGCACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR CCA 90 bp GCATTCCTACGAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTGGAAACTTTGTAGAGTaGACGGACAAACTTGTTTCC +
Preference number: 2 (lower is better)
Translates to: AFLRSSFTATRSVAPSDTGNFVE*TDKLVS
Trigger: GGAAACAAGTTTGTCCGTCCACTCTACAAAGTTTCC...AGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTCGTAGGAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR CCA 90 bp GTTTTAAGACACAGATCTCACACAGGCAGTTGGGTCCACATGTTAAGAACTCATCATCACACTGGCCCATaGAAATATCTAGGACTATAT +
Preference number: 2 (lower is better)
Translates to: VLRHRSHTGSWVHMLRTHHHTGP*KYLGLY
Trigger: ATATAGTCCTAGATATTTCCATGGGCCAGTGTGATG...ATGAGTTCTTAACATGTGGACCCAACTGCCTGTGTGAGATCTGTGTCTTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR CCA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTAGAAGGAATCAATCATaGACCCTTGACTGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTRRNQS*TLDCPS
Trigger: GGAGGGGCAGTCAAGGGTCCATGATTGATTCCTTCT...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR TCA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTAAGTACAGTATACACTaGACAGGTGAAATATGGGAC +
Preference number: 2 (lower is better)
Translates to: FYLRFFASLTSDSLANWGKYSIH*TGEIWD
Trigger: GTCCCATATTTCACCTGTTCAGTGTATACTGTACTT...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR GCA 90 bp AACTGTGCCACCTTATATAGTTTGGGGACTGCTACTTACAGTGAATTAGAGATCATTTGGAATACCTGCTaGACATTAACTTTGAGGGTC +
Preference number: 2 (lower is better)
Translates to: NCATLYSLGTATYSELEIIWNTC*TLTLRV
Trigger: GACCCTCAAAGTTAATGTGCAGCAGGTATTCCAAAT...GATCTCTAATTCACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGGCACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR CCA 90 bp GAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAATGATCCTGCGGATGAGAAGGATCTaGTGTTTGAACAGACTTACT +
Preference number: 2 (lower is better)
Translates to: EVHLQQQEVLLLQILMILRMRRI*CLNRLT
Trigger: AGTAAGTCTGTTCAAACACCAGATCCTTCTCATCCG...CAGGATCATTAGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR CAA 90 bp ATTTCCATTCCAGTAAGTTTTAAGACACAGATCTCACACAGGCAGTaGGGTCCACATGTTAAGAACTCATTAATTCAGCAAAGAGATCAC +
Preference number: 2 (lower is better)
Translates to: ISIPVSFKTQISHRQ*GPHVKNSLIQQRDH
Trigger: GTGATCTCTTTGCTGAATTAATGAGTTCTTAACATGTGGACCCAACTGCCTGTGTGAGATCTGTGTCTTAAAACTTACTGGAATGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR TCA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTGAAAATTTTTCCGTCTaGTCTTATCTCACAGGTTCT +
Preference number: 2 (lower is better)
Translates to: FYLRFFASLTSDSLANWGENFSV*SYLTGS
Trigger: AGAACCTGTGAGATAAGATCAGACGGAAAAATTTTC...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR GCA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTTTTGATGATGACAGCTaGAGCTTTTCACCACATTTT +
Preference number: 2 (lower is better)
Translates to: FYLRFFASLTSDSLANWGFDDDS*SFSPHF
Trigger: AAAATGTGGTGAAAAGCTGCAGCTGTCATCATCAAA...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR GCA 90 bp GTTTTAAGACACAGATCTCACACAGGCAGTTGGGTCCACATGTTAAGAACTCATATGAACAATGCTCACTaGTACCTGAACATTTTAAAG +
Preference number: 2 (lower is better)
Translates to: VLRHRSHTGSWVHMLRTHMNNAH*YLNILK
Trigger: CTTTAAAATGTTCAGGTAGCAGTGAGCATTGTTCAT...ATGAGTTCTTAACATGTGGACCCAACTGCCTGTGTGAGATCTGTGTCTTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR TCA 90 bp GAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAATGATCCTGAGCAGTTTAATCCATTaGTGCAAATTGCAACCATCA +
Preference number: 2 (lower is better)
Translates to: EVHLQQQEVLLLQILMILSSLIH*CKLQPS
Trigger: TGATGGTTGCAATTTGCATCAATGGATTAAACTGCT...CAGGATCATTAGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR CAA 90 bp GTAACACTGAAAGCCATATACCAAAAACTCAAGCCTTATGACATTTaGTTATTCACTTTGCACTATGTGTGTGTGTGTAGGAGGATGTAT +
Preference number: 2 (lower is better)
Translates to: VTLKAIYQKLKPYDI*LFTLHYVCVCRRMY
Trigger: ATACATCCTCCTACACACACACACATAGTGCAAAGTGAATAACAAAATGTCATAAGGCTTGAGTTTTTGGTATATGGCTTTCAGTGTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR CCA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTAAAAAGTCATCACACTaGCCCATGGAAATATCTAGG +
Preference number: 2 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTKKSSH*PMEISR
Trigger: CCTAGATATTTCCATGGGCCAGTGTGATGACTTTTT...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR CAA 90 bp AGGTATGGAGAAATAATTTCCACATTCTATAAGGAAAGACAGACTTaGAAACGGAGTGACTGTTTAAAAACCACATACCAAGATTTAGCC +
Preference number: 2 (lower is better)
Translates to: RYGEIISTFYKERQT*KRSDCLKTTYQDLA
Trigger: GGCTAAATCTTGGTATGTGGTTTTTAAACAGTCACTCCGTTTCAAAGTCTGTCTTTCCTTATAGAATGTGGAAATTATTTCTCCATACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR GCA 72 bp GAGGCAGGAGAATCACTTGAATCGGGAGGTGAAGGTTaGGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: EAGESLESGGEG*GELQLCQCTPA
Trigger: GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTCAAGTGATTCTCCTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR CAA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCATCTCACACAGGCAGTaGGGTCCACATGTTAAGAAC +
Preference number: 3 (lower is better)
Translates to: ESGGEGCGELQLCQCTPAISHRQ*GPHVKN
Trigger: GTTCTTAACATGTGGACCCAACTGCCTGTGTGAGAT...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR TCA 72 bp GGCTATGACTGCTTCCCCTTCGTATTCTGCCATGAATaGAGTTTCCCGAGGCCTCCCCAGAAGCAGAAGCTG +
Preference number: 3 (lower is better)
Translates to: GYDCFPFVFCHE*SFPRPPQKQKL
Trigger: CAGCTTCTGCTTCTGGGGAGGCCTCGGGAAACTTCATTCATGGCAGAATACGAAGGGGAAGCAGTCATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR CCA 72 bp TCCAGGAGTTCAGTGAGCCGTTGTACTTGTTCTGGCTaGATGGACCGCCCTAAGAGTGCTTCTGTGTTAGTG +
Preference number: 3 (lower is better)
Translates to: SRSSVSRCTCSG*MDRPKSASVLV
Trigger: CACTAACACAGAAGCACTCTTAGGGCGGTCCATCCAGCCAGAACAAGTACAACGGCTCACTGAACTCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR CAA 90 bp TATTCTGCCATGAATGAAGTTTCCCGAGGCCTCCCCAGAAGCAGAAGCTGCTATAGTGGACGGACAAACTaGTTTCCAAGGTCCCCACCC +
Preference number: 3 (lower is better)
Translates to: YSAMNEVSRGLPRSRSCYSGRTN*FPRSPP
Trigger: GGGTGGGGACCTTGGAAACAAGTTTGTCCGTCCACT...ATAGCAGCTTCTGCTTCTGGGGAGGCCTCGGGAAACTTCATTCATGGCAGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR CCA 72 bp GTCTTTCAGTGTAGGAGAGGAGGAAACTTTGTAGAGTaGACGGACAAACTTGTTTCCAAGGTCCCCACCCAG +
Preference number: 3 (lower is better)
Translates to: VFQCRRGGNFVE*TDKLVSKVPTQ
Trigger: CTGGGTGGGGACCTTGGAAACAAGTTTGTCCGTCCACTCTACAAAGTTTCCTCCTCTCCTACACTGAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264451.12
ENST00000513699.5
3UTR-3UTR CAA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTTGTAATCCCAGCACTTaGGGAAGCCGAGGAGGGCGG +
Preference number: 3 (lower is better)
Translates to: FYLRFFASLTSDSLANWGCNPST*GSRGGR
Trigger: CCGCCCTCCTCGGCTTCCCAAAGTGCTGGGATTACA...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR CAA 90 bp TGGTACCAAGATAGTCCTGCACCCATCATGAAAATACCAACACCACTAATTAGCAGTGGACGGACAAACTaGTTTCCAAGGTCCCCACCC +
Preference number: 3 (lower is better)
Translates to: WYQDSPAPIMKIPTPLISSGRTN*FPRSPP
Trigger: GGGTGGGGACCTTGGAAACAAGTTTGTCCGTCCACT...GCTAATTAGTGGTGTTGGTATTTTCATGATGGGTGCAGGACTATCTTGGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR CAA 90 bp AGGAATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGAAAAGTGTGGGCCTCTaGTTCTTTAATTGCCTTACT +
Preference number: 3 (lower is better)
Translates to: RNAETMPNKVPTPKEPRLKSVGL*FFNCLT
Trigger: AGTAAGGCAATTAAAGAACAAGAGGCCCACACTTTT...CAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR TCA 72 bp CACCTTCCCCTCTTGGTACTGTATAGTGAGTTCTCATaGGATCTGGTTGTTTACAAGAGTGTGGCACCTACC +
Preference number: 3 (lower is better)
Translates to: HLPLLVLYSEFS*DLVVYKSVAPT
Trigger: GGTAGGTGCCACACTCTTGTAAACAACCAGATCTCATGAGAACTCACTATACAGTACCAAGAGGGGAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR TCA 72 bp GAAGGGATTCTATTGGTTGAGGATGAAGCAATCCCATaGCTCCATGGTACCAAGATAGTCCTGCACCCATCA +
Preference number: 3 (lower is better)
Translates to: EGILLVEDEAIP*LHGTKIVLHPS
Trigger: TGATGGGTGCAGGACTATCTTGGTACCATGGAGTCATGGGATTGCTTCATCCTCAACCAATAGAATCCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR TCA 72 bp GGACGGACAAACTTGTTTCCAAGGTCCCCACCCAGGTaGTTCATTCCATCAAACTCACAGTATCTCCAAATC +
Preference number: 3 (lower is better)
Translates to: GRTNLFPRSPPR*FIPSNSQYLQI
Trigger: GATTTGGAGATACTGTGAGTTTGATGGAATGAATCACCTGGGTGGGGACCTTGGAAACAAGTTTGTCCGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR CCA 72 bp CCCTCTTGGTACTGTATAGTGAGTTCTCATGAGATCTaGTTGTTTACAAGAGTGTGGCACCTACCCCCAATC +
Preference number: 3 (lower is better)
Translates to: PSWYCIVSSHEI*LFTRVWHLPPI
Trigger: GATTGGGGGTAGGTGCCACACTCTTGTAAACAACCAGATCTCATGAGAACTCACTATACAGTACCAAGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR CAA 90 bp ATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGTCATTATTCTGAGTGTACTTaGAGCCATACTCCCTTTTCT +
Preference number: 3 (lower is better)
Translates to: MLRPCLIRCPHPKNLGCHYSECT*SHTPFS
Trigger: AGAAAAGGGAGTATGGCTCAAAGTACACTCAGAATA...ATGACAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR CAA 90 bp ATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGTCATTCTAGATCACTGGATTaGAGGCAGAACTCATTTATC +
Preference number: 3 (lower is better)
Translates to: MLRPCLIRCPHPKNLGCHSRSLD*RQNSFI
Trigger: GATAAATGAGTTCTGCCTCAAATCCAGTGATCTAGA...ATGACAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR CAA 90 bp CCCACACCCAAAGAACCTAGGCTGTCATACAGTGGATTGCCTGTTATAGAAGTACAGCAACAAGAAGTGTaGCTCCTTCAGATACTAATG +
Preference number: 3 (lower is better)
Translates to: PTPKEPRLSYSGLPVIEVQQQEV*LLQILM
Trigger: CATTAGTATCTGAAGGAGCAACACTTCTTGTTGCTG...TACTTCTATAACAGGCAATCCACTGTATGACAGCCTAGGTTCTTTGGGTGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR CCA 72 bp TGGAGTTCTCATGAATACTTTAGCACCTTCCCCTCTTaGTACTGTATAGTGAGTTCTCATGAGATCTGGTTG +
Preference number: 3 (lower is better)
Translates to: WSSHEYFSTFPS*YCIVSSHEIWL
Trigger: CAACCAGATCTCATGAGAACTCACTATACAGTACCAAGAGGGGAAGGTGCTAAAGTATTCATGAGAACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR CAA 90 bp AACTGTGCCACCTTATATAGTTTGGGGACTGCTACTTACAGTGAATTAGAGATCTGCTGCACATTAACTTaGAGGGTCGTCTTGGGAAAA +
Preference number: 3 (lower is better)
Translates to: NCATLYSLGTATYSELEICCTLT*RVVLGK
Trigger: TTTTCCCAAGACGACCCTCAAAGTTAATGTGCAGCA...GATCTCTAATTCACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGGCACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR CAA 90 bp AACTGTGCCACCTTATATAGTTTGGGGACTGCTACTTACAGTGAATTAGAGATCTCTCATGAGATCTGGTaGTTTACAAGAGTGTGGCAC +
Preference number: 3 (lower is better)
Translates to: NCATLYSLGTATYSELEISHEIW*FTRVWH
Trigger: GTGCCACACTCTTGTAAACAACCAGATCTCATGAGA...GATCTCTAATTCACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGGCACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR CAA 90 bp GAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAATGATCCTGGTTCTGGAGCGTGGCTaGGTATTTCCCAAGAAATCT +
Preference number: 3 (lower is better)
Translates to: EVHLQQQEVLLLQILMILVLERG*VFPKKS
Trigger: AGATTTCTTGGGAAATACCAAGCCACGCTCCAGAAC...CAGGATCATTAGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR CAA 90 bp GCCTGTTATAGAAGTAAGGCCCATGCAAGTGGCTGCTATTATAACTCCCAAGACAAGCAGTTTAATCCATaGATGCAAATTGCAACCATC +
Preference number: 3 (lower is better)
Translates to: ACYRSKAHASGCYYNSQDKQFNP*MQIATI
Trigger: GATGGTTGCAATTTGCATCAATGGATTAAACTGCTT...GTCTTGGGAGTTATAATAGCAGCCACTTGCATGGGCCTTACTTCTATAACAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR CAA 90 bp GCCTGTTATAGAAGTAAGGCCCATGCAAGTGGCTGCTATTATAACTCCCAAGACAAATATAGCGCATATTaGAAAATCCGTACGGATGAG +
Preference number: 3 (lower is better)
Translates to: ACYRSKAHASGCYYNSQDKYSAY*KIRTDE
Trigger: CTCATCCGTACGGATTTTCAAATATGCGCTATATTT...GTCTTGGGAGTTATAATAGCAGCCACTTGCATGGGCCTTACTTCTATAACAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR TCA 72 bp ACGGATGAGAAGGATCTGGTGTTTGAACAGACTTACTaGTGCCCAATGCTAGTAAACCCTGATTACAAGTAT +
Preference number: 3 (lower is better)
Translates to: TDEKDLVFEQTY*CPMLVNPDYKY
Trigger: ATACTTGTAATCAGGGTTTACTAGCATTGGGCATCAGTAAGTCTGTTCAAACACCAGATCCTTCTCATCCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR CAA 90 bp GAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAATGATCCTGAGAAGGATCTGGTGTTaGAACAGACTTACTGATGCC +
Preference number: 3 (lower is better)
Translates to: EVHLQQQEVLLLQILMILRRIWC*NRLTDA
Trigger: GGCATCAGTAAGTCTGTTCAAACACCAGATCCTTCT...CAGGATCATTAGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR TCA 72 bp TCTGACTCCAGTGATGAAATTATTCTGAGTGTACTTTaGGCCATACTCCCTTTTCTTAAGGACTGCTTTAAC +
Preference number: 3 (lower is better)
Translates to: SDSSDEIILSVL*AILPFLKDCFN
Trigger: GTTAAAGCAGTCCTTAAGAAAAGGGAGTATGGCTCAAAGTACACTCAGAATAATTTCATCACTGGAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR GCA 72 bp AAAGAGATCACCCAGCCGCCATTCTCATATGAACAATaGTCACTGCTACCTGAACATTTTAAAGTATGTTAT +
Preference number: 3 (lower is better)
Translates to: KEITQPPFSYEQ*SLLPEHFKVCY
Trigger: ATAACATACTTTAAAATGTTCAGGTAGCAGTGAGCATTGTTCATATGAGAATGGCGGCTGGGTGATCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR CCA 72 bp GATCTCAAGTATACAGTAAAAGACTCAGTATCTTCATaGGGACTTCGTCGTCTGATTTTTCGAAGTTGTTCT +
Preference number: 3 (lower is better)
Translates to: DLKYTVKDSVSS*GLRRLIFRSCS
Trigger: AGAACAACTTCGAAAAATCAGACGACGAAGTCCCCATGAAGATACTGAGTCTTTTACTGTATACTTGAGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513699.5
3UTR-3UTR CAA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTATATGCTTTGGATCTTaGTCCCCACCAAATCTCATG +
Preference number: 3 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTICFGS*SPPNLM
Trigger: CATGAGATTTGGTGGGGACAAAGATCCAAAGCATAT...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR-3UTR CAA 90 bp CTTAGCACTCAGGTCAAAATCACAAGGTATGGAGAAATAATTTCCACATTCTATAAGGAAAGACAGACTTaGAAACGGAGTGACTGTTTA +
Preference number: 3 (lower is better)
Translates to: LSTQVKITRYGEIISTFYKERQT*KRSDCL
Trigger: TAAACAGTCACTCCGTTTCAAAGTCTGTCTTTCCTT...ATAGAATGTGGAAATTATTTCTCCATACCTTGTGATTTTGACCTGAGTGCTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR GCA 72 bp GATCCATTCTCAGCCAAAGCTAAAAGTAGGTACAGATaGTTTTTACTTATTATTGGGTTATGTGCCAATAAA +
Preference number: 3 (lower is better)
Translates to: DPFSAKAKSRYR*FLLIIGLCANK
Trigger: TTTATTGGCACATAACCCAATAATAAGTAAAAAGCATCTGTACCTACTTTTAGCTTTGGCTGAGAATGGATC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCCCTCTGGGGCTCAAGTaGTCCTCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: ESGGEGCGELQLCQCTPAPLGLK*SSHLGL
Trigger: GAGGCCGAGGTGGGAGGATCACTTGAGCCCCAGAGG...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp CCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTTCCCCTTCGTATTCTGCCATGGACCAGCTACATCTGTaGGCCGCGGCGGCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PPLALPLAMTASPSYSAMDQLHL*AAAAAK
Trigger: CTTGGCCGCCGCCGCGGCCCACAGATGTAGCTGGTC...CATGGCAGAATACGAAGGGGAAGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp TGTGGCACCTACCCCCAATCCCCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTGGAGGTAGGGCCTGGTaGGAGATGACTGGATCACGG +
Preference number: 4 (lower is better)
Translates to: CGTYPQSPPLALPLAMTAGGRAW*EMTGSR
Trigger: CCGTGATCCAGTCATCTCCCACCAGGCCCTACCTCC...AGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGGGGATTGGGGGTAGGTGCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR GCA 90 bp TATTCTGCCATGAATGAAGTTTCCCGAGGCCTCCCCAGAAGCAGAAGCTGCTATTCGGACACCGCCTTCTaGCTCCGCGCCGCCACCGGT +
Preference number: 4 (lower is better)
Translates to: YSAMNEVSRGLPRSRSCYSDTAF*LRAATG
Trigger: ACCGGTGGCGGCGCGGAGGCAGAAGGCGGTGTCCGA...ATAGCAGCTTCTGCTTCTGGGGAGGCCTCGGGAAACTTCATTCATGGCAGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR GCA 90 bp GCTGTCATACAGTGGATTGCCTGTTATAGAAGTAAGGCCCATGCAAGTGGCTGCTCGGACACCGCCTTCTaGCTCCGCGCCGCCACCGGT +
Preference number: 4 (lower is better)
Translates to: AVIQWIACYRSKAHASGCSDTAF*LRAATG
Trigger: ACCGGTGGCGGCGCGGAGGCAGAAGGCGGTGTCCGA...GCAGCCACTTGCATGGGCCTTACTTCTATAACAGGCAATCCACTGTATGACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR GCA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCGGTGAGCTGCAATTGTaGCAGTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ESGGEGCGELQLCQCTPAGELQL*QCTPAW
Trigger: CCAGGCTGGAGTGCACTGGCACAATTGCAGCTCACC...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp TGTGGCACCTACCCCCAATCCCCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTATCAGCGAACACCGATaGCTTCGCCGCCACAAGCTG +
Preference number: 4 (lower is better)
Translates to: CGTYPQSPPLALPLAMTAISEHR*LRRHKL
Trigger: CAGCTTGTGGCGGCGAAGCCATCGGTGTTCGCTGAT...AGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGGGGATTGGGGGTAGGTGCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR GCA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCTCGGGAGGTGAAGGTTaGGGTGAGCTGCAATTGTGC +
Preference number: 4 (lower is better)
Translates to: ESGGEGCGELQLCQCTPASGGEG*GELQLC
Trigger: GCACAATTGCAGCTCACCGCAACCTTCACCTCCCGA...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp GCTGTCATACAGTGGATTGCCTGTTATAGAAGTAAGGCCCATGCAAGTGGCTGCACTCCTGGCGGTCGCTaGGATTACAGGCCGCCGCCC +
Preference number: 4 (lower is better)
Translates to: AVIQWIACYRSKAHASGCTPGGR*DYRPPP
Trigger: GGGCGGCGGCCTGTAATCCCAGCGACCGCCAGGAGT...GCAGCCACTTGCATGGGCCTTACTTCTATAACAGGCAATCCACTGTATGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCCTTGTTCTGGCTGGATaGACCGCCCTAAGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: ESGGEGCGELQLCQCTPALVLAG*TALRVL
Trigger: AAGCACTCTTAGGGCGGTCCATCCAGCCAGAACAAG...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp CCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTTCCCCTTCGTATTCTGCCATGCTGGTGGGAGATGACTaGATCACGGGGGTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: PPLALPLAMTASPSYSAMLVGDD*ITGVEF
Trigger: GAACTCCACCCCCGTGATCCAGTCATCTCCCACCAG...CATGGCAGAATACGAAGGGGAAGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCGCCGCCATTCTCATATaGACAATGCTCACTGCTACC +
Preference number: 4 (lower is better)
Translates to: ESGGEGCGELQLCQCTPAAAILI*TMLTAT
Trigger: GGTAGCAGTGAGCATTGTTCATATGAGAATGGCGGC...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCCTCTTCCTCTGGCTATaGCTGCTTCCCCTTCGTATT +
Preference number: 4 (lower is better)
Translates to: ESGGEGCGELQLCQCTPALFLWL*LLPLRI
Trigger: AATACGAAGGGGAAGCAGTCATAGCCAGAGGAAGAG...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR GCA 90 bp TGTGGCACCTACCCCCAATCCCCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTAATGTCACTAAATTCTaGCACTCCTGGCGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: CGTYPQSPPLALPLAMTANVTKF*HSWRSL
Trigger: CAGCGACCGCCAGGAGTGGCAGAATTTAGTGACATT...AGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGGGGATTGGGGGTAGGTGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp TATTCTGCCATGAATGAAGTTTCCCGAGGCCTCCCCAGAAGCAGAAGCTGCTATCGGGTAACATCCTGGTaGGGCAGAGGCCCCTACTCG +
Preference number: 4 (lower is better)
Translates to: YSAMNEVSRGLPRSRSCYRVTSW*GRGPYS
Trigger: CGAGTAGGGGCCTCTGCCCCACCAGGATGTTACCCG...ATAGCAGCTTCTGCTTCTGGGGAGGCCTCGGGAAACTTCATTCATGGCAGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp TATTCTGCCATGAATGAAGTTTCCCGAGGCCTCCCCAGAAGCAGAAGCTGCTATAGCCGGGTAACATCCTaGTGGGGCAGAGGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: YSAMNEVSRGLPRSRSCYSRVTS*WGRGPY
Trigger: GTAGGGGCCTCTGCCCCACCAGGATGTTACCCGGCT...ATAGCAGCTTCTGCTTCTGGGGAGGCCTCGGGAAACTTCATTCATGGCAGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCTGTACTTGTTCTGGCTaGATGGACCGCCCTAAGAGT +
Preference number: 4 (lower is better)
Translates to: ESGGEGCGELQLCQCTPACTCSG*MDRPKS
Trigger: ACTCTTAGGGCGGTCCATCCAGCCAGAACAAGTACA...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCCACTCTGAGTGTTTGTaGTCCCTGTCCTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: ESGGEGCGELQLCQCTPAHSECL*SLSFFL
Trigger: CAGAAAGAAGGACAGGGATCACAAACACTCAGAGTG...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR GCA 90 bp TGTGGCACCTACCCCCAATCCCCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTCCCAGAAGCAGAAGCTaGTATGTTTCCTGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: CGTYPQSPPLALPLAMTAPRSRS*YVSCSV
Trigger: GACTGAACAGGAAACATAGCAGCTTCTGCTTCTGGG...AGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGGGGATTGGGGGTAGGTGCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp TGTGGCACCTACCCCCAATCCCCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTACACTGATGCTGTTCTaGAGCGTGGCTTGGTATTTC +
Preference number: 4 (lower is better)
Translates to: CGTYPQSPPLALPLAMTATLMLF*SVAWYF
Trigger: GAAATACCAAGCCACGCTCCAGAACAGCATCAGTGT...AGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGGGGATTGGGGGTAGGTGCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCGTGGCTTTAACATCATaGATTGCCCTTACTGATGGG +
Preference number: 4 (lower is better)
Translates to: ESGGEGCGELQLCQCTPAVALTS*IALTDG
Trigger: CCCATCAGTAAGGGCAATTCATGATGTTAAAGCCAC...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR GCA 90 bp CCCACACCCAAAGAACCTAGGCTGTCATACAGTGGATTGCCTGTTATAGAAGTATTCGCCGCCACAAGCTaGCTGGGTGACCCGGAAACG +
Preference number: 4 (lower is better)
Translates to: PTPKEPRLSYSGLPVIEVFAATS*LGDPET
Trigger: CGTTTCCGGGTCACCCAGGCAGCTTGTGGCGGCGAA...TACTTCTATAACAGGCAATCCACTGTATGACAGCCTAGGTTCTTTGGGTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp GTTTTAAGACACAGATCTCACACAGGCAGTTGGGTCCACATGTTAAGAACTCATACTCCTGGCGGTCGCTaGGATTACAGGCCGCCGCCC +
Preference number: 4 (lower is better)
Translates to: VLRHRSHTGSWVHMLRTHTPGGR*DYRPPP
Trigger: GGGCGGCGGCCTGTAATCCCAGCGACCGCCAGGAGT...ATGAGTTCTTAACATGTGGACCCAACTGCCTGTGTGAGATCTGTGTCTTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCAATGCTGCCAAAGCTTaGCAAATGCAGTCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: ESGGEGCGELQLCQCTPANAAKA*QMQSKK
Trigger: CTTCTTAGACTGCATTTGTCAAGCTTTGGCAGCATT...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp CCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTTCCCCTTCGTATTCTGCCATGTGCTTCACTGACTTCTaGCAGTTTGGCAAATTGGGG +
Preference number: 4 (lower is better)
Translates to: PPLALPLAMTASPSYSAMCFTDF*QFGKLG
Trigger: CCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCA...CATGGCAGAATACGAAGGGGAAGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp CCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTTCCCCTTCGTATTCTGCCATGAGGGAAAAAGTATCCTaGGGGACCAGGACCATCTTA +
Preference number: 4 (lower is better)
Translates to: PPLALPLAMTASPSYSAMREKVS*GTRTIL
Trigger: TAAGATGGTCCTGGTCCCTCAGGATACTTTTTCCCT...CATGGCAGAATACGAAGGGGAAGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCCAGGGTACCAATATATaGATGACTACAGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: ESGGEGCGELQLCQCTPAQGTNI*MTTGNH
Trigger: ATGGTTCCCTGTAGTCATCCATATATTGGTACCCTG...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp CCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTTCCCCTTCGTATTCTGCCATGTGCTGTTCTGGAGCGTaGCTTGGTATTTCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PPLALPLAMTASPSYSAMCCSGA*LGISQE
Trigger: TTCTTGGGAAATACCAAGCCACGCTCCAGAACAGCA...CATGGCAGAATACGAAGGGGAAGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp AGGAATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGCTTGTTCTGGCTGGATaGACCGCCCTAAGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: RNAETMPNKVPTPKEPRLLVLAG*TALRVL
Trigger: AAGCACTCTTAGGGCGGTCCATCCAGCCAGAACAAG...CAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCATTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp TGTGGCACCTACCCCCAATCCCCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTCCACCTTATATAGTTTaGGGACTGCTACTTACAGTG +
Preference number: 4 (lower is better)
Translates to: CGTYPQSPPLALPLAMTAPPYIV*GLLLTV
Trigger: CACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGG...AGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGGGGATTGGGGGTAGGTGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp TGTGGCACCTACCCCCAATCCCCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTTTTGAACAGACTTACTaGTGCCCAATGCTAGTAAAC +
Preference number: 4 (lower is better)
Translates to: CGTYPQSPPLALPLAMTAFEQTY*CPMLVN
Trigger: GTTTACTAGCATTGGGCATCAGTAAGTCTGTTCAAA...AGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGGGGATTGGGGGTAGGTGCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp CCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTTCCCCTTCGTATTCTGCCATGGATGAAGCAATCCCATaGCTCCATGGTACCAAGATA +
Preference number: 4 (lower is better)
Translates to: PPLALPLAMTASPSYSAMDEAIP*LHGTKI
Trigger: TATCTTGGTACCATGGAGTCATGGGATTGCTTCATC...CATGGCAGAATACGAAGGGGAAGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCAGGGGAGACAATCTTTaGATCAACATTTTACCTTCG +
Preference number: 4 (lower is better)
Translates to: ESGGEGCGELQLCQCTPARGDNL*INILPS
Trigger: CGAAGGTAAAATGTTGATTCAAAGATTGTCTCCCCT...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp TGGTACCAAGATAGTCCTGCACCCATCATGAAAATACCAACACCACTAATTAGCCACAAGCTGCCTGGGTaGCCCGGAAACGGCAACGTC +
Preference number: 4 (lower is better)
Translates to: WYQDSPAPIMKIPTPLISHKLPG*PGNGNV
Trigger: GACGTTGCCGTTTCCGGGTCACCCAGGCAGCTTGTG...GCTAATTAGTGGTGTTGGTATTTTCATGATGGGTGCAGGACTATCTTGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR GCA 90 bp TGTGGCACCTACCCCCAATCCCCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTATTTGGAATACCTGCTaGACATTAACTTTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: CGTYPQSPPLALPLAMTAIWNTC*TLTLRV
Trigger: GACCCTCAAAGTTAATGTGCAGCAGGTATTCCAAAT...AGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGGGGATTGGGGGTAGGTGCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp GAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAATGATCCTGGACCAGCTACATCTGTaGGCCGCGGCGGCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: EVHLQQQEVLLLQILMILDQLHL*AAAAAK
Trigger: CTTGGCCGCCGCCGCGGCCCACAGATGTAGCTGGTC...CAGGATCATTAGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp CCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTTCCCCTTCGTATTCTGCCATGAGGTTCTTGCTTAAGTaGAGCTTTGAGTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PPLALPLAMTASPSYSAMRFLLK*SFEFCA
Trigger: GGCACAGAACTCAAAGCTCCACTTAAGCAAGAACCT...CATGGCAGAATACGAAGGGGAAGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp CCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTTCCCCTTCGTATTCTGCCATGTCTCACACAGGCAGTTaGGTCCACATGTTAAGAACT +
Preference number: 4 (lower is better)
Translates to: PPLALPLAMTASPSYSAMSHTGS*VHMLRT
Trigger: AGTTCTTAACATGTGGACCCAACTGCCTGTGTGAGA...CATGGCAGAATACGAAGGGGAAGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp ATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGTCATGCTTCTGCATGGCACTaGGTCTTTCAGTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: MLRPCLIRCPHPKNLGCHASAWH*VFQCRR
Trigger: TCTCCTACACTGAAAGACTCAGTGCCATGCAGAAGC...ATGACAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp CCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTTCCCCTTCGTATTCTGCCATGCCCAAATTCTCTTTTTaGGACAGGATCTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: PPLALPLAMTASPSYSAMPKFSF*DRISLC
Trigger: ACAGAGTGAGATCCTGTCTCAAAAAGAGAATTTGGG...CATGGCAGAATACGAAGGGGAAGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp TGTGGCACCTACCCCCAATCCCCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTGAAAATTTTTCCGTCTaGTCTTATCTCACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: CGTYPQSPPLALPLAMTAENFSV*SYLTGS
Trigger: AGAACCTGTGAGATAAGATCAGACGGAAAAATTTTC...AGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGGGGATTGGGGGTAGGTGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR GCA 90 bp CCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTTCCCCTTCGTATTCTGCCATGACTTGGAGAGGTTCTTaGTTAAGTGGAGCTTTGAGT +
Preference number: 4 (lower is better)
Translates to: PPLALPLAMTASPSYSAMTWRGS*LSGALS
Trigger: ACTCAAAGCTCCACTTAAGCAAGAACCTCTCCAAGT...CATGGCAGAATACGAAGGGGAAGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR GCA 90 bp ATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGTCATGGAATGCTGAGACCATaGCTAATAAGGTGCCCACAC +
Preference number: 4 (lower is better)
Translates to: MLRPCLIRCPHPKNLGCHGMLRP*LIRCPH
Trigger: GTGTGGGCACCTTATTAGGCATGGTCTCAGCATTCC...ATGACAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp AAGGGATTCTATTGGTTGAGGATGAAGCAATCCCATGACTCCATGGTACCAAGAGCCACCGGTACCAACTaGCTCCATAGACTGGACATC +
Preference number: 4 (lower is better)
Translates to: KGFYWLRMKQSHDSMVPRATGTN*LHRLDI
Trigger: GATGTCCAGTCTATGGAGTCAGTTGGTACCGGTGGC...TCTTGGTACCATGGAGTCATGGGATTGCTTCATCCTCAACCAATAGAATCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp TATTCTGCCATGAATGAAGTTTCCCGAGGCCTCCCCAGAAGCAGAAGCTGCTATGAAGGATCTGGTGTTTaGACAGACTTACTGATGCCC +
Preference number: 4 (lower is better)
Translates to: YSAMNEVSRGLPRSRSCYEGSGV*TDLLMP
Trigger: GGGCATCAGTAAGTCTGTTCAAACACCAGATCCTTC...ATAGCAGCTTCTGCTTCTGGGGAGGCCTCGGGAAACTTCATTCATGGCAGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp ATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGTCATGAAGGATCTGGTGTTTaGACAGACTTACTGATGCCC +
Preference number: 4 (lower is better)
Translates to: MLRPCLIRCPHPKNLGCHEGSGV*TDLLMP
Trigger: GGGCATCAGTAAGTCTGTTCAAACACCAGATCCTTC...ATGACAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp GAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAATGATCCTGAGCCGGGTAACATCCTaGTGGGGCAGAGGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: EVHLQQQEVLLLQILMILSRVTS*WGRGPY
Trigger: GTAGGGGCCTCTGCCCCACCAGGATGTTACCCGGCT...CAGGATCATTAGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp GAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAATGATCCTGCCGCCACAAGCTGCCTaGGTGACCCGGAAACGGCAA +
Preference number: 4 (lower is better)
Translates to: EVHLQQQEVLLLQILMILPPQAA*VTRKRQ
Trigger: TTGCCGTTTCCGGGTCACCCAGGCAGCTTGTGGCGG...CAGGATCATTAGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp TATTCTGCCATGAATGAAGTTTCCCGAGGCCTCCCCAGAAGCAGAAGCTGCTATCCCTGTCCTTCTTTCTaGACATTTGTGGAGTACAAC +
Preference number: 4 (lower is better)
Translates to: YSAMNEVSRGLPRSRSCYPCPSF*TFVEYN
Trigger: GTTGTACTCCACAAATGTTCAGAAAGAAGGACAGGG...ATAGCAGCTTCTGCTTCTGGGGAGGCCTCGGGAAACTTCATTCATGGCAGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTTGCCCAGGCTGGTCTTaGCCTCCTGAGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: FYLRFFASLTSDSLANWGCPGWS*PPELKQ
Trigger: TTGCTTGAGCTCAGGAGGTCAAGACCAGCCTGGGCA...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp GCATTCCTACGAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTATCAGCGAACACCGATaGCTTCGCCGCCACAAGCTG +
Preference number: 4 (lower is better)
Translates to: AFLRSSFTATRSVAPSDTISEHR*LRRHKL
Trigger: CAGCTTGTGGCGGCGAAGCCATCGGTGTTCGCTGAT...AGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTCGTAGGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp ATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGTCATAATCCCATGACTCCATaGTACCAAGATAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: MLRPCLIRCPHPKNLGCHNPMTP*YQDSPA
Trigger: TGCAGGACTATCTTGGTACCATGGAGTCATGGGATT...ATGACAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp AGGAATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGTCTTGGGCTCTTACTTaGAGAGGTTCTTGCTTAAGT +
Preference number: 4 (lower is better)
Translates to: RNAETMPNKVPTPKEPRLSWALT*RGSCLS
Trigger: ACTTAAGCAAGAACCTCTCCAAGTAAGAGCCCAAGA...CAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp AGGAATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGCCATTATTCCTTTCTTaGGCTCTTACTTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RNAETMPNKVPTPKEPRLPLFLS*ALTWRG
Trigger: ACCTCTCCAAGTAAGAGCCCAAGAAAGGAATAATGG...CAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp ATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGTCATACAGGGAACCATGTTTaGAAAGCTTCCAAATGTCAC +
Preference number: 4 (lower is better)
Translates to: MLRPCLIRCPHPKNLGCHTGNHV*KASKCH
Trigger: GTGACATTTGGAAGCTTTTCAAACATGGTTCCCTGT...ATGACAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp AAGGGATTCTATTGGTTGAGGATGAAGCAATCCCATGACTCCATGGTACCAAGAAGGTCCCCACCCAGGTaGTTCATTCCATCAAACTCA +
Preference number: 4 (lower is better)
Translates to: KGFYWLRMKQSHDSMVPRRSPPR*FIPSNS
Trigger: TGAGTTTGATGGAATGAATCACCTGGGTGGGGACCT...TCTTGGTACCATGGAGTCATGGGATTGCTTCATCCTCAACCAATAGAATCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR GCA 90 bp AAGGGATTCTATTGGTTGAGGATGAAGCAATCCCATGACTCCATGGTACCAAGAAATGTCACTAAATTCTaGCACTCCTGGCGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: KGFYWLRMKQSHDSMVPRNVTKF*HSWRSL
Trigger: CAGCGACCGCCAGGAGTGGCAGAATTTAGTGACATT...TCTTGGTACCATGGAGTCATGGGATTGCTTCATCCTCAACCAATAGAATCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR GCA 90 bp CCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTTCCCCTTCGTATTCTGCCATGATGAACAATGCTCACTaGTACCTGAACATTTTAAAG +
Preference number: 4 (lower is better)
Translates to: PPLALPLAMTASPSYSAMMNNAH*YLNILK
Trigger: CTTTAAAATGTTCAGGTAGCAGTGAGCATTGTTCAT...CATGGCAGAATACGAAGGGGAAGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp AAGGGATTCTATTGGTTGAGGATGAAGCAATCCCATGACTCCATGGTACCAAGATGTACTTGTTCTGGCTaGATGGACCGCCCTAAGAGT +
Preference number: 4 (lower is better)
Translates to: KGFYWLRMKQSHDSMVPRCTCSG*MDRPKS
Trigger: ACTCTTAGGGCGGTCCATCCAGCCAGAACAAGTACA...TCTTGGTACCATGGAGTCATGGGATTGCTTCATCCTCAACCAATAGAATCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp GCTGTCATACAGTGGATTGCCTGTTATAGAAGTAAGGCCCATGCAAGTGGCTGCGGAAACTTTGTAGAGTaGACGGACAAACTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: AVIQWIACYRSKAHASGCGNFVE*TDKLVS
Trigger: GGAAACAAGTTTGTCCGTCCACTCTACAAAGTTTCC...GCAGCCACTTGCATGGGCCTTACTTCTATAACAGGCAATCCACTGTATGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp TTTCAGTGTAGGAGAGGAGGAAACTTTGTAGAGTGGACGGACAAACTTGTTTCCAGAAGGAATCAATCATaGACCCTTGACTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: FQCRRGGNFVEWTDKLVSRRNQS*TLDCPS
Trigger: GGAGGGGCAGTCAAGGGTCCATGATTGATTCCTTCT...GGAAACAAGTTTGTCCGTCCACTCTACAAAGTTTCCTCCTCTCCTACACTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp CCCACACCCAAAGAACCTAGGCTGTCATACAGTGGATTGCCTGTTATAGAAGTACCCTGTCCTTCTTTCTaGACATTTGTGGAGTACAAC +
Preference number: 4 (lower is better)
Translates to: PTPKEPRLSYSGLPVIEVPCPSF*TFVEYN
Trigger: GTTGTACTCCACAAATGTTCAGAAAGAAGGACAGGG...TACTTCTATAACAGGCAATCCACTGTATGACAGCCTAGGTTCTTTGGGTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp ATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGTCATATTCTGAGTGTACTTTaGGCCATACTCCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: MLRPCLIRCPHPKNLGCHILSVL*AILPFL
Trigger: AAGAAAAGGGAGTATGGCTCAAAGTACACTCAGAAT...ATGACAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp GCTGTCATACAGTGGATTGCCTGTTATAGAAGTAAGGCCCATGCAAGTGGCTGCTTTGAACAGACTTACTaGTGCCCAATGCTAGTAAAC +
Preference number: 4 (lower is better)
Translates to: AVIQWIACYRSKAHASGCFEQTY*CPMLVN
Trigger: GTTTACTAGCATTGGGCATCAGTAAGTCTGTTCAAA...GCAGCCACTTGCATGGGCCTTACTTCTATAACAGGCAATCCACTGTATGACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR GCA 90 bp TTTCAGTGTAGGAGAGGAGGAAACTTTGTAGAGTGGACGGACAAACTTGTTTCCCCATGCCTAATAAGGTaGCCACACCCAAAGAACCTA +
Preference number: 4 (lower is better)
Translates to: FQCRRGGNFVEWTDKLVSPCLIR*PHPKNL
Trigger: TAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGG...GGAAACAAGTTTGTCCGTCCACTCTACAAAGTTTCCTCCTCTCCTACACTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264451.12
ENST00000513699.5
CDS-3UTR CCA 90 bp TTTCAGTGTAGGAGAGGAGGAAACTTTGTAGAGTGGACGGACAAACTTGTTTCCACTGACTCCATAGACTaGACATCAGCGAACACCGAT +
Preference number: 4 (lower is better)
Translates to: FQCRRGGNFVEWTDKLVSTDSID*TSANTD
Trigger: ATCGGTGTTCGCTGATGTCCAGTCTATGGAGTCAGT...GGAAACAAGTTTGTCCGTCCACTCTACAAAGTTTCCTCCTCTCCTACACTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264451.12
ENST00000513699.5
CDS-3UTR CCA 90 bp GCATTCCTACGAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAAATTCTGCCACTCCTaGCGGTCGCTGGGATTACAG +
Preference number: 4 (lower is better)
Translates to: AFLRSSFTATRSVAPSDTKFCHS*RSLGLQ
Trigger: CTGTAATCCCAGCGACCGCCAGGAGTGGCAGAATTT...AGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTCGTAGGAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp GCCTGTTATAGAAGTAAGGCCCATGCAAGTGGCTGCTATTATAACTCCCAAGACTTCTGGAGCGTGGCTTaGTATTTCCCAAGAAATCTC +
Preference number: 4 (lower is better)
Translates to: ACYRSKAHASGCYYNSQDFWSVA*YFPRNL
Trigger: GAGATTTCTTGGGAAATACCAAGCCACGCTCCAGAA...GTCTTGGGAGTTATAATAGCAGCCACTTGCATGGGCCTTACTTCTATAACAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp AAGGGATTCTATTGGTTGAGGATGAAGCAATCCCATGACTCCATGGTACCAAGATGCTGTTCTGGAGCGTaGCTTGGTATTTCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: KGFYWLRMKQSHDSMVPRCCSGA*LGISQE
Trigger: TTCTTGGGAAATACCAAGCCACGCTCCAGAACAGCA...TCTTGGTACCATGGAGTCATGGGATTGCTTCATCCTCAACCAATAGAATCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp TATTCTGCCATGAATGAAGTTTCCCGAGGCCTCCCCAGAAGCAGAAGCTGCTATAGTTCTCATGAGATCTaGTTGTTTACAAGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: YSAMNEVSRGLPRSRSCYSSHEI*LFTRVW
Trigger: CCACACTCTTGTAAACAACCAGATCTCATGAGAACT...ATAGCAGCTTCTGCTTCTGGGGAGGCCTCGGGAAACTTCATTCATGGCAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp TGGTACCAAGATAGTCCTGCACCCATCATGAAAATACCAACACCACTAATTAGCCACTCTGAGTGTTTGTaGTCCCTGTCCTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: WYQDSPAPIMKIPTPLISHSECL*SLSFFL
Trigger: CAGAAAGAAGGACAGGGATCACAAACACTCAGAGTG...GCTAATTAGTGGTGTTGGTATTTTCATGATGGGTGCAGGACTATCTTGGTACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp TGGTACCAAGATAGTCCTGCACCCATCATGAAAATACCAACACCACTAATTAGCATGAATTGCCCTTACTaGTGGGTCATTCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: WYQDSPAPIMKIPTPLISMNCPY*WVILQE
Trigger: CTCCTGGAGAATGACCCATCAGTAAGGGCAATTCAT...GCTAATTAGTGGTGTTGGTATTTTCATGATGGGTGCAGGACTATCTTGGTACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp TTTCAGTGTAGGAGAGGAGGAAACTTTGTAGAGTGGACGGACAAACTTGTTTCCGTGGCTTTAACATCATaGATTGCCCTTACTGATGGG +
Preference number: 4 (lower is better)
Translates to: FQCRRGGNFVEWTDKLVSVALTS*IALTDG
Trigger: CCCATCAGTAAGGGCAATTCATGATGTTAAAGCCAC...GGAAACAAGTTTGTCCGTCCACTCTACAAAGTTTCCTCCTCTCCTACACTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264451.12
ENST00000513699.5
CDS-3UTR TCA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTAGGTCCCCACCCAGGTaGTTCATTCCATCAAACTCA +
Preference number: 4 (lower is better)
Translates to: FYLRFFASLTSDSLANWGRSPPR*FIPSNS
Trigger: TGAGTTTGATGGAATGAATCACCTGGGTGGGGACCT...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp AACTGTGCCACCTTATATAGTTTGGGGACTGCTACTTACAGTGAATTAGAGATCGCTTCTGCATGGCACTaGGTCTTTCAGTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: NCATLYSLGTATYSELEIASAWH*VFQCRR
Trigger: TCTCCTACACTGAAAGACTCAGTGCCATGCAGAAGC...GATCTCTAATTCACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGGCACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR GCA 90 bp TGGTACCAAGATAGTCCTGCACCCATCATGAAAATACCAACACCACTAATTAGCCCATGCCTAATAAGGTaGCCACACCCAAAGAACCTA +
Preference number: 4 (lower is better)
Translates to: WYQDSPAPIMKIPTPLISPCLIR*PHPKNL
Trigger: TAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGG...GCTAATTAGTGGTGTTGGTATTTTCATGATGGGTGCAGGACTATCTTGGTACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp CCCACACCCAAAGAACCTAGGCTGTCATACAGTGGATTGCCTGTTATAGAAGTACAGGGTACCAATATATaGATGACTACAGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: PTPKEPRLSYSGLPVIEVQGTNI*MTTGNH
Trigger: ATGGTTCCCTGTAGTCATCCATATATTGGTACCCTG...TACTTCTATAACAGGCAATCCACTGTATGACAGCCTAGGTTCTTTGGGTGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp AAGGGATTCTATTGGTTGAGGATGAAGCAATCCCATGACTCCATGGTACCAAGAAGGTTCTTGCTTAAGTaGAGCTTTGAGTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: KGFYWLRMKQSHDSMVPRRFLLK*SFEFCA
Trigger: GGCACAGAACTCAAAGCTCCACTTAAGCAAGAACCT...TCTTGGTACCATGGAGTCATGGGATTGCTTCATCCTCAACCAATAGAATCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp TGGTACCAAGATAGTCCTGCACCCATCATGAAAATACCAACACCACTAATTAGCACACTGATGCTGTTCTaGAGCGTGGCTTGGTATTTC +
Preference number: 4 (lower is better)
Translates to: WYQDSPAPIMKIPTPLISTLMLF*SVAWYF
Trigger: GAAATACCAAGCCACGCTCCAGAACAGCATCAGTGT...GCTAATTAGTGGTGTTGGTATTTTCATGATGGGTGCAGGACTATCTTGGTACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTGCCACCGGTACCAACTaGCTCCATAGACTGGACATC +
Preference number: 4 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTATGTN*LHRLDI
Trigger: GATGTCCAGTCTATGGAGTCAGTTGGTACCGGTGGC...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp TTTCAGTGTAGGAGAGGAGGAAACTTTGTAGAGTGGACGGACAAACTTGTTTCCCTAGATCACTGGATTTaGGGCAGAACTCATTTATCG +
Preference number: 4 (lower is better)
Translates to: FQCRRGGNFVEWTDKLVSLDHWI*GRTHLS
Trigger: CGATAAATGAGTTCTGCCTCAAATCCAGTGATCTAG...GGAAACAAGTTTGTCCGTCCACTCTACAAAGTTTCCTCCTCTCCTACACTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264451.12
ENST00000513699.5
CDS-3UTR TCA 90 bp TGGTACCAAGATAGTCCTGCACCCATCATGAAAATACCAACACCACTAATTAGCGATGAAGCAATCCCATaGCTCCATGGTACCAAGATA +
Preference number: 4 (lower is better)
Translates to: WYQDSPAPIMKIPTPLISDEAIP*LHGTKI
Trigger: TATCTTGGTACCATGGAGTCATGGGATTGCTTCATC...GCTAATTAGTGGTGTTGGTATTTTCATGATGGGTGCAGGACTATCTTGGTACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTATGAATTGCCCTTACTaGTGGGTCATTCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FYLRFFASLTSDSLANWGMNCPY*WVILQE
Trigger: CTCCTGGAGAATGACCCATCAGTAAGGGCAATTCAT...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR GCA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTGCCCATGCAAGTGGCTaGTATTATAACTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: FYLRFFASLTSDSLANWGAHASG*YYNSQD
Trigger: GTCTTGGGAGTTATAATAGCAGCCACTTGCATGGGC...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR GCA 90 bp CTTAGCACTCAGGTCAAAATCACAAGGTATGGAGAAATAATTTCCACATTCTATCCAATCCCCGCCTCTTaGTCTTCCTCTGGCTATGAC +
Preference number: 4 (lower is better)
Translates to: LSTQVKITRYGEIISTFYPIPAS*SSSGYD
Trigger: GTCATAGCCAGAGGAAGAGCAAGAGGCGGGGATTGG...ATAGAATGTGGAAATTATTTCTCCATACCTTGTGATTTTGACCTGAGTGCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp GCATTCCTACGAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTGTACTTTTTCCACTCTaGGTGTTTGTGATCCCTGTC +
Preference number: 4 (lower is better)
Translates to: AFLRSSFTATRSVAPSDTVLFPL*VFVIPV
Trigger: GACAGGGATCACAAACACTCAGAGTGGAAAAAGTAC...AGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTCGTAGGAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp GCATTCCTACGAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTGGGGACTTCGTCGTCTaGTTTTTCGAAGTTGTTCTA +
Preference number: 4 (lower is better)
Translates to: AFLRSSFTATRSVAPSDTGDFVV*FFEVVL
Trigger: TAGAACAACTTCGAAAAATCAGACGACGAAGTCCCC...AGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTCGTAGGAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp TTTCAGTGTAGGAGAGGAGGAAACTTTGTAGAGTGGACGGACAAACTTGTTTCCTACATACTTGTAAAATaGCATTCCTTTAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: FQCRRGGNFVEWTDKLVSYILVK*HSFSPS
Trigger: GCTCGGGCTAAAGGAATGTCATTTTACAAGTATGTA...GGAAACAAGTTTGTCCGTCCACTCTACAAAGTTTCCTCCTCTCCTACACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264451.12
ENST00000513699.5
CDS-3UTR TCA 90 bp CCCACACCCAAAGAACCTAGGCTGTCATACAGTGGATTGCCTGTTATAGAAGTATTGTTTTTCCAAATATaGTCTTGTAACAACTCGCCC +
Preference number: 4 (lower is better)
Translates to: PTPKEPRLSYSGLPVIEVLFFQI*SCNNSP
Trigger: GGGCGAGTTGTTACAAGATCATATTTGGAAAAACAA...TACTTCTATAACAGGCAATCCACTGTATGACAGCCTAGGTTCTTTGGGTGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp TTTCAGTGTAGGAGAGGAGGAAACTTTGTAGAGTGGACGGACAAACTTGTTTCCAAGTACAGTATACACTaGACAGGTGAAATATGGGAC +
Preference number: 4 (lower is better)
Translates to: FQCRRGGNFVEWTDKLVSKYSIH*TGEIWD
Trigger: GTCCCATATTTCACCTGTTCAGTGTATACTGTACTT...GGAAACAAGTTTGTCCGTCCACTCTACAAAGTTTCCTCCTCTCCTACACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR GCA 90 bp GAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAATGATCCTGGCCCATGCAAGTGGCTaGTATTATAACTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: EVHLQQQEVLLLQILMILAHASG*YYNSQD
Trigger: GTCTTGGGAGTTATAATAGCAGCCACTTGCATGGGC...CAGGATCATTAGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR GCA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTCCCTCATCCTCCCACTaGCATGATGAAAACTGTGCC +
Preference number: 4 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTPSSSH*HDENCA
Trigger: GGCACAGTTTTCATCATGGCAGTGGGAGGATGAGGG...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp CTTAGCACTCAGGTCAAAATCACAAGGTATGGAGAAATAATTTCCACATTCTATAAATTCTGCCACTCCTaGCGGTCGCTGGGATTACAG +
Preference number: 4 (lower is better)
Translates to: LSTQVKITRYGEIISTFYKFCHS*RSLGLQ
Trigger: CTGTAATCCCAGCGACCGCCAGGAGTGGCAGAATTT...ATAGAATGTGGAAATTATTTCTCCATACCTTGTGATTTTGACCTGAGTGCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp AACTGTGCCACCTTATATAGTTTGGGGACTGCTACTTACAGTGAATTAGAGATCTTCTGGAGCGTGGCTTaGTATTTCCCAAGAAATCTC +
Preference number: 4 (lower is better)
Translates to: NCATLYSLGTATYSELEIFWSVA*YFPRNL
Trigger: GAGATTTCTTGGGAAATACCAAGCCACGCTCCAGAA...GATCTCTAATTCACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGGCACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTAATCCCATGACTCCATaGTACCAAGATAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FYLRFFASLTSDSLANWGNPMTP*YQDSPA
Trigger: TGCAGGACTATCTTGGTACCATGGAGTCATGGGATT...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTACAGGGAACCATGTTTaGAAAGCTTCCAAATGTCAC +
Preference number: 4 (lower is better)
Translates to: FYLRFFASLTSDSLANWGTGNHV*KASKCH
Trigger: GTGACATTTGGAAGCTTTTCAAACATGGTTCCCTGT...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp GTTTTAAGACACAGATCTCACACAGGCAGTTGGGTCCACATGTTAAGAACTCATGTACCAATATATGGATaGCTACAGGGAACCATGTTT +
Preference number: 4 (lower is better)
Translates to: VLRHRSHTGSWVHMLRTHVPIYG*LQGTMF
Trigger: AAACATGGTTCCCTGTAGTCATCCATATATTGGTAC...ATGAGTTCTTAACATGTGGACCCAACTGCCTGTGTGAGATCTGTGTCTTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp GCATTCCTACGAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTCTAGATCACTGGATTTaGGGCAGAACTCATTTATCG +
Preference number: 4 (lower is better)
Translates to: AFLRSSFTATRSVAPSDTLDHWI*GRTHLS
Trigger: CGATAAATGAGTTCTGCCTCAAATCCAGTGATCTAG...AGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTCGTAGGAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp AAGGGATTCTATTGGTTGAGGATGAAGCAATCCCATGACTCCATGGTACCAAGAAGCAGTTTAATCCATTaGTGCAAATTGCAACCATCA +
Preference number: 4 (lower is better)
Translates to: KGFYWLRMKQSHDSMVPRSSLIH*CKLQPS
Trigger: TGATGGTTGCAATTTGCATCAATGGATTAAACTGCT...TCTTGGTACCATGGAGTCATGGGATTGCTTCATCCTCAACCAATAGAATCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp TTTCAGTGTAGGAGAGGAGGAAACTTTGTAGAGTGGACGGACAAACTTGTTTCCTTGTTTTTCCAAATATaGTCTTGTAACAACTCGCCC +
Preference number: 4 (lower is better)
Translates to: FQCRRGGNFVEWTDKLVSLFFQI*SCNNSP
Trigger: GGGCGAGTTGTTACAAGATCATATTTGGAAAAACAA...GGAAACAAGTTTGTCCGTCCACTCTACAAAGTTTCCTCCTCTCCTACACTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264451.12
ENST00000513699.5
CDS-3UTR GCA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTGGAATGCTGAGACCATaGCTAATAAGGTGCCCACAC +
Preference number: 4 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTGMLRP*LIRCPH
Trigger: GTGTGGGCACCTTATTAGGCATGGTCTCAGCATTCC...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp GAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAATGATCCTGGACTCAGTATCTTCATaGGGACTTCGTCGTCTGATT +
Preference number: 4 (lower is better)
Translates to: EVHLQQQEVLLLQILMILDSVSS*GLRRLI
Trigger: AATCAGACGACGAAGTCCCCATGAAGATACTGAGTC...CAGGATCATTAGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp AACTGTGCCACCTTATATAGTTTGGGGACTGCTACTTACAGTGAATTAGAGATCCGGATGAGAAGGATCTaGTGTTTGAACAGACTTACT +
Preference number: 4 (lower is better)
Translates to: NCATLYSLGTATYSELEIRMRRI*CLNRLT
Trigger: AGTAAGTCTGTTCAAACACCAGATCCTTCTCATCCG...GATCTCTAATTCACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGGCACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp GCATTCCTACGAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTCGGATGAGAAGGATCTaGTGTTTGAACAGACTTACT +
Preference number: 4 (lower is better)
Translates to: AFLRSSFTATRSVAPSDTRMRRI*CLNRLT
Trigger: AGTAAGTCTGTTCAAACACCAGATCCTTCTCATCCG...AGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTCGTAGGAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp AACTGTGCCACCTTATATAGTTTGGGGACTGCTACTTACAGTGAATTAGAGATCATTCTGAGTGTACTTTaGGCCATACTCCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: NCATLYSLGTATYSELEIILSVL*AILPFL
Trigger: AAGAAAAGGGAGTATGGCTCAAAGTACACTCAGAAT...GATCTCTAATTCACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGGCACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp GTTTTAAGACACAGATCTCACACAGGCAGTTGGGTCCACATGTTAAGAACTCATAGCAGTTTAATCCATTaGTGCAAATTGCAACCATCA +
Preference number: 4 (lower is better)
Translates to: VLRHRSHTGSWVHMLRTHSSLIH*CKLQPS
Trigger: TGATGGTTGCAATTTGCATCAATGGATTAAACTGCT...ATGAGTTCTTAACATGTGGACCCAACTGCCTGTGTGAGATCTGTGTCTTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp GCATTCCTACGAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTTACATACTTGTAAAATaGCATTCCTTTAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: AFLRSSFTATRSVAPSDTYILVK*HSFSPS
Trigger: GCTCGGGCTAAAGGAATGTCATTTTACAAGTATGTA...AGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTCGTAGGAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR TCA 90 bp GTTTTAAGACACAGATCTCACACAGGCAGTTGGGTCCACATGTTAAGAACTCATCCTAAAAGAGTGTACTaGGATGTCTTCATTCAATTC +
Preference number: 4 (lower is better)
Translates to: VLRHRSHTGSWVHMLRTHPKRVY*DVFIQF
Trigger: GAATTGAATGAAGACATCTCAGTACACTCTTTTAGG...ATGAGTTCTTAACATGTGGACCCAACTGCCTGTGTGAGATCTGTGTCTTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTGACTGCTACTTACAGTaGATTAGAGATCCATTCTCA +
Preference number: 4 (lower is better)
Translates to: FYLRFFASLTSDSLANWGDCYLQ*IRDPFS
Trigger: TGAGAATGGATCTCTAATTCACTGTAAGTAGCAGTC...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTACTGACTCCATAGACTaGACATCAGCGAACACCGAT +
Preference number: 4 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTTDSID*TSANTD
Trigger: ATCGGTGTTCGCTGATGTCCAGTCTATGGAGTCAGT...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTCATCACACTGGCCCATaGAAATATCTAGGACTATAT +
Preference number: 4 (lower is better)
Translates to: FYLRFFASLTSDSLANWGHHTGP*KYLGLY
Trigger: ATATAGTCCTAGATATTTCCATGGGCCAGTGTGATG...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
3UTR CAA 72 bp CCAGTAAGTTTTAAGACACAGATCTCACACAGGCAGTaGGGTCCACATGTTAAGAACTCATTAATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: PVSFKTQISHRQ*GPHVKNSLIQQ
Trigger: TTGCTGAATTAATGAGTTCTTAACATGTGGACCCAACTGCCTGTGTGAGATCTGTGTCTTAAAACTTACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTGTACTTTTTCCACTCTaGGTGTTTGTGATCCCTGTC +
Preference number: 4 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTVLFPL*VFVIPV
Trigger: GACAGGGATCACAAACACTCAGAGTGGAAAAAGTAC...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTGGGGACTTCGTCGTCTaGTTTTTCGAAGTTGTTCTA +
Preference number: 4 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTGDFVV*FFEVVL
Trigger: TAGAACAACTTCGAAAAATCAGACGACGAAGTCCCC...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTCATATGGCAATGACATaGAGTAATAAATGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: FYLRFFASLTSDSLANWGHMAMT*SNKWQV
Trigger: CACTTGCCATTTATTACTTCATGTCATTGCCATATG...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR GCA 90 bp GAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAATGATCCTGTCCATTGATGCAAATTaGAACCATCACCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: EVHLQQQEVLLLQILMILSIDAN*NHHHFS
Trigger: GGAAAAGTGGTGATGGTTGCAATTTGCATCAATGGA...CAGGATCATTAGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR GCA 90 bp AACTGTGCCACCTTATATAGTTTGGGGACTGCTACTTACAGTGAATTAGAGATCTTCTCATATGAACAATaGTCACTGCTACCTGAACAT +
Preference number: 4 (lower is better)
Translates to: NCATLYSLGTATYSELEIFSYEQ*SLLPEH
Trigger: ATGTTCAGGTAGCAGTGAGCATTGTTCATATGAGAA...GATCTCTAATTCACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGGCACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp AACTGTGCCACCTTATATAGTTTGGGGACTGCTACTTACAGTGAATTAGAGATCGCTTTAACTCTTACTTaGAGAGGTTCTTGCTTAAGT +
Preference number: 4 (lower is better)
Translates to: NCATLYSLGTATYSELEIALTLT*RGSCLS
Trigger: ACTTAAGCAAGAACCTCTCCAAGTAAGAGTTAAAGC...GATCTCTAATTCACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGGCACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTGACTCAGTATCTTCATaGGGACTTCGTCGTCTGATT +
Preference number: 4 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTDSVSS*GLRRLI
Trigger: AATCAGACGACGAAGTCCCCATGAAGATACTGAGTC...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp GAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAATGATCCTGGAGTACAACTTTACTTaGCTCAGGGTACCAATATAT +
Preference number: 4 (lower is better)
Translates to: EVHLQQQEVLLLQILMILEYNFT*LRVPIY
Trigger: ATATATTGGTACCCTGAGTCAAGTAAAGTTGTACTC...CAGGATCATTAGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CCA 90 bp CTTAGCACTCAGGTCAAAATCACAAGGTATGGAGAAATAATTTCCACATTCTATGATGCTGATATGCTTTaGATCTTTGTCCCCACCAAA +
Preference number: 4 (lower is better)
Translates to: LSTQVKITRYGEIISTFYDADML*IFVPTK
Trigger: TTTGGTGGGGACAAAGATCCAAAGCATATCAGCATC...ATAGAATGTGGAAATTATTTCTCCATACCTTGTGATTTTGACCTGAGTGCTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp AACTGTGCCACCTTATATAGTTTGGGGACTGCTACTTACAGTGAATTAGAGATCGACAGTTTGGCAAATTaGGGTTCATCACATTTAAAA +
Preference number: 4 (lower is better)
Translates to: NCATLYSLGTATYSELEIDSLAN*GSSHLK
Trigger: TTTTAAATGTGATGAACCCCAATTTGCCAAACTGTC...GATCTCTAATTCACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGGCACAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR GCA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTTCCATTGATGCAAATTaGAACCATCACCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTSIDAN*NHHHFS
Trigger: GGAAAAGTGGTGATGGTTGCAATTTGCATCAATGGA...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR GCA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTACCATTTGGAATACCTaGTGCACATTAACTTTGAGG +
Preference number: 4 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTTIWNT*CTLTLR
Trigger: CCTCAAAGTTAATGTGCAGCAGGTATTCCAAATGGT...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CCA 90 bp CTTAGCACTCAGGTCAAAATCACAAGGTATGGAGAAATAATTTCCACATTCTATAAAAAGTCATCACACTaGCCCATGGAAATATCTAGG +
Preference number: 4 (lower is better)
Translates to: LSTQVKITRYGEIISTFYKKSSH*PMEISR
Trigger: CCTAGATATTTCCATGGGCCAGTGTGATGACTTTTT...ATAGAATGTGGAAATTATTTCTCCATACCTTGTGATTTTGACCTGAGTGCTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTGAGTACAACTTTACTTaGCTCAGGGTACCAATATAT +
Preference number: 4 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTEYNFT*LRVPIY
Trigger: ATATATTGGTACCCTGAGTCAAGTAAAGTTGTACTC...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR TCA 90 bp CTTAGCACTCAGGTCAAAATCACAAGGTATGGAGAAATAATTTCCACATTCTATGACTTTGAAACGGAGTaGCTGTTTAAAAACCACATA +
Preference number: 4 (lower is better)
Translates to: LSTQVKITRYGEIISTFYDFETE*LFKNHI
Trigger: TATGTGGTTTTTAAACAGTCACTCCGTTTCAAAGTC...ATAGAATGTGGAAATTATTTCTCCATACCTTGTGATTTTGACCTGAGTGCTAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR GCA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTTTTGATGATGACAGCTaGAGCTTTTCACCACATTTT +
Preference number: 4 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTFDDDS*SFSPHF
Trigger: AAAATGTGGTGAAAAGCTGCAGCTGTCATCATCAAA...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS CCA 90 bp TACATCTGTGGGCCGCGGCGGCGGCCAAGCCGGGTAACATCCTGGTaGGGCAGAGGCCCCTACTCGGACACCGCCTTCTGCCTCCGCGCC +
Preference number: 5 (lower is better)
Translates to: YICGPRRRPSRVTSW*GRGPYSDTAFCLRA
Trigger: GGCGCGGAGGCAGAAGGCGGTGTCCGAGTAGGGGCCTCTGCCCCACCAGGATGTTACCCGGCTTGGCCGCCGCCGCGGCCCACAGATGTA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264451.12
ENST00000510460.1
ENST00000513699.5
CDS CCA 90 bp AGCTACATCTGTGGGCCGCGGCGGCGGCCAAGCCGGGTAACATCCTaGTGGGGCAGAGGCCCCTACTCGGACACCGCCTTCTGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: SYICGPRRRPSRVTS*WGRGPYSDTAFCLR
Trigger: GCGGAGGCAGAAGGCGGTGTCCGAGTAGGGGCCTCTGCCCCACCAGGATGTTACCCGGCTTGGCCGCCGCCGCGGCCCACAGATGTAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264451.12
ENST00000510460.1
ENST00000513699.5
CDS CCA 90 bp CTGCATCGCAGACGGAGCCGGCACAGGGAGGACCAGCTACATCTGTaGGCCGCGGCGGCGGCCAAGCCGGGTAACATCCTGGTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: LHRRRSRHREDQLHL*AAAAAKPGNILVGQ
Trigger: CTGCCCCACCAGGATGTTACCCGGCTTGGCCGCCGCCGCGGCCCACAGATGTAGCTGGTCCTCCCTGTGCCGGCTCCGTCTGCGATGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264451.12
ENST00000510460.1
ENST00000513699.5
CDS GCA 90 bp AATTCTGCCACTCCTGGCGGTCGCTGGGATTACAGGCCGCCGCCCTaGATCGCAGACGGAGCCGGCACAGGGAGGACCAGCTACATCTGT +
Preference number: 5 (lower is better)
Translates to: NSATPGGRWDYRPPP*IADGAGTGRTSYIC
Trigger: ACAGATGTAGCTGGTCCTCCCTGTGCCGGCTCCGTCTGCGATGCAGGGCGGCGGCCTGTAATCCCAGCGACCGCCAGGAGTGGCAGAATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264451.12
ENST00000510460.1
ENST00000513699.5
CDS TCA 90 bp TACTCGGACACCGCCTTCTGCCTCCGCGCCGCCACCGGTACCAACTaGCTCCATAGACTGGACATCAGCGAACACCGATGGCTTCGCCGC +
Preference number: 5 (lower is better)
Translates to: YSDTAFCLRAATGTN*LHRLDISEHRWLRR
Trigger: GCGGCGAAGCCATCGGTGTTCGCTGATGTCCAGTCTATGGAGTCAGTTGGTACCGGTGGCGGCGCGGAGGCAGAAGGCGGTGTCCGAGTA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264451.12
ENST00000510460.1
ENST00000513699.5
CDS CCA 90 bp CCTTCTGCCTCCGCGCCGCCACCGGTACCAACTGACTCCATAGACTaGACATCAGCGAACACCGATGGCTTCGCCGCCACAAGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: PSASAPPPVPTDSID*TSANTDGFAATSCL
Trigger: CAGGCAGCTTGTGGCGGCGAAGCCATCGGTGTTCGCTGATGTCCAGTCTATGGAGTCAGTTGGTACCGGTGGCGGCGCGGAGGCAGAAGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510460.1
ENST00000513699.5
CDS-3UTR CAA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCTGTAATCCCAGCACTTaGGGAAGCCGAGGAGGGCGG +
Preference number: 5 (lower is better)
Translates to: ESGGEGCGELQLCQCTPACNPST*GSRGGR
Trigger: CCGCCCTCCTCGGCTTCCCAAAGTGCTGGGATTACA...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp TGTGGCACCTACCCCCAATCCCCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTAGTGGACGGACAAACTaGTTTCCAAGGTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: CGTYPQSPPLALPLAMTASGRTN*FPRSPP
Trigger: GGGTGGGGACCTTGGAAACAAGTTTGTCCGTCCACT...AGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGGGGATTGGGGGTAGGTGCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCGAGTTCAGTGAGCCGTaGTACTTGTTCTGGCTGGAT +
Preference number: 5 (lower is better)
Translates to: ESGGEGCGELQLCQCTPAEFSEP*YLFWLD
Trigger: ATCCAGCCAGAACAAGTACAACGGCTCACTGAACTC...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCCAGGAACTTACCTCTTaGGAGTTGGATACTATAGGC +
Preference number: 5 (lower is better)
Translates to: ESGGEGCGELQLCQCTPAQELTS*ELDTIG
Trigger: GCCTATAGTATCCAACTCCAAAGAGGTAAGTTCCTG...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp GAATCGGGAGGTGAAGGTTGCGGTGAGCTGCAATTGTGCCAGTGCACTCCAGCCATATGCTTTGGATCTTaGTCCCCACCAAATCTCATG +
Preference number: 5 (lower is better)
Translates to: ESGGEGCGELQLCQCTPAICFGS*SPPNLM
Trigger: CATGAGATTTGGTGGGGACAAAGATCCAAAGCATAT...GGCTGGAGTGCACTGGCACAATTGCAGCTCACCGCAACCTTCACCTCCCGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp CCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTTCCCCTTCGTATTCTGCCATGTGCTTAAGTGGAGCTTaGAGTTCTGTGCCTATACCT +
Preference number: 5 (lower is better)
Translates to: PPLALPLAMTASPSYSAMCLSGA*SSVPIP
Trigger: AGGTATAGGCACAGAACTCAAAGCTCCACTTAAGCA...CATGGCAGAATACGAAGGGGAAGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp TGTGGCACCTACCCCCAATCCCCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTTATTCTGAGTGTACTTaGAGCCATACTCCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: CGTYPQSPPLALPLAMTAYSECT*SHTPFS
Trigger: AGAAAAGGGAGTATGGCTCAAAGTACACTCAGAATA...AGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGGGGATTGGGGGTAGGTGCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp CCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTTCCCCTTCGTATTCTGCCATGTCTCATGAGATCTGGTaGTTTACAAGAGTGTGGCAC +
Preference number: 5 (lower is better)
Translates to: PPLALPLAMTASPSYSAMSHEIW*FTRVWH
Trigger: GTGCCACACTCTTGTAAACAACCAGATCTCATGAGA...CATGGCAGAATACGAAGGGGAAGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp TGTGGCACCTACCCCCAATCCCCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTAAATATAGCGCATATTaGAAAATCCGTACGGATGAG +
Preference number: 5 (lower is better)
Translates to: CGTYPQSPPLALPLAMTAKYSAY*KIRTDE
Trigger: CTCATCCGTACGGATTTTCAAATATGCGCTATATTT...AGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGGGGATTGGGGGTAGGTGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp GCCTGTTATAGAAGTAAGGCCCATGCAAGTGGCTGCTATTATAACTCCCAAGACAGTGAGCCGTTGTACTaGTTCTGGCTGGATGGACCG +
Preference number: 5 (lower is better)
Translates to: ACYRSKAHASGCYYNSQDSEPLY*FWLDGP
Trigger: CGGTCCATCCAGCCAGAACAAGTACAACGGCTCACT...GTCTTGGGAGTTATAATAGCAGCCACTTGCATGGGCCTTACTTCTATAACAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp GCTGTCATACAGTGGATTGCCTGTTATAGAAGTAAGGCCCATGCAAGTGGCTGCGTTCTGGAGCGTGGCTaGGTATTTCCCAAGAAATCT +
Preference number: 5 (lower is better)
Translates to: AVIQWIACYRSKAHASGCVLERG*VFPKKS
Trigger: AGATTTCTTGGGAAATACCAAGCCACGCTCCAGAAC...GCAGCCACTTGCATGGGCCTTACTTCTATAACAGGCAATCCACTGTATGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp ATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGTCATAGAAGGATCTGGTGTTaGAACAGACTTACTGATGCC +
Preference number: 5 (lower is better)
Translates to: MLRPCLIRCPHPKNLGCHRRIWC*NRLTDA
Trigger: GGCATCAGTAAGTCTGTTCAAACACCAGATCCTTCT...ATGACAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp AGGAATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGCTGTCATACAGTGGATaGCCTGTTATAGAAGTAAGG +
Preference number: 5 (lower is better)
Translates to: RNAETMPNKVPTPKEPRLLSYSG*PVIEVR
Trigger: CCTTACTTCTATAACAGGCAATCCACTGTATGACAG...CAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp CCGCCTCTTGCTCTTCCTCTGGCTATGACTGCTTCCCCTTCGTATTCTGCCATGCAACATGGAGAAACCTaGTCTAAACCAGAAATACAA +
Preference number: 5 (lower is better)
Translates to: PPLALPLAMTASPSYSAMQHGET*SKPEIQ
Trigger: TTGTATTTCTGGTTTAGACAAGGTTTCTCCATGTTG...CATGGCAGAATACGAAGGGGAAGCAGTCATAGCCAGAGGAAGAGCAAGAGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp AGGAATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGTACAGGGAACCATGTTaGAAAAGCTTCCAAATGTCA +
Preference number: 5 (lower is better)
Translates to: RNAETMPNKVPTPKEPRLYREPC*KSFQMS
Trigger: TGACATTTGGAAGCTTTTCAAACATGGTTCCCTGTA...CAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp AGGAATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGTATTCTGAGTGTACTTaGAGCCATACTCCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: RNAETMPNKVPTPKEPRLYSECT*SHTPFS
Trigger: AGAAAAGGGAGTATGGCTCAAAGTACACTCAGAATA...CAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp GCATTCCTACGAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAGTGGACGGACAAACTaGTTTCCAAGGTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: AFLRSSFTATRSVAPSDTSGRTN*FPRSPP
Trigger: GGGTGGGGACCTTGGAAACAAGTTTGTCCGTCCACT...AGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTCGTAGGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTCATGATCATAGCTCATaGCAGCCTCGACCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: FYLRFFASLTSDSLANWGHDHSS*QPRPLG
Trigger: CCCCAGAGGTCGAGGCTGCAATGAGCTATGATCATG...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp TATTCTGCCATGAATGAAGTTTCCCGAGGCCTCCCCAGAAGCAGAAGCTGCTATTGCTTTAACTCTTACTaGGAGAGGTTCTTGCTTAAG +
Preference number: 5 (lower is better)
Translates to: YSAMNEVSRGLPRSRSCYCFNSY*ERFLLK
Trigger: CTTAAGCAAGAACCTCTCCAAGTAAGAGTTAAAGCA...ATAGCAGCTTCTGCTTCTGGGGAGGCCTCGGGAAACTTCATTCATGGCAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp TTTCAGTGTAGGAGAGGAGGAAACTTTGTAGAGTGGACGGACAAACTTGTTTCCATCTCACACAGGCAGTaGGGTCCACATGTTAAGAAC +
Preference number: 5 (lower is better)
Translates to: FQCRRGGNFVEWTDKLVSISHRQ*GPHVKN
Trigger: GTTCTTAACATGTGGACCCAACTGCCTGTGTGAGAT...GGAAACAAGTTTGTCCGTCCACTCTACAAAGTTTCCTCCTCTCCTACACTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp AAGGGATTCTATTGGTTGAGGATGAAGCAATCCCATGACTCCATGGTACCAAGATACTTGGAGAGGTTCTaGCTTAAGTGGAGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: KGFYWLRMKQSHDSMVPRYLERF*LKWSFE
Trigger: CTCAAAGCTCCACTTAAGCAAGAACCTCTCCAAGTA...TCTTGGTACCATGGAGTCATGGGATTGCTTCATCCTCAACCAATAGAATCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp ATGCTGAGACCATGCCTAATAAGGTGCCCACACCCAAAGAACCTAGGCTGTCATAAATATAGCGCATATTaGAAAATCCGTACGGATGAG +
Preference number: 5 (lower is better)
Translates to: MLRPCLIRCPHPKNLGCHKYSAY*KIRTDE
Trigger: CTCATCCGTACGGATTTTCAAATATGCGCTATATTT...ATGACAGCCTAGGTTCTTTGGGTGTGGGCACCTTATTAGGCATGGTCTCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp GCATTCCTACGAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTGAGTTCAGTGAGCCGTaGTACTTGTTCTGGCTGGAT +
Preference number: 5 (lower is better)
Translates to: AFLRSSFTATRSVAPSDTEFSEP*YLFWLD
Trigger: ATCCAGCCAGAACAAGTACAACGGCTCACTGAACTC...AGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTCGTAGGAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp TTTCAGTGTAGGAGAGGAGGAAACTTTGTAGAGTGGACGGACAAACTTGTTTCCGCCACCTTATATAGTTaGGGGACTGCTACTTACAGT +
Preference number: 5 (lower is better)
Translates to: FQCRRGGNFVEWTDKLVSATLYS*GTATYS
Trigger: ACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGGC...GGAAACAAGTTTGTCCGTCCACTCTACAAAGTTTCCTCCTCTCCTACACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp CCCACACCCAAAGAACCTAGGCTGTCATACAGTGGATTGCCTGTTATAGAAGTATCTAGATCACTGGATTaGAGGCAGAACTCATTTATC +
Preference number: 5 (lower is better)
Translates to: PTPKEPRLSYSGLPVIEVSRSLD*RQNSFI
Trigger: GATAAATGAGTTCTGCCTCAAATCCAGTGATCTAGA...TACTTCTATAACAGGCAATCCACTGTATGACAGCCTAGGTTCTTTGGGTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp AAGGGATTCTATTGGTTGAGGATGAAGCAATCCCATGACTCCATGGTACCAAGACAGCAACAAGAAGTGTaGCTCCTTCAGATACTAATG +
Preference number: 5 (lower is better)
Translates to: KGFYWLRMKQSHDSMVPRQQQEV*LLQILM
Trigger: CATTAGTATCTGAAGGAGCAACACTTCTTGTTGCTG...TCTTGGTACCATGGAGTCATGGGATTGCTTCATCCTCAACCAATAGAATCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTAGTGAGCCGTTGTACTaGTTCTGGCTGGATGGACCG +
Preference number: 5 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTSEPLY*FWLDGP
Trigger: CGGTCCATCCAGCCAGAACAAGTACAACGGCTCACT...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp CTTAGCACTCAGGTCAAAATCACAAGGTATGGAGAAATAATTTCCACATTCTATATCAATCATGGACCCTaGACTGCCCCTCCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: LSTQVKITRYGEIISTFYINHGP*TAPPLS
Trigger: GGACAGAGGAGGGGCAGTCAAGGGTCCATGATTGAT...ATAGAATGTGGAAATTATTTCTCCATACCTTGTGATTTTGACCTGAGTGCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp GCATTCCTACGAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTGCCATTATTCCTTTCTaGGGCTCTTACTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: AFLRSSFTATRSVAPSDTAIIPF*GSYLER
Trigger: CCTCTCCAAGTAAGAGCCCAAGAAAGGAATAATGGC...AGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTCGTAGGAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp AAGGGATTCTATTGGTTGAGGATGAAGCAATCCCATGACTCCATGGTACCAAGAGGAGTACAACTTTACTaGACTCAGGGTACCAATATA +
Preference number: 5 (lower is better)
Translates to: KGFYWLRMKQSHDSMVPRGVQLY*TQGTNI
Trigger: TATATTGGTACCCTGAGTCAAGTAAAGTTGTACTCC...TCTTGGTACCATGGAGTCATGGGATTGCTTCATCCTCAACCAATAGAATCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTTACTTGGAGAGGTTCTaGCTTAAGTGGAGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: FYLRFFASLTSDSLANWGYLERF*LKWSFE
Trigger: CTCAAAGCTCCACTTAAGCAAGAACCTCTCCAAGTA...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTAGAAGGATCTGGTGTTaGAACAGACTTACTGATGCC +
Preference number: 5 (lower is better)
Translates to: FYLRFFASLTSDSLANWGRRIWC*NRLTDA
Trigger: GGCATCAGTAAGTCTGTTCAAACACCAGATCCTTCT...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS TCA 90 bp TGCCTATACCTTCTGCTGTTTCAAATGATGGTACTTTTTCCACTCTaGGTGTTTGTGATCCCTGTCCTTCTTTCTGAACATTTGTGGAGT +
Preference number: 5 (lower is better)
Translates to: CLYLLLFQMMVLFPL*VFVIPVLLSEHLWS
Trigger: ACTCCACAAATGTTCAGAAAGAAGGACAGGGATCACAAACACTCAGAGTGGAAAAAGTACCATCATTTGAAACAGCAGAAGGTATAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264451.12
ENST00000510460.1
ENST00000513699.5
CDS-3UTR CAA 90 bp GCATTCCTACGAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAAGGGATTCTATTGGTaGAGGATGAAGCAATCCCAT +
Preference number: 5 (lower is better)
Translates to: AFLRSSFTATRSVAPSDTKGFYW*RMKQSH
Trigger: ATGGGATTGCTTCATCCTCAACCAATAGAATCCCTT...AGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTCGTAGGAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp AACTGTGCCACCTTATATAGTTTGGGGACTGCTACTTACAGTGAATTAGAGATCCAGCAACAAGAAGTGTaGCTCCTTCAGATACTAATG +
Preference number: 5 (lower is better)
Translates to: NCATLYSLGTATYSELEIQQQEV*LLQILM
Trigger: CATTAGTATCTGAAGGAGCAACACTTCTTGTTGCTG...GATCTCTAATTCACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGGCACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp CTTAGCACTCAGGTCAAAATCACAAGGTATGGAGAAATAATTTCCACATTCTATCTTACCTCTTTGGAGTaGGATACTATAGGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: LSTQVKITRYGEIISTFYLTSLE*DTIGPQ
Trigger: CTGGGGGCCTATAGTATCCAACTCCAAAGAGGTAAG...ATAGAATGTGGAAATTATTTCTCCATACCTTGTGATTTTGACCTGAGTGCTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp GAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAATGATCCTGTTCTTGGGCTCTTACTaGGAGAGGTTCTTGCTTAAG +
Preference number: 5 (lower is better)
Translates to: EVHLQQQEVLLLQILMILFLGSY*ERFLLK
Trigger: CTTAAGCAAGAACCTCTCCAAGTAAGAGCCCAAGAA...CAGGATCATTAGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp AACTGTGCCACCTTATATAGTTTGGGGACTGCTACTTACAGTGAATTAGAGATCTACAGGGAACCATGTTaGAAAAGCTTCCAAATGTCA +
Preference number: 5 (lower is better)
Translates to: NCATLYSLGTATYSELEIYREPC*KSFQMS
Trigger: TGACATTTGGAAGCTTTTCAAACATGGTTCCCTGTA...GATCTCTAATTCACTGTAAGTAGCAGTCCCCAAACTATATAAGGTGGCACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTTCTAGATCACTGGATTaGAGGCAGAACTCATTTATC +
Preference number: 5 (lower is better)
Translates to: FYLRFFASLTSDSLANWGSRSLD*RQNSFI
Trigger: GATAAATGAGTTCTGCCTCAAATCCAGTGATCTAGA...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTGTTCTGGAGCGTGGCTaGGTATTTCCCAAGAAATCT +
Preference number: 5 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTVLERG*VFPKKS
Trigger: AGATTTCTTGGGAAATACCAAGCCACGCTCCAGAAC...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp TTTTACCTTCGATTCTTTGCTTCACTGACTTCTGACAGTTTGGCAAATTGGGGTAAGGAAAGACAGACTTaGAAACGGAGTGACTGTTTA +
Preference number: 5 (lower is better)
Translates to: FYLRFFASLTSDSLANWGKERQT*KRSDCL
Trigger: TAAACAGTCACTCCGTTTCAAAGTCTGTCTTTCCTT...ACCCCAATTTGCCAAACTGTCAGAAGTCAGTGAAGCAAAGAATCGAAGGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp GCATTCCTACGAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAAAAGTGTGGGCCTCTaGTTCTTTAATTGCCTTACT +
Preference number: 5 (lower is better)
Translates to: AFLRSSFTATRSVAPSDTKSVGL*FFNCLT
Trigger: AGTAAGGCAATTAAAGAACAAGAGGCCCACACTTTT...AGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTCGTAGGAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp GCATTCCTACGAAGTTCATTTACAGCAACAAGAAGTGTTGCTCCTTCAGATACTAAGCAGTTTAATCCATaGATGCAAATTGCAACCATC +
Preference number: 5 (lower is better)
Translates to: AFLRSSFTATRSVAPSDTKQFNP*MQIATI
Trigger: GATGGTTGCAATTTGCATCAATGGATTAAACTGCTT...AGTATCTGAAGGAGCAACACTTCTTGTTGCTGTAAATGAACTTCGTAGGAATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS-3UTR CAA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTTGCTGCACATTAACTTaGAGGGTCGTCTTGGGAAAA +
Preference number: 5 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTCCTLT*RVVLGK
Trigger: TTTTCCCAAGACGACCCTCAAAGTTAATGTGCAGCA...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS TCA 90 bp ATTTATCGCTCTGACTCCAGTGATGAAATTATTCTGAGTGTACTTTaGGCCATACTCCCTTTTCTTAAGGACTGCTTTAACTCTTACTTG +
Preference number: 5 (lower is better)
Translates to: IYRSDSSDEIILSVL*AILPFLKDCFNSYL
Trigger: CAAGTAAGAGTTAAAGCAGTCCTTAAGAAAAGGGAGTATGGCTCAAAGTACACTCAGAATAATTTCATCACTGGAGTCAGAGCGATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264451.12
ENST00000510460.1
CDS-3UTR CAA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTAAGGGATTCTATTGGTaGAGGATGAAGCAATCCCAT +
Preference number: 5 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTKGFYW*RMKQSH
Trigger: ATGGGATTGCTTCATCCTCAACCAATAGAATCCCTT...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTCTGTCATACAGTGGATaGCCTGTTATAGAAGTAAGG +
Preference number: 5 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTLSYSG*PVIEVR
Trigger: CCTTACTTCTATAACAGGCAATCCACTGTATGACAG...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp CTTAGCACTCAGGTCAAAATCACAAGGTATGGAGAAATAATTTCCACATTCTATGGAGTACAACTTTACTaGACTCAGGGTACCAATATA +
Preference number: 5 (lower is better)
Translates to: LSTQVKITRYGEIISTFYGVQLY*TQGTNI
Trigger: TATATTGGTACCCTGAGTCAAGTAAAGTTGTACTCC...ATAGAATGTGGAAATTATTTCTCCATACCTTGTGATTTTGACCTGAGTGCTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS-3UTR CAA 90 bp AAATTTTTCCGTCTGATCTTATCTCACAGGTTCTTTAGTGTATGTTCAGGAACTAAGCAGTTTAATCCATaGATGCAAATTGCAACCATC +
Preference number: 5 (lower is better)
Translates to: KFFRLILSHRFFSVCSGTKQFNP*MQIATI
Trigger: GATGGTTGCAATTTGCATCAATGGATTAAACTGCTT...AGTTCCTGAACATACACTAAAGAACCTGTGAGATAAGATCAGACGGAAAAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264451.12
CDS CCA 72 bp GGGCCGCGGCGGCGGCCAAGCCGGGTAACATCCTGGTaGGGCAGAGGCCCCTACTCGGACACCGCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: GPRRRPSRVTSW*GRGPYSDTAFC
Trigger: GCAGAAGGCGGTGTCCGAGTAGGGGCCTCTGCCCCACCAGGATGTTACCCGGCTTGGCCGCCGCCGCGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264451.12
ENST00000510460.1
ENST00000513699.5
CDS CCA 72 bp TGTGGGCCGCGGCGGCGGCCAAGCCGGGTAACATCCTaGTGGGGCAGAGGCCCCTACTCGGACACCGCCTTC +
Preference number: 6 (lower is better)
Translates to: CGPRRRPSRVTS*WGRGPYSDTAF
Trigger: GAAGGCGGTGTCCGAGTAGGGGCCTCTGCCCCACCAGGATGTTACCCGGCTTGGCCGCCGCCGCGGCCCACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264451.12
ENST00000510460.1
ENST00000513699.5
CDS GCA 72 bp ACTCCTGGCGGTCGCTGGGATTACAGGCCGCCGCCCTaGATCGCAGACGGAGCCGGCACAGGGAGGACCAGC +
Preference number: 6 (lower is better)
Translates to: TPGGRWDYRPPP*IADGAGTGRTS
Trigger: GCTGGTCCTCCCTGTGCCGGCTCCGTCTGCGATGCAGGGCGGCGGCCTGTAATCCCAGCGACCGCCAGGAGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264451.12
ENST00000510460.1
ENST00000513699.5
CDS CCA 72 bp AGACGGAGCCGGCACAGGGAGGACCAGCTACATCTGTaGGCCGCGGCGGCGGCCAAGCCGGGTAACATCCTG +
Preference number: 6 (lower is better)
Translates to: RRSRHREDQLHL*AAAAAKPGNIL
Trigger: CAGGATGTTACCCGGCTTGGCCGCCGCCGCGGCCCACAGATGTAGCTGGTCCTCCCTGTGCCGGCTCCGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264451.12
ENST00000510460.1
ENST00000513699.5
CDS TCA 72 bp ACCGCCTTCTGCCTCCGCGCCGCCACCGGTACCAACTaGCTCCATAGACTGGACATCAGCGAACACCGATGG +
Preference number: 6 (lower is better)
Translates to: TAFCLRAATGTN*LHRLDISEHRW
Trigger: CCATCGGTGTTCGCTGATGTCCAGTCTATGGAGTCAGTTGGTACCGGTGGCGGCGCGGAGGCAGAAGGCGGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264451.12
ENST00000510460.1
ENST00000513699.5
CDS CCA 72 bp TCCGCGCCGCCACCGGTACCAACTGACTCCATAGACTaGACATCAGCGAACACCGATGGCTTCGCCGCCACA +
Preference number: 6 (lower is better)
Translates to: SAPPPVPTDSID*TSANTDGFAAT
Trigger: TGTGGCGGCGAAGCCATCGGTGTTCGCTGATGTCCAGTCTATGGAGTCAGTTGGTACCGGTGGCGGCGCGGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264451.12
ENST00000510460.1
ENST00000513699.5
CDS CCA 72 bp TTCTTGGGCTCTTACTTGGAGAGGTTCTTGCTTAAGTaGAGCTTTGAGTTCTGTGCCTATACCTTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: FLGSYLERFLLK*SFEFCAYTFCC
Trigger: ACAGCAGAAGGTATAGGCACAGAACTCAAAGCTCCACTTAAGCAAGAACCTCTCCAAGTAAGAGCCCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS CAA 90 bp CTTGACTCAGGGTACCAATATATGGATGACTACAGGGAACCATGTTaGAAAAGCTTCCAAATGTCACTAAATTCTGCCACTCCTGGCGGT +
Preference number: 6 (lower is better)
Translates to: LDSGYQYMDDYREPC*KSFQMSLNSATPGG
Trigger: ACCGCCAGGAGTGGCAGAATTTAGTGACATTTGGAAGCTTTTCAAACATGGTTCCCTGTAGTCATCCATATATTGGTACCCTGAGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264451.12
ENST00000510460.1
ENST00000513699.5
CDS CAA 90 bp CTTTCTTGGGCTCTTACTTGGAGAGGTTCTTGCTTAAGTGGAGCTTaGAGTTCTGTGCCTATACCTTCTGCTGTTTCAAATGATGGTACT +
Preference number: 6 (lower is better)
Translates to: LSWALTWRGSCLSGA*SSVPIPSAVSNDGT
Trigger: AGTACCATCATTTGAAACAGCAGAAGGTATAGGCACAGAACTCAAAGCTCCACTTAAGCAAGAACCTCTCCAAGTAAGAGCCCAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS GCA 72 bp TTATTCCTTTCTTGGGCTCTTACTTGGAGAGGTTCTTaGTTAAGTGGAGCTTTGAGTTCTGTGCCTATACCT +
Preference number: 6 (lower is better)
Translates to: LFLSWALTWRGS*LSGALSSVPIP
Trigger: AGGTATAGGCACAGAACTCAAAGCTCCACTTAAGCAAGAACCTCTCCAAGTAAGAGCCCAAGAAAGGAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS CCA 72 bp TGCTTTAACTCTTACTTGGAGAGGTTCTTGCTTAAGTaGAGCTTTGAGTTCTGTGCCTATACCTTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: CFNSYLERFLLK*SFEFCAYTFCC
Trigger: ACAGCAGAAGGTATAGGCACAGAACTCAAAGCTCCACTTAAGCAAGAACCTCTCCAAGTAAGAGTTAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264451.12
ENST00000510460.1
CDS CAA 72 bp CTTAAGGACTGCTTTAACTCTTACTTGGAGAGGTTCTaGCTTAAGTGGAGCTTTGAGTTCTGTGCCTATACC +
Preference number: 6 (lower is better)
Translates to: LKDCFNSYLERF*LKWSFEFCAYT
Trigger: GGTATAGGCACAGAACTCAAAGCTCCACTTAAGCAAGAACCTCTCCAAGTAAGAGTTAAAGCAGTCCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264451.12
ENST00000510460.1
CDS CAA 72 bp GCTCTTACTTGGAGAGGTTCTTGCTTAAGTGGAGCTTaGAGTTCTGTGCCTATACCTTCTGCTGTTTCAAAT +
Preference number: 6 (lower is better)
Translates to: ALTWRGSCLSGA*SSVPIPSAVSN
Trigger: ATTTGAAACAGCAGAAGGTATAGGCACAGAACTCAAAGCTCCACTTAAGCAAGAACCTCTCCAAGTAAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS CAA 72 bp ATTATTCCTTTCTTGGGCTCTTACTTGGAGAGGTTCTaGCTTAAGTGGAGCTTTGAGTTCTGTGCCTATACC +
Preference number: 6 (lower is better)
Translates to: IIPFLGSYLERF*LKWSFEFCAYT
Trigger: GGTATAGGCACAGAACTCAAAGCTCCACTTAAGCAAGAACCTCTCCAAGTAAGAGCCCAAGAAAGGAATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513699.5
CDS CAA 72 bp ACTCTTACTTGGAGAGGTTCTTGCTTAAGTGGAGCTTaGAGTTCTGTGCCTATACCTTCTGCTGTTTCAAAT +
Preference number: 6 (lower is better)
Translates to: TLTWRGSCLSGA*SSVPIPSAVSN
Trigger: ATTTGAAACAGCAGAAGGTATAGGCACAGAACTCAAAGCTCCACTTAAGCAAGAACCTCTCCAAGTAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264451.12
ENST00000510460.1
CDS CAA 90 bp ACTGCTTTAACTCTTACTTGGAGAGGTTCTTGCTTAAGTGGAGCTTaGAGTTCTGTGCCTATACCTTCTGCTGTTTCAAATGATGGTACT +
Preference number: 6 (lower is better)
Translates to: TALTLTWRGSCLSGA*SSVPIPSAVSNDGT
Trigger: AGTACCATCATTTGAAACAGCAGAAGGTATAGGCACAGAACTCAAAGCTCCACTTAAGCAAGAACCTCTCCAAGTAAGAGTTAAAGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264451.12
ENST00000510460.1