RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC30A7 (Homo sapiens)

Ensembl gene IDs: ENSG00000162695

Ensembl transcript IDs: ENST00000357650.9, ENST00000370111.4, ENST00000370112.8

Found 287 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAAGCAGTGATTTCCAGCAGCTGCAGTGAAGACATTCCAGAAGACTaGAGGCCCACAACTGAAATTCTTACTGGCTGGGATGAGAGGATG +
Preference number: 1 (lower is better)
Translates to: KAVISSSCSEDIPED*RPTTEILTGWDERM
Trigger: CATCCTCTCATCCCAGCCAGTAAGAATTTCAGTTGTGGGCCTCCAGTCTTCTGGAATGTCTTCACTGCAGCTGCTGGAAATCACTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357650.9
3UTR TCA 90 bp AAATCTGATCCCTTAGCTGTGAACTCCCCACAAAGCATGAACGGCTaGCTCTACCCCGTCTACTTAGTGCTCGGGAGTTGTAGTGATAAT +
Preference number: 1 (lower is better)
Translates to: KSDPLAVNSPQSMNG*LYPVYLVLGSCSDN
Trigger: ATTATCACTACAACTCCCGAGCACTAAGTAGACGGGGTAGAGTCAGCCGTTCATGCTTTGTGGGGAGTTCACAGCTAAGGGATCAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357650.9
3UTR CCA 90 bp AAAGCAGTGATTTCCAGCAGCTGCAGTGAAGACATTCCAGAAGACTaGAGGCCCACAACTGAAATTCTTACTGGCAGAAAAATTTGGTCC +
Preference number: 1 (lower is better)
Translates to: KAVISSSCSEDIPED*RPTTEILTGRKIWS
Trigger: GGACCAAATTTTTCTGCCAGTAAGAATTTCAGTTGTGGGCCTCCAGTCTTCTGGAATGTCTTCACTGCAGCTGCTGGAAATCACTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370112.8
3UTR GCA 90 bp AGTAATACTGGTTTTGTGGGAATGAAAGCAGTGATTTCCAGCAGCTaGAGTGAAGACATTCCAGAAGACTGGAGGCCCACAACTGAAATT +
Preference number: 1 (lower is better)
Translates to: SNTGFVGMKAVISSS*SEDIPEDWRPTTEI
Trigger: AATTTCAGTTGTGGGCCTCCAGTCTTCTGGAATGTCTTCACTGCAGCTGCTGGAAATCACTGCTTTCATTCCCACAAAACCAGTATTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR GCA 90 bp ACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCAATCTaGAGCAGTTTAGAAAAGAATGAAGAAAGTGGTCTAGTTCTCCTA +
Preference number: 1 (lower is better)
Translates to: TLPAEKRLLIEFTAI*SSLEKNEESGLVLL
Trigger: TAGGAGAACTAGACCACTTTCTTCATTCTTTTCTAAACTGCTGCAGATTGCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR TCA 90 bp TATATTTCTGTTTGGGAAGGTTTACCAGGCAAGGTAAACTGTCCCTaGGCAATACAAATTTGTTGTCCAGAGAATATTTTGGCTTTTAAA +
Preference number: 1 (lower is better)
Translates to: YISVWEGLPGKVNCP*AIQICCPENILAFK
Trigger: TTTAAAAGCCAAAATATTCTCTGGACAACAAATTTGTATTGCTCAGGGACAGTTTACCTTGCCTGGTAAACCTTCCCAAACAGAAATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAACTGGAGGCCCACAACTaGAATTCTTACTGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: AWWHTPIVAATQKAEAGELEAHN*NSYWLG
Trigger: TCCCAGCCAGTAAGAATTTCAGTTGTGGGCCTCCAG...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357650.9
3UTR-3UTR TCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAACAAAGCATGAACGGCTaGCTCTACCCCGTCTACTTA +
Preference number: 2 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEQSMNG*LYPVYL
Trigger: TAAGTAGACGGGGTAGAGTCAGCCGTTCATGCTTTG...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357650.9
3UTR-3UTR TCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAAAACATACATGACTCTTaGTGGTACATTTCTATGCTG +
Preference number: 2 (lower is better)
Translates to: AWWHTPIVAATQKAEAGENIHDS*WYISML
Trigger: CAGCATAGAAATGTACCATCAAGAGTCATGTATGTT...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACAGCACTTTGGGAGGCTaGGGTGGACGGATCACGAGG +
Preference number: 2 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHSTLGG*GGRITR
Trigger: CCTCGTGATCCGTCCACCTCAGCCTCCCAAAGTGCT...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAAAGCAGAGGTTGCAGTaGGCTGAGATTATGCCACTG +
Preference number: 2 (lower is better)
Translates to: KPPGSKQTCLENATLPAEKQRLQ*AEIMPL
Trigger: CAGTGGCATAATCTCAGCTCACTGCAACCTCTGCTT...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACAGCACTTTGGGAGGCTaGGGTGGACGGATCACGAGG +
Preference number: 2 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDSTLGG*GGRITR
Trigger: CCTCGTGATCCGTCCACCTCAGCCTCCCAAAGTGCT...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR GCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCCCGGGAAGCAGAGGTTaGAGTGAGCTGAGATTATGC +
Preference number: 2 (lower is better)
Translates to: FRKCHFACGKETIDRVHGPGSRG*SELRLC
Trigger: GCATAATCTCAGCTCACTGCAACCTCTGCTTCCCGG...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCTTCCAGCAGCTGCAGTaGAGACATTCCAGAAGACTG +
Preference number: 2 (lower is better)
Translates to: FRKCHFACGKETIDRVHGFQQLQ*RHSRRL
Trigger: CAGTCTTCTGGAATGTCTTCACTGCAGCTGCTGGAA...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACGGCAGGAGAATAGCTTaGACCCGGGAAGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHGRRIA*TREAEV
Trigger: AACCTCTGCTTCCCGGGTTCAAGCTATTCTCCTGCC...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACAGGTGGAGGTTGCAGTaGGCTGAGACTGCGCCACTA +
Preference number: 2 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDRWRLQ*AETAPL
Trigger: TAGTGGCGCAGTCTCAGCTCACTGCAACCTCCACCT...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp TATCCTTCCCCTGAGGGCTTACAGCTTTCCACAAAAGCTCAGTCTAACAGAAAAATCCATCTGGCCCGATaGGGACAGCTTCAAGTTTTA +
Preference number: 2 (lower is better)
Translates to: YPSPEGLQLSTKAQSNRKIHLAR*GQLQVL
Trigger: TAAAACTTGAAGCTGTCCTCATCGGGCCAGATGGAT...TTTTCTGTTAGACTGAGCTTTTGTGGAAAGCTGTAAGCCCTCAGGGGAAGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370111.4
3UTR-3UTR GCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACCCGGGCGTGGTGGCGTaGACCTGTAATTCCAGTTAC +
Preference number: 2 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDPGVVA*TCNSSY
Trigger: GTAACTGGAATTACAGGTGCACGCCACCACGCCCGG...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CCA 90 bp TATCCTTCCCCTGAGGGCTTACAGCTTTCCACAAAAGCTCAGTCTAACAGAAAATTTGCTTTATCCATCTaGCCCGATGAGGACAGCTTC +
Preference number: 2 (lower is better)
Translates to: YPSPEGLQLSTKAQSNRKFALSI*PDEDSF
Trigger: GAAGCTGTCCTCATCGGGCCAGATGGATAAAGCAAA...TTTTCTGTTAGACTGAGCTTTTGTGGAAAGCTGTAAGCCCTCAGGGGAAGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370111.4
3UTR-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAACTCCCCACAAAGCATaGACGGCTGACTCTACCCCG +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTTPHKA*TADSTP
Trigger: CGGGGTAGAGTCAGCCGTTCATGCTTTGTGGGGAGT...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357650.9
3UTR-3UTR TCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACGGCAGGAGAATAGCTTaGACCCGGGAAGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDGRRIA*TREAEV
Trigger: AACCTCTGCTTCCCGGGTTCAAGCTATTCTCCTGCC...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAAGGTGGAGGTTGCAGTaGGCTGAGACTGCGCCACTA +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTRWRLQ*AETAPL
Trigger: TAGTGGCGCAGTCTCAGCTCACTGCAACCTCCACCT...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR GCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAGTGATTTCCAGCAGCTaGAGTGAAGACATTCCAGAA +
Preference number: 2 (lower is better)
Translates to: KPPGSKQTCLENATLPAEVISSS*SEDIPE
Trigger: TTCTGGAATGTCTTCACTGCAGCTGCTGGAAATCAC...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR GCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCCTGAGATTATGCCACTaGACTCCAGCCTGGCTACAG +
Preference number: 2 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFLRLCH*TPAWLQ
Trigger: CTGTAGCCAGGCTGGAGTGCAGTGGCATAATCTCAG...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCGAAATTCTTACTGGCTaGGATGAGAGGATGGTGGTG +
Preference number: 2 (lower is better)
Translates to: FRKCHFACGKETIDRVHGEILTG*DERMVV
Trigger: CACCACCATCCTCTCATCCCAGCCAGTAAGAATTTC...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357650.9
3UTR CAA 90 bp TTCAAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTaGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCAATCTGC +
Preference number: 2 (lower is better)
Translates to: FKPPGSKQTCLENAT*PAEKRLLIEFTAIC
Trigger: GCAGATTGCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCAAGCAGAGGTTGCAGTaGGCTGAGATTATGCCACTG +
Preference number: 2 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFKQRLQ*AEIMPL
Trigger: CAGTGGCATAATCTCAGCTCACTGCAACCTCTGCTT...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACACCCTGGCCAACGTGGTaGAACCCTGTCTCTGCTAAA +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTPWPTW*NPVSAK
Trigger: TTTAGCAGAGACAGGGTTTCACCACGTTGGCCAGGG...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR GCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACCTGAGATTATGCCACTaGACTCCAGCCTGGCTACAG +
Preference number: 2 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDLRLCH*TPAWLQ
Trigger: CTGTAGCCAGGCTGGAGTGCAGTGGCATAATCTCAG...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACCTGGAGGCCCACAACTaGAATTCTTACTGGCAGAAA +
Preference number: 2 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHLEAHN*NSYWQK
Trigger: TTTCTGCCAGTAAGAATTTCAGTTGTGGGCCTCCAG...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370112.8
3UTR-3UTR CCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAGCTGGGATGAGAGGATaGTGGTGTGGGCATTCAACA +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTAGMRG*WCGHST
Trigger: TGTTGAATGCCCACACCACCATCCTCTCATCCCAGC...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357650.9
3UTR-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACATTCCAGCAGCTGCAGTaGAGACATTCCAGAAGACTG +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTFQQLQ*RHSRRL
Trigger: CAGTCTTCTGGAATGTCTTCACTGCAGCTGCTGGAA...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAAACATACATGACTCTTaGTGGTACATTTCTATGCTG +
Preference number: 2 (lower is better)
Translates to: KPPGSKQTCLENATLPAENIHDS*WYISML
Trigger: CAGCATAGAAATGTACCATCAAGAGTCATGTATGTT...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACACAAAAGCTTTTCCAGTaGCTGGAAGCCAACACGACA +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTQKLFQ*LEANTT
Trigger: TGTCGTGTTGGCTTCCAGTCACTGGAAAAGCTTTTG...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR GCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACGTGATTTCCAGCAGCTaGAGTGAAGACATTCCAGAA +
Preference number: 2 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDVISSS*SEDIPE
Trigger: TTCTGGAATGTCTTCACTGCAGCTGCTGGAAATCAC...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACGAGTTCTCTCAGACTTaGTGGTGGTTGCAAACTTCT +
Preference number: 2 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDEFSQT*WWLQTS
Trigger: AGAAGTTTGCAACCACCACCAAGTCTGAGAGAACTC...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACGCTATCTTGAGTCTCTaGTTGAGATCTGGGTCACTA +
Preference number: 2 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDAILSL*LRSGSL
Trigger: TAGTGACCCAGATCTCAACCAGAGACTCAAGATAGC...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCGATACAAAGGCACTTTaGAAACCCAATATGGTTTGG +
Preference number: 2 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFDTKAL*KPNMVW
Trigger: CCAAACCATATTGGGTTTTCAAAGTGCCTTTGTATC...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCTTGGCATTTGAAGAATaGAAAAGCCAAACAGCACTG +
Preference number: 2 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFLAFEE*KSQTAL
Trigger: CAGTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAA...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAGTGACTTTGAGCAAATaGGAGTTTTTCTGGGCTTCG +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTVTLSK*EFFWAS
Trigger: CGAAGCCCAGAAAAACTCTCATTTGCTCAAAGTCAC...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACCCAACACGACAAGAATaGAATGGTATGACCTGTGAA +
Preference number: 2 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDPTRQE*NGMTCE
Trigger: TTCACAGGTCATACCATTTCATTCTTGTCGTGTTGG...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCAAACCCAATATGGTTTaGTTCATAAGTTTGCAAGGT +
Preference number: 2 (lower is better)
Translates to: FRKCHFACGKETIDRVHGKPNMV*FISLQG
Trigger: ACCTTGCAAACTTATGAACCAAACCATATTGGGTTT...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACGGTTTTCAGGAATGCTaGCAAATTCCAGATATAAGG +
Preference number: 2 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDGFQEC*QIPDIR
Trigger: CCTTATATCTGGAATTTGTCAGCATTCCTGAAAACC...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACAGCTTCTTGGATCTTTaGAGCACTGCTGAATTACAT +
Preference number: 2 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDSFLDL*STAELH
Trigger: ATGTAATTCAGCAGTGCTTCAAAGATCCAAGAAGCT...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR GCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACGAGTGTATTGAGATCTaGTACAGCTTCTTGGATCTT +
Preference number: 2 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDECIEI*YSFLDL
Trigger: AAGATCCAAGAAGCTGTAGCAGATCTCAATACACTC...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACCTGGGTACAATGTTTTaGATCGTACAGTACCAGAAA +
Preference number: 2 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDLGTMF*IVQYQK
Trigger: TTTCTGGTACTGTACGATCCAAAACATTGTACCCAG...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357650.9
3UTR-3UTR CCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACATCTCAGACTTGGTGGTaGTTGCAAACTTCTAATGAC +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTSQTWW*LQTSND
Trigger: GTCATTAGAAGTTTGCAACCACCACCAAGTCTGAGA...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACTTTGAGTTCATGATTTaGCTGCTGTACAAAGGTGCA +
Preference number: 2 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDFEFMI*LLYKGA
Trigger: TGCACCTTTGTACAGCAGCCAAATCATGAACTCAAA...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAGATACAAAGGCACTTTaGAAACCCAATATGGTTTGG +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTDTKAL*KPNMVW
Trigger: CCAAACCATATTGGGTTTTCAAAGTGCCTTTGTATC...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACATTGGCATTTGAAGAATaGAAAAGCCAAACAGCACTG +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTLAFEE*KSQTAL
Trigger: CAGTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAA...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAATCTTTCACTGTATTTaGGGCTATCTTGAGTCTCTG +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTIFHCI*GYLESL
Trigger: CAGAGACTCAAGATAGCCTCAAATACAGTGAAAGAT...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAAGCTTCTTGGATCTTTaGAGCACTGCTGAATTACAT +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTSFLDL*STAELH
Trigger: ATGTAATTCAGCAGTGCTTCAAAGATCCAAGAAGCT...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACATATAGGAGAGTGTATTaGGATCTGCTACAGCTTCTT +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTYRRVY*DLLQLL
Trigger: AAGAAGCTGTAGCAGATCTCAATACACTCTCCTATA...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACACATTTACTCAGCATGTaGATCCATGCTAAGTTTGAG +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTHLLSM*IHAKFE
Trigger: CTCAAACTTAGCATGGATTCACATGCTGAGTAAATG...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAGTATATGAAAAAGAATaGGCAGCTCATAGGGCTACT +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTVYEKE*AAHRAT
Trigger: AGTAGCCCTATGAGCTGCTCATTCTTTTTCATATAC...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR GCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAGAGTTCACGGCAATCTaGAGCAGTTTAGAAAAGAAT +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTEFTAI*SSLEKN
Trigger: ATTCTTTTCTAAACTGCTGCAGATTGCCGTGAACTC...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAAGGCAAATATTACACTaGAGAGGCAGCATAATAGAG +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTRQILH*RGSIIE
Trigger: CTCTATTATGCTGCCTCTCCAGTGTAATATTTGCCT...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACATACATTTTGAGTTCATaGTTTGGCTGCTGTACAAAG +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTYILSS*FGCCTK
Trigger: CTTTGTACAGCAGCCAAATCATGAACTCAAAATGTA...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACACAACAAGCCTTCCAATaGATGTCCAAAGAAAAACAT +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTQQAFQ*MSKEKH
Trigger: ATGTTTTTCTTTGGACATTCATTGGAAGGCTTGTTG...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR GCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAATCAACAGGGATTTCTaGCACATCACTAAAAAGTAC +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTINRDF*HITKKY
Trigger: GTACTTTTTAGTGATGTGGCAGAAATCCCTGTTGAT...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAAAACCCAATATGGTTTaGTTCATAAGTTTGCAAGGT +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTKPNMV*FISLQG
Trigger: ACCTTGCAAACTTATGAACCAAACCATATTGGGTTT...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACATATCCAAACCTATGCTaGAAGTACACAAAAAGACAA +
Preference number: 2 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTYPNLC*KYTKRQ
Trigger: TTGTCTTTTTGTGTACTTCCAGCATAGGTTTGGATA...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR TCA 72 bp CCCTTAGCTGTGAACTCCCCACAAAGCATGAACGGCTaGCTCTACCCCGTCTACTTAGTGCTCGGGAGTTGT +
Preference number: 3 (lower is better)
Translates to: PLAVNSPQSMNG*LYPVYLVLGSC
Trigger: ACAACTCCCGAGCACTAAGTAGACGGGGTAGAGTCAGCCGTTCATGCTTTGTGGGGAGTTCACAGCTAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357650.9
3UTR-3UTR CAA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAAGCTGGGTACAATGTTTaGGATCGTACAGTACCAGAA +
Preference number: 3 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEAGYNV*DRTVPE
Trigger: TTCTGGTACTGTACGATCCAAAACATTGTACCCAGC...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357650.9
3UTR CCA 72 bp GAAGACTGGAGGCCCACAACTGAAATTCTTACTGGCTaGGATGAGAGGATGGTGGTGTGGGCATTCAACATG +
Preference number: 3 (lower is better)
Translates to: EDWRPTTEILTG*DERMVVWAFNM
Trigger: CATGTTGAATGCCCACACCACCATCCTCTCATCCCAGCCAGTAAGAATTTCAGTTGTGGGCCTCCAGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357650.9
3UTR CCA 72 bp ATTTCCAGCAGCTGCAGTGAAGACATTCCAGAAGACTaGAGGCCCACAACTGAAATTCTTACTGGCTGGGAT +
Preference number: 3 (lower is better)
Translates to: ISSSCSEDIPED*RPTTEILTGWD
Trigger: ATCCCAGCCAGTAAGAATTTCAGTTGTGGGCCTCCAGTCTTCTGGAATGTCTTCACTGCAGCTGCTGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357650.9
3UTR-3UTR CAA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCAGGCAGGAGAATAGCTaGAACCCGGGAAGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFRQENS*NPGSRG
Trigger: ACCTCTGCTTCCCGGGTTCAAGCTATTCTCCTGCCT...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR TCA 72 bp CTGTCCTTCACAAAGATGCATGGGGAGTTAGCAAACTaGGGAAGCTGTGGATATGTTAAGCCCTTCATCTTG +
Preference number: 3 (lower is better)
Translates to: LSFTKMHGELAN*GSCGYVKPFIL
Trigger: CAAGATGAAGGGCTTAACATATCCACAGCTTCCTCAGTTTGCTAACTCCCCATGCATCTTTGTGAAGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CAA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACAGGCAGGAGAATAGCTaGAACCCGGGAAGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDRQENS*NPGSRG
Trigger: ACCTCTGCTTCCCGGGTTCAAGCTATTCTCCTGCCT...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR TCA 72 bp GAATTACATACACAAAGCAGAGCAGATGTCAGCACCTaGTTAATCAGTACTCTACTACTGGCTAGATTCCCC +
Preference number: 3 (lower is better)
Translates to: ELHTQSRADVST*LISTLLLARFP
Trigger: GGGGAATCTAGCCAGTAGTAGAGTACTGATTAATCAGGTGCTGACATCTGCTCTGCTTTGTGTATGTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR CCA 72 bp ACAGATAAACTAGATACTGTCCTTCACAAAGATGCATaGGGAGTTAGCAAACTGAGGAAGCTGTGGATATGT +
Preference number: 3 (lower is better)
Translates to: TDKLDTVLHKDA*GVSKLRKLWIC
Trigger: ACATATCCACAGCTTCCTCAGTTTGCTAACTCCCCATGCATCTTTGTGAAGGACAGTATCTAGTTTATCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CAA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAAAAACCCAATATGGTTaGGTTCATAAGTTTGCAAGG +
Preference number: 3 (lower is better)
Translates to: KPPGSKQTCLENATLPAEKTQYG*VHKFAR
Trigger: CCTTGCAAACTTATGAACCAAACCATATTGGGTTTT...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CAA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCGGATACAAAGGCACTTaGAAAACCCAATATGGTTTG +
Preference number: 3 (lower is better)
Translates to: FRKCHFACGKETIDRVHGGYKGT*KTQYGL
Trigger: CAAACCATATTGGGTTTTCAAAGTGCCTTTGTATCC...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CAA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCAAAACCCAATATGGTTaGGTTCATAAGTTTGCAAGG +
Preference number: 3 (lower is better)
Translates to: FRKCHFACGKETIDRVHGKTQYG*VHKFAR
Trigger: CCTTGCAAACTTATGAACCAAACCATATTGGGTTTT...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CAA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACGCGGAAAAGAGACTATaGATAGAGTTCACGGCAATC +
Preference number: 3 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDAEKRL*IEFTAI
Trigger: GATTGCCGTGAACTCTATCAATAGTCTCTTTTCCGC...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CAA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAAGAGTTCTCTCAGACTaGGTGGTGGTTGCAAACTTC +
Preference number: 3 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTRVLSD*VVVANF
Trigger: GAAGTTTGCAACCACCACCAAGTCTGAGAGAACTCT...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR CCA 72 bp AACCCACAGAATATCCCAGAGTTCTCTCAGACTTGGTaGTGGTTGCAAACTTCTAATGACTACTTATATTTG +
Preference number: 3 (lower is better)
Translates to: NPQNIPEFSQTW*WLQTSNDYLYL
Trigger: CAAATATAAGTAGTCATTAGAAGTTTGCAACCACCACCAAGTCTGAGAGAACTCTGGGATATTCTGTGGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR CCA 72 bp CAAAACCCACAGAATATCCCAGAGTTCTCTCAGACTTaGTGGTGGTTGCAAACTTCTAATGACTACTTATAT +
Preference number: 3 (lower is better)
Translates to: QNPQNIPEFSQT*WWLQTSNDYLY
Trigger: ATATAAGTAGTCATTAGAAGTTTGCAACCACCACCAAGTCTGAGAGAACTCTGGGATATTCTGTGGGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CAA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACACAGACTTGGTGGTGGTaGCAAACTTCTAATGACTAC +
Preference number: 3 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTQTWWW*QTSNDY
Trigger: GTAGTCATTAGAAGTTTGCAACCACCACCAAGTCTG...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CAA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACGTATTTGAGGCTATCTaGAGTCTCTGGTTGAGATCT +
Preference number: 3 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDVFEAI*SLWLRS
Trigger: AGATCTCAACCAGAGACTCAAGATAGCCTCAAATAC...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CAA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACCAGACTCACATCCATTaGGCTTTAACTAGAACTGTC +
Preference number: 3 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDQTHIH*ALTRTV
Trigger: GACAGTTCTAGTTAAAGCCAAATGGATGTGAGTCTG...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR-3UTR CAA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACCAGTACCAGAAAAATTaGGTCCATAAAAGGTGCATA +
Preference number: 3 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDQYQKN*VHKRCI
Trigger: TATGCACCTTTTATGGACCAAATTTTTCTGGTACTG...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357650.9
3UTR-3UTR CAA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACTACTGGCAGAAAAATTaGGTCCATAAAAGGTGCATA +
Preference number: 3 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDYWQKN*VHKRCI
Trigger: TATGCACCTTTTATGGACCAAATTTTTCTGCCAGTA...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370112.8
3UTR-3UTR CAA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAAACATACTCATGCATTaGTGTACTGATAGTACAGTC +
Preference number: 3 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTNILMH*CTDSTV
Trigger: GACTGTACTATCAGTACACAAATGCATGAGTATGTT...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR GCA 72 bp ATAGATTTGTTGTATTGCACTTGGGCAAATCATAATTaGTCACTTCAGCATATTCAAACCGAATCACAACAT +
Preference number: 3 (lower is better)
Translates to: IDLLYCTWANHN*SLQHIQTESQH
Trigger: ATGTTGTGATTCGGTTTGAATATGCTGAAGTGAGCAATTATGATTTGCCCAAGTGCAATACAACAAATCTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAAACTCCCCACAAAGCATaGACGGCTGACTCTACCCCG +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGETPHKA*TADSTP
Trigger: CGGGGTAGAGTCAGCCGTTCATGCTTTGTGGGGAGT...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357650.9
CDS-3UTR GCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAACCGGGCGTGGTGGCGTaGACCTGTAATTCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEPGVVA*TCNSSY
Trigger: GTAACTGGAATTACAGGTGCACGCCACCACGCCCGG...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAAGCTGGGATGAGAGGATaGTGGTGTGGGCATTCAACA +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEAGMRG*WCGHST
Trigger: TGTTGAATGCCCACACCACCATCCTCTCATCCCAGC...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357650.9
CDS-3UTR TCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAAACATGGCCATGTGCCTaGTCTAGAGCACCATTAAAG +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGETWPCA*SRAPLK
Trigger: CTTTAATGGTGCTCTAGATCAGGCACATGGCCATGT...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAAGGGGAGTTAGCAAACTaGGGAAGCTGTGGATATGTT +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEGELAN*GSCGYV
Trigger: AACATATCCACAGCTTCCTCAGTTTGCTAACTCCCC...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAAGAAATTCTTACTGGCTaGGATGAGAGGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEEILTG*DERMVV
Trigger: CACCACCATCCTCTCATCCCAGCCAGTAAGAATTTC...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357650.9
CDS-3UTR TCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAAGTGACTTTGAGCAAATaGGAGTTTTTCTGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEVTLSK*EFFWAS
Trigger: CGAAGCCCAGAAAAACTCTCATTTGCTCAAAGTCAC...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAATATAGAAAATTCAAGTaGCCCAGGTTCCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEYRKFK*PRFHSP
Trigger: GGGACTGTGGAACCTGGGTCACTTGAATTTTCTATA...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAAGTGATTTCCAGCAGCTaGAGTGAAGACATTCCAGAA +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEVISSS*SEDIPE
Trigger: TTCTGGAATGTCTTCACTGCAGCTGCTGGAAATCAC...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCGGGCAACATCTTCTCTaGCCGGCGAAGGGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGGQHLL*PAKGRV
Trigger: GACCCGGCCCTTCGCCGGGCAGAGAAGATGTTGCCC...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAACCACAAACCCAAGAATaGAAACAAGAAGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEPQTQE*KQEAVS
Trigger: AGAGACTGCTTCTTGTTTCCATTCTTGGGTTTGTGG...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAATCTCAGACTTGGTGGTaGTTGCAAACTTCTAATGAC +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGESQTWW*LQTSND
Trigger: GTCATTAGAAGTTTGCAACCACCACCAAGTCTGAGA...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAGGCAGGAGGATGACCTaGGGTCAGGAGTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAEGRRMT*GQESKT
Trigger: GGTCTTGGACTCCTGACCTCAGGTCATCCTCCTGCC...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAAATCTTTCACTGTATTTaGGGCTATCTTGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEIFHCI*GYLESL
Trigger: CAGAGACTCAAGATAGCCTCAAATACAGTGAAAGAT...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAATCTTTGAAGCACTGCTaGATTACATACACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGESLKHC*ITYTKQ
Trigger: CTGCTTTGTGTATGTAATTCAGCAGTGCTTCAAAGA...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAAAGACTGTCTGGTTCCTaGTTTGGCCATACAAAATAT +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGERLSGS*FGHTKY
Trigger: ATATTTTGTATGGCCAAATCAGGAACCAGACAGTCT...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAACATTCACTACATGGCTaGAAAGTCAATCTGTACGTA +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEHSLHG*KVNLYV
Trigger: TACGTACAGATTGACTTTGCAGCCATGTAGTGAATG...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAAGAGTGTATTGAGATCTaGTACAGCTTCTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEECIEI*YSFLDL
Trigger: AAGATCCAAGAAGCTGTAGCAGATCTCAATACACTC...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAACTGGGTACAATGTTTTaGATCGTACAGTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGELGTMF*IVQYQK
Trigger: TTTCTGGTACTGTACGATCCAAAACATTGTACCCAG...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357650.9
CDS-3UTR CCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAAAGGCAAATATTACACTaGAGAGGCAGCATAATAGAG +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGERQILH*RGSIIE
Trigger: CTCTATTATGCTGCCTCTCCAGTGTAATATTTGCCT...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCAGCACTTTGGGAGGCTaGGGTGGACGGATCACGAGG +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGSTLGG*GGRITR
Trigger: CCTCGTGATCCGTCCACCTCAGCCTCCCAAAGTGCT...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCGGGCAACATCTTCTCTaGCCGGCGAAGGGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFGQHLL*PAKGRV
Trigger: GACCCGGCCCTTCGCCGGGCAGAGAAGATGTTGCCC...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCAGGTGGAGGTTGCAGTaGGCTGAGACTGCGCCACTA +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGRWRLQ*AETAPL
Trigger: TAGTGGCGCAGTCTCAGCTCACTGCAACCTCCACCT...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAACAAATTGAACTTGGGTaGTTTGTATTCATCGTCTTT +
Preference number: 4 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEQIELG*FVFIVF
Trigger: AAAGACGATGAATACAAACCACCCAAGTTCAATTTG...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TATCCTTCCCCTGAGGGCTTACAGCTTTCCACAAAAGCTCAGTCTAACAGAAAACTGATATCCTTCCCCTaGGGGCTTACAGCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: YPSPEGLQLSTKAQSNRKLISFP*GLTAFH
Trigger: GTGGAAAGCTGTAAGCCCTCAGGGGAAGGATATCAG...TTTTCTGTTAGACTGAGCTTTTGTGGAAAGCTGTAAGCCCTCAGGGGAAGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000370111.4
CDS-3UTR TCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCCTGGAGGCCCACAACTaGAATTCTTACTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGLEAHN*NSYWLG
Trigger: TCCCAGCCAGTAAGAATTTCAGTTGTGGGCCTCCAG...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357650.9
CDS-3UTR TCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAATTCCAGCAGCTGCAGTaGAGACATTCCAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAEFQQLQ*RHSRRL
Trigger: CAGTCTTCTGGAATGTCTTCACTGCAGCTGCTGGAA...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCCTGAGATTATGCCACTaGACTCCAGCCTGGCTACAG +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGLRLCH*TPAWLQ
Trigger: CTGTAGCCAGGCTGGAGTGCAGTGGCATAATCTCAG...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACCCGGGCGTGGTGGCGTaGACCTGTAATTCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHPGVVA*TCNSSY
Trigger: GTAACTGGAATTACAGGTGCACGCCACCACGCCCGG...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAAGCAGTCTCTCATGGTaGACATCTGGAGGGGCTAAT +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAESSLSW*TSGGAN
Trigger: ATTAGCCCCTCCAGATGTCCACCATGAGAGACTGCT...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAATCTCTGGTTGAGATCTaGGTCACTAAGGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAESLVEI*VTKASG
Trigger: CCCAGAAGCCTTAGTGACCCAGATCTCAACCAGAGA...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCGGCAGGAGAATAGCTTaGACCCGGGAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFGRRIA*TREAEV
Trigger: AACCTCTGCTTCCCGGGTTCAAGCTATTCTCCTGCC...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACCCCTGGCCAACGTGGTaGAACCCTGTCTCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHPWPTW*NPVSAK
Trigger: TTTAGCAGAGACAGGGTTTCACCACGTTGGCCAGGG...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAGGCAGGAGGATGACCTaGGGTCAGGAGTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTGRRMT*GQESKT
Trigger: GGTCTTGGACTCCTGACCTCAGGTCATCCTCCTGCC...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAACTGGAGGCCCACAACTaGAATTCTTACTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAELEAHN*NSYWQK
Trigger: TTTCTGCCAGTAAGAATTTCAGTTGTGGGCCTCCAG...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370112.8
CDS-3UTR TCA 90 bp TATCCTTCCCCTGAGGGCTTACAGCTTTCCACAAAAGCTCAGTCTAACAGAAAAGTTAATTACTCAAGCTaGTATCCTTCCCCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: YPSPEGLQLSTKAQSNRKVNYSS*YPSPEG
Trigger: GCCCTCAGGGGAAGGATATCAGCTTGAGTAATTAAC...TTTTCTGTTAGACTGAGCTTTTGTGGAAAGCTGTAAGCCCTCAGGGGAAGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370111.4
CDS-3UTR CCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCCTAGAAGTGGCTCCGTaGGGTGATGGCAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFLEVAP*GDGSDS
Trigger: ACTGTCACTGCCATCACCCCACGGAGCCACTTCTAG...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAATGTATTCATCGTCTTTaGTGGACAGGGGCAACATCT +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAECIHRL*WTGATS
Trigger: AGATGTTGCCCCTGTCCATCAAAGACGATGAATACA...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCCCATTAAAGAGGGAATaGCTGTGTCCGTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFPLKRE*LCPWPE
Trigger: CTCTGGCCACGGACACAGTCATTCCCTCTTTAATGG...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACTCATGGCTATGGCAATaGTCGACATGGCCATGTGCC +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHSWLWQ*STWPCA
Trigger: GGCACATGGCCATGTCGATCATTGCCATAGCCATGA...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACGAATGGAGGGCTCTGTaGAAGGCAGACTTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHEWRAL*KADLGL
Trigger: AAGACCCAAGTCTGCCTTTCACAGAGCCCTCCATTC...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCGGGGAGTTAGCAAACTaGGGAAGCTGTGGATATGTT +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGGELAN*GSCGYV
Trigger: AACATATCCACAGCTTCCTCAGTTTGCTAACTCCCC...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAATATAGAAAATTCAAGTaGCCCAGGTTCCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAEYRKFK*PRFHSP
Trigger: GGGACTGTGGAACCTGGGTCACTTGAATTTTCTATA...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCTCAAGCCTAAGCAGTTaGTCCAGATGCCGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGSSLSS*SRCRRV
Trigger: TACTCTACGGCATCTGGAGCAACTGCTTAGGCTTGA...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAGAGTTCTCTCAGACTTaGTGGTGGTTGCAAACTTCT +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAEEFSQT*WWLQTS
Trigger: AGAAGTTTGCAACCACCACCAAGTCTGAGAGAACTC...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAGCTATCTTGAGTCTCTaGTTGAGATCTGGGTCACTA +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAEAILSL*LRSGSL
Trigger: TAGTGACCCAGATCTCAACCAGAGACTCAAGATAGC...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAATGCTTAAGGGAGTTCTaGTTCCTCTTTTTAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAECLREF*FLFLAC
Trigger: GCAGGCTAAAAAGAGGAACCAGAACTCCCTTAAGCA...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACCCATTAAAGAGGGAATaGCTGTGTCCGTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDPLKRE*LCPWPE
Trigger: CTCTGGCCACGGACACAGTCATTCCCTCTTTAATGG...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACTCATGGCTATGGCAATaGTCGACATGGCCATGTGCC +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDSWLWQ*STWPCA
Trigger: GGCACATGGCCATGTCGATCATTGCCATAGCCATGA...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACACTAGAAGTGGCTCCGTaGGGTGATGGCAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTLEVAP*GDGSDS
Trigger: ACTGTCACTGCCATCACCCCACGGAGCCACTTCTAG...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAATGTGAAAGGCAGACTTaGGTCTTCAAATATCTCCGT +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAECERQT*VFKYLR
Trigger: ACGGAGATATTTGAAGACCCAAGTCTGCCTTTCACA...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCGCTATCTTGAGTCTCTaGTTGAGATCTGGGTCACTA +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGAILSL*LRSGSL
Trigger: TAGTGACCCAGATCTCAACCAGAGACTCAAGATAGC...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR CAA 72 bp CCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTaGCCTGCGGAAAAGAGACTATTGATAGAGTTCACG +
Preference number: 4 (lower is better)
Translates to: PGSKQTCLENAT*PAEKRLLIEFT
Trigger: CGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAATCTTGCCGAACAAATTaGACTTGGGTGGTTTGTATT +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAESCRTN*TWVVCI
Trigger: AATACAAACCACCCAAGTTCAATTTGTTCGGCAAGA...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACAAGCAGAGGTTGCAGTaGGCTGAGATTATGCCACTG +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDKQRLQ*AEIMPL
Trigger: CAGTGGCATAATCTCAGCTCACTGCAACCTCTGCTT...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAATTCTCATCTGTAAAATaGGAGGTAGAACTACACTGC +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAEFSSVK*EVELHC
Trigger: GCAGTGTAGTTCTACCTCTCATTTTACAGATGAGAA...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAATCTTTGAAGCACTGCTaGATTACATACACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAESLKHC*ITYTKQ
Trigger: CTGCTTTGTGTATGTAATTCAGCAGTGCTTCAAAGA...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAAGCTTCTTGGATCTTTaGAGCACTGCTGAATTACAT +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAESFLDL*STAELH
Trigger: ATGTAATTCAGCAGTGCTTCAAAGATCCAAGAAGCT...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAGTATATGAAAAAGAATaGGCAGCTCATAGGGCTACT +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAEVYEKE*AAHRAT
Trigger: AGTAGCCCTATGAGCTGCTCATTCTTTTTCATATAC...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACAGCAGTTGCTCCAGATaGCGTAGAGTAGTTCCACAA +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHSSCSR*RRVVPQ
Trigger: TTGTGGAACTACTCTACGGCATCTGGAGCAACTGCT...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp TATCCTTCCCCTGAGGGCTTACAGCTTTCCACAAAAGCTCAGTCTAACAGAAAAAGGGGAGGAGTTCTCTaGATTAATATTCCAACAGAT +
Preference number: 4 (lower is better)
Translates to: YPSPEGLQLSTKAQSNRKRGGVL*INIPTD
Trigger: ATCTGTTGGAATATTAATGCAGAGAACTCCTCCCCT...TTTTCTGTTAGACTGAGCTTTTGTGGAAAGCTGTAAGCCCTCAGGGGAAGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370111.4
CDS-3UTR GCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACACCGGGAAGCAGAGGTTaGAGTGAGCTGAGATTATGC +
Preference number: 4 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTPGSRG*SELRLC
Trigger: GCATAATCTCAGCTCACTGCAACCTCTGCTTCCCGG...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAGAGTTCACGGCAATCTaGAGCAGTTTAGAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAEEFTAI*SSLEKN
Trigger: ATTCTTTTCTAAACTGCTGCAGATTGCCGTGAACTC...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR CAA 72 bp TTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATaGATAGAGTTCACGGCAATCTGCAGCAGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: LENATLPAEKRL*IEFTAICSSLE
Trigger: TTCTAAACTGCTGCAGATTGCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
3UTR CAA 72 bp ATAAATCAAAGACACCCTTGTCAGACTCACATCCATTaGGCTTTAACTAGAACTGTCCTTCCCTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: INQRHPCQTHIH*ALTRTVLPCSF
Trigger: AAAGGAGCAGGGAAGGACAGTTCTAGTTAAAGCCAAATGGATGTGAGTCTGACAAGGGTGTCTTTGATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAACTATCGAAAAACATGTaGAAAGAGTCGGAAATCAAG +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAELSKNM*KESEIK
Trigger: CTTGATTTCCGACTCTTTTCACATGTTTTTCGATAG...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAATTATCTCTCCATTTTaGAATAACAGAAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAEIISPF*NNRSCQ
Trigger: CTGGCAGCTTCTGTTATTTCAAAATGGAGAGATAAT...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACACATGGCCATGTGCCTaGTCTAGAGCACCATTAAAG +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDTWPCA*SRAPLK
Trigger: CTTTAATGGTGCTCTAGATCAGGCACATGGCCATGT...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAACAAAATTTTGCATCATaGTGGCAGAAGCAATTACAC +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAEQNFAS*WQKQLH
Trigger: GTGTAATTGCTTCTGCCATCATGATGCAAAATTTTG...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCGATACAAAGGCACTTTaGAAACCCAATATGGTTTGG +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGDTKAL*KPNMVW
Trigger: CCAAACCATATTGGGTTTTCAAAGTGCCTTTGTATC...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAAAGCAGAGGTTGCAGTaGGCTGAGATTATGCCACTG +
Preference number: 4 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTKQRLQ*AEIMPL
Trigger: CAGTGGCATAATCTCAGCTCACTGCAACCTCTGCTT...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCTTGGCATTTGAAGAATaGAAAAGCCAAACAGCACTG +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGLAFEE*KSQTAL
Trigger: CAGTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAA...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCGGTTTTCAGGAATGCTaGCAAATTCCAGATATAAGG +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGGFQEC*QIPDIR
Trigger: CCTTATATCTGGAATTTGTCAGCATTCCTGAAAACC...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCCATTTACTCAGCATGTaGATCCATGCTAAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGHLLSM*IHAKFE
Trigger: CTCAAACTTAGCATGGATTCACATGCTGAGTAAATG...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACAGCAGTTGCTCCAGATaGCGTAGAGTAGTTCCACAA +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDSSCSR*RRVVPQ
Trigger: TTGTGGAACTACTCTACGGCATCTGGAGCAACTGCT...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCAGACTTGGTGGTGGTTaGAAACTTCTAATGACTACT +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGRLGGG*KLLMTT
Trigger: AGTAGTCATTAGAAGTTTGCAACCACCACCAAGTCT...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACCCAGTCCAGCCAAAATaGCAGTGCTATCGAAAAACA +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHPVQPK*QCYRKT
Trigger: TGTTTTTCGATAGCACTGCCATTTTGGCTGGACTGG...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAAGCAGTCTCTCATGGTaGACATCTGGAGGGGCTAAT +
Preference number: 4 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTSSLSW*TSGGAN
Trigger: ATTAGCCCCTCCAGATGTCCACCATGAGAGACTGCT...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAGTAAAATCTGTCTGCTaGGTCCTGTTGTTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAEVKSVC*VLLFLL
Trigger: TAAAAGAAACAACAGGACCCAGCAGACAGATTTTAC...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCGAGTTCTCTCAGACTTaGTGGTGGTTGCAAACTTCT +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFEFSQT*WWLQTS
Trigger: AGAAGTTTGCAACCACCACCAAGTCTGAGAGAACTC...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCCTTCACAAAGATGCATaGGGAGTTAGCAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFLHKDA*GVSKLR
Trigger: CCTCAGTTTGCTAACTCCCCATGCATCTTTGTGAAG...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACAGCTTTTCCAGTGACTaGAAGCCAACACGACAAGAA +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHSFSSD*KPTRQE
Trigger: TTCTTGTCGTGTTGGCTTCCAGTCACTGGAAAAGCT...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCAGCTTTTCCAGTGACTaGAAGCCAACACGACAAGAA +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFSFSSD*KPTRQE
Trigger: TTCTTGTCGTGTTGGCTTCCAGTCACTGGAAAAGCT...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACATCTCTGGTTGAGATCTaGGTCACTAAGGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTSLVEI*VTKASG
Trigger: CCCAGAAGCCTTAGTGACCCAGATCTCAACCAGAGA...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCTCTGCTACAGCTTCTTaGATCTTTGAAGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFSATAS*IFEALL
Trigger: CAGCAGTGCTTCAAAGATCCAAGAAGCTGTAGCAGA...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp TATCCTTCCCCTGAGGGCTTACAGCTTTCCACAAAAGCTCAGTCTAACAGAAAATTAGTGAAAGCAAAATaGGCAAAACTTGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: YPSPEGLQLSTKAQSNRKLVKAK*AKLGLF
Trigger: AAAGAGCCCAAGTTTTGCCCATTTTGCTTTCACTAA...TTTTCTGTTAGACTGAGCTTTTGTGGAAAGCTGTAAGCCCTCAGGGGAAGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000370111.4
CDS-3UTR TCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCTCAAAAATAGGCCATTaGCAAAGCCAGCCAGAACTT +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFSKIGH*QSQPEL
Trigger: AAGTTCTGGCTGGCTTTGTCAATGGCCTATTTTTGA...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCAACATACATGACTCTTaGTGGTACATTTCTATGCTG +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGNIHDS*WYISML
Trigger: CAGCATAGAAATGTACCATCAAGAGTCATGTATGTT...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACCCAACACGACAAGAATaGAATGGTATGACCTGTGAA +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHPTRQE*NGMTCE
Trigger: TTCACAGGTCATACCATTTCATTCTTGTCGTGTTGG...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACGCAGATGTCAGCACCTaGTTAATCAGTACTCTACTA +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHADVST*LISTLL
Trigger: TAGTAGAGTACTGATTAATCAGGTGCTGACATCTGC...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCGCAGATGTCAGCACCTaGTTAATCAGTACTCTACTA +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFADVST*LISTLL
Trigger: TAGTAGAGTACTGATTAATCAGGTGCTGACATCTGC...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCATCAGACCAAAATTTTaGATCATGATGGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGIRPKF*IMMAEA
Trigger: TGCTTCTGCCATCATGATGCAAAATTTTGGTCTGAT...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAATGGGCAAATCATAATTaGTCACTTCAGCATATTCAA +
Preference number: 4 (lower is better)
Translates to: KPPGSKQTCLENATLPAEWANHN*SLQHIQ
Trigger: TTGAATATGCTGAAGTGAGCAATTATGATTTGCCCA...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACTGCTTAAGGGAGTTCTaGTTCCTCTTTTTAGCCTGC +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDCLREF*FLFLAC
Trigger: GCAGGCTAAAAAGAGGAACCAGAACTCCCTTAAGCA...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACTCTTGCCGAACAAATTaGACTTGGGTGGTTTGTATT +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHSCRTN*TWVVCI
Trigger: AATACAAACCACCCAAGTTCAATTTGTTCGGCAAGA...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACTCAAAAATAGGCCATTaGCAAAGCCAGCCAGAACTT +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDSKIGH*QSQPEL
Trigger: AAGTTCTGGCTGGCTTTGTCAATGGCCTATTTTTGA...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACTTGGCATTTGAAGAATaGAAAAGCCAAACAGCACTG +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHLAFEE*KSQTAL
Trigger: CAGTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAA...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCATCTTTCACTGTATTTaGGGCTATCTTGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFIFHCI*GYLESL
Trigger: CAGAGACTCAAGATAGCCTCAAATACAGTGAAAGAT...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACTATAGGAGAGTGTATTaGGATCTGCTACAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHYRRVY*DLLQLL
Trigger: AAGAAGCTGTAGCAGATCTCAATACACTCTCCTATA...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACCATTTACTCAGCATGTaGATCCATGCTAAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHHLLSM*IHAKFE
Trigger: CTCAAACTTAGCATGGATTCACATGCTGAGTAAATG...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCGTATATGAAAAAGAATaGGCAGCTCATAGGGCTACT +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFVYEKE*AAHRAT
Trigger: AGTAGCCCTATGAGCTGCTCATTCTTTTTCATATAC...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCCTTGTAAAATCTGTCTaGTGGGTCCTGTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFLVKSV*WVLLFL
Trigger: AAGAAACAACAGGACCCAGCAGACAGATTTTACAAG...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCAGGGGAGGAGTTCTCTaGATTAATATTCCAACAGAT +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFRGGVL*INIPTD
Trigger: ATCTGTTGGAATATTAATGCAGAGAACTCCTCCCCT...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACCATTCACTACATGGCTaGAAAGTCAATCTGTACGTA +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHHSLHG*KVNLYV
Trigger: TACGTACAGATTGACTTTGCAGCCATGTAGTGAATG...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACAGACTTGGTGGTGGTTaGAAACTTCTAATGACTACT +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHRLGGG*KLLMTT
Trigger: AGTAGTCATTAGAAGTTTGCAACCACCACCAAGTCT...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCTACTTATCCTTCTCCTaGAGTGCAAAATTACTTGTA +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGYLSFS*SAKLLV
Trigger: TACAAGTAATTTTGCACTGCAGGAGAAGGATAAGTA...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCTGGGCAAATCATAATTaGTCACTTCAGCATATTCAA +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGWANHN*SLQHIQ
Trigger: TTGAATATGCTGAAGTGAGCAATTATGATTTGCCCA...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCTATCCAAACCTATGCTaGAAGTACACAAAAAGACAA +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGYPNLC*KYTKRQ
Trigger: TTGTCTTTTTGTGTACTTCCAGCATAGGTTTGGATA...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACTGTGAAAGGCAGACTTaGGTCTTCAAATATCTCCGT +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDCERQT*VFKYLR
Trigger: ACGGAGATATTTGAAGACCCAAGTCTGCCTTTCACA...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCAAAGGCATAGCATTTTaGTTACTGATATACACGTGT +
Preference number: 4 (lower is better)
Translates to: FRKCHFACGKETIDRVHGKGIAF*LLIYTC
Trigger: ACACGTGTATATCAGTAACCAAAATGCTATGCCTTT...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACATCTGCTACAGCTTCTTaGATCTTTGAAGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTSATAS*IFEALL
Trigger: CAGCAGTGCTTCAAAGATCCAAGAAGCTGTAGCAGA...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACCTATCGAAAAACATGTaGAAAGAGTCGGAAATCAAG +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHLSKNM*KESEIK
Trigger: CTTGATTTCCGACTCTTTTCACATGTTTTTCGATAG...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACCAAAATTTTGCATCATaGTGGCAGAAGCAATTACAC +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHQNFAS*WQKQLH
Trigger: GTGTAATTGCTTCTGCCATCATGATGCAAAATTTTG...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACGATACAAAGGCACTTTaGAAACCCAATATGGTTTGG +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDDTKAL*KPNMVW
Trigger: CCAAACCATATTGGGTTTTCAAAGTGCCTTTGTATC...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCAAGGTAAACTGTCCCTaGGCAATACAAATTTGTTGT +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFKVNCP*AIQICC
Trigger: ACAACAAATTTGTATTGCTCAGGGACAGTTTACCTT...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACACCAACACGACAAGAATaGAATGGTATGACCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTPTRQE*NGMTCE
Trigger: TTCACAGGTCATACCATTTCATTCTTGTCGTGTTGG...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCCAACAAGCCTTCCAATaGATGTCCAAAGAAAAACAT +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFQQAFQ*MSKEKH
Trigger: ATGTTTTTCTTTGGACATTCATTGGAAGGCTTGTTG...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACGAATTAGAGGAGATTTaGAAATGCTCCGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHELEEI*KCSVNH
Trigger: ATGATTGACGGAGCATTTTCAAATCTCCTCTAATTC...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCTACTTCCACTGTATATaGAAAAGAATGAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFYFHCI*KRMSSS
Trigger: TGAGCTGCTCATTCTTTTTCATATACAGTGGAAGTA...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACAGACTGTCTGGTTCCTaGTTTGGCCATACAAAATAT +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDRLSGS*FGHTKY
Trigger: ATATTTTGTATGGCCAAATCAGGAACCAGACAGTCT...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACAGGGGAGGAGTTCTCTaGATTAATATTCCAACAGAT +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDRGGVL*INIPTD
Trigger: ATCTGTTGGAATATTAATGCAGAGAACTCCTCCCCT...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCATCAACAGGGATTTCTaGCACATCACTAAAAAGTAC +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFINRDF*HITKKY
Trigger: GTACTTTTTAGTGATGTGGCAGAAATCCCTGTTGAT...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACGAGTTCACGGCAATCTaGAGCAGTTTAGAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDEFTAI*SSLEKN
Trigger: ATTCTTTTCTAAACTGCTGCAGATTGCCGTGAACTC...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACACCACAAACCCAAGAATaGAAACAAGAAGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTPQTQE*KQEAVS
Trigger: AGAGACTGCTTCTTGTTTCCATTCTTGGGTTTGTGG...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCGTAAAATCTGTCTGCTaGGTCCTGTTGTTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFVKSVC*VLLFLL
Trigger: TAAAAGAAACAACAGGACCCAGCAGACAGATTTTAC...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACAACATACATGACTCTTaGTGGTACATTTCTATGCTG +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDNIHDS*WYISML
Trigger: CAGCATAGAAATGTACCATCAAGAGTCATGTATGTT...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAGGTTTTCAGGAATGCTaGCAAATTCCAGATATAAGG +
Preference number: 4 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTGFQEC*QIPDIR
Trigger: CCTTATATCTGGAATTTGTCAGCATTCCTGAAAACC...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACTACATTTTGAGTTCATaGTTTGGCTGCTGTACAAAG +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDYILSS*FGCCTK
Trigger: CTTTGTACAGCAGCCAAATCATGAACTCAAAATGTA...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACATTCTCATCTGTAAAATaGGAGGTAGAACTACACTGC +
Preference number: 4 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTFSSVK*EVELHC
Trigger: GCAGTGTAGTTCTACCTCTCATTTTACAGATGAGAA...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACATCAACAGGGATTTCTaGCACATCACTAAAAAGTAC +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDINRDF*HITKKY
Trigger: GTACTTTTTAGTGATGTGGCAGAAATCCCTGTTGAT...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCCAAATTGAACTTGGGTaGTTTGTATTCATCGTCTTT +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFQIELG*FVFIVF
Trigger: AAAGACGATGAATACAAACCACCCAAGTTCAATTTG...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCAAACCCAATATGGTTTaGTTCATAAGTTTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFKPNMV*FISLQG
Trigger: ACCTTGCAAACTTATGAACCAAACCATATTGGGTTT...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCAAAGGCATAGCATTTTaGTTACTGATATACACGTGT +
Preference number: 4 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFKGIAF*LLIYTC
Trigger: ACACGTGTATATCAGTAACCAAAATGCTATGCCTTT...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACATTTGAGTTCATGATTTaGCTGCTGTACAAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTFEFMI*LLYKGA
Trigger: TGCACCTTTGTACAGCAGCCAAATCATGAACTCAAA...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAATTATCTCTCCATTTTaGAATAACAGAAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTIISPF*NNRSCQ
Trigger: CTGGCAGCTTCTGTTATTTCAAAATGGAGAGATAAT...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR TCA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACATACTTCCACTGTATATaGAAAAGAATGAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTYFHCI*KRMSSS
Trigger: TGAGCTGCTCATTCTTTTTCATATACAGTGGAAGTA...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR GCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACTACTTATCCTTCTCCTaGAGTGCAAAATTACTTGTA +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDYLSFS*SAKLLV
Trigger: TACAAGTAATTTTGCACTGCAGGAGAAGGATAAGTA...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACAAACCCAATATGGTTTaGTTCATAAGTTTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDKPNMV*FISLQG
Trigger: ACCTTGCAAACTTATGAACCAAACCATATTGGGTTT...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CCA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACTATCCAAACCTATGCTaGAAGTACACAAAAAGACAA +
Preference number: 4 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDYPNLC*KYTKRQ
Trigger: TTGTCTTTTTGTGTACTTCCAGCATAGGTTTGGATA...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS GCA 90 bp GCCTCAAACGGGAATCCCCAGCGCTTGTCCGGGGCCGCGCGCCGCTaGGAGACACAGACAGACACAGACACACACCCGGGAATTCGCTTA +
Preference number: 5 (lower is better)
Translates to: ASNGNPQRLSGAARR*ETQTDTDTHPGIRL
Trigger: TAAGCGAATTCCCGGGTGTGTGTCTGTGTCTGTCTGTGTCTCGCAGCGGCGCGCGGCCCCGGACAAGCGCTGGGGATTCCCGTTTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS CCA 90 bp TGCCCGGCGAAGGGCCGGGTCTACTCCCCTCTAGAAGTGGCTCCGTaGGGTGATGGCAGTGACAGTAGTGACGCCTCAAACGGGAATCCC +
Preference number: 5 (lower is better)
Translates to: CPAKGRVYSPLEVAP*GDGSDSSDASNGNP
Trigger: GGGATTCCCGTTTGAGGCGTCACTACTGTCACTGCCATCACCCCACGGAGCCACTTCTAGAGGGGAGTAGACCCGGCCCTTCGCCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS GCA 90 bp TGGTTTGTATTCATCGTCTTTGATGGACAGGGGCAACATCTTCTCTaGCCGGCGAAGGGCCGGGTCTACTCCCCTCTAGAAGTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: WFVFIVFDGQGQHLL*PAKGRVYSPLEVAP
Trigger: CGGAGCCACTTCTAGAGGGGAGTAGACCCGGCCCTTCGCCGGGCAGAGAAGATGTTGCCCCTGTCCATCAAAGACGATGAATACAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAACAGACTTGGTGGTGGTaGCAAACTTCTAATGACTAC +
Preference number: 5 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEQTWWW*QTSNDY
Trigger: GTAGTCATTAGAAGTTTGCAACCACCACCAAGTCTG...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAACATCAGACCAAAATTTaGCATCATGATGGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEHQTKI*HHDGRS
Trigger: GCTTCTGCCATCATGATGCAAAATTTTGGTCTGATG...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAATTGAACTTGGGTGGTTaGTATTCATCGTCTTTGATG +
Preference number: 5 (lower is better)
Translates to: AWWHTPIVAATQKAEAGELNLGG*YSSSLM
Trigger: CATCAAAGACGATGAATACAAACCACCCAAGTTCAA...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAACAGTACCAGAAAAATTaGGTCCATAAAAGGTGCATA +
Preference number: 5 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEQYQKN*VHKRCI
Trigger: TATGCACCTTTTATGGACCAAATTTTTCTGGTACTG...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357650.9
CDS-3UTR CAA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAAAAAACCCAATATGGTTaGGTTCATAAGTTTGCAAGG +
Preference number: 5 (lower is better)
Translates to: AWWHTPIVAATQKAEAGEKTQYG*VHKFAR
Trigger: CCTTGCAAACTTATGAACCAAACCATATTGGGTTTT...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp GCATGGTGGCACACGCCCATAGTCGCAGCTACTCAGAAGGCTGAGGCAGGAGAAAGAATTAGAGGAGATTaGAAAATGCTCCGTCAATCA +
Preference number: 5 (lower is better)
Translates to: AWWHTPIVAATQKAEAGERIRGD*KMLRQS
Trigger: TGATTGACGGAGCATTTTCAAATCTCCTCTAATTCT...TTCTCCTGCCTCAGCCTTCTGAGTAGCTGCGACTATGGGCGTGTGCCACCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS TCA 90 bp GAAGCTGCCAGTCCAGCCAAAATGGCAGTGCTATCGAAAAACATGTaGAAAGAGTCGGAAATCAAGCCTAAGCAGTTGCTCCAGATGCCG +
Preference number: 5 (lower is better)
Translates to: EAASPAKMAVLSKNM*KESEIKPKQLLQMP
Trigger: CGGCATCTGGAGCAACTGCTTAGGCTTGATTTCCGACTCTTTTCACATGTTTTTCGATAGCACTGCCATTTTGGCTGGACTGGCAGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS CCA 90 bp AGACCTAAACCAGCCCGAGATCTTGCCGAACAAATTGAACTTGGGTaGTTTGTATTCATCGTCTTTGATGGACAGGGGCAACATCTTCTC +
Preference number: 5 (lower is better)
Translates to: RPKPARDLAEQIELG*FVFIVFDGQGQHLL
Trigger: GAGAAGATGTTGCCCCTGTCCATCAAAGACGATGAATACAAACCACCCAAGTTCAATTTGTTCGGCAAGATCTCGGGCTGGTTTAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAAGGTTCCGGGAAGTCTaGTCGGACAGTATAGACCTA +
Preference number: 5 (lower is better)
Translates to: KPPGSKQTCLENATLPAERFREV*SDSIDL
Trigger: TAGGTCTATACTGTCCGACAAGACTTCCCGGAACCT...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAAACCAGCCCGAGATCTaGCCGAACAAATTGAACTTG +
Preference number: 5 (lower is better)
Translates to: KPPGSKQTCLENATLPAENQPEI*PNKLNL
Trigger: CAAGTTCAATTTGTTCGGCAAGATCTCGGGCTGGTT...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS GCA 90 bp ATGAGAATGAAAGTGTCCATGTCCATGAGCATGATCATGGCTATGTaGAGCACCATGTTTCACTTCATGGCTATGGCAATGATCGACATG +
Preference number: 5 (lower is better)
Translates to: MRMKVSMSMSMIMAM*STMFHFMAMAMIDM
Trigger: CATGTCGATCATTGCCATAGCCATGAAGTGAAACATGGTGCTGCACATAGCCATGATCATGCTCATGGACATGGACACTTTCATTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCGTCTGCTGGGTCCTGTaGTTTCTTTTAAGGACGGGC +
Preference number: 5 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFVCWVL*FLLRTG
Trigger: GCCCGTCCTTAAAAGAAACAACAGGACCCAGCAGAC...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAGCTGGGTACAATGTTTaGGATCGTACAGTACCAGAA +
Preference number: 5 (lower is better)
Translates to: KPPGSKQTCLENATLPAEAGYNV*DRTVPE
Trigger: TTCTGGTACTGTACGATCCAAAACATTGTACCCAGC...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357650.9
CDS-3UTR CAA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAACAGACTTGGTGGTGGTaGCAAACTTCTAATGACTAC +
Preference number: 5 (lower is better)
Translates to: KPPGSKQTCLENATLPAEQTWWW*QTSNDY
Trigger: GTAGTCATTAGAAGTTTGCAACCACCACCAAGTCTG...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS TCA 90 bp CGCTCTAACATACCCATAGGAGAAAGCATCATTATCTCTCCATTTTaGAATAACAGAAGCTGCCAGTCCAGCCAAAATGGCAGTGCTATC +
Preference number: 5 (lower is better)
Translates to: RSNIPIGESIIISPF*NNRSCQSSQNGSAI
Trigger: GATAGCACTGCCATTTTGGCTGGACTGGCAGCTTCTGTTATTTCAAAATGGAGAGATAATGATGCTTTCTCCTATGGGTATGTTAGAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACGTCTGCTGGGTCCTGTaGTTTCTTTTAAGGACGGGC +
Preference number: 5 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDVCWVL*FLLRTG
Trigger: GCCCGTCCTTAAAAGAAACAACAGGACCCAGCAGAC...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAGTATTTGAGGCTATCTaGAGTCTCTGGTTGAGATCT +
Preference number: 5 (lower is better)
Translates to: KPPGSKQTCLENATLPAEVFEAI*SLWLRS
Trigger: AGATCTCAACCAGAGACTCAAGATAGCCTCAAATAC...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAAGGATACAAAGGCACTTaGAAAACCCAATATGGTTTG +
Preference number: 5 (lower is better)
Translates to: KPPGSKQTCLENATLPAEGYKGT*KTQYGL
Trigger: CAAACCATATTGGGTTTTCAAAGTGCCTTTGTATCC...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCTTAGAAAATGCCACTTaGCCTGCGGAAAAGAGACTA +
Preference number: 5 (lower is better)
Translates to: FRKCHFACGKETIDRVHGLENAT*PAEKRL
Trigger: TAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAA...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACTTGTATTCATCGTCTTaGATGGACAGGGGCAACATC +
Preference number: 5 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHLYSSS*MDRGNI
Trigger: GATGTTGCCCCTGTCCATCAAAGACGATGAATACAA...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACAACCAGCCCGAGATCTaGCCGAACAAATTGAACTTG +
Preference number: 5 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDNQPEI*PNKLNL
Trigger: CAAGTTCAATTTGTTCGGCAAGATCTCGGGCTGGTT...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAAGGTTCCGGGAAGTCTaGTCGGACAGTATAGACCTA +
Preference number: 5 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTRFREV*SDSIDL
Trigger: TAGGTCTATACTGTCCGACAAGACTTCCCGGAACCT...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCGCGGAAAAGAGACTATaGATAGAGTTCACGGCAATC +
Preference number: 5 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFAEKRL*IEFTAI
Trigger: GATTGCCGTGAACTCTATCAATAGTCTCTTTTCCGC...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACGCGGAAAAGAGACTATaGATAGAGTTCACGGCAATC +
Preference number: 5 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHAEKRL*IEFTAI
Trigger: GATTGCCGTGAACTCTATCAATAGTCTCTTTTCCGC...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp TTTAGAAAATGCCACTTTGCCTGCGGAAAAGAGACTATTGATAGAGTTCACGGCAAATCAAAGACACCCTaGTCAGACTCACATCCATTT +
Preference number: 5 (lower is better)
Translates to: FRKCHFACGKETIDRVHGKSKTP*SDSHPF
Trigger: AAATGGATGTGAGTCTGACAAGGGTGTCTTTGATTT...GCCGTGAACTCTATCAATAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp AAACCACCTGGCAGTAAGCAAACATGTTTAGAAAATGCCACTTTGCCTGCGGAATGTCTGGTTCCTGATTaGGCCATACAAAATATAGAA +
Preference number: 5 (lower is better)
Translates to: KPPGSKQTCLENATLPAECLVPD*AIQNIE
Trigger: TTCTATATTTTGTATGGCCAAATCAGGAACCAGACA...TTCCGCAGGCAAAGTGGCATTTTCTAAACATGTTTGCTTACTGCCAGGTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACCATCAGACCAAAATTTaGCATCATGATGGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHHQTKI*HHDGRS
Trigger: GCTTCTGCCATCATGATGCAAAATTTTGGTCTGATG...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACTTAGAAAATGCCACTTaGCCTGCGGAAAAGAGACTA +
Preference number: 5 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHLENAT*PAEKRL
Trigger: TAGTCTCTTTTCCGCAGGCAAAGTGGCATTTTCTAA...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCCAGACTCACATCCATTaGGCTTTAACTAGAACTGTC +
Preference number: 5 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFQTHIH*ALTRTV
Trigger: GACAGTTCTAGTTAAAGCCAAATGGATGTGAGTCTG...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACATTGTATTCATCGTCTTaGATGGACAGGGGCAACATC +
Preference number: 5 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTLYSSS*MDRGNI
Trigger: GATGTTGCCCCTGTCCATCAAAGACGATGAATACAA...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCTTGAACTTGGGTGGTTaGTATTCATCGTCTTTGATG +
Preference number: 5 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFLNLGG*YSSSLM
Trigger: CATCAAAGACGATGAATACAAACCACCCAAGTTCAA...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCGGATACAAAGGCACTTaGAAAACCCAATATGGTTTG +
Preference number: 5 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFGYKGT*KTQYGL
Trigger: CAAACCATATTGGGTTTTCAAAGTGCCTTTGTATCC...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp AGGAAAACAAAGTGGATGACTTGGCATTTGAAGAATGAAAAAGCCAAACAGCACAATGTTAATGCCAACTaGCTAAATGATATGCGCTGG +
Preference number: 5 (lower is better)
Translates to: RKTKWMTWHLKNEKAKQHNVNAN*LNDMRW
Trigger: CCAGCGCATATCATTTAGCAAGTTGGCATTAACATT...GTGCTGTTTGGCTTTTTCATTCTTCAAATGCCAAGTCATCCACTTTGTTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACACCGAACAAATTGAACTaGGGTGGTTTGTATTCATCG +
Preference number: 5 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTPNKLN*GGLYSS
Trigger: CGATGAATACAAACCACCCAAGTTCAATTTGTTCGG...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp AGCACTTACTTCCTAGATACCTGTGTTAGGAAAAGTTCTACATCACCACATTTCAACATACTCATGCATTaGTGTACTGATAGTACAGTC +
Preference number: 5 (lower is better)
Translates to: STYFLDTCVRKSSTSPHFNILMH*CTDSTV
Trigger: GACTGTACTATCAGTACACAAATGCATGAGTATGTT...GAAATGTGGTGATGTAGAACTTTTCCTAACACAGGTATCTAGGAAGTAAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACAATGTTAATGCCAACTaGCTAAATGATATGCGCTGG +
Preference number: 5 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDNVNAN*LNDMRW
Trigger: CCAGCGCATATCATTTAGCAAGTTGGCATTAACATT...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACACAGACTCACATCCATTaGGCTTTAACTAGAACTGTC +
Preference number: 5 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTQTHIH*ALTRTV
Trigger: GACAGTTCTAGTTAAAGCCAAATGGATGTGAGTCTG...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACAAATCAAAGACACCCTaGTCAGACTCACATCCATTT +
Preference number: 5 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDKSKTP*SDSHPF
Trigger: AAATGGATGTGAGTCTGACAAGGGTGTCTTTGATTT...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp TGTAGTGATGTCTTTAAAGCACCTTCAAGAAAGACCTCTTTCATTTTGGATGACAACATACTCATGCATTaGTGTACTGATAGTACAGTC +
Preference number: 5 (lower is better)
Translates to: CSDVFKAPSRKTSFILDDNILMH*CTDSTV
Trigger: GACTGTACTATCAGTACACAAATGCATGAGTATGTT...GTCATCCAAAATGAAAGAGGTCTTTCTTGAAGGTGCTTTAAAGACATCACTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS GCA 90 bp ATAAGAATTGAACAGATAGGATCTGCTATCATCAGACCAAAATTTTaGATCATGATGGCAGAAGCAATTACACCAATACTTCCAAGTGTA +
Preference number: 5 (lower is better)
Translates to: IRIEQIGSAIIRPKF*IMMAEAITPILPSV
Trigger: TACACTTGGAAGTATTGGTGTAATTGCTTCTGCCATCATGATGCAAAATTTTGGTCTGATGATAGCAGATCCTATCTGTTCAATTCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACAAGAATTAGAGGAGATTaGAAAATGCTCCGTCAATCA +
Preference number: 5 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTRIRGD*KMLRQS
Trigger: TGATTGACGGAGCATTTTCAAATCTCCTCTAATTCT...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACATGTCTGGTTCCTGATTaGGCCATACAAAATATAGAA +
Preference number: 5 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTCLVPD*AIQNIE
Trigger: TTCTATATTTTGTATGGCCAAATCAGGAACCAGACA...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS-3UTR CAA 90 bp CTAGTTCAAAATAGAATCTTCATTGAGGCTAACTGTAGCACAGTATGTGATACATACTGGCAGAAAAATTaGGTCCATAAAAGGTGCATA +
Preference number: 5 (lower is better)
Translates to: LVQNRIFIEANCSTVCDTYWQKN*VHKRCI
Trigger: TATGCACCTTTTATGGACCAAATTTTTCTGCCAGTA...TGTATCACATACTGTGCTACAGTTAGCCTCAATGAAGATTCTATTTTGAACTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370112.8
CDS GCA 72 bp GGGAATCCCCAGCGCTTGTCCGGGGCCGCGCGCCGCTaGGAGACACAGACAGACACAGACACACACCCGGGA +
Preference number: 6 (lower is better)
Translates to: GNPQRLSGAARR*ETQTDTDTHPG
Trigger: TCCCGGGTGTGTGTCTGTGTCTGTCTGTGTCTCGCAGCGGCGCGCGGCCCCGGACAAGCGCTGGGGATTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS CAA 72 bp GACAGTAGTGACGCCTCAAACGGGAATCCCCAGCGCTaGTCCGGGGCCGCGCGCCGCTGCGAGACACAGACA +
Preference number: 6 (lower is better)
Translates to: DSSDASNGNPQR*SGAARRCETQT
Trigger: TGTCTGTGTCTCGCAGCGGCGCGCGGCCCCGGACAAGCGCTGGGGATTCCCGTTTGAGGCGTCACTACTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS CAA 90 bp GATGGCAGTGACAGTAGTGACGCCTCAAACGGGAATCCCCAGCGCTaGTCCGGGGCCGCGCGCCGCTGCGAGACACAGACAGACACAGAC +
Preference number: 6 (lower is better)
Translates to: DGSDSSDASNGNPQR*SGAARRCETQTDTD
Trigger: GTCTGTGTCTGTCTGTGTCTCGCAGCGGCGCGCGGCCCCGGACAAGCGCTGGGGATTCCCGTTTGAGGCGTCACTACTGTCACTGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS CCA 72 bp AAGGGCCGGGTCTACTCCCCTCTAGAAGTGGCTCCGTaGGGTGATGGCAGTGACAGTAGTGACGCCTCAAAC +
Preference number: 6 (lower is better)
Translates to: KGRVYSPLEVAP*GDGSDSSDASN
Trigger: GTTTGAGGCGTCACTACTGTCACTGCCATCACCCCACGGAGCCACTTCTAGAGGGGAGTAGACCCGGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS CAA 90 bp ATCTTGCCGAACAAATTGAACTTGGGTGGTTTGTATTCATCGTCTTaGATGGACAGGGGCAACATCTTCTCTGCCCGGCGAAGGGCCGGG +
Preference number: 6 (lower is better)
Translates to: ILPNKLNLGGLYSSS*MDRGNIFSARRRAG
Trigger: CCCGGCCCTTCGCCGGGCAGAGAAGATGTTGCCCCTGTCCATCAAAGACGATGAATACAAACCACCCAAGTTCAATTTGTTCGGCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS CAA 72 bp TTCAGGCACAGGAAGAAAAACAGGTTCCGGGAAGTCTaGTCGGACAGTATAGACCTAAACCAGCCCGAGATC +
Preference number: 6 (lower is better)
Translates to: FRHRKKNRFREV*SDSIDLNQPEI
Trigger: GATCTCGGGCTGGTTTAGGTCTATACTGTCCGACAAGACTTCCCGGAACCTGTTTTTCTTCCTGTGCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS CCA 72 bp CCAGCCCGAGATCTTGCCGAACAAATTGAACTTGGGTaGTTTGTATTCATCGTCTTTGATGGACAGGGGCAA +
Preference number: 6 (lower is better)
Translates to: PARDLAEQIELG*FVFIVFDGQGQ
Trigger: TTGCCCCTGTCCATCAAAGACGATGAATACAAACCACCCAAGTTCAATTTGTTCGGCAAGATCTCGGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS CAA 90 bp CTAAACCAGCCCGAGATCTTGCCGAACAAATTGAACTTGGGTGGTTaGTATTCATCGTCTTTGATGGACAGGGGCAACATCTTCTCTGCC +
Preference number: 6 (lower is better)
Translates to: LNQPEILPNKLNLGG*YSSSLMDRGNIFSA
Trigger: GGCAGAGAAGATGTTGCCCCTGTCCATCAAAGACGATGAATACAAACCACCCAAGTTCAATTTGTTCGGCAAGATCTCGGGCTGGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS CAA 90 bp TCGGACAGTATAGACCTAAACCAGCCCGAGATCTTGCCGAACAAATaGAACTTGGGTGGTTTGTATTCATCGTCTTTGATGGACAGGGGC +
Preference number: 6 (lower is better)
Translates to: SDSIDLNQPEILPNK*NLGGLYSSSLMDRG
Trigger: GCCCCTGTCCATCAAAGACGATGAATACAAACCACCCAAGTTCAATTTGTTCGGCAAGATCTCGGGCTGGTTTAGGTCTATACTGTCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS GCA 72 bp AAGAGTCGGAAATCAAGCCTAAGCAGTTGCTCCAGATaGCGTAGAGTAGTTCCACAAAAGCGAAAGAGAGGT +
Preference number: 6 (lower is better)
Translates to: KSRKSSLSSCSR*RRVVPQKRKRG
Trigger: ACCTCTCTTTCGCTTTTGTGGAACTACTCTACGGCATCTGGAGCAACTGCTTAGGCTTGATTTCCGACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS CAA 72 bp CCCGAGATCTTGCCGAACAAATTGAACTTGGGTGGTTaGTATTCATCGTCTTTGATGGACAGGGGCAACATC +
Preference number: 6 (lower is better)
Translates to: PEILPNKLNLGG*YSSSLMDRGNI
Trigger: GATGTTGCCCCTGTCCATCAAAGACGATGAATACAAACCACCCAAGTTCAATTTGTTCGGCAAGATCTCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS CAA 90 bp AGTATAGACCTAAACCAGCCCGAGATCTTGCCGAACAAATTGAACTaGGGTGGTTTGTATTCATCGTCTTTGATGGACAGGGGCAACATC +
Preference number: 6 (lower is better)
Translates to: SIDLNQPEILPNKLN*GGLYSSSLMDRGNI
Trigger: GATGTTGCCCCTGTCCATCAAAGACGATGAATACAAACCACCCAAGTTCAATTTGTTCGGCAAGATCTCGGGCTGGTTTAGGTCTATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS GCA 72 bp AAAGTGTCCATGTCCATGAGCATGATCATGGCTATGTaGAGCACCATGTTTCACTTCATGGCTATGGCAATG +
Preference number: 6 (lower is better)
Translates to: KVSMSMSMIMAM*STMFHFMAMAM
Trigger: CATTGCCATAGCCATGAAGTGAAACATGGTGCTGCACATAGCCATGATCATGCTCATGGACATGGACACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS CAA 72 bp CTAAACCAGCCCGAGATCTTGCCGAACAAATTGAACTaGGGTGGTTTGTATTCATCGTCTTTGATGGACAGG +
Preference number: 6 (lower is better)
Translates to: LNQPEILPNKLN*GGLYSSSLMDR
Trigger: CCTGTCCATCAAAGACGATGAATACAAACCACCCAAGTTCAATTTGTTCGGCAAGATCTCGGGCTGGTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS TCA 72 bp AGTCCAGCCAAAATGGCAGTGCTATCGAAAAACATGTaGAAAGAGTCGGAAATCAAGCCTAAGCAGTTGCTC +
Preference number: 6 (lower is better)
Translates to: SPAKMAVLSKNM*KESEIKPKQLL
Trigger: GAGCAACTGCTTAGGCTTGATTTCCGACTCTTTTCACATGTTTTTCGATAGCACTGCCATTTTGGCTGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS CAA 72 bp TTGTCGGACAGTATAGACCTAAACCAGCCCGAGATCTaGCCGAACAAATTGAACTTGGGTGGTTTGTATTCA +
Preference number: 6 (lower is better)
Translates to: LSDSIDLNQPEI*PNKLNLGGLYS
Trigger: TGAATACAAACCACCCAAGTTCAATTTGTTCGGCAAGATCTCGGGCTGGTTTAGGTCTATACTGTCCGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8
CDS CCA 72 bp CAAATATTCCTATTAGGTTTACCACAAACCCAAGAATaGAAACAAGAAGCAGTCTCTCATGGTGGACATCTG +
Preference number: 6 (lower is better)
Translates to: QIFLLGLPQTQE*KQEAVSHGGHL
Trigger: CAGATGTCCACCATGAGAGACTGCTTCTTGTTTCCATTCTTGGGTTTGTGGTAAACCTAATAGGAATATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357650.9
ENST00000370112.8