RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC30A6 (Homo sapiens)

Ensembl gene IDs: ENSG00000152683

Ensembl transcript IDs: ENST00000282587.9, ENST00000357055.7, ENST00000379343.6, ENST00000406369.2, ENST00000435660.5, ENST00000449777.5, ENST00000454324.5, ENST00000457724.2

Found 384 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGTGGCAAGATTTACTAGTAAGGCTGCTGCCTATAGGCCTATGCTaGGCAAGTTCCTTATTTTCATATCCAGAAGTTAGTCAGAGCTTG +
Preference number: 1 (lower is better)
Translates to: LWQDLLVRLLPIGLC*ASSLFSYPEVSQSL
Trigger: CAAGCTCTGACTAACTTCTGGATATGAAAATAAGGAACTTGCCCAGCATAGGCCTATAGGCAGCAGCCTTACTAGTAAATCTTGCCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR GCA 90 bp ATTCTGTGGCAAGATTTACTAGTAAGGCTGCTGCCTATAGGCCTATaGTGGGCAAGTTCCTTATTTTCATATCCAGAAGTTAGTCAGAGC +
Preference number: 1 (lower is better)
Translates to: ILWQDLLVRLLPIGL*WASSLFSYPEVSQS
Trigger: GCTCTGACTAACTTCTGGATATGAAAATAAGGAACTTGCCCAGCATAGGCCTATAGGCAGCAGCCTTACTAGTAAATCTTGCCACAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR CCA 90 bp CCTCTCCCTAACTTTACAGATGAGAAAGCTCAGATGATTTGCCCATaGGTTATAAAACTACTTCCTTACACAGTGGCAGCATCAGAACTG +
Preference number: 1 (lower is better)
Translates to: PLPNFTDEKAQMICP*VIKLLPYTVAASEL
Trigger: CAGTTCTGATGCTGCCACTGTGTAAGGAAGTAGTTTTATAACCCATGGGCAAATCATCTGAGCTTTCTCATCTGTAAAGTTAGGGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR CCA 90 bp GATAGCTGGCTGATGGCTGGGAAAGTCATAAATCTCCAGGAGCATTaGATTCCAGGAAAGTTAAGTCCATTCTCAAAATCCCATTTTAAA +
Preference number: 1 (lower is better)
Translates to: DSWLMAGKVINLQEH*IPGKLSPFSKSHFK
Trigger: TTTAAAATGGGATTTTGAGAATGGACTTAACTTTCCTGGAATCCAATGCTCCTGGAGATTTATGACTTTCCCAGCCATCAGCCAGCTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR GCA 90 bp TTAATTCCTCTCCCTAACTTTACAGATGAGAAAGCTCAGATGATTTaGCCATGGGTTATAAAACTACTTCCTTACACAGTGGCAGCATCA +
Preference number: 1 (lower is better)
Translates to: LIPLPNFTDEKAQMI*PWVIKLLPYTVAAS
Trigger: TGATGCTGCCACTGTGTAAGGAAGTAGTTTTATAACCCATGGGCAAATCATCTGAGCTTTCTCATCTGTAAAGTTAGGGAGAGGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR TCA 90 bp GGAATAATTCCACACAAGCTTCGACTAAGATCTGCAACATGCTCTTaGAGCCAGCTCGTACTAGCAGCTTTAAGAAGAAAATACTTAAAT +
Preference number: 1 (lower is better)
Translates to: GIIPHKLRLRSATCS*SQLVLAALRRKYLN
Trigger: ATTTAAGTATTTTCTTCTTAAAGCTGCTAGTACGAGCTGGCTTCAAGAGCATGTTGCAGATCTTAGTCGAAGCTTGTGTGGAATTATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454324.5
3UTR CCA 90 bp TGTAATACAAAGAGCAAATGCTCCAGCAAGATCAATCAAAACAAATaGATTCATTCGGGGAAGGAAGATACTGCTAAGTCCCGGAATAAT +
Preference number: 1 (lower is better)
Translates to: CNTKSKCSSKINQNK*IHSGKEDTAKSRNN
Trigger: ATTATTCCGGGACTTAGCAGTATCTTCCTTCCCCGAATGAATCCATTTGTTTTGATTGATCTTGCTGGAGCATTTGCTCTTTGTATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
3UTR-3UTR TCA 90 bp CTTAGCTCTCCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTAGCAGGTCACATGCCTaGACAGGGGTTGCAGATGCC +
Preference number: 2 (lower is better)
Translates to: LSSPTRIIGALKEFSFIFSRSHA*TGVADA
Trigger: GGCATCTGCAACCCCTGTTCAGGCATGTGACCTGCT...AAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGGAGAGCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282587.9
3UTR-3UTR GCA 90 bp GGATTCATTCGGGGAAGGAAGATACTGCTAAGTCCCGGAATAATTCCACACAAGGAGAGCTCCCAACTGTaGCAAGACTGTGGAGGCAAA +
Preference number: 2 (lower is better)
Translates to: GFIRGRKILLSPGIIPHKESSQL*QDCGGK
Trigger: TTTGCCTCCACAGTCTTGGCACAGTTGGGAGCTCTC...CTTGTGTGGAATTATTCCGGGACTTAGCAGTATCTTCCTTCCCCGAATGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
3UTR-3UTR GCA 90 bp CTTAGCTCTCCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTGGGATGGGGAAGACATaGATGGGGTGGCAGCACATA +
Preference number: 2 (lower is better)
Translates to: LSSPTRIIGALKEFSFIFGMGKT*MGWQHI
Trigger: TATGTGCTGCCACCCCATGCATGTCTTCCCCATCCC...AAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGGAGAGCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282587.9
3UTR-3UTR TCA 90 bp CTTAGCTCTCCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTGCCTGGCCAACATGGTaGAATCCCCCGTCTTTACTA +
Preference number: 2 (lower is better)
Translates to: LSSPTRIIGALKEFSFIFAWPTW*NPPSLL
Trigger: TAGTAAAGACGGGGGATTTCACCATGTTGGCCAGGC...AAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGGAGAGCTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282587.9
3UTR-3UTR GCA 90 bp ACACTCATGGGATACATAGTGCCAAATGTCATCAAGGCAATAGCTATAGCAGAGGAGAGCTCCCAACTGTaGCAAGACTGTGGAGGCAAA +
Preference number: 2 (lower is better)
Translates to: TLMGYIVPNVIKAIAIAEESSQL*QDCGGK
Trigger: TTTGCCTCCACAGTCTTGGCACAGTTGGGAGCTCTC...CTCTGCTATAGCTATTGCCTTGATGACATTTGGCACTATGTATCCCATGAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
3UTR-3UTR TCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATAGCAGGTCACATGCCTaGACAGGGGTTGCAGATGCC +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHSRSHA*TGVADA
Trigger: GGCATCTGCAACCCCTGTTCAGGCATGTGACCTGCT...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR CAA 90 bp GCAACAGTTTTGTGTCTTAGCTCTCCTACTAGGATTATCGGCGCCTaGAAGGAATTCTCATTCATCTTTGTGTTACCTTTGGTCTGGGTC +
Preference number: 2 (lower is better)
Translates to: ATVLCLSSPTRIIGA*KEFSFIFVLPLVWV
Trigger: GACCCAGACCAAAGGTAACACAAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGGAGAGCTAAGACACAAAACTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282587.9
3UTR-3UTR TCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATGCCTGGCCAACATGGTaGAATCCCCCGTCTTTACTA +
Preference number: 2 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDAWPTW*NPPSLL
Trigger: TAGTAAAGACGGGGGATTTCACCATGTTGGCCAGGC...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
3UTR-3UTR TCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACGCCTGGCCAACATGGTaGAATCCCCCGTCTTTACTA +
Preference number: 2 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDAWPTW*NPPSLL
Trigger: TAGTAAAGACGGGGGATTTCACCATGTTGGCCAGGC...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR GCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACAGTGAGCTGAGATCATaGCACTGCATTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDSELRS*HCIPAW
Trigger: CCAGGCTGGAATGCAGTGGCATGATCTCAGCTCACT...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR GCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGGGATGGGGAAGACATaGATGGGGTGGCAGCACATA +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHGMGKT*MGWQHI
Trigger: TATGTGCTGCCACCCCATGCATGTCTTCCCCATCCC...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR TCA 90 bp GTGCCAAATGTCATCAAGGCAATAGCTATAGCAGAGGCAGTGTCTACGGCAAAACGTATCTTAGTAATGTaGCAGATCTACTCCATCAAG +
Preference number: 2 (lower is better)
Translates to: VPNVIKAIAIAEAVSTAKRILVM*QIYSIK
Trigger: CTTGATGGAGTAGATCTGTCACATTACTAAGATACG...TTTTGCCGTAGACACTGCCTCTGCTATAGCTATTGCCTTGATGACATTTGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
3UTR-3UTR TCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGCCTGGCCAACATGGTaGAATCCCCCGTCTTTACTA +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHAWPTW*NPPSLL
Trigger: TAGTAAAGACGGGGGATTTCACCATGTTGGCCAGGC...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR GCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATAGTGAGCTGAGATCATaGCACTGCATTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHSELRS*HCIPAW
Trigger: CCAGGCTGGAATGCAGTGGCATGATCTCAGCTCACT...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR GCA 90 bp CTTAGCTCTCCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTCTGCCTATAGGCCTATaGTGGGCAAGTTCCTTATTT +
Preference number: 2 (lower is better)
Translates to: LSSPTRIIGALKEFSFIFLPIGL*WASSLF
Trigger: AAATAAGGAACTTGCCCAGCATAGGCCTATAGGCAG...AAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGGAGAGCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
3UTR-3UTR CCA 90 bp CTTAGCTCTCCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTGTATTAAAGCACCTTTaGTGGGACAGATGCACAGGT +
Preference number: 2 (lower is better)
Translates to: LSSPTRIIGALKEFSFIFVLKHL*WDRCTG
Trigger: ACCTGTGCATCTGTCCCACCAAAGGTGCTTTAATAC...AAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGGAGAGCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
3UTR-3UTR CCA 90 bp CTTAGCTCTCCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTGTGTTACCTTTGGTCTaGGTCACACCAACTGGTATA +
Preference number: 2 (lower is better)
Translates to: LSSPTRIIGALKEFSFIFVLPLV*VTPTGI
Trigger: TATACCAGTTGGTGTGACCCAGACCAAAGGTAACAC...AAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGGAGAGCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
3UTR-3UTR CCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATACTGTGCCAAGACTGTaGAGGCAAATACAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDTVPRL*RQIQPG
Trigger: TCCTGGCTGTATTTGCCTCCACAGTCTTGGCACAGT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
3UTR-3UTR CCA 90 bp AGCAAAAGGTTTATTCCGAATAGAAAGCATCGTGAACAGGTTGAAACAAAGAGCACTGTGCCAAGACTGTaGAGGCAAATACAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: SKRFIPNRKHREQVETKSTVPRL*RQIQPG
Trigger: TCCTGGCTGTATTTGCCTCCACAGTCTTGGCACAGT...GCTCTTTGTTTCAACCTGTTCACGATGCTTTCTATTCGGAATAAACCTTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
3UTR-3UTR TCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGGCAGGAGAATCATTTaGACTCAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHGRRII*TQEAEV
Trigger: AACCTCTGCCTCCTGAGTTCAAATGATTCTCCTGCC...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR GCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATCTTTGGTGGGACAGATaGACAGGTGTTGCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHLWWDR*TGVASE
Trigger: TTCAGAGGCAACACCTGTGCATCTGTCCCACCAAAG...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CCA 90 bp CCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTGTGTTACCTCACTTTAAAATCCTATaGGGATGGGGAAGACATGCA +
Preference number: 2 (lower is better)
Translates to: PTRIIGALKEFSFIFVLPHFKIL*GWGRHA
Trigger: TGCATGTCTTCCCCATCCCCATAGGATTTTAAAGTG...AGGTAACACAAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282587.9
3UTR-3UTR TCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACCTCCTAGGTCATGTGTaGCTGCTGCTTGTTATACTT +
Preference number: 2 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDLLGHV*LLLVIL
Trigger: AAGTATAACAAGCAGCAGTCACACATGACCTAGGAG...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR TCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATCACAGGTGTTGCCTCTaGATTGGTGTTGAGGAAGTA +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHHRCCL*IGVEEV
Trigger: TACTTCCTCAACACCAATTCAGAGGCAACACCTGTG...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR GCA 90 bp CTTAGCTCTCCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTGTCCTCTCCAGTACCTaGTACATTATATGTAATTCC +
Preference number: 2 (lower is better)
Translates to: LSSPTRIIGALKEFSFIFVLSST*YIICNS
Trigger: GGAATTACATATAATGTAGCAGGTACTGGAGAGGAC...AAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGGAGAGCTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
3UTR-3UTR CCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATTCTTCTCTAGATAGCTaGCTGATGGCTGGGAAAGTC +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHSSLDS*LMAGKV
Trigger: GACTTTCCCAGCCATCAGCCAGCTATCTAGAGAAGA...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGTCTTCTCTAGATAGCTaGCTGATGGCTGGGAAAGTC +
Preference number: 2 (lower is better)
Translates to: HDPNSYLVEINGGRRIILSSLDS*LMAGKV
Trigger: GACTTTCCCAGCCATCAGCCAGCTATCTAGAGAAGA...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACTTAAAGCACCTTTGGTaGGACAGATGCACAGGTGTT +
Preference number: 2 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDLKHLW*DRCTGV
Trigger: AACACCTGTGCATCTGTCCCACCAAAGGTGCTTTAA...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACGTATTAAAGCACCTTTaGTGGGACAGATGCACAGGT +
Preference number: 2 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDVLKHL*WDRCTG
Trigger: ACCTGTGCATCTGTCCCACCAAAGGTGCTTTAATAC...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CCA 90 bp CCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTGTGTTACCTCTGGGTCACACCAACTaGTATACTGAATGCATATTA +
Preference number: 2 (lower is better)
Translates to: PTRIIGALKEFSFIFVLPLGHTN*YTECIL
Trigger: TAATATGCATTCAGTATACCAGTTGGTGTGACCCAG...AGGTAACACAAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
3UTR CAA 90 bp CGGAATAATTCCACACAAGCTTCGACTAAGATCTGCAACATGCTCTaGAAGCCAGCTCGTACTAGCAGCTTTAAGAAGAAAATACTTAAA +
Preference number: 2 (lower is better)
Translates to: RNNSTQASTKICNML*KPARTSSFKKKILK
Trigger: TTTAAGTATTTTCTTCTTAAAGCTGCTAGTACGAGCTGGCTTCAAGAGCATGTTGCAGATCTTAGTCGAAGCTTGTGTGGAATTATTCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454324.5
3UTR-3UTR TCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATCTCCTAGGTCATGTGTaGCTGCTGCTTGTTATACTT +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHLLGHV*LLLVIL
Trigger: AAGTATAACAAGCAGCAGTCACACATGACCTAGGAG...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR TCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGATGACAATTCTGCTTaGCAGAGATGGCTTCTTGGA +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHDDNSA*QRWLLG
Trigger: TCCAAGAAGCCATCTCTGTCAAGCAGAATTGTCATC...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR TCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACCTGTCTAGCTTCAAGTaGTTCTGTGGCAAGATTTAC +
Preference number: 2 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDLSSFK*FCGKIY
Trigger: GTAAATCTTGCCACAGAATCACTTGAAGCTAGACAG...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATAATGGTGTTAGGCTGTaGTTCACCTATTCTCATGGC +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHNGVRL*FTYSHG
Trigger: GCCATGAGAATAGGTGAACCACAGCCTAACACCATT...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR TCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACCGTATCTTAGTAATGTaGCAGATCTACTCCATCAAG +
Preference number: 2 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDRILVM*QIYSIK
Trigger: CTTGATGGAGTAGATCTGTCACATTACTAAGATACG...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR TCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATCGTATCTTAGTAATGTaGCAGATCTACTCCATCAAG +
Preference number: 2 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDRILVM*QIYSIK
Trigger: CTTGATGGAGTAGATCTGTCACATTACTAAGATACG...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
3UTR-3UTR TCA 90 bp TGTCATCAAGGCAATAGCTATAGCAGAGGCAGTGTCTACGGCAAAATAATTATTTTCCACACAAGCTTCTaGGACATAAGCAAAAGGTTT +
Preference number: 2 (lower is better)
Translates to: CHQGNSYSRGSVYGKIIIFHTSF*DISKRF
Trigger: AAACCTTTTGCTTATGTCTCAGAAGCTTGTGTGGAA...AATAATTATTTTGCCGTAGACACTGCCTCTGCTATAGCTATTGCCTTGATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449777.5
3UTR-3UTR GCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATAAGGTCACATCACACTaGAGTCAACTACAAAACCAA +
Preference number: 2 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDKVTSH*SQLQNQ
Trigger: TTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
3UTR-3UTR GCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACAAGGTCACATCACACTaGAGTCAACTACAAAACCAA +
Preference number: 2 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDKVTSH*SQLQNQ
Trigger: TTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTT...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR GCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACGGCCAAGGAACAGGTTaGCTTATTACATTTTACGAA +
Preference number: 2 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDGQGTG*LITFYE
Trigger: TTCGTAAAATGTAATAAGGCAACCTGTTCCTTGGCC...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR GCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGGAATTCAGATCTCTTaGCTCCTAGGCAGTGTTTTT +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHGIQIS*LLGSVF
Trigger: AAAAACACTGCCTAGGAGGCAAGAGATCTGAATTCC...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CCA 90 bp CCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTGTGTTACCTAAGGTATTTAGGACATaGTCACTTATTACCACAGAT +
Preference number: 2 (lower is better)
Translates to: PTRIIGALKEFSFIFVLPKVFRT*SLITTD
Trigger: ATCTGTGGTAATAAGTGACCATGTCCTAAATACCTT...AGGTAACACAAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
3UTR-3UTR CCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATCTATATAATAATGCCTaGCCCAATGTCCCCTGTAAC +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHLYNNA*PNVPCN
Trigger: GTTACAGGGGACATTGGGCCAGGCATTATTATATAG...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACGTTCACCTATTCTCATaGCACCTCAAATTAATGGCT +
Preference number: 2 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDVHLFS*HLKLMA
Trigger: AGCCATTAATTTGAGGTGCCATGAGAATAGGTGAAC...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR TCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGCGTATCTTAGTAATGTaGCAGATCTACTCCATCAAG +
Preference number: 2 (lower is better)
Translates to: HDPNSYLVEINGGRRIILRILVM*QIYSIK
Trigger: CTTGATGGAGTAGATCTGTCACATTACTAAGATACG...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR TCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACCCTATTATAATATGGTaGCTTCGTAAAGCAGGGTTA +
Preference number: 2 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDPIIIW*LRKAGL
Trigger: TAACCCTGCTTTACGAAGTCACCATATTATAATAGG...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR GCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATAAGGTCACATCACACTaGAGTCAACTACAAAACCAA +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHKVTSH*SQLQNQ
Trigger: TTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTT...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR GCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATTTGGGATTCTTTCACTaGATATCACCAAAAGTTGGG +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHLGFFH*ISPKVG
Trigger: CCCAACTTTTGGTGATATGCAGTGAAAGAATCCCAA...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR GCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGTTGGGATTCTTTCACTaGATATCACCAAAAGTTGGG +
Preference number: 2 (lower is better)
Translates to: HDPNSYLVEINGGRRIILLGFFH*ISPKVG
Trigger: CCCAACTTTTGGTGATATGCAGTGAAAGAATCCCAA...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR GCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGGCCAAGGAACAGGTTaGCTTATTACATTTTACGAA +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHGQGTG*LITFYE
Trigger: TTCGTAAAATGTAATAAGGCAACCTGTTCCTTGGCC...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATAATCTCCAGGAGCATTaGATTCCAGGAAAGTTAAGT +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHNLQEH*IPGKLS
Trigger: ACTTAACTTTCCTGGAATCCAATGCTCCTGGAGATT...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACCTTCAAGTGATTCTGTaGCAAGATTTACTAGTAAGG +
Preference number: 2 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDLQVIL*QDLLVR
Trigger: CCTTACTAGTAAATCTTGCCACAGAATCACTTGAAG...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACCAGATGATTTGCCCATaGGTTATAAAACTACTTCCT +
Preference number: 2 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDQMICP*VIKLLP
Trigger: AGGAAGTAGTTTTATAACCCATGGGCAAATCATCTG...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR TCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATCCTATTATAATATGGTaGCTTCGTAAAGCAGGGTTA +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHPIIIW*LRKAGL
Trigger: TAACCCTGCTTTACGAAGTCACCATATTATAATAGG...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR GCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACAAAAGGATTTCAAAGTaGTGCTCCTATTTGAAAGTG +
Preference number: 2 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDKRISK*CSYLKV
Trigger: CACTTTCAAATAGGAGCAGCACTTTGAAATCCTTTT...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR GCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACAAAGCTCAGATGATTTaGCCATGGGTTATAAAACTA +
Preference number: 2 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDKAQMI*PWVIKL
Trigger: TAGTTTTATAACCCATGGGCAAATCATCTGAGCTTT...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACACACAGAACTGTGTTTaGTACCTGAACACTTTAAAA +
Preference number: 2 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDTQNCV*YLNTLK
Trigger: TTTTAAAGTGTTCAGGTACCAAACACAGTTCTGTGT...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATCTTCAAGTGATTCTGTaGCAAGATTTACTAGTAAGG +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHLQVIL*QDLLVR
Trigger: CCTTACTAGTAAATCTTGCCACAGAATCACTTGAAG...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR GCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGAGGATTTCAAAGTGCTaGTCCTATTTGAAAGTGAAT +
Preference number: 2 (lower is better)
Translates to: HDPNSYLVEINGGRRIILRISKC*SYLKVN
Trigger: ATTCACTTTCAAATAGGAGCAGCACTTTGAAATCCT...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR GCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATAGGATTTCAAAGTGCTaGTCCTATTTGAAAGTGAAT +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHRISKC*SYLKVN
Trigger: ATTCACTTTCAAATAGGAGCAGCACTTTGAAATCCT...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR GCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGCAGTTCAGATTTCATaGATGACCCTAATTCATATT +
Preference number: 2 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHAVQIS*MTLIHI
Trigger: AATATGAATTAGGGTCATGCATGAAATCTGAACTGC...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CAA 90 bp GATCTGAAAAGTTTAGGACATTGGCTGCAACAGGCCCAGACAATAAGGCAGGCCAGGCAGGAGAATCATTaGAACTCAGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: DLKSLGHWLQQAQTIRQARQENH*NSGGRG
Trigger: ACCTCTGCCTCCTGAGTTCAAATGATTCTCCTGCCT...GGCCTGCCTTATTGTCTGGGCCTGTTGCAGCCAATGTCCTAAACTTTTCAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
3UTR TCA 72 bp GGGACAGATGCACAGGTGTTGCCTCTGAATTGGTGTTaGGGAAGTAGGCATAAAACCTCACACAGAACTGTG +
Preference number: 3 (lower is better)
Translates to: GTDAQVLPLNWC*GSRHKTSHRTV
Trigger: CACAGTTCTGTGTGAGGTTTTATGCCTACTTCCTCAACACCAATTCAGAGGCAACACCTGTGCATCTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR GCA 72 bp TCCCGGAATAATTCCACACAAGCTTCGACTAAGATCTaGAACATGCTCTTGAAGCCAGCTCGTACTAGCAGC +
Preference number: 3 (lower is better)
Translates to: SRNNSTQASTKI*NMLLKPARTSS
Trigger: GCTGCTAGTACGAGCTGGCTTCAAGAGCATGTTGCAGATCTTAGTCGAAGCTTGTGTGGAATTATTCCGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454324.5
3UTR-3UTR CAA 90 bp CTTAGCTCTCCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTAGGCAGGAGAATCATTaGAACTCAGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: LSSPTRIIGALKEFSFIFRQENH*NSGGRG
Trigger: ACCTCTGCCTCCTGAGTTCAAATGATTCTCCTGCCT...AAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGGAGAGCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
3UTR-3UTR CAA 90 bp AAGCATGCTGCTGTAAGGTGTGTGTCCATGATTGAGACCAAAACCATAAGGCCTAGCATCGTGAACAGGTaGAAACAAAGAGCCACAAAA +
Preference number: 3 (lower is better)
Translates to: KHAAVRCVSMIETKTIRPSIVNR*KQRATK
Trigger: TTTTGTGGCTCTTTGTTTCAACCTGTTCACGATGCT...AGGCCTTATGGTTTTGGTCTCAATCATGGACACACACCTTACAGCAGCATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
3UTR TCA 72 bp CCACACAAGCTTCGACTAAGATCTGCAACATGCTCTTaGAGCCAGCTCGTACTAGCAGCTTTAAGAAGAAAA +
Preference number: 3 (lower is better)
Translates to: PHKLRLRSATCS*SQLVLAALRRK
Trigger: TTTTCTTCTTAAAGCTGCTAGTACGAGCTGGCTTCAAGAGCATGTTGCAGATCTTAGTCGAAGCTTGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454324.5
3UTR-3UTR CAA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATAGGCAGGAGAATCATTaGAACTCAGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDRQENH*NSGGRG
Trigger: ACCTCTGCCTCCTGAGTTCAAATGATTCTCCTGCCT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
3UTR-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACAGGCAGGAGAATCATTaGAACTCAGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDRQENH*NSGGRG
Trigger: ACCTCTGCCTCCTGAGTTCAAATGATTCTCCTGCCT...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CAA 90 bp CCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTGTGTTACCTCCTCAAATTAATGGCTaGGGTGTTGGTGTAGGTAAC +
Preference number: 3 (lower is better)
Translates to: PTRIIGALKEFSFIFVLPPQING*GVGVGN
Trigger: GTTACCTACACCAACACCCAAGCCATTAATTTGAGG...AGGTAACACAAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
3UTR-3UTR CAA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATACCAGTCCTCAATCCTaGAGTTGCTCCAATTCCTGG +
Preference number: 3 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDTSPQS*SCSNSW
Trigger: CCAGGAATTGGAGCAACTCAAGGATTGAGGACTGGT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
3UTR-3UTR CAA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGATGCCTGAACAGGGGTaGCAGATGCCAAAGACAATG +
Preference number: 3 (lower is better)
Translates to: HDPNSYLVEINGGRRIILMPEQG*QMPKTM
Trigger: CATTGTCTTTGGCATCTGCAACCCCTGTTCAGGCAT...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CAA 90 bp CTTAGCTCTCCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTCACACAGAACTGTGTTaGGTACCTGAACACTTTAAA +
Preference number: 3 (lower is better)
Translates to: LSSPTRIIGALKEFSFIFHTELC*VPEHFK
Trigger: TTTAAAGTGTTCAGGTACCAAACACAGTTCTGTGTG...AAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGGAGAGCTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
3UTR-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACTGGAATTCAGATCTCTaGCCTCCTAGGCAGTGTTTT +
Preference number: 3 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDWNSDL*PPRQCF
Trigger: AAAACACTGCCTAGGAGGCAAGAGATCTGAATTCCA...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACCCTCAAATTAATGGCTaGGGTGTTGGTGTAGGTAAC +
Preference number: 3 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDPQING*GVGVGN
Trigger: GTTACCTACACCAACACCCAAGCCATTAATTTGAGG...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CAA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATATGAGCAAGAACCATTaGTTCATTGGCATCTCGTCG +
Preference number: 3 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDMSKNH*FIGISS
Trigger: CGACGAGATGCCAATGAACAAATGGTTCTTGCTCAT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
3UTR-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACGACAGAGATGGCTTCTaGGATGTTTTTAATCCACAG +
Preference number: 3 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDDRDGF*DVFNPQ
Trigger: CTGTGGATTAAAAACATCCAAGAAGCCATCTCTGTC...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACAGGCCAAGGAACAGGTaGCCTTATTACATTTTACGA +
Preference number: 3 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDRPRNR*PYYILR
Trigger: TCGTAAAATGTAATAAGGCAACCTGTTCCTTGGCCT...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CAA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATTGGAATTCAGATCTCTaGCCTCCTAGGCAGTGTTTT +
Preference number: 3 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHWNSDL*PPRQCF
Trigger: AAAACACTGCCTAGGAGGCAAGAGATCTGAATTCCA...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CAA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACAGAGATGGCTTCTaGGATGTTTTTAATCCACAG +
Preference number: 3 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHDRDGF*DVFNPQ
Trigger: CTGTGGATTAAAAACATCCAAGAAGCCATCTCTGTC...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CAA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGGACAGAGATGGCTTCTaGGATGTTTTTAATCCACAG +
Preference number: 3 (lower is better)
Translates to: HDPNSYLVEINGGRRIILDRDGF*DVFNPQ
Trigger: CTGTGGATTAAAAACATCCAAGAAGCCATCTCTGTC...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CAA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATAGGCCAAGGAACAGGTaGCCTTATTACATTTTACGA +
Preference number: 3 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHRPRNR*PYYILR
Trigger: TCGTAAAATGTAATAAGGCAACCTGTTCCTTGGCCT...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CAA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGAGGCCAAGGAACAGGTaGCCTTATTACATTTTACGA +
Preference number: 3 (lower is better)
Translates to: HDPNSYLVEINGGRRIILRPRNR*PYYILR
Trigger: TCGTAAAATGTAATAAGGCAACCTGTTCCTTGGCCT...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACCACACAGAACTGTGTTaGGTACCTGAACACTTTAAA +
Preference number: 3 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDHTELC*VPEHFK
Trigger: TTTAAAGTGTTCAGGTACCAAACACAGTTCTGTGTG...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR GCA 72 bp TCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTaGAGTCAACTACAAAACCAAAGATACCAAAATCCA +
Preference number: 3 (lower is better)
Translates to: SSGSYKGKVTSH*SQLQNQRYQNP
Trigger: TGGATTTTGGTATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
3UTR-3UTR CAA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATAAGTGCTGCTCCTATTaGAAAGTGAATGAGTTGACT +
Preference number: 3 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHKCCSY*KVNELT
Trigger: AGTCAACTCATTCACTTTCAAATAGGAGCAGCACTT...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CAA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATCACACAGAACTGTGTTaGGTACCTGAACACTTTAAA +
Preference number: 3 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHHTELC*VPEHFK
Trigger: TTTAAAGTGTTCAGGTACCAAACACAGTTCTGTGTG...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR-3UTR CAA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGAAAGCTCAGATGATTaGCCCATGGGTTATAAAACT +
Preference number: 3 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHESSDD*PMGYKT
Trigger: AGTTTTATAACCCATGGGCAAATCATCTGAGCTTTC...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR GCA 72 bp AATCAGAAGCTTGAAATTCAGGTCCTCTCCAGTACCTaGTACATTATATGTAATTCCAAACATGACTTCAGA +
Preference number: 3 (lower is better)
Translates to: NQKLEIQVLSST*YIICNSKHDFR
Trigger: TCTGAAGTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAGCTTCTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GGATTCATTCGGGGAAGGAAGATACTGCTAAGTCCCGGAATAATTCCACACAAGCCCATGATAAGGAGCTaGACAGCTCCCGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: GFIRGRKILLSPGIIPHKPMIRS*TAPAGS
Trigger: GCTTCCGGCGGGAGCTGTGCAGCTCCTTATCATGGG...CTTGTGTGGAATTATTCCGGGACTTAGCAGTATCTTCCTTCCCCGAATGAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR GCA 90 bp TTTAATATAAAGAGAGCTCCCAACTGTGCCAAGACTGTGGAGGCAAATACAGCCCCCATGATAAGGAGCTaGACAGCTCCCGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: FNIKRAPNCAKTVEANTAPMIRS*TAPAGS
Trigger: GCTTCCGGCGGGAGCTGTGCAGCTCCTTATCATGGG...GGCTGTATTTGCCTCCACAGTCTTGGCACAGTTGGGAGCTCTCTTTATATTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CCA 90 bp AAAGAGAGCTCCCAACTGTGCCAAGACTGTGGAGGCAAATACAGCCAGGACTTCTGGGGTGGTGTTGTCTaGAGTAAGACTTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: KESSQLCQDCGGKYSQDFWGGVV*SKTFPL
Trigger: CAGTGGGAAAGTCTTACTCCAGACAACACCACCCCA...GAAGTCCTGGCTGTATTTGCCTCCACAGTCTTGGCACAGTTGGGAGCTCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR GCA 90 bp CTTAGCTCTCCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTCCCATGATAAGGAGCTaGACAGCTCCCGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: LSSPTRIIGALKEFSFIFPMIRS*TAPAGS
Trigger: GCTTCCGGCGGGAGCTGTGCAGCTCCTTATCATGGG...AAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGGAGAGCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR GCA 90 bp CCCAACTGTGCCAAGACTGTGGAGGCAAATACAGCCAGGACTTCTAATCTTTCAGAGAGCTCCCAACTGTaGCAAGACTGTGGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: PNCAKTVEANTARTSNLSESSQL*QDCGGK
Trigger: TTTGCCTCCACAGTCTTGGCACAGTTGGGAGCTCTC...TGAAAGATTAGAAGTCCTGGCTGTATTTGCCTCCACAGTCTTGGCACAGTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454324.5
ENST00000457724.2
CDS-3UTR TCA 90 bp AAAGAGAGCTCCCAACTGTGCCAAGACTGTGGAGGCAAATACAGCCAGGACTTCCCCAGGAGTGTTAAATaGAAATTCTGGAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: KESSQLCQDCGGKYSQDFPRSVK*KFWRWT
Trigger: AGTCCACCTCCAGAATTTTCATTTAACACTCCTGGG...GAAGTCCTGGCTGTATTTGCCTCCACAGTCTTGGCACAGTTGGGAGCTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR GCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGACCCATGATAAGGAGCTaGACAGCTCCCGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRPMIRS*TAPAGS
Trigger: GCTTCCGGCGGGAGCTGTGCAGCTCCTTATCATGGG...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282587.9
ENST00000379343.6
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR GCA 90 bp GTGCCAAATGTCATCAAGGCAATAGCTATAGCAGAGGCAGTGTCTACGGCAAAAGAGAGCTCCCAACTGTaGCAAGACTGTGGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: VPNVIKAIAIAEAVSTAKESSQL*QDCGGK
Trigger: TTTGCCTCCACAGTCTTGGCACAGTTGGGAGCTCTC...TTTTGCCGTAGACACTGCCTCTGCTATAGCTATTGCCTTGATGACATTTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR GCA 90 bp ACATGGGGTGGTGTTGTCTGGAGTAAGACTTTCCCACTGTACACACTCATGGGACCTCAATCCTTGAGTTaGTCCAATTCCTGGAACTCC +
Preference number: 4 (lower is better)
Translates to: TWGGVVWSKTFPLYTLMGPQSLS*SNSWNS
Trigger: GGAGTTCCAGGAATTGGAGCAACTCAAGGATTGAGG...TCCCATGAGTGTGTACAGTGGGAAAGTCTTACTCCAGACAACACCACCCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR GCA 90 bp ACATGGGGTGGTGTTGTCTGGAGTAAGACTTTCCCACTGTACACACTCATGGGAAACCCTTCGGTCAGCTaGTACAAGTCTAAATTCCCG +
Preference number: 4 (lower is better)
Translates to: TWGGVVWSKTFPLYTLMGNPSVS*YKSKFP
Trigger: CGGGAATTTAGACTTGTAGCAGCTGACCGAAGGGTT...TCCCATGAGTGTGTACAGTGGGAAAGTCTTACTCCAGACAACACCACCCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449777.5
CDS-3UTR CCA 90 bp CCCAACTGTGCCAAGACTGTGGAGGCAAATACAGCCAGGACTTCTAATCTTTCATGGGGTGGTGTTGTCTaGAGTAAGACTTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: PNCAKTVEANTARTSNLSWGGVV*SKTFPL
Trigger: CAGTGGGAAAGTCTTACTCCAGACAACACCACCCCA...TGAAAGATTAGAAGTCCTGGCTGTATTTGCCTCCACAGTCTTGGCACAGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454324.5
CDS-3UTR TCA 90 bp CATTCGGGGAAGGAAGATACTGCTAAGTCCCGGAATAATTCCACACAAGCTTCTGGCAGGAGAATCATTTaGACTCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: HSGKEDTAKSRNNSTQASGRRII*TQEAEV
Trigger: AACCTCTGCCTCCTGAGTTCAAATGATTCTCCTGCC...AGAAGCTTGTGTGGAATTATTCCGGGACTTAGCAGTATCTTCCTTCCCCGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449777.5
CDS-3UTR TCA 90 bp GGATTCATTCGGGGAAGGAAGATACTGCTAAGTCCCGGAATAATTCCACACAAGGGCAGGAGAATCATTTaGACTCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GFIRGRKILLSPGIIPHKGRRII*TQEAEV
Trigger: AACCTCTGCCTCCTGAGTTCAAATGATTCTCCTGCC...CTTGTGTGGAATTATTCCGGGACTTAGCAGTATCTTCCTTCCCCGAATGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAAGCAGGTCACATGCCTaGACAGGGGTTGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRSRSHA*TGVADA
Trigger: GGCATCTGCAACCCCTGTTCAGGCATGTGACCTGCT...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATCCCATGATAAGGAGCTaGACAGCTCCCGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDPMIRS*TAPAGS
Trigger: GCTTCCGGCGGGAGCTGTGCAGCTCCTTATCATGGG...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282587.9
ENST00000379343.6
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR GCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTGGGATGGGGAAGACATaGATGGGGTGGCAGCACATA +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSGMGKT*MGWQHI
Trigger: TATGTGCTGCCACCCCATGCATGTCTTCCCCATCCC...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GATCTGAAAAGTTTAGGACATTGGCTGCAACAGGCCCAGACAATAAGGCAGGCCAAAAGTTTAGGACATTaGCTGCAACAGGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: DLKSLGHWLQQAQTIRQAKSLGH*LQQAQT
Trigger: TGTCTGGGCCTGTTGCAGCCAATGTCCTAAACTTTT...GGCCTGCCTTATTGTCTGGGCCTGTTGCAGCCAATGTCCTAAACTTTTCAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CCA 90 bp CCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTGTGTTACCTTGGGGAAGACATGCATaGGGTGGCAGCACATACCTC +
Preference number: 4 (lower is better)
Translates to: PTRIIGALKEFSFIFVLPWGRHA*GGSTYL
Trigger: GAGGTATGTGCTGCCACCCCATGCATGTCTTCCCCA...AGGTAACACAAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR CCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATCGCCGGAAGCCGTTCTaGGTGCTCGAGTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDRRKPF*VLEFSQ
Trigger: CTGGGAAAACTCGAGCACCCAGAACGGCTTCCGGCG...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357055.7
ENST00000435660.5
CDS-3UTR CCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTTTTGGTAGGCCGAGGTaGGTGGACCACTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSFGRPR*VDHLRS
Trigger: TGACCTCAAGTGGTCCACCCACCTCGGCCTACCAAA...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379343.6
CDS-3UTR TCA 90 bp ACATGGGGTGGTGTTGTCTGGAGTAAGACTTTCCCACTGTACACACTCATGGGAGGTTTTCGAAAGAGATaGATTGTCCCCATGATAAGG +
Preference number: 4 (lower is better)
Translates to: TWGGVVWSKTFPLYTLMGGFRKR*IVPMIR
Trigger: CCTTATCATGGGGACAATTCATCTCTTTCGAAAACC...TCCCATGAGTGTGTACAGTGGGAAAGTCTTACTCCAGACAACACCACCCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp CCCAACTGTGCCAAGACTGTGGAGGCAAATACAGCCAGGACTTCTAATCTTTCAATGAGTTTGTCCAACTaGCCAATAACATGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PNCAKTVEANTARTSNLSMSLSN*PITWGG
Trigger: ACCACCCCATGTTATTGGTCAGTTGGACAAACTCAT...TGAAAGATTAGAAGTCCTGGCTGTATTTGCCTCCACAGTCTTGGCACAGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454324.5
CDS-3UTR TCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTGCCTGGCCAACATGGTaGAATCCCCCGTCTTTACTA +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSAWPTW*NPPSLL
Trigger: TAGTAAAGACGGGGGATTTCACCATGTTGGCCAGGC...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACAGCAGGTCACATGCCTaGACAGGGGTTGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDSRSHA*TGVADA
Trigger: GGCATCTGCAACCCCTGTTCAGGCATGTGACCTGCT...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATGGTGGGTGGACCACTTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDGGWTT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAAGTGGTCCACCCACC...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379343.6
CDS-3UTR GCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTGAGAGCTCCCAACTGTaGCAAGACTGTGGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSESSQL*QDCGGK
Trigger: TTTGCCTCCACAGTCTTGGCACAGTTGGGAGCTCTC...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR GCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAGGGATGGGGAAGACATaGATGGGGTGGCAGCACATA +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRGMGKT*MGWQHI
Trigger: TATGTGCTGCCACCCCATGCATGTCTTCCCCATCCC...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGCGCCGGAAGCCGTTCTaGGTGCTCGAGTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILRRKPF*VLEFSQ
Trigger: CTGGGAAAACTCGAGCACCCAGAACGGCTTCCGGCG...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357055.7
ENST00000435660.5
3UTR CAA 72 bp GGTTCACCTATTCTCATGGCACCTCAAATTAATGGCTaGGGTGTTGGTGTAGGTAACGCTTGGCCTGTATGT +
Preference number: 4 (lower is better)
Translates to: GSPILMAPQING*GVGVGNAWPVC
Trigger: ACATACAGGCCAAGCGTTACCTACACCAACACCCAAGCCATTAATTTGAGGTGCCATGAGAATAGGTGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp CTCCCAACTGTGCCAAGACTGTGGAGGCAAATACAGCCAGGACTTCTAATCTTTGGTTTTCGAAAGAGATaGATTGTCCCCATGATAAGG +
Preference number: 4 (lower is better)
Translates to: LPTVPRLWRQIQPGLLIFGFRKR*IVPMIR
Trigger: CCTTATCATGGGGACAATTCATCTCTTTCGAAAACC...AAAGATTAGAAGTCCTGGCTGTATTTGCCTCCACAGTCTTGGCACAGTTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454324.5
ENST00000457724.2
CDS-3UTR TCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTTCTGCAACATGCTCTTaGAGCCAGCTCGTACTAGCA +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSSATCS*SQLVLA
Trigger: TGCTAGTACGAGCTGGCTTCAAGAGCATGTTGCAGA...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000454324.5
CDS-3UTR TCA 90 bp ATTCGGGGAAGGAAGATACTGCTAAGTCCCGGAATAATTCCACACAAGCTTCTGATGAGTTTGTCCAACTaGCCAATAACATGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: IRGRKILLSPGIIPHKLLMSLSN*PITWGG
Trigger: ACCACCCCATGTTATTGGTCAGTTGGACAAACTCAT...CAGAAGCTTGTGTGGAATTATTCCGGGACTTAGCAGTATCTTCCTTCCCCGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449777.5
CDS-3UTR TCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTGGCAGGAGAATCATTTaGACTCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSGRRII*TQEAEV
Trigger: AACCTCTGCCTCCTGAGTTCAAATGATTCTCCTGCC...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp TTTAATATAAAGAGAGCTCCCAACTGTGCCAAGACTGTGGAGGCAAATACAGCCAGTGGTCTGAGAGACTaGACAGGACATGCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: FNIKRAPNCAKTVEANTASGLRD*TGHAEK
Trigger: TTTCTCTGCATGTCCTGTTCAGTCTCTCAGACCACT...GGCTGTATTTGCCTCCACAGTCTTGGCACAGTTGGGAGCTCTCTTTATATTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457724.2
CDS-3UTR TCA 90 bp GTGCCAAGACTGTGGAGGCAAATACAGCCAGGACTTCTAATCTTTCAAACCATATGGAGAAAAGTGGTCTaGGAGACTGAACAGGACATG +
Preference number: 4 (lower is better)
Translates to: VPRLWRQIQPGLLIFQTIWRKVV*ETEQDM
Trigger: CATGTCCTGTTCAGTCTCTCAGACCACTTTTCTCCA...TATGGTTTGAAAGATTAGAAGTCCTGGCTGTATTTGCCTCCACAGTCTTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457724.2
CDS-3UTR GCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTGGACCTTCGGTCAGCTaGTACAAGTCTAAATTCCCG +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSGPSVS*YKSKFP
Trigger: CGGGAATTTAGACTTGTAGCAGCTGACCGAAGGTCC...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000379343.6
ENST00000435660.5
ENST00000454324.5
CDS-3UTR GCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAGAGAGCTCCCAACTGTaGCAAGACTGTGGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRESSQL*QDCGGK
Trigger: TTTGCCTCCACAGTCTTGGCACAGTTGGGAGCTCTC...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR GCA 90 bp GTGCCAAATGTCATCAAGGCAATAGCTATAGCAGAGGCAGTGTCTACGGCAAAAGCTTCGACTAAGATCTaGAACATGCTCTTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: VPNVIKAIAIAEAVSTAKASTKI*NMLLKP
Trigger: TGGCTTCAAGAGCATGTTGCAGATCTTAGTCGAAGC...TTTTGCCGTAGACACTGCCTCTGCTATAGCTATTGCCTTGATGACATTTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454324.5
CDS-3UTR GCA 90 bp CTTCCCGTGTGTATCTCGGGCTGTTCCAAAAAGCGTTCTGCACTTTCTTTTAATCCTCAATCCTTGAGTTaGTCCAATTCCTGGAACTCC +
Preference number: 4 (lower is better)
Translates to: LPVCISGCSKKRSALSFNPQSLS*SNSWNS
Trigger: GGAGTTCCAGGAATTGGAGCAACTCAAGGATTGAGG...ATTAAAAGAAAGTGCAGAACGCTTTTTGGAACAGCCCGAGATACACACGGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR GCA 90 bp GATCTGAAAAGTTTAGGACATTGGCTGCAACAGGCCCAGACAATAAGGCAGGCCAAGGTCACATCACACTaGAGTCAACTACAAAACCAA +
Preference number: 4 (lower is better)
Translates to: DLKSLGHWLQQAQTIRQAKVTSH*SQLQNQ
Trigger: TTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTT...GGCCTGCCTTATTGTCTGGGCCTGTTGCAGCCAATGTCCTAAACTTTTCAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR GCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGGACATGATAAGGAGCTaGACAGCTCCCGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILDMIRS*TAPAGS
Trigger: GCTTCCGGCGGGAGCTGTGCAGCTCCTTATCATGTC...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357055.7
CDS-3UTR GCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATAACATGATAAGGAGCTaGACAGCTCCCGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDNMIRS*TAPAGS
Trigger: GCTTCCGGCGGGAGCTGTGCAGCTCCTTATCATGTT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406369.2
CDS-3UTR CCA 90 bp ACACTCATGGGATACATAGTGCCAAATGTCATCAAGGCAATAGCTATAGCAGAGACTGTGCCAAGACTGTaGAGGCAAATACAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TLMGYIVPNVIKAIAIAETVPRL*RQIQPG
Trigger: TCCTGGCTGTATTTGCCTCCACAGTCTTGGCACAGT...CTCTGCTATAGCTATTGCCTTGATGACATTTGGCACTATGTATCCCATGAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACTGGGGAAGACATGCATaGGGTGGCAGCACATACCTC +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDWGRHA*GGSTYL
Trigger: GAGGTATGTGCTGCCACCCCATGCATGTCTTCCCCA...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGACCAGTCCTCAATCCTTaGGTTGCTCCAATTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRPVLNP*VAPIPG
Trigger: TCCAGGAATTGGAGCAACTCAAGGATTGAGGACTGG...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp AGCAAAAGGTTTATTCCGAATAGAAAGCATCGTGAACAGGTTGAAACAAAGAGCGCCTGGCCAACATGGTaGAATCCCCCGTCTTTACTA +
Preference number: 4 (lower is better)
Translates to: SKRFIPNRKHREQVETKSAWPTW*NPPSLL
Trigger: TAGTAAAGACGGGGGATTTCACCATGTTGGCCAGGC...GCTCTTTGTTTCAACCTGTTCACGATGCTTTCTATTCGGAATAAACCTTTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp CCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTGTGTTACCTCACAGGTGTTGCCTCTaGATTGGTGTTGAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: PTRIIGALKEFSFIFVLPHRCCL*IGVEEV
Trigger: TACTTCCTCAACACCAATTCAGAGGCAACACCTGTG...AGGTAACACAAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR TCA 90 bp TGTGCCAAGACTGTGGAGGCAAATACAGCCAGGACTTCTAATCTTTCAAACCATAAAAGCAGGCCCAAATaGATAGACAGGGCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: CAKTVEANTARTSNLSNHKSRPK*IDRARF
Trigger: AAACCTAGCCCTGTCTATTCATTTGGGCCTGCTTTT...ATGGTTTGAAAGATTAGAAGTCCTGGCTGTATTTGCCTCCACAGTCTTGGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457724.2
CDS-3UTR GCA 90 bp CTTTCTTTTAATATAAAGAGAGCTCCCAACTGTGCCAAGACTGTGGAGGCAAATGGACCTTCGGTCAGCTaGTACAAGTCTAAATTCCCG +
Preference number: 4 (lower is better)
Translates to: LSFNIKRAPNCAKTVEANGPSVS*YKSKFP
Trigger: CGGGAATTTAGACTTGTAGCAGCTGACCGAAGGTCC...ATTTGCCTCCACAGTCTTGGCACAGTTGGGAGCTCTCTTTATATTAAAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454324.5
ENST00000457724.2
CDS-3UTR GCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATGAGAGCTCCCAACTGTaGCAAGACTGTGGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDESSQL*QDCGGK
Trigger: TTTGCCTCCACAGTCTTGGCACAGTTGGGAGCTCTC...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR GCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCCTCAATCCTTGAGTTaGTCCAATTCCTGGAACTCC +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSPQSLS*SNSWNS
Trigger: GGAGTTCCAGGAATTGGAGCAACTCAAGGATTGAGG...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAACTGTGCCAAGACTGTaGAGGCAAATACAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRTVPRL*RQIQPG
Trigger: TCCTGGCTGTATTTGCCTCCACAGTCTTGGCACAGT...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATGGGGTGGTGTTGTCTaGAGTAAGACTTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRWGGVV*SKTFPL
Trigger: CAGTGGGAAAGTCTTACTCCAGACAACACCACCCCA...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CCA 90 bp GTGCCAAATGTCATCAAGGCAATAGCTATAGCAGAGGCAGTGTCTACGGCAAAAAGTTGCTCCAATTCCTaGAACTCCAAGTCCTTGATT +
Preference number: 4 (lower is better)
Translates to: VPNVIKAIAIAEAVSTAKSCSNS*NSKSLI
Trigger: AATCAAGGACTTGGAGTTCCAGGAATTGGAGCAACT...TTTTGCCGTAGACACTGCCTCTGCTATAGCTATTGCCTTGATGACATTTGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTAAGACATGCATGGGGTaGCAGCACATACCTCTTAAC +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSKTCMG*QHIPLN
Trigger: GTTAAGAGGTATGTGCTGCCACCCCATGCATGTCTT...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATTGGGGAAGACATGCATaGGGTGGCAGCACATACCTC +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHWGRHA*GGSTYL
Trigger: GAGGTATGTGCTGCCACCCCATGCATGTCTTCCCCA...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR CAA 72 bp TCCACACAAGCTTCGACTAAGATCTGCAACATGCTCTaGAAGCCAGCTCGTACTAGCAGCTTTAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: STQASTKICNML*KPARTSSFKKK
Trigger: TTTCTTCTTAAAGCTGCTAGTACGAGCTGGCTTCAAGAGCATGTTGCAGATCTTAGTCGAAGCTTGTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454324.5
CDS-3UTR TCA 90 bp CTTCCCGTGTGTATCTCGGGCTGTTCCAAAAAGCGTTCTGCACTTTCTTTTAATGGTTTTCGAAAGAGATaGATTGTCCCCATGATAAGG +
Preference number: 4 (lower is better)
Translates to: LPVCISGCSKKRSALSFNGFRKR*IVPMIR
Trigger: CCTTATCATGGGGACAATTCATCTCTTTCGAAAACC...ATTAAAAGAAAGTGCAGAACGCTTTTTGGAACAGCCCGAGATACACACGGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACTCTGCAACATGCTCTTaGAGCCAGCTCGTACTAGCA +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDSATCS*SQLVLA
Trigger: TGCTAGTACGAGCTGGCTTCAAGAGCATGTTGCAGA...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATTCTGCAACATGCTCTTaGAGCCAGCTCGTACTAGCA +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDSATCS*SQLVLA
Trigger: TGCTAGTACGAGCTGGCTTCAAGAGCATGTTGCAGA...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000454324.5
CDS-3UTR TCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCCCAGGAGTGTTAAATaGAAATTCTGGAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSPRSVK*KFWRWT
Trigger: AGTCCACCTCCAGAATTTTCATTTAACACTCCTGGG...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp ACACTCATGGGATACATAGTGCCAAATGTCATCAAGGCAATAGCTATAGCAGAGCCCAGGAGTGTTAAATaGAAATTCTGGAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: TLMGYIVPNVIKAIAIAEPRSVK*KFWRWT
Trigger: AGTCCACCTCCAGAATTTTCATTTAACACTCCTGGG...CTCTGCTATAGCTATTGCCTTGATGACATTTGGCACTATGTATCCCATGAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACCCAGTCCTCAATCCTTaGGTTGCTCCAATTCCTGGA +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDPVLNP*VAPIPG
Trigger: TCCAGGAATTGGAGCAACTCAAGGATTGAGGACTGG...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATCCAGTCCTCAATCCTTaGGTTGCTCCAATTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDPVLNP*VAPIPG
Trigger: TCCAGGAATTGGAGCAACTCAAGGATTGAGGACTGG...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp AGGTTTATTCCGAATAGAAAGCATCGTGAACAGGTTGAAACAAAGAGCCACAAACCAGTCCTCAATCCTTaGGTTGCTCCAATTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RFIPNRKHREQVETKSHKPVLNP*VAPIPG
Trigger: TCCAGGAATTGGAGCAACTCAAGGATTGAGGACTGG...TTTGTGGCTCTTTGTTTCAACCTGTTCACGATGCTTTCTATTCGGAATAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATGGCAGGAGAATCATTTaGACTCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDGRRII*TQEAEV
Trigger: AACCTCTGCCTCCTGAGTTCAAATGATTCTCCTGCC...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGGCCTGGCCAACATGGTaGAATCCCCCGTCTTTACTA +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILAWPTW*NPPSLL
Trigger: TAGTAAAGACGGGGGATTTCACCATGTTGGCCAGGC...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCTCCTAGGTCATGTGTaGCTGCTGCTTGTTATACTT +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSLLGHV*LLLVIL
Trigger: AAGTATAACAAGCAGCAGTCACACATGACCTAGGAG...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTGATGACAATTCTGCTTaGCAGAGATGGCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSDDNSA*QRWLLG
Trigger: TCCAAGAAGCCATCTCTGTCAAGCAGAATTGTCATC...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGACACAGGTGTTGCCTCTaGATTGGTGTTGAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRHRCCL*IGVEEV
Trigger: TACTTCCTCAACACCAATTCAGAGGCAACACCTGTG...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATTTGAGGTCAGGAGTTTaGGACCAGCCCAGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDLRSGV*DQPSQN
Trigger: ATTTTGGCTGGGCTGGTCTCAAACTCCTGACCTCAA...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379343.6
CDS-3UTR TCA 90 bp GGATTCATTCGGGGAAGGAAGATACTGCTAAGTCCCGGAATAATTCCACACAAGTTCCACACAAGCTTCTaGGACATAAGCAAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: GFIRGRKILLSPGIIPHKFHTSF*DISKRF
Trigger: AAACCTTTTGCTTATGTCTCAGAAGCTTGTGTGGAA...CTTGTGTGGAATTATTCCGGGACTTAGCAGTATCTTCCTTCCCCGAATGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449777.5
CDS-3UTR GCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATGGACCTTCGGTCAGCTaGTACAAGTCTAAATTCCCG +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDGPSVS*YKSKFP
Trigger: CGGGAATTTAGACTTGTAGCAGCTGACCGAAGGTCC...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000379343.6
ENST00000435660.5
ENST00000454324.5
CDS-3UTR GCA 90 bp AGCAAAAGGTTTATTCCGAATAGAAAGCATCGTGAACAGGTTGAAACAAAGAGCGGACCTTCGGTCAGCTaGTACAAGTCTAAATTCCCG +
Preference number: 4 (lower is better)
Translates to: SKRFIPNRKHREQVETKSGPSVS*YKSKFP
Trigger: CGGGAATTTAGACTTGTAGCAGCTGACCGAAGGTCC...GCTCTTTGTTTCAACCTGTTCACGATGCTTTCTATTCGGAATAAACCTTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454324.5
CDS-3UTR GCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTGCTTCGACTAAGATCTaGAACATGCTCTTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSASTKI*NMLLKP
Trigger: TGGCTTCAAGAGCATGTTGCAGATCTTAGTCGAAGC...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000454324.5
CDS-3UTR GCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGACCTCAATCCTTGAGTTaGTCCAATTCCTGGAACTCC +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRPQSLS*SNSWNS
Trigger: GGAGTTCCAGGAATTGGAGCAACTCAAGGATTGAGG...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR GCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATCTTTGGTGGGACAGATaGACAGGTGTTGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDLWWDR*TGVASE
Trigger: TTCAGAGGCAACACCTGTGCATCTGTCCCACCAAAG...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCTGCCTATAGGCCTATaGTGGGCAAGTTCCTTATTT +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSLPIGL*WASSLF
Trigger: AAATAAGGAACTTGCCCAGCATAGGCCTATAGGCAG...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp CTTTCTTTTAATATAAAGAGAGCTCCCAACTGTGCCAAGACTGTGGAGGCAAATAGACTGAACAGGACATaGAGAGAAAAGCAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: LSFNIKRAPNCAKTVEANRLNRT*REKQAQ
Trigger: TTGGGCCTGCTTTTCTCTGCATGTCCTGTTCAGTCT...ATTTGCCTCCACAGTCTTGGCACAGTTGGGAGCTCTCTTTATATTAAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457724.2
CDS-3UTR CCA 90 bp TGTCATCAAGGCAATAGCTATAGCAGAGGCAGTGTCTACGGCAAAATAATTATTACTGTGCCAAGACTGTaGAGGCAAATACAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CHQGNSYSRGSVYGKIIITVPRL*RQIQPG
Trigger: TCCTGGCTGTATTTGCCTCCACAGTCTTGGCACAGT...AATAATTATTTTGCCGTAGACACTGCCTCTGCTATAGCTATTGCCTTGATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACTGGGGTGGTGTTGTCTaGAGTAAGACTTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDWGGVV*SKTFPL
Trigger: CAGTGGGAAAGTCTTACTCCAGACAACACCACCCCA...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATTGGGGTGGTGTTGTCTaGAGTAAGACTTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDWGGVV*SKTFPL
Trigger: CAGTGGGAAAGTCTTACTCCAGACAACACCACCCCA...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CCA 90 bp CCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTGTGTTACCTAAAAGTTTAGGACATTaGCTGCAACAGGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: PTRIIGALKEFSFIFVLPKSLGH*LQQAQT
Trigger: TGTCTGGGCCTGTTGCAGCCAATGTCCTAAACTTTT...AGGTAACACAAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR CCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAAAGACATGCATGGGGTaGCAGCACATACCTCTTAAC +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRKTCMG*QHIPLN
Trigger: GTTAAGAGGTATGTGCTGCCACCCCATGCATGTCTT...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTGTGTTACCTTTAAAGCACCTTTGGTaGGACAGATGCACAGGTGTT +
Preference number: 4 (lower is better)
Translates to: PTRIIGALKEFSFIFVLPLKHLW*DRCTGV
Trigger: AACACCTGTGCATCTGTCCCACCAAAGGTGCTTTAA...AGGTAACACAAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR CCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTTTAAAGCACCTTTGGTaGGACAGATGCACAGGTGTT +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSLKHLW*DRCTGV
Trigger: AACACCTGTGCATCTGTCCCACCAAAGGTGCTTTAA...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTTGGCAGCATCAGAACTaGAATTCAGATCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSWQHQN*NSDLLP
Trigger: AGGCAAGAGATCTGAATTCCAGTTCTGATGCTGCCA...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTTCTTTGTGTTACCTTTaGTCTGGGTCACACCAACTG +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSSLCYL*SGSHQL
Trigger: CAGTTGGTGTGACCCAGACCAAAGGTAACACAAAGA...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
3UTR CAA 72 bp GCCTTGAAGGAATTCTCATTCATCTTTGTGTTACCTTaGGTCTGGGTCACACCAACTGGTATACTGAATGCA +
Preference number: 4 (lower is better)
Translates to: ALKEFSFIFVLP*VWVTPTGILNA
Trigger: TGCATTCAGTATACCAGTTGGTGTGACCCAGACCAAAGGTAACACAAAGATGAATGAGAATTCCTTCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR TCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATTCTGCAACATGCTCTTaGAGCCAGCTCGTACTAGCA +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHSATCS*SQLVLA
Trigger: TGCTAGTACGAGCTGGCTTCAAGAGCATGTTGCAGA...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGTCTGCAACATGCTCTTaGAGCCAGCTCGTACTAGCA +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILSATCS*SQLVLA
Trigger: TGCTAGTACGAGCTGGCTTCAAGAGCATGTTGCAGA...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAATGAGTTTGTCCAACTaGCCAATAACATGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRMSLSN*PITWGG
Trigger: ACCACCCCATGTTATTGGTCAGTTGGACAAACTCAT...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp TTTATTCCGAATAGAAAGCATCGTGAACAGGTTGAAACAAAGAGCCACAAAAGTCCAGTCCTCAATCCTTaGGTTGCTCCAATTCCTGGA +
Preference number: 4 (lower is better)
Translates to: FIPNRKHREQVETKSHKSPVLNP*VAPIPG
Trigger: TCCAGGAATTGGAGCAACTCAAGGATTGAGGACTGG...ACTTTTGTGGCTCTTTGTTTCAACCTGTTCACGATGCTTTCTATTCGGAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp GCTGTAAGGTGTGTGTCCATGATTGAGACCAAAACCATAAGGCCTTGTTTGTGTCGTATCTTAGTAATGTaGCAGATCTACTCCATCAAG +
Preference number: 4 (lower is better)
Translates to: AVRCVSMIETKTIRPCLCRILVM*QIYSIK
Trigger: CTTGATGGAGTAGATCTGTCACATTACTAAGATACG...ACACAAACAAGGCCTTATGGTTTTGGTCTCAATCATGGACACACACCTTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGGGCAGGAGAATCATTTaGACTCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILGRRII*TQEAEV
Trigger: AACCTCTGCCTCCTGAGTTCAAATGATTCTCCTGCC...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCTGTCTAGCTTCAAGTaGTTCTGTGGCAAGATTTAC +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSLSSFK*FCGKIY
Trigger: GTAAATCTTGCCACAGAATCACTTGAAGCTAGACAG...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAGCTTCGACTAAGATCTaGAACATGCTCTTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRASTKI*NMLLKP
Trigger: TGGCTTCAAGAGCATGTTGCAGATCTTAGTCGAAGC...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000454324.5
CDS-3UTR GCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATCCTCAATCCTTGAGTTaGTCCAATTCCTGGAACTCC +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDPQSLS*SNSWNS
Trigger: GGAGTTCCAGGAATTGGAGCAACTCAAGGATTGAGG...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR GCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGCTTTGGTGGGACAGATaGACAGGTGTTGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILLWWDR*TGVASE
Trigger: TTCAGAGGCAACACCTGTGCATCTGTCCCACCAAAG...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGACTGCCTATAGGCCTATaGTGGGCAAGTTCCTTATTT +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRLPIGL*WASSLF
Trigger: AAATAAGGAACTTGCCCAGCATAGGCCTATAGGCAG...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACCGTCGAATTCTTACATaGACTGATCCAGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDRRILT*TDPASL
Trigger: CAGAGAGGCTGGATCAGTGCATGTAAGAATTCGACG...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435660.5
CDS-3UTR CCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGACTGTGCCAAGACTGTaGAGGCAAATACAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILTVPRL*RQIQPG
Trigger: TCCTGGCTGTATTTGCCTCCACAGTCTTGGCACAGT...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATACTGTGCCAAGACTGTaGAGGCAAATACAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHTVPRL*RQIQPG
Trigger: TCCTGGCTGTATTTGCCTCCACAGTCTTGGCACAGT...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGTGGGGTGGTGTTGTCTaGAGTAAGACTTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILWGGVV*SKTFPL
Trigger: CAGTGGGAAAGTCTTACTCCAGACAACACCACCCCA...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAAAAAGTTTAGGACATTaGCTGCAACAGGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRKSLGH*LQQAQT
Trigger: TGTCTGGGCCTGTTGCAGCCAATGTCCTAAACTTTT...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTAGTTGCTCCAATTCCTaGAACTCCAAGTCCTTGATT +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSSCSNS*NSKSLI
Trigger: AATCAAGGACTTGGAGTTCCAGGAATTGGAGCAACT...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATTCTTCTCTAGATAGCTaGCTGATGGCTGGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDSSLDS*LMAGKV
Trigger: GACTTTCCCAGCCATCAGCCAGCTATCTAGAGAAGA...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACTCTTCTCTAGATAGCTaGCTGATGGCTGGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDSSLDS*LMAGKV
Trigger: GACTTTCCCAGCCATCAGCCAGCTATCTAGAGAAGA...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTGTGTTACCTCTATATAATAATGCCTaGCCCAATGTCCCCTGTAAC +
Preference number: 4 (lower is better)
Translates to: PTRIIGALKEFSFIFVLPLYNNA*PNVPCN
Trigger: GTTACAGGGGACATTGGGCCAGGCATTATTATATAG...AGGTAACACAAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR CCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCTATATAATAATGCCTaGCCCAATGTCCCCTGTAAC +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSLYNNA*PNVPCN
Trigger: GTTACAGGGGACATTGGGCCAGGCATTATTATATAG...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCCTATAGGCCTATGCTaGGCAAGTTCCTTATTTTCA +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSPIGLC*ASSLFS
Trigger: TGAAAATAAGGAACTTGCCCAGCATAGGCCTATAGG...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAAATGGTGTTAGGCTGTaGTTCACCTATTCTCATGGC +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRNGVRL*FTYSHG
Trigger: GCCATGAGAATAGGTGAACCACAGCCTAACACCATT...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR CAA 72 bp TTGTGTCTTAGCTCTCCTACTAGGATTATCGGCGCCTaGAAGGAATTCTCATTCATCTTTGTGTTACCTTTG +
Preference number: 4 (lower is better)
Translates to: LCLSSPTRIIGA*KEFSFIFVLPL
Trigger: CAAAGGTAACACAAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGGAGAGCTAAGACACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR TCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAGGTTTTCGAAAGAGATaGATTGTCCCCATGATAAGG +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRGFRKR*IVPMIR
Trigger: CCTTATCATGGGGACAATTCATCTCTTTCGAAAACC...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282587.9
ENST00000379343.6
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGACGTACTAGCAGCTTCTaGGACATAAGCAAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRRTSSF*DISKRF
Trigger: AAACCTTTTGCTTATGTCTCAGAAGCTGCTAGTACG...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATATGAGTTTGTCCAACTaGCCAATAACATGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDMSLSN*PITWGG
Trigger: ACCACCCCATGTTATTGGTCAGTTGGACAAACTCAT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACATGAGTTTGTCCAACTaGCCAATAACATGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDMSLSN*PITWGG
Trigger: ACCACCCCATGTTATTGGTCAGTTGGACAAACTCAT...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATCCCAGGAGTGTTAAATaGAAATTCTGGAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDPRSVK*KFWRWT
Trigger: AGTCCACCTCCAGAATTTTCATTTAACACTCCTGGG...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCGTATCTTAGTAATGTaGCAGATCTACTCCATCAAG +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSRILVM*QIYSIK
Trigger: CTTGATGGAGTAGATCTGTCACATTACTAAGATACG...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATGATGACAATTCTGCTTaGCAGAGATGGCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDDDNSA*QRWLLG
Trigger: TCCAAGAAGCCATCTCTGTCAAGCAGAATTGTCATC...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGCACAGGTGTTGCCTCTaGATTGGTGTTGAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILHRCCL*IGVEEV
Trigger: TACTTCCTCAACACCAATTCAGAGGCAACACCTGTG...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGACTGTCTAGCTTCAAGTaGTTCTGTGGCAAGATTTAC +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRLSSFK*FCGKIY
Trigger: GTAAATCTTGCCACAGAATCACTTGAAGCTAGACAG...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp CTTTCTTTTAATATAAAGAGAGCTCCCAACTGTGCCAAGACTGTGGAGGCAAATGAAGGTGAGAAGGTGTaGATTAAGGTCTTGATAGGA +
Preference number: 4 (lower is better)
Translates to: LSFNIKRAPNCAKTVEANEGEKV*IKVLIG
Trigger: TCCTATCAAGACCTTAATTCACACCTTCTCACCTTC...ATTTGCCTCCACAGTCTTGGCACAGTTGGGAGCTCTCTTTATATTAAAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457724.2
CDS-3UTR GCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACGCTTCGACTAAGATCTaGAACATGCTCTTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDASTKI*NMLLKP
Trigger: TGGCTTCAAGAGCATGTTGCAGATCTTAGTCGAAGC...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGCCTCAATCCTTGAGTTaGTCCAATTCCTGGAACTCC +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILPQSLS*SNSWNS
Trigger: GGAGTTCCAGGAATTGGAGCAACTCAAGGATTGAGG...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTAAGGTCACATCACACTaGAGTCAACTACAAAACCAA +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSKVTSH*SQLQNQ
Trigger: TTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTT...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR GCA 90 bp AAGATACTGCTAAGTCCCGGAATAATTCCACACAAGCTTCGACTAAGATCTGCAAAGGTCACATCACACTaGAGTCAACTACAAAACCAA +
Preference number: 4 (lower is better)
Translates to: KILLSPGIIPHKLRLRSAKVTSH*SQLQNQ
Trigger: TTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTT...TGCAGATCTTAGTCGAAGCTTGTGTGGAATTATTCCGGGACTTAGCAGTATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454324.5
CDS-3UTR GCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTTTGGGATTCTTTCACTaGATATCACCAAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSLGFFH*ISPKVG
Trigger: CCCAACTTTTGGTGATATGCAGTGAAAGAATCCCAA...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACCTGCCTATAGGCCTATaGTGGGCAAGTTCCTTATTT +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDLPIGL*WASSLF
Trigger: AAATAAGGAACTTGCCCAGCATAGGCCTATAGGCAG...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACAAAAGTTTAGGACATTaGCTGCAACAGGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDKSLGH*LQQAQT
Trigger: TGTCTGGGCCTGTTGCAGCCAATGTCCTAAACTTTT...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATAAAAGTTTAGGACATTaGCTGCAACAGGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDKSLGH*LQQAQT
Trigger: TGTCTGGGCCTGTTGCAGCCAATGTCCTAAACTTTT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CCA 90 bp AGGTTTATTCCGAATAGAAAGCATCGTGAACAGGTTGAAACAAAGAGCCACAAAAAAAGTTTAGGACATTaGCTGCAACAGGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: RFIPNRKHREQVETKSHKKSLGH*LQQAQT
Trigger: TGTCTGGGCCTGTTGCAGCCAATGTCCTAAACTTTT...TTTGTGGCTCTTTGTTTCAACCTGTTCACGATGCTTTCTATTCGGAATAAACCT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATAAGACATGCATGGGGTaGCAGCACATACCTCTTAAC +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHKTCMG*QHIPLN
Trigger: GTTAAGAGGTATGTGCTGCCACCCCATGCATGTCTT...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATTTAAAGCACCTTTGGTaGGACAGATGCACAGGTGTT +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDLKHLW*DRCTGV
Trigger: AACACCTGTGCATCTGTCCCACCAAAGGTGCTTTAA...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATGTATTAAAGCACCTTTaGTGGGACAGATGCACAGGT +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDVLKHL*WDRCTG
Trigger: ACCTGTGCATCTGTCCCACCAAAGGTGCTTTAATAC...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATAATGGTGTTAGGCTGTaGTTCACCTATTCTCATGGC +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDNGVRL*FTYSHG
Trigger: GCCATGAGAATAGGTGAACCACAGCCTAACACCATT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACGTGTTACCTTTGGTCTaGGTCACACCAACTGGTATA +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDVLPLV*VTPTGI
Trigger: TATACCAGTTGGTGTGACCCAGACCAAAGGTAACAC...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR TCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACCGTACTAGCAGCTTCTaGGACATAAGCAAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDRTSSF*DISKRF
Trigger: AAACCTTTTGCTTATGTCTCAGAAGCTGCTAGTACG...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGATGAGTTTGTCCAACTaGCCAATAACATGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILMSLSN*PITWGG
Trigger: ACCACCCCATGTTATTGGTCAGTTGGACAAACTCAT...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATATGAGTTTGTCCAACTaGCCAATAACATGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHMSLSN*PITWGG
Trigger: ACCACCCCATGTTATTGGTCAGTTGGACAAACTCAT...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGCCCAGGAGTGTTAAATaGAAATTCTGGAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILPRSVK*KFWRWT
Trigger: AGTCCACCTCCAGAATTTTCATTTAACACTCCTGGG...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGACGTATCTTAGTAATGTaGCAGATCTACTCCATCAAG +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRRILVM*QIYSIK
Trigger: CTTGATGGAGTAGATCTGTCACATTACTAAGATACG...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR TCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGGATGACAATTCTGCTTaGCAGAGATGGCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILDDNSA*QRWLLG
Trigger: TCCAAGAAGCCATCTCTGTCAAGCAGAATTGTCATC...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCCTATTATAATATGGTaGCTTCGTAAAGCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSPIIIW*LRKAGL
Trigger: TAACCCTGCTTTACGAAGTCACCATATTATAATAGG...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGGATTATCGGCGCCTTaGAGGAATTCTCATTCATCT +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHGLSAP*RNSHSS
Trigger: AGATGAATGAGAATTCCTTCAAGGCGCCGATAATCC...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR TCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGAATTCTTACATGCACTaGTCCAGCCTCTCTGATGAG +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILNSYMH*SSLSDE
Trigger: CTCATCAGAGAGGCTGGATCAGTGCATGTAAGAATT...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435660.5
CDS-3UTR GCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGGCTTCGACTAAGATCTaGAACATGCTCTTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILASTKI*NMLLKP
Trigger: TGGCTTCAAGAGCATGTTGCAGATCTTAGTCGAAGC...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATTGGGATTCTTTCACTaGATATCACCAAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRLGFFH*ISPKVG
Trigger: CCCAACTTTTGGTGATATGCAGTGAAAGAATCCCAA...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAGGCCAAGGAACAGGTTaGCTTATTACATTTTACGAA +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRGQGTG*LITFYE
Trigger: TTCGTAAAATGTAATAAGGCAACCTGTTCCTTGGCC...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATCTGCCTATAGGCCTATaGTGGGCAAGTTCCTTATTT +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHLPIGL*WASSLF
Trigger: AAATAAGGAACTTGCCCAGCATAGGCCTATAGGCAG...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATGGAATTCAGATCTCTTaGCTCCTAGGCAGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDGIQIS*LLGSVF
Trigger: AAAAACACTGCCTAGGAGGCAAGAGATCTGAATTCC...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACGGAATTCAGATCTCTTaGCTCCTAGGCAGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDGIQIS*LLGSVF
Trigger: AAAAACACTGCCTAGGAGGCAAGAGATCTGAATTCC...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAGTCCTCTCCAGTACCTaGTACATTATATGTAATTCC +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRVLSST*YIICNS
Trigger: GGAATTACATATAATGTAGCAGGTACTGGAGAGGAC...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATATGTCATTAAACTATTaGTCAGGCACGGTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDMSLNY*SGTVAH
Trigger: GTGAGCTACCGTGCCTGAGCAATAGTTTAATGACAT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379343.6
CDS-3UTR CCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATAGTTGCTCCAATTCCTaGAACTCCAAGTCCTTGATT +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDSCSNS*NSKSLI
Trigger: AATCAAGGACTTGGAGTTCCAGGAATTGGAGCAACT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAAATCTCCAGGAGCATTaGATTCCAGGAAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRNLQEH*IPGKLS
Trigger: ACTTAACTTTCCTGGAATCCAATGCTCCTGGAGATT...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATCACTTTAAAATCCTATaGGGATGGGGAAGACATGCA +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDHFKIL*GWGRHA
Trigger: TGCATGTCTTCCCCATCCCCATAGGATTTTAAAGTG...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACCACTTTAAAATCCTATaGGGATGGGGAAGACATGCA +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDHFKIL*GWGRHA
Trigger: TGCATGTCTTCCCCATCCCCATAGGATTTTAAAGTG...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGTATTAAAGCACCTTTaGTGGGACAGATGCACAGGT +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHVLKHL*WDRCTG
Trigger: ACCTGTGCATCTGTCCCACCAAAGGTGCTTTAATAC...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGGTATTAAAGCACCTTTaGTGGGACAGATGCACAGGT +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILVLKHL*WDRCTG
Trigger: ACCTGTGCATCTGTCCCACCAAAGGTGCTTTAATAC...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATCTATATAATAATGCCTaGCCCAATGTCCCCTGTAAC +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDLYNNA*PNVPCN
Trigger: GTTACAGGGGACATTGGGCCAGGCATTATTATATAG...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACCCTATAGGCCTATGCTaGGCAAGTTCCTTATTTTCA +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDPIGLC*ASSLFS
Trigger: TGAAAATAAGGAACTTGCCCAGCATAGGCCTATAGG...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATTGGCAGCATCAGAACTaGAATTCAGATCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHWQHQN*NSDLLP
Trigger: AGGCAAGAGATCTGAATTCCAGTTCTGATGCTGCCA...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGGTTTTCGAAAGAGATaGATTGTCCCCATGATAAGG +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHGFRKR*IVPMIR
Trigger: CCTTATCATGGGGACAATTCATCTCTTTCGAAAACC...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282587.9
ENST00000435660.5
CDS-3UTR TCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGCGTACTAGCAGCTTCTaGGACATAAGCAAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILRTSSF*DISKRF
Trigger: AAACCTTTTGCTTATGTCTCAGAAGCTGCTAGTACG...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATCGTACTAGCAGCTTCTaGGACATAAGCAAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHRTSSF*DISKRF
Trigger: AAACCTTTTGCTTATGTCTCAGAAGCTGCTAGTACG...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGCTGTCTAGCTTCAAGTaGTTCTGTGGCAAGATTTAC +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILLSSFK*FCGKIY
Trigger: GTAAATCTTGCCACAGAATCACTTGAAGCTAGACAG...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAGTCATGTGTGACTGCTaGTTGTTATACTTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRVMCDC*LLYFLE
Trigger: TTCCAAAAAGTATAACAAGCAGCAGTCACACATGAC...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTAAAAGGATTTCAAAGTaGTGCTCCTATTTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSKRISK*CSYLKV
Trigger: CACTTTCAAATAGGAGCAGCACTTTGAAATCCTTTT...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATGGCCAAGGAACAGGTTaGCTTATTACATTTTACGAA +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDGQGTG*LITFYE
Trigger: TTCGTAAAATGTAATAAGGCAACCTGTTCCTTGGCC...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp CTTAGCTCTCCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTGCAGTTCAGATTTCATaGATGACCCTAATTCATATT +
Preference number: 4 (lower is better)
Translates to: LSSPTRIIGALKEFSFIFAVQIS*MTLIHI
Trigger: AATATGAATTAGGGTCATGCATGAAATCTGAACTGC...AAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGGAGAGCTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR GCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGGGAATTCAGATCTCTTaGCTCCTAGGCAGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILGIQIS*LLGSVF
Trigger: AAAAACACTGCCTAGGAGGCAAGAGATCTGAATTCC...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATGTCCTCTCCAGTACCTaGTACATTATATGTAATTCC +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDVLSST*YIICNS
Trigger: GGAATTACATATAATGTAGCAGGTACTGGAGAGGAC...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGAGTTGCTCCAATTCCTaGAACTCCAAGTCCTTGATT +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILSCSNS*NSKSLI
Trigger: AATCAAGGACTTGGAGTTCCAGGAATTGGAGCAACT...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATAGTTGCTCCAATTCCTaGAACTCCAAGTCCTTGATT +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHSCSNS*NSKSLI
Trigger: AATCAAGGACTTGGAGTTCCAGGAATTGGAGCAACT...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp TTTATTCCGAATAGAAAGCATCGTGAACAGGTTGAAACAAAGAGCCACAAAAGTAGTTGCTCCAATTCCTaGAACTCCAAGTCCTTGATT +
Preference number: 4 (lower is better)
Translates to: FIPNRKHREQVETKSHKSSCSNS*NSKSLI
Trigger: AATCAAGGACTTGGAGTTCCAGGAATTGGAGCAACT...ACTTTTGTGGCTCTTTGTTTCAACCTGTTCACGATGCTTTCTATTCGGAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACAATCTCCAGGAGCATTaGATTCCAGGAAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDNLQEH*IPGKLS
Trigger: ACTTAACTTTCCTGGAATCCAATGCTCCTGGAGATT...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATAATCTCCAGGAGCATTaGATTCCAGGAAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDNLQEH*IPGKLS
Trigger: ACTTAACTTTCCTGGAATCCAATGCTCCTGGAGATT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGCACTTTAAAATCCTATaGGGATGGGGAAGACATGCA +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILHFKIL*GWGRHA
Trigger: TGCATGTCTTCCCCATCCCCATAGGATTTTAAAGTG...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTGTGTTACCTACACAGAACTGTGTTTaGTACCTGAACACTTTAAAA +
Preference number: 4 (lower is better)
Translates to: PTRIIGALKEFSFIFVLPTQNCV*YLNTLK
Trigger: TTTTAAAGTGTTCAGGTACCAAACACAGTTCTGTGT...AGGTAACACAAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR CCA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTACACAGAACTGTGTTTaGTACCTGAACACTTTAAAA +
Preference number: 4 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSTQNCV*YLNTLK
Trigger: TTTTAAAGTGTTCAGGTACCAAACACAGTTCTGTGT...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGCTATATAATAATGCCTaGCCCAATGTCCCCTGTAAC +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILLYNNA*PNVPCN
Trigger: GTTACAGGGGACATTGGGCCAGGCATTATTATATAG...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATCCTATAGGCCTATGCTaGGCAAGTTCCTTATTTTCA +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHPIGLC*ASSLFS
Trigger: TGAAAATAAGGAACTTGCCCAGCATAGGCCTATAGG...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGACTTCAAGTGATTCTGTaGCAAGATTTACTAGTAAGG +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRLQVIL*QDLLVR
Trigger: CCTTACTAGTAAATCTTGCCACAGAATCACTTGAAG...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACCTGGGTCACACCAACTaGTATACTGAATGCATATTA +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDLGHTN*YTECIL
Trigger: TAATATGCATTCAGTATACCAGTTGGTGTGACCCAG...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR GCA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACGTCATGTGTGACTGCTaGTTGTTATACTTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDVMCDC*LLYFLE
Trigger: TTCCAAAAAGTATAACAAGCAGCAGTCACACATGAC...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAAGGATTTCAAAGTGCTaGTCCTATTTGAAAGTGAAT +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRRISKC*SYLKVN
Trigger: ATTCACTTTCAAATAGGAGCAGCACTTTGAAATCCT...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAAAAAGGATTTCAAAGTaGTGCTCCTATTTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRKRISK*CSYLKV
Trigger: CACTTTCAAATAGGAGCAGCACTTTGAAATCCTTTT...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAGCAGTTCAGATTTCATaGATGACCCTAATTCATATT +
Preference number: 4 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRAVQIS*MTLIHI
Trigger: AATATGAATTAGGGTCATGCATGAAATCTGAACTGC...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGTCCTCTCCAGTACCTaGTACATTATATGTAATTCC +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHVLSST*YIICNS
Trigger: GGAATTACATATAATGTAGCAGGTACTGGAGAGGAC...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGGTCCTCTCCAGTACCTaGTACATTATATGTAATTCC +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILVLSST*YIICNS
Trigger: GGAATTACATATAATGTAGCAGGTACTGGAGAGGAC...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATCATCCGTTTAGCAATTaGGCATACATTCTACAGATT +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDHPFSN*AYILQI
Trigger: AATCTGTAGAATGTATGCCCAATTGCTAAACGGATG...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGGTTCACCTATTCTCATaGCACCTCAAATTAATGGCT +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILVHLFS*HLKLMA
Trigger: AGCCATTAATTTGAGGTGCCATGAGAATAGGTGAAC...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR TCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGCCTATTATAATATGGTaGCTTCGTAAAGCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILPIIIW*LRKAGL
Trigger: TAACCCTGCTTTACGAAGTCACCATATTATAATAGG...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGTCATGTGTGACTGCTaGTTGTTATACTTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHVMCDC*LLYFLE
Trigger: TTCCAAAAAGTATAACAAGCAGCAGTCACACATGAC...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATAGGATTTCAAAGTGCTaGTCCTATTTGAAAGTGAAT +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDRISKC*SYLKVN
Trigger: ATTCACTTTCAAATAGGAGCAGCACTTTGAAATCCT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATAAAAGGATTTCAAAGTaGTGCTCCTATTTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDKRISK*CSYLKV
Trigger: CACTTTCAAATAGGAGCAGCACTTTGAAATCCTTTT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATGCAGTTCAGATTTCATaGATGACCCTAATTCATATT +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDAVQIS*MTLIHI
Trigger: AATATGAATTAGGGTCATGCATGAAATCTGAACTGC...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATAAAGCTCAGATGATTTaGCCATGGGTTATAAAACTA +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDKAQMI*PWVIKL
Trigger: TAGTTTTATAACCCATGGGCAAATCATCTGAGCTTT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATAAGGTATTTAGGACATaGTCACTTATTACCACAGAT +
Preference number: 4 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDKVFRT*SLITTD
Trigger: ATCTGTGGTAATAAGTGACCATGTCCTAAATACCTT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATCAGATGATTTGCCCATaGGTTATAAAACTACTTCCT +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHQMICP*VIKLLP
Trigger: AGGAAGTAGTTTTATAACCCATGGGCAAATCATCTG...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATCATCCGTTTAGCAATTaGGCATACATTCTACAGATT +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHHPFSN*AYILQI
Trigger: AATCTGTAGAATGTATGCCCAATTGCTAAACGGATG...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGCATCCGTTTAGCAATTaGGCATACATTCTACAGATT +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILHPFSN*AYILQI
Trigger: AATCTGTAGAATGTATGCCCAATTGCTAAACGGATG...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGGCAGTTCAGATTTCATaGATGACCCTAATTCATATT +
Preference number: 4 (lower is better)
Translates to: HDPNSYLVEINGGRRIILAVQIS*MTLIHI
Trigger: AATATGAATTAGGGTCATGCATGAAATCTGAACTGC...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR GCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATAAAGCTCAGATGATTTaGCCATGGGTTATAAAACTA +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHKAQMI*PWVIKL
Trigger: TAGTTTTATAACCCATGGGCAAATCATCTGAGCTTT...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATAAGGTATTTAGGACATaGTCACTTATTACCACAGAT +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHKVFRT*SLITTD
Trigger: ATCTGTGGTAATAAGTGACCATGTCCTAAATACCTT...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CCA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATACACAGAACTGTGTTTaGTACCTGAACACTTTAAAA +
Preference number: 4 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHTQNCV*YLNTLK
Trigger: TTTTAAAGTGTTCAGGTACCAAACACAGTTCTGTGT...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
3UTR CAA 72 bp AAAGGTTTATTCCGAATAGAAAGCATCGTGAACAGGTaGAAACAAAGAGCCACAAAAGTACCAACTAATAAT +
Preference number: 4 (lower is better)
Translates to: KGLFRIESIVNR*KQRATKVPTNN
Trigger: ATTATTAGTTGGTACTTTTGTGGCTCTTTGTTTCAACCTGTTCACGATGCTTTCTATTCGGAATAAACCTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp ACATGGGGTGGTGTTGTCTGGAGTAAGACTTTCCCACTGTACACACTCATGGGAGAAAAGTTTAGGACATaGGCTGCAACAGGCCCAGAC +
Preference number: 5 (lower is better)
Translates to: TWGGVVWSKTFPLYTLMGEKFRT*AATGPD
Trigger: GTCTGGGCCTGTTGCAGCCAATGTCCTAAACTTTTC...TCCCATGAGTGTGTACAGTGGGAAAGTCTTACTCCAGACAACACCACCCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp AAAGAGAGCTCCCAACTGTGCCAAGACTGTGGAGGCAAATACAGCCAGGACTTCTCCTCAATCCTTGAGTaGCTCCAATTCCTGGAACTC +
Preference number: 5 (lower is better)
Translates to: KESSQLCQDCGGKYSQDFSSILE*LQFLEL
Trigger: GAGTTCCAGGAATTGGAGCAACTCAAGGATTGAGGA...GAAGTCCTGGCTGTATTTGCCTCCACAGTCTTGGCACAGTTGGGAGCTCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GTGCCAAATGTCATCAAGGCAATAGCTATAGCAGAGGCAGTGTCTACGGCAAAAACCAGTCCTCAATCCTaGAGTTGCTCCAATTCCTGG +
Preference number: 5 (lower is better)
Translates to: VPNVIKAIAIAEAVSTAKTSPQS*SCSNSW
Trigger: CCAGGAATTGGAGCAACTCAAGGATTGAGGACTGGT...TTTTGCCGTAGACACTGCCTCTGCTATAGCTATTGCCTTGATGACATTTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp AAGCATGCTGCTGTAAGGTGTGTGTCCATGATTGAGACCAAAACCATAAGGCCTACCAGTCCTCAATCCTaGAGTTGCTCCAATTCCTGG +
Preference number: 5 (lower is better)
Translates to: KHAAVRCVSMIETKTIRPTSPQS*SCSNSW
Trigger: CCAGGAATTGGAGCAACTCAAGGATTGAGGACTGGT...AGGCCTTATGGTTTTGGTCTCAATCATGGACACACACCTTACAGCAGCATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATGTTATCCCAGCACTTaGGTAGGCCGAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRCYPST*VGRGGW
Trigger: CCACCCACCTCGGCCTACCAAAGTGCTGGGATAACA...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379343.6
CDS-3UTR CAA 90 bp CCCAACTGTGCCAAGACTGTGGAGGCAAATACAGCCAGGACTTCTAATCTTTCAATGAGCAAGAACCATTaGTTCATTGGCATCTCGTCG +
Preference number: 5 (lower is better)
Translates to: PNCAKTVEANTARTSNLSMSKNH*FIGISS
Trigger: CGACGAGATGCCAATGAACAAATGGTTCTTGCTCAT...TGAAAGATTAGAAGTCCTGGCTGTATTTGCCTCCACAGTCTTGGCACAGTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454324.5
CDS-3UTR CAA 90 bp AAGATACTGCTAAGTCCCGGAATAATTCCACACAAGCTTCGACTAAGATCTGCAATCTGCAACATGCTCTaGAAGCCAGCTCGTACTAGC +
Preference number: 5 (lower is better)
Translates to: KILLSPGIIPHKLRLRSAICNML*KPARTS
Trigger: GCTAGTACGAGCTGGCTTCAAGAGCATGTTGCAGAT...TGCAGATCTTAGTCGAAGCTTGTGTGGAATTATTCCGGGACTTAGCAGTATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454324.5
CDS-3UTR CAA 90 bp GGATTCATTCGGGGAAGGAAGATACTGCTAAGTCCCGGAATAATTCCACACAAGATGAGCAAGAACCATTaGTTCATTGGCATCTCGTCG +
Preference number: 5 (lower is better)
Translates to: GFIRGRKILLSPGIIPHKMSKNH*FIGISS
Trigger: CGACGAGATGCCAATGAACAAATGGTTCTTGCTCAT...CTTGTGTGGAATTATTCCGGGACTTAGCAGTATCTTCCTTCCCCGAATGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTGAAAAGTTTAGGACATaGGCTGCAACAGGCCCAGAC +
Preference number: 5 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSEKFRT*AATGPD
Trigger: GTCTGGGCCTGTTGCAGCCAATGTCCTAAACTTTTC...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp ATTCGGGGAAGGAAGATACTGCTAAGTCCCGGAATAATTCCACACAAGCTTCTGTGGAACTCCAAGTCCTaGATTAAGCATGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: IRGRKILLSPGIIPHKLLWNSKS*IKHAAV
Trigger: TACAGCAGCATGCTTAATCAAGGACTTGGAGTTCCA...CAGAAGCTTGTGTGGAATTATTCCGGGACTTAGCAGTATCTTCCTTCCCCGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449777.5
CDS-3UTR CAA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTACCAGTCCTCAATCCTaGAGTTGCTCCAATTCCTGG +
Preference number: 5 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSTSPQS*SCSNSW
Trigger: CCAGGAATTGGAGCAACTCAAGGATTGAGGACTGGT...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp CCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTGTGTTACCTAGGCAGGAGAATCATTaGAACTCAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: PTRIIGALKEFSFIFVLPRQENH*NSGGRG
Trigger: ACCTCTGCCTCCTGAGTTCAAATGATTCTCCTGCCT...AGGTAACACAAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR CAA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTATGCCTGAACAGGGGTaGCAGATGCCAAAGACAATG +
Preference number: 5 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSMPEQG*QMPKTM
Trigger: CATTGTCTTTGGCATCTGCAACCCCTGTTCAGGCAT...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTGGTATTAAAGCACCTTaGGTGGGACAGATGCACAGG +
Preference number: 5 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSGIKAP*VGQMHR
Trigger: CCTGTGCATCTGTCCCACCAAAGGTGCTTTAATACC...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAATCTGCAACATGCTCTaGAAGCCAGCTCGTACTAGC +
Preference number: 5 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRICNML*KPARTS
Trigger: GCTAGTACGAGCTGGCTTCAAGAGCATGTTGCAGAT...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000454324.5
CDS-3UTR CAA 90 bp TATAAAGAGAGCTCCCAACTGTGCCAAGACTGTGGAGGCAAATACAGCCAGGACCAAAACCATAAGGCCTaGTTTGTGTGTTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: YKESSQLCQDCGGKYSQDQNHKA*FVCLEE
Trigger: TTCTTCTAAACACACAAACAAGGCCTTATGGTTTTG...GTCCTGGCTGTATTTGCCTCCACAGTCTTGGCACAGTTGGGAGCTCTCTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTTCCTCAATCCTTGAGTaGCTCCAATTCCTGGAACTC +
Preference number: 5 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSSSILE*LQFLEL
Trigger: GAGTTCCAGGAATTGGAGCAACTCAAGGATTGAGGA...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAACCAGTCCTCAATCCTaGAGTTGCTCCAATTCCTGG +
Preference number: 5 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRTSPQS*SCSNSW
Trigger: CCAGGAATTGGAGCAACTCAAGGATTGAGGACTGGT...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAAGGCAGGAGAATCATTaGAACTCAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRRQENH*NSGGRG
Trigger: ACCTCTGCCTCCTGAGTTCAAATGATTCTCCTGCCT...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAATGCCTGAACAGGGGTaGCAGATGCCAAAGACAATG +
Preference number: 5 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRMPEQG*QMPKTM
Trigger: CATTGTCTTTGGCATCTGCAACCCCTGTTCAGGCAT...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATCTTGAGGTCAGGAGTTaGAGACCAGCCCAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDLEVRS*RPAQPK
Trigger: TTTTGGCTGGGCTGGTCTCAAACTCCTGACCTCAAG...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379343.6
CDS-3UTR CAA 90 bp GCCAAATGTCATCAAGGCAATAGCTATAGCAGAGGCAGTGTCTACGGCAAAATAAGCATCGTGAACAGGTaGAAACAAAGAGCCACAAAA +
Preference number: 5 (lower is better)
Translates to: AKCHQGNSYSRGSVYGKISIVNR*KQRATK
Trigger: TTTTGTGGCTCTTTGTTTCAACCTGTTCACGATGCT...TATTTTGCCGTAGACACTGCCTCTGCTATAGCTATTGCCTTGATGACATTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACATCTGCAACATGCTCTaGAAGCCAGCTCGTACTAGC +
Preference number: 5 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDICNML*KPARTS
Trigger: GCTAGTACGAGCTGGCTTCAAGAGCATGTTGCAGAT...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACGAAAAGTTTAGGACATaGGCTGCAACAGGCCCAGAC +
Preference number: 5 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDEKFRT*AATGPD
Trigger: GTCTGGGCCTGTTGCAGCCAATGTCCTAAACTTTTC...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp AGGTTTATTCCGAATAGAAAGCATCGTGAACAGGTTGAAACAAAGAGCCACAAAGAAAAGTTTAGGACATaGGCTGCAACAGGCCCAGAC +
Preference number: 5 (lower is better)
Translates to: RFIPNRKHREQVETKSHKEKFRT*AATGPD
Trigger: GTCTGGGCCTGTTGCAGCCAATGTCCTAAACTTTTC...TTTGTGGCTCTTTGTTTCAACCTGTTCACGATGCTTTCTATTCGGAATAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTTGGAACTCCAAGTCCTaGATTAAGCATGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSWNSKS*IKHAAV
Trigger: TACAGCAGCATGCTTAATCAAGGACTTGGAGTTCCA...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATCCTCAATCCTTGAGTaGCTCCAATTCCTGGAACTC +
Preference number: 5 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRSSILE*LQFLEL
Trigger: GAGTTCCAGGAATTGGAGCAACTCAAGGATTGAGGA...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACACCAGTCCTCAATCCTaGAGTTGCTCCAATTCCTGG +
Preference number: 5 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDTSPQS*SCSNSW
Trigger: CCAGGAATTGGAGCAACTCAAGGATTGAGGACTGGT...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp AGCAAAAGGTTTATTCCGAATAGAAAGCATCGTGAACAGGTTGAAACAAAGAGCAGGCAGGAGAATCATTaGAACTCAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: SKRFIPNRKHREQVETKSRQENH*NSGGRG
Trigger: ACCTCTGCCTCCTGAGTTCAAATGATTCTCCTGCCT...GCTCTTTGTTTCAACCTGTTCACGATGCTTTCTATTCGGAATAAACCTTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACATGCCTGAACAGGGGTaGCAGATGCCAAAGACAATG +
Preference number: 5 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDMPEQG*QMPKTM
Trigger: CATTGTCTTTGGCATCTGCAACCCCTGTTCAGGCAT...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACGGTATTAAAGCACCTTaGGTGGGACAGATGCACAGG +
Preference number: 5 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDGIKAP*VGQMHR
Trigger: CCTGTGCATCTGTCCCACCAAAGGTGCTTTAATACC...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTTGGAATTCAGATCTCTaGCCTCCTAGGCAGTGTTTT +
Preference number: 5 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSWNSDL*PPRQCF
Trigger: AAAACACTGCCTAGGAGGCAAGAGATCTGAATTCCA...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCCTCAAATTAATGGCTaGGGTGTTGGTGTAGGTAAC +
Preference number: 5 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSPQING*GVGVGN
Trigger: GTTACCTACACCAACACCCAAGCCATTAATTTGAGG...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp CTTAGCTCTCCTACTAGGATTATCGGCGCCTTGAAGGAATTCTCATTCATCTTTAGCATCGTGAACAGGTaGAAACAAAGAGCCACAAAA +
Preference number: 5 (lower is better)
Translates to: LSSPTRIIGALKEFSFIFSIVNR*KQRATK
Trigger: TTTTGTGGCTCTTTGTTTCAACCTGTTCACGATGCT...AAAGATGAATGAGAATTCCTTCAAGGCGCCGATAATCCTAGTAGGAGAGCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR CAA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGATCTGCAACATGCTCTaGAAGCCAGCTCGTACTAGC +
Preference number: 5 (lower is better)
Translates to: HDPNSYLVEINGGRRIILICNML*KPARTS
Trigger: GCTAGTACGAGCTGGCTTCAAGAGCATGTTGCAGAT...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAATGAGCAAGAACCATTaGTTCATTGGCATCTCGTCG +
Preference number: 5 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRMSKNH*FIGISS
Trigger: CGACGAGATGCCAATGAACAAATGGTTCTTGCTCAT...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATGGAACTCCAAGTCCTaGATTAAGCATGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRWNSKS*IKHAAV
Trigger: TACAGCAGCATGCTTAATCAAGGACTTGGAGTTCCA...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATTCCTCAATCCTTGAGTaGCTCCAATTCCTGGAACTC +
Preference number: 5 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDSSILE*LQFLEL
Trigger: GAGTTCCAGGAATTGGAGCAACTCAAGGATTGAGGA...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACTCCTCAATCCTTGAGTaGCTCCAATTCCTGGAACTC +
Preference number: 5 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDSSILE*LQFLEL
Trigger: GAGTTCCAGGAATTGGAGCAACTCAAGGATTGAGGA...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp TTTATTCCGAATAGAAAGCATCGTGAACAGGTTGAAACAAAGAGCCACAAAAGTAGGCAGGAGAATCATTaGAACTCAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: FIPNRKHREQVETKSHKSRQENH*NSGGRG
Trigger: ACCTCTGCCTCCTGAGTTCAAATGATTCTCCTGCCT...ACTTTTGTGGCTCTTTGTTTCAACCTGTTCACGATGCTTTCTATTCGGAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGGGTATTAAAGCACCTTaGGTGGGACAGATGCACAGG +
Preference number: 5 (lower is better)
Translates to: HDPNSYLVEINGGRRIILGIKAP*VGQMHR
Trigger: CCTGTGCATCTGTCCCACCAAAGGTGCTTTAATACC...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATGGAATTCAGATCTCTaGCCTCCTAGGCAGTGTTTT +
Preference number: 5 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRWNSDL*PPRQCF
Trigger: AAAACACTGCCTAGGAGGCAAGAGATCTGAATTCCA...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAAGCATCGTGAACAGGTaGAAACAAAGAGCCACAAAA +
Preference number: 5 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRSIVNR*KQRATK
Trigger: TTTTGTGGCTCTTTGTTTCAACCTGTTCACGATGCT...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACATGAGCAAGAACCATTaGTTCATTGGCATCTCGTCG +
Preference number: 5 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDMSKNH*FIGISS
Trigger: CGACGAGATGCCAATGAACAAATGGTTCTTGCTCAT...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATTGGAACTCCAAGTCCTaGATTAAGCATGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDWNSKS*IKHAAV
Trigger: TACAGCAGCATGCTTAATCAAGGACTTGGAGTTCCA...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACTGGAACTCCAAGTCCTaGATTAAGCATGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDWNSKS*IKHAAV
Trigger: TACAGCAGCATGCTTAATCAAGGACTTGGAGTTCCA...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGTCCTCAATCCTTGAGTaGCTCCAATTCCTGGAACTC +
Preference number: 5 (lower is better)
Translates to: HDPNSYLVEINGGRRIILSSILE*LQFLEL
Trigger: GAGTTCCAGGAATTGGAGCAACTCAAGGATTGAGGA...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTAAGTGCTGCTCCTATTaGAAAGTGAATGAGTTGACT +
Preference number: 5 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSKCCSY*KVNELT
Trigger: AGTCAACTCATTCACTTTCAAATAGGAGCAGCACTT...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAGACAGAGATGGCTTCTaGGATGTTTTTAATCCACAG +
Preference number: 5 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRDRDGF*DVFNPQ
Trigger: CTGTGGATTAAAAACATCCAAGAAGCCATCTCTGTC...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAAGGCCAAGGAACAGGTaGCCTTATTACATTTTACGA +
Preference number: 5 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRRPRNR*PYYILR
Trigger: TCGTAAAATGTAATAAGGCAACCTGTTCCTTGGCCT...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTGAAAGCTCAGATGATTaGCCCATGGGTTATAAAACT +
Preference number: 5 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSESSDD*PMGYKT
Trigger: AGTTTTATAACCCATGGGCAAATCATCTGAGCTTTC...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACAGGATTATCGGCGCCTaGAAGGAATTCTCATTCATC +
Preference number: 5 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDRIIGA*KEFSFI
Trigger: GATGAATGAGAATTCCTTCAAGGCGCCGATAATCCT...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR CAA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATATGAGCAAGAACCATTaGTTCATTGGCATCTCGTCG +
Preference number: 5 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHMSKNH*FIGISS
Trigger: CGACGAGATGCCAATGAACAAATGGTTCTTGCTCAT...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGATGAGCAAGAACCATTaGTTCATTGGCATCTCGTCG +
Preference number: 5 (lower is better)
Translates to: HDPNSYLVEINGGRRIILMSKNH*FIGISS
Trigger: CGACGAGATGCCAATGAACAAATGGTTCTTGCTCAT...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp AGATCTACTCCATCAAGTGGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTGAGTCTATCATGGTCTaGGTTGTCCAATTCTATTAT +
Preference number: 5 (lower is better)
Translates to: RSTPSSGSYKGKVTSHCSESIMV*VVQFYY
Trigger: ATAATAGAATTGGACAACCAAGACCATGATAGACTC...ACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCCACTTGATGGAGTAGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp AAGATACTGCTAAGTCCCGGAATAATTCCACACAAGCTTCGACTAAGATCTGCAGAGTCTATCATGGTCTaGGTTGTCCAATTCTATTAT +
Preference number: 5 (lower is better)
Translates to: KILLSPGIIPHKLRLRSAESIMV*VVQFYY
Trigger: ATAATAGAATTGGACAACCAAGACCATGATAGACTC...TGCAGATCTTAGTCGAAGCTTGTGTGGAATTATTCCGGGACTTAGCAGTATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454324.5
CDS-3UTR CAA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAAAGTGCTGCTCCTATTaGAAAGTGAATGAGTTGACT +
Preference number: 5 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRKCCSY*KVNELT
Trigger: AGTCAACTCATTCACTTTCAAATAGGAGCAGCACTT...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATAGGCCAAGGAACAGGTaGCCTTATTACATTTTACGA +
Preference number: 5 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDRPRNR*PYYILR
Trigger: TCGTAAAATGTAATAAGGCAACCTGTTCCTTGGCCT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGACACACAGAACTGTGTTaGGTACCTGAACACTTTAAA +
Preference number: 5 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRHTELC*VPEHFK
Trigger: TTTAAAGTGTTCAGGTACCAAACACAGTTCTGTGTG...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGATCTTTGTGTTACCTTaGGTCTGGGTCACACCAACT +
Preference number: 5 (lower is better)
Translates to: HDPNSYLVEINGGRRIILIFVLP*VWVTPT
Trigger: AGTTGGTGTGACCCAGACCAAAGGTAACACAAAGAT...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS TCA 90 bp AGTAGTAATTTATTATTTCCTCTCTCGGATGAAGGTGAGAAGGTGTaGATTAAGGTCTTGATAGGAGCATCATTTCGGATTGGTGGAGAA +
Preference number: 5 (lower is better)
Translates to: SSNLLFPLSDEGEKV*IKVLIGASFRIGGE
Trigger: TTCTCCACCAATCCGAAATGATGCTCCTATCAAGACCTTAATTCACACCTTCTCACCTTCATCCGAGAGAGGAAATAATAAATTACTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457724.2
CDS-3UTR CAA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGAGCATCGTGAACAGGTaGAAACAAAGAGCCACAAAA +
Preference number: 5 (lower is better)
Translates to: HDPNSYLVEINGGRRIILSIVNR*KQRATK
Trigger: TTTTGTGGCTCTTTGTTTCAACCTGTTCACGATGCT...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp CTTGAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATAGCATCGTGAACAGGTaGAAACAAAGAGCCACAAAA +
Preference number: 5 (lower is better)
Translates to: LEIQVLSSTCYIICNSKHSIVNR*KQRATK
Trigger: TTTTGTGGCTCTTTGTTTCAACCTGTTCACGATGCT...ATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGACAAAACCATAAGGCCTaGTTTGTGTGTTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRQNHKA*FVCLEE
Trigger: TTCTTCTAAACACACAAACAAGGCCTTATGGTTTTG...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GGCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGAGAGTCTATCATGGTCTaGGTTGTCCAATTCTATTAT +
Preference number: 5 (lower is better)
Translates to: GSYKGKVTSHCSQLQNQRESIMV*VVQFYY
Trigger: ATAATAGAATTGGACAACCAAGACCATGATAGACTC...TCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATAAGTGCTGCTCCTATTaGAAAGTGAATGAGTTGACT +
Preference number: 5 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDKCCSY*KVNELT
Trigger: AGTCAACTCATTCACTTTCAAATAGGAGCAGCACTT...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATCACACAGAACTGTGTTaGGTACCTGAACACTTTAAA +
Preference number: 5 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDHTELC*VPEHFK
Trigger: TTTAAAGTGTTCAGGTACCAAACACAGTTCTGTGTG...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATGAAAGCTCAGATGATTaGCCCATGGGTTATAAAACT +
Preference number: 5 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDESSDD*PMGYKT
Trigger: AGTTTTATAACCCATGGGCAAATCATCTGAGCTTTC...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACAAACATGCAACAGTTTaGTGTCTTAGCTCTCCTACT +
Preference number: 5 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDKHATV*CLSSPT
Trigger: AGTAGGAGAGCTAAGACACAAAACTGTTGCATGTTT...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR CAA 90 bp GCTCTTATAAAGGTAAGGTCACATCACACTGCAGTCAACTACAAAACCAAAGATCAAAACCATAAGGCCTaGTTTGTGTGTTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: ALIKVRSHHTAVNYKTKDQNHKA*FVCLEE
Trigger: TTCTTCTAAACACACAAACAAGGCCTTATGGTTTTG...ATCTTTGGTTTTGTAGTTGACTGCAGTGTGATGTGACCTTACCTTTATAAGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000379343.6
ENST00000406369.2
ENST00000435660.5
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACCAAAACCATAAGGCCTaGTTTGTGTGTTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDQNHKA*FVCLEE
Trigger: TTCTTCTAAACACACAAACAAGGCCTTATGGTTTTG...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp TGTCATCAAGGCAATAGCTATAGCAGAGGCAGTGTCTACGGCAAAATAATTATTCAAAACCATAAGGCCTaGTTTGTGTGTTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: CHQGNSYSRGSVYGKIIIQNHKA*FVCLEE
Trigger: TTCTTCTAAACACACAAACAAGGCCTTATGGTTTTG...AATAATTATTTTGCCGTAGACACTGCCTCTGCTATAGCTATTGCCTTGATGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp GAAATTCAGGTCCTCTCCAGTACCTGCTACATTATATGTAATTCCAAACATGACGAGTCTATCATGGTCTaGGTTGTCCAATTCTATTAT +
Preference number: 5 (lower is better)
Translates to: EIQVLSSTCYIICNSKHDESIMV*VVQFYY
Trigger: ATAATAGAATTGGACAACCAAGACCATGATAGACTC...GTCATGTTTGGAATTACATATAATGTAGCAGGTACTGGAGAGGACCTGAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp AGGTTTATTCCGAATAGAAAGCATCGTGAACAGGTTGAAACAAAGAGCCACAAAGAGTCTATCATGGTCTaGGTTGTCCAATTCTATTAT +
Preference number: 5 (lower is better)
Translates to: RFIPNRKHREQVETKSHKESIMV*VVQFYY
Trigger: ATAATAGAATTGGACAACCAAGACCATGATAGACTC...TTTGTGGCTCTTTGTTTCAACCTGTTCACGATGCTTTCTATTCGGAATAAACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449777.5
ENST00000454324.5
CDS-3UTR CAA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGGAAAGCTCAGATGATTaGCCCATGGGTTATAAAACT +
Preference number: 5 (lower is better)
Translates to: HDPNSYLVEINGGRRIILESSDD*PMGYKT
Trigger: AGTTTTATAACCCATGGGCAAATCATCTGAGCTTTC...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS-3UTR CAA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGAATTCTCATTCATCTTaGTGTTACCTTTGGTCTGGG +
Preference number: 5 (lower is better)
Translates to: HDPNSYLVEINGGRRIILNSHSS*CYLWSG
Trigger: CCCAGACCAAAGGTAACACAAAGATGAATGAGAATT...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282587.9
CDS-3UTR CAA 90 bp CATGACCCTAATTCATATTTAGTTGAGATCAATGGAGGAAGAAGAATCATCCTGCAAAACCATAAGGCCTaGTTTGTGTGTTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: HDPNSYLVEINGGRRIILQNHKA*FVCLEE
Trigger: TTCTTCTAAACACACAAACAAGGCCTTATGGTTTTG...CAGGATGATTCTTCTTCCTCCATTGATCTCAACTAAATATGAATTAGGGTCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282587.9
ENST00000357055.7
ENST00000406369.2
ENST00000435660.5
CDS GCA 72 bp CCAAAGAGCAGTATCTTCCAGGACATGATAAGGAGCTaGACAGCTCCCGCCGGAAGCCGTTCTGGGTGCTCG +
Preference number: 6 (lower is better)
Translates to: PKSSIFQDMIRS*TAPAGSRSGCS
Trigger: CGAGCACCCAGAACGGCTTCCGGCGGGAGCTGTGCAGCTCCTTATCATGTCCTGGAAGATACTGCTCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357055.7
CDS TCA 72 bp TGCACTGATCCAGCCTCTCTGATGAGTTTGTCCAACTaGCCAATAACATGGGGTGGTGTTGTCTGGAGTAAG +
Preference number: 6 (lower is better)
Translates to: CTDPASLMSLSN*PITWGGVVWSK
Trigger: CTTACTCCAGACAACACCACCCCATGTTATTGGTCAGTTGGACAAACTCATCAGAGAGGCTGGATCAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435660.5