RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC30A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000158014

Ensembl transcript IDs: ENST00000374276.4, ENST00000374278.7, ENST00000498060.1

Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTATACCCGCTGAGTCCCCACCCTGGCTGTAGTCAGATGGGAGGCTaGGAAGAGCTCCATTCCTGGAGTGGGGCAGAGGTCAGGAGGGGG +
Preference number: 1 (lower is better)
Translates to: LYPLSPHPGCSQMGG*EELHSWSGAEVRRG
Trigger: CCCCCTCCTGACCTCTGCCCCACTCCAGGAATGGAGCTCTTCCCAGCCTCCCATCTGACTACAGCCAGGGTGGGGACTCAGCGGGTATAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR CCA 90 bp ACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCCTCTaGACCGAGTGCAGCCCCACTTGTCTCCCTTTCCCTCCACCATGT +
Preference number: 1 (lower is better)
Translates to: THKPQEAAVSLLAGL*TECSPTCLPFPPPC
Trigger: ACATGGTGGAGGGAAAGGGAGACAAGTGGGGCTGCACTCGGTCCAGAGGCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR TCA 90 bp GTTCTCAACCCTGTGAGGGAGGCATCAACCCTGTCGGTGTACAGATaGGACTGTGGGGCAGAGGCCAGCTCGCCCAAGGCACTTGCTTAC +
Preference number: 1 (lower is better)
Translates to: VLNPVREASTLSVYR*DCGAEASSPKALAY
Trigger: GTAAGCAAGTGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTCATCTGTACACCGACAGGGTTGATGCCTCCCTCACAGGGTTGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR TCA 90 bp CAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTGCAGAACCCAAGCTaGAATCTCTCTACCCCCTGCCCACCACCTGTGCCAAAGTTGTTT +
Preference number: 1 (lower is better)
Translates to: QKCQGAWRLLVQNPS*NLSTPCPPPVPKLF
Trigger: AAACAACTTTGGCACAGGTGGTGGGCAGGGGGTAGAGAGATTTCAGCTTGGGTTCTGCACTAACAGCCTCCAAGCCCCCTGGCACTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR TCA 90 bp TCCAGGCCAGTGCTTTCCACAGACTTTTCACAGACCTGGAGGGGCTaGAGGACCCACCTACCTAGAACACAGGCGATCAGGATGACAGTG +
Preference number: 1 (lower is better)
Translates to: SRPVLSTDFSQTWRG*RTHLPRTQAIRMTV
Trigger: CACTGTCATCCTGATCGCCTGTGTTCTAGGTAGGTGGGTCCTTCAGCCCCTCCAGGTCTGTGAAAAGTCTGTGGAAAGCACTGGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR CCA 90 bp CTCTTACCTAGTAAGAAGCCTCTCCCCTCCAGGAAAGGGAACATTTaGCTCATAGCTGAAGTGACTAAGGCACAGATAGGCCTCAGGTGC +
Preference number: 1 (lower is better)
Translates to: LLPSKKPLPSRKGNI*LIAEVTKAQIGLRC
Trigger: GCACCTGAGGCCTATCTGTGCCTTAGTCACTTCAGCTATGAGCCAAATGTTCCCTTTCCTGGAGGGGAGAGGCTTCTTACTAGGTAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR CCA 90 bp CCCCAGGATGGTAAAAGTAACCAATCTTCAACAACCACAGGTACTTaGCCAACTGGCTCTTGTTCTCAACCCTGTGAGGGAGGCATCAAC +
Preference number: 1 (lower is better)
Translates to: PQDGKSNQSSTTTGT*PTGSCSQPCEGGIN
Trigger: GTTGATGCCTCCCTCACAGGGTTGAGAACAAGAGCCAGTTGGCCAAGTACCTGTGGTTGTTGAAGATTGGTTACTTTTACCATCCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CCA 90 bp GCCAGGCTGAGAATGGGGCATGAGGCAGGCAGTATGGGCGCGCTGGGGCCAGCCAGTCAGATGGGAGGCTaGGAAGAGCTCCATTCCTGG +
Preference number: 2 (lower is better)
Translates to: ARLRMGHEAGSMGALGPASQMGG*EELHSW
Trigger: CCAGGAATGGAGCTCTTCCCAGCCTCCCATCTGACT...GGCTGGCCCCAGCGCGCCCATACTGCCTGCCTCATGCCCCATTCTCAGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CCA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGGCCTCAGGTGCCTCCTaGCTCCCTGCCTCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: LLPPWARTVKTNSALPLGASGAS*LPASGR
Trigger: CCTCCCTGAGGCAGGGAGCCAGGAGGCACCTGAGGC...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR TCA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGGCTGGGAAGCCCACCTaGCTCCTCAGTGAGGCAGCC +
Preference number: 2 (lower is better)
Translates to: LLPPWARTVKTNSALPLGAGKPT*LLSEAA
Trigger: GGCTGCCTCACTGAGGAGTCAGGTGGGCTTCCCAGC...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR GCA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTCAGATAGGCCTCAGGTaGCTCCTGGCTCCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSQIGLR*LLAPCL
Trigger: GAGGCAGGGAGCCAGGAGGCACCTGAGGCCTATCTG...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CCA 90 bp CCTTTCCCTCCACCATGTCAGGCTCCGACTGGGTCAGGCCAGGTAGGCAACAGACAGCCCTTCCAGAGCTaGCCCAGGAGCTGGAAGAGC +
Preference number: 2 (lower is better)
Translates to: PFPPPCQAPTGSGQVGNRQPFQS*PRSWKS
Trigger: GCTCTTCCAGCTCCTGGGCCAGCTCTGGAAGGGCTG...TCTGTTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACATGGTGGAGGGAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CCA 90 bp CCACCCCTAAGTCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCGCAGTATGGGCGCGCTaGGGCCAGCCTCCCCTTGGA +
Preference number: 2 (lower is better)
Translates to: PPLSQESSHTSPRKLRFPAVWAR*GQPPLG
Trigger: TCCAAGGGGAGGCTGGCCCCAGCGCGCCCATACTGC...GGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGACTTAGGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR GCA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTTGCAGGTCCTGTTCATaGCCCAGTTGGTGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSCRSCS*PSWCLA
Trigger: AGCCAGGCACCAACTGGGGCATGAACAGGACCTGCA...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR GCA 90 bp GATGAGACTGTGGGGCAGAGGCCAGCTCGCCCAAGGCACTTGCTTACAATGGCACTCAGTCCAGCCACCTaGAGGTCCTGTTCATGCCCC +
Preference number: 2 (lower is better)
Translates to: DETVGQRPARPRHLLTMALSPAT*RSCSCP
Trigger: GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAG...TGCCATTGTAAGCAAGTGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CCA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGGTCAGGAGGGGGACCTaGTTTACAACACAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: LLPPWARTVKTNSALPLGVRRGT*FTTQLG
Trigger: CCCCAGCTGTGTTGTAAACCAGGTCCCCCTCCTGAC...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CCA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTGTCAGGAGGGGGACCTaGTTTACAACACAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSVRRGT*FTTQLG
Trigger: CCCCAGCTGTGTTGTAAACCAGGTCCCCCTCCTGAC...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR GCA 90 bp GATGAGACTGTGGGGCAGAGGCCAGCTCGCCCAAGGCACTTGCTTACAATGGCATGCAGGTCCTGTTCATaGCCCAGTTGGTGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: DETVGQRPARPRHLLTMACRSCS*PSWCLA
Trigger: AGCCAGGCACCAACTGGGGCATGAACAGGACCTGCA...TGCCATTGTAAGCAAGTGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CCA 90 bp GATGAGACTGTGGGGCAGAGGCCAGCTCGCCCAAGGCACTTGCTTACAATGGCAGAAGAGCTCCATTCCTaGAGTGGGGCAGAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: DETVGQRPARPRHLLTMAEELHS*SGAEVR
Trigger: CCTGACCTCTGCCCCACTCCAGGAATGGAGCTCTTC...TGCCATTGTAAGCAAGTGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CCA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGAAGTGCCAGGGGGCTTaGAGGCTGTTAGTGCAGAAC +
Preference number: 2 (lower is better)
Translates to: LLPPWARTVKTNSALPLGKCQGA*RLLVQN
Trigger: GTTCTGCACTAACAGCCTCCAAGCCCCCTGGCACTT...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CCA 90 bp GATGAGACTGTGGGGCAGAGGCCAGCTCGCCCAAGGCACTTGCTTACAATGGCAATGTCAGGCTCCGACTaGGTCAGGCCAGGTAGGCAA +
Preference number: 2 (lower is better)
Translates to: DETVGQRPARPRHLLTMAMSGSD*VRPGRQ
Trigger: TTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACAT...TGCCATTGTAAGCAAGTGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR CAA 90 bp ACGTCCCGTGGCTCACCACCTTTGCCCCTGCGAGTGGTAGAACATTaGCTGAGGATTAGGCCCAAATACAGCCCTTCCAGAGCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: TSRGSPPLPLRVVEH*LRIRPKYSPSRAGP
Trigger: TGGGCCAGCTCTGGAAGGGCTGTATTTGGGCCTAATCCTCAGCAAATGTTCTACCACTCGCAGGGGCAAAGGTGGTGAGCCACGGGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR TCA 90 bp GATGAGACTGTGGGGCAGAGGCCAGCTCGCCCAAGGCACTTGCTTACAATGGCAGTGCAGAACCCAAGCTaGAATCTCTCTACCCCCTGC +
Preference number: 2 (lower is better)
Translates to: DETVGQRPARPRHLLTMAVQNPS*NLSTPC
Trigger: GCAGGGGGTAGAGAGATTTCAGCTTGGGTTCTGCAC...TGCCATTGTAAGCAAGTGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CCA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCGAAGAGCTCCATTCCTaGAGTGGGGCAGAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGEELHS*SGAEVR
Trigger: CCTGACCTCTGCCCCACTCCAGGAATGGAGCTCTTC...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR TCA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCTCTTTCTGGAGACTCTaGATCCCCTGGGACACTCTC +
Preference number: 2 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGSFWRL*IPWDTL
Trigger: GAGAGTGTCCCAGGGGATTCAGAGTCTCCAGAAAGA...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR GCA 90 bp CAACAGAGTTGGCCCAGCCATATCTTTCTGGAGACTCTGAATCCCCTGGGACACCACCCCCGTGCCTATTaGTATAGGCAGATGGAGGGG +
Preference number: 2 (lower is better)
Translates to: QQSWPSHIFLETLNPLGHHPRAY*YRQMEG
Trigger: CCCCTCCATCTGCCTATAGCAATAGGCACGGGGGTG...GTGTCCCAGGGGATTCAGAGTCTCCAGAAAGATATGGCTGGGCCAACTCTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CCA 90 bp GTGACACAGGACTCCCTGATAACTGGGCATGTTGTCTCGATGAGTCGGGGACAGAGTCAGATGGGAGGCTaGGAAGAGCTCCATTCCTGG +
Preference number: 2 (lower is better)
Translates to: VTQDSLITGHVVSMSRGQSQMGG*EELHSW
Trigger: CCAGGAATGGAGCTCTTCCCAGCCTCCCATCTGACT...CTGTCCCCGACTCATCGAGACAACATGCCCAGTTATCAGGGAGTCCTGTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR TCA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTTTGTGTTGGCACAGCTaGGGAAATAAGGAAAGAGGA +
Preference number: 2 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSLCWHS*GNKERG
Trigger: TCCTCTTTCCTTATTTCCTCAGCTGTGCCAACACAA...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR GCA 90 bp CAACAGAGTTGGCCCAGCCATATCTTTCTGGAGACTCTGAATCCCCTGGGACACAATCTCTCTACCCCCTaGCCACCACCTGTGCCAAAG +
Preference number: 2 (lower is better)
Translates to: QQSWPSHIFLETLNPLGHNLSTP*PPPVPK
Trigger: CTTTGGCACAGGTGGTGGGCAGGGGGTAGAGAGATT...GTGTCCCAGGGGATTCAGAGTCTCCAGAAAGATATGGCTGGGCCAACTCTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR TCA 90 bp CCTGTCCCCAGGATGGTAAAAGTAACCAATCTTCAACAACCACAGGTACTTGGCCTGTCGGTGTACAGATaGGACTGTGGGGCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: PVPRMVKVTNLQQPQVLGLSVYR*DCGAEA
Trigger: GGCCTCTGCCCCACAGTCTCATCTGTACACCGACAG...GCCAAGTACCTGTGGTTGTTGAAGATTGGTTACTTTTACCATCCTGGGGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CCA 90 bp CCACCTTTGCCCCTGCGAGTGGTAGAACATTTGCTGAGGATTAGGCCCAAATACGGTTTACAACACAGCTaGGGTAGGCAAAGTCCTGGC +
Preference number: 2 (lower is better)
Translates to: PPLPLRVVEHLLRIRPKYGLQHS*GRQSPG
Trigger: GCCAGGACTTTGCCTACCCCAGCTGTGTTGTAAACC...GTATTTGGGCCTAATCCTCAGCAAATGTTCTACCACTCGCAGGGGCAAAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CCA 90 bp CCTGTCCCCAGGATGGTAAAAGTAACCAATCTTCAACAACCACAGGTACTTGGCATGTCAGGCTCCGACTaGGTCAGGCCAGGTAGGCAA +
Preference number: 2 (lower is better)
Translates to: PVPRMVKVTNLQQPQVLGMSGSD*VRPGRQ
Trigger: TTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACAT...GCCAAGTACCTGTGGTTGTTGAAGATTGGTTACTTTTACCATCCTGGGGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CCA 90 bp CCTGTCCCCAGGATGGTAAAAGTAACCAATCTTCAACAACCACAGGTACTTGGCAAGTGCCAGGGGGCTTaGAGGCTGTTAGTGCAGAAC +
Preference number: 2 (lower is better)
Translates to: PVPRMVKVTNLQQPQVLGKCQGA*RLLVQN
Trigger: GTTCTGCACTAACAGCCTCCAAGCCCCCTGGCACTT...GCCAAGTACCTGTGGTTGTTGAAGATTGGTTACTTTTACCATCCTGGGGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CAA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGGGGGCCAGCCTCCCCTaGGACGTCCCGTGGCTCACC +
Preference number: 3 (lower is better)
Translates to: LLPPWARTVKTNSALPLGGASLP*DVPWLT
Trigger: GGTGAGCCACGGGACGTCCAAGGGGAGGCTGGCCCC...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
67% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR GCA 72 bp CCTGGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTaGAGGTCCTGTTCATGCCCCAGTTGGTGCCTGGCT +
Preference number: 3 (lower is better)
Translates to: PGWAWGTLSPAT*RSCSCPSWCLA
Trigger: AGCCAGGCACCAACTGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR CCA 72 bp CCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCCTCTaGACCGAGTGCAGCCCCACTTGTCTCCCTTTCCCT +
Preference number: 3 (lower is better)
Translates to: PQEAAVSLLAGL*TECSPTCLPFP
Trigger: AGGGAAAGGGAGACAAGTGGGGCTGCACTCGGTCCAGAGGCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR TCA 72 bp CCTGTGAGGGAGGCATCAACCCTGTCGGTGTACAGATaGGACTGTGGGGCAGAGGCCAGCTCGCCCAAGGCA +
Preference number: 3 (lower is better)
Translates to: PVREASTLSVYR*DCGAEASSPKA
Trigger: TGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTCATCTGTACACCGACAGGGTTGATGCCTCCCTCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR CCA 72 bp CAGAGGTCAGGAGGGGGACCTGGTTTACAACACAGCTaGGGTAGGCAAAGTCCTGGCTGGGCCTGGGGGACA +
Preference number: 3 (lower is better)
Translates to: QRSGGGPGLQHS*GRQSPGWAWGT
Trigger: TGTCCCCCAGGCCCAGCCAGGACTTTGCCTACCCCAGCTGTGTTGTAAACCAGGTCCCCCTCCTGACCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR CCA 72 bp CTGAGTCCCCACCCTGGCTGTAGTCAGATGGGAGGCTaGGAAGAGCTCCATTCCTGGAGTGGGGCAGAGGTC +
Preference number: 3 (lower is better)
Translates to: LSPHPGCSQMGG*EELHSWSGAEV
Trigger: GACCTCTGCCCCACTCCAGGAATGGAGCTCTTCCCAGCCTCCCATCTGACTACAGCCAGGGTGGGGACTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CAA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGCGTGGCTCACCACCTTaGCCCCTGCGAGTGGTAGAA +
Preference number: 3 (lower is better)
Translates to: LLPPWARTVKTNSALPLGRGSPP*PLRVVE
Trigger: TTCTACCACTCGCAGGGGCAAAGGTGGTGAGCCACG...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CAA 90 bp CCTTTCCCTCCACCATGTCAGGCTCCGACTGGGTCAGGCCAGGTAGGCAACAGAGAAGTGCCAGGGGGCTaGGAGGCTGTTAGTGCAGAA +
Preference number: 3 (lower is better)
Translates to: PFPPPCQAPTGSGQVGNREVPGG*EAVSAE
Trigger: TTCTGCACTAACAGCCTCCAAGCCCCCTGGCACTTC...TCTGTTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACATGGTGGAGGGAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR CCA 72 bp GGAGGCATCAACCCTGTCGGTGTACAGATGAGACTGTaGGGCAGAGGCCAGCTCGCCCAAGGCACTTGCTTA +
Preference number: 3 (lower is better)
Translates to: GGINPVGVQMRL*GRGQLAQGTCL
Trigger: TAAGCAAGTGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTCATCTGTACACCGACAGGGTTGATGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR-3UTR CAA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTCGAGTGGTAGAACATTaGCTGAGGATTAGGCCCAAA +
Preference number: 3 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSRVVEH*LRIRPK
Trigger: TTTGGGCCTAATCCTCAGCAAATGTTCTACCACTCG...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR TCA 72 bp GTGCTTTCCACAGACTTTTCACAGACCTGGAGGGGCTaGAGGACCCACCTACCTAGAACACAGGCGATCAGG +
Preference number: 3 (lower is better)
Translates to: VLSTDFSQTWRG*RTHLPRTQAIR
Trigger: CCTGATCGCCTGTGTTCTAGGTAGGTGGGTCCTTCAGCCCCTCCAGGTCTGTGAAAAGTCTGTGGAAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR TCA 72 bp AGGTACTTGGCCAACTGGCTCTTGTTCTCAACCCTGTaGGGGAGGCATCAACCCTGTCGGTGTACAGATGAG +
Preference number: 3 (lower is better)
Translates to: RYLANWLLFSTL*GRHQPCRCTDE
Trigger: CTCATCTGTACACCGACAGGGTTGATGCCTCCCTCACAGGGTTGAGAACAAGAGCCAGTTGGCCAAGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR TCA 72 bp AACAGAGTTGGCCCAGCCATATCTTTCTGGAGACTCTaGATCCCCTGGGACACTCTCAGGGCAACAGAAGTG +
Preference number: 3 (lower is better)
Translates to: NRVGPAISFWRL*IPWDTLRATEV
Trigger: CACTTCTGTTGCCCTGAGAGTGTCCCAGGGGATTCAGAGTCTCCAGAAAGATATGGCTGGGCCAACTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR CCA 72 bp AGAGACAGACCTTGTGACACAGGACTCCCTGATAACTaGGCATGTTGTCTCGATGAGTCGGGGACAGGTTTC +
Preference number: 3 (lower is better)
Translates to: RDRPCDTGLPDN*ACCLDESGTGF
Trigger: GAAACCTGTCCCCGACTCATCGAGACAACATGCCCAGTTATCAGGGAGTCCTGTGTCACAAGGTCTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR CCA 72 bp AGTAAGAAGCCTCTCCCCTCCAGGAAAGGGAACATTTaGCTCATAGCTGAAGTGACTAAGGCACAGATAGGC +
Preference number: 3 (lower is better)
Translates to: SKKPLPSRKGNI*LIAEVTKAQIG
Trigger: GCCTATCTGTGCCTTAGTCACTTCAGCTATGAGCCAAATGTTCCCTTTCCTGGAGGGGAGAGGCTTCTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR CCA 72 bp GGTAAAAGTAACCAATCTTCAACAACCACAGGTACTTaGCCAACTGGCTCTTGTTCTCAACCCTGTGAGGGA +
Preference number: 3 (lower is better)
Translates to: GKSNQSSTTTGT*PTGSCSQPCEG
Trigger: TCCCTCACAGGGTTGAGAACAAGAGCCAGTTGGCCAAGTACCTGTGGTTGTTGAAGATTGGTTACTTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp GCCAGGCTGAGAATGGGGCATGAGGCAGGCAGTATGGGCGCGCTGGGGCCAGCCTCCCCCGGCTCCCGCTaGGGCTGCAGCTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: ARLRMGHEAGSMGALGPASPGSR*GCSSGS
Trigger: AGAGCCGGAGCTGCAGCCGCAGCGGGAGCCGGGGGA...GGCTGGCCCCAGCGCGCCCATACTGCCTGCCTCATGCCCCATTCTCAGCCTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCGGCTCCCGCTGCGGCTaGAGCTCCGGCTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPGSRCG*SSGSGS
Trigger: GGAGCCAGAGCCGGAGCTGCAGCCGCAGCGGGAGCC...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp GCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAAGCCGCCCCGCCGAGTaGGCCCTGAAAGTTGCGCGC +
Preference number: 4 (lower is better)
Translates to: AGPGGHSVQPPAGPVHAPSRPAE*ALKVAR
Trigger: GCGCGCAACTTTCAGGGCGCACTCGGCGGGGCGGCT...TGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCGCTGAGCAGTCAGTCTaGGGGGCCCTGGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPAEQSV*GALACL
Trigger: CAGGCATGCCAGGGCCCCTCAGACTGACTGCTCAGC...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp GCCAGGCTGAGAATGGGGCATGAGGCAGGCAGTATGGGCGCGCTGGGGCCAGCCCAGTTGGTGCCTGGCTaGGCAGTCAGTCTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ARLRMGHEAGSMGALGPAQLVPG*AVSLRG
Trigger: GCCCCTCAGACTGACTGCTCAGCCAGGCACCAACTG...GGCTGGCCCCAGCGCGCCCATACTGCCTGCCTCATGCCCCATTCTCAGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp GCCAGGCTGAGAATGGGGCATGAGGCAGGCAGTATGGGCGCGCTGGGGCCAGCCCTGGGGTTCTCCTCCTaGTGGTTGGTGGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: ARLRMGHEAGSMGALGPALGFSS*WLVVPW
Trigger: CCACGGCACCACCAACCAGCAGGAGGAGAACCCCAG...GGCTGGCCCCAGCGCGCCCATACTGCCTGCCTCATGCCCCATTCTCAGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp GCCAGGCTGAGAATGGGGCATGAGGCAGGCAGTATGGGCGCGCTGGGGCCAGCCGGCCTCTGGACCGAGTaGAGCCCCACTTGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: ARLRMGHEAGSMGALGPAGLWTE*SPTCLP
Trigger: AGGGAGACAAGTGGGGCTGCACTCGGTCCAGAGGCC...GGCTGGCCCCAGCGCGCCCATACTGCCTGCCTCATGCCCCATTCTCAGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GCCAGGCTGAGAATGGGGCATGAGGCAGGCAGTATGGGCGCGCTGGGGCCAGCCAGGCAGCTCGGACGCTaGGGTTCTCCTCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ARLRMGHEAGSMGALGPARQLGR*GSPPAG
Trigger: ACCAGCAGGAGGAGAACCCCAGCGTCCGAGCTGCCT...GGCTGGCCCCAGCGCGCCCATACTGCCTGCCTCATGCCCCATTCTCAGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCCGCCGATCACATGGATaGAGGCAGCTCGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPRRSHG*RQLGRW
Trigger: CCAGCGTCCGAGCTGCCTTCATCCATGTGATCGGCG...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp GCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCACACCTGACTCCTCAGTaGGGCAGCCTCGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: AGPGGHSVQPPAGPVHAPHLTPQ*GSLGPQ
Trigger: CTGTGGCCCGAGGCTGCCTCACTGAGGAGTCAGGTG...TGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp GCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGCTGGGAAGCCCACCTaGCTCCTCAGTGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: AGPGGHSVQPPAGPVHAPAGKPT*LLSEAA
Trigger: GGCTGCCTCACTGAGGAGTCAGGTGGGCTTCCCAGC...TGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCTTTCCCTCCACCATGTCAGGCTCCGACTGGGTCAGGCCAGGTAGGCAACAGATCCCCCGGCTCCCGCTaGGGCTGCAGCTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: PFPPPCQAPTGSGQVGNRSPGSR*GCSSGS
Trigger: AGAGCCGGAGCTGCAGCCGCAGCGGGAGCCGGGGGA...TCTGTTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACATGGTGGAGGGAAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp GCCAGGCTGAGAATGGGGCATGAGGCAGGCAGTATGGGCGCGCTGGGGCCAGCCTCCCTTGGAGGCGGCTaGTGGCTGTCTTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: ARLRMGHEAGSMGALGPASLGGG*WLSSAQ
Trigger: CTGTGCTGAAGACAGCCAGCAGCCGCCTCCAAGGGA...GGCTGGCCCCAGCGCGCCCATACTGCCTGCCTCATGCCCCATTCTCAGCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCTGGTTGGTGGTGCCGTaGCTGTGCCCATGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPWLVVP*LCPWPD
Trigger: GTCTGGCCATGGGCACAGCCACGGCACCACCAACCA...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCCAGCCCTTCCAGAGCTaGCCCAGGAGCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPQPFQS*PRSWKS
Trigger: GCTCTTCCAGCTCCTGGGCCAGCTCTGGAAGGGCTG...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCGCTCAAATGAGAGTGTaGGGGTCCTCACCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPAQMRV*GSSPPC
Trigger: GCACGGGGGTGAGGACCCTCACACTCTCATTTGAGC...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp GCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGCCAGCTCAATGGCCTaGAAGTCCAGGCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: AGPGGHSVQPPAGPVHAPASSMA*KSRPGR
Trigger: CCGACCTGGCCTGGACTTGCAGGCCATTGAGCTGGC...TGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp GCCAGGCTGAGAATGGGGCATGAGGCAGGCAGTATGGGCGCGCTGGGGCCAGCCTGCAGGTCCTGTTCATaGCCCAGTTGGTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ARLRMGHEAGSMGALGPACRSCS*PSWCLA
Trigger: AGCCAGGCACCAACTGGGGCATGAACAGGACCTGCA...GGCTGGCCCCAGCGCGCCCATACTGCCTGCCTCATGCCCCATTCTCAGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCACCGGATTGCCGGCCTaGCGTCCAACAGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPTGLPA*RPTDAA
Trigger: AGCAGCATCTGTTGGACGCCAGGCCGGCAATCCGGT...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCACAGACAGAACAGGCTaGGCCACCGTCAGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPTDRTG*ATVSAQ
Trigger: CTGGGCACTGACGGTGGCCCAGCCTGTTCTGTCTGT...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCCTTGGAGGCGGCTGCTaGCTGTCTTCAGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPLGGGC*LSSAQP
Trigger: AGGCTGTGCTGAAGACAGCCAGCAGCCGCCTCCAAG...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCGCCCCAGTTGGTGCCTaGCTGAGCAGTCAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPAPVGA*LSSQSE
Trigger: CTCAGACTGACTGCTCAGCCAGGCACCAACTGGGGC...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCTCATGCCCCAGTTGGTaGCTGGCTGAGCAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPSCPSW*LAEQSV
Trigger: GACTGACTGCTCAGCCAGGCACCAACTGGGGCATGA...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCTGCAGGTCCTGTTCATaGCCCAGTTGGTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPCRSCS*PSWCLA
Trigger: AGCCAGGCACCAACTGGGGCATGAACAGGACCTGCA...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCCCGTCACGACCCAGATaGACAGTACAGAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPPSRPR*TVQRPG
Trigger: CCCTGGTCTCTGTACTGTCCATCTGGGTCGTGACGG...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGGCAGTATGGGCGCGCTaGGGCCAGCCTCCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: LLPPWARTVKTNSALPLGAVWAR*GQPPLG
Trigger: TCCAAGGGGAGGCTGGCCCCAGCGCGCCCATACTGC...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCATGTCAGGCTCCGACTaGGTCAGGCCAGGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPMSGSD*VRPGRQ
Trigger: TTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACAT...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp AGCAGGGTCACACTAGCTTTATACCCGCTGAGTCCCCACCCTGGCTGTAGTCAGCCGCCGAGTGCGCCCTaGAAGTTGCGCGCGGGACTC +
Preference number: 4 (lower is better)
Translates to: SRVTLALYPLSPHPGCSQPPSAP*KLRAGL
Trigger: GAGTCCCGCGCGCAACTTTCAGGGCGCACTCGGCGG...CTGACTACAGCCAGGGTGGGGACTCAGCGGGTATAAAGCTAGTGTGACCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGTTGGTGGGGCCCTGGCATGCCTaGCAGTCCTTCATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LGDTQSSHLQVLFMPQLVGPWHA*QSFMSS
Trigger: GGAGGACATGAAGGACTGTCAGGCATGCCAGGGCCC...CACCAACTGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp GCCAGGCTGAGAATGGGGCATGAGGCAGGCAGTATGGGCGCGCTGGGGCCAGCCTCTTTCTGGAGACTCTaGATCCCCTGGGACACTCTC +
Preference number: 4 (lower is better)
Translates to: ARLRMGHEAGSMGALGPASFWRL*IPWDTL
Trigger: GAGAGTGTCCCAGGGGATTCAGAGTCTCCAGAAAGA...GGCTGGCCCCAGCGCGCCCATACTGCCTGCCTCATGCCCCATTCTCAGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp GTGACACAGGACTCCCTGATAACTGGGCATGTTGTCTCGATGAGTCGGGGACAGGGCTCCCGCTGCGGCTaGAGCTCCGGCTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: VTQDSLITGHVVSMSRGQGSRCG*SSGSGS
Trigger: GGAGCCAGAGCCGGAGCTGCAGCCGCAGCGGGAGCC...CTGTCCCCGACTCATCGAGACAACATGCCCAGTTATCAGGGAGTCCTGTGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGTTGGTGTCTCCTCCTGCTGGTTaGTGGTGCCGTGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LGDTQSSHLQVLFMPQLVSPPAG*WCRGCA
Trigger: GGCACAGCCACGGCACCACCAACCAGCAGGAGGAGA...CACCAACTGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGTCAGATGGGAGGCTaGGAAGAGCTCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPSQMGG*EELHSW
Trigger: CCAGGAATGGAGCTCTTCCCAGCCTCCCATCTGACT...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGTTGGTGCAGCCCTTCCAGAGCTaGCCCAGGAGCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LGDTQSSHLQVLFMPQLVQPFQS*PRSWKS
Trigger: GCTCTTCCAGCTCCTGGGCCAGCTCTGGAAGGGCTG...CACCAACTGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp GCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCACCATGGCCAGACTGGTaGAGGGTCAACCCCATTATG +
Preference number: 4 (lower is better)
Translates to: AGPGGHSVQPPAGPVHAPPWPDW*RVNPIM
Trigger: CATAATGGGGTTGACCCTTCACCAGTCTGGCCATGG...TGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CCTTTCCCTCCACCATGTCAGGCTCCGACTGGGTCAGGCCAGGTAGGCAACAGACGCCGATCACATGGATaGAGGCAGCTCGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: PFPPPCQAPTGSGQVGNRRRSHG*RQLGRW
Trigger: CCAGCGTCCGAGCTGCCTTCATCCATGTGATCGGCG...TCTGTTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACATGGTGGAGGGAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTCAGTTGGTGCCTGGCTaGGCAGTCAGTCTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSQLVPG*AVSLRG
Trigger: GCCCCTCAGACTGACTGCTCAGCCAGGCACCAACTG...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCTTGTTCTCAACCCTGTaGGGGAGGCATCAACCCTGT +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPLFSTL*GRHQPC
Trigger: ACAGGGTTGATGCCTCCCTCACAGGGTTGAGAACAA...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGGCCAGCTCAATGGCCTaGAAGTCCAGGCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: LLPPWARTVKTNSALPLGASSMA*KSRPGR
Trigger: CCGACCTGGCCTGGACTTGCAGGCCATTGAGCTGGC...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTCTGGGGTTCTCCTCCTaGTGGTTGGTGGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSLGFSS*WLVVPW
Trigger: CCACGGCACCACCAACCAGCAGGAGGAGAACCCCAG...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp GCCAGGCTGAGAATGGGGCATGAGGCAGGCAGTATGGGCGCGCTGGGGCCAGCCAGGACACCCATGCTCTaGATAAAGTCGCCGATCACA +
Preference number: 4 (lower is better)
Translates to: ARLRMGHEAGSMGALGPARTPML*IKSPIT
Trigger: TGTGATCGGCGACTTTATGCAGAGCATGGGTGTCCT...GGCTGGCCCCAGCGCGCCCATACTGCCTGCCTCATGCCCCATTCTCAGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGTTGGTGTCCCTTGGAGGCGGCTaGTGGCTGTCTTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: LGDTQSSHLQVLFMPQLVSLGGG*WLSSAQ
Trigger: CTGTGCTGAAGACAGCCAGCAGCCGCCTCCAAGGGA...CACCAACTGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGGGCCTCTGGACCGAGTaGAGCCCCACTTGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLPPWARTVKTNSALPLGGLWTE*SPTCLP
Trigger: AGGGAGACAAGTGGGGCTGCACTCGGTCCAGAGGCC...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGTTGGTGGAGGCTACATACAGCTaGCGCTGGGCCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LGDTQSSHLQVLFMPQLVEATYS*RWAFPF
Trigger: GAAGGGGAAGGCCCAGCGCCAGCTGTATGTAGCCTC...CACCAACTGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTCCTCCTGCTGGTTGGTaGTGCCGTGGCTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSPPAGW*CRGCAH
Trigger: ATGGGCACAGCCACGGCACCACCAACCAGCAGGAGG...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGGGGTTCTCCTCCTGCTaGTTGGTGGTGCCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLPPWARTVKTNSALPLGGFSSC*LVVPWL
Trigger: CAGCCACGGCACCACCAACCAGCAGGAGGAGAACCC...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCGCAGTATGGGCGCGCTaGGGCCAGCCTCCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGAVWAR*GQPPLG
Trigger: TCCAAGGGGAGGCTGGCCCCAGCGCGCCCATACTGC...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp AGCAGGGTCACACTAGCTTTATACCCGCTGAGTCCCCACCCTGGCTGTAGTCAGGCCTCAGGTGCCTCCTaGCTCCCTGCCTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SRVTLALYPLSPHPGCSQASGAS*LPASGR
Trigger: CCTCCCTGAGGCAGGGAGCCAGGAGGCACCTGAGGC...CTGACTACAGCCAGGGTGGGGACTCAGCGGGTATAAAGCTAGTGTGACCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGTTGGTGGGTTTCCCTCCTAGCTaGCCTCTGGACCGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LGDTQSSHLQVLFMPQLVGFPPS*PLDRVQ
Trigger: CTGCACTCGGTCCAGAGGCCAGCTAGGAGGGAAACC...CACCAACTGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAAGGGGTGTAAGGACTTaGCATACGGCAAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AGPGGHSVQPPAGPVHAPRGVRT*HTAKPR
Trigger: CCTGGGCTTTGCCGTATGCCAAGTCCTTACACCCCT...TGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CAACAGAGTTGGCCCAGCCATATCTTTCTGGAGACTCTGAATCCCCTGGGACACCCGCCGAGTGCGCCCTaGAAGTTGCGCGCGGGACTC +
Preference number: 4 (lower is better)
Translates to: QQSWPSHIFLETLNPLGHPPSAP*KLRAGL
Trigger: GAGTCCCGCGCGCAACTTTCAGGGCGCACTCGGCGG...GTGTCCCAGGGGATTCAGAGTCTCCAGAAAGATATGGCTGGGCCAACTCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CCTTTCCCTCCACCATGTCAGGCTCCGACTGGGTCAGGCCAGGTAGGCAACAGAGCTCAAATGAGAGTGTaGGGGTCCTCACCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: PFPPPCQAPTGSGQVGNRAQMRV*GSSPPC
Trigger: GCACGGGGGTGAGGACCCTCACACTCTCATTTGAGC...TCTGTTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACATGGTGGAGGGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CCTTTCCCTCCACCATGTCAGGCTCCGACTGGGTCAGGCCAGGTAGGCAACAGACTGTCGGTGTACAGATaGGACTGTGGGGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PFPPPCQAPTGSGQVGNRLSVYR*DCGAEA
Trigger: GGCCTCTGCCCCACAGTCTCATCTGTACACCGACAG...TCTGTTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACATGGTGGAGGGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCACCCCTAAGTCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCTCCTTGGCCTCCATaGAGTCCCGCGCCGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PPLSQESSHTSPRKLRFPSPWPP*SPAPSP
Trigger: GGGACTCGGCGCGGGACTGCATGGAGGCCAAGGAGA...GGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGACTTAGGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGTTGGTGCTGGCGTCCAACAGATaGTGCTTCTCCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LGDTQSSHLQVLFMPQLVLASNR*CFSLAS
Trigger: GGAGGCCAAGGAGAAGCAGCATCTGTTGGACGCCAG...CACCAACTGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCTTTCCCTCCACCATGTCAGGCTCCGACTGGGTCAGGCCAGGTAGGCAACAGACTGGGCCACCGTCAGTaGCCAGATATGCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PFPPPCQAPTGSGQVGNRLGHRQ*PDMQAV
Trigger: CACAGCCTGCATATCTGGGCACTGACGGTGGCCCAG...TCTGTTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACATGGTGGAGGGAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCTTTCCCTCCACCATGTCAGGCTCCGACTGGGTCAGGCCAGGTAGGCAACAGATGCCTCCTGGCTCCCTaGCTCAGGGAGGCTCAAATG +
Preference number: 4 (lower is better)
Translates to: PFPPPCQAPTGSGQVGNRCLLAP*LREAQM
Trigger: CATTTGAGCCTCCCTGAGGCAGGGAGCCAGGAGGCA...TCTGTTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACATGGTGGAGGGAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGTTGGTGGACAGCCAAGCTGTGTaGCAGGTACCCACCAACGAC +
Preference number: 4 (lower is better)
Translates to: LGDTQSSHLQVLFMPQLVDSQAV*QVPTND
Trigger: GTCGTTGGTGGGTACCTGGCACACAGCTTGGCTGTC...CACCAACTGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374276.4
CDS-3UTR CCA 90 bp CCTTTCCCTCCACCATGTCAGGCTCCGACTGGGTCAGGCCAGGTAGGCAACAGAACATACAGCTGGCGCTaGGCCTTCCCCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PFPPPCQAPTGSGQVGNRTYSWR*AFPFLG
Trigger: CCCCAAGAAGGGGAAGGCCCAGCGCCAGCTGTATGT...TCTGTTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACATGGTGGAGGGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCTCACATCTCTCAGGATaGTCAAGGTTGTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPSHLSG*SRLSPG
Trigger: TCCTGGGGACAACCTTGACCATCCTGAGAGATGTGA...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGACAGACAGAACAGGCTaGGCCACCGTCAGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LLPPWARTVKTNSALPLGTDRTG*ATVSAQ
Trigger: CTGGGCACTGACGGTGGCCCAGCCTGTTCTGTCTGT...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGTTGGTGGTCAGGAGGGGGACCTaGTTTACAACACAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LGDTQSSHLQVLFMPQLVVRRGT*FTTQLG
Trigger: CCCCAGCTGTGTTGTAAACCAGGTCCCCCTCCTGAC...CACCAACTGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GTGACACAGGACTCCCTGATAACTGGGCATGTTGTCTCGATGAGTCGGGGACAGGCCTCAGGTGCCTCCTaGCTCCCTGCCTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VTQDSLITGHVVSMSRGQASGAS*LPASGR
Trigger: CCTCCCTGAGGCAGGGAGCCAGGAGGCACCTGAGGC...CTGTCCCCGACTCATCGAGACAACATGCCCAGTTATCAGGGAGTCCTGTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GATGAGACTGTGGGGCAGAGGCCAGCTCGCCCAAGGCACTTGCTTACAATGGCACTCCTAGCTGGCCTCTaGACCGAGTGCAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: DETVGQRPARPRHLLTMALLAGL*TECSPT
Trigger: AGTGGGGCTGCACTCGGTCCAGAGGCCAGCTAGGAG...TGCCATTGTAAGCAAGTGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGTTGGTGGGGTCAACCCCATTATaGTGTTCACAGCCACAGCGC +
Preference number: 4 (lower is better)
Translates to: LGDTQSSHLQVLFMPQLVGSTPL*CSQPQR
Trigger: GCGCTGTGGCTGTGAACATCATAATGGGGTTGACCC...CACCAACTGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCGGGCCCTGGCATGCCTaGCAGTCCTTCATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGGPWHA*QSFMSS
Trigger: GGAGGACATGAAGGACTGTCAGGCATGCCAGGGCCC...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CCTTTCCCTCCACCATGTCAGGCTCCGACTGGGTCAGGCCAGGTAGGCAACAGAGGCATGTTGTCTCGATaGGTCGGGGACAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: PFPPPCQAPTGSGQVGNRGMLSR*VGDRFP
Trigger: GGGAAACCTGTCCCCGACTCATCGAGACAACATGCC...TCTGTTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACATGGTGGAGGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGTGCTGGCAAAGTCAGTaGGCAGGTGTGCTGCGTCAG +
Preference number: 4 (lower is better)
Translates to: LLPPWARTVKTNSALPLGCWQSQ*AGVLRQ
Trigger: CTGACGCAGCACACCTGCTCACTGACTTTGCCAGCA...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374276.4
CDS-3UTR GCA 90 bp CAACAGAGTTGGCCCAGCCATATCTTTCTGGAGACTCTGAATCCCCTGGGACACGTGCGCCCTGAAAGTTaGGCGCGGGACTCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: QQSWPSHIFLETLNPLGHVRPES*ARDSGW
Trigger: CCACCCGGAGTCCCGCGCGCAACTTTCAGGGCGCAC...GTGTCCCAGGGGATTCAGAGTCTCCAGAAAGATATGGCTGGGCCAACTCTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCACCTTTGCCCCTGCGAGTGGTAGAACATTTGCTGAGGATTAGGCCCAAATACAGCCGCCCCGCCGAGTaGGCCCTGAAAGTTGCGCGC +
Preference number: 4 (lower is better)
Translates to: PPLPLRVVEHLLRIRPKYSRPAE*ALKVAR
Trigger: GCGCGCAACTTTCAGGGCGCACTCGGCGGGGCGGCT...GTATTTGGGCCTAATCCTCAGCAAATGTTCTACCACTCGCAGGGGCAAAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCTGGAGAAGACGAAGGTaGAGATGGGGTCTACATACT +
Preference number: 4 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPWRRRR*RWGLHT
Trigger: AGTATGTAGACCCCATCTGCACCTTCGTCTTCTCCA...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp GATGAGACTGTGGGGCAGAGGCCAGCTCGCCCAAGGCACTTGCTTACAATGGCACTGGGCCACCGTCAGTaGCCAGATATGCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: DETVGQRPARPRHLLTMALGHRQ*PDMQAV
Trigger: CACAGCCTGCATATCTGGGCACTGACGGTGGCCCAG...TGCCATTGTAAGCAAGTGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCCAGATAGGCCTCAGGTaGCTCCTGGCTCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGQIGLR*LLAPCL
Trigger: GAGGCAGGGAGCCAGGAGGCACCTGAGGCCTATCTG...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGTTGGTGAATCTCTCTACCCCCTaGCCACCACCTGTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LGDTQSSHLQVLFMPQLVNLSTP*PPPVPK
Trigger: CTTTGGCACAGGTGGTGGGCAGGGGGTAGAGAGATT...CACCAACTGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTAGGCATGAGCCACCGTaGCCAGCCAATGACTGTCTC +
Preference number: 4 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSRHEPP*PANDCL
Trigger: GAGACAGTCATTGGCTGGGCACGGTGGCTCATGCCT...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCTTTCCCTCCACCATGTCAGGCTCCGACTGGGTCAGGCCAGGTAGGCAACAGACTCAAGTCATCTGCCTaGCTCAGCCTCCCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: PFPPPCQAPTGSGQVGNRLKSSA*LSLPRC
Trigger: GCACCTTGGGAGGCTGAGGCAGGCAGATGACTTGAG...TCTGTTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACATGGTGGAGGGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCTTTCCCTCCACCATGTCAGGCTCCGACTGGGTCAGGCCAGGTAGGCAACAGAGTGATCTCAGCTCACTaGAACCTCTGCCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: PFPPPCQAPTGSGQVGNRVISAH*NLCLPG
Trigger: ACCGGGGAGGCAGAGGTTGCAGTGAGCTGAGATCAC...TCTGTTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACATGGTGGAGGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GATGAGACTGTGGGGCAGAGGCCAGCTCGCCCAAGGCACTTGCTTACAATGGCAGATGCTGCTTCTCCTTaGCCTCCATGCAGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: DETVGQRPARPRHLLTMADAASP*PPCSPA
Trigger: CGCGGGACTGCATGGAGGCCAAGGAGAAGCAGCATC...TGCCATTGTAAGCAAGTGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCTGGTTGGTGGTGCCGTaGCTGTGCCCATGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGWLVVP*LCPWPD
Trigger: GTCTGGCCATGGGCACAGCCACGGCACCACCAACCA...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCACCCCTAAGTCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCTCCTCCTGCTGGTTaGTGGTGCCGTGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PPLSQESSHTSPRKLRFPSPPAG*WCRGCA
Trigger: GGCACAGCCACGGCACCACCAACCAGCAGGAGGAGA...GGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGACTTAGGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCAGGCAGCTCGGACGCTaGGGTTCTCCTCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGRQLGR*GSPPAG
Trigger: ACCAGCAGGAGGAGAACCCCAGCGTCCGAGCTGCCT...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTGAAGAGCTCCATTCCTaGAGTGGGGCAGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSEELHS*SGAEVR
Trigger: CCTGACCTCTGCCCCACTCCAGGAATGGAGCTCTTC...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp AGCAGGGTCACACTAGCTTTATACCCGCTGAGTCCCCACCCTGGCTGTAGTCAGCTCCTAGCTGGCCTCTaGACCGAGTGCAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: SRVTLALYPLSPHPGCSQLLAGL*TECSPT
Trigger: AGTGGGGCTGCACTCGGTCCAGAGGCCAGCTAGGAG...CTGACTACAGCCAGGGTGGGGACTCAGCGGGTATAAAGCTAGTGTGACCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCTTTCCCTCCACCATGTCAGGCTCCGACTGGGTCAGGCCAGGTAGGCAACAGACCCCTGAGATTGTGGTaGAATGGAGCACCCACCAGC +
Preference number: 4 (lower is better)
Translates to: PFPPPCQAPTGSGQVGNRPLRLW*NGAPTS
Trigger: GCTGGTGGGTGCTCCATTCCACCACAATCTCAGGGG...TCTGTTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACATGGTGGAGGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTAGTTCATGGTCTTGGTaGCTGGCCGGGAGGACATCC +
Preference number: 4 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSSSWSW*LAGRTS
Trigger: GGATGTCCTCCCGGCCAGCCACCAAGACCATGAACT...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374276.4
CDS-3UTR TCA 90 bp GATGAGACTGTGGGGCAGAGGCCAGCTCGCCCAAGGCACTTGCTTACAATGGCAGATCACGAACAGCTGTaGAGTCAACGCCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: DETVGQRPARPRHLLTMADHEQL*SQRPWG
Trigger: CCCCCAAGGGCGTTGACTTCACAGCTGTTCGTGATC...TGCCATTGTAAGCAAGTGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGTTGGTGTCTTTCTGGAGACTCTaGATCCCCTGGGACACTCTC +
Preference number: 4 (lower is better)
Translates to: LGDTQSSHLQVLFMPQLVSFWRL*IPWDTL
Trigger: GAGAGTGTCCCAGGGGATTCAGAGTCTCCAGAAAGA...CACCAACTGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCCTGTCGGTGTACAGATaGGACTGTGGGGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGLSVYR*DCGAEA
Trigger: GGCCTCTGCCCCACAGTCTCATCTGTACACCGACAG...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp GATGAGACTGTGGGGCAGAGGCCAGCTCGCCCAAGGCACTTGCTTACAATGGCAAAAGTGGGAGGCAAGTaGCCAAACCCACCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: DETVGQRPARPRHLLTMAKVGGK*PNPPPP
Trigger: GGGAGGAGGTGGGTTTGGTCACTTGCCTCCCACTTT...TGCCATTGTAAGCAAGTGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGGTCAGTGCCCAGATATaGAGGCTGTGCAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLPPWARTVKTNSALPLGVSAQI*RLCRAS
Trigger: AGAAGCCCTGCACAGCCTGCATATCTGGGCACTGAC...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCGATGCTGCTTCTCCTTaGCCTCCATGCAGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGDAASP*PPCSPA
Trigger: CGCGGGACTGCATGGAGGCCAAGGAGAAGCAGCATC...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp AGCAGGGTCACACTAGCTTTATACCCGCTGAGTCCCCACCCTGGCTGTAGTCAGACCGGATTGCCGGCCTaGCGTCCAACAGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: SRVTLALYPLSPHPGCSQTGLPA*RPTDAA
Trigger: AGCAGCATCTGTTGGACGCCAGGCCGGCAATCCGGT...CTGACTACAGCCAGGGTGGGGACTCAGCGGGTATAAAGCTAGTGTGACCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCACATACAGCTGGCGCTaGGCCTTCCCCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGTYSWR*AFPFLG
Trigger: CCCCAAGAAGGGGAAGGCCCAGCGCCAGCTGTATGT...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCACCCCTAAGTCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCCTTGGAGGCGGCTGCTaGCTGTCTTCAGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: PPLSQESSHTSPRKLRFPLGGGC*LSSAQP
Trigger: AGGCTGTGCTGAAGACAGCCAGCAGCCGCCTCCAAG...GGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGACTTAGGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCACCCCTAAGTCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCGCCCCAGTTGGTGCCTaGCTGAGCAGTCAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: PPLSQESSHTSPRKLRFPAPVGA*LSSQSE
Trigger: CTCAGACTGACTGCTCAGCCAGGCACCAACTGGGGC...GGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGACTTAGGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTCACCTCCTCCCACCTTaGGCCAGAACAGTCAAGACA +
Preference number: 4 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSHLLPP*ARTVKT
Trigger: TGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAGGTG...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGGAGATTGTGGTGGAATaGAGCACCCACCAGCAACCC +
Preference number: 4 (lower is better)
Translates to: LLPPWARTVKTNSALPLGEIVVE*STHQQP
Trigger: GGGTTGCTGGTGGGTGCTCCATTCCACCACAATCTC...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGAGTCCCCTGAGATTGTaGTGGAATGGAGCACCCACC +
Preference number: 4 (lower is better)
Translates to: LLPPWARTVKTNSALPLGSPLRL*WNGAPT
Trigger: GGTGGGTGCTCCATTCCACCACAATCTCAGGGGACT...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTCTGGTCTCGAACTCCTaGCCTCAAGTCATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSLVSNS*PQVICL
Trigger: CAGGCAGATGACTTGAGGCCAGGAGTTCGAGACCAG...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCACCCCTAAGTCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCCATGGTCTTGGTGGCTaGCCGGGAGGACATCCAGAG +
Preference number: 4 (lower is better)
Translates to: PPLSQESSHTSPRKLRFPHGLGG*PGGHPE
Trigger: CTCTGGATGTCCTCCCGGCCAGCCACCAAGACCATG...GGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGACTTAGGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374276.4
CDS-3UTR TCA 90 bp CGTGCCTATTGCTATAGGCAGATGGAGGGGCTCAGATTCATAAAGGCAAAGGCCGCTGAGCAGTCAGTCTaGGGGGCCCTGGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: RAYCYRQMEGLRFIKAKAAEQSV*GALACL
Trigger: CAGGCATGCCAGGGCCCCTCAGACTGACTGCTCAGC...GGCCTTTGCCTTTATGAATCTGAGCCCCTCCATCTGCCTATAGCAATAGGCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CGTGCCTATTGCTATAGGCAGATGGAGGGGCTCAGATTCATAAAGGCAAAGGCCGCTGGGAAGCCCACCTaGCTCCTCAGTGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RAYCYRQMEGLRFIKAKAAGKPT*LLSEAA
Trigger: GGCTGCCTCACTGAGGAGTCAGGTGGGCTTCCCAGC...GGCCTTTGCCTTTATGAATCTGAGCCCCTCCATCTGCCTATAGCAATAGGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CCACCCCTAAGTCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCAAAGTGGGAGGCAAGTaGCCAAACCCACCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PPLSQESSHTSPRKLRFPKVGGK*PNPPPP
Trigger: GGGAGGAGGTGGGTTTGGTCACTTGCCTCCCACTTT...GGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGACTTAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp AGCAGGGTCACACTAGCTTTATACCCGCTGAGTCCCCACCCTGGCTGTAGTCAGGTGCTGCGTCAGTCATaGCAGCCAAGCTGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: SRVTLALYPLSPHPGCSQVLRQS*QPSCVP
Trigger: TGGCACACAGCTTGGCTGTCATGACTGACGCAGCAC...CTGACTACAGCCAGGGTGGGGACTCAGCGGGTATAAAGCTAGTGTGACCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374276.4
CDS-3UTR GCA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCCTGGCGTCCAACAGATaGTGCTTCTCCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGLASNR*CFSLAS
Trigger: GGAGGCCAAGGAGAAGCAGCATCTGTTGGACGCCAG...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCACCCCTAAGTCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCCAGATATGCAGGCTGTaGAGGGCTTCTACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PPLSQESSHTSPRKLRFPQICRL*RASTPS
Trigger: GGAGGGGGTAGAAGCCCTGCACAGCCTGCATATCTG...GGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGACTTAGGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCTCATGCCCCAGTTGGTaGCTGGCTGAGCAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGSCPSW*LAEQSV
Trigger: GACTGACTGCTCAGCCAGGCACCAACTGGGGCATGA...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp AGCAGGGTCACACTAGCTTTATACCCGCTGAGTCCCCACCCTGGCTGTAGTCAGCTCAAGTCATCTGCCTaGCTCAGCCTCCCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: SRVTLALYPLSPHPGCSQLKSSA*LSLPRC
Trigger: GCACCTTGGGAGGCTGAGGCAGGCAGATGACTTGAG...CTGACTACAGCCAGGGTGGGGACTCAGCGGGTATAAAGCTAGTGTGACCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCGGGCCTTCCCCTTCTTaGGGTCACAGTGACTGTCAG +
Preference number: 4 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGGPSPS*GHSDCQ
Trigger: CTGACAGTCACTGTGACCCCAAGAAGGGGAAGGCCC...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GTGACACAGGACTCCCTGATAACTGGGCATGTTGTCTCGATGAGTCGGGGACAGGAGGCTACATACAGCTaGCGCTGGGCCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VTQDSLITGHVVSMSRGQEATYS*RWAFPF
Trigger: GAAGGGGAAGGCCCAGCGCCAGCTGTATGTAGCCTC...CTGTCCCCGACTCATCGAGACAACATGCCCAGTTATCAGGGAGTCCTGTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GATGAGACTGTGGGGCAGAGGCCAGCTCGCCCAAGGCACTTGCTTACAATGGCAAGTCAGATGGGAGGCTaGGAAGAGCTCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: DETVGQRPARPRHLLTMASQMGG*EELHSW
Trigger: CCAGGAATGGAGCTCTTCCCAGCCTCCCATCTGACT...TGCCATTGTAAGCAAGTGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GATGAGACTGTGGGGCAGAGGCCAGCTCGCCCAAGGCACTTGCTTACAATGGCAAAGTGCCAGGGGGCTTaGAGGCTGTTAGTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: DETVGQRPARPRHLLTMAKCQGA*RLLVQN
Trigger: GTTCTGCACTAACAGCCTCCAAGCCCCCTGGCACTT...TGCCATTGTAAGCAAGTGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCACCCCTAAGTCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCATGTCAGGCTCCGACTaGGTCAGGCCAGGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: PPLSQESSHTSPRKLRFPMSGSD*VRPGRQ
Trigger: TTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACAT...GGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGACTTAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR CAA 72 bp GAGACTGTGGGGCAGAGGCCAGCTCGCCCAAGGCACTaGCTTACAATGGCAGAGACAGACCTTGTGACACAG +
Preference number: 4 (lower is better)
Translates to: ETVGQRPARPRH*LTMAETDLVTQ
Trigger: CTGTGTCACAAGGTCTGTCTCTGCCATTGTAAGCAAGTGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp AGCAGGGTCACACTAGCTTTATACCCGCTGAGTCCCCACCCTGGCTGTAGTCAGGTGCAGAACCCAAGCTaGAATCTCTCTACCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SRVTLALYPLSPHPGCSQVQNPS*NLSTPC
Trigger: GCAGGGGGTAGAGAGATTTCAGCTTGGGTTCTGCAC...CTGACTACAGCCAGGGTGGGGACTCAGCGGGTATAAAGCTAGTGTGACCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CCTTTCCCTCCACCATGTCAGGCTCCGACTGGGTCAGGCCAGGTAGGCAACAGACCAATGACTGTCTCTTaGGAGGGGTGTAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: PFPPPCQAPTGSGQVGNRPMTVS*EGCKDL
Trigger: CAAGTCCTTACACCCCTCTCAAGAGACAGTCATTGG...TCTGTTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACATGGTGGAGGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGAGGACACCCATGCTCTaGATAAAGTCGCCGATCACA +
Preference number: 4 (lower is better)
Translates to: LLPPWARTVKTNSALPLGRTPML*IKSPIT
Trigger: TGTGATCGGCGACTTTATGCAGAGCATGGGTGTCCT...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCGTCAGTGCCCAGATATaGAGGCTGTGCAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGVSAQI*RLCRAS
Trigger: AGAAGCCCTGCACAGCCTGCATATCTGGGCACTGAC...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CAACAGAGTTGGCCCAGCCATATCTTTCTGGAGACTCTGAATCCCCTGGGACACTGCCTCCTGGCTCCCTaGCTCAGGGAGGCTCAAATG +
Preference number: 4 (lower is better)
Translates to: QQSWPSHIFLETLNPLGHCLLAP*LREAQM
Trigger: CATTTGAGCCTCCCTGAGGCAGGGAGCCAGGAGGCA...GTGTCCCAGGGGATTCAGAGTCTCCAGAAAGATATGGCTGGGCCAACTCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCACCTTTGCCCCTGCGAGTGGTAGAACATTTGCTGAGGATTAGGCCCAAATACCAGATAGGCCTCAGGTaGCTCCTGGCTCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PPLPLRVVEHLLRIRPKYQIGLR*LLAPCL
Trigger: GAGGCAGGGAGCCAGGAGGCACCTGAGGCCTATCTG...GTATTTGGGCCTAATCCTCAGCAAATGTTCTACCACTCGCAGGGGCAAAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp AGCAGGGTCACACTAGCTTTATACCCGCTGAGTCCCCACCCTGGCTGTAGTCAGGTCAGTGAGCAGGTGTaGTGCGTCAGTCATGACAGC +
Preference number: 4 (lower is better)
Translates to: SRVTLALYPLSPHPGCSQVSEQV*CVSHDS
Trigger: GCTGTCATGACTGACGCAGCACACCTGCTCACTGAC...CTGACTACAGCCAGGGTGGGGACTCAGCGGGTATAAAGCTAGTGTGACCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374276.4
CDS-3UTR CCA 90 bp GTGACACAGGACTCCCTGATAACTGGGCATGTTGTCTCGATGAGTCGGGGACAGCCGTCACGACCCAGATaGACAGTACAGAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: VTQDSLITGHVVSMSRGQPSRPR*TVQRPG
Trigger: CCCTGGTCTCTGTACTGTCCATCTGGGTCGTGACGG...CTGTCCCCGACTCATCGAGACAACATGCCCAGTTATCAGGGAGTCCTGTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCACCTTTGCCCCTGCGAGTGGTAGAACATTTGCTGAGGATTAGGCCCAAATACCCTCCTGCTGGTTGGTaGTGCCGTGGCTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: PPLPLRVVEHLLRIRPKYPPAGW*CRGCAH
Trigger: ATGGGCACAGCCACGGCACCACCAACCAGCAGGAGG...GTATTTGGGCCTAATCCTCAGCAAATGTTCTACCACTCGCAGGGGCAAAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CGTGCCTATTGCTATAGGCAGATGGAGGGGCTCAGATTCATAAAGGCAAAGGCCGGGTTCTCCTCCTGCTaGTTGGTGGTGCCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RAYCYRQMEGLRFIKAKAGFSSC*LVVPWL
Trigger: CAGCCACGGCACCACCAACCAGCAGGAGGAGAACCC...GGCCTTTGCCTTTATGAATCTGAGCCCCTCCATCTGCCTATAGCAATAGGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCACCCCTAAGTCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCAAGTCGCCGATCACATaGATGAAGGCAGCTCGGACG +
Preference number: 4 (lower is better)
Translates to: PPLSQESSHTSPRKLRFPKSPIT*MKAART
Trigger: CGTCCGAGCTGCCTTCATCCATGTGATCGGCGACTT...GGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGACTTAGGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GATGAGACTGTGGGGCAGAGGCCAGCTCGCCCAAGGCACTTGCTTACAATGGCATGGATGGTCACGGTGTaGAAGTGGAACTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: DETVGQRPARPRHLLTMAWMVTV*KWNFPW
Trigger: CCAAGGGAAGTTCCACTTCCACACCGTGACCATCCA...TGCCATTGTAAGCAAGTGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GTGACACAGGACTCCCTGATAACTGGGCATGTTGTCTCGATGAGTCGGGGACAGGTCAGGAGGGGGACCTaGTTTACAACACAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VTQDSLITGHVVSMSRGQVRRGT*FTTQLG
Trigger: CCCCAGCTGTGTTGTAAACCAGGTCCCCCTCCTGAC...CTGTCCCCGACTCATCGAGACAACATGCCCAGTTATCAGGGAGTCCTGTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTGGACTCCCTGATAACTaGGCATGTTGTCTCGATGAG +
Preference number: 4 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSGLPDN*ACCLDE
Trigger: CTCATCGAGACAACATGCCCAGTTATCAGGGAGTCC...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGGGACTCCCTGATAACTaGGCATGTTGTCTCGATGAG +
Preference number: 4 (lower is better)
Translates to: LLPPWARTVKTNSALPLGGLPDN*ACCLDE
Trigger: CTCATCGAGACAACATGCCCAGTTATCAGGGAGTCC...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTAGGTACTTGGCCAACTaGCTCTTGTTCTCAACCCTG +
Preference number: 4 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSRYLAN*LLFSTL
Trigger: CAGGGTTGAGAACAAGAGCCAGTTGGCCAAGTACCT...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGAGGTACTTGGCCAACTaGCTCTTGTTCTCAACCCTG +
Preference number: 4 (lower is better)
Translates to: LLPPWARTVKTNSALPLGRYLAN*LLFSTL
Trigger: CAGGGTTGAGAACAAGAGCCAGTTGGCCAAGTACCT...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCACCCCTAAGTCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCCACCTCCTCCCACCTTaGGCCAGAACAGTCAAGACA +
Preference number: 4 (lower is better)
Translates to: PPLSQESSHTSPRKLRFPHLLPP*ARTVKT
Trigger: TGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAGGTG...GGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGACTTAGGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCAGGGGTGTAAGGACTTaGCATACGGCAAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGRGVRT*HTAKPR
Trigger: CCTGGGCTTTGCCGTATGCCAAGTCCTTACACCCCT...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCCAAAGTTCATGGTCTTaGTGGCTGGCCGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGQSSWS*WLAGRT
Trigger: TGTCCTCCCGGCCAGCCACCAAGACCATGAACTTTG...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374276.4
CDS-3UTR TCA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCCGACTTCTCCGATCATaGACAACAGGCAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGRLLRS*TTGRWQ
Trigger: CTGCCATCTGCCTGTTGTTCATGATCGGAGAAGTCG...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGTTGGTGTTGTGTTGGCACAGCTaGGGAAATAAGGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LGDTQSSHLQVLFMPQLVLCWHS*GNKERG
Trigger: TCCTCTTTCCTTATTTCCTCAGCTGTGCCAACACAA...CACCAACTGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp AGCAGGGTCACACTAGCTTTATACCCGCTGAGTCCCCACCCTGGCTGTAGTCAGTTGTTCTCAACCCTGTaGGGGAGGCATCAACCCTGT +
Preference number: 4 (lower is better)
Translates to: SRVTLALYPLSPHPGCSQLFSTL*GRHQPC
Trigger: ACAGGGTTGATGCCTCCCTCACAGGGTTGAGAACAA...CTGACTACAGCCAGGGTGGGGACTCAGCGGGTATAAAGCTAGTGTGACCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCTGTCCCCAGGATGGTAAAAGTAACCAATCTTCAACAACCACAGGTACTTGGCTCTCCTTGGCCTCCATaGAGTCCCGCGCCGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PVPRMVKVTNLQQPQVLGSPWPP*SPAPSP
Trigger: GGGACTCGGCGCGGGACTGCATGGAGGCCAAGGAGA...GCCAAGTACCTGTGGTTGTTGAAGATTGGTTACTTTTACCATCCTGGGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CGTGCCTATTGCTATAGGCAGATGGAGGGGCTCAGATTCATAAAGGCAAAGGCCCTCAGTCCAGCCACCTaGAGGTCCTGTTCATGCCCC +
Preference number: 4 (lower is better)
Translates to: RAYCYRQMEGLRFIKAKALSPAT*RSCSCP
Trigger: GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAG...GGCCTTTGCCTTTATGAATCTGAGCCCCTCCATCTGCCTATAGCAATAGGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCACCTTTGCCCCTGCGAGTGGTAGAACATTTGCTGAGGATTAGGCCCAAATACCTCAGTCCAGCCACCTaGAGGTCCTGTTCATGCCCC +
Preference number: 4 (lower is better)
Translates to: PPLPLRVVEHLLRIRPKYLSPAT*RSCSCP
Trigger: GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAG...GTATTTGGGCCTAATCCTCAGCAAATGTTCTACCACTCGCAGGGGCAAAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp GTGACACAGGACTCCCTGATAACTGGGCATGTTGTCTCGATGAGTCGGGGACAGAATCTCTCTACCCCCTaGCCACCACCTGTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: VTQDSLITGHVVSMSRGQNLSTP*PPPVPK
Trigger: CTTTGGCACAGGTGGTGGGCAGGGGGTAGAGAGATT...CTGTCCCCGACTCATCGAGACAACATGCCCAGTTATCAGGGAGTCCTGTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCACCCCTAAGTCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCCCCTCTCCAGGCCAGTaGTTTCCACAGACTTTTCAC +
Preference number: 4 (lower is better)
Translates to: PPLSQESSHTSPRKLRFPPSPGQ*FPQTFH
Trigger: GTGAAAAGTCTGTGGAAAGCACTGGCCTGGAGAGGG...GGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGACTTAGGGGTGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp AGCAGGGTCACACTAGCTTTATACCCGCTGAGTCCCCACCCTGGCTGTAGTCAGAGTCCTCGATCTGGATaGTCACGGTGTGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: SRVTLALYPLSPHPGCSQSPRSG*SRCGSG
Trigger: TCCACTTCCACACCGTGACCATCCAGATCGAGGACT...CTGACTACAGCCAGGGTGGGGACTCAGCGGGTATAAAGCTAGTGTGACCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CAACAGAGTTGGCCCAGCCATATCTTTCTGGAGACTCTGAATCCCCTGGGACACGAAGAGCTCCATTCCTaGAGTGGGGCAGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QQSWPSHIFLETLNPLGHEELHS*SGAEVR
Trigger: CCTGACCTCTGCCCCACTCCAGGAATGGAGCTCTTC...GTGTCCCAGGGGATTCAGAGTCTCCAGAAAGATATGGCTGGGCCAACTCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GTGACACAGGACTCCCTGATAACTGGGCATGTTGTCTCGATGAGTCGGGGACAGAAGTGCCAGGGGGCTTaGAGGCTGTTAGTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: VTQDSLITGHVVSMSRGQKCQGA*RLLVQN
Trigger: GTTCTGCACTAACAGCCTCCAAGCCCCCTGGCACTT...CTGTCCCCGACTCATCGAGACAACATGCCCAGTTATCAGGGAGTCCTGTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CGTGCCTATTGCTATAGGCAGATGGAGGGGCTCAGATTCATAAAGGCAAAGGCCGGTTTCCCTCCTAGCTaGCCTCTGGACCGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: RAYCYRQMEGLRFIKAKAGFPPS*PLDRVQ
Trigger: CTGCACTCGGTCCAGAGGCCAGCTAGGAGGGAAACC...GGCCTTTGCCTTTATGAATCTGAGCCCCTCCATCTGCCTATAGCAATAGGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CGTGCCTATTGCTATAGGCAGATGGAGGGGCTCAGATTCATAAAGGCAAAGGCCGTACAGATGAGACTGTaGGGCAGAGGCCAGCTCGCC +
Preference number: 4 (lower is better)
Translates to: RAYCYRQMEGLRFIKAKAVQMRL*GRGQLA
Trigger: GGCGAGCTGGCCTCTGCCCCACAGTCTCATCTGTAC...GGCCTTTGCCTTTATGAATCTGAGCCCCTCCATCTGCCTATAGCAATAGGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGTTGGTGGACAGAGATTTAAAGTaGGAGGCAAGTGACCAAACC +
Preference number: 4 (lower is better)
Translates to: LGDTQSSHLQVLFMPQLVDRDLK*EASDQT
Trigger: GGTTTGGTCACTTGCCTCCCACTTTAAATCTCTGTC...CACCAACTGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GTGACACAGGACTCCCTGATAACTGGGCATGTTGTCTCGATGAGTCGGGGACAGAGTCCCCTGAGATTGTaGTGGAATGGAGCACCCACC +
Preference number: 4 (lower is better)
Translates to: VTQDSLITGHVVSMSRGQSPLRL*WNGAPT
Trigger: GGTGGGTGCTCCATTCCACCACAATCTCAGGGGACT...CTGTCCCCGACTCATCGAGACAACATGCCCAGTTATCAGGGAGTCCTGTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp GTGACACAGGACTCCCTGATAACTGGGCATGTTGTCTCGATGAGTCGGGGACAGCGACTTCTCCGATCATaGACAACAGGCAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: VTQDSLITGHVVSMSRGQRLLRS*TTGRWQ
Trigger: CTGCCATCTGCCTGTTGTTCATGATCGGAGAAGTCG...CTGTCCCCGACTCATCGAGACAACATGCCCAGTTATCAGGGAGTCCTGTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CGTGCCTATTGCTATAGGCAGATGGAGGGGCTCAGATTCATAAAGGCAAAGGCCGATCACGAACAGCTGTaGAGTCAACGCCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: RAYCYRQMEGLRFIKAKADHEQL*SQRPWG
Trigger: CCCCCAAGGGCGTTGACTTCACAGCTGTTCGTGATC...GGCCTTTGCCTTTATGAATCTGAGCCCCTCCATCTGCCTATAGCAATAGGCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CGTGCCTATTGCTATAGGCAGATGGAGGGGCTCAGATTCATAAAGGCAAAGGCCGGCATGTTGTCTCGATaGGTCGGGGACAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: RAYCYRQMEGLRFIKAKAGMLSR*VGDRFP
Trigger: GGGAAACCTGTCCCCGACTCATCGAGACAACATGCC...GGCCTTTGCCTTTATGAATCTGAGCCCCTCCATCTGCCTATAGCAATAGGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CGTGCCTATTGCTATAGGCAGATGGAGGGGCTCAGATTCATAAAGGCAAAGGCCCAGATATGCAGGCTGTaGAGGGCTTCTACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RAYCYRQMEGLRFIKAKAQICRL*RASTPS
Trigger: GGAGGGGGTAGAAGCCCTGCACAGCCTGCATATCTG...GGCCTTTGCCTTTATGAATCTGAGCCCCTCCATCTGCCTATAGCAATAGGCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CGTGCCTATTGCTATAGGCAGATGGAGGGGCTCAGATTCATAAAGGCAAAGGCCAGGCATGAGCCACCGTaGCCAGCCAATGACTGTCTC +
Preference number: 4 (lower is better)
Translates to: RAYCYRQMEGLRFIKAKARHEPP*PANDCL
Trigger: GAGACAGTCATTGGCTGGGCACGGTGGCTCATGCCT...GGCCTTTGCCTTTATGAATCTGAGCCCCTCCATCTGCCTATAGCAATAGGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp GTGACACAGGACTCCCTGATAACTGGGCATGTTGTCTCGATGAGTCGGGGACAGAGTGAGCAGGTGTGCTaGGTCAGTCATGACAGCCAA +
Preference number: 4 (lower is better)
Translates to: VTQDSLITGHVVSMSRGQSEQVC*VSHDSQ
Trigger: TTGGCTGTCATGACTGACGCAGCACACCTGCTCACT...CTGTCCCCGACTCATCGAGACAACATGCCCAGTTATCAGGGAGTCCTGTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374276.4
CDS-3UTR CCA 90 bp CCACCCCTAAGTCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCACATCTCTCAGGATaGTCAAGGTTGTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PPLSQESSHTSPRKLRFPSHLSG*SRLSPG
Trigger: TCCTGGGGACAACCTTGACCATCCTGAGAGATGTGA...GGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGACTTAGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCACCTTTGCCCCTGCGAGTGGTAGAACATTTGCTGAGGATTAGGCCCAAATACGTCACGGTGTGGAAGTaGAACTTCCCTTGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PPLPLRVVEHLLRIRPKYVTVWK*NFPWRR
Trigger: CCGCCTCCAAGGGAAGTTCCACTTCCACACCGTGAC...GTATTTGGGCCTAATCCTCAGCAAATGTTCTACCACTCGCAGGGGCAAAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CGTGCCTATTGCTATAGGCAGATGGAGGGGCTCAGATTCATAAAGGCAAAGGCCGTCACGGTGTGGAAGTaGAACTTCCCTTGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RAYCYRQMEGLRFIKAKAVTVWK*NFPWRR
Trigger: CCGCCTCCAAGGGAAGTTCCACTTCCACACCGTGAC...GGCCTTTGCCTTTATGAATCTGAGCCCCTCCATCTGCCTATAGCAATAGGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CAACAGAGTTGGCCCAGCCATATCTTTCTGGAGACTCTGAATCCCCTGGGACACTGTTCATGCCCCAGTTaGTGCCTGGCTGAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: QQSWPSHIFLETLNPLGHCSCPS*CLAEQS
Trigger: TGACTGCTCAGCCAGGCACCAACTGGGGCATGAACA...GTGTCCCAGGGGATTCAGAGTCTCCAGAAAGATATGGCTGGGCCAACTCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CAACAGAGTTGGCCCAGCCATATCTTTCTGGAGACTCTGAATCCCCTGGGACACCTGGTCTCGAACTCCTaGCCTCAAGTCATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: QQSWPSHIFLETLNPLGHLVSNS*PQVICL
Trigger: CAGGCAGATGACTTGAGGCCAGGAGTTCGAGACCAG...GTGTCCCAGGGGATTCAGAGTCTCCAGAAAGATATGGCTGGGCCAACTCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
3UTR CAA 72 bp GGCTCACCACCTTTGCCCCTGCGAGTGGTAGAACATTaGCTGAGGATTAGGCCCAAATACAGCCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GSPPLPLRVVEH*LRIRPKYSPSR
Trigger: TCTGGAAGGGCTGTATTTGGGCCTAATCCTCAGCAAATGTTCTACCACTCGCAGGGGCAAAGGTGGTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CCACCTTTGCCCCTGCGAGTGGTAGAACATTTGCTGAGGATTAGGCCCAAATACCCATGGCCAGACTGGTaGAGGGTCAACCCCATTATG +
Preference number: 4 (lower is better)
Translates to: PPLPLRVVEHLLRIRPKYPWPDW*RVNPIM
Trigger: CATAATGGGGTTGACCCTTCACCAGTCTGGCCATGG...GTATTTGGGCCTAATCCTCAGCAAATGTTCTACCACTCGCAGGGGCAAAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCACCTTTGCCCCTGCGAGTGGTAGAACATTTGCTGAGGATTAGGCCCAAATACCATGGCAGTGATGGTTaGTCTGGGCAGCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: PPLPLRVVEHLLRIRPKYHGSDG*SGQPAQ
Trigger: TTGAGCTGGCTGCCCAGAGCAACCATCACTGCCATG...GTATTTGGGCCTAATCCTCAGCAAATGTTCTACCACTCGCAGGGGCAAAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CAACAGAGTTGGCCCAGCCATATCTTTCTGGAGACTCTGAATCCCCTGGGACACCCCTCTCCAGGCCAGTaGTTTCCACAGACTTTTCAC +
Preference number: 4 (lower is better)
Translates to: QQSWPSHIFLETLNPLGHPSPGQ*FPQTFH
Trigger: GTGAAAAGTCTGTGGAAAGCACTGGCCTGGAGAGGG...GTGTCCCAGGGGATTCAGAGTCTCCAGAAAGATATGGCTGGGCCAACTCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp AGCAGGGTCACACTAGCTTTATACCCGCTGAGTCCCCACCCTGGCTGTAGTCAGAAGATCTCAGCTCTCTaGCAGCCAAAGTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: SRVTLALYPLSPHPGCSQKISAL*QPKFMV
Trigger: GACCATGAACTTTGGCTGGCAGAGAGCTGAGATCTT...CTGACTACAGCCAGGGTGGGGACTCAGCGGGTATAAAGCTAGTGTGACCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374276.4
CDS-3UTR CCA 90 bp CGTGCCTATTGCTATAGGCAGATGGAGGGGCTCAGATTCATAAAGGCAAAGGCCAAGTCGCCGATCACATaGATGAAGGCAGCTCGGACG +
Preference number: 4 (lower is better)
Translates to: RAYCYRQMEGLRFIKAKAKSPIT*MKAART
Trigger: CGTCCGAGCTGCCTTCATCCATGTGATCGGCGACTT...GGCCTTTGCCTTTATGAATCTGAGCCCCTCCATCTGCCTATAGCAATAGGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCTTTCCCTCCACCATGTCAGGCTCCGACTGGGTCAGGCCAGGTAGGCAACAGAAGACGAAGGTGCAGATaGGGTCTACATACTTGTATT +
Preference number: 4 (lower is better)
Translates to: PFPPPCQAPTGSGQVGNRRRRCR*GLHTCI
Trigger: AATACAAGTATGTAGACCCCATCTGCACCTTCGTCT...TCTGTTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACATGGTGGAGGGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCTGTCCCCAGGATGGTAAAAGTAACCAATCTTCAACAACCACAGGTACTTGGCGTACAGATGAGACTGTaGGGCAGAGGCCAGCTCGCC +
Preference number: 4 (lower is better)
Translates to: PVPRMVKVTNLQQPQVLGVQMRL*GRGQLA
Trigger: GGCGAGCTGGCCTCTGCCCCACAGTCTCATCTGTAC...GCCAAGTACCTGTGGTTGTTGAAGATTGGTTACTTTTACCATCCTGGGGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp AGCAGGGTCACACTAGCTTTATACCCGCTGAGTCCCCACCCTGGCTGTAGTCAGACAACCACAGGTACTTaGCCAACTGGCTCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SRVTLALYPLSPHPGCSQTTTGT*PTGSCS
Trigger: AGAACAAGAGCCAGTTGGCCAAGTACCTGTGGTTGT...CTGACTACAGCCAGGGTGGGGACTCAGCGGGTATAAAGCTAGTGTGACCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR TCA 90 bp CCACCCCTAAGTCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTTGTGTTGGCACAGCTaGGGAAATAAGGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PPLSQESSHTSPRKLRFPLCWHS*GNKERG
Trigger: TCCTCTTTCCTTATTTCCTCAGCTGTGCCAACACAA...GGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGACTTAGGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCTGTCCCCAGGATGGTAAAAGTAACCAATCTTCAACAACCACAGGTACTTGGCCACCCCCGTGCCTATTaGTATAGGCAGATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PVPRMVKVTNLQQPQVLGHPRAY*YRQMEG
Trigger: CCCCTCCATCTGCCTATAGCAATAGGCACGGGGGTG...GCCAAGTACCTGTGGTTGTTGAAGATTGGTTACTTTTACCATCCTGGGGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCTGTCCCCAGGATGGTAAAAGTAACCAATCTTCAACAACCACAGGTACTTGGCGTGATCTCAGCTCACTaGAACCTCTGCCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: PVPRMVKVTNLQQPQVLGVISAH*NLCLPG
Trigger: ACCGGGGAGGCAGAGGTTGCAGTGAGCTGAGATCAC...GCCAAGTACCTGTGGTTGTTGAAGATTGGTTACTTTTACCATCCTGGGGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCACCTTTGCCCCTGCGAGTGGTAGAACATTTGCTGAGGATTAGGCCCAAATACTGGATGGTCACGGTGTaGAAGTGGAACTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PPLPLRVVEHLLRIRPKYWMVTV*KWNFPW
Trigger: CCAAGGGAAGTTCCACTTCCACACCGTGACCATCCA...GTATTTGGGCCTAATCCTCAGCAAATGTTCTACCACTCGCAGGGGCAAAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CGTGCCTATTGCTATAGGCAGATGGAGGGGCTCAGATTCATAAAGGCAAAGGCCAGTCCTCGATCTGGATaGTCACGGTGTGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: RAYCYRQMEGLRFIKAKASPRSG*SRCGSG
Trigger: TCCACTTCCACACCGTGACCATCCAGATCGAGGACT...GGCCTTTGCCTTTATGAATCTGAGCCCCTCCATCTGCCTATAGCAATAGGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCTGTCCCCAGGATGGTAAAAGTAACCAATCTTCAACAACCACAGGTACTTGGCCCCCTGAGATTGTGGTaGAATGGAGCACCCACCAGC +
Preference number: 4 (lower is better)
Translates to: PVPRMVKVTNLQQPQVLGPLRLW*NGAPTS
Trigger: GCTGGTGGGTGCTCCATTCCACCACAATCTCAGGGG...GCCAAGTACCTGTGGTTGTTGAAGATTGGTTACTTTTACCATCCTGGGGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCTGTCCCCAGGATGGTAAAAGTAACCAATCTTCAACAACCACAGGTACTTGGCCATGGCAGTGATGGTTaGTCTGGGCAGCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: PVPRMVKVTNLQQPQVLGHGSDG*SGQPAQ
Trigger: TTGAGCTGGCTGCCCAGAGCAACCATCACTGCCATG...GCCAAGTACCTGTGGTTGTTGAAGATTGGTTACTTTTACCATCCTGGGGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp GTGACACAGGACTCCCTGATAACTGGGCATGTTGTCTCGATGAGTCGGGGACAGCTGTATTCTGAGCAATaGCGATGTGGACAGACAGAA +
Preference number: 4 (lower is better)
Translates to: VTQDSLITGHVVSMSRGQLYSEQ*RCGQTE
Trigger: TTCTGTCTGTCCACATCGCCATTGCTCAGAATACAG...CTGTCCCCGACTCATCGAGACAACATGCCCAGTTATCAGGGAGTCCTGTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CAACAGAGTTGGCCCAGCCATATCTTTCTGGAGACTCTGAATCCCCTGGGACACACAACCACAGGTACTTaGCCAACTGGCTCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: QQSWPSHIFLETLNPLGHTTTGT*PTGSCS
Trigger: AGAACAAGAGCCAGTTGGCCAAGTACCTGTGGTTGT...GTGTCCCAGGGGATTCAGAGTCTCCAGAAAGATATGGCTGGGCCAACTCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCTGTCCCCAGGATGGTAAAAGTAACCAATCTTCAACAACCACAGGTACTTGGCGAGATTGTGGTGGAATaGAGCACCCACCAGCAACCC +
Preference number: 4 (lower is better)
Translates to: PVPRMVKVTNLQQPQVLGEIVVE*STHQQP
Trigger: GGGTTGCTGGTGGGTGCTCCATTCCACCACAATCTC...GCCAAGTACCTGTGGTTGTTGAAGATTGGTTACTTTTACCATCCTGGGGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR GCA 90 bp CCACCTTTGCCCCTGCGAGTGGTAGAACATTTGCTGAGGATTAGGCCCAAATACTGGAGAAGACGAAGGTaGAGATGGGGTCTACATACT +
Preference number: 4 (lower is better)
Translates to: PPLPLRVVEHLLRIRPKYWRRRR*RWGLHT
Trigger: AGTATGTAGACCCCATCTGCACCTTCGTCTTCTCCA...GTATTTGGGCCTAATCCTCAGCAAATGTTCTACCACTCGCAGGGGCAAAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCTGTCCCCAGGATGGTAAAAGTAACCAATCTTCAACAACCACAGGTACTTGGCGGTTTACAACACAGCTaGGGTAGGCAAAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PVPRMVKVTNLQQPQVLGGLQHS*GRQSPG
Trigger: GCCAGGACTTTGCCTACCCCAGCTGTGTTGTAAACC...GCCAAGTACCTGTGGTTGTTGAAGATTGGTTACTTTTACCATCCTGGGGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CAACAGAGTTGGCCCAGCCATATCTTTCTGGAGACTCTGAATCCCCTGGGACACAGACGAAGGTGCAGATaGGGTCTACATACTTGTATT +
Preference number: 4 (lower is better)
Translates to: QQSWPSHIFLETLNPLGHRRRCR*GLHTCI
Trigger: AATACAAGTATGTAGACCCCATCTGCACCTTCGTCT...GTGTCCCAGGGGATTCAGAGTCTCCAGAAAGATATGGCTGGGCCAACTCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CGTGCCTATTGCTATAGGCAGATGGAGGGGCTCAGATTCATAAAGGCAAAGGCCGACAGAGATTTAAAGTaGGAGGCAAGTGACCAAACC +
Preference number: 4 (lower is better)
Translates to: RAYCYRQMEGLRFIKAKADRDLK*EASDQT
Trigger: GGTTTGGTCACTTGCCTCCCACTTTAAATCTCTGTC...GGCCTTTGCCTTTATGAATCTGAGCCCCTCCATCTGCCTATAGCAATAGGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CCA 90 bp CCTGTCCCCAGGATGGTAAAAGTAACCAATCTTCAACAACCACAGGTACTTGGCCTGTATTCTGAGCAATaGCGATGTGGACAGACAGAA +
Preference number: 4 (lower is better)
Translates to: PVPRMVKVTNLQQPQVLGLYSEQ*RCGQTE
Trigger: TTCTGTCTGTCCACATCGCCATTGCTCAGAATACAG...GCCAAGTACCTGTGGTTGTTGAAGATTGGTTACTTTTACCATCCTGGGGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS GCA 90 bp GTCCCGGCAGCCGCGCAGCCGCCCCGCCGAGTGCGCCCTGAAAGTTaGGCGCGGGACTCCGGGTGGCGCTCACCCACCTGCCCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: VPAAAQPPRRVRPES*ARDSGWRSPTCPEG
Trigger: GCCCTCGGGGCAGGTGGGTGAGCGCCACCCGGAGTCCCGCGCGCAACTTTCAGGGCGCACTCGGCGGGGCGGCTGCGCGGCTGCCGGGAC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS GCA 90 bp CAGTCCCGCGCCGAGTCCCGGCAGCCGCGCAGCCGCCCCGCCGAGTaGGCCCTGAAAGTTGCGCGCGGGACTCCGGGTGGCGCTCACCCA +
Preference number: 5 (lower is better)
Translates to: QSRAESRQPRSRPAE*ALKVARGTPGGAHP
Trigger: TGGGTGAGCGCCACCCGGAGTCCCGCGCGCAACTTTCAGGGCGCACTCGGCGGGGCGGCTGCGCGGCTGCCGGGACTCGGCGCGGGACTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS GCA 90 bp CGCCCTGAAAGTTGCGCGCGGGACTCCGGGTGGCGCTCACCCACCTaGCCCGAGGGCCCCGCGAGGTGCGCTCACTCCGGCCCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: RPESCARDSGWRSPT*PEGPARCAHSGPAP
Trigger: AGGAGCCGGGCCGGAGTGAGCGCACCTCGCGGGGCCCTCGGGGCAGGTGGGTGAGCGCCACCCGGAGTCCCGCGCGCAACTTTCAGGGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp GCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGGGGCCAGCCTCCCCTaGGACGTCCCGTGGCTCACC +
Preference number: 5 (lower is better)
Translates to: AGPGGHSVQPPAGPVHAPGASLP*DVPWLT
Trigger: GGTGAGCCACGGGACGTCCAAGGGGAGGCTGGCCCC...TGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp GCCAGGCTGAGAATGGGGCATGAGGCAGGCAGTATGGGCGCGCTGGGGCCAGCCCGTGGCTCACCACCTTaGCCCCTGCGAGTGGTAGAA +
Preference number: 5 (lower is better)
Translates to: ARLRMGHEAGSMGALGPARGSPP*PLRVVE
Trigger: TTCTACCACTCGCAGGGGCAAAGGTGGTGAGCCACG...GGCTGGCCCCAGCGCGCCCATACTGCCTGCCTCATGCCCCATTCTCAGCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS GCA 90 bp GATCCCGTGTATGACCGGATTGCCGGCCTGGCGTCCAACAGATGCTaGTTCTCCTTGGCCTCCATGCAGTCCCGCGCCGAGTCCCGGCAG +
Preference number: 5 (lower is better)
Translates to: DPVYDRIAGLASNRC*FSLASMQSRAESRQ
Trigger: CTGCCGGGACTCGGCGCGGGACTGCATGGAGGCCAAGGAGAAGCAGCATCTGTTGGACGCCAGGCCGGCAATCCGGTCATACACGGGATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp GCCAGGCTGAGAATGGGGCATGAGGCAGGCAGTATGGGCGCGCTGGGGCCAGCCGTGAAGTCAACGCCCTaGGGGGTCCCTTCCATCAAC +
Preference number: 5 (lower is better)
Translates to: ARLRMGHEAGSMGALGPAVKSTP*GVPSIN
Trigger: GTTGATGGAAGGGACCCCCAAGGGCGTTGACTTCAC...GGCTGGCCCCAGCGCGCCCATACTGCCTGCCTCATGCCCCATTCTCAGCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS GCA 90 bp AGAGATCCCGTGTATGACCGGATTGCCGGCCTGGCGTCCAACAGATaGTGCTTCTCCTTGGCCTCCATGCAGTCCCGCGCCGAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: RDPVYDRIAGLASNR*CFSLASMQSRAESR
Trigger: CCGGGACTCGGCGCGGGACTGCATGGAGGCCAAGGAGAAGCAGCATCTGTTGGACGCCAGGCCGGCAATCCGGTCATACACGGGATCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCGGGGCCAGCCTCCCCTaGGACGTCCCGTGGCTCACC +
Preference number: 5 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGGASLP*DVPWLT
Trigger: GGTGAGCCACGGGACGTCCAAGGGGAGGCTGGCCCC...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp GCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCACCAAAGTTCATGGTCTaGGTGGCTGGCCGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: AGPGGHSVQPPAGPVHAPPKFMV*VAGRED
Trigger: GTCCTCCCGGCCAGCCACCAAGACCATGAACTTTGG...TGGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374276.4
CDS TCA 90 bp TCCAGCCACCTGCAGGTCCTGTTCATGCCCCAGTTGGTGCCTGGCTaGGCAGTCAGTCTGAGGGGCCCTGGCATGCCTGACAGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: SSHLQVLFMPQLVPG*AVSLRGPGMPDSPS
Trigger: TGAAGGACTGTCAGGCATGCCAGGGCCCCTCAGACTGACTGCTCAGCCAGGCACCAACTGGGGCATGAACAGGACCTGCAGGTGGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp GCCAGGCTGAGAATGGGGCATGAGGCAGGCAGTATGGGCGCGCTGGGGCCAGCCAACAACCACAGGTACTaGGCCAACTGGCTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: ARLRMGHEAGSMGALGPANNHRY*ANWLLF
Trigger: GAACAAGAGCCAGTTGGCCAAGTACCTGTGGTTGTT...GGCTGGCCCCAGCGCGCCCATACTGCCTGCCTCATGCCCCATTCTCAGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp GATGAGACTGTGGGGCAGAGGCCAGCTCGCCCAAGGCACTTGCTTACAATGGCACCGTGTATGACCGGATaGCCGGCCTGGCGTCCAACA +
Preference number: 5 (lower is better)
Translates to: DETVGQRPARPRHLLTMAPCMTG*PAWRPT
Trigger: TGTTGGACGCCAGGCCGGCAATCCGGTCATACACGG...TGCCATTGTAAGCAAGTGCCTTGGGCGAGCTGGCCTCTGCCCCACAGTCTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTCGTGGCTCACCACCTTaGCCCCTGCGAGTGGTAGAA +
Preference number: 5 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSRGSPP*PLRVVE
Trigger: TTCTACCACTCGCAGGGGCAAAGGTGGTGAGCCACG...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS TCA 90 bp AGGTCCTGTTCATGCCCCAGTTGGTGCCTGGCTGAGCAGTCAGTCTaGGGGGCCCTGGCATGCCTGACAGTCCTTCATGTCCTCCGAGTA +
Preference number: 5 (lower is better)
Translates to: RSCSCPSWCLAEQSV*GALACLTVLHVLRV
Trigger: TACTCGGAGGACATGAAGGACTGTCAGGCATGCCAGGGCCCCTCAGACTGACTGCTCAGCCAGGCACCAACTGGGGCATGAACAGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS TCA 90 bp CAGAGGAATCCAGCCAGCCCCTTCCTGCCACAGAGATCCCGTGTATaGCCTGGCCAGAGGGGAAGAGAGGGAACGCTCAGCTCTGAGATG +
Preference number: 5 (lower is better)
Translates to: QRNPASPFLPQRSRV*PGQRGREGTLSSEM
Trigger: CATCTCAGAGCTGAGCGTTCCCTCTCTTCCCCTCTGGCCAGGTCATACACGGGATCTCTGTGGCAGGAAGGGGCTGGCTGGATTCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498060.1
CDS GCA 90 bp GGTCACAGTGACTGTCAGGACCCTTCTGAGCATGGCAGTGATGGTTaGTCTGGGCAGCCAGCTCAATGGCCTGCAAGTCCAGGCCAGGTC +
Preference number: 5 (lower is better)
Translates to: GHSDCQDPSEHGSDG*SGQPAQWPASPGQV
Trigger: GACCTGGCCTGGACTTGCAGGCCATTGAGCTGGCTGCCCAGAGCAACCATCACTGCCATGCTCAGAAGGGTCCTGACAGTCACTGTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374276.4
ENST00000374278.7
ENST00000498060.1
CDS-3UTR CAA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCCCGTGTATGACCGGATaGCCGGCCTGGCGTCCAACA +
Preference number: 5 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGPCMTG*PAWRPT
Trigger: TGTTGGACGCCAGGCCGGCAATCCGGTCATACACGG...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp CCACCCCTAAGTCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTTCTCCTCCTGCTGGTaGGTGGTGCCGTGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: PPLSQESSHTSPRKLRFPFSSCW*VVPWLC
Trigger: GCACAGCCACGGCACCACCAACCAGCAGGAGGAGAA...GGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGACTTAGGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp AGCAGGGTCACACTAGCTTTATACCCGCTGAGTCCCCACCCTGGCTGTAGTCAGTTCTCCTCCTGCTGGTaGGTGGTGCCGTGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: SRVTLALYPLSPHPGCSQFSSCW*VVPWLC
Trigger: GCACAGCCACGGCACCACCAACCAGCAGGAGGAGAA...CTGACTACAGCCAGGGTGGGGACTCAGCGGGTATAAAGCTAGTGTGACCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp CCTTTCCCTCCACCATGTCAGGCTCCGACTGGGTCAGGCCAGGTAGGCAACAGATCAGGATGGTCAAGGTaGTCCCCAGGACCAGGATGG +
Preference number: 5 (lower is better)
Translates to: PFPPPCQAPTGSGQVGNRSGWSR*SPGPGW
Trigger: CCATCCTGGTCCTGGGGACAACCTTGACCATCCTGA...TCTGTTGCCTACCTGGCCTGACCCAGTCGGAGCCTGACATGGTGGAGGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGTCAGGATGGTCAAGGTaGTCCCCAGGACCAGGATGG +
Preference number: 5 (lower is better)
Translates to: LLPPWARTVKTNSALPLGSGWSR*SPGPGW
Trigger: CCATCCTGGTCCTGGGGACAACCTTGACCATCCTGA...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCCGAGTGGTAGAACATTaGCTGAGGATTAGGCCCAAA +
Preference number: 5 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPRVVEH*LRIRPK
Trigger: TTTGGGCCTAATCCTCAGCAAATGTTCTACCACTCG...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTGAAGTGCCAGGGGGCTaGGAGGCTGTTAGTGCAGAA +
Preference number: 5 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSEVPGG*EAVSAE
Trigger: TTCTGCACTAACAGCCTCCAAGCCCCCTGGCACTTC...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGGAGGGGTGTAAGGACTaGGCATACGGCAAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: LLPPWARTVKTNSALPLGEGCKD*AYGKAQ
Trigger: CTGGGCTTTGCCGTATGCCAAGTCCTTACACCCCTC...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS TCA 90 bp GGGCTTCTACCCCCTCCACCGACAGCAGCAGATCACGAACAGCTGTaGAGTCAACGCCCTTGGGGGTCCCTTCCATCAACACCAGGATCA +
Preference number: 5 (lower is better)
Translates to: GLLPPPPTAADHEQL*SQRPWGSLPSTPGS
Trigger: TGATCCTGGTGTTGATGGAAGGGACCCCCAAGGGCGTTGACTTCACAGCTGTTCGTGATCTGCTGCTGTCGGTGGAGGGGGTAGAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS CCA 90 bp GCTGCCACTAGGACACCCATGCTCTGCATAAAGTCGCCGATCACATaGATGAAGGCAGCTCGGACGCTGGGGTTCTCCTCCTGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: AATRTPMLCIKSPIT*MKAARTLGFSSCWL
Trigger: CAACCAGCAGGAGGAGAACCCCAGCGTCCGAGCTGCCTTCATCCATGTGATCGGCGACTTTATGCAGAGCATGGGTGTCCTAGTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS CCA 90 bp GGATGGTCACGGTGTGGAAGTGGAACTTCCCTTGGAGGCGGCTGCTaGCTGTCTTCAGCACAGCCTGGGCGTCTGTATTCTGAGCAATGG +
Preference number: 5 (lower is better)
Translates to: GWSRCGSGTSLGGGC*LSSAQPGRLYSEQW
Trigger: CCATTGCTCAGAATACAGACGCCCAGGCTGTGCTGAAGACAGCCAGCAGCCGCCTCCAAGGGAAGTTCCACTTCCACACCGTGACCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp GGCTGGGCCTGGGGGACACTCAGTCCAGCCACCTGCAGGTCCTGTTCATGCCCCGACAGGTTTCCCCTCTaGCATCTTGTAAACAAAAGC +
Preference number: 5 (lower is better)
Translates to: GWAWGTLSPATCRSCSCPDRFPL*HLVNKS
Trigger: GCTTTTGTTTACAAGATGCAAGAGGGGAAACCTGTC...GGGGCATGAACAGGACCTGCAGGTGGCTGGACTGAGTGTCCCCCAGGCCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCCCACCTCCTCCCACCTaGGGCCAGAACAGTCAAGAC +
Preference number: 5 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGPPPPT*GQNSQD
Trigger: GTCTTGACTGTTCTGGCCCAAGGTGGGAGGAGGTGG...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS GCA 90 bp TCTGGATGGTCACGGTGTGGAAGTGGAACTTCCCTTGGAGGCGGCTaGTGGCTGTCTTCAGCACAGCCTGGGCGTCTGTATTCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: SGWSRCGSGTSLGGG*WLSSAQPGRLYSEQ
Trigger: TTGCTCAGAATACAGACGCCCAGGCTGTGCTGAAGACAGCCAGCAGCCGCCTCCAAGGGAAGTTCCACTTCCACACCGTGACCATCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS CCA 90 bp ATGCCTGACAGTCCTTCATGTCCTCCGAGTAGTCCTCGATCTGGATaGTCACGGTGTGGAAGTGGAACTTCCCTTGGAGGCGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: MPDSPSCPPSSPRSG*SRCGSGTSLGGGCW
Trigger: CCAGCAGCCGCCTCCAAGGGAAGTTCCACTTCCACACCGTGACCATCCAGATCGAGGACTACTCGGAGGACATGAAGGACTGTCAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp CCACCCCTAAGTCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCGTGAAGTCAACGCCCTaGGGGGTCCCTTCCATCAAC +
Preference number: 5 (lower is better)
Translates to: PPLSQESSHTSPRKLRFPVKSTP*GVPSIN
Trigger: GTTGATGGAAGGGACCCCCAAGGGCGTTGACTTCAC...GGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGACTTAGGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp CAACAGAGTTGGCCCAGCCATATCTTTCTGGAGACTCTGAATCCCCTGGGACACCCACCTCCTCCCACCTaGGGCCAGAACAGTCAAGAC +
Preference number: 5 (lower is better)
Translates to: QQSWPSHIFLETLNPLGHPPPPT*GQNSQD
Trigger: GTCTTGACTGTTCTGGCCCAAGGTGGGAGGAGGTGG...GTGTCCCAGGGGATTCAGAGTCTCCAGAAAGATATGGCTGGGCCAACTCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp CCACCCCTAAGTCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTTGAGTCCCCTGAGATaGTGGTGGAATGGAGCACCC +
Preference number: 5 (lower is better)
Translates to: PPLSQESSHTSPRKLRFPLSPLR*WWNGAP
Trigger: GGGTGCTCCATTCCACCACAATCTCAGGGGACTCAA...GGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGACTTAGGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp TCAGGAATCTTCACACACAAGCCCCAGGAAGCTGCGGTTTCCCTCCTAGCTGGCTTGAGTCCCCTGAGATaGTGGTGGAATGGAGCACCC +
Preference number: 5 (lower is better)
Translates to: SGIFTHKPQEAAVSLLAGLSPLR*WWNGAP
Trigger: GGGTGCTCCATTCCACCACAATCTCAGGGGACTCAA...GCCAGCTAGGAGGGAAACCGCAGCTTCCTGGGGCTTGTGTGTGAAGATTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp CCACCTTTGCCCCTGCGAGTGGTAGAACATTTGCTGAGGATTAGGCCCAAATACGAAGTGCCAGGGGGCTaGGAGGCTGTTAGTGCAGAA +
Preference number: 5 (lower is better)
Translates to: PPLPLRVVEHLLRIRPKYEVPGG*EAVSAE
Trigger: TTCTGCACTAACAGCCTCCAAGCCCCCTGGCACTTC...GTATTTGGGCCTAATCCTCAGCAAATGTTCTACCACTCGCAGGGGCAAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp CCCTGGGACACTCTCAGGGCAACAGAAGTGCCAGGGGGCTTGGAGGCTGTTAGTGACAGGTTTCCCCTCTaGCATCTTGTAAACAAAAGC +
Preference number: 5 (lower is better)
Translates to: PWDTLRATEVPGGLEAVSDRFPL*HLVNKS
Trigger: GCTTTTGTTTACAAGATGCAAGAGGGGAAACCTGTC...ACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGTCCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp AGCAGGGTCACACTAGCTTTATACCCGCTGAGTCCCCACCCTGGCTGTAGTCAGAACAACCACAGGTACTaGGCCAACTGGCTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: SRVTLALYPLSPHPGCSQNNHRY*ANWLLF
Trigger: GAACAAGAGCCAGTTGGCCAAGTACCTGTGGTTGTT...CTGACTACAGCCAGGGTGGGGACTCAGCGGGTATAAAGCTAGTGTGACCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp CTCCTCCCACCTTGGGCCAGAACAGTCAAGACAAACTCAGCACTGCCCCTGGGGATGGGGTCTACATACTaGTATTCTGGCTTGAAGTAT +
Preference number: 5 (lower is better)
Translates to: LLPPWARTVKTNSALPLGMGSTY*YSGLKY
Trigger: ATACTTCAAGCCAGAATACAAGTATGTAGACCCCAT...CCCCAGGGGCAGTGCTGAGTTTGTCTTGACTGTTCTGGCCCAAGGTGGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp CCTGTCCCCAGGATGGTAAAAGTAACCAATCTTCAACAACCACAGGTACTTGGCGAGGGGTGTAAGGACTaGGCATACGGCAAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: PVPRMVKVTNLQQPQVLGEGCKD*AYGKAQ
Trigger: CTGGGCTTTGCCGTATGCCAAGTCCTTACACCCCTC...GCCAAGTACCTGTGGTTGTTGAAGATTGGTTACTTTTACCATCCTGGGGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS CCA 90 bp GGATCACATCTCTCAGGATGGTCAAGGTTGTCCCCAGGACCAGGATaGAGAAGACGAAGGTGCAGATGGGGTCTACATACTTGTATTCTG +
Preference number: 5 (lower is better)
Translates to: GSHLSGWSRLSPGPG*RRRRCRWGLHTCIL
Trigger: CAGAATACAAGTATGTAGACCCCATCTGCACCTTCGTCTTCTCCATCCTGGTCCTGGGGACAACCTTGACCATCCTGAGAGATGTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS-3UTR CAA 90 bp CCTGTCCCCAGGATGGTAAAAGTAACCAATCTTCAACAACCACAGGTACTTGGCCGAGTGGTAGAACATTaGCTGAGGATTAGGCCCAAA +
Preference number: 5 (lower is better)
Translates to: PVPRMVKVTNLQQPQVLGRVVEH*LRIRPK
Trigger: TTTGGGCCTAATCCTCAGCAAATGTTCTACCACTCG...GCCAAGTACCTGTGGTTGTTGAAGATTGGTTACTTTTACCATCCTGGGGACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS TCA 72 bp CCCGGCAGCCGCGCAGCCGCCCCGCCGAGTGCGCCCTaGAAGTTGCGCGCGGGACTCCGGGTGGCGCTCACC +
Preference number: 6 (lower is better)
Translates to: PGSRAAAPPSAP*KLRAGLRVALT
Trigger: GGTGAGCGCCACCCGGAGTCCCGCGCGCAACTTTCAGGGCGCACTCGGCGGGGCGGCTGCGCGGCTGCCGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS GCA 72 bp GCCGAGTCCCGGCAGCCGCGCAGCCGCCCCGCCGAGTaGGCCCTGAAAGTTGCGCGCGGGACTCCGGGTGGC +
Preference number: 6 (lower is better)
Translates to: AESRQPRSRPAE*ALKVARGTPGG
Trigger: GCCACCCGGAGTCCCGCGCGCAACTTTCAGGGCGCACTCGGCGGGGCGGCTGCGCGGCTGCCGGGACTCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS CCA 72 bp AGGCAGCTCGGACGCTGGGGTTCTCCTCCTGCTGGTTaGTGGTGCCGTGGCTGTGCCCATGGCCAGACTGGT +
Preference number: 6 (lower is better)
Translates to: RQLGRWGSPPAG*WCRGCAHGQTG
Trigger: ACCAGTCTGGCCATGGGCACAGCCACGGCACCACCAACCAGCAGGAGGAGAACCCCAGCGTCCGAGCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS CAA 72 bp ATTGCCGGCCTGGCGTCCAACAGATGCTGCTTCTCCTaGGCCTCCATGCAGTCCCGCGCCGAGTCCCGGCAG +
Preference number: 6 (lower is better)
Translates to: IAGLASNRCCFS*ASMQSRAESRQ
Trigger: CTGCCGGGACTCGGCGCGGGACTGCATGGAGGCCAAGGAGAAGCAGCATCTGTTGGACGCCAGGCCGGCAAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS CAA 72 bp AAGGCAGCTCGGACGCTGGGGTTCTCCTCCTGCTGGTaGGTGGTGCCGTGGCTGTGCCCATGGCCAGACTGG +
Preference number: 6 (lower is better)
Translates to: KAARTLGFSSCW*VVPWLCPWPDW
Trigger: CCAGTCTGGCCATGGGCACAGCCACGGCACCACCAACCAGCAGGAGGAGAACCCCAGCGTCCGAGCTGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS GCA 72 bp TGGATGAAGGCAGCTCGGACGCTGGGGTTCTCCTCCTaGTGGTTGGTGGTGCCGTGGCTGTGCCCATGGCCA +
Preference number: 6 (lower is better)
Translates to: WMKAARTLGFSS*WLVVPWLCPWP
Trigger: TGGCCATGGGCACAGCCACGGCACCACCAACCAGCAGGAGGAGAACCCCAGCGTCCGAGCTGCCTTCATCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS CCA 72 bp CAGCTCGGACGCTGGGGTTCTCCTCCTGCTGGTTGGTaGTGCCGTGGCTGTGCCCATGGCCAGACTGGTGAA +
Preference number: 6 (lower is better)
Translates to: QLGRWGSPPAGW*CRGCAHGQTGE
Trigger: TTCACCAGTCTGGCCATGGGCACAGCCACGGCACCACCAACCAGCAGGAGGAGAACCCCAGCGTCCGAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS CCA 72 bp ATGAAGGCAGCTCGGACGCTGGGGTTCTCCTCCTGCTaGTTGGTGGTGCCGTGGCTGTGCCCATGGCCAGAC +
Preference number: 6 (lower is better)
Translates to: MKAARTLGFSSC*LVVPWLCPWPD
Trigger: GTCTGGCCATGGGCACAGCCACGGCACCACCAACCAGCAGGAGGAGAACCCCAGCGTCCGAGCTGCCTTCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS TCA 72 bp CTGCAGGTCCTGTTCATGCCCCAGTTGGTGCCTGGCTaGGCAGTCAGTCTGAGGGGCCCTGGCATGCCTGAC +
Preference number: 6 (lower is better)
Translates to: LQVLFMPQLVPG*AVSLRGPGMPD
Trigger: GTCAGGCATGCCAGGGCCCCTCAGACTGACTGCTCAGCCAGGCACCAACTGGGGCATGAACAGGACCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS CCA 72 bp CATGGCAGTGATGGTTGCTCTGGGCAGCCAGCTCAATaGCCTGCAAGTCCAGGCCAGGTCGGGGCAGAGGAA +
Preference number: 6 (lower is better)
Translates to: HGSDGCSGQPAQ*PASPGQVGAEE
Trigger: TTCCTCTGCCCCGACCTGGCCTGGACTTGCAGGCCATTGAGCTGGCTGCCCAGAGCAACCATCACTGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374276.4
ENST00000374278.7
ENST00000498060.1
CDS TCA 72 bp TCATGCCCCAGTTGGTGCCTGGCTGAGCAGTCAGTCTaGGGGGCCCTGGCATGCCTGACAGTCCTTCATGTC +
Preference number: 6 (lower is better)
Translates to: SCPSWCLAEQSV*GALACLTVLHV
Trigger: GACATGAAGGACTGTCAGGCATGCCAGGGCCCCTCAGACTGACTGCTCAGCCAGGCACCAACTGGGGCATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS CCA 72 bp GCCACAGAGATCCCGTGTATGACCGGATTGCCGGCCTaGCGTCCAACAGATGCTGCTTCTCCTTGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: ATEIPCMTGLPA*RPTDAASPWPP
Trigger: TGGAGGCCAAGGAGAAGCAGCATCTGTTGGACGCCAGGCCGGCAATCCGGTCATACACGGGATCTCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS CAA 90 bp GTAGTCCTCGATCTGGATGGTCACGGTGTGGAAGTGGAACTTCCCTaGGAGGCGGCTGCTGGCTGTCTTCAGCACAGCCTGGGCGTCTGT +
Preference number: 6 (lower is better)
Translates to: VVLDLDGHGVEVELP*EAAAGCLQHSLGVC
Trigger: ACAGACGCCCAGGCTGTGCTGAAGACAGCCAGCAGCCGCCTCCAAGGGAAGTTCCACTTCCACACCGTGACCATCCAGATCGAGGACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS TCA 72 bp CCCCCTCCACCGACAGCAGCAGATCACGAACAGCTGTaGAGTCAACGCCCTTGGGGGTCCCTTCCATCAACA +
Preference number: 6 (lower is better)
Translates to: PPPPTAADHEQL*SQRPWGSLPST
Trigger: TGTTGATGGAAGGGACCCCCAAGGGCGTTGACTTCACAGCTGTTCGTGATCTGCTGCTGTCGGTGGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS GCA 72 bp TCACGGTGTGGAAGTGGAACTTCCCTTGGAGGCGGCTaGTGGCTGTCTTCAGCACAGCCTGGGCGTCTGTAT +
Preference number: 6 (lower is better)
Translates to: SRCGSGTSLGGG*WLSSAQPGRLY
Trigger: ATACAGACGCCCAGGCTGTGCTGAAGACAGCCAGCAGCCGCCTCCAAGGGAAGTTCCACTTCCACACCGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS TCA 72 bp ACCTGGCCAGAGGGGAAGAGAGGGAACGCTCAGCTCTaGGATGAGGTAAGGAGGGCCGACTCTAGTCCCATT +
Preference number: 6 (lower is better)
Translates to: TWPEGKRGNAQL*DEVRRADSSPI
Trigger: AATGGGACTAGAGTCGGCCCTCCTTACCTCATCTCAGAGCTGAGCGTTCCCTCTCTTCCCCTCTGGCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498060.1
CDS GCA 72 bp GACTGTCAGGACCCTTCTGAGCATGGCAGTGATGGTTaGTCTGGGCAGCCAGCTCAATGGCCTGCAAGTCCA +
Preference number: 6 (lower is better)
Translates to: DCQDPSEHGSDG*SGQPAQWPASP
Trigger: TGGACTTGCAGGCCATTGAGCTGGCTGCCCAGAGCAACCATCACTGCCATGCTCAGAAGGGTCCTGACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374276.4
ENST00000374278.7
ENST00000498060.1
CDS CCA 72 bp AGGACACCCATGCTCTGCATAAAGTCGCCGATCACATaGATGAAGGCAGCTCGGACGCTGGGGTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: RTPMLCIKSPIT*MKAARTLGFSS
Trigger: GGAGGAGAACCCCAGCGTCCGAGCTGCCTTCATCCATGTGATCGGCGACTTTATGCAGAGCATGGGTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS TCA 72 bp TTGGTGGTGCCGTGGCTGTGCCCATGGCCAGACTGGTaGAGGGTCAACCCCATTATGATGTTCACAGCCACA +
Preference number: 6 (lower is better)
Translates to: LVVPWLCPWPDW*RVNPIMMFTAT
Trigger: TGTGGCTGTGAACATCATAATGGGGTTGACCCTTCACCAGTCTGGCCATGGGCACAGCCACGGCACCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS CCA 72 bp AGTCCTTCATGTCCTCCGAGTAGTCCTCGATCTGGATaGTCACGGTGTGGAAGTGGAACTTCCCTTGGAGGC +
Preference number: 6 (lower is better)
Translates to: SPSCPPSSPRSG*SRCGSGTSLGG
Trigger: GCCTCCAAGGGAAGTTCCACTTCCACACCGTGACCATCCAGATCGAGGACTACTCGGAGGACATGAAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS CAA 72 bp GGAGGGCCGACTCTAGTCCCATTTCTCTGTGAGGCCTaGTGTCCACTGGGAAAAATAGCTAAGGACGCTCCG +
Preference number: 6 (lower is better)
Translates to: GGPTLVPFLCEA*CPLGKIAKDAP
Trigger: CGGAGCGTCCTTAGCTATTTTTCCCAGTGGACACAAGGCCTCACAGAGAAATGGGACTAGAGTCGGCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498060.1
CDS CCA 72 bp CTCTCAGGATGGTCAAGGTTGTCCCCAGGACCAGGATaGAGAAGACGAAGGTGCAGATGGGGTCTACATACT +
Preference number: 6 (lower is better)
Translates to: LSGWSRLSPGPG*RRRRCRWGLHT
Trigger: AGTATGTAGACCCCATCTGCACCTTCGTCTTCTCCATCCTGGTCCTGGGGACAACCTTGACCATCCTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000374278.7
CDS TCA 72 bp CCAGGGCTCCCAAGATCTCAACGACTTCTCCGATCATaGACAACAGGCAGATGGCAGAGGCTACATACAGCT +
Preference number: 6 (lower is better)
Translates to: PGLPRSQRLLRS*TTGRWQRLHTA
Trigger: AGCTGTATGTAGCCTCTGCCATCTGCCTGTTGTTCATGATCGGAGAAGTCGTTGAGATCTTGGGAGCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374278.7
CDS TCA 72 bp TGTGTGCCAGGTACCCACCAACGACTTCTCCGATCATaGACAACAGGCAGATGGCAGAGGCTACATACAGCT +
Preference number: 6 (lower is better)
Translates to: CVPGTHQRLLRS*TTGRWQRLHTA
Trigger: AGCTGTATGTAGCCTCTGCCATCTGCCTGTTGTTCATGATCGGAGAAGTCGTTGGTGGGTACCTGGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374276.4
ENST00000498060.1
CDS TCA 72 bp ATAGCTAAGGACGCTCCGAGCTCGACAAACCAGAGGTaGGAAGCCTGTATTCAGACGGGGATGATAGGGGAA +
Preference number: 6 (lower is better)
Translates to: IAKDAPSSTNQR*EACIQTGMIGE
Trigger: TTCCCCTATCATCCCCGTCTGAATACAGGCTTCTCACCTCTGGTTTGTCGAGCTCGGAGCGTCCTTAGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498060.1