RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC30A10 (Homo sapiens)

Ensembl gene IDs: ENSG00000196660

Ensembl transcript IDs: ENST00000356609.2, ENST00000366926.4, ENST00000484079.1, ENST00000484239.5

Found 374 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTTGGAGATGCAGGGTGAGTTGCAGAGCAACAGTAAGTCCTTCTaGTCCAGGGGTTCCTTCAAGTCCACATTTTCAAACTGGATGGTC +
Preference number: 1 (lower is better)
Translates to: PLEMQGELQSNSKSF*SRGSFKSTFSNWMV
Trigger: GACCATCCAGTTTGAAAATGTGGACTTGAAGGAACCCCTGGAGCAGAAGGACTTACTGTTGCTCTGCAACTCACCCTGCATCTCCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR GCA 90 bp GGAGACATTGGTTGTCACAACTTCGGGGGACAGTACCGGCATTTATaGATAGCGGTCAGGGGTGCAGCTAAACATCCTACAGTACACAAC +
Preference number: 1 (lower is better)
Translates to: GDIGCHNFGGQYRHL*IAVRGAAKHPTVHN
Trigger: GTTGTGTACTGTAGGATGTTTAGCTGCACCCCTGACCGCTATGCATAAATGCCGGTACTGTCCCCCGAAGTTGTGACAACCAATGTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR CCA 90 bp AAGTCCTTCTGCTCCAGGGGTTCCTTCAAGTCCACATTTTCAAACTaGATGGTCACATTGTGGATTCCCGCATGGTGGAAGATTTCTCGA +
Preference number: 1 (lower is better)
Translates to: KSFCSRGSFKSTFSN*MVTLWIPAWWKISR
Trigger: TCGAGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTGAAAATGTGGACTTGAAGGAACCCCTGGAGCAGAAGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR CCA 90 bp GTCTGGGCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTTGTaGTTCCAAAGTGCCTCGTCTATATGGTCTGATTATGTGAGTACC +
Preference number: 1 (lower is better)
Translates to: VWAYNPESSFCEPSL*FQSASSIWSDYVST
Trigger: GGTACTCACATAATCAGACCATATAGACGAGGCACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGCCCAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR CCA 90 bp CCTTCTGCTCCAGGGGTTCCTTCAAGTCCACATTTTCAAACTGGATaGTCACATTGTGGATTCCCGCATGGTGGAAGATTTCTCGAATTT +
Preference number: 1 (lower is better)
Translates to: PSAPGVPSSPHFQTG*SHCGFPHGGRFLEF
Trigger: AAATTCGAGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTGAAAATGTGGACTTGAAGGAACCCCTGGAGCAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR TCA 90 bp ATTCCCGCATGGTGGAAGATTTCTCGAATTTTTGTGCTGGCATCTTaGTATCCCCTGTCCTTAGGATACTTGATGTGCAGGGTGGCAATA +
Preference number: 1 (lower is better)
Translates to: IPAWWKISRIFVLAS*YPLSLGYLMCRVAI
Trigger: TATTGCCACCCTGCACATCAAGTATCCTAAGGACAGGGGATATCAAGATGCCAGCACAAAAATTCGAGAAATCTTCCACCATGCGGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR TCA 90 bp CGTGTAGAAGGCCAGGTGAGCACACAGGACAACTGGTCCCTGAGCTaGCACACAAAATATGCCGTAGACTTTAAAAATTATGTCAGTTCT +
Preference number: 1 (lower is better)
Translates to: RVEGQVSTQDNWSLS*HTKYAVDFKNYVSS
Trigger: AGAACTGACATAATTTTTAAAGTCTACGGCATATTTTGTGTGTCAGCTCAGGGACCAGTTGTCCTGTGTGCTCACCTGGCCTTCTACACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR GCA 90 bp ATGTGCAGGGTGGCAATAATCTTTCCACTTACAAGTTCCCAGATGTaGACTTCATGTACACTGCTAATTCCAGGCACAGCAGAGAGTTTA +
Preference number: 1 (lower is better)
Translates to: MCRVAIIFPLTSSQM*TSCTLLIPGTAESL
Trigger: TAAACTCTCTGCTGTGCCTGGAATTAGCAGTGTACATGAAGTGCACATCTGGGAACTTGTAAGTGGAAAGATTATTGCCACCCTGCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR TCA 90 bp CAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTaGGCCCCAGTCCCAGACTTTAATGTCCCTGATATATACACTAGT +
Preference number: 1 (lower is better)
Translates to: QFRNKNFFEHCIRSY*APVPDFNVPDIYTS
Trigger: ACTAGTGTATATATCAGGGACATTAAAGTCTGGGACTGGGGCTCAATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR CCA 90 bp TTTTTGGCTCTAAGGAATTTCAACCAATGTTTATGTAGGAGAATCTaGCCCACTGATCTCCATGCCAAGTTTCTTAAGAGGATGCACTGT +
Preference number: 1 (lower is better)
Translates to: FLALRNFNQCLCRRI*PTDLHAKFLKRMHC
Trigger: ACAGTGCATCCTCTTAAGAAACTTGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCCTTAGAGCCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR TCA 90 bp CAAATGCAAGCCACTCAACCCAATACAAAATTATTGCACTTAGCATaGTTGGACATTATTAAATGCAGTCAGCCAAACTGTCTTAAAAAG +
Preference number: 1 (lower is better)
Translates to: QMQATQPNTKLLHLA*LDIIKCSQPNCLKK
Trigger: CTTTTTAAGACAGTTTGGCTGACTGCATTTAATAATGTCCAATCATGCTAAGTGCAATAATTTTGTATTGGGTTGAGTGGCTTGCATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR TCA 90 bp TGGGCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTTGTGGTTCCAAAGTGCACAGCCATTGACGTaGGCCAGAGGCAGTGCCCCG +
Preference number: 2 (lower is better)
Translates to: WAYNPESSFCEPSLWFQSAQPLT*ARGSAP
Trigger: CGGGGCACTGCCTCTGGCTCACGTCAATGGCTGTGC...ACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR CCA 90 bp AGGCCATCACTTCCGTATGTGTCTAGAGAGGGCCCACCATTGTGCTCAGCACAGTGGATGGTCACATTGTaGATTCCCGCATGGTGGAAG +
Preference number: 2 (lower is better)
Translates to: RPSLPYVSREGPPLCSAQWMVTL*IPAWWK
Trigger: CTTCCACCATGCGGGAATCCACAATGTGACCATCCA...CTGTGCTGAGCACAATGGTGGGCCCTCTCTAGACACATACGGAAGTGATGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR TCA 90 bp GCTGCCTTCATTATCAACCCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGTCAAAGAGCAGCATaGGACACCCAGGGGAATGGA +
Preference number: 2 (lower is better)
Translates to: AAFIINPAPLKNPVQILNSQRAA*DTQGNG
Trigger: TCCATTCCCCTGGGTGTCTCATGCTGCTCTTTGACT...GTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGATAATGAAGGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR-3UTR CCA 90 bp GCTGCCTTCATTATCAACCCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACGCTGCAAGTCTAGTCTaGGCCTACAACCCAGAAAGC +
Preference number: 2 (lower is better)
Translates to: AAFIINPAPLKNPVQILNAASLV*AYNPES
Trigger: GCTTTCTGGGTTGTAGGCCCAGACTAGACTTGCAGC...GTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGATAATGAAGGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR CAA 90 bp TTGACTCCTTTTGGGACCATCTGTAGCAGAATGGCAGCGGTCTCCTaGATAAGCGGGAAGGCAGATGACAAAATGATGATGACCATGAGG +
Preference number: 2 (lower is better)
Translates to: LTPFGTICSRMAAVS*ISGKADDKMMMTMR
Trigger: CCTCATGGTCATCATCATTTTGTCATCTGCCTTCCCGCTTATCAAGGAGACCGCTGCCATTCTGCTACAGATGGTCCCAAAAGGAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR CAA 90 bp TCTCCAGGAAGAGGTCACTCTCCCTTGAAAATCATCCTTTCCGGATaGTTCTCATTAGAGTGCAGAGTAGGTGCAGTGTCTGGCATGGCT +
Preference number: 2 (lower is better)
Translates to: SPGRGHSPLKIILSG*FSLECRVGAVSGMA
Trigger: AGCCATGCCAGACACTGCACCTACTCTGCACTCTAATGAGAACAATCCGGAAAGGATGATTTTCAAGGGAGAGTGACCTCTTCCTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR TCA 90 bp CCTGGAGTAAGCCTCACAAAAGCTCTTATGACCTCACAGGGCAGCTGTCTTATTTCAACCCAGCACCTCTaGAAAACCCTGTGCAGATTC +
Preference number: 2 (lower is better)
Translates to: PGVSLTKALMTSQGSCLISTQHL*KTLCRF
Trigger: GAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGA...AATAAGACAGCTGCCCTGTGAGGTCATAAGAGCTTTTGTGAGGCTTACTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR CCA 90 bp AGGCCATCACTTCCGTATGTGTCTAGAGAGGGCCCACCATTGTGCTCAGCACAGTTTCATCATGTCTTCTaGCTCATTCTGGGTGTTGAA +
Preference number: 2 (lower is better)
Translates to: RPSLPYVSREGPPLCSAQFHHVF*LILGVE
Trigger: TTCAACACCCAGAATGAGCCAGAAGACATGATGAAA...CTGTGCTGAGCACAATGGTGGGCCCTCTCTAGACACATACGGAAGTGATGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR CCA 90 bp GCTGCCTTCATTATCAACCCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACTGTGAGCCAAGCTTGTaGTTCCAAAGTGCCTCGTCT +
Preference number: 2 (lower is better)
Translates to: AAFIINPAPLKNPVQILNCEPSL*FQSASS
Trigger: AGACGAGGCACTTTGGAACCACAAGCTTGGCTCACA...GTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGATAATGAAGGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR-3UTR CCA 90 bp AGAGTGCAGAGTAGGTGCAGTGTCTGGCATGGCTTTGTACTAAGAGGTGACAGTTTATGTAGGAGAATCTaGCCCACTGATCTCCATGCC +
Preference number: 2 (lower is better)
Translates to: RVQSRCSVWHGFVLRGDSLCRRI*PTDLHA
Trigger: GGCATGGAGATCAGTGGGCCAGATTCTCCTACATAA...ACTGTCACCTCTTAGTACAAAGCCATGCCAGACACTGCACCTACTCTGCACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR TCA 90 bp AGAGTGCAGAGTAGGTGCAGTGTCTGGCATGGCTTTGTACTAAGAGGTGACAGTACCCTGTGCAGATTCTaGACAGGACTTTACACACTA +
Preference number: 2 (lower is better)
Translates to: RVQSRCSVWHGFVLRGDSTLCRF*TGLYTL
Trigger: TAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGT...ACTGTCACCTCTTAGTACAAAGCCATGCCAGACACTGCACCTACTCTGCACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR GCA 90 bp AGGCCATCACTTCCGTATGTGTCTAGAGAGGGCCCACCATTGTGCTCAGCACAGTTAGGATACTTGATGTaGAGGGTGGCAATAATCTTT +
Preference number: 2 (lower is better)
Translates to: RPSLPYVSREGPPLCSAQLGYLM*RVAIIF
Trigger: AAAGATTATTGCCACCCTGCACATCAAGTATCCTAA...CTGTGCTGAGCACAATGGTGGGCCCTCTCTAGACACATACGGAAGTGATGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR GCA 90 bp TGGGCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTTGTGGTTCCAAAGTAACAGTAAGTCCTTCTaGTCCAGGGGTTCCTTCAAG +
Preference number: 2 (lower is better)
Translates to: WAYNPESSFCEPSLWFQSNSKSF*SRGSFK
Trigger: CTTGAAGGAACCCCTGGAGCAGAAGGACTTACTGTT...ACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR CCA 90 bp CTACAGTACACAACCCACACATCAGGAGCAAGAACACATCCAATTCAAAATGTCGTTCTCCCAGTGCTTTaGGAGGCCAAGGCGAGAGAA +
Preference number: 2 (lower is better)
Translates to: LQYTTHTSGARTHPIQNVVLPVL*EAKARE
Trigger: TTCTCTCGCCTTGGCCTCCCAAAGCACTGGGAGAAC...GACATTTTGAATTGGATGTGTTCTTGCTCCTGATGTGTGGGTTGTGTACTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR CAA 90 bp GATTCCCGCATGGTGGAAGATTTCTCGAATTTTTGTGCTGGCATCTaGATATCCCCTGTCCTTAGGATACTTGATGTGCAGGGTGGCAAT +
Preference number: 2 (lower is better)
Translates to: DSRMVEDFSNFCAGI*ISPVLRILDVQGGN
Trigger: ATTGCCACCCTGCACATCAAGTATCCTAAGGACAGGGGATATCAAGATGCCAGCACAAAAATTCGAGAAATCTTCCACCATGCGGGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR CAA 90 bp CTAGTCTGGGCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTaGTGGTTCCAAAGTGCCTCGTCTATATGGTCTGATTATGTGAGT +
Preference number: 2 (lower is better)
Translates to: LVWAYNPESSFCEPS*WFQSASSIWSDYVS
Trigger: ACTCACATAATCAGACCATATAGACGAGGCACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGCCCAGACTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR-3UTR CCA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCATCACAGTGCCACAGGTaGCAAATGCAAGCCACTCAA +
Preference number: 2 (lower is better)
Translates to: GISTNVYVGESGPLISMPSQCHR*QMQATQ
Trigger: TTGAGTGGCTTGCATTTGCCACCTGTGGCACTGTGA...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR TCA 90 bp GCTGCCTTCATTATCAACCCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAACTTGCCTCTTTTATaGTCGTTAAGGGGATTGGGA +
Preference number: 2 (lower is better)
Translates to: AAFIINPAPLKNPVQILNNLPLL*SLRGLG
Trigger: TCCCAATCCCCTTAACGATCATAAAAGAGGCAAGTT...GTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGATAATGAAGGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR-3UTR TCA 90 bp CTACAGTACACAACCCACACATCAGGAGCAAGAACACATCCAATTCAAAATGTCTCACAAAAGCTCTTATaGCCTCACAGGGCAGCTGTC +
Preference number: 2 (lower is better)
Translates to: LQYTTHTSGARTHPIQNVSQKLL*PHRAAV
Trigger: GACAGCTGCCCTGTGAGGTCATAAGAGCTTTTGTGA...GACATTTTGAATTGGATGTGTTCTTGCTCCTGATGTGTGGGTTGTGTACTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR GCA 90 bp TTCCAAAGTGCCTCGTCTATATGGTCTGATTATGTGAGTACCAGATTAAAAATGGAGGGCCCACCATTGTaGTCAGCACAGCCATTGACG +
Preference number: 2 (lower is better)
Translates to: FQSASSIWSDYVSTRLKMEGPPL*SAQPLT
Trigger: CGTCAATGGCTGTGCTGAGCACAATGGTGGGCCCTC...CATTTTTAATCTGGTACTCACATAATCAGACCATATAGACGAGGCACTTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR TCA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGAACTTGCCTCTTTTATaGTCGTTAAGGGGATTGGGA +
Preference number: 2 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKNLPLL*SLRGLG
Trigger: TCCCAATCCCCTTAACGATCATAAAAGAGGCAAGTT...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR-3UTR TCA 90 bp CCTGGAGTAAGCCTCACAAAAGCTCTTATGACCTCACAGGGCAGCTGTCTTATTCATACTTCAGGAAACTaGAATATTCCCTCACTTCCA +
Preference number: 2 (lower is better)
Translates to: PGVSLTKALMTSQGSCLIHTSGN*NIPSLP
Trigger: TGGAAGTGAGGGAATATTTCAGTTTCCTGAAGTATG...AATAAGACAGCTGCCCTGTGAGGTCATAAGAGCTTTTGTGAGGCTTACTCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR TCA 90 bp CTACAGTACACAACCCACACATCAGGAGCAAGAACACATCCAATTCAAAATGTCTCCTGGCTAACATGGTaGAACCCGGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: LQYTTHTSGARTHPIQNVSWLTW*NPVSTK
Trigger: TTTAGTAGAGACCGGGTTTCACCATGTTAGCCAGGA...GACATTTTGAATTGGATGTGTTCTTGCTCCTGATGTGTGGGTTGTGTACTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR GCA 90 bp TCAAGTCCACATTTTCAAACTGGATGGTCACATTGTGGATTCCCGCATGGTGGAACAAGTTCCCAGATGTaGACTTCATGTACACTGCTA +
Preference number: 2 (lower is better)
Translates to: SSPHFQTGWSHCGFPHGGTSSQM*TSCTLL
Trigger: TAGCAGTGTACATGAAGTGCACATCTGGGAACTTGT...TCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTGAAAATGTGGACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR GCA 90 bp GTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTGGGGGACAACACAGCTaGTTAGCACAGCCCTTGGAG +
Preference number: 2 (lower is better)
Translates to: VLISLETRTSLNTVSAAIGGQHS*LAQPLE
Trigger: CTCCAAGGGCTGTGCTAAGCAGCTGTGTTGTCCCCC...AATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR GCA 90 bp GATAACTATCCAGTCTCATTGGATAGTGGGCTCATCAAATTGAGGATATTCAGGACAGAGCATGCATGCTaGAAGTCTAGTCTGGGCCTA +
Preference number: 2 (lower is better)
Translates to: DNYPVSLDSGLIKLRIFRTEHAC*KSSLGL
Trigger: TAGGCCCAGACTAGACTTGCAGCATGCATGCTCTGT...CCTGAATATCCTCAATTTGATGAGCCCACTATCCAATGAGACTGGATAGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR GCA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCAAATCTATTTATCAGCTaGTACTGCCACCAAGCAGGG +
Preference number: 2 (lower is better)
Translates to: GISTNVYVGESGPLISMPNLFIS*YCHQAG
Trigger: CCCTGCTTGGTGGCAGTAGCAGCTGATAAATAGATT...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR CCA 90 bp CAGTCAAAGAGCAGCATGAGACACCCAGGGGAATGGAAAGGAGTTAGTTACATACTCGAATTTTTGTGCTaGCATCTTGATATCCCCTGT +
Preference number: 2 (lower is better)
Translates to: QSKSSMRHPGEWKGVSYILEFLC*HLDIPC
Trigger: ACAGGGGATATCAAGATGCCAGCACAAAAATTCGAG...TATGTAACTAACTCCTTTCCATTCCCCTGGGTGTCTCATGCTGCTCTTTGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR CAA 90 bp CGTTCTGTTGACATAACATTGGTCCTCCTGAGTTTTGTTAAGACTTaGTCCGTGGTCACTCAGACAGCTATCCAAAGACACTTCAATAGC +
Preference number: 2 (lower is better)
Translates to: RSVDITLVLLSFVKT*SVVTQTAIQRHFNS
Trigger: GCTATTGAAGTGTCTTTGGATAGCTGTCTGAGTGACCACGGACAAAGTCTTAACAAAACTCAGGAGGACCAATGTTATGTCAACAGAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR TCA 90 bp GATAACTATCCAGTCTCATTGGATAGTGGGCTCATCAAATTGAGGATATTCAGGAACTGGTCCCTGAGCTaGCACACAAAATATGCCGTA +
Preference number: 2 (lower is better)
Translates to: DNYPVSLDSGLIKLRIFRNWSLS*HTKYAV
Trigger: TACGGCATATTTTGTGTGTCAGCTCAGGGACCAGTT...CCTGAATATCCTCAATTTGATGAGCCCACTATCCAATGAGACTGGATAGTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR GCA 90 bp GTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTCACAGCCCTTGGAGATaGAGGGTGAGTTGCAGAGCA +
Preference number: 2 (lower is better)
Translates to: VLISLETRTSLNTVSAAIHSPWR*RVSCRA
Trigger: TGCTCTGCAACTCACCCTGCATCTCCAAGGGCTGTG...AATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR GCA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGCAGTGTTATGCATTCTaGTATCCCAGGAATACTCTT +
Preference number: 2 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKQCYAF*YPRNTL
Trigger: AAGAGTATTCCTGGGATAGCAGAATGCATAACACTG...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR-3UTR CCA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCAAGTGCCTCGTCTATATaGTCTGATTATGTGAGTACC +
Preference number: 2 (lower is better)
Translates to: GISTNVYVGESGPLISMPSASSI*SDYVST
Trigger: GGTACTCACATAATCAGACCATATAGACGAGGCACT...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR-3UTR TCA 90 bp GATAACTATCCAGTCTCATTGGATAGTGGGCTCATCAAATTGAGGATATTCAGGAGAAAGCTCTTTTTGTaGGCCAAGCTTGTGGTTCCA +
Preference number: 2 (lower is better)
Translates to: DNYPVSLDSGLIKLRIFRRKLFL*AKLVVP
Trigger: TGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCT...CCTGAATATCCTCAATTTGATGAGCCCACTATCCAATGAGACTGGATAGTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR TCA 90 bp ACAATCTTGCAGTCTACCAGAGATGATACTAGTTGTCTAGTGAGGCACTTCCCAAAACAAGAACTTCTTTaGACACTGTATCCGCAGCTA +
Preference number: 2 (lower is better)
Translates to: TILQSTRDDTSCLVRHFPKQELL*TLYPQL
Trigger: TAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTT...TGGGAAGTGCCTCACTAGACAACTAGTATCATCTCTGGTAGACTGCAAGATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR-3UTR TCA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGAATGTATTTAAGCTATaGTCTCACCTGAGCATTAGC +
Preference number: 2 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKNVFKL*SHLSIS
Trigger: GCTAATGCTCAGGTGAGATCATAGCTTAAATACATT...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR-3UTR TCA 90 bp TCTTTGAAAGGTATGCTCATGTACATACATTACTGGGGGATTCACATGCAATTAGAGAATCTGGCCCACTaGTCTCCATGCCAAGTTTCT +
Preference number: 2 (lower is better)
Translates to: SLKGMLMYIHYWGIHMQLENLAH*SPCQVS
Trigger: AGAAACTTGGCATGGAGATCAGTGGGCCAGATTCTC...TAATTGCATGTGAATCCCCCAGTAATGTATGTACATGAGCATACCTTTCAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR GCA 90 bp GCTGCCTTCATTATCAACCCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACTACACTAGTGCAGTTTaGTTTAGAAAATGCATGTTC +
Preference number: 2 (lower is better)
Translates to: AAFIINPAPLKNPVQILNYTSAV*FRKCMF
Trigger: GAACATGCATTTTCTAAAGCAAACTGCACTAGTGTA...GTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGATAATGAAGGCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR-3UTR GCA 90 bp GATAACTATCCAGTCTCATTGGATAGTGGGCTCATCAAATTGAGGATATTCAGGTTGTTCTGTGGATGCTaGCTTCATTATCAACCCAGC +
Preference number: 2 (lower is better)
Translates to: DNYPVSLDSGLIKLRIFRLFCGC*LHYQPS
Trigger: GCTGGGTTGATAATGAAGGCAGCATCCACAGAACAA...CCTGAATATCCTCAATTTGATGAGCCCACTATCCAATGAGACTGGATAGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR TCA 90 bp TTTAAATATGATGTTTGTTCTGTGGATGCTGCCTTCATTATCAACCCAGCACCTAGAAAGCTCTTTTTGTaGGCCAAGCTTGTGGTTCCA +
Preference number: 2 (lower is better)
Translates to: FKYDVCSVDAAFIINPAPRKLFL*AKLVVP
Trigger: TGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCT...AGGTGCTGGGTTGATAATGAAGGCAGCATCCACAGAACAAACATCATATTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR-3UTR TCA 90 bp GATAACTATCCAGTCTCATTGGATAGTGGGCTCATCAAATTGAGGATATTCAGGAGCTATGATCTCACCTaGGCATTAGCTAGAAGTTCT +
Preference number: 2 (lower is better)
Translates to: DNYPVSLDSGLIKLRIFRSYDLT*ALARSS
Trigger: AGAACTTCTAGCTAATGCTCAGGTGAGATCATAGCT...CCTGAATATCCTCAATTTGATGAGCCCACTATCCAATGAGACTGGATAGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR GCA 90 bp AGTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATAACACAGAGCATGCATaGTGCAAGTCTAGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: SSNQFRNKNFFEHCIRSYNTEHA*CKSSLG
Trigger: GCCCAGACTAGACTTGCAGCATGCATGCTCTGTGTT...ATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR-3UTR GCA 90 bp GTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTAACACAGAGCATGCATaGTGCAAGTCTAGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: VLISLETRTSLNTVSAAINTEHA*CKSSLG
Trigger: GCCCAGACTAGACTTGCAGCATGCATGCTCTGTGTT...AATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR-3UTR GCA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGATTTTCAGACAATCTTaGAGTCTACCAGAGATGATA +
Preference number: 2 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKIFRQS*SLPEMI
Trigger: TATCATCTCTGGTAGACTGCAAGATTGTCTGAAAAT...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR-3UTR GCA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCACCTACGGATCATAGCTaGTTATTTATTTTAGCCTTC +
Preference number: 2 (lower is better)
Translates to: GISTNVYVGESGPLISMPPTDHS*LFILAF
Trigger: GAAGGCTAAAATAAATAAGCAGCTATGATCCGTAGG...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR-3UTR GCA 90 bp TCTTTGAAAGGTATGCTCATGTACATACATTACTGGGGGATTCACATGCAATTATTTATCAGCTGCTACTaGCACCAAGCAGGGCTGATT +
Preference number: 2 (lower is better)
Translates to: SLKGMLMYIHYWGIHMQLFISCY*HQAGLI
Trigger: AATCAGCCCTGCTTGGTGGCAGTAGCAGCTGATAAA...TAATTGCATGTGAATCCCCCAGTAATGTATGTACATGAGCATACCTTTCAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR CCA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCAATGATGTTTGTTCTGTaGATGCTGCCTTCATTATCA +
Preference number: 2 (lower is better)
Translates to: GISTNVYVGESGPLISMPMMFVL*MLPSLS
Trigger: TGATAATGAAGGCAGCATCCACAGAACAAACATCAT...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR CAA 90 bp GATTATGTGAGTACCAGATTAAAAATGCGTTCTGTTGACATAACATaGGTCCTCCTGAGTTTTGTTAAGACTTTGTCCGTGGTCACTCAG +
Preference number: 2 (lower is better)
Translates to: DYVSTRLKMRSVDIT*VLLSFVKTLSVVTQ
Trigger: CTGAGTGACCACGGACAAAGTCTTAACAAAACTCAGGAGGACCAATGTTATGTCAACAGAACGCATTTTTAATCTGGTACTCACATAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR TCA 90 bp TCTGATTATGTGAGTACCAGATTAAAAATGCGTTCTGTTGACATAACATTGGTCTCAGCTCTTCCATGTTaGCTCCTTTTGGGACCATCT +
Preference number: 2 (lower is better)
Translates to: SDYVSTRLKMRSVDITLVSALPC*LLLGPS
Trigger: AGATGGTCCCAAAAGGAGTCAACATGGAAGAGCTGA...GACCAATGTTATGTCAACAGAACGCATTTTTAATCTGGTACTCACATAATCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR GCA 90 bp TCTGATTATGTGAGTACCAGATTAAAAATGCGTTCTGTTGACATAACATTGGTCAGATGCAGGGTGAGTTaGAGAGCAACAGTAAGTCCT +
Preference number: 2 (lower is better)
Translates to: SDYVSTRLKMRSVDITLVRCRVS*RATVSP
Trigger: AGGACTTACTGTTGCTCTGCAACTCACCCTGCATCT...GACCAATGTTATGTCAACAGAACGCATTTTTAATCTGGTACTCACATAATCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR GCA 90 bp GATAACTATCCAGTCTCATTGGATAGTGGGCTCATCAAATTGAGGATATTCAGGGAAACATTCTATAGCTaGAGTTCAGTTCACAGCAGA +
Preference number: 2 (lower is better)
Translates to: DNYPVSLDSGLIKLRIFRETFYS*SSVHSR
Trigger: TCTGCTGTGAACTGAACTGCAGCTATAGAATGTTTC...CCTGAATATCCTCAATTTGATGAGCCCACTATCCAATGAGACTGGATAGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR CCA 90 bp GATAACTATCCAGTCTCATTGGATAGTGGGCTCATCAAATTGAGGATATTCAGGCTCCAGGCCATAATCTaGTATAACTGTCTATCAAGA +
Preference number: 2 (lower is better)
Translates to: DNYPVSLDSGLIKLRIFRLQAII*YNCLSR
Trigger: TCTTGATAGACAGTTATACCAGATTATGGCCTGGAG...CCTGAATATCCTCAATTTGATGAGCCCACTATCCAATGAGACTGGATAGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR TCA 90 bp TCTTTGAAAGGTATGCTCATGTACATACATTACTGGGGGATTCACATGCAATTATCATTAGCACTAAGATaGGCTGCTTACCAGGAACTA +
Preference number: 2 (lower is better)
Translates to: SLKGMLMYIHYWGIHMQLSLALR*AAYQEL
Trigger: TAGTTCCTGGTAAGCAGCTCATCTTAGTGCTAATGA...TAATTGCATGTGAATCCCCCAGTAATGTATGTACATGAGCATACCTTTCAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR GCA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGGCATCTCCCATCACATaGAAAAGTACACCTCTGATA +
Preference number: 2 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMASPIT*KSTPLI
Trigger: TATCAGAGGTGTACTTTTGCATGTGATGGGAGATGC...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR CCA 90 bp AGTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTCTTCTGGCTCATTCTaGGTGTTGAAGGAATCACCT +
Preference number: 2 (lower is better)
Translates to: SSNQFRNKNFFEHCIRSYSSGSF*VLKESP
Trigger: AGGTGATTCCTTCAACACCCAGAATGAGCCAGAAGA...ATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR TCA 90 bp AGTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATGCAAAAGTACACCTCTaGTATTCAGAGCTTCAGACT +
Preference number: 2 (lower is better)
Translates to: SSNQFRNKNFFEHCIRSYAKVHL*YSELQT
Trigger: AGTCTGAAGCTCTGAATATCAGAGGTGTACTTTTGC...ATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR TCA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGAATGTATTTAAGCTATaGTCTCACCTGAGCATTAGC +
Preference number: 2 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMNVFKL*SHLSIS
Trigger: GCTAATGCTCAGGTGAGATCATAGCTTAAATACATT...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR GCA 72 bp CCAAACAGCCAACCCCTAGTGAACACAGAGCATGCATaGTGCAAGTCTAGTCTGGGCCTACAACCCAGAAAG +
Preference number: 3 (lower is better)
Translates to: PNSQPLVNTEHA*CKSSLGLQPRK
Trigger: CTTTCTGGGTTGTAGGCCCAGACTAGACTTGCAGCATGCATGCTCTGTGTTCACTAGGGGTTGGCTGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR-3UTR CAA 90 bp CCTGGAGTAAGCCTCACAAAAGCTCTTATGACCTCACAGGGCAGCTGTCTTATTCTGTATCCGCAGCTATaGAGCCCCAGTCCCAGACTT +
Preference number: 3 (lower is better)
Translates to: PGVSLTKALMTSQGSCLILYPQL*SPSPRL
Trigger: AAGTCTGGGACTGGGGCTCAATAGCTGCGGATACAG...AATAAGACAGCTGCCCTGTGAGGTCATAAGAGCTTTTGTGAGGCTTACTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR TCA 72 bp AATGGCAGCGGTCTCCTTGATAAGCGGGAAGGCAGATaGCAAAATGATGATGACCATGAGGACAGTCAGGCT +
Preference number: 3 (lower is better)
Translates to: NGSGLLDKREGR*QNDDDHEDSQA
Trigger: AGCCTGACTGTCCTCATGGTCATCATCATTTTGTCATCTGCCTTCCCGCTTATCAAGGAGACCGCTGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR CCA 72 bp TGCTCCAGGGGTTCCTTCAAGTCCACATTTTCAAACTaGATGGTCACATTGTGGATTCCCGCATGGTGGAAG +
Preference number: 3 (lower is better)
Translates to: CSRGSFKSTFSN*MVTLWIPAWWK
Trigger: CTTCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTGAAAATGTGGACTTGAAGGAACCCCTGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR TCA 72 bp GCACAGCAGAGAGTTTACTCATCAGCTCTTCCATGTTaGCTCCTTTTGGGACCATCTGTAGCAGAATGGCAG +
Preference number: 3 (lower is better)
Translates to: AQQRVYSSALPC*LLLGPSVAEWQ
Trigger: CTGCCATTCTGCTACAGATGGTCCCAAAAGGAGTCAACATGGAAGAGCTGATGAGTAAACTCTCTGCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR CAA 90 bp ACAATCTTGCAGTCTACCAGAGATGATACTAGTTGTCTAGTGAGGCACTTCCCATTTTGTGAGCCAAGCTaGTGGTTCCAAAGTGCCTCG +
Preference number: 3 (lower is better)
Translates to: TILQSTRDDTSCLVRHFPFCEPS*WFQSAS
Trigger: CGAGGCACTTTGGAACCACAAGCTTGGCTCACAAAA...TGGGAAGTGCCTCACTAGACAACTAGTATCATCTCTGGTAGACTGCAAGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR CCA 72 bp TTTTCCCAGGTTATATGTGGCAATGTCTGGAGACATTaGTTGTCACAACTTCGGGGGACAGTACCGGCATTT +
Preference number: 3 (lower is better)
Translates to: FSQVICGNVWRH*LSQLRGTVPAF
Trigger: AAATGCCGGTACTGTCCCCCGAAGTTGTGACAACCAATGTCTCCAGACATTGCCACATATAACCTGGGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR-3UTR CAA 90 bp TCTGATTATGTGAGTACCAGATTAAAAATGCGTTCTGTTGACATAACATTGGTCAGAGAGGGCCCACCATaGTGCTCAGCACAGCCATTG +
Preference number: 3 (lower is better)
Translates to: SDYVSTRLKMRSVDITLVREGPP*CSAQPL
Trigger: CAATGGCTGTGCTGAGCACAATGGTGGGCCCTCTCT...GACCAATGTTATGTCAACAGAACGCATTTTTAATCTGGTACTCACATAATCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR TCA 72 bp TGGTGGAAGATTTCTCGAATTTTTGTGCTGGCATCTTaGTATCCCCTGTCCTTAGGATACTTGATGTGCAGG +
Preference number: 3 (lower is better)
Translates to: WWKISRIFVLAS*YPLSLGYLMCR
Trigger: CCTGCACATCAAGTATCCTAAGGACAGGGGATATCAAGATGCCAGCACAAAAATTCGAGAAATCTTCCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR TCA 72 bp AACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTaGGCCCCAGTCCCAGACTTTAATGTCCCTGATATA +
Preference number: 3 (lower is better)
Translates to: NKNFFEHCIRSY*APVPDFNVPDI
Trigger: TATATCAGGGACATTAAAGTCTGGGACTGGGGCTCAATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR GCA 72 bp CACTTTATCAGGTGCATGACTTCTATAGAGCAGGCATaGAGTCCGCGATCATTCATCCAAACTCAAAATTCA +
Preference number: 3 (lower is better)
Translates to: HFIRCMTSIEQA*SPRSFIQTQNS
Trigger: TGAATTTTGAGTTTGGATGAATGATCGCGGACTGCATGCCTGCTCTATAGAAGTCATGCACCTGATAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR CCA 72 bp TTTTCAAACTGGATGGTCACATTGTGGATTCCCGCATaGTGGAAGATTTCTCGAATTTTTGTGCTGGCATCT +
Preference number: 3 (lower is better)
Translates to: FSNWMVTLWIPA*WKISRIFVLAS
Trigger: AGATGCCAGCACAAAAATTCGAGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR CCA 72 bp TACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTTGTaGTTCCAAAGTGCCTCGTCTATATGGTCTGATTAT +
Preference number: 3 (lower is better)
Translates to: YNPESSFCEPSL*FQSASSIWSDY
Trigger: ATAATCAGACCATATAGACGAGGCACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR CCA 72 bp CTAAGGAATTTCAACCAATGTTTATGTAGGAGAATCTaGCCCACTGATCTCCATGCCAAGTTTCTTAAGAGG +
Preference number: 3 (lower is better)
Translates to: LRNFNQCLCRRI*PTDLHAKFLKR
Trigger: CCTCTTAAGAAACTTGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR-3UTR CAA 90 bp TTCCAAAGTGCCTCGTCTATATGGTCTGATTATGTGAGTACCAGATTAAAAATGATCAGCTCTTCCATGTaGACTCCTTTTGGGACCATC +
Preference number: 3 (lower is better)
Translates to: FQSASSIWSDYVSTRLKMISSSM*TPFGTI
Trigger: GATGGTCCCAAAAGGAGTCAACATGGAAGAGCTGAT...CATTTTTAATCTGGTACTCACATAATCAGACCATATAGACGAGGCACTTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR CAA 90 bp TTCCAAAGTGCCTCGTCTATATGGTCTGATTATGTGAGTACCAGATTAAAAATGCTGTCCTTAGGATACTaGATGTGCAGGGTGGCAATA +
Preference number: 3 (lower is better)
Translates to: FQSASSIWSDYVSTRLKMLSLGY*MCRVAI
Trigger: TATTGCCACCCTGCACATCAAGTATCCTAAGGACAG...CATTTTTAATCTGGTACTCACATAATCAGACCATATAGACGAGGCACTTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR CAA 90 bp TTTAAATATGATGTTTGTTCTGTGGATGCTGCCTTCATTATCAACCCAGCACCTTACTACCAACATAGTTaGGTTATGGGTCTGAATCCG +
Preference number: 3 (lower is better)
Translates to: FKYDVCSVDAAFIINPAPYYQHS*VMGLNP
Trigger: CGGATTCAGACCCATAACCAAACTATGTTGGTAGTA...AGGTGCTGGGTTGATAATGAAGGCAGCATCCACAGAACAAACATCATATTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR TCA 72 bp AAGCTTGTGGTTCCAAAGTGCCTCGTCTATATGGTCTaGTTATGTGAGTACCAGATTAAAAATGCGTTCTGT +
Preference number: 3 (lower is better)
Translates to: KLVVPKCLVYMV*LCEYQIKNAFC
Trigger: ACAGAACGCATTTTTAATCTGGTACTCACATAATCAGACCATATAGACGAGGCACTTTGGAACCACAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR CCA 72 bp TTCAAGTCCACATTTTCAAACTGGATGGTCACATTGTaGATTCCCGCATGGTGGAAGATTTCTCGAATTTTT +
Preference number: 3 (lower is better)
Translates to: FKSTFSNWMVTL*IPAWWKISRIF
Trigger: AAAAATTCGAGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTGAAAATGTGGACTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR-3UTR CAA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGGAAACAAGAACTTCTTaGAACACTGTATCCGCAGCT +
Preference number: 3 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMETRTS*NTVSAA
Trigger: AGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTC...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp AGGCCATCACTTCCGTATGTGTCTAGAGAGGGCCCACCATTGTGCTCAGCACAGAGCCGTAGGTGGCGCTaGAGCCCCGGGTGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: RPSLPYVSREGPPLCSAQSRRWR*SPGWGA
Trigger: GGCGCCCCACCCGGGGCTTCAGCGCCACCTACGGCT...CTGTGCTGAGCACAATGGTGGGCCCTCTCTAGACACATACGGAAGTGATGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR GCA 90 bp AGAGTGCAGAGTAGGTGCAGTGTCTGGCATGGCTTTGTACTAAGAGGTGACAGTCCCTCCGCCAGCTGCTaGCGCTGCTGCAGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: RVQSRCSVWHGFVLRGDSPSASC*RCCRRR
Trigger: TCGCCGCCTGCAGCAGCGGCAGCAGCTGGCGGAGGG...ACTGTCACCTCTTAGTACAAAGCCATGCCAGACACTGCACCTACTCTGCACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGAGCCGTAGGTGGCGCTaGAGCCCCGGGTGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKSRRWR*SPGWGA
Trigger: GGCGCCCCACCCGGGGCTTCAGCGCCACCTACGGCT...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp CTGGATGGTCACATTGTGGATTCCCGCATGGTGGAAGATTTCTCGAATTTTTGTGCTCGGGGTCATCGATaGGCTCGGGCCGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LDGHIVDSRMVEDFSNFCARGHR*ARAGPG
Trigger: GCCTGGCCCGGCCCGAGCGCATCGATGACCCCGAGC...ACAAAAATTCGAGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR GCA 90 bp AGGCCATCACTTCCGTATGTGTCTAGAGAGGGCCCACCATTGTGCTCAGCACAGGAGGGCCCACCATTGTaGTCAGCACAGCCATTGACG +
Preference number: 4 (lower is better)
Translates to: RPSLPYVSREGPPLCSAQEGPPL*SAQPLT
Trigger: CGTCAATGGCTGTGCTGAGCACAATGGTGGGCCCTC...CTGTGCTGAGCACAATGGTGGGCCCTCTCTAGACACATACGGAAGTGATGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CCA 90 bp ACAGAGCATGCATGCTGCAAGTCTAGTCTGGGCCTACAACCCAGAAAGCTCTTTCGGAGAGCAGCGCGATaGAGTTGCCCAGGTAGCCGG +
Preference number: 4 (lower is better)
Translates to: TEHACCKSSLGLQPRKLFRRAAR*SCPGSR
Trigger: CCGGCTACCTGGGCAACTCCATCGCGCTGCTCTCCG...AAAGAGCTTTCTGGGTTGTAGGCCCAGACTAGACTTGCAGCATGCATGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp GCTGCCTTCATTATCAACCCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACGCACAGCCATTGACGTaGGCCAGAGGCAGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: AAFIINPAPLKNPVQILNAQPLT*ARGSAP
Trigger: CGGGGCACTGCCTCTGGCTCACGTCAATGGCTGTGC...GTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGATAATGAAGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp ACATTTTCAAACTGGATGGTCACATTGTGGATTCCCGCATGGTGGAAGATTTCTGCTGCAGGCGGCGACTaGGTCCCCGGAGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: TFSNWMVTLWIPAWWKISAAGGD*VPGGST
Trigger: CGTGCTGCCTCCGGGGACGCAGTCGCCGCCTGCAGC...AGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTGAAAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CCA 90 bp TGGGCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTTGTGGTTCCAAAGTCAGGCGGCGCAGTCCTaGAAGATGAGCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: WAYNPESSFCEPSLWFQSQAAQS*KMSSPT
Trigger: GGTGGGGCTGCTCATCTTCCAGGACTGCGCCGCCTG...ACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp CTTACAAGTTCCCAGATGTGCACTTCATGTACACTGCTAATTCCAGGCACAGCACCAGGACGCCGACGATaGGCACCAGCTCGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: LTSSQMCTSCTLLIPGTAPGRRR*APARGH
Trigger: ATGACCCCGAGCTGGTGCTCATCGTCGGCGTCCTGG...TGCTGTGCCTGGAATTAGCAGTGTACATGAAGTGCACATCTGGGAACTTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR GCA 90 bp GATAACTATCCAGTCTCATTGGATAGTGGGCTCATCAAATTGAGGATATTCAGGGCTGCAGGCGGCGACTaGGTCCCCGGAGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: DNYPVSLDSGLIKLRIFRAAGGD*VPGGST
Trigger: CGTGCTGCCTCCGGGGACGCAGTCGCCGCCTGCAGC...CCTGAATATCCTCAATTTGATGAGCCCACTATCCAATGAGACTGGATAGTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CCA 90 bp CTTACAAGTTCCCAGATGTGCACTTCATGTACACTGCTAATTCCAGGCACAGCACGGAGAGCAGCGCGATaGAGTTGCCCAGGTAGCCGG +
Preference number: 4 (lower is better)
Translates to: LTSSQMCTSCTLLIPGTARRAAR*SCPGSR
Trigger: CCGGCTACCTGGGCAACTCCATCGCGCTGCTCTCCG...TGCTGTGCCTGGAATTAGCAGTGTACATGAAGTGCACATCTGGGAACTTGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CCA 90 bp CAGTCAAAGAGCAGCATGAGACACCCAGGGGAATGGAAAGGAGTTAGTTACATACAGGCGGCGCAGTCCTaGAAGATGAGCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: QSKSSMRHPGEWKGVSYIQAAQS*KMSSPT
Trigger: GGTGGGGCTGCTCATCTTCCAGGACTGCGCCGCCTG...TATGTAACTAACTCCTTTCCATTCCCCTGGGTGTCTCATGCTGCTCTTTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp AGGCCATCACTTCCGTATGTGTCTAGAGAGGGCCCACCATTGTGCTCAGCACAGGCTGCAAGTCTAGTCTaGGCCTACAACCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: RPSLPYVSREGPPLCSAQAASLV*AYNPES
Trigger: GCTTTCTGGGTTGTAGGCCCAGACTAGACTTGCAGC...CTGTGCTGAGCACAATGGTGGGCCCTCTCTAGACACATACGGAAGTGATGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR TCA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCAGCACAGCCATTGACGTaGGCCAGAGGCAGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: GISTNVYVGESGPLISMPAQPLT*ARGSAP
Trigger: CGGGGCACTGCCTCTGGCTCACGTCAATGGCTGTGC...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp CCTGGAGTAAGCCTCACAAAAGCTCTTATGACCTCACAGGGCAGCTGTCTTATTGCTCAGCACAGCCATTaGCGTGAGCCAGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PGVSLTKALMTSQGSCLIAQHSH*REPEAV
Trigger: CACTGCCTCTGGCTCACGTCAATGGCTGTGCTGAGC...AATAAGACAGCTGCCCTGTGAGGTCATAAGAGCTTTTGTGAGGCTTACTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp AGGCCATCACTTCCGTATGTGTCTAGAGAGGGCCCACCATTGTGCTCAGCACAGTTGCGTCTCTTCTACTaGGGCCATCACTTCCGTATG +
Preference number: 4 (lower is better)
Translates to: RPSLPYVSREGPPLCSAQLRLFY*GHHFRM
Trigger: CATACGGAAGTGATGGCCTCAGTAGAAGAGACGCAA...CTGTGCTGAGCACAATGGTGGGCCCTCTCTAGACACATACGGAAGTGATGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR GCA 90 bp ACAGAGCATGCATGCTGCAAGTCTAGTCTGGGCCTACAACCCAGAAAGCTCTTTGGGGGACAACACAGCTaGTTAGCACAGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: TEHACCKSSLGLQPRKLFGGQHS*LAQPLE
Trigger: CTCCAAGGGCTGTGCTAAGCAGCTGTGTTGTCCCCC...AAAGAGCTTTCTGGGTTGTAGGCCCAGACTAGACTTGCAGCATGCATGCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp CAAACTGGATGGTCACATTGTGGATTCCCGCATGGTGGAAGATTTCTCGAATTTGCAGCCGGCACGTCTTaGCAGAGTAGCGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: QTGWSHCGFPHGGRFLEFAAGTS*QSSGPS
Trigger: AGATGGGCCGCTACTCTGGCAAGACGTGCCGGCTGC...AAATTCGAGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR GCA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCAGCAGCGCGATGGAGTTaGCCAGGTAGCCGGAGACCA +
Preference number: 4 (lower is better)
Translates to: GISTNVYVGESGPLISMPAARWS*PGSRRP
Trigger: TGGTCTCCGGCTACCTGGGCAACTCCATCGCGCTGC...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGCCCTCCGCCAGCTGCTaGCGCTGCTGCAGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMPSASC*RCCRRR
Trigger: TCGCCGCCTGCAGCAGCGGCAGCAGCTGGCGGAGGG...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp GCTGCCTTCATTATCAACCCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACGAGGGCCCACCATTGTaGTCAGCACAGCCATTGACG +
Preference number: 4 (lower is better)
Translates to: AAFIINPAPLKNPVQILNEGPPL*SAQPLT
Trigger: CGTCAATGGCTGTGCTGAGCACAATGGTGGGCCCTC...GTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGATAATGAAGGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp AGAGTGCAGAGTAGGTGCAGTGTCTGGCATGGCTTTGTACTAAGAGGTGACAGTAGTCAAAGAGCAGCATaGGACACCCAGGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: RVQSRCSVWHGFVLRGDSSQRAA*DTQGNG
Trigger: TCCATTCCCCTGGGTGTCTCATGCTGCTCTTTGACT...ACTGTCACCTCTTAGTACAAAGCCATGCCAGACACTGCACCTACTCTGCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp CTACAGTACACAACCCACACATCAGGAGCAAGAACACATCCAATTCAAAATGTCGCAGCCGGCACGTCTTaGCAGAGTAGCGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: LQYTTHTSGARTHPIQNVAAGTS*QSSGPS
Trigger: AGATGGGCCGCTACTCTGGCAAGACGTGCCGGCTGC...GACATTTTGAATTGGATGTGTTCTTGCTCCTGATGTGTGGGTTGTGTACTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGGCCAGCTGCTGCCGCTaGTGCAGGCGGCGACTGCGT +
Preference number: 4 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMASCCR*CRRRLR
Trigger: ACGCAGTCGCCGCCTGCAGCAGCGGCAGCAGCTGGC...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp TGGGCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTTGTGGTTCCAAAGTATCACCTGCTACGTTTaGGAACACGGTCGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: WAYNPESSFCEPSLWFQSITCYV*EHGRPL
Trigger: AAGGGGGCGACCGTGTTCGCAAACGTAGCAGGTGAT...ACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp AGGCCATCACTTCCGTATGTGTCTAGAGAGGGCCCACCATTGTGCTCAGCACAGTTGTTCTGTGGATGCTaGCTTCATTATCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: RPSLPYVSREGPPLCSAQLFCGC*LHYQPS
Trigger: GCTGGGTTGATAATGAAGGCAGCATCCACAGAACAA...CTGTGCTGAGCACAATGGTGGGCCCTCTCTAGACACATACGGAAGTGATGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR GCA 90 bp GTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTGCCAGCTGCTGCCGCTaGTGCAGGCGGCGACTGCGT +
Preference number: 4 (lower is better)
Translates to: VLISLETRTSLNTVSAAIASCCR*CRRRLR
Trigger: ACGCAGTCGCCGCCTGCAGCAGCGGCAGCAGCTGGC...AATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp CTTACAAGTTCCCAGATGTGCACTTCATGTACACTGCTAATTCCAGGCACAGCACACAGCCCTTGGAGATaGAGGGTGAGTTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LTSSQMCTSCTLLIPGTAHSPWR*RVSCRA
Trigger: TGCTCTGCAACTCACCCTGCATCTCCAAGGGCTGTG...TGCTGTGCCTGGAATTAGCAGTGTACATGAAGTGCACATCTGGGAACTTGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CCA 90 bp AGGCCATCACTTCCGTATGTGTCTAGAGAGGGCCCACCATTGTGCTCAGCACAGCATTTTCAAACTGGATaGTCACATTGTGGATTCCCG +
Preference number: 4 (lower is better)
Translates to: RPSLPYVSREGPPLCSAQHFQTG*SHCGFP
Trigger: CGGGAATCCACAATGTGACCATCCAGTTTGAAAATG...CTGTGCTGAGCACAATGGTGGGCCCTCTCTAGACACATACGGAAGTGATGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CCA 90 bp AGAGTGCAGAGTAGGTGCAGTGTCTGGCATGGCTTTGTACTAAGAGGTGACAGTTGTGAGCCAAGCTTGTaGTTCCAAAGTGCCTCGTCT +
Preference number: 4 (lower is better)
Translates to: RVQSRCSVWHGFVLRGDSCEPSL*FQSASS
Trigger: AGACGAGGCACTTTGGAACCACAAGCTTGGCTCACA...ACTGTCACCTCTTAGTACAAAGCCATGCCAGACACTGCACCTACTCTGCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGTGTATCCGCAGCTATTaGGCCCCAGTCCCAGACTTT +
Preference number: 4 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKCIRSY*APVPDF
Trigger: AAAGTCTGGGACTGGGGCTCAATAGCTGCGGATACA...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp TTTAAATATGATGTTTGTTCTGTGGATGCTGCCTTCATTATCAACCCAGCACCTGCAGCGCGATGGAGTTaGCCAGGTAGCCGGAGACCA +
Preference number: 4 (lower is better)
Translates to: FKYDVCSVDAAFIINPAPAARWS*PGSRRP
Trigger: TGGTCTCCGGCTACCTGGGCAACTCCATCGCGCTGC...AGGTGCTGGGTTGATAATGAAGGCAGCATCCACAGAACAAACATCATATTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp CTACAGTACACAACCCACACATCAGGAGCAAGAACACATCCAATTCAAAATGTCGGGGGACAACACAGCTaGTTAGCACAGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LQYTTHTSGARTHPIQNVGGQHS*LAQPLE
Trigger: CTCCAAGGGCTGTGCTAAGCAGCTGTGTTGTCCCCC...GACATTTTGAATTGGATGTGTTCTTGCTCCTGATGTGTGGGTTGTGTACTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp ACAGAGCATGCATGCTGCAAGTCTAGTCTGGGCCTACAACCCAGAAAGCTCTTTTCTATAGAGCAGGCATaGAGTCCGCGATCATTCATC +
Preference number: 4 (lower is better)
Translates to: TEHACCKSSLGLQPRKLFSIEQA*SPRSFI
Trigger: GATGAATGATCGCGGACTGCATGCCTGCTCTATAGA...AAAGAGCTTTCTGGGTTGTAGGCCCAGACTAGACTTGCAGCATGCATGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CCA 90 bp GCTGCCTTCATTATCAACCCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACTGGATGGTCACATTGTaGATTCCCGCATGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: AAFIINPAPLKNPVQILNWMVTL*IPAWWK
Trigger: CTTCCACCATGCGGGAATCCACAATGTGACCATCCA...GTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGATAATGAAGGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
3UTR CAA 72 bp TTTGGGACCATCTGTAGCAGAATGGCAGCGGTCTCCTaGATAAGCGGGAAGGCAGATGACAAAATGATGATG +
Preference number: 4 (lower is better)
Translates to: FGTICSRMAAVS*ISGKADDKMMM
Trigger: CATCATCATTTTGTCATCTGCCTTCCCGCTTATCAAGGAGACCGCTGCCATTCTGCTACAGATGGTCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR TCA 90 bp GTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTCCAGGACGCCGACGATaGGCACCAGCTCGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: VLISLETRTSLNTVSAAIPGRRR*APARGH
Trigger: ATGACCCCGAGCTGGTGCTCATCGTCGGCGTCCTGG...AATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp CCTGGAGTAAGCCTCACAAAAGCTCTTATGACCTCACAGGGCAGCTGTCTTATTGTTGAAGGAATCACCTaGTACGTTTGCGAACACGGT +
Preference number: 4 (lower is better)
Translates to: PGVSLTKALMTSQGSCLIVEGIT*YVCEHG
Trigger: ACCGTGTTCGCAAACGTAGCAGGTGATTCCTTCAAC...AATAAGACAGCTGCCCTGTGAGGTCATAAGAGCTTTTGTGAGGCTTACTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp CTACAGTACACAACCCACACATCAGGAGCAAGAACACATCCAATTCAAAATGTCCACAGCCCTTGGAGATaGAGGGTGAGTTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LQYTTHTSGARTHPIQNVHSPWR*RVSCRA
Trigger: TGCTCTGCAACTCACCCTGCATCTCCAAGGGCTGTG...GACATTTTGAATTGGATGTGTTCTTGCTCCTGATGTGTGGGTTGTGTACTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp ACCATCTGTAGCAGAATGGCAGCGGTCTCCTTGATAAGCGGGAAGGCAGATGACCAGTGTTATGCATTCTaGTATCCCAGGAATACTCTT +
Preference number: 4 (lower is better)
Translates to: TICSRMAAVSLISGKADDQCYAF*YPRNTL
Trigger: AAGAGTATTCCTGGGATAGCAGAATGCATAACACTG...GTCATCTGCCTTCCCGCTTATCAAGGAGACCGCTGCCATTCTGCTACAGATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR GCA 90 bp ACAATCTTGCAGTCTACCAGAGATGATACTAGTTGTCTAGTGAGGCACTTCCCAAAGTTCTGCTACGTTTaGGAACACGGTCGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: TILQSTRDDTSCLVRHFPKFCYV*EHGRPL
Trigger: AAGGGGGCGACCGTGTTCGCAAACGTAGCAGAACTT...TGGGAAGTGCCTCACTAGACAACTAGTATCATCTCTGGTAGACTGCAAGATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CCA 90 bp CCTGGAGTAAGCCTCACAAAAGCTCTTATGACCTCACAGGGCAGCTGTCTTATTTTATGTAGGAGAATCTaGCCCACTGATCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: PGVSLTKALMTSQGSCLILCRRI*PTDLHA
Trigger: GGCATGGAGATCAGTGGGCCAGATTCTCCTACATAA...AATAAGACAGCTGCCCTGTGAGGTCATAAGAGCTTTTGTGAGGCTTACTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp TTCCAAAGTGCCTCGTCTATATGGTCTGATTATGTGAGTACCAGATTAAAAATGGCTCAGCACAGCCATTaGCGTGAGCCAGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: FQSASSIWSDYVSTRLKMAQHSH*REPEAV
Trigger: CACTGCCTCTGGCTCACGTCAATGGCTGTGCTGAGC...CATTTTTAATCTGGTACTCACATAATCAGACCATATAGACGAGGCACTTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR TCA 90 bp ACAATCTTGCAGTCTACCAGAGATGATACTAGTTGTCTAGTGAGGCACTTCCCATTGCGTCTCTTCTACTaGGGCCATCACTTCCGTATG +
Preference number: 4 (lower is better)
Translates to: TILQSTRDDTSCLVRHFPLRLFY*GHHFRM
Trigger: CATACGGAAGTGATGGCCTCAGTAGAAGAGACGCAA...TGGGAAGTGCCTCACTAGACAACTAGTATCATCTCTGGTAGACTGCAAGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp GCTGCCTTCATTATCAACCCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGAAAGCTCTTTTTGTaGGCCAAGCTTGTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: AAFIINPAPLKNPVQILNRKLFL*AKLVVP
Trigger: TGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCT...GTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGATAATGAAGGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp CCTGGAGTAAGCCTCACAAAAGCTCTTATGACCTCACAGGGCAGCTGTCTTATTACCCTGTGCAGATTCTaGACAGGACTTTACACACTA +
Preference number: 4 (lower is better)
Translates to: PGVSLTKALMTSQGSCLITLCRF*TGLYTL
Trigger: TAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGT...AATAAGACAGCTGCCCTGTGAGGTCATAAGAGCTTTTGTGAGGCTTACTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCAGAGAATCTGGCCCACTaGTCTCCATGCCAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: GISTNVYVGESGPLISMPENLAH*SPCQVS
Trigger: AGAAACTTGGCATGGAGATCAGTGGGCCAGATTCTC...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGAGGACAACTGGTCCCTaGGCTGACACACAAAATATG +
Preference number: 4 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKRTTGP*ADTQNM
Trigger: CATATTTTGTGTGTCAGCTCAGGGACCAGTTGTCCT...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp ACAATCTTGCAGTCTACCAGAGATGATACTAGTTGTCTAGTGAGGCACTTCCCATCACAAAAGCTCTTATaGCCTCACAGGGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TILQSTRDDTSCLVRHFPSQKLL*PHRAAV
Trigger: GACAGCTGCCCTGTGAGGTCATAAGAGCTTTTGTGA...TGGGAAGTGCCTCACTAGACAACTAGTATCATCTCTGGTAGACTGCAAGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp TCAAGTCCACATTTTCAAACTGGATGGTCACATTGTGGATTCCCGCATGGTGGAGCTCATTCTGGGTGTTaGAGGAATCACCTGCATTCA +
Preference number: 4 (lower is better)
Translates to: SSPHFQTGWSHCGFPHGGAHSGC*RNHLHS
Trigger: TGAATGCAGGTGATTCCTTCAACACCCAGAATGAGC...TCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTGAAAATGTGGACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR GCA 90 bp AGAGTGCAGAGTAGGTGCAGTGTCTGGCATGGCTTTGTACTAAGAGGTGACAGTGCATCTCCCATCACATaGAAAAGTACACCTCTGATA +
Preference number: 4 (lower is better)
Translates to: RVQSRCSVWHGFVLRGDSASPIT*KSTPLI
Trigger: TATCAGAGGTGTACTTTTGCATGTGATGGGAGATGC...ACTGTCACCTCTTAGTACAAAGCCATGCCAGACACTGCACCTACTCTGCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGAGATGCAGGGTGAGTTaGAGAGCAACAGTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKRCRVS*RATVSP
Trigger: AGGACTTACTGTTGCTCTGCAACTCACCCTGCATCT...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp ACAATCTTGCAGTCTACCAGAGATGATACTAGTTGTCTAGTGAGGCACTTCCCAACAGAGCATGCATGCTaGAAGTCTAGTCTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: TILQSTRDDTSCLVRHFPTEHAC*KSSLGL
Trigger: TAGGCCCAGACTAGACTTGCAGCATGCATGCTCTGT...TGGGAAGTGCCTCACTAGACAACTAGTATCATCTCTGGTAGACTGCAAGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCAAACACAGAGCATGCATaGTGCAAGTCTAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GISTNVYVGESGPLISMPNTEHA*CKSSLG
Trigger: GCCCAGACTAGACTTGCAGCATGCATGCTCTGTGTT...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGTTATGTAGGAGAATCTaGCCCACTGATCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKLCRRI*PTDLHA
Trigger: GGCATGGAGATCAGTGGGCCAGATTCTCCTACATAA...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp ACAATCTTGCAGTCTACCAGAGATGATACTAGTTGTCTAGTGAGGCACTTCCCATCACAGTGCCACAGGTaGCAAATGCAAGCCACTCAA +
Preference number: 4 (lower is better)
Translates to: TILQSTRDDTSCLVRHFPSQCHR*QMQATQ
Trigger: TTGAGTGGCTTGCATTTGCCACCTGTGGCACTGTGA...TGGGAAGTGCCTCACTAGACAACTAGTATCATCTCTGGTAGACTGCAAGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR CAA 72 bp GCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTaGTGGTTCCAAAGTGCCTCGTCTATATGGTCTGAT +
Preference number: 4 (lower is better)
Translates to: AYNPESSFCEPS*WFQSASSIWSD
Trigger: ATCAGACCATATAGACGAGGCACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp ACAGAGCATGCATGCTGCAAGTCTAGTCTGGGCCTACAACCCAGAAAGCTCTTTCATACTTCAGGAAACTaGAATATTCCCTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: TEHACCKSSLGLQPRKLFHTSGN*NIPSLP
Trigger: TGGAAGTGAGGGAATATTTCAGTTTCCTGAAGTATG...AAAGAGCTTTCTGGGTTGTAGGCCCAGACTAGACTTGCAGCATGCATGCTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp CTACAGTACACAACCCACACATCAGGAGCAAGAACACATCCAATTCAAAATGTCTCAACCCAGCACCTCTaGAAAACCCTGTGCAGATTC +
Preference number: 4 (lower is better)
Translates to: LQYTTHTSGARTHPIQNVSTQHL*KTLCRF
Trigger: GAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGA...GACATTTTGAATTGGATGTGTTCTTGCTCCTGATGTGTGGGTTGTGTACTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp AGAGTGCAGAGTAGGTGCAGTGTCTGGCATGGCTTTGTACTAAGAGGTGACAGTATCAGCACAGAAGAGTaGGACCAAATGCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RVQSRCSVWHGFVLRGDSISTEE*DQMLFL
Trigger: AAGAAAAAGCATTTGGTCTCACTCTTCTGTGCTGAT...ACTGTCACCTCTTAGTACAAAGCCATGCCAGACACTGCACCTACTCTGCACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp TGGGCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTTGTGGTTCCAAAGTAGAAGCACAAATACGTaGCACTTTATCAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: WAYNPESSFCEPSLWFQSRSTNT*HFIRCM
Trigger: CATGCACCTGATAAAGTGTCACGTATTTGTGCTTCT...ACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp ACAGAGCATGCATGCTGCAAGTCTAGTCTGGGCCTACAACCCAGAAAGCTCTTTACTAAATTCCTGGTTTaGCAACCTCATTTCTACCTG +
Preference number: 4 (lower is better)
Translates to: TEHACCKSSLGLQPRKLFTKFLV*QPHFYL
Trigger: CAGGTAGAAATGAGGTTGTCAAACCAGGAATTTAGT...AAAGAGCTTTCTGGGTTGTAGGCCCAGACTAGACTTGCAGCATGCATGCTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp ACAGAGCATGCATGCTGCAAGTCTAGTCTGGGCCTACAACCCAGAAAGCTCTTTTTTCTCGAATTTTTGTaGTGGCATCTTGATATCCCC +
Preference number: 4 (lower is better)
Translates to: TEHACCKSSLGLQPRKLFFLEFL*WHLDIP
Trigger: GGGGATATCAAGATGCCAGCACAAAAATTCGAGAAA...AAAGAGCTTTCTGGGTTGTAGGCCCAGACTAGACTTGCAGCATGCATGCTCTGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp CTACAGTACACAACCCACACATCAGGAGCAAGAACACATCCAATTCAAAATGTCAACACAGAGCATGCATaGTGCAAGTCTAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LQYTTHTSGARTHPIQNVNTEHA*CKSSLG
Trigger: GCCCAGACTAGACTTGCAGCATGCATGCTCTGTGTT...GACATTTTGAATTGGATGTGTTCTTGCTCCTGATGTGTGGGTTGTGTACTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp ACCATCTGTAGCAGAATGGCAGCGGTCTCCTTGATAAGCGGGAAGGCAGATGACGTTTGCTTTAGAAAATaGATGTTCAAGCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: TICSRMAAVSLISGKADDVCFRK*MFKLKQ
Trigger: CTGTTTCAGCTTGAACATGCATTTTCTAAAGCAAAC...GTCATCTGCCTTCCCGCTTATCAAGGAGACCGCTGCCATTCTGCTACAGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR GCA 90 bp GCTGCCTTCATTATCAACCCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACTGTTTGTTCTGTGGATaGTGCCTTCATTATCAACCC +
Preference number: 4 (lower is better)
Translates to: AAFIINPAPLKNPVQILNCLFCG*CLHYQP
Trigger: GGGTTGATAATGAAGGCAGCATCCACAGAACAAACA...GTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGATAATGAAGGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp ACAATCTTGCAGTCTACCAGAGATGATACTAGTTGTCTAGTGAGGCACTTCCCATTTATCAGCTGCTACTaGCACCAAGCAGGGCTGATT +
Preference number: 4 (lower is better)
Translates to: TILQSTRDDTSCLVRHFPFISCY*HQAGLI
Trigger: AATCAGCCCTGCTTGGTGGCAGTAGCAGCTGATAAA...TGGGAAGTGCCTCACTAGACAACTAGTATCATCTCTGGTAGACTGCAAGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CCA 90 bp GCTGCCTTCATTATCAACCCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACTTGTGGATTCCCGCATaGTGGAAGATTTCTCGAATT +
Preference number: 4 (lower is better)
Translates to: AAFIINPAPLKNPVQILNLWIPA*WKISRI
Trigger: AATTCGAGAAATCTTCCACCATGCGGGAATCCACAA...GTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGATAATGAAGGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp CTACAGTACACAACCCACACATCAGGAGCAAGAACACATCCAATTCAAAATGTCTGGATGGTCACATTGTaGATTCCCGCATGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LQYTTHTSGARTHPIQNVWMVTL*IPAWWK
Trigger: CTTCCACCATGCGGGAATCCACAATGTGACCATCCA...GACATTTTGAATTGGATGTGTTCTTGCTCCTGATGTGTGGGTTGTGTACTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CCA 90 bp GCTGCCTTCATTATCAACCCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGTGCCTCGTCTATATaGTCTGATTATGTGAGTACC +
Preference number: 4 (lower is better)
Translates to: AAFIINPAPLKNPVQILNSASSI*SDYVST
Trigger: GGTACTCACATAATCAGACCATATAGACGAGGCACT...GTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGATAATGAAGGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGAGTAGGTGCAGTGTCTaGCATGGCTTTGTACTAAGA +
Preference number: 4 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKSRCSV*HGFVLR
Trigger: TCTTAGTACAAAGCCATGCCAGACACTGCACCTACT...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR CAA 72 bp AGAGGTCACTCTCCCTTGAAAATCATCCTTTCCGGATaGTTCTCATTAGAGTGCAGAGTAGGTGCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: RGHSPLKIILSG*FSLECRVGAVS
Trigger: AGACACTGCACCTACTCTGCACTCTAATGAGAACAATCCGGAAAGGATGATTTTCAAGGGAGAGTGACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp TGGGCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTTGTGGTTCCAAAGTAAAAATGCGTTCTGTTaGCATAACATTGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: WAYNPESSFCEPSLWFQSKNAFC*HNIGPP
Trigger: AGGAGGACCAATGTTATGTCAACAGAACGCATTTTT...ACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCAAGAAAGCTCTTTTTGTaGGCCAAGCTTGTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: GISTNVYVGESGPLISMPRKLFL*AKLVVP
Trigger: TGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCT...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp CAGTCAAAGAGCAGCATGAGACACCCAGGGGAATGGAAAGGAGTTAGTTACATAAACTTGCCTCTTTTATaGTCGTTAAGGGGATTGGGA +
Preference number: 4 (lower is better)
Translates to: QSKSSMRHPGEWKGVSYINLPLL*SLRGLG
Trigger: TCCCAATCCCCTTAACGATCATAAAAGAGGCAAGTT...TATGTAACTAACTCCTTTCCATTCCCCTGGGTGTCTCATGCTGCTCTTTGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp GCTGCCTTCATTATCAACCCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACGTGGGCTCATCAAATTaGGGATATTCAGGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: AAFIINPAPLKNPVQILNVGSSN*GYSGVK
Trigger: TTTAACTCCTGAATATCCTCAATTTGATGAGCCCAC...GTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGATAATGAAGGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp TCCTTAGGATACTTGATGTGCAGGGTGGCAATAATCTTTCCACTTACAAGTTCCAACAGTAAGTCCTTCTaGTCCAGGGGTTCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SLGYLMCRVAIIFPLTSSNSKSF*SRGSFK
Trigger: CTTGAAGGAACCCCTGGAGCAGAAGGACTTACTGTT...GGAACTTGTAAGTGGAAAGATTATTGCCACCCTGCACATCAAGTATCCTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR GCA 90 bp ACAATCTTGCAGTCTACCAGAGATGATACTAGTTGTCTAGTGAGGCACTTCCCATTGTTCTGTGGATGCTaGCTTCATTATCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: TILQSTRDDTSCLVRHFPLFCGC*LHYQPS
Trigger: GCTGGGTTGATAATGAAGGCAGCATCCACAGAACAA...TGGGAAGTGCCTCACTAGACAACTAGTATCATCTCTGGTAGACTGCAAGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp ACAGAGCATGCATGCTGCAAGTCTAGTCTGGGCCTACAACCCAGAAAGCTCTTTCCTACGGATCATAGCTaGTTATTTATTTTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: TEHACCKSSLGLQPRKLFPTDHS*LFILAF
Trigger: GAAGGCTAAAATAAATAAGCAGCTATGATCCGTAGG...AAAGAGCTTTCTGGGTTGTAGGCCCAGACTAGACTTGCAGCATGCATGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp GATAACTATCCAGTCTCATTGGATAGTGGGCTCATCAAATTGAGGATATTCAGGAGAGTGCAGAGTAGGTaGAGTGTCTGGCATGGCTTT +
Preference number: 4 (lower is better)
Translates to: DNYPVSLDSGLIKLRIFRRVQSR*SVWHGF
Trigger: AAAGCCATGCCAGACACTGCACCTACTCTGCACTCT...CCTGAATATCCTCAATTTGATGAGCCCACTATCCAATGAGACTGGATAGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CCA 90 bp ACAATCTTGCAGTCTACCAGAGATGATACTAGTTGTCTAGTGAGGCACTTCCCATCTTCTGGCTCATTCTaGGTGTTGAAGGAATCACCT +
Preference number: 4 (lower is better)
Translates to: TILQSTRDDTSCLVRHFPSSGSF*VLKESP
Trigger: AGGTGATTCCTTCAACACCCAGAATGAGCCAGAAGA...TGGGAAGTGCCTCACTAGACAACTAGTATCATCTCTGGTAGACTGCAAGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp TGGGCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTTGTGGTTCCAAAGTTTTCATCATGTCTTCTaGCTCATTCTGGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: WAYNPESSFCEPSLWFQSFHHVF*LILGVE
Trigger: TTCAACACCCAGAATGAGCCAGAAGACATGATGAAA...ACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCATTAAGACTTTGTCCGTaGTCACTCAGACAGCTATCC +
Preference number: 4 (lower is better)
Translates to: GISTNVYVGESGPLISMPLRLCP*SLRQLS
Trigger: GGATAGCTGTCTGAGTGACCACGGACAAAGTCTTAA...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGGTTCTCCCAGTGCTTTaGGAGGCCAAGGCGAGAGAA +
Preference number: 4 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMVLPVL*EAKARE
Trigger: TTCTCTCGCCTTGGCCTCCCAAAGCACTGGGAGAAC...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp ACAATCTTGCAGTCTACCAGAGATGATACTAGTTGTCTAGTGAGGCACTTCCCACAACAATGGAGCCTGTaGGTATTCATAATGGCCCAA +
Preference number: 4 (lower is better)
Translates to: TILQSTRDDTSCLVRHFPQQWSL*VFIMAQ
Trigger: TTGGGCCATTATGAATACCCACAGGCTCCATTGTTG...TGGGAAGTGCCTCACTAGACAACTAGTATCATCTCTGGTAGACTGCAAGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CCA 90 bp CTACAGTACACAACCCACACATCAGGAGCAAGAACACATCCAATTCAAAATGTCAATGTCTGGAGACATTaGTTGTCACAACTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: LQYTTHTSGARTHPIQNVNVWRH*LSQLRG
Trigger: CCCCCGAAGTTGTGACAACCAATGTCTCCAGACATT...GACATTTTGAATTGGATGTGTTCTTGCTCCTGATGTGTGGGTTGTGTACTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CCA 90 bp TGGGCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTTGTGGTTCCAAAGTATATGTGGCAATGTCTaGAGACATTGGTTGTCACAA +
Preference number: 4 (lower is better)
Translates to: WAYNPESSFCEPSLWFQSICGNV*RHWLSQ
Trigger: TTGTGACAACCAATGTCTCCAGACATTGCCACATAT...ACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR CAA 72 bp GACATAACATTGGTCCTCCTGAGTTTTGTTAAGACTTaGTCCGTGGTCACTCAGACAGCTATCCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: DITLVLLSFVKT*SVVTQTAIQRH
Trigger: GTGTCTTTGGATAGCTGTCTGAGTGACCACGGACAAAGTCTTAACAAAACTCAGGAGGACCAATGTTATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR TCA 90 bp TTTAAATATGATGTTTGTTCTGTGGATGCTGCCTTCATTATCAACCCAGCACCTGCTCATTCTGGGTGTTaGAGGAATCACCTGCTACGT +
Preference number: 4 (lower is better)
Translates to: FKYDVCSVDAAFIINPAPAHSGC*RNHLLR
Trigger: ACGTAGCAGGTGATTCCTTCAACACCCAGAATGAGC...AGGTGCTGGGTTGATAATGAAGGCAGCATCCACAGAACAAACATCATATTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp ACAATCTTGCAGTCTACCAGAGATGATACTAGTTGTCTAGTGAGGCACTTCCCAGCAAAAGTACACCTCTaGTATTCAGAGCTTCAGACT +
Preference number: 4 (lower is better)
Translates to: TILQSTRDDTSCLVRHFPAKVHL*YSELQT
Trigger: AGTCTGAAGCTCTGAATATCAGAGGTGTACTTTTGC...TGGGAAGTGCCTCACTAGACAACTAGTATCATCTCTGGTAGACTGCAAGATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp CAAACTGGATGGTCACATTGTGGATTCCCGCATGGTGGAAGATTTCTCGAATTTAGCTATGATCTCACCTaGGCATTAGCTAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: QTGWSHCGFPHGGRFLEFSYDLT*ALARSS
Trigger: AGAACTTCTAGCTAATGCTCAGGTGAGATCATAGCT...AAATTCGAGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR TCA 90 bp TGGGCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTTGTGGTTCCAAAGTAATGTATTTAAGCTATaGTCTCACCTGAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: WAYNPESSFCEPSLWFQSNVFKL*SHLSIS
Trigger: GCTAATGCTCAGGTGAGATCATAGCTTAAATACATT...ACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp GATAACTATCCAGTCTCATTGGATAGTGGGCTCATCAAATTGAGGATATTCAGGGAGGTCACTCTCCCTTaGAAATCATCCTTTCCGGAT +
Preference number: 4 (lower is better)
Translates to: DNYPVSLDSGLIKLRIFREVTLP*KSSFPD
Trigger: ATCCGGAAAGGATGATTTTCAAGGGAGAGTGACCTC...CCTGAATATCCTCAATTTGATGAGCCCACTATCCAATGAGACTGGATAGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp GATAACTATCCAGTCTCATTGGATAGTGGGCTCATCAAATTGAGGATATTCAGGAACAGTAAGTCCTTCTaGTCCAGGGGTTCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: DNYPVSLDSGLIKLRIFRNSKSF*SRGSFK
Trigger: CTTGAAGGAACCCCTGGAGCAGAAGGACTTACTGTT...CCTGAATATCCTCAATTTGATGAGCCCACTATCCAATGAGACTGGATAGTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp ACAATCTTGCAGTCTACCAGAGATGATACTAGTTGTCTAGTGAGGCACTTCCCATGTTTGTTCTGTGGATaGTGCCTTCATTATCAACCC +
Preference number: 4 (lower is better)
Translates to: TILQSTRDDTSCLVRHFPCLFCG*CLHYQP
Trigger: GGGTTGATAATGAAGGCAGCATCCACAGAACAAACA...TGGGAAGTGCCTCACTAGACAACTAGTATCATCTCTGGTAGACTGCAAGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp AGTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTTGTCTCGCCGGCCCTaGCCCACCGCTTTTTATAAC +
Preference number: 4 (lower is better)
Translates to: SSNQFRNKNFFEHCIRSYLSRRP*PTAFYN
Trigger: GTTATAAAAAGCGGTGGGGCAGGGCCGGCGAGACAA...ATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CCA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCACTCGAATTTTTGTGCTaGCATCTTGATATCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GISTNVYVGESGPLISMPLEFLC*HLDIPC
Trigger: ACAGGGGATATCAAGATGCCAGCACAAAAATTCGAG...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp CAGTCAAAGAGCAGCATGAGACACCCAGGGGAATGGAAAGGAGTTAGTTACATATGGATTCCCGCATGGTaGAAGATTTCTCGAATTTTT +
Preference number: 4 (lower is better)
Translates to: QSKSSMRHPGEWKGVSYIWIPAW*KISRIF
Trigger: AAAAATTCGAGAAATCTTCCACCATGCGGGAATCCA...TATGTAACTAACTCCTTTCCATTCCCCTGGGTGTCTCATGCTGCTCTTTGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp TGGGCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTTGTGGTTCCAAAGTTCCACATTTTCAAACTaGATGGTCACATTGTGGATT +
Preference number: 4 (lower is better)
Translates to: WAYNPESSFCEPSLWFQSSTFSN*MVTLWI
Trigger: AATCCACAATGTGACCATCCAGTTTGAAAATGTGGA...ACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp TGGGCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTTGTGGTTCCAAAGTTTCTCATTTCTCCCTTaGGCATCAACTTTTTCATTG +
Preference number: 4 (lower is better)
Translates to: WAYNPESSFCEPSLWFQSFSFLP*ASTFSL
Trigger: CAATGAAAAAGTTGATGCCCAAGGGAGAAATGAGAA...ACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp GCTGCCTTCATTATCAACCCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACATGATGTTTGTTCTGTaGATGCTGCCTTCATTATCA +
Preference number: 4 (lower is better)
Translates to: AAFIINPAPLKNPVQILNMMFVL*MLPSLS
Trigger: TGATAATGAAGGCAGCATCCACAGAACAAACATCAT...GTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGATAATGAAGGCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp GTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTGTTCTCCCAGTGCTTTaGGAGGCCAAGGCGAGAGAA +
Preference number: 4 (lower is better)
Translates to: VLISLETRTSLNTVSAAIVLPVL*EAKARE
Trigger: TTCTCTCGCCTTGGCCTCCCAAAGCACTGGGAGAAC...AATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp TGGGCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTTGTGGTTCCAAAGTATTTTCTGTCAACAATaGAGCCTGTGGGTATTCATA +
Preference number: 4 (lower is better)
Translates to: WAYNPESSFCEPSLWFQSIFCQQ*SLWVFI
Trigger: TATGAATACCCACAGGCTCCATTGTTGACAGAAAAT...ACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CCA 90 bp ACAGAGCATGCATGCTGCAAGTCTAGTCTGGGCCTACAACCCAGAAAGCTCTTTTATCTAAACTCCAGATaGGTAAGAACATGCAGATTA +
Preference number: 4 (lower is better)
Translates to: TEHACCKSSLGLQPRKLFYLNSR*VRTCRL
Trigger: TAATCTGCATGTTCTTACCCATCTGGAGTTTAGATA...AAAGAGCTTTCTGGGTTGTAGGCCCAGACTAGACTTGCAGCATGCATGCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR CAA 72 bp ATGGTGGAAGATTTCTCGAATTTTTGTGCTGGCATCTaGATATCCCCTGTCCTTAGGATACTTGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: MVEDFSNFCAGI*ISPVLRILDVQ
Trigger: CTGCACATCAAGTATCCTAAGGACAGGGGATATCAAGATGCCAGCACAAAAATTCGAGAAATCTTCCACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356609.2
3UTR CAA 72 bp TCCTTCAAGTCCACATTTTCAAACTGGATGGTCACATaGTGGATTCCCGCATGGTGGAAGATTTCTCGAATT +
Preference number: 4 (lower is better)
Translates to: SFKSTFSNWMVT*WIPAWWKISRI
Trigger: AATTCGAGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTGAAAATGTGGACTTGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR TCA 90 bp TTTAAATATGATGTTTGTTCTGTGGATGCTGCCTTCATTATCAACCCAGCACCTTCAGCTCTTCCATGTTaGCTCCTTTTGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: FKYDVCSVDAAFIINPAPSALPC*LLLGPS
Trigger: AGATGGTCCCAAAAGGAGTCAACATGGAAGAGCTGA...AGGTGCTGGGTTGATAATGAAGGCAGCATCCACAGAACAAACATCATATTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCAAAAAATGCGTTCTGTTaGCATAACATTGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GISTNVYVGESGPLISMPKNAFC*HNIGPP
Trigger: AGGAGGACCAATGTTATGTCAACAGAACGCATTTTT...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp TCTGATTATGTGAGTACCAGATTAAAAATGCGTTCTGTTGACATAACATTGGTCAGTCAAAGAGCAGCATaGGACACCCAGGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: SDYVSTRLKMRSVDITLVSQRAA*DTQGNG
Trigger: TCCATTCCCCTGGGTGTCTCATGCTGCTCTTTGACT...GACCAATGTTATGTCAACAGAACGCATTTTTAATCTGGTACTCACATAATCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR TCA 90 bp GTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTTGTATCCGCAGCTATTaGGCCCCAGTCCCAGACTTT +
Preference number: 4 (lower is better)
Translates to: VLISLETRTSLNTVSAAICIRSY*APVPDF
Trigger: AAAGTCTGGGACTGGGGCTCAATAGCTGCGGATACA...AATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp CTTACAAGTTCCCAGATGTGCACTTCATGTACACTGCTAATTCCAGGCACAGCAAATGTATTTAAGCTATaGTCTCACCTGAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: LTSSQMCTSCTLLIPGTANVFKL*SHLSIS
Trigger: GCTAATGCTCAGGTGAGATCATAGCTTAAATACATT...TGCTGTGCCTGGAATTAGCAGTGTACATGAAGTGCACATCTGGGAACTTGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR TCA 90 bp ACATTTTCAAACTGGATGGTCACATTGTGGATTCCCGCATGGTGGAAGATTTCTAACTTGCCTCTTTTATaGTCGTTAAGGGGATTGGGA +
Preference number: 4 (lower is better)
Translates to: TFSNWMVTLWIPAWWKISNLPLL*SLRGLG
Trigger: TCCCAATCCCCTTAACGATCATAAAAGAGGCAAGTT...AGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTGAAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR TCA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGGAGAATCTGGCCCACTaGTCTCCATGCCAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMENLAH*SPCQVS
Trigger: AGAAACTTGGCATGGAGATCAGTGGGCCAGATTCTC...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp CTACAGTACACAACCCACACATCAGGAGCAAGAACACATCCAATTCAAAATGTCTCATTAGCACTAAGATaGGCTGCTTACCAGGAACTA +
Preference number: 4 (lower is better)
Translates to: LQYTTHTSGARTHPIQNVSLALR*AAYQEL
Trigger: TAGTTCCTGGTAAGCAGCTCATCTTAGTGCTAATGA...GACATTTTGAATTGGATGTGTTCTTGCTCCTGATGTGTGGGTTGTGTACTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp CAGTCAAAGAGCAGCATGAGACACCCAGGGGAATGGAAAGGAGTTAGTTACATATTAGGATACTTGATGTaGAGGGTGGCAATAATCTTT +
Preference number: 4 (lower is better)
Translates to: QSKSSMRHPGEWKGVSYILGYLM*RVAIIF
Trigger: AAAGATTATTGCCACCCTGCACATCAAGTATCCTAA...TATGTAACTAACTCCTTTCCATTCCCCTGGGTGTCTCATGCTGCTCTTTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp ACAATCTTGCAGTCTACCAGAGATGATACTAGTTGTCTAGTGAGGCACTTCCCATTTCTCGAATTTTTGTaGTGGCATCTTGATATCCCC +
Preference number: 4 (lower is better)
Translates to: TILQSTRDDTSCLVRHFPFLEFL*WHLDIP
Trigger: GGGGATATCAAGATGCCAGCACAAAAATTCGAGAAA...TGGGAAGTGCCTCACTAGACAACTAGTATCATCTCTGGTAGACTGCAAGATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGACAGAGCATGCATGCTaGAAGTCTAGTCTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMTEHAC*KSSLGL
Trigger: TAGGCCCAGACTAGACTTGCAGCATGCATGCTCTGT...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCAGAAACATTCTATAGCTaGAGTTCAGTTCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: GISTNVYVGESGPLISMPETFYS*SSVHSR
Trigger: TCTGCTGTGAACTGAACTGCAGCTATAGAATGTTTC...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGCCTACGGATCATAGCTaGTTATTTATTTTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKPTDHS*LFILAF
Trigger: GAAGGCTAAAATAAATAAGCAGCTATGATCCGTAGG...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp TGGGCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTTGTGGTTCCAAAGTATTCCTTCAGCCAGTTaGACAAAAACTGTGAAATTA +
Preference number: 4 (lower is better)
Translates to: WAYNPESSFCEPSLWFQSIPSAS*TKTVKL
Trigger: TAATTTCACAGTTTTTGTGCAACTGGCTGAAGGAAT...ACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp TCAAGTCCACATTTTCAAACTGGATGGTCACATTGTGGATTCCCGCATGGTGGAGTTGAAGGAATCACCTaGATTCAAAGAAGAAACCTT +
Preference number: 4 (lower is better)
Translates to: SSPHFQTGWSHCGFPHGGVEGIT*IQRRNL
Trigger: AAGGTTTCTTCTTTGAATGCAGGTGATTCCTTCAAC...TCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTGAAAATGTGGACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CCA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCATTTCATCATGTCTTCTaGCTCATTCTGGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: GISTNVYVGESGPLISMPFHHVF*LILGVE
Trigger: TTCAACACCCAGAATGAGCCAGAAGACATGATGAAA...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp GTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTGCTGCAAGTCTAGTCTaGGCCTACAACCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: VLISLETRTSLNTVSAAIAASLV*AYNPES
Trigger: GCTTTCTGGGTTGTAGGCCCAGACTAGACTTGCAGC...AATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp GCTGCCTTCATTATCAACCCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACTTGAACTTGGTAATATaGATCAGCGACATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: AAFIINPAPLKNPVQILNLNLVI*ISDMKE
Trigger: TTCTTTCATGTCGCTGATCCATATTACCAAGTTCAA...GTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGATAATGAAGGCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCACTCCAGGCCATAATCTaGTATAACTGTCTATCAAGA +
Preference number: 4 (lower is better)
Translates to: GISTNVYVGESGPLISMPLQAII*YNCLSR
Trigger: TCTTGATAGACAGTTATACCAGATTATGGCCTGGAG...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CCA 90 bp CCTGGAGTAAGCCTCACAAAAGCTCTTATGACCTCACAGGGCAGCTGTCTTATTATGTACATACATTACTaGGGGATTCACATGCAATTA +
Preference number: 4 (lower is better)
Translates to: PGVSLTKALMTSQGSCLIMYIHY*GIHMQL
Trigger: TAATTGCATGTGAATCCCCCAGTAATGTATGTACAT...AATAAGACAGCTGCCCTGTGAGGTCATAAGAGCTTTTGTGAGGCTTACTCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp GATAACTATCCAGTCTCATTGGATAGTGGGCTCATCAAATTGAGGATATTCAGGGCAAAAGTACACCTCTaGTATTCAGAGCTTCAGACT +
Preference number: 4 (lower is better)
Translates to: DNYPVSLDSGLIKLRIFRAKVHL*YSELQT
Trigger: AGTCTGAAGCTCTGAATATCAGAGGTGTACTTTTGC...CCTGAATATCCTCAATTTGATGAGCCCACTATCCAATGAGACTGGATAGTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp TCCTTAGGATACTTGATGTGCAGGGTGGCAATAATCTTTCCACTTACAAGTTCCCTCGTCTATATGGTCTaGTTATGTGAGTACCAGATT +
Preference number: 4 (lower is better)
Translates to: SLGYLMCRVAIIFPLTSSLVYMV*LCEYQI
Trigger: AATCTGGTACTCACATAATCAGACCATATAGACGAG...GGAACTTGTAAGTGGAAAGATTATTGCCACCCTGCACATCAAGTATCCTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR TCA 90 bp TCCTTAGGATACTTGATGTGCAGGGTGGCAATAATCTTTCCACTTACAAGTTCCAAACAAGAACTTCTTTaGACACTGTATCCGCAGCTA +
Preference number: 4 (lower is better)
Translates to: SLGYLMCRVAIIFPLTSSKQELL*TLYPQL
Trigger: TAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTT...GGAACTTGTAAGTGGAAAGATTATTGCCACCCTGCACATCAAGTATCCTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR TCA 90 bp AGTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTCAACCCAGCACCTCTaGAAAACCCTGTGCAGATTC +
Preference number: 4 (lower is better)
Translates to: SSNQFRNKNFFEHCIRSYSTQHL*KTLCRF
Trigger: GAATCTGCACAGGGTTTTTCAGAGGTGCTGGGTTGA...ATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCACAATTAAAGAGAGAGTaGAACCCAAGTGAAAATAGC +
Preference number: 4 (lower is better)
Translates to: GISTNVYVGESGPLISMPQLKRE*NPSENS
Trigger: GCTATTTTCACTTGGGTTTCACTCTCTCTTTAATTG...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGAACTGGTCCCTGAGCTaGCACACAAAATATGCCGTA +
Preference number: 4 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMNWSLS*HTKYAV
Trigger: TACGGCATATTTTGTGTGTCAGCTCAGGGACCAGTT...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp CTACAGTACACAACCCACACATCAGGAGCAAGAACACATCCAATTCAAAATGTCAACATCTCAACCCCATaGATCAATTGTGCTGATAAC +
Preference number: 4 (lower is better)
Translates to: LQYTTHTSGARTHPIQNVNISTP*INCADN
Trigger: GTTATCAGCACAATTGATTCATGGGGTTGAGATGTT...GACATTTTGAATTGGATGTGTTCTTGCTCCTGATGTGTGGGTTGTGTACTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp TCTTTGAAAGGTATGCTCATGTACATACATTACTGGGGGATTCACATGCAATTAAGATGCAGGGTGAGTTaGAGAGCAACAGTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: SLKGMLMYIHYWGIHMQLRCRVS*RATVSP
Trigger: AGGACTTACTGTTGCTCTGCAACTCACCCTGCATCT...TAATTGCATGTGAATCCCCCAGTAATGTATGTACATGAGCATACCTTTCAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp TCAAGTCCACATTTTCAAACTGGATGGTCACATTGTGGATTCCCGCATGGTGGACTCTTTTCTGGTAAATaGTGCATAGATCAATGCAAT +
Preference number: 4 (lower is better)
Translates to: SSPHFQTGWSHCGFPHGGLFSGK*CIDQCN
Trigger: ATTGCATTGATCTATGCAGCATTTACCAGAAAAGAG...TCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTGAAAATGTGGACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR GCA 90 bp CAAACTGGATGGTCACATTGTGGATTCCCGCATGGTGGAAGATTTCTCGAATTTAGTTTCTTAAGAGGATaGACTGTTTTGTGTGAGTAC +
Preference number: 4 (lower is better)
Translates to: QTGWSHCGFPHGGRFLEFSFLRG*TVLCEY
Trigger: GTACTCACACAAAACAGTGCATCCTCTTAAGAAACT...AAATTCGAGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR GCA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGTTGGACATTATTAAATaGAGTCAGCCAAACTGTCTT +
Preference number: 4 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKLDIIK*SQPNCL
Trigger: AAGACAGTTTGGCTGACTGCATTTAATAATGTCCAA...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CCA 90 bp AGTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTGTGAGCCAAGCTTGTaGTTCCAAAGTGCCTCGTCT +
Preference number: 4 (lower is better)
Translates to: SSNQFRNKNFFEHCIRSYCEPSL*FQSASS
Trigger: AGACGAGGCACTTTGGAACCACAAGCTTGGCTCACA...ATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp CTGGATGGTCACATTGTGGATTCCCGCATGGTGGAAGATTTCTCGAATTTTTGTTTCTCATTTCTCCCTTaGGCATCAACTTTTTCATTG +
Preference number: 4 (lower is better)
Translates to: LDGHIVDSRMVEDFSNFCFSFLP*ASTFSL
Trigger: CAATGAAAAAGTTGATGCCCAAGGGAGAAATGAGAA...ACAAAAATTCGAGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CCA 90 bp CAGTCAAAGAGCAGCATGAGACACCCAGGGGAATGGAAAGGAGTTAGTTACATATTGAACTTGGTAATATaGATCAGCGACATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: QSKSSMRHPGEWKGVSYILNLVI*ISDMKE
Trigger: TTCTTTCATGTCGCTGATCCATATTACCAAGTTCAA...TATGTAACTAACTCCTTTCCATTCCCCTGGGTGTCTCATGCTGCTCTTTGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp TCTTTGAAAGGTATGCTCATGTACATACATTACTGGGGGATTCACATGCAATTAAAGACTGAGAACCCCTaGAGTAAGCCTCACAAAAGC +
Preference number: 4 (lower is better)
Translates to: SLKGMLMYIHYWGIHMQLKTENP*SKPHKS
Trigger: GCTTTTGTGAGGCTTACTCCAGGGGTTCTCAGTCTT...TAATTGCATGTGAATCCCCCAGTAATGTATGTACATGAGCATACCTTTCAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp GTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTTCAGCTCTTCCATGTTaGCTCCTTTTGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: VLISLETRTSLNTVSAAISALPC*LLLGPS
Trigger: AGATGGTCCCAAAAGGAGTCAACATGGAAGAGCTGA...AATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp GATAACTATCCAGTCTCATTGGATAGTGGGCTCATCAAATTGAGGATATTCAGGAAACAAGAACTTCTTTaGACACTGTATCCGCAGCTA +
Preference number: 4 (lower is better)
Translates to: DNYPVSLDSGLIKLRIFRKQELL*TLYPQL
Trigger: TAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTT...CCTGAATATCCTCAATTTGATGAGCCCACTATCCAATGAGACTGGATAGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp AGTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTCCTGGCTAACATGGTaGAACCCGGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: SSNQFRNKNFFEHCIRSYSWLTW*NPVSTK
Trigger: TTTAGTAGAGACCGGGTTTCACCATGTTAGCCAGGA...ATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp GATAACTATCCAGTCTCATTGGATAGTGGGCTCATCAAATTGAGGATATTCAGGCTAAGAGGTGACAGTTaGTCATCTAGCAAACATTCA +
Preference number: 4 (lower is better)
Translates to: DNYPVSLDSGLIKLRIFRLRGDS*SSSKHS
Trigger: TGAATGTTTGCTAGATGATCAACTGTCACCTCTTAG...CCTGAATATCCTCAATTTGATGAGCCCACTATCCAATGAGACTGGATAGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp ACAATCTTGCAGTCTACCAGAGATGATACTAGTTGTCTAGTGAGGCACTTCCCATACACTAGTGCAGTTTaGTTTAGAAAATGCATGTTC +
Preference number: 4 (lower is better)
Translates to: TILQSTRDDTSCLVRHFPYTSAV*FRKCMF
Trigger: GAACATGCATTTTCTAAAGCAAACTGCACTAGTGTA...TGGGAAGTGCCTCACTAGACAACTAGTATCATCTCTGGTAGACTGCAAGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGAATCTATTTATCAGCTaGTACTGCCACCAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMNLFIS*YCHQAG
Trigger: CCCTGCTTGGTGGCAGTAGCAGCTGATAAATAGATT...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CCA 90 bp TTTAAATATGATGTTTGTTCTGTGGATGCTGCCTTCATTATCAACCCAGCACCTCATTTTCAAACTGGATaGTCACATTGTGGATTCCCG +
Preference number: 4 (lower is better)
Translates to: FKYDVCSVDAAFIINPAPHFQTG*SHCGFP
Trigger: CGGGAATCCACAATGTGACCATCCAGTTTGAAAATG...AGGTGCTGGGTTGATAATGAAGGCAGCATCCACAGAACAAACATCATATTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGTTAAGACTTTGTCCGTaGTCACTCAGACAGCTATCC +
Preference number: 4 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMLRLCP*SLRQLS
Trigger: GGATAGCTGTCTGAGTGACCACGGACAAAGTCTTAA...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp TCTGATTATGTGAGTACCAGATTAAAAATGCGTTCTGTTGACATAACATTGGTCACCCTGTGCAGATTCTaGACAGGACTTTACACACTA +
Preference number: 4 (lower is better)
Translates to: SDYVSTRLKMRSVDITLVTLCRF*TGLYTL
Trigger: TAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGT...GACCAATGTTATGTCAACAGAACGCATTTTTAATCTGGTACTCACATAATCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR GCA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGACAAGTTCCCAGATGTaGACTTCATGTACACTGCTA +
Preference number: 4 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMTSSQM*TSCTLL
Trigger: TAGCAGTGTACATGAAGTGCACATCTGGGAACTTGT...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp TCCTTAGGATACTTGATGTGCAGGGTGGCAATAATCTTTCCACTTACAAGTTCCATTTTCAGACAATCTTaGAGTCTACCAGAGATGATA +
Preference number: 4 (lower is better)
Translates to: SLGYLMCRVAIIFPLTSSIFRQS*SLPEMI
Trigger: TATCATCTCTGGTAGACTGCAAGATTGTCTGAAAAT...GGAACTTGTAAGTGGAAAGATTATTGCCACCCTGCACATCAAGTATCCTAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CCA 90 bp TCTTTGAAAGGTATGCTCATGTACATACATTACTGGGGGATTCACATGCAATTACTCGAATTTTTGTGCTaGCATCTTGATATCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SLKGMLMYIHYWGIHMQLLEFLC*HLDIPC
Trigger: ACAGGGGATATCAAGATGCCAGCACAAAAATTCGAG...TAATTGCATGTGAATCCCCCAGTAATGTATGTACATGAGCATACCTTTCAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CCA 90 bp TCTTTGAAAGGTATGCTCATGTACATACATTACTGGGGGATTCACATGCAATTAAGTGCCTCGTCTATATaGTCTGATTATGTGAGTACC +
Preference number: 4 (lower is better)
Translates to: SLKGMLMYIHYWGIHMQLSASSI*SDYVST
Trigger: GGTACTCACATAATCAGACCATATAGACGAGGCACT...TAATTGCATGTGAATCCCCCAGTAATGTATGTACATGAGCATACCTTTCAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CCA 90 bp GATAACTATCCAGTCTCATTGGATAGTGGGCTCATCAAATTGAGGATATTCAGGATGATGTTTGTTCTGTaGATGCTGCCTTCATTATCA +
Preference number: 4 (lower is better)
Translates to: DNYPVSLDSGLIKLRIFRMMFVL*MLPSLS
Trigger: TGATAATGAAGGCAGCATCCACAGAACAAACATCAT...CCTGAATATCCTCAATTTGATGAGCCCACTATCCAATGAGACTGGATAGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR CAA 72 bp AGTACCAGATTAAAAATGCGTTCTGTTGACATAACATaGGTCCTCCTGAGTTTTGTTAAGACTTTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: STRLKMRSVDIT*VLLSFVKTLSV
Trigger: CACGGACAAAGTCTTAACAAAACTCAGGAGGACCAATGTTATGTCAACAGAACGCATTTTTAATCTGGTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR TCA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGCTCGTCTATATGGTCTaGTTATGTGAGTACCAGATT +
Preference number: 4 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMLVYMV*LCEYQI
Trigger: AATCTGGTACTCACATAATCAGACCATATAGACGAG...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp GTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTAGCTATGATCTCACCTaGGCATTAGCTAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: VLISLETRTSLNTVSAAISYDLT*ALARSS
Trigger: AGAACTTCTAGCTAATGCTCAGGTGAGATCATAGCT...AATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR TCA 90 bp TTCCAAAGTGCCTCGTCTATATGGTCTGATTATGTGAGTACCAGATTAAAAATGCATACTTCAGGAAACTaGAATATTCCCTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: FQSASSIWSDYVSTRLKMHTSGN*NIPSLP
Trigger: TGGAAGTGAGGGAATATTTCAGTTTCCTGAAGTATG...CATTTTTAATCTGGTACTCACATAATCAGACCATATAGACGAGGCACTTTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR GCA 90 bp TCTGATTATGTGAGTACCAGATTAAAAATGCGTTCTGTTGACATAACATTGGTCGCATCTCCCATCACATaGAAAAGTACACCTCTGATA +
Preference number: 4 (lower is better)
Translates to: SDYVSTRLKMRSVDITLVASPIT*KSTPLI
Trigger: TATCAGAGGTGTACTTTTGCATGTGATGGGAGATGC...GACCAATGTTATGTCAACAGAACGCATTTTTAATCTGGTACTCACATAATCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR GCA 90 bp AGTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATACAAGTTCCCAGATGTaGACTTCATGTACACTGCTA +
Preference number: 4 (lower is better)
Translates to: SSNQFRNKNFFEHCIRSYTSSQM*TSCTLL
Trigger: TAGCAGTGTACATGAAGTGCACATCTGGGAACTTGT...ATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGGAAACATTCTATAGCTaGAGTTCAGTTCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMETFYS*SSVHSR
Trigger: TCTGCTGTGAACTGAACTGCAGCTATAGAATGTTTC...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp GATAACTATCCAGTCTCATTGGATAGTGGGCTCATCAAATTGAGGATATTCAGGCTCTTTTCTGGTAAATaGTGCATAGATCAATGCAAT +
Preference number: 4 (lower is better)
Translates to: DNYPVSLDSGLIKLRIFRLFSGK*CIDQCN
Trigger: ATTGCATTGATCTATGCAGCATTTACCAGAAAAGAG...CCTGAATATCCTCAATTTGATGAGCCCACTATCCAATGAGACTGGATAGTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGCAGTGTTATGCATTCTaGTATCCCAGGAATACTCTT +
Preference number: 4 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMQCYAF*YPRNTL
Trigger: AAGAGTATTCCTGGGATAGCAGAATGCATAACACTG...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp GATAACTATCCAGTCTCATTGGATAGTGGGCTCATCAAATTGAGGATATTCAGGATTTTCAGACAATCTTaGAGTCTACCAGAGATGATA +
Preference number: 4 (lower is better)
Translates to: DNYPVSLDSGLIKLRIFRIFRQS*SLPEMI
Trigger: TATCATCTCTGGTAGACTGCAAGATTGTCTGAAAAT...CCTGAATATCCTCAATTTGATGAGCCCACTATCCAATGAGACTGGATAGTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGGAGCACCAAACTGAGTaGCAGTGTTTTTCTAATCTT +
Preference number: 4 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMEHQTE*QCFSNL
Trigger: AAGATTAGAAAAACACTGGCACTCAGTTTGGTGCTC...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp GTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTAGCACTAAGATGAGCTaGTTACCAGGAACTAAGAAG +
Preference number: 4 (lower is better)
Translates to: VLISLETRTSLNTVSAAISTKMS*LPGTKK
Trigger: CTTCTTAGTTCCTGGTAAGCAGCTCATCTTAGTGCT...AATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CCA 90 bp TCTGATTATGTGAGTACCAGATTAAAAATGCGTTCTGTTGACATAACATTGGTCTTGTGGATTCCCGCATaGTGGAAGATTTCTCGAATT +
Preference number: 4 (lower is better)
Translates to: SDYVSTRLKMRSVDITLVLWIPA*WKISRI
Trigger: AATTCGAGAAATCTTCCACCATGCGGGAATCCACAA...GACCAATGTTATGTCAACAGAACGCATTTTTAATCTGGTACTCACATAATCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CCA 90 bp TCTTTGAAAGGTATGCTCATGTACATACATTACTGGGGGATTCACATGCAATTAACTATCCAGTCTCATTaGATAGTGGGCTCATCAAAT +
Preference number: 4 (lower is better)
Translates to: SLKGMLMYIHYWGIHMQLTIQSH*IVGSSN
Trigger: ATTTGATGAGCCCACTATCCAATGAGACTGGATAGT...TAATTGCATGTGAATCCCCCAGTAATGTATGTACATGAGCATACCTTTCAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366926.4
3UTR CAA 72 bp CTTTACACACTAAGAGATGGTTATTTTCAGACAATCTaGCAGTCTACCAGAGATGATACTAGTTGTCTAGTG +
Preference number: 4 (lower is better)
Translates to: LYTLRDGYFQTI*QSTRDDTSCLV
Trigger: CACTAGACAACTAGTATCATCTCTGGTAGACTGCAAGATTGTCTGAAAATAACCATCTCTTAGTGTGTAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp TCTTTGAAAGGTATGCTCATGTACATACATTACTGGGGGATTCACATGCAATTAAGTTTCTTAAGAGGATaGACTGTTTTGTGTGAGTAC +
Preference number: 4 (lower is better)
Translates to: SLKGMLMYIHYWGIHMQLSFLRG*TVLCEY
Trigger: GTACTCACACAAAACAGTGCATCCTCTTAAGAAACT...TAATTGCATGTGAATCCCCCAGTAATGTATGTACATGAGCATACCTTTCAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CCA 90 bp TCTGATTATGTGAGTACCAGATTAAAAATGCGTTCTGTTGACATAACATTGGTCTGGATTCCCGCATGGTaGAAGATTTCTCGAATTTTT +
Preference number: 4 (lower is better)
Translates to: SDYVSTRLKMRSVDITLVWIPAW*KISRIF
Trigger: AAAAATTCGAGAAATCTTCCACCATGCGGGAATCCA...GACCAATGTTATGTCAACAGAACGCATTTTTAATCTGGTACTCACATAATCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CCA 90 bp TTTAAATATGATGTTTGTTCTGTGGATGCTGCCTTCATTATCAACCCAGCACCTGAGAAACTAAATTCCTaGTTTGACAACCTCATTTCT +
Preference number: 4 (lower is better)
Translates to: FKYDVCSVDAAFIINPAPEKLNS*FDNLIS
Trigger: AGAAATGAGGTTGTCAAACCAGGAATTTAGTTTCTC...AGGTGCTGGGTTGATAATGAAGGCAGCATCCACAGAACAAACATCATATTTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR TCA 90 bp GTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTACCATTGAACATCTTTaGAAGGTATGCTCATGTACA +
Preference number: 4 (lower is better)
Translates to: VLISLETRTSLNTVSAAITIEHL*KVCSCT
Trigger: TGTACATGAGCATACCTTTCAAAGATGTTCAATGGT...AATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR GCA 90 bp AGTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTTAGGATACTTGATGTaGAGGGTGGCAATAATCTTT +
Preference number: 4 (lower is better)
Translates to: SSNQFRNKNFFEHCIRSYLGYLM*RVAIIF
Trigger: AAAGATTATTGCCACCCTGCACATCAAGTATCCTAA...ATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CCA 90 bp AGTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTCCACATTTTCAAACTaGATGGTCACATTGTGGATT +
Preference number: 4 (lower is better)
Translates to: SSNQFRNKNFFEHCIRSYSTFSN*MVTLWI
Trigger: AATCCACAATGTGACCATCCAGTTTGAAAATGTGGA...ATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp GTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTGTTTGCTTTAGAAAATaGATGTTCAAGCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: VLISLETRTSLNTVSAAIVCFRK*MFKLKQ
Trigger: CTGTTTCAGCTTGAACATGCATTTTCTAAAGCAAAC...AATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp AGTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTACACTAGTGCAGTTTaGTTTAGAAAATGCATGTTC +
Preference number: 4 (lower is better)
Translates to: SSNQFRNKNFFEHCIRSYYTSAV*FRKCMF
Trigger: GAACATGCATTTTCTAAAGCAAACTGCACTAGTGTA...ATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR GCA 90 bp AGTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTACAGTGGAATTAAGTaGCTTTTCTTACCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: SSNQFRNKNFFEHCIRSYYSGIK*LFLPRK
Trigger: TTTTCTGGGTAAGAAAAGGCACTTAATTCCACTGTA...ATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS TCA 90 bp TCAGCGCGCCCACCACCTCGGCGCGGGCGTAGCCGTAGGTGGCGCTaGAGCCCCGGGTGGGGCGCCGGGCGATGTAGCCGGCGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: SARPPPRRGRSRRWR*SPGWGAGRCSRRSG
Trigger: GCCTGAGCGCCGGCTACATCGCCCGGCGCCCCACCCGGGGCTTCAGCGCCACCTACGGCTACGCCCGCGCCGAGGTGGTGGGCGCGCTGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS CCA 90 bp CCTTTCCACCGAGGTCCCCCGGAGGGTTACGGCCGAGTCCGAGCCTaGGGCTGTCGGGTCCGCCGCGCGCCGCGGGTCCTCCGCGCCCTG +
Preference number: 5 (lower is better)
Translates to: PFHRGPPEGYGRVRA*GCRVRRAPRVLRAL
Trigger: CAGGGCGCGGAGGACCCGCGGCGCGCGGCGGACCCGACAGCCCCAGGCTCGGACTCGGCCGTAACCCTCCGGGGGACCTCGGTGGAAAGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS GCA 90 bp ATCCGTGAGGCCCGGTACCCGCCTCCCAGATTGTCTCGCCGGCCCTaGCCCACCGCTTTTTATAACGCGAGGCCGAGCGCCACCAGTCCC +
Preference number: 5 (lower is better)
Translates to: IREARYPPPRLSRRP*PTAFYNARPSATSP
Trigger: GGGACTGGTGGCGCTCGGCCTCGCGTTATAAAAAGCGGTGGGGCAGGGCCGGCGAGACAATCTGGGAGGCGGGTACCGGGCCTCACGGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS TCA 90 bp GCAGGACTCAGAGTACCTTGGAAGAGCAACAGCCTAGGAAGATTCTaGCCTGCAGGAAGAGCGACTGTGCCGTCTCACTGGGCCACATCG +
Preference number: 5 (lower is better)
Translates to: AGLRVPWKSNSLGRF*PAGRATVPSHWATS
Trigger: CGATGTGGCCCAGTGAGACGGCACAGTCGCTCTTCCTGCAGGTCAGAATCTTCCTAGGCTGTTGCTCTTCCAAGGTACTCTGAGTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484079.1
CDS GCA 90 bp TCAGAGTGCCCCAGGGCTCCGTCCTTGATTCTCTTCTCTTTTCCATaGACGCAGTGCCACTCAAAGCCTTGGTCTGCATACCAGTGTCAG +
Preference number: 5 (lower is better)
Translates to: SECPRAPSLILFSFP*TQCHSKPWSAYQCQ
Trigger: CTGACACTGGTATGCAGACCAAGGCTTTGAGTGGCACTGCGTGCATGGAAAAGAGAAGAGAATCAAGGACGGAGCCCTGGGGCACTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS-3UTR CAA 90 bp CAAACTGGATGGTCACATTGTGGATTCCCGCATGGTGGAAGATTTCTCGAATTTGTGAGGAAGACCGCGTaGCTCAGCGCGCCCACCACC +
Preference number: 5 (lower is better)
Translates to: QTGWSHCGFPHGGRFLEFVRKTA*LSAPTT
Trigger: GGTGGTGGGCGCGCTGAGCAACGCGGTCTTCCTCAC...AAATTCGAGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CAA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCAGTGAGGAAGACCGCGTaGCTCAGCGCGCCCACCACC +
Preference number: 5 (lower is better)
Translates to: GISTNVYVGESGPLISMPVRKTA*LSAPTT
Trigger: GGTGGTGGGCGCGCTGAGCAACGCGGTCTTCCTCAC...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CAA 90 bp AGAGTGCAGAGTAGGTGCAGTGTCTGGCATGGCTTTGTACTAAGAGGTGACAGTTGTTCTCCCAGTGCTTaGGGAGGCCAAGGCGAGAGA +
Preference number: 5 (lower is better)
Translates to: RVQSRCSVWHGFVLRGDSCSPSA*GGQGER
Trigger: TCTCTCGCCTTGGCCTCCCAAAGCACTGGGAGAACA...ACTGTCACCTCTTAGTACAAAGCCATGCCAGACACTGCACCTACTCTGCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS GCA 90 bp AACCACGGACCCCAGGGCATCTCCCATCACATGCAAAAGTACACCTaGCAGGAAGAAAGACTACTGCAGCACAGATGCAAATCTGGAAGC +
Preference number: 5 (lower is better)
Translates to: NHGPQGISHHMQKYT*QEERLLQHRCKSGS
Trigger: GCTTCCAGATTTGCATCTGTGCTGCAGTAGTCTTTCTTCCTGGCAGGTGTACTTTTGCATGTGATGGGAGATGCCCTGGGGTCCGTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484079.1
CDS-3UTR CAA 90 bp CCTGGAGTAAGCCTCACAAAAGCTCTTATGACCTCACAGGGCAGCTGTCTTATTAATCACCTGCTACGTTaGCGAACACGGTCGCCCCCT +
Preference number: 5 (lower is better)
Translates to: PGVSLTKALMTSQGSCLINHLLR*RTRSPP
Trigger: AGGGGGCGACCGTGTTCGCAAACGTAGCAGGTGATT...AATAAGACAGCTGCCCTGTGAGGTCATAAGAGCTTTTGTGAGGCTTACTCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CAA 90 bp CCTGGAGTAAGCCTCACAAAAGCTCTTATGACCTCACAGGGCAGCTGTCTTATTAGAGAGGGCCCACCATaGTGCTCAGCACAGCCATTG +
Preference number: 5 (lower is better)
Translates to: PGVSLTKALMTSQGSCLIREGPP*CSAQPL
Trigger: CAATGGCTGTGCTGAGCACAATGGTGGGCCCTCTCT...AATAAGACAGCTGCCCTGTGAGGTCATAAGAGCTTTTGTGAGGCTTACTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS GCA 90 bp ATGCAAAAGTACACCTGCCAGGAAGAAAGACTACTGCAGCACAGATaGAAATCTGGAAGCCACGTGACACTCACTGACTTGGGTGTCCGG +
Preference number: 5 (lower is better)
Translates to: MQKYTCQEERLLQHR*KSGSHVTLTDLGVR
Trigger: CCGGACACCCAAGTCAGTGAGTGTCACGTGGCTTCCAGATTTGCATCTGTGCTGCAGTAGTCTTTCTTCCTGGCAGGTGTACTTTTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484079.1
CDS GCA 90 bp GGTGTTGAAGGAATCACCTGCTTCCATGTCTCCCTGGGGCTTGGGTaGTGCGCAGTAACAGCAGTCCAAGAAGATGACATAGTTAAGAAC +
Preference number: 5 (lower is better)
Translates to: GVEGITCFHVSLGLG*CAVTAVQEDDIVKN
Trigger: GTTCTTAACTATGTCATCTTCTTGGACTGCTGTTACTGCGCAGCACCCAAGCCCCAGGGAGACATGGAAGCAGGTGATTCCTTCAACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS-3UTR CAA 90 bp ACCATCTGTAGCAGAATGGCAGCGGTCTCCTTGATAAGCGGGAAGGCAGATGACATCAGCTCTTCCATGTaGACTCCTTTTGGGACCATC +
Preference number: 5 (lower is better)
Translates to: TICSRMAAVSLISGKADDISSSM*TPFGTI
Trigger: GATGGTCCCAAAAGGAGTCAACATGGAAGAGCTGAT...GTCATCTGCCTTCCCGCTTATCAAGGAGACCGCTGCCATTCTGCTACAGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CAA 90 bp CAGTCAAAGAGCAGCATGAGACACCCAGGGGAATGGAAAGGAGTTAGTTACATATGCTTAGCACAGCCCTaGGAGATGCAGGGTGAGTTG +
Preference number: 5 (lower is better)
Translates to: QSKSSMRHPGEWKGVSYICLAQP*EMQGEL
Trigger: CAACTCACCCTGCATCTCCAAGGGCTGTGCTAAGCA...TATGTAACTAACTCCTTTCCATTCCCCTGGGTGTCTCATGCTGCTCTTTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CAA 90 bp CAAACTGGATGGTCACATTGTGGATTCCCGCATGGTGGAAGATTTCTCGAATTTAGAGAGGGCCCACCATaGTGCTCAGCACAGCCATTG +
Preference number: 5 (lower is better)
Translates to: QTGWSHCGFPHGGRFLEFREGPP*CSAQPL
Trigger: CAATGGCTGTGCTGAGCACAATGGTGGGCCCTCTCT...AAATTCGAGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CAA 90 bp ACAGAGCATGCATGCTGCAAGTCTAGTCTGGGCCTACAACCCAGAAAGCTCTTTTTTTGTGAGCCAAGCTaGTGGTTCCAAAGTGCCTCG +
Preference number: 5 (lower is better)
Translates to: TEHACCKSSLGLQPRKLFFCEPS*WFQSAS
Trigger: CGAGGCACTTTGGAACCACAAGCTTGGCTCACAAAA...AAAGAGCTTTCTGGGTTGTAGGCCCAGACTAGACTTGCAGCATGCATGCTCTGT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CAA 90 bp TCTGATTATGTGAGTACCAGATTAAAAATGCGTTCTGTTGACATAACATTGGTCTACCCGCCTCCCAGATaGTCTCGCCGGCCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: SDYVSTRLKMRSVDITLVYPPPR*SRRPCP
Trigger: GGGGCAGGGCCGGCGAGACAATCTGGGAGGCGGGTA...GACCAATGTTATGTCAACAGAACGCATTTTTAATCTGGTACTCACATAATCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS GCA 90 bp GTTGAAGGAATCACCTGCTTCCATGTCTCCCTGGGGCTTGGGTGCTaGGCAGTAACAGCAGTCCAAGAAGATGACATAGTTAAGAACATT +
Preference number: 5 (lower is better)
Translates to: VEGITCFHVSLGLGC*AVTAVQEDDIVKNI
Trigger: AATGTTCTTAACTATGTCATCTTCTTGGACTGCTGTTACTGCGCAGCACCCAAGCCCCAGGGAGACATGGAAGCAGGTGATTCCTTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS-3UTR CAA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGGGCTCATTCTGGGTGTaGAAGGAATCACCTGCTACG +
Preference number: 5 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKGSFWV*KESPAT
Trigger: CGTAGCAGGTGATTCCTTCAACACCCAGAATGAGCC...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CAA 90 bp CTGGATGGTCACATTGTGGATTCCCGCATGGTGGAAGATTTCTCGAATTTTTGTCTGTATCCGCAGCTATaGAGCCCCAGTCCCAGACTT +
Preference number: 5 (lower is better)
Translates to: LDGHIVDSRMVEDFSNFCLYPQL*SPSPRL
Trigger: AAGTCTGGGACTGGGGCTCAATAGCTGCGGATACAG...ACAAAAATTCGAGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CAA 90 bp ACAGAGCATGCATGCTGCAAGTCTAGTCTGGGCCTACAACCCAGAAAGCTCTTTAGAGGATGCACTGTTTaGTGTGAGTACATGCCACAC +
Preference number: 5 (lower is better)
Translates to: TEHACCKSSLGLQPRKLFRGCTV*CEYMPH
Trigger: GTGTGGCATGTACTCACACAAAACAGTGCATCCTCT...AAAGAGCTTTCTGGGTTGTAGGCCCAGACTAGACTTGCAGCATGCATGCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS TCA 90 bp GTAGTTTTTGGGATTCCCTCTCCTCTTCCAAGACAGGATCCTGGCTaGGATCAAACACTGTATTCTTGGAGGTTCCAGCAACAACAGGTC +
Preference number: 5 (lower is better)
Translates to: VVFGIPSPLPRQDPG*DQTLYSWRFQQQQV
Trigger: GACCTGTTGTTGCTGGAACCTCCAAGAATACAGTGTTTGATCTCAGCCAGGATCCTGTCTTGGAAGAGGAGAGGGAATCCCAAAAACTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS-3UTR CAA 90 bp TGGGCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTTGTGGTTCCAAAGTCTGTCCTTAGGATACTaGATGTGCAGGGTGGCAATA +
Preference number: 5 (lower is better)
Translates to: WAYNPESSFCEPSLWFQSLSLGY*MCRVAI
Trigger: TATTGCCACCCTGCACATCAAGTATCCTAAGGACAG...ACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CAA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGTTTTGTGAGCCAAGCTaGTGGTTCCAAAGTGCCTCG +
Preference number: 5 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKFCEPS*WFQSAS
Trigger: CGAGGCACTTTGGAACCACAAGCTTGGCTCACAAAA...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS TCA 90 bp AGGAAGAAAGACTACTGCAGCACAGATGCAAATCTGGAAGCCACGTaGCACTCACTGACTTGGGTGTCCGGGTATATGAATATCTGTTAC +
Preference number: 5 (lower is better)
Translates to: RKKDYCSTDANLEAT*HSLTWVSGYMNICY
Trigger: GTAACAGATATTCATATACCCGGACACCCAAGTCAGTGAGTGTCACGTGGCTTCCAGATTTGCATCTGTGCTGCAGTAGTCTTTCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484079.1
CDS-3UTR CAA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGATCAGCTCTTCCATGTaGACTCCTTTTGGGACCATC +
Preference number: 5 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKISSSM*TPFGTI
Trigger: GATGGTCCCAAAAGGAGTCAACATGGAAGAGCTGAT...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CAA 90 bp TCCTTAGGATACTTGATGTGCAGGGTGGCAATAATCTTTCCACTTACAAGTTCCAACTGGATGGTCACATaGTGGATTCCCGCATGGTGG +
Preference number: 5 (lower is better)
Translates to: SLGYLMCRVAIIFPLTSSNWMVT*WIPAWW
Trigger: CCACCATGCGGGAATCCACAATGTGACCATCCAGTT...GGAACTTGTAAGTGGAAAGATTATTGCCACCCTGCACATCAAGTATCCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CAA 90 bp AGAGTGCAGAGTAGGTGCAGTGTCTGGCATGGCTTTGTACTAAGAGGTGACAGTTACTACCAACATAGTTaGGTTATGGGTCTGAATCCG +
Preference number: 5 (lower is better)
Translates to: RVQSRCSVWHGFVLRGDSYYQHS*VMGLNP
Trigger: CGGATTCAGACCCATAACCAAACTATGTTGGTAGTA...ACTGTCACCTCTTAGTACAAAGCCATGCCAGACACTGCACCTACTCTGCACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CAA 90 bp CTTACAAGTTCCCAGATGTGCACTTCATGTACACTGCTAATTCCAGGCACAGCAAGAGGATGCACTGTTTaGTGTGAGTACATGCCACAC +
Preference number: 5 (lower is better)
Translates to: LTSSQMCTSCTLLIPGTARGCTV*CEYMPH
Trigger: GTGTGGCATGTACTCACACAAAACAGTGCATCCTCT...TGCTGTGCCTGGAATTAGCAGTGTACATGAAGTGCACATCTGGGAACTTGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CAA 90 bp ACAGAGCATGCATGCTGCAAGTCTAGTCTGGGCCTACAACCCAGAAAGCTCTTTTACCACCACTGGAATTaGCTCTACCAATGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: TEHACCKSSLGLQPRKLFYHHWN*LYQWQK
Trigger: TTTTTGCCATTGGTAGAGCAAATTCCAGTGGTGGTA...AAAGAGCTTTCTGGGTTGTAGGCCCAGACTAGACTTGCAGCATGCATGCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS GCA 90 bp TGTATTCTTGGAGGTTCCAGCAACAACAGGTCGACTTTTGAACAGTaGTGTCAACAGGGCATCATTGCAATCCAGTGCTTTGAGAATTGC +
Preference number: 5 (lower is better)
Translates to: CILGGSSNNRSTFEQ*CQQGIIAIQCFENC
Trigger: GCAATTCTCAAAGCACTGGATTGCAATGATGCCCTGTTGACAGCACTGTTCAAAAGTCGACCTGTTGTTGCTGGAACCTCCAAGAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS GCA 90 bp CTGTGTACACGTGTCAGAATGCCAACTGCAATGGCATGCATGGATTaGTACAGTGACGAGGATTTGATTGAACAATGGGATCTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: LCTRVRMPTAMACMD*YSDEDLIEQWDLLH
Trigger: GTGAAGAAGATCCCATTGTTCAATCAAATCCTCGTCACTGTAGCAATCCATGCATGCCATTGCAGTTGGCATTCTGACACGTGTACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS-3UTR CAA 90 bp CAAACTGGATGGTCACATTGTGGATTCCCGCATGGTGGAAGATTTCTCGAATTTTTTTGTGCTGGCATCTaGATATCCCCTGTCCTTAGG +
Preference number: 5 (lower is better)
Translates to: QTGWSHCGFPHGGRFLEFFCAGI*ISPVLR
Trigger: CCTAAGGACAGGGGATATCAAGATGCCAGCACAAAA...AAATTCGAGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CAA 90 bp TTCCAAAGTGCCTCGTCTATATGGTCTGATTATGTGAGTACCAGATTAAAAATGTGTTCTCCCAGTGCTTaGGGAGGCCAAGGCGAGAGA +
Preference number: 5 (lower is better)
Translates to: FQSASSIWSDYVSTRLKMCSPSA*GGQGER
Trigger: TCTCTCGCCTTGGCCTCCCAAAGCACTGGGAGAACA...CATTTTTAATCTGGTACTCACATAATCAGACCATATAGACGAGGCACTTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CAA 90 bp ACAGAGCATGCATGCTGCAAGTCTAGTCTGGGCCTACAACCCAGAAAGCTCTTTAAAGACTATGGGACTTaGGAGAGGCTTTCATTAACA +
Preference number: 5 (lower is better)
Translates to: TEHACCKSSLGLQPRKLFKDYGT*ERLSLT
Trigger: TGTTAATGAAAGCCTCTCCAAAGTCCCATAGTCTTT...AAAGAGCTTTCTGGGTTGTAGGCCCAGACTAGACTTGCAGCATGCATGCTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS TCA 90 bp TGCTGTCAACAGGGCATCATTGCAATCCAGTGCTTTGAGAATTGCTaGACAAAAGCAAAGTGTCAGACTGTGTCACAGGGATCAATCAGT +
Preference number: 5 (lower is better)
Translates to: CCQQGIIAIQCFENC*TKAKCQTVSQGSIS
Trigger: ACTGATTGATCCCTGTGACACAGTCTGACACTTTGCTTTTGTTCAGCAATTCTCAAAGCACTGGATTGCAATGATGCCCTGTTGACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CCA 90 bp ACTTTTCTCAGGGTTACTTGTGGATTGTTGTTGTCGAGAGCAAATTaGAGACTTCTAACATCTGGTCCAGCACTTTGCCACCACTTCACT +
Preference number: 5 (lower is better)
Translates to: TFLRVTCGLLLSRAN*RLLTSGPALCHHFT
Trigger: AGTGAAGTGGTGGCAAAGTGCTGGACCAGATGTTAGAAGTCTCCAATTTGCTCTCGACAACAACAATCCACAAGTAACCCTGAGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CCA 90 bp AAGAACTGGGTACAAAAGAGTAGTAGCCATGGTGACCAGAAACCTTaGAATCATTTTTCACAGTTCAGCTTCCCAGTCCTCTACGTAAGC +
Preference number: 5 (lower is better)
Translates to: KNWVQKSSSHGDQKP*NHFSQFSFPVLYVS
Trigger: GCTTACGTAGAGGACTGGGAAGCTGAACTGTGAAAAATGATTCCAAGGTTTCTGGTCACCATGGCTACTACTCTTTTGTACCCAGTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS-3UTR CAA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGATGGCAGCGGTCTCCTaGATAAGCGGGAAGGCAGAT +
Preference number: 5 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMMAAVS*ISGKAD
Trigger: ATCTGCCTTCCCGCTTATCAAGGAGACCGCTGCCAT...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CAA 90 bp CTACAGTACACAACCCACACATCAGGAGCAAGAACACATCCAATTCAAAATGTCCTGTCCTTAGGATACTaGATGTGCAGGGTGGCAATA +
Preference number: 5 (lower is better)
Translates to: LQYTTHTSGARTHPIQNVLSLGY*MCRVAI
Trigger: TATTGCCACCCTGCACATCAAGTATCCTAAGGACAG...GACATTTTGAATTGGATGTGTTCTTGCTCCTGATGTGTGGGTTGTGTACTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CAA 90 bp CTACAGTACACAACCCACACATCAGGAGCAAGAACACATCCAATTCAAAATGTCTTTTGTGCTGGCATCTaGATATCCCCTGTCCTTAGG +
Preference number: 5 (lower is better)
Translates to: LQYTTHTSGARTHPIQNVFCAGI*ISPVLR
Trigger: CCTAAGGACAGGGGATATCAAGATGCCAGCACAAAA...GACATTTTGAATTGGATGTGTTCTTGCTCCTGATGTGTGGGTTGTGTACTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CAA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGTGCTTAGCACAGCCCTaGGAGATGCAGGGTGAGTTG +
Preference number: 5 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMCLAQP*EMQGEL
Trigger: CAACTCACCCTGCATCTCCAAGGGCTGTGCTAAGCA...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CAA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGGAAACAAGAACTTCTTaGAACACTGTATCCGCAGCT +
Preference number: 5 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKETRTS*NTVSAA
Trigger: AGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTC...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CAA 90 bp ACAGAGCATGCATGCTGCAAGTCTAGTCTGGGCCTACAACCCAGAAAGCTCTTTATTCTCATTTCTCCCTaGGGCATCAACTTTTTCATT +
Preference number: 5 (lower is better)
Translates to: TEHACCKSSLGLQPRKLFILISP*GINFFI
Trigger: AATGAAAAAGTTGATGCCCAAGGGAGAAATGAGAAT...AAAGAGCTTTCTGGGTTGTAGGCCCAGACTAGACTTGCAGCATGCATGCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS TCA 90 bp TGCCAACTGCAATGGCATGCATGGATTGCTACAGTGACGAGGATTTaGTTGAACAATGGGATCTTCTTCACAAGTAGTTTTTGGGATTCC +
Preference number: 5 (lower is better)
Translates to: CQLQWHAWIATVTRI*LNNGIFFTSSFWDS
Trigger: GGAATCCCAAAAACTACTTGTGAAGAAGATCCCATTGTTCAATCAAATCCTCGTCACTGTAGCAATCCATGCATGCCATTGCAGTTGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS GCA 90 bp ATGAAAACACTGTGTACACGTGTCAGAATGCCAACTGCAATGGCATaGATGGATTGCTACAGTGACGAGGATTTGATTGAACAATGGGAT +
Preference number: 5 (lower is better)
Translates to: MKTLCTRVRMPTAMA*MDCYSDEDLIEQWD
Trigger: ATCCCATTGTTCAATCAAATCCTCGTCACTGTAGCAATCCATGCATGCCATTGCAGTTGGCATTCTGACACGTGTACACAGTGTTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS-3UTR CAA 90 bp TCTTTGAAAGGTATGCTCATGTACATACATTACTGGGGGATTCACATGCAATTAAACTGGATGGTCACATaGTGGATTCCCGCATGGTGG +
Preference number: 5 (lower is better)
Translates to: SLKGMLMYIHYWGIHMQLNWMVT*WIPAWW
Trigger: CCACCATGCGGGAATCCACAATGTGACCATCCAGTT...TAATTGCATGTGAATCCCCCAGTAATGTATGTACATGAGCATACCTTTCAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CAA 90 bp CTGGATGGTCACATTGTGGATTCCCGCATGGTGGAAGATTTCTCGAATTTTTGTAGTTTTGTTAAGACTTaGTCCGTGGTCACTCAGACA +
Preference number: 5 (lower is better)
Translates to: LDGHIVDSRMVEDFSNFCSFVKT*SVVTQT
Trigger: TGTCTGAGTGACCACGGACAAAGTCTTAACAAAACT...ACAAAAATTCGAGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CAA 90 bp CAGTCAAAGAGCAGCATGAGACACCCAGGGGAATGGAAAGGAGTTAGTTACATATCTGTTGACATAACATaGGTCCTCCTGAGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: QSKSSMRHPGEWKGVSYISVDIT*VLLSFV
Trigger: AACAAAACTCAGGAGGACCAATGTTATGTCAACAGA...TATGTAACTAACTCCTTTCCATTCCCCTGGGTGTCTCATGCTGCTCTTTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CAA 90 bp TGGGCCTACAACCCAGAAAGCTCTTTTTGTGAGCCAAGCTTGTGGTTCCAAAGTTATTTTCAGACAATCTaGCAGTCTACCAGAGATGAT +
Preference number: 5 (lower is better)
Translates to: WAYNPESSFCEPSLWFQSYFQTI*QSTRDD
Trigger: ATCATCTCTGGTAGACTGCAAGATTGTCTGAAAATA...ACTTTGGAACCACAAGCTTGGCTCACAAAAAGAGCTTTCTGGGTTGTAGGCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CAA 90 bp CAGTCAAAGAGCAGCATGAGACACCCAGGGGAATGGAAAGGAGTTAGTTACATAAGGTATTACTTCATATaGACTCCAGGCCATAATCTG +
Preference number: 5 (lower is better)
Translates to: QSKSSMRHPGEWKGVSYIRYYFI*TPGHNL
Trigger: CAGATTATGGCCTGGAGTCAATATGAAGTAATACCT...TATGTAACTAACTCCTTTCCATTCCCCTGGGTGTCTCATGCTGCTCTTTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CAA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCAATCATCCTTTCCGGATaGTTCTCATTAGAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: GISTNVYVGESGPLISMPIILSG*FSLECR
Trigger: TCTGCACTCTAATGAGAACAATCCGGAAAGGATGAT...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CAA 90 bp TTTAAATATGATGTTTGTTCTGTGGATGCTGCCTTCATTATCAACCCAGCACCTGCAACTCTAGCAAAATaGCCTGTGAGGACAGGAGGA +
Preference number: 5 (lower is better)
Translates to: FKYDVCSVDAAFIINPAPATLAK*PVRTGG
Trigger: TCCTCCTGTCCTCACAGGCAATTTTGCTAGAGTTGC...AGGTGCTGGGTTGATAATGAAGGCAGCATCCACAGAACAAACATCATATTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS CCA 90 bp ATTTACCAGTGGGGAAACAGAGATGACTTTTCTCAGGGTTACTTGTaGATTGTTGTTGTCGAGAGCAAATTGGAGACTTCTAACATCTGG +
Preference number: 5 (lower is better)
Translates to: IYQWGNRDDFSQGYL*IVVVESKLETSNIW
Trigger: CCAGATGTTAGAAGTCTCCAATTTGCTCTCGACAACAACAATCCACAAGTAACCCTGAGAAAAGTCATCTCTGTTTCCCCACTGGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS-3UTR CAA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGAGATTTCTCGAATTTTaGTGCTGGCATCTTGATATC +
Preference number: 5 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKRFLEF*CWHLDI
Trigger: GATATCAAGATGCCAGCACAAAAATTCGAGAAATCT...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CAA 90 bp ACATTTTCAAACTGGATGGTCACATTGTGGATTCCCGCATGGTGGAAGATTTCTTACTACCAACATAGTTaGGTTATGGGTCTGAATCCG +
Preference number: 5 (lower is better)
Translates to: TFSNWMVTLWIPAWWKISYYQHS*VMGLNP
Trigger: CGGATTCAGACCCATAACCAAACTATGTTGGTAGTA...AGAAATCTTCCACCATGCGGGAATCCACAATGTGACCATCCAGTTTGAAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CAA 90 bp CCAGCACCTCTGAAAAACCCTGTGCAGATTCTGAACAGGACTTTACACACTAAGTATTTTCAGACAATCTaGCAGTCTACCAGAGATGAT +
Preference number: 5 (lower is better)
Translates to: PAPLKNPVQILNRTLHTKYFQTI*QSTRDD
Trigger: ATCATCTCTGGTAGACTGCAAGATTGTCTGAAAATA...CTTAGTGTGTAAAGTCCTGTTCAGAATCTGCACAGGGTTTTTCAGAGGTGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CAA 90 bp TTTAAATATGATGTTTGTTCTGTGGATGCTGCCTTCATTATCAACCCAGCACCTAGAGGTCACTCTCCCTaGAAAATCATCCTTTCCGGA +
Preference number: 5 (lower is better)
Translates to: FKYDVCSVDAAFIINPAPRGHSP*KIILSG
Trigger: TCCGGAAAGGATGATTTTCAAGGGAGAGTGACCTCT...AGGTGCTGGGTTGATAATGAAGGCAGCATCCACAGAACAAACATCATATTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS TCA 90 bp CATTGCACCCAGGTTTCAATATGGACAATTTGTGATGATCTGAGATaGAGTTGTGACGTTGTGAAATGCACCATTGAGCTAATGCAGTTG +
Preference number: 5 (lower is better)
Translates to: HCTQVSIWTICDDLR*SCDVVKCTIELMQL
Trigger: CAACTGCATTAGCTCAATGGTGCATTTCACAACGTCACAACTTCATCTCAGATCATCACAAATTGTCCATATTGAAACCTGGGTGCAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS GCA 90 bp TTTCATCATGTCTTCTGGCTCATTCTGGGTGTTGAAGGAATCACCTaGATTCAAAGAAGAAACCTTGTGTTGTGTATAAGTTCTGCTACG +
Preference number: 5 (lower is better)
Translates to: FHHVFWLILGVEGIT*IQRRNLVLCISSAT
Trigger: CGTAGCAGAACTTATACACAACACAAGGTTTCTTCTTTGAATGCAGGTGATTCCTTCAACACCCAGAATGAGCCAGAAGACATGATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CAA 90 bp GGAATTTCAACCAATGTTTATGTAGGAGAATCTGGCCCACTGATCTCCATGCCAAGATTTCTCGAATTTTaGTGCTGGCATCTTGATATC +
Preference number: 5 (lower is better)
Translates to: GISTNVYVGESGPLISMPRFLEF*CWHLDI
Trigger: GATATCAAGATGCCAGCACAAAAATTCGAGAAATCT...TGGCATGGAGATCAGTGGGCCAGATTCTCCTACATAAACATTGGTTGAAATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CAA 90 bp GTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATTGGCTCATTCTGGGTGTaGAAGGAATCACCTGCATTC +
Preference number: 5 (lower is better)
Translates to: VLISLETRTSLNTVSAAIGSFWV*KESPAF
Trigger: GAATGCAGGTGATTCCTTCAACACCCAGAATGAGCC...AATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CAA 90 bp CTACAGTACACAACCCACACATCAGGAGCAAGAACACATCCAATTCAAAATGTCATTCTCATTTCTCCCTaGGGCATCAACTTTTTCATT +
Preference number: 5 (lower is better)
Translates to: LQYTTHTSGARTHPIQNVILISP*GINFFI
Trigger: AATGAAAAAGTTGATGCCCAAGGGAGAAATGAGAAT...GACATTTTGAATTGGATGTGTTCTTGCTCCTGATGTGTGGGTTGTGTACTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CAA 90 bp TTCCAAAGTGCCTCGTCTATATGGTCTGATTATGTGAGTACCAGATTAAAAATGGAAACAAGAACTTCTTaGAACACTGTATCCGCAGCT +
Preference number: 5 (lower is better)
Translates to: FQSASSIWSDYVSTRLKMETRTS*NTVSAA
Trigger: AGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTC...CATTTTTAATCTGGTACTCACATAATCAGACCATATAGACGAGGCACTTTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS-3UTR CAA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGAACTATCCAGTCTCATaGGATAGTGGGCTCATCAAA +
Preference number: 5 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMNYPVS*DSGLIK
Trigger: TTTGATGAGCCCACTATCCAATGAGACTGGATAGTT...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366926.4
CDS-3UTR CAA 90 bp AGTTCTAATCAGTTTAGAAACAAGAACTTCTTTGAACACTGTATCCGCAGCTATAGTTTTGTTAAGACTTaGTCCGTGGTCACTCAGACA +
Preference number: 5 (lower is better)
Translates to: SSNQFRNKNFFEHCIRSYSFVKT*SVVTQT
Trigger: TGTCTGAGTGACCACGGACAAAGTCTTAACAAAACT...ATAGCTGCGGATACAGTGTTCAAAGAAGTTCTTGTTTCTAAACTGATTAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS-3UTR CAA 90 bp ATCCCAGGAATACTCTTTTCTGGTAAATGCTGCATAGATCAATGCAATCATATGAGAAGAAACCTTGTGTaGTGTATAAGTTCTGCTACG +
Preference number: 5 (lower is better)
Translates to: IPGILFSGKCCIDQCNHMRRNLV*CISSAT
Trigger: CGTAGCAGAACTTATACACAACACAAGGTTTCTTCT...CATATGATTGCATTGATCTATGCAGCATTTACCAGAAAAGAGTATTCCTGGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS CCA 72 bp CGAGGTCCCCCGGAGGGTTACGGCCGAGTCCGAGCCTaGGGCTGTCGGGTCCGCCGCGCGCCGCGGGTCCTC +
Preference number: 6 (lower is better)
Translates to: RGPPEGYGRVRA*GCRVRRAPRVL
Trigger: GAGGACCCGCGGCGCGCGGCGGACCCGACAGCCCCAGGCTCGGACTCGGCCGTAACCCTCCGGGGGACCTCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS TCA 72 bp CCACCACCTCGGCGCGGGCGTAGCCGTAGGTGGCGCTaGAGCCCCGGGTGGGGCGCCGGGCGATGTAGCCGG +
Preference number: 6 (lower is better)
Translates to: PPPRRGRSRRWR*SPGWGAGRCSR
Trigger: CCGGCTACATCGCCCGGCGCCCCACCCGGGGCTTCAGCGCCACCTACGGCTACGCCCGCGCCGAGGTGGTGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS GCA 72 bp CCGAAAGCGCCGGGGACACAGCCCTCCGCCAGCTGCTaGCGCTGCTGCAGGCGGCGACTGCGTCCCCGGAGG +
Preference number: 6 (lower is better)
Translates to: PKAPGTQPSASC*RCCRRRLRPRR
Trigger: CCTCCGGGGACGCAGTCGCCGCCTGCAGCAGCGGCAGCAGCTGGCGGAGGGCTGTGTCCCCGGCGCTTTCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356609.2
ENST00000366926.4
CDS GCA 72 bp GCCCGGTACCCGCCTCCCAGATTGTCTCGCCGGCCCTaGCCCACCGCTTTTTATAACGCGAGGCCGAGCGCC +
Preference number: 6 (lower is better)
Translates to: ARYPPPRLSRRP*PTAFYNARPSA
Trigger: GGCGCTCGGCCTCGCGTTATAAAAAGCGGTGGGGCAGGGCCGGCGAGACAATCTGGGAGGCGGGTACCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS CAA 72 bp GCGCGGATCCGTGAGGCCCGGTACCCGCCTCCCAGATaGTCTCGCCGGCCCTGCCCCACCGCTTTTTATAAC +
Preference number: 6 (lower is better)
Translates to: ARIREARYPPPR*SRRPCPTAFYN
Trigger: GTTATAAAAAGCGGTGGGGCAGGGCCGGCGAGACAATCTGGGAGGCGGGTACCGGGCCTCACGGATCCGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS CAA 90 bp GGCATTCCTCAGGCTGGACTCATGGCTGCTCTTCCTCCAGCTTTTTaGTTGGCTCCTCCCCCAGCTGCCAGATCTCCAAAGGTCAGAGTG +
Preference number: 6 (lower is better)
Translates to: GIPQAGLMAALPPAF*LAPPPAARSPKVRV
Trigger: CACTCTGACCTTTGGAGATCTGGCAGCTGGGGGAGGAGCCAACAAAAAAGCTGGAGGAAGAGCAGCCATGAGTCCAGCCTGAGGAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS GCA 72 bp CTCCTCCCCCAGCTGCCAGATCTCCAAAGGTCAGAGTaGCCCAGGGCTCCGTCCTTGATTCTCTTCTCTTTT +
Preference number: 6 (lower is better)
Translates to: LLPQLPDLQRSE*PRAPSLILFSF
Trigger: AAAAGAGAAGAGAATCAAGGACGGAGCCCTGGGGCACTCTGACCTTTGGAGATCTGGCAGCTGGGGGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CAA 72 bp CAGGCTGGACTCATGGCTGCTCTTCCTCCAGCTTTTTaGTTGGCTCCTCCCCCAGCTGCCAGATCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: QAGLMAALPPAF*LAPPPAARSPK
Trigger: CTTTGGAGATCTGGCAGCTGGGGGAGGAGCCAACAAAAAAGCTGGAGGAAGAGCAGCCATGAGTCCAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS TCA 72 bp AGAGTACCTTGGAAGAGCAACAGCCTAGGAAGATTCTaGCCTGCAGGAAGAGCGACTGTGCCGTCTCACTGG +
Preference number: 6 (lower is better)
Translates to: RVPWKSNSLGRF*PAGRATVPSHW
Trigger: CCAGTGAGACGGCACAGTCGCTCTTCCTGCAGGTCAGAATCTTCCTAGGCTGTTGCTCTTCCAAGGTACTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484079.1
CDS GCA 72 bp GGAATCACCTGCTTCCATGTCTCCCTGGGGCTTGGGTaGTGCGCAGTAACAGCAGTCCAAGAAGATGACATA +
Preference number: 6 (lower is better)
Translates to: GITCFHVSLGLG*CAVTAVQEDDI
Trigger: TATGTCATCTTCTTGGACTGCTGTTACTGCGCAGCACCCAAGCCCCAGGGAGACATGGAAGCAGGTGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS TCA 72 bp GGGATTCCCTCTCCTCTTCCAAGACAGGATCCTGGCTaGGATCAAACACTGTATTCTTGGAGGTTCCAGCAA +
Preference number: 6 (lower is better)
Translates to: GIPSPLPRQDPG*DQTLYSWRFQQ
Trigger: TTGCTGGAACCTCCAAGAATACAGTGTTTGATCTCAGCCAGGATCCTGTCTTGGAAGAGGAGAGGGAATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS GCA 72 bp GGAGGTTCCAGCAACAACAGGTCGACTTTTGAACAGTaGTGTCAACAGGGCATCATTGCAATCCAGTGCTTT +
Preference number: 6 (lower is better)
Translates to: GGSSNNRSTFEQ*CQQGIIAIQCF
Trigger: AAAGCACTGGATTGCAATGATGCCCTGTTGACAGCACTGTTCAAAAGTCGACCTGTTGTTGCTGGAACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS GCA 72 bp TTCAGGGTCGTGTCGAAAGGAATCTCAGGCTTTGGCTaGAACTCCAGGGAAGAGATGAAAACACTGTGTACA +
Preference number: 6 (lower is better)
Translates to: FRVVSKGISGFG*NSREEMKTLCT
Trigger: TGTACACAGTGTTTTCATCTCTTCCCTGGAGTTGCAGCCAAAGCCTGAGATTCCTTTCGACACGACCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CAA 72 bp TGTGACGTTGTGAAATGCACCATTGAGCTAATGCAGTaGCACTCCAAGGCTTCACAGAGGGAATGTGGCATG +
Preference number: 6 (lower is better)
Translates to: CDVVKCTIELMQ*HSKASQRECGM
Trigger: CATGCCACATTCCCTCTGTGAAGCCTTGGAGTGCAACTGCATTAGCTCAATGGTGCATTTCACAACGTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CAA 90 bp AGTGTCAGTCCATTAACTATTTGTTACCAGATCAGCTCTTCCATGTaGACTCCTTTTGGGACCATCTGTAGCAGAATGGCAGCGGTCTCC +
Preference number: 6 (lower is better)
Translates to: SVSPLTICYQISSSM*TPFGTICSRMAAVS
Trigger: GGAGACCGCTGCCATTCTGCTACAGATGGTCCCAAAAGGAGTCAACATGGAAGAGCTGATCTGGTAACAAATAGTTAATGGACTGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CAA 90 bp CTGCAGCACAGATGCAAATCTGGAAGCCACGTGACACTCACTGACTaGGGTGTCCGGGTATATGAATATCTGTTACCATTTGGAGTTTTT +
Preference number: 6 (lower is better)
Translates to: LQHRCKSGSHVTLTD*GVRVYEYLLPFGVF
Trigger: AAAAACTCCAAATGGTAACAGATATTCATATACCCGGACACCCAAGTCAGTGAGTGTCACGTGGCTTCCAGATTTGCATCTGTGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484079.1
CDS TCA 72 bp CAGGGCATCATTGCAATCCAGTGCTTTGAGAATTGCTaGACAAAAGCAAAGTGTCAGACTGTGTCACAGGGA +
Preference number: 6 (lower is better)
Translates to: QGIIAIQCFENC*TKAKCQTVSQG
Trigger: TCCCTGTGACACAGTCTGACACTTTGCTTTTGTTCAGCAATTCTCAAAGCACTGGATTGCAATGATGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS TCA 72 bp TATTCTTGGAGGTTCCAGCAACAACAGGTCGACTTTTaGACAGTGCTGTCAACAGGGCATCATTGCAATCCA +
Preference number: 6 (lower is better)
Translates to: YSWRFQQQQVDF*TVLSTGHHCNP
Trigger: TGGATTGCAATGATGCCCTGTTGACAGCACTGTTCAAAAGTCGACCTGTTGTTGCTGGAACCTCCAAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS GCA 72 bp CTGTGTACACGTGTCAGAATGCCAACTGCAATGGCATaGATGGATTGCTACAGTGACGAGGATTTGATTGAA +
Preference number: 6 (lower is better)
Translates to: LCTRVRMPTAMA*MDCYSDEDLIE
Trigger: TTCAATCAAATCCTCGTCACTGTAGCAATCCATGCATGCCATTGCAGTTGGCATTCTGACACGTGTACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CCA 72 bp TTCTCTTTTCCATGCACGCAGTGCCACTCAAAGCCTTaGTCTGCATACCAGTGTCAGTCCATTAACTATTTG +
Preference number: 6 (lower is better)
Translates to: FSFPCTQCHSKP*SAYQCQSINYL
Trigger: CAAATAGTTAATGGACTGACACTGGTATGCAGACCAAGGCTTTGAGTGGCACTGCGTGCATGGAAAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CCA 72 bp AGGGTTACTTGTGGATTGTTGTTGTCGAGAGCAAATTaGAGACTTCTAACATCTGGTCCAGCACTTTGCCAC +
Preference number: 6 (lower is better)
Translates to: RVTCGLLLSRAN*RLLTSGPALCH
Trigger: GTGGCAAAGTGCTGGACCAGATGTTAGAAGTCTCCAATTTGCTCTCGACAACAACAATCCACAAGTAACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CAA 90 bp CACTCAAAGCCTTGGTCTGCATACCAGTGTCAGTCCATTAACTATTaGTTACCAGATCAGCTCTTCCATGTTGACTCCTTTTGGGACCAT +
Preference number: 6 (lower is better)
Translates to: HSKPWSAYQCQSINY*LPDQLFHVDSFWDH
Trigger: ATGGTCCCAAAAGGAGTCAACATGGAAGAGCTGATCTGGTAACAAATAGTTAATGGACTGACACTGGTATGCAGACCAAGGCTTTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CAA 90 bp GGGGAAACAGAGATGACTTTTCTCAGGGTTACTTGTGGATTGTTGTaGTCGAGAGCAAATTGGAGACTTCTAACATCTGGTCCAGCACTT +
Preference number: 6 (lower is better)
Translates to: GETEMTFLRVTCGLL*SRANWRLLTSGPAL
Trigger: AAGTGCTGGACCAGATGTTAGAAGTCTCCAATTTGCTCTCGACAACAACAATCCACAAGTAACCCTGAGAAAAGTCATCTCTGTTTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CAA 90 bp AGTGGGGAAACAGAGATGACTTTTCTCAGGGTTACTTGTGGATTGTaGTTGTCGAGAGCAAATTGGAGACTTCTAACATCTGGTCCAGCA +
Preference number: 6 (lower is better)
Translates to: SGETEMTFLRVTCGL*LSRANWRLLTSGPA
Trigger: TGCTGGACCAGATGTTAGAAGTCTCCAATTTGCTCTCGACAACAACAATCCACAAGTAACCCTGAGAAAAGTCATCTCTGTTTCCCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CAA 90 bp ACCAGTGGGGAAACAGAGATGACTTTTCTCAGGGTTACTTGTGGATaGTTGTTGTCGAGAGCAAATTGGAGACTTCTAACATCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: TSGETEMTFLRVTCG*LLSRANWRLLTSGP
Trigger: TGGACCAGATGTTAGAAGTCTCCAATTTGCTCTCGACAACAACAATCCACAAGTAACCCTGAGAAAAGTCATCTCTGTTTCCCCACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CCA 72 bp GTACAAAAGAGTAGTAGCCATGGTGACCAGAAACCTTaGAATCATTTTTCACAGTTCAGCTTCCCAGTCCTC +
Preference number: 6 (lower is better)
Translates to: VQKSSSHGDQKP*NHFSQFSFPVL
Trigger: GAGGACTGGGAAGCTGAACTGTGAAAAATGATTCCAAGGTTTCTGGTCACCATGGCTACTACTCTTTTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CAA 72 bp AGATGCAAATCTGGAAGCCACGTGACACTCACTGACTaGGGTGTCCGGGTATATGAATATCTGTTACCATTT +
Preference number: 6 (lower is better)
Translates to: RCKSGSHVTLTD*GVRVYEYLLPF
Trigger: AAATGGTAACAGATATTCATATACCCGGACACCCAAGTCAGTGAGTGTCACGTGGCTTCCAGATTTGCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484079.1
CDS CAA 72 bp CAGTGGGGAAACAGAGATGACTTTTCTCAGGGTTACTaGTGGATTGTTGTTGTCGAGAGCAAATTGGAGACT +
Preference number: 6 (lower is better)
Translates to: QWGNRDDFSQGY*WIVVVESKLET
Trigger: AGTCTCCAATTTGCTCTCGACAACAACAATCCACAAGTAACCCTGAGAAAAGTCATCTCTGTTTCCCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CAA 90 bp CAAGGCTTCACAGAGGGAATGTGGCATGCTGGTCCCATTCTGTGTTaGATTTGCTTGATGGTAATAGGAGAGTTATTTCAACTCTCTTTC +
Preference number: 6 (lower is better)
Translates to: QGFTEGMWHAGPILC*ICLMVIGELFQLSF
Trigger: GAAAGAGAGTTGAAATAACTCTCCTATTACCATCAAGCAAATCAAACACAGAATGGGACCAGCATGCCACATTCCCTCTGTGAAGCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CCA 72 bp GATATTAAAAAGTCCTCCCACCAACTAGGTAAACATTaGCCACATCACAGAGCTGGTATGTTATTGCAGAGC +
Preference number: 6 (lower is better)
Translates to: DIKKSSHQLGKH*PHHRAGMLLQS
Trigger: GCTCTGCAATAACATACCAGCTCTGTGATGTGGCCAATGTTTACCTAGTTGGTGGGAGGACTTTTTAATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CAA 72 bp CCTTGGTCTGCATACCAGTGTCAGTCCATTAACTATTaGTTACCAGATCAGCTCTTCCATGTTGACTCCTTT +
Preference number: 6 (lower is better)
Translates to: PWSAYQCQSINY*LPDQLFHVDSF
Trigger: AAAGGAGTCAACATGGAAGAGCTGATCTGGTAACAAATAGTTAATGGACTGACACTGGTATGCAGACCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CAA 72 bp GGGAATGTGGCATGCTGGTCCCATTCTGTGTTTGATTaGCTTGATGGTAATAGGAGAGTTATTTCAACTCTC +
Preference number: 6 (lower is better)
Translates to: GNVACWSHSVFD*LDGNRRVISTL
Trigger: GAGAGTTGAAATAACTCTCCTATTACCATCAAGCAAATCAAACACAGAATGGGACCAGCATGCCACATTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS GCA 72 bp GTCTTCTGGCTCATTCTGGGTGTTGAAGGAATCACCTaGATTCAAAGAAGAAACCTTGTGTTGTGTATAAGT +
Preference number: 6 (lower is better)
Translates to: VFWLILGVEGIT*IQRRNLVLCIS
Trigger: ACTTATACACAACACAAGGTTTCTTCTTTGAATGCAGGTGATTCCTTCAACACCCAGAATGAGCCAGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356609.2
CDS CAA 72 bp ACAGAGGGAATGTGGCATGCTGGTCCCATTCTGTGTTaGATTTGCTTGATGGTAATAGGAGAGTTATTTCAA +
Preference number: 6 (lower is better)
Translates to: TEGMWHAGPILC*ICLMVIGELFQ
Trigger: TTGAAATAACTCTCCTATTACCATCAAGCAAATCAAACACAGAATGGGACCAGCATGCCACATTCCCTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CAA 90 bp ATTATTTACCAGTGGGGAAACAGAGATGACTTTTCTCAGGGTTACTaGTGGATTGTTGTTGTCGAGAGCAAATTGGAGACTTCTAACATC +
Preference number: 6 (lower is better)
Translates to: IIYQWGNRDDFSQGY*WIVVVESKLETSNI
Trigger: GATGTTAGAAGTCTCCAATTTGCTCTCGACAACAACAATCCACAAGTAACCCTGAGAAAAGTCATCTCTGTTTCCCCACTGGTAAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS TCA 72 bp CAATGGCATGCATGGATTGCTACAGTGACGAGGATTTaGTTGAACAATGGGATCTTCTTCACAAGTAGTTTT +
Preference number: 6 (lower is better)
Translates to: QWHAWIATVTRI*LNNGIFFTSSF
Trigger: AAAACTACTTGTGAAGAAGATCCCATTGTTCAATCAAATCCTCGTCACTGTAGCAATCCATGCATGCCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS CAA 72 bp GAAACAGAGATGACTTTTCTCAGGGTTACTTGTGGATaGTTGTTGTCGAGAGCAAATTGGAGACTTCTAACA +
Preference number: 6 (lower is better)
Translates to: ETEMTFLRVTCG*LLSRANWRLLT
Trigger: TGTTAGAAGTCTCCAATTTGCTCTCGACAACAACAATCCACAAGTAACCCTGAGAAAAGTCATCTCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484239.5
CDS TCA 72 bp CAGGTTTCAATATGGACAATTTGTGATGATCTGAGATaGAGTTGTGACGTTGTGAAATGCACCATTGAGCTA +
Preference number: 6 (lower is better)
Translates to: QVSIWTICDDLR*SCDVVKCTIEL
Trigger: TAGCTCAATGGTGCATTTCACAACGTCACAACTTCATCTCAGATCATCACAAATTGTCCATATTGAAACCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484239.5