Pregenerated sensors for SLC30A1 (Homo sapiens)
Ensembl gene IDs: ENSG00000170385Ensembl transcript IDs: ENST00000367001.5
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCAAACTGCATTAACCTTCTGGTTTTCTTTCCTCTCAAGTCAGTaGCTCTTAGAAAGCACAAACATTGCTGGTTGTGCTCAAAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: IQTALTFWFSFLSSQ*LLESTNIAGCAQKA Trigger: AGCTTTTTGAGCACAACCAGCAATGTTTGTGCTTTCTAAGAGTCACTGACTTGAGAGGAAAGAAAACCAGAAGGTTAATGCAGTTTGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR CCA 90 bp | ATTTTATCTGCATCTGTATTTAATGAGATGATAACTGCATTTAACTaGCCCACATCTGGCCCAAAGGACAGGCAACAGAAGACACAAAAC | + |
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Preference number: 1 (lower is better) Translates to: ILSASVFNEMITAFN*PTSGPKDRQQKTQN Trigger: GTTTTGTGTCTTCTGTTGCCTGTCCTTTGGGCCAGATGTGGGCCAGTTAAATGCAGTTATCATCTCATTAAATACAGATGCAGATAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR TCA 90 bp | CTTGGTTTTAATTCAGGCACATGCAGCACCTCCTTTTCACTAAACTaGGACAACAGACAAGTTTCTAAACACATATTCTACACTGATCTT | + |
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Preference number: 1 (lower is better) Translates to: LGFNSGTCSTSFSLN*DNRQVSKHIFYTDL Trigger: AAGATCAGTGTAGAATATGTGTTTAGAAACTTGTCTGTTGTCTCAGTTTAGTGAAAAGGAGGTGCTGCATGTGCCTGAATTAAAACCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR TCA 90 bp | GATGTTAATAAGACACAAACGGTTAACACAGCCTTCTACCTACTGTaGTTTTCCAAGGTGCATTTGATGGACATTTTTCCTATTCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: DVNKTQTVNTAFYLL*FSKVHLMDIFPIQV Trigger: AACTTGAATAGGAAAAATGTCCATCAAATGCACCTTGGAAAATCACAGTAGGTAGAAGGCTGTGTTAACCGTTTGTGTCTTATTAACATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR-3UTR GCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATCAAAAGGTGAGTCAGTaGCCACTGTTTCTGCCGACA | + |
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Preference number: 2 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHQKVSQ*PLFLPT Trigger: TGTCGGCAGAAACAGTGGGCACTGACTCACCTTTTG...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR-3UTR TCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATCTAAAACTCAAAAGGTaGGTCAGTGCCCACTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: IITEYTDTLHCAVSRQNHLKLKR*VSAHCF Trigger: GAAACAGTGGGCACTGACTCACCTTTTGAGTTTTAG...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR-3UTR TCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATTTCCTCTCAAGTCAGTaGCTCTTAGAAAGCACAAAC | + |
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Preference number: 2 (lower is better) Translates to: IITEYTDTLHCAVSRQNHFLSSQ*LLESTN Trigger: GTTTGTGCTTTCTAAGAGTCACTGACTTGAGAGGAA...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTGAAGATCTGAGTATGTaGAGACAGGATGACTTACAA | + |
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Preference number: 2 (lower is better) Translates to: QVMVLAHYSKCELTNCVPEDLSM*RQDDLQ Trigger: TTGTAAGTCATCCTGTCTTCACATACTCAGATCTTC...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR-3UTR TCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATCACTATTGGAAGATCTaGGTATGTGAAGACAGGATG | + |
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Preference number: 2 (lower is better) Translates to: IITEYTDTLHCAVSRQNHHYWKI*VCEDRM Trigger: CATCCTGTCTTCACATACTCAGATCTTCCAATAGTG...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR-3UTR GCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATAGAAAGCACAAACATTaGTGGTTGTGCTCAAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHRKHKH*WLCSKS Trigger: GCTTTTTGAGCACAACCAGCAATGTTTGTGCTTTCT...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR-3UTR CCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATAGATGTATTGCAAACTaGCAGGTTATGGTTTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: IITEYTDTLHCAVSRQNHRCIAN*QVMVLA Trigger: GGCCAAAACCATAACCTGCCAGTTTGCAATACATCT...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR CAA 90 bp | ATAGAATTAAACTGTGTGACCAGACAAGGACTTCAATTACACTACTaGGCAAACTTAGAATTTCAGTGGAGTCTTTTTCCTCTTGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: IELNCVTRQGLQLHY*ANLEFQWSLFPLAV Trigger: AACTGCAAGAGGAAAAAGACTCCACTGAAATTCTAAGTTTGCCAAGTAGTGTAATTGAAGTCCTTGTCTGGTCACACAGTTTAATTCTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR-3UTR GCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATGTAAACTTTCTTCCTTaGTCTTACTACCCCATTTGC | + |
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Preference number: 2 (lower is better) Translates to: IITEYTDTLHCAVSRQNHVNFLP*SYYPIC Trigger: GCAAATGGGGTAGTAAGAGCAAGGAAGAAAGTTTAC...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR-3UTR CCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATGGCAGGTTATGGTTTTaGCCCATTATAGTAAATGTG | + |
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Preference number: 2 (lower is better) Translates to: IITEYTDTLHCAVSRQNHGRLWF*PIIVNV Trigger: CACATTTACTATAATGGGCCAAAACCATAACCTGCC...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR-3UTR CCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATAACTTAGAATTTCAGTaGAGTCTTTTTCCTCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: IITEYTDTLHCAVSRQNHNLEFQ*SLFPLA Trigger: TGCAAGAGGAAAAAGACTCCACTGAAATTCTAAGTT...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR CCA 72 bp | GCATCTGTATTTAATGAGATGATAACTGCATTTAACTaGCCCACATCTGGCCCAAAGGACAGGCAACAGAAG | + |
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Preference number: 3 (lower is better) Translates to: ASVFNEMITAFN*PTSGPKDRQQK Trigger: CTTCTGTTGCCTGTCCTTTGGGCCAGATGTGGGCCAGTTAAATGCAGTTATCATCTCATTAAATACAGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR-3UTR CAA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATCCCTCCAGCATCTTTTaGCCAAAGACACTGGACCAT | + |
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Preference number: 3 (lower is better) Translates to: IITEYTDTLHCAVSRQNHPSSIF*PKTLDH Trigger: ATGGTCCAGTGTCTTTGGCAAAAAGATGCTGGAGGG...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR-3UTR CAA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATCACAAACATTGCTGGTaGTGCTCAAAAAGCTCCATT | + |
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Preference number: 3 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHHKHCW*CSKSSI Trigger: AATGGAGCTTTTTGAGCACAACCAGCAATGTTTGTG...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR-3UTR CAA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTGGAGTCTTTTTCCTCTaGCAGTTTAAAGCAAAAGTC | + |
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Preference number: 3 (lower is better) Translates to: QVMVLAHYSKCELTNCVPGVFFL*QFKAKV Trigger: GACTTTTGCTTTAAACTGCAAGAGGAAAAAGACTCC...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR-3UTR CAA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATGGTAAACTTTCTTCCTaGCTCTTACTACCCCATTTG | + |
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Preference number: 3 (lower is better) Translates to: IITEYTDTLHCAVSRQNHGKLSS*LLLPHL Trigger: CAAATGGGGTAGTAAGAGCAAGGAAGAAAGTTTACC...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR CCA 72 bp | GATCAAGATGTATTGCAAACTGGCAGGTTATGGTTTTaGCCCATTATAGTAAATGTGAACTTACAAACTGTG | + |
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Preference number: 3 (lower is better) Translates to: DQDVLQTGRLWF*PIIVNVNLQTV Trigger: CACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTGCCAGTTTGCAATACATCTTGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR-3UTR CAA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATAGATATTGTGGCATCTaGCAAAATAAGCCACTATTG | + |
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Preference number: 3 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHRYCGI*QNKPLL Trigger: CAATAGTGGCTTATTTTGCAAGATGCCACAATATCT...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR-3UTR CAA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATAAAGATCAAGATGTATaGCAAACTGGCAGGTTATGG | + |
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Preference number: 3 (lower is better) Translates to: IITEYTDTLHCAVSRQNHKDQDV*QTGRLW Trigger: CCATAACCTGCCAGTTTGCAATACATCTTGATCTTT...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| 3UTR TCA 72 bp | TTTAATAGCCAGCAATACAGAATACAGGATAGTAACTaGTCTTATTTCCTACTAATAGCCATGAGTCACTCT | + |
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Preference number: 3 (lower is better) Translates to: FNSQQYRIQDSN*SYFLLIAMSHS Trigger: AGAGTGACTCATGGCTATTAGTAGGAAATAAGATCAGTTACTATCCTGTATTCTGTATTGCTGGCTATTAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR TCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATCGTTCGGGAAACCGCTaGGGGGCCCCCGCGGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHRSGNR*GAPAAA Trigger: TGCGGCCGCGGGGGCCCCTCAGCGGTTTCCCGAACG...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR TCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATCGCCCGGGGCCACGTTaGTGTCGCTGCTCCCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHRPGPR*CRCSRG Trigger: GCCCCGGGAGCAGCGACATCAACGTGGCCCCGGGCG...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR TCA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTAGAGCCCCAGCACGTTaGCCAGCAGCCCGGCCACGC | + |
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Preference number: 4 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCRAPAR*PAARPR Trigger: GCGTGGCCGGGCTGCTGGTCAACGTGCTGGGGCTCT...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR GCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATCCAACACCCCATGGCTaGGGCTGCGGGGCCCGCCGA | + |
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Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHPTPHG*GCGARR Trigger: TCGGCGGGCCCCGCAGCCGCAGCCATGGGGTGTTGG...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR GCA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTTCCTGGTCGGGACCCTaGTCGCCCGGGGCCACGTTG | + |
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Preference number: 4 (lower is better) Translates to: QVMVLAHYSKCELTNCVPSWSGP*SPGATL Trigger: CAACGTGGCCCCGGGCGAGCAGGGTCCCGACCAGGA...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR GCA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTAGGTCAGCGCCAGCATaGACAGCAGCCGGCCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: QVMVLAHYSKCELTNCVPRSAPA*TAAGPG Trigger: ACCGGGGCCGGCTGCTGTGCATGCTGGCGCTGACCT...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CCA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTGAGGGCTCTGCTTGCTaGTCTCCTCTGCGGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCEGSAC*SPLRRL Trigger: CAGCCGCCGCAGAGGAGACCAGCAAGCAGAGCCCTC...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CCA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTTTCTTCTGGGTGGCGTaGGTCCGCCGGGCGAAGCGC | + |
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Preference number: 4 (lower is better) Translates to: QVMVLAHYSKCELTNCVPFFWVA*VRRAKR Trigger: GCGCTTCGCCCGGCGGACCCACGCCACCCAGAAGAA...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CCA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTGTGTTGGTCTCCTCCTaGTCGGGACCCTGCTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCVLVSS*SGPCSP Trigger: GGGCGAGCAGGGTCCCGACCAGGAGGAGACCAACAC...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR TCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATGGCCGGAGTCCTGGCTaGAGCCGCTGTGATGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHGRSPG*SRCDGG Trigger: TCCACCATCACAGCGGCTTCAGCCAGGACTCCGGCC...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CCA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTCTCCTCTGCGGCGGCTaGACTGAGGAGCGGATGGCT | + |
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Preference number: 4 (lower is better) Translates to: QVMVLAHYSKCELTNCVPLLCGG*TEERMA Trigger: AGCCATCCGCTCCTCAGTCCAGCCGCCGCAGAGGAG...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CCA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTCCGAACGTGTTCTTCTaGGTGGCGTGGGTCCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: QVMVLAHYSKCELTNCVPPNVFF*VAWVRR Trigger: CCGGCGGACCCACGCCACCCAGAAGAACACGTTCGG...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR TCA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTTGGCTGAAGCCGCTGTaGTGGTGGAAGAGGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCWLKPL*WWKRQS Trigger: GCTCTGCCTCTTCCACCATCACAGCGGCTTCAGCCA...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR GCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATGGCTGCTGCATCTCGTaGGGCTCGATGAAGCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHGCCIS*GSMKRS Trigger: CGAGCGCTTCATCGAGCCGCACGAGATGCAGCAGCC...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR GCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATACCACCAGCGGCTGCTaGATCTCGTGCGGCTCGATG | + |
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Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHTTSGC*ISCGSM Trigger: CATCGAGCCGCACGAGATGCAGCAGCCGCTGGTGGT...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR GCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATAGGACCACCAGCGGCTaGTGCATCTCGTGCGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: IITEYTDTLHCAVSRQNHRTTSG*CISCGS Trigger: CGAGCCGCACGAGATGCAGCAGCCGCTGGTGGTCCT...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATACGTGTTCTTCTGGGTaGCGTGGGTCCGCCGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: IITEYTDTLHCAVSRQNHTCSSG*RGSAGR Trigger: TCGCCCGGCGGACCCACGCCACCCAGAAGAACACGT...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR TCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATTCTCGTGCGGCTCGATaGAGCGCTCGATGGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: IITEYTDTLHCAVSRQNHSRAAR*SARWPP Trigger: TGGAGGCCATCGAGCGCTTCATCGAGCCGCACGAGA...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CCA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTGGCCAGTCAGGAAGATaGCGTTCACCAGAGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: QVMVLAHYSKCELTNCVPGQSGR*RSPEPP Trigger: TGGGGGCTCTGGTGAACGCCATCTTCCTGACTGGCC...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATTGGCCACCAGGGTGTTaGTCTCCTCCTGGTCGGGAC | + |
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Preference number: 4 (lower is better) Translates to: IITEYTDTLHCAVSRQNHWPPGC*SPPGRD Trigger: GTCCCGACCAGGAGGAGACCAACACCCTGGTGGCCA...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR GCA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTTCAGCCCGTTGGAGTTaGTGGTATTGGCCACCAGGG | + |
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Preference number: 4 (lower is better) Translates to: QVMVLAHYSKCELTNCVPSARWS*WYWPPG Trigger: CCCTGGTGGCCAATACCAGCAACTCCAACGGGCTGA...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATTGGCCTCCAGCAGGATaGCGAAACAGAGGCCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHWPPAG*RNRGQS Trigger: TGACTGGCCTCTGTTTCGCCATCCTGCTGGAGGCCA...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR TCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATAAAGCTCCGAGCATCTaGGGGCTCTGCTTGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IITEYTDTLHCAVSRQNHKAPSI*GLCLLV Trigger: GACCAGCAAGCAGAGCCCTCAGATGCTCGGAGCTTT...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR CCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATGCCCGTTGGAGTTGCTaGTATTGGCCACCAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IITEYTDTLHCAVSRQNHARWSC*YWPPGC Trigger: ACACCCTGGTGGCCAATACCAGCAACTCCAACGGGC...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR CCA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTTGGAGTTGCTGGTATTaGCCACCAGGGTGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVMVLAHYSKCELTNCVPWSCWY*PPGCWS Trigger: AGACCAACACCCTGGTGGCCAATACCAGCAACTCCA...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR CCA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTCCAATTTCAGCCCGTTaGAGTTGCTGGTATTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCPISAR*SCWYWP Trigger: TGGCCAATACCAGCAACTCCAACGGGCTGAAATTGG...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR GCA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTAAGCACACTGGGTTCTaGAGGCAAGTTCACACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QVMVLAHYSKCELTNCVPKHTGF*RQVHTE Trigger: TTCCGTGTGAACTTGCCTGCAGAACCCAGTGTGCTT...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR CCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATCTGTATCACCACTTCTaGGGTTTTCTGGGTCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IITEYTDTLHCAVSRQNHLYHHF*GFLGLR Trigger: CCGCAGACCCAGAAAACCCCAGAAGTGGTGATACAG...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR TCA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTCATAAAGCCTCATGGTaGGGTAGGAACAGCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QVMVLAHYSKCELTNCVPHKASW*GRNSFG Trigger: TCCAAAGCTGTTCCTACCTCACCATGAGGCTTTATG...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR GCA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTCCTCCAGCATCTTTTTaGCAAAGACACTGGACCATA | + |
|
Preference number: 4 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCPPASF*QRHWTI Trigger: TATGGTCCAGTGTCTTTGGCAAAAAGATGCTGGAGG...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR CCA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTGGGGTCAGGGAAACATaGATTCACACAAAAATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVMVLAHYSKCELTNCVPGVRET*IHTKIP Trigger: GGGGATTTTTGTGTGAATCCATGTTTCCCTGACCCC...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR CCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATTGCTTCAAAGCACACTaGGTTCTGCAGGCAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHCFKAH*VLQASS Trigger: TGAACTTGCCTGCAGAACCCAGTGTGCTTTGAAGCA...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR CCA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTATAACTGCATTTAACTaGCCCACATCTGGCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCITAFN*PTSGPK Trigger: CTTTGGGCCAGATGTGGGCCAGTTAAATGCAGTTAT...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR TCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATTACTACTACAATCACTaGACCCAAGGCATCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHYYYNH*TQGISK Trigger: CTTGGAGATGCCTTGGGTTCAGTGATTGTAGTAGTA...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR TCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATTGTGAGCAGTGGCAATaGTTCTGCTTCCAGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IITEYTDTLHCAVSRQNHCEQWQ*FCFQQV Trigger: AACTTGCTGGAAGCAGAATCATTGCCACTGCTCACA...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR TCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATACACGGAACTACACTTaGTTTAGAGCCTACACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHTRNYT*FRAYTS Trigger: GCTAGTGTAGGCTCTAAATCAAGTGTAGTTCCGTGT...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR TCA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTCACTATTGGAAGATCTaGGTATGTGAAGACAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCHYWKI*VCEDRM Trigger: CATCCTGTCTTCACATACTCAGATCTTCCAATAGTG...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR TCA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTTCTTGTTCGCCCAGATaGGATCCCTCAATTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: QVMVLAHYSKCELTNCVPSCSPR*DPSISC Trigger: ACATGAAATTGAGGGATCTCATCTGGGCGAACAAGA...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR TCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATCTAAAACTCAAAAGGTaGGTCAGTGCCCACTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHLKLKR*VSAHCF Trigger: GAAACAGTGGGCACTGACTCACCTTTTGAGTTTTAG...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR TCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATGCCTTCTACCTACTGTaGTTTTCCAAGGTGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHAFYLL*FSKVHL Trigger: CAAATGCACCTTGGAAAATCACAGTAGGTAGAAGGC...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR GCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATGCATCTCCAAGGACATaGAGAAAAACTCCACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: IITEYTDTLHCAVSRQNHASPRT*RKTPRM Trigger: CATGCGTGGAGTTTTTCTGCATGTCCTTGGAGATGC...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR CCA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTAGAAATGCTAACTGCTaGGGTCTTTTCTGCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCRNANC*GLFCIL Trigger: AAGGATGCAGAAAAGACCCCAGCAGTTAGCATTTCT...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR TCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATAGCCACCTCCATGTATaGTGTTGGATCTTCACATTT | + |
|
Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHSHLHV*CWIFTF Trigger: AAATGTGAAGATCCAACATCATACATGGAGGTGGCT...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR GCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATTTTCTACAAATGCTTTaGAGGGGTCAGGGAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHFLQML*RGQGNM Trigger: CATGTTTCCCTGACCCCTGCAAAGCATTTGTAGAAA...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR GCA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTTCTTACTACCCCATTTaGCCCATTGTGTGTAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QVMVLAHYSKCELTNCVPSYYPI*PIVCKL Trigger: CAGTTTACACACAATGGGGCAAATGGGGTAGTAAGA...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR GCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATAGTGCCCACTGTTTCTaGCGACAGTCATTTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHSAHCF*RQSFEK Trigger: TTTTTCAAATGACTGTCGGCAGAAACAGTGGGCACT...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR CCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATTCTTCCAGTTCCATATaGTCAGGTTCTCTGACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHSSSSI*SGSLTR Trigger: TCTTGTCAGAGAACCTGACCATATGGAACTGGAAGA...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR CCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATAGATGTATTGCAAACTaGCAGGTTATGGTTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHRCIAN*QVMVLA Trigger: GGCCAAAACCATAACCTGCCAGTTTGCAATACATCT...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| 3UTR CAA 72 bp | AACTGTGTGACCAGACAAGGACTTCAATTACACTACTaGGCAAACTTAGAATTTCAGTGGAGTCTTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NCVTRQGLQLHY*ANLEFQWSLFP Trigger: AGGAAAAAGACTCCACTGAAATTCTAAGTTTGCCAAGTAGTGTAATTGAAGTCCTTGTCTGGTCACACAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR TCA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTTATGGTCAGGTTCTCTaGCAAGATTTCCATTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: QVMVLAHYSKCELTNCVPYGQVL*QDFHSL Trigger: AAGTGAATGGAAATCTTGTCAGAGAACCTGACCATA...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR TCA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTACCAGCCTCATAAACTaGTGCATGAGTACTATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCTSLIN*CMSTIN Trigger: ATTAATAGTACTCATGCATCAGTTTATGAGGCTGGT...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR TCA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTAAATCCTCATTCAGTTaGTGTCTTGTACTTAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCKSSFS*CLVLRC Trigger: ACACCTAAGTACAAGACATCAACTGAATGAGGATTT...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR GCA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTAATTATTTCTACAAATaGTTTGCAGGGGTCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCNYFYK*FAGVRE Trigger: TTCCCTGACCCCTGCAAAGCATTTGTAGAAATAATT...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR GCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATACAAGAAATGCTAACTaGTGGGGTCTTTTCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: IITEYTDTLHCAVSRQNHTRNAN*WGLFCI Trigger: GATGCAGAAAAGACCCCAGCAGTTAGCATTTCTTGT...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR GCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATTTTAATTCAGGCACATaGAGCACCTCCTTTTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHFNSGT*STSFSL Trigger: TAGTGAAAAGGAGGTGCTGCATGTGCCTGAATTAAA...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR CCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATGGCAGGTTATGGTTTTaGCCCATTATAGTAAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHGRLWF*PIIVNV Trigger: CACATTTACTATAATGGGCCAAAACCATAACCTGCC...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR TCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATCAAACATGTAATTCATaGACTTCCTCAACTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHQTCNS*TSSTPS Trigger: TGAAGGAGTTGAGGAAGTTCATGAATTACATGTTTG...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR TCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATGAAGATCTGAGTATGTaGAGACAGGATGACTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: IITEYTDTLHCAVSRQNHEDLSM*RQDDLQ Trigger: TTGTAAGTCATCCTGTCTTCACATACTCAGATCTTC...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR TCA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATTCCTTTTCACTAAACTaGGACAACAGACAAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHSFSLN*DNRQVS Trigger: AGAAACTTGTCTGTTGTCTCAGTTTAGTGAAAAGGA...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR TCA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTTTTCCAAGGTGCATTTaGTGGACATTTTTCCTATTC | + |
|
Preference number: 4 (lower is better) Translates to: QVMVLAHYSKCELTNCVPFPRCI*WTFFLF Trigger: GAATAGGAAAAATGTCCATCAAATGCACCTTGGAAA...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR CCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATCAAACTGGCAGGTTATaGTTTTGGCCCATTATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IITEYTDTLHCAVSRQNHQTGRL*FWPIIV Trigger: TACTATAATGGGCCAAAACCATAACCTGCCAGTTTG...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR CCA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTAGGCTGCATTTGGCTTaGAAAAATTTCTTGGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCRLHLA*KNFLVL Trigger: TAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCT...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR TCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATAATCAGGAATGTACATaGTACAGTACAATTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: IITEYTDTLHCAVSRQNHNQECT*YSTIHS Trigger: GCTGTGAATTGTACTGTATCATGTACATTCCTGATT...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR GCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATGATATTGTGGCATCTTaGAAAATAAGCCACTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: IITEYTDTLHCAVSRQNHDIVAS*KISHYW Trigger: CCAATAGTGGCTTATTTTGCAAGATGCCACAATATC...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR CCA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTAACTTAGAATTTCAGTaGAGTCTTTTTCCTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QVMVLAHYSKCELTNCVPNLEFQ*SLFPLA Trigger: TGCAAGAGGAAAAAGACTCCACTGAAATTCTAAGTT...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| 3UTR CAA 72 bp | AGATCAAGATGTATTGCAAACTGGCAGGTTATGGTTTaGGCCCATTATAGTAAATGTGAACTTACAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSRCIANWQVMV*AHYSKCELTNC Trigger: ACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTGCCAGTTTGCAATACATCTTGATCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| 3UTR CAA 72 bp | AATGGAGAATTAAATCTCTCATCACTAAGGCTGCATTaGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NGELNLSSLRLH*AWKNFLVLIQA Trigger: TGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGATGAGAGATTTAATTCTCCATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS-3UTR CCA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATGGCAGAACCATAACATaGCAATTTGTGTCTTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: IITEYTDTLHCAVSRQNHGRTIT*QFVSFY Trigger: ATAAAAAGACACAAATTGCCATGTTATGGTTCTGCC...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367001.5 |
||
| CDS CCA 90 bp | ATTACCTCGGCTCGGATCCAGCCGAACGTGTTCTTCTGGGTGGCGTaGGTCCGCCGGGCGAAGCGCTCGGCCACCAGCGCCACCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ITSARIQPNVFFWVA*VRRAKRSATSATTS Trigger: GCTGGTGGTGGCGCTGGTGGCCGAGCGCTTCGCCCGGCGGACCCACGCCACCCAGAAGAACACGTTCGGCTGGATCCGAGCCGAGGTAAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS GCA 90 bp | CCGGCCACGCCGACCCCAAGGACCACCAGCGGCTGCTGCATCTCGTaGGGCTCGATGAAGCGCTCGATGGCCTCCAGCAGGATGGCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PATPTPRTTSGCCIS*GSMKRSMASSRMAK Trigger: TTTCGCCATCCTGCTGGAGGCCATCGAGCGCTTCATCGAGCCGCACGAGATGCAGCAGCCGCTGGTGGTCCTTGGGGTCGGCGTGGCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CCA 90 bp | TCCGAGCATCTGAGGGCTCTGCTTGCTGGTCTCCTCTGCGGCGGCTaGACTGAGGAGCGGATGGCTGAGGAGCTAGAGAGGCGGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SEHLRALLAGLLCGG*TEERMAEELERRRP Trigger: TGGCCGCCGCCTCTCTAGCTCCTCAGCCATCCGCTCCTCAGTCCAGCCGCCGCAGAGGAGACCAGCAAGCAGAGCCCTCAGATGCTCGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS TCA 90 bp | CGACCCCAAGGACCACCAGCGGCTGCTGCATCTCGTGCGGCTCGATaGAGCGCTCGATGGCCTCCAGCAGGATGGCGAAACAGAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RPQGPPAAAASRAAR*SARWPPAGWRNRGQ Trigger: CTGGCCTCTGTTTCGCCATCCTGCTGGAGGCCATCGAGCGCTTCATCGAGCCGCACGAGATGCAGCAGCCGCTGGTGGTCCTTGGGGTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS GCA 90 bp | CGAGAAAGCTCCGAGCATCTGAGGGCTCTGCTTGCTGGTCTCCTCTaGGGCGGCTGGACTGAGGAGCGGATGGCTGAGGAGCTAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RESSEHLRALLAGLL*GGWTEERMAEELER Trigger: CCTCTCTAGCTCCTCAGCCATCCGCTCCTCAGTCCAGCCGCCGCAGAGGAGACCAGCAAGCAGAGCCCTCAGATGCTCGGAGCTTTCTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CCA 90 bp | CTGGGTCTGCGGGGTCCAATTTCAGCCCGTTGGAGTTGCTGGTATTaGCCACCAGGGTGTTGGTCTCCTCCTGGTCGGGACCCTGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LGLRGPISARWSCWY*PPGCWSPPGRDPAR Trigger: GCGAGCAGGGTCCCGACCAGGAGGAGACCAACACCCTGGTGGCCAATACCAGCAACTCCAACGGGCTGAAATTGGACCCCGCAGACCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTCAGAGCCCCAGCACGTaGACCAGCAGCCCGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCQSPST*TSSPAT Trigger: CGTGGCCGGGCTGCTGGTCAACGTGCTGGGGCTCTG...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTTCGCCCGGGGCCACGTaGATGTCGCTGCTCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QVMVLAHYSKCELTNCVPSPGAT*MSLLPG Trigger: CCCCGGGAGCAGCGACATCAACGTGGCCCCGGGCGA...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTTTAACGCGAGGCCCCTaGGGGAGGCCGTGGCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QVMVLAHYSKCELTNCVPLTRGP*GRPWPW Trigger: CCACGGCCACGGCCTCCCCAAGGGGCCTCGCGTTAA...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATTTGGCCACCAGGGTGTaGGTCTCCTCCTGGTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHLATRV*VSSWSG Trigger: TCCCGACCAGGAGGAGACCAACACCCTGGTGGCCAA...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATTTCAGCCCGTTGGAGTaGCTGGTATTGGCCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHFSPLE*LVLATR Trigger: CCTGGTGGCCAATACCAGCAACTCCAACGGGCTGAA...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS TCA 90 bp | GTTGTCCAGCCCTATCTTCTTCCAGTTCCATATGGTCAGGTTCTCTaGCAAGATTTCCATTCACTTGTACTTCCACTGTATCACCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVQPYLLPVPYGQVL*QDFHSLVLPLYHHF Trigger: GAAGTGGTGATACAGTGGAAGTACAAGTGAATGGAAATCTTGTCAGAGAACCTGACCATATGGAACTGGAAGAAGATAGGGCTGGACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS GCA 90 bp | GCATTTACTACTACAATCACTGAACCCAAGGCATCTCCAAGGACATaGAGAAAAACTCCACGCATGTTAAGTTGTCCAGCCCTATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AFTTTITEPKASPRT*RKTPRMLSCPALSS Trigger: AGAAGATAGGGCTGGACAACTTAACATGCGTGGAGTTTTTCTGCATGTCCTTGGAGATGCCTTGGGTTCAGTGATTGTAGTAGTAAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTTTGGAGTTGCTGGTATaGGCCACCAGGGTGTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QVMVLAHYSKCELTNCVPLELLV*ATRVLV Trigger: GACCAACACCCTGGTGGCCAATACCAGCAACTCCAA...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATTCCAATTTCAGCCCGTaGGAGTTGCTGGTATTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IITEYTDTLHCAVSRQNHSNFSP*ELLVLA Trigger: GGCCAATACCAGCAACTCCAACGGGCTGAAATTGGA...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTTCCACGCATGTTAAGTaGTCCAGCCCTATCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCSTHVK*SSPIFF Trigger: GAAGAAGATAGGGCTGGACAACTTAACATGCGTGGA...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTGGTAAACTTTCTTCCTaGCTCTTACTACCCCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCGKLSS*LLLPHL Trigger: CAAATGGGGTAGTAAGAGCAAGGAAGAAAGTTTACC...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTGGAGTCTTTTTCCTCTaGCAGTTTAAAGCAAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCGVFFL*QFKAKV Trigger: GACTTTTGCTTTAAACTGCAAGAGGAAAAAGACTCC...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATACCCCATTTGCCCCATaGTGTGTAAACTGTAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IITEYTDTLHCAVSRQNHTPFAP*CVNCSS Trigger: TGAACTACAGTTTACACACAATGGGGCAAATGGGGT...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | AACATAGTGTTAAAACTGGCTTTCCAAAACAGTCACAGCATAGCTGTACTCTGTTGGCAGGTTATGGTTTaGGCCCATTATAGTAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: NIVLKLAFQNSHSIAVLCWQVMV*AHYSKC Trigger: ACATTTACTATAATGGGCCAAAACCATAACCTGCCA...ACAGAGTACAGCTATGCTGTGACTGTTTTGGAAAGCCAGTTTTAACACTATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATCATTCAGTTGATGTCTaGTACTTAGGTGTCATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHHSVDV*YLGVMP Trigger: TGGCATGACACCTAAGTACAAGACATCAACTGAATG...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS TCA 90 bp | GTGGCAATGATTCTGCTTCCAGCAAGTTGCCAAACATGTAATTCATaGACTTCCTCAACTCCTTCAACATTTCGAAGTTCTTTTATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VAMILLPASCQTCNS*TSSTPSTFRSSFIK Trigger: TTTGATAAAAGAACTTCGAAATGTTGAAGGAGTTGAGGAAGTTCATGAATTACATGTTTGGCAACTTGCTGGAAGCAGAATCATTGCCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATATTTCTACAAATGCTTaGCAGGGGTCAGGGAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: IITEYTDTLHCAVSRQNHISTNA*QGSGKH Trigger: ATGTTTCCCTGACCCCTGCAAAGCATTTGTAGAAAT...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATCACAAACATTGCTGGTaGTGCTCAAAAAGCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: IITEYTDTLHCAVSRQNHHKHCW*CSKSSI Trigger: AATGGAGCTTTTTGAGCACAACCAGCAATGTTTGTG...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | CAGGTTATGGTTTTGGCCCATTATAGTAAATGTGAACTTACAAACTGTGTTCCTAAAGATCAAGATGTATaGCAAACTGGCAGGTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: QVMVLAHYSKCELTNCVPKDQDV*QTGRLW Trigger: CCATAACCTGCCAGTTTGCAATACATCTTGATCTTT...AGGAACACAGTTTGTAAGTTCACATTTACTATAATGGGCCAAAACCATAACCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | TCACTAAGGCTGCATTTGGCTTGGAAAAATTTCTTGGTTTTAATTCAGGCACATTCACTAAGGCTGCATTaGGCTTGGAAAAATTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLRLHLAWKNFLVLIQAHSLRLH*AWKNFL Trigger: CAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA...ATGTGCCTGAATTAAAACCAAGAAATTTTTCCAAGCCAAATGCAGCCTTAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS-3UTR CAA 90 bp | ATAATCACAGAATATACTGATACACTTCATTGTGCTGTTTCAAGGCAGAACCATGAGGTAGGAACAGCTTaGGAAAATAACACACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: IITEYTDTLHCAVSRQNHEVGTA*ENNTQS Trigger: TGACTGTGTGTTATTTTCCAAAGCTGTTCCTACCTC...ATGGTTCTGCCTTGAAACAGCACAATGAAGTGTATCAGTATATTCTGTGATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CCA 72 bp | GCTCGGATCCAGCCGAACGTGTTCTTCTGGGTGGCGTaGGTCCGCCGGGCGAAGCGCTCGGCCACCAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: ARIQPNVFFWVA*VRRAKRSATSA Trigger: GGCGCTGGTGGCCGAGCGCTTCGCCCGGCGGACCCACGCCACCCAGAAGAACACGTTCGGCTGGATCCGAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CAA 90 bp | GTGTTGGTCTCCTCCTGGTCGGGACCCTGCTCGCCCGGGGCCACGTaGATGTCGCTGCTCCCGGGGCGGGTGCTCTTAACGCGAGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: VLVSSWSGPCSPGAT*MSLLPGRVLLTRGP Trigger: GGGGCCTCGCGTTAAGAGCACCCGCCCCGGGAGCAGCGACATCAACGTGGCCCCGGGCGAGCAGGGTCCCGACCAGGAGGAGACCAACAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS GCA 72 bp | CCGGCCACGCCGACCCCAAGGACCACCAGCGGCTGCTaGATCTCGTGCGGCTCGATGAAGCGCTCGATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PATPTPRTTSGC*ISCGSMKRSMA Trigger: GGCCATCGAGCGCTTCATCGAGCCGCACGAGATGCAGCAGCCGCTGGTGGTCCTTGGGGTCGGCGTGGCCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CCA 72 bp | CCTCGGCTCGGATCCAGCCGAACGTGTTCTTCTGGGTaGCGTGGGTCCGCCGGGCGAAGCGCTCGGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: PRLGSSRTCSSG*RGSAGRSARPP Trigger: TGGTGGCCGAGCGCTTCGCCCGGCGGACCCACGCCACCCAGAAGAACACGTTCGGCTGGATCCGAGCCGAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CAA 72 bp | TCCTCCTGGTCGGGACCCTGCTCGCCCGGGGCCACGTaGATGTCGCTGCTCCCGGGGCGGGTGCTCTTAACG | + |
|
Preference number: 6 (lower is better) Translates to: SSWSGPCSPGAT*MSLLPGRVLLT Trigger: CGTTAAGAGCACCCGCCCCGGGAGCAGCGACATCAACGTGGCCCCGGGCGAGCAGGGTCCCGACCAGGAGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS GCA 72 bp | AGCCCGGCCACGCCGACCCCAAGGACCACCAGCGGCTaGTGCATCTCGTGCGGCTCGATGAAGCGCTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: SPATPTPRTTSG*CISCGSMKRSM Trigger: CATCGAGCGCTTCATCGAGCCGCACGAGATGCAGCAGCCGCTGGTGGTCCTTGGGGTCGGCGTGGCCGGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS TCA 72 bp | CGCTGTGATGGTGGAAGAGGCAGAGCCCCAGCACGTTaGCCAGCAGCCCGGCCACGCCGACCCCAAGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: RCDGGRGRAPAR*PAARPRRPQGP Trigger: TGGTCCTTGGGGTCGGCGTGGCCGGGCTGCTGGTCAACGTGCTGGGGCTCTGCCTCTTCCACCATCACAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS GCA 72 bp | CCGACCCCAAGGACCACCAGCGGCTGCTGCATCTCGTaGGGCTCGATGAAGCGCTCGATGGCCTCCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PTPRTTSGCCIS*GSMKRSMASSR Trigger: CCTGCTGGAGGCCATCGAGCGCTTCATCGAGCCGCACGAGATGCAGCAGCCGCTGGTGGTCCTTGGGGTCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CCA 72 bp | ATTACCTCGGCTCGGATCCAGCCGAACGTGTTCTTCTaGGTGGCGTGGGTCCGCCGGGCGAAGCGCTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ITSARIQPNVFF*VAWVRRAKRSA Trigger: GGCCGAGCGCTTCGCCCGGCGGACCCACGCCACCCAGAAGAACACGTTCGGCTGGATCCGAGCCGAGGTAAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CCA 72 bp | GCCCGTTGGAGTTGCTGGTATTGGCCACCAGGGTGTTaGTCTCCTCCTGGTCGGGACCCTGCTCGCCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ARWSCWYWPPGC*SPPGRDPARPG Trigger: CCCCGGGCGAGCAGGGTCCCGACCAGGAGGAGACCAACACCCTGGTGGCCAATACCAGCAACTCCAACGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CAA 72 bp | AGCCCGTTGGAGTTGCTGGTATTGGCCACCAGGGTGTaGGTCTCCTCCTGGTCGGGACCCTGCTCGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPLELLVLATRV*VSSWSGPCSPG Trigger: CCCGGGCGAGCAGGGTCCCGACCAGGAGGAGACCAACACCCTGGTGGCCAATACCAGCAACTCCAACGGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CCA 72 bp | CTGAGGGCTCTGCTTGCTGGTCTCCTCTGCGGCGGCTaGACTGAGGAGCGGATGGCTGAGGAGCTAGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LRALLAGLLCGG*TEERMAEELER Trigger: CCTCTCTAGCTCCTCAGCCATCCGCTCCTCAGTCCAGCCGCCGCAGAGGAGACCAGCAAGCAGAGCCCTCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CCA 72 bp | TTGCTGGTATTGGCCACCAGGGTGTTGGTCTCCTCCTaGTCGGGACCCTGCTCGCCCGGGGCCACGTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LLVLATRVLVSS*SGPCSPGATLM Trigger: CATCAACGTGGCCCCGGGCGAGCAGGGTCCCGACCAGGAGGAGACCAACACCCTGGTGGCCAATACCAGCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CAA 90 bp | TCCAATTTCAGCCCGTTGGAGTTGCTGGTATTGGCCACCAGGGTGTaGGTCTCCTCCTGGTCGGGACCCTGCTCGCCCGGGGCCACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SNFSPLELLVLATRV*VSSWSGPCSPGATL Trigger: CAACGTGGCCCCGGGCGAGCAGGGTCCCGACCAGGAGGAGACCAACACCCTGGTGGCCAATACCAGCAACTCCAACGGGCTGAAATTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CAA 90 bp | TCTGGGTCTGCGGGGTCCAATTTCAGCCCGTTGGAGTTGCTGGTATaGGCCACCAGGGTGTTGGTCTCCTCCTGGTCGGGACCCTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SGSAGSNFSPLELLV*ATRVLVSSWSGPCS Trigger: CGAGCAGGGTCCCGACCAGGAGGAGACCAACACCCTGGTGGCCAATACCAGCAACTCCAACGGGCTGAAATTGGACCCCGCAGACCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CCA 72 bp | CGGGGTCCAATTTCAGCCCGTTGGAGTTGCTGGTATTaGCCACCAGGGTGTTGGTCTCCTCCTGGTCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RGPISARWSCWY*PPGCWSPPGRD Trigger: GTCCCGACCAGGAGGAGACCAACACCCTGGTGGCCAATACCAGCAACTCCAACGGGCTGAAATTGGACCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CAA 72 bp | GCGGGGTCCAATTTCAGCCCGTTGGAGTTGCTGGTATaGGCCACCAGGGTGTTGGTCTCCTCCTGGTCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AGSNFSPLELLV*ATRVLVSSWSG Trigger: TCCCGACCAGGAGGAGACCAACACCCTGGTGGCCAATACCAGCAACTCCAACGGGCTGAAATTGGACCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS GCA 72 bp | CTGGGTCTGCGGGGTCCAATTTCAGCCCGTTGGAGTTaGTGGTATTGGCCACCAGGGTGTTGGTCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LGLRGPISARWS*WYWPPGCWSPP Trigger: AGGAGGAGACCAACACCCTGGTGGCCAATACCAGCAACTCCAACGGGCTGAAATTGGACCCCGCAGACCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CCA 72 bp | GGTCTGCGGGGTCCAATTTCAGCCCGTTGGAGTTGCTaGTATTGGCCACCAGGGTGTTGGTCTCCTCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GLRGPISARWSC*YWPPGCWSPPG Trigger: ACCAGGAGGAGACCAACACCCTGGTGGCCAATACCAGCAACTCCAACGGGCTGAAATTGGACCCCGCAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CAA 72 bp | TCTGGGTCTGCGGGGTCCAATTTCAGCCCGTTGGAGTaGCTGGTATTGGCCACCAGGGTGTTGGTCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SGSAGSNFSPLE*LVLATRVLVSS Trigger: GGAGGAGACCAACACCCTGGTGGCCAATACCAGCAACTCCAACGGGCTGAAATTGGACCCCGCAGACCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CAA 72 bp | GGGTTTTCTGGGTCTGCGGGGTCCAATTTCAGCCCGTaGGAGTTGCTGGTATTGGCCACCAGGGTGTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GFSGSAGSNFSP*ELLVLATRVLV Trigger: GACCAACACCCTGGTGGCCAATACCAGCAACTCCAACGGGCTGAAATTGGACCCCGCAGACCCAGAAAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CCA 72 bp | GGTTTTCTGGGTCTGCGGGGTCCAATTTCAGCCCGTTaGAGTTGCTGGTATTGGCCACCAGGGTGTTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GFLGLRGPISAR*SCWYWPPGCWS Trigger: AGACCAACACCCTGGTGGCCAATACCAGCAACTCCAACGGGCTGAAATTGGACCCCGCAGACCCAGAAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CCA 72 bp | TTCCATTCACTTGTACTTCCACTGTATCACCACTTCTaGGGTTTTCTGGGTCTGCGGGGTCCAATTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: FHSLVLPLYHHF*GFLGLRGPISA Trigger: GGCTGAAATTGGACCCCGCAGACCCAGAAAACCCCAGAAGTGGTGATACAGTGGAAGTACAAGTGAATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CCA 72 bp | TGTGGTAGTGTCCCACAACATTGCTTCAAAGCACACTaGGTTCTGCAGGCAAGTTCACACGGAACTACACTT | + |
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Preference number: 6 (lower is better) Translates to: CGSVPQHCFKAH*VLQASSHGTTL Trigger: AAGTGTAGTTCCGTGTGAACTTGCCTGCAGAACCCAGTGTGCTTTGAAGCAATGTTGTGGGACACTACCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CAA 90 bp | CAAGGCATCTCCAAGGACATGCAGAAAAACTCCACGCATGTTAAGTaGTCCAGCCCTATCTTCTTCCAGTTCCATATGGTCAGGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: QGISKDMQKNSTHVK*SSPIFFQFHMVRFS Trigger: AGAGAACCTGACCATATGGAACTGGAAGAAGATAGGGCTGGACAACTTAACATGCGTGGAGTTTTTCTGCATGTCCTTGGAGATGCCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS GCA 72 bp | ACTACAATCACTGAACCCAAGGCATCTCCAAGGACATaGAGAAAAACTCCACGCATGTTAAGTTGTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: TTITEPKASPRT*RKTPRMLSCPA Trigger: GGCTGGACAACTTAACATGCGTGGAGTTTTTCTGCATGTCCTTGGAGATGCCTTGGGTTCAGTGATTGTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS TCA 72 bp | CTGGGTTCTGCAGGCAAGTTCACACGGAACTACACTTaGTTTAGAGCCTACACTAGCAAATTCAGGCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: LGSAGKFTRNYT*FRAYTSKFRLN Trigger: ATTCAGCCTGAATTTGCTAGTGTAGGCTCTAAATCAAGTGTAGTTCCGTGTGAACTTGCCTGCAGAACCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CAA 72 bp | TCCAAGGACATGCAGAAAAACTCCACGCATGTTAAGTaGTCCAGCCCTATCTTCTTCCAGTTCCATATGGTC | + |
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Preference number: 6 (lower is better) Translates to: SKDMQKNSTHVK*SSPIFFQFHMV Trigger: GACCATATGGAACTGGAAGAAGATAGGGCTGGACAACTTAACATGCGTGGAGTTTTTCTGCATGTCCTTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CAA 90 bp | GCAGGGATGTTTTCAGCTTTAGTCCTCCTGGGCTTCTTCTCTAGATaGTTACTAAGTTCTAAACAAGAAATGCTAACTGCTGGGGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: AGMFSALVLLGFFSR*LLSSKQEMLTAGVF Trigger: AAAGACCCCAGCAGTTAGCATTTCTTGTTTAGAACTTAGTAACAATCTAGAGAAGAAGCCCAGGAGGACTAAAGCTGAAAACATCCCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CAA 90 bp | GATAGGTTGTGTAAAGAAGTATACAAACCATTACAACACAAAGAGTaGGATCTAAATATAGCACCCAGCAAGGACCAGCCTCATAAACTG | + |
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Preference number: 6 (lower is better) Translates to: DRLCKEVYKPLQHKE*DLNIAPSKDQPHKL Trigger: CAGTTTATGAGGCTGGTCCTTGCTGGGTGCTATATTTAGATCCAACTCTTTGTGTTGTAATGGTTTGTATACTTCTTTACACAACCTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS TCA 72 bp | ATTCTGCTTCCAGCAAGTTGCCAAACATGTAATTCATaGACTTCCTCAACTCCTTCAACATTTCGAAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: ILLPASCQTCNS*TSSTPSTFRSS Trigger: AGAACTTCGAAATGTTGAAGGAGTTGAGGAAGTTCATGAATTACATGTTTGGCAACTTGCTGGAAGCAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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| CDS CAA 72 bp | TTTTCAGCTTTAGTCCTCCTGGGCTTCTTCTCTAGATaGTTACTAAGTTCTAAACAAGAAATGCTAACTGCT | + |
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Preference number: 6 (lower is better) Translates to: FSALVLLGFFSR*LLSSKQEMLTA Trigger: AGCAGTTAGCATTTCTTGTTTAGAACTTAGTAACAATCTAGAGAAGAAGCCCAGGAGGACTAAAGCTGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367001.5 |
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