RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC2A4 (Homo sapiens)

Ensembl gene IDs: ENSG00000181856

Ensembl transcript IDs: ENST00000317370.13, ENST00000424875.2, ENST00000570783.5, ENST00000571308.5, ENST00000572485.5, ENST00000671706.1, ENST00000672821.1, ENST00000672921.1, ENST00000673224.1, ENST00000673275.1

Found 903 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCATCAGGATGGCACAGCCACACATGCCCGCCAGGCCCAGGAGATaGAGCGTCCGGCGCCCCGCCCGCTCCACCAACAACACCGAGACC +
Preference number: 1 (lower is better)
Translates to: VIRMAQPHMPARPRR*SVRRPARSTNNTET
Trigger: GGTCTCGGTGTTGTTGGTGGAGCGGGCGGGGCGCCGGACGCTCCATCTCCTGGGCCTGGCGGGCATGTGTGGCTGTGCCATCCTGATGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR GCA 90 bp CCCTGGAAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTaGAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCA +
Preference number: 1 (lower is better)
Translates to: PWKAEPAVREVSPFP*RGQERTPFARRGGS
Trigger: TGAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTTCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR TCA 90 bp CAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTaGAGAGTGCCCCTATCATGGGTTTCACTGCCCATCTGTGACATG +
Preference number: 1 (lower is better)
Translates to: QGLASLLPCLQLCPW*RVPLSWVSLPICDM
Trigger: CATGTCACAGATGGGCAGTGAAACCCATGATAGGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR GCA 90 bp TTGGGAAACCATCGGGGTAGAGCCCCAAGCCTAGAGGCGGGAGCCTaGCGTCCTTCCATCTTGCCACACATGGGCACATACTTTCCTGTT +
Preference number: 1 (lower is better)
Translates to: LGNHRGRAPSLEAGA*RPSILPHMGTYFPV
Trigger: AACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAGGCTTGGGGCTCTACCCCGATGGTTTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR GCA 90 bp TGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTaGCCCTATCATGGGTTTCACTGCCCATCTGTGACATGGGCTGAC +
Preference number: 1 (lower is better)
Translates to: WHPCCHVSSCVPGEE*PYHGFHCPSVTWAD
Trigger: GTCAGCCCATGTCACAGATGGGCAGTGAAACCCATGATAGGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR CCA 90 bp TCTGTGCTGGGTTTCACCTCCTGCTCTAAAAGAGAGGGTGTCCGGTaGAAGGCAGCTGAGATCTGGTCAAACGTCCGGCCTCGAGTTTCA +
Preference number: 1 (lower is better)
Translates to: SVLGFTSCSKREGVR*KAAEIWSNVRPRVS
Trigger: TGAAACTCGAGGCCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAGCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR CCA 90 bp CAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTaGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGG +
Preference number: 1 (lower is better)
Translates to: QSRSAPFLALILWSR*STKLTQRPMVCGWR
Trigger: CCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
3UTR GCA 90 bp GGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGTTAAAGTaGTGCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGC +
Preference number: 1 (lower is better)
Translates to: GILFHPEIIGKRGLK*CRGKEGVSGPGRES
Trigger: GCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGCAGCACTTTAACCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
3UTR GCA 90 bp TGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTaGTGGGTTTCACCTCCTGCTCTAAAAGAGAGGGTGTCCGGTGGA +
Preference number: 1 (lower is better)
Translates to: WPLSRSHLALNTQVL*WVSPPALKERVSGG
Trigger: TCCACCGGACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR CCA 90 bp TCCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTaGTCAAACGTCCGGCCTCGAGTTTCAGGTACTCTTAAGAAGGTG +
Preference number: 1 (lower is better)
Translates to: SCSKREGVRWKAAEI*SNVRPRVSGTLKKV
Trigger: CACCTTCTTAAGAGTACCTGAAACTCGAGGCCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR TCA 90 bp AGAGTGCCCCTATCATGGGTTTCACTGCCCATCTGTGACATGGGCTaGCACCTCCCTCACAGAGTGAGTATTCTGCAAATGCCAAGAGCA +
Preference number: 1 (lower is better)
Translates to: RVPLSWVSLPICDMG*HLPHRVSILQMPRA
Trigger: TGCTCTTGGCATTTGCAGAATACTCACTCTGTGAGGGAGGTGTCAGCCCATGTCACAGATGGGCAGTGAAACCCATGATAGGGGCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR TCA 90 bp TCCCTGGTGAAGAGTGCCCCTATCATGGGTTTCACTGCCCATCTGTaGCATGGGCTGACACCTCCCTCACAGAGTGAGTATTCTGCAAAT +
Preference number: 1 (lower is better)
Translates to: SLVKSAPIMGFTAHL*HGLTPPSQSEYSAN
Trigger: ATTTGCAGAATACTCACTCTGTGAGGGAGGTGTCAGCCCATGTCACAGATGGGCAGTGAAACCCATGATAGGGGCACTCTTCACCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR CCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTaGGAGGAGTCCAAGGTGGTGGGAAACTGGATTTCTTGTCTCCTG +
Preference number: 1 (lower is better)
Translates to: CPESAWQEFSESPRL*EESKVVGNWISCLL
Trigger: CAGGAGACAAGAAATCCAGTTTCCCACCACCTTGGACTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR CCA 90 bp GTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTaGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGT +
Preference number: 1 (lower is better)
Translates to: VTIQSRSAPFLALIL*SRWSTKLTQRPMVC
Trigger: ACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
3UTR-3UTR CCA 90 bp CGGGGTAGAGCCCCAAGCCTAGAGGCGGGAGCCTGCCGTCCTTCCATCTTGCCAAGAGGGAGGGGAGAGTaGCCCACCCTGATGGCCACG +
Preference number: 2 (lower is better)
Translates to: RGRAPSLEAGACRPSILPRGRGE*PTLMAT
Trigger: CGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCT...TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAGGCTTGGGGCTCTACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAATCAGGGGCTGCCGGTaGGTACGGCTGCCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTIRGCR*VRLPRS
Trigger: GCTCCTGGGCAGCCGTACCCACCGGCAGCCCCTGAT...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR TCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAGAGAGTGGCCCACCCTaGTGGCCACGGCCAAACCAC +
Preference number: 2 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTESGPP*WPRPNH
Trigger: GTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTC...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
3UTR-3UTR GCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACATGGCTCTCCCACCCCTaGCTGGCCCCTCAGTCGTTC +
Preference number: 2 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTWLSHP*LAPQSF
Trigger: GAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCCA...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR CCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACACCGGGTAGAGAGAGCTaGCTCTCCCACCCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTPGRES*LSHPCL
Trigger: CAGGCAGGGGTGGGAGAGCCAGCTCTCTCTACCCGG...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
3UTR-3UTR CCA 90 bp AAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGGCCGGGCGGGGTCCCTaGCTGAAGAGCTCGGCCACG +
Preference number: 2 (lower is better)
Translates to: KAEPAVREVSPFPCRGQEAGRGP*LKSSAT
Trigger: CGTGGCCGAGCTCTTCAGCCAGGGACCCCGCCCGGC...CTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
3UTR-3UTR TCA 90 bp CCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCAGAGAGTGGCCCACCCTaGTGGCCACGGCCAAACCAC +
Preference number: 2 (lower is better)
Translates to: PFPCRGQERTPFARRGGSESGPP*WPRPNH
Trigger: GTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTC...TGAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR TCA 90 bp AGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACAGAGAGTGGCCCACCCTaGTGGCCACGGCCAAACCAC +
Preference number: 2 (lower is better)
Translates to: RKREGRVAHPDGHGQTTTESGPP*WPRPNH
Trigger: GTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTC...TGTTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
3UTR-3UTR TCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACACTTGCCCTGGAAGGCTaGGCCTGCAGTGAGGGAGGT +
Preference number: 2 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTLALEG*ACSEGG
Trigger: ACCTCCCTCACTGCAGGCTCAGCCTTCCAGGGCAAG...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR GCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAAGGGGAATGAGGGGGTaGTCAGACCACCCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTRGMRG*SDHPSP
Trigger: GGGGGAAGGGTGGTCTGAGCACCCCCTCATTCCCCT...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
3UTR-3UTR CCA 90 bp GACCACACCAGCTCCTATGGTGGCATAGGCAGGCTGGCCTACCCCTGCTGTCTCCCGGGTAGAGAGAGCTaGCTCTCCCACCCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: DHTSSYGGIGRLAYPCCLPGRES*LSHPCL
Trigger: CAGGCAGGGGTGGGAGAGCCAGCTCTCTCTACCCGG...GAGACAGCAGGGGTAGGCCAGCCTGCCTATGCCACCATAGGAGCTGGTGTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp CGGGGTAGAGCCCCAAGCCTAGAGGCGGGAGCCTGCCGTCCTTCCATCTTGCCACACTGCACTCGAGCCTaGGCGACAGAGCGAGACTGT +
Preference number: 2 (lower is better)
Translates to: RGRAPSLEAGACRPSILPHCTRA*ATERDC
Trigger: ACAGTCTCGCTCTGTCGCCCAGGCTCGAGTGCAGTG...TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAGGCTTGGGGCTCTACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR TCA 90 bp GTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCAGGGAGGAAGAGGGGTaGAGAGTTATGGTCCCTGTC +
Preference number: 2 (lower is better)
Translates to: VGPWAGPGILAAMSPAVSREEEG*RVMVPV
Trigger: GACAGGGACCATAACTCTTCACCCCTCTTCCTCCCT...GGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR TCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACACCGGTGGAAGGCAGCTaGGATCTGGTCAAACGTCCG +
Preference number: 2 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTPVEGS*DLVKRP
Trigger: CGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGG...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR CCA 90 bp TCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGTCCGGGCCGGGCGGGGTCCCTaGCTGAAGAGCTCGGCCACG +
Preference number: 2 (lower is better)
Translates to: SKREGVRWKAAEIWSNVRAGRGP*LKSSAT
Trigger: CGTGGCCGAGCTCTTCAGCCAGGGACCCCGCCCGGC...CCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR CCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACATCTCCCACCCCTGCCTaGCCCCTCAGTCGTTCTCAT +
Preference number: 2 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTSPTPA*PLSRSH
Trigger: ATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGA...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR TCA 90 bp GTTAGGGCTCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCCTTGCCCTGGAAGGCTaGGCCTGCAGTGAGGGAGGT +
Preference number: 2 (lower is better)
Translates to: VRAPSWQPWETIGVEPQALALEG*ACSEGG
Trigger: ACCTCCCTCACTGCAGGCTCAGCCTTCCAGGGCAAG...GGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR GCA 90 bp CTCCACCAACAACACCGAGACCAAGGTGAAGACTGTGTTGACCACACCAGCTCCGCCGGTGGGTACGGCTaGCCAGGAGCTGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: LHQQHRDQGEDCVDHTSSAGGYG*PGAGAG
Trigger: CCCTGCTCCAGCTCCTGGGCAGCCGTACCCACCGGC...GGAGCTGGTGTGGTCAACACAGTCTTCACCTTGGTCTCGGTGTTGTTGGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp TGTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTTCTTGGCAGCCTTaGGAAACCATCGGGGTAGAG +
Preference number: 2 (lower is better)
Translates to: CGAVGRAWHPCCHVSSCVPSWQP*ETIGVE
Trigger: CTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGG...GACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR CCA 90 bp GTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCAGGGGTGAAGAGTTATaGTCCCTGTCTCAGCCCATC +
Preference number: 2 (lower is better)
Translates to: VGPWAGPGILAAMSPAVSRGEEL*SLSQPI
Trigger: GATGGGCTGAGACAGGGACCATAACTCTTCACCCCT...GGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR CCA 90 bp GGCTCTCCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCTGGAGCAGGGACAGTaGCCGCTCACGCTCCAGCTT +
Preference number: 2 (lower is better)
Translates to: GSPTPAWPLSRSHLALNTLEQGQ*PLTLQL
Trigger: AAGCTGGAGCGTGAGCGGCCACTGTCCCTGCTCCAG...AGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACACCACAGTCATCAGGATaGCACAGCCACACATGCCCG +
Preference number: 2 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTPQSSG*HSHTCP
Trigger: CGGGCATGTGTGGCTGTGCCATCCTGATGACTGTGG...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR TCA 90 bp AGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCGGCAGGAGAATGGCGTaGACCTGGGAGACAGCTTGC +
Preference number: 2 (lower is better)
Translates to: RAWHPCCHVSSCVPGEECGRRMA*TWETAC
Trigger: GCAAGCTGTCTCCCAGGTTCACGCCATTCTCCTGCC...GCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR TCA 90 bp AGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCTCTGAGGCCTTGAGCTaGGGCAGGACAGAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: RAWHPCCHVSSCVPGEECSEALS*GRTEGG
Trigger: TCCTCCCTCTGTCCTGCCTCAGCTCAAGGCCTCAGA...GCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR TCA 90 bp CCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGGCAGCACGACCGCAATaGTCAGGGGCTGCCGGTGGG +
Preference number: 2 (lower is better)
Translates to: PALKERVSGGRQLRSGQTAARPQ*SGAAGG
Trigger: CCCACCGGCAGCCCCTGATCATTGCGGTCGTGCTGC...CGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR TCA 90 bp CTCCACCAACAACACCGAGACCAAGGTGAAGACTGTGTTGACCACACCAGCTCCGCAGCACGACCGCAATaGTCAGGGGCTGCCGGTGGG +
Preference number: 2 (lower is better)
Translates to: LHQQHRDQGEDCVDHTSSAARPQ*SGAAGG
Trigger: CCCACCGGCAGCCCCTGATCATTGCGGTCGTGCTGC...GGAGCTGGTGTGGTCAACACAGTCTTCACCTTGGTCTCGGTGTTGTTGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR GCA 90 bp AAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAGGGGAATGAGGGGGTaGTCAGACCACCCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: KAEPAVREVSPFPCRGQERGMRG*SDHPSP
Trigger: GGGGGAAGGGTGGTCTGAGCACCCCCTCATTCCCCT...CTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACATGGAGACGTAGCTCATaGCTGGAACTCGCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTWRRSS*LELAPA
Trigger: TGCTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCA...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp GTTAGGGCTCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTCTCCCACCCCTGCCTaGCCCCTCAGTCGTTCTCAT +
Preference number: 2 (lower is better)
Translates to: VRAPSWQPWETIGVEPQASPTPA*PLSRSH
Trigger: ATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGA...GGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
3UTR-3UTR TCA 90 bp AAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGGGCAGGAGAATGGCGTaGACCTGGGAGACAGCTTGC +
Preference number: 2 (lower is better)
Translates to: KAEPAVREVSPFPCRGQEGRRMA*TWETAC
Trigger: GCAAGCTGTCTCCCAGGTTCACGCCATTCTCCTGCC...CTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR GCA 90 bp TGTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCAATTCTACCAGGCTaGAGGGATTCTTTTCCACCC +
Preference number: 2 (lower is better)
Translates to: CGAVGRAWHPCCHVSSCVPILPG*RDSFPP
Trigger: GGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGG...GACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR GCA 90 bp CCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTAGGGGAATGAGGGGGTaGTCAGACCACCCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: PTPAWPLSRSHLALNTQVRGMRG*SDHPSP
Trigger: GGGGGAAGGGTGGTCTGAGCACCCCCTCATTCCCCT...AACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR GCA 90 bp AGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCTAGAGGCGGGAGCCTaGCGTCCTTCCATCTTGCCA +
Preference number: 2 (lower is better)
Translates to: REVSPFPCRGQERTPFARLEAGA*RPSILP
Trigger: TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAG...CCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp GTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCAAGGTGGTGGGAAACTaGATTTCTTGTCTCCTGTCC +
Preference number: 2 (lower is better)
Translates to: VGPWAGPGILAAMSPAVSKVVGN*ISCLLS
Trigger: GGACAGGAGACAAGAAATCCAGTTTCCCACCACCTT...GGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR CCA 90 bp GTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCAGGAGTCCAAGGTGGTaGGAAACTGGATTTCTTGTC +
Preference number: 2 (lower is better)
Translates to: VGPWAGPGILAAMSPAVSRSPRW*ETGFLV
Trigger: GACAAGAAATCCAGTTTCCCACCACCTTGGACTCCT...GGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR CCA 90 bp GGCCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCATCAGGGGCTGCCGGTaGGTACGGCTGCCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: GPIASATYWKPMPMMKLLIRGCR*VRLPRS
Trigger: GCTCCTGGGCAGCCGTACCCACCGGCAGCCCCTGAT...GAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACACCACGAAGCCAAAGATaGCCACAATGGAGACGTAGC +
Preference number: 2 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTPRSQR*PQWRRS
Trigger: GCTACGTCTCCATTGTGGCCATCTTTGGCTTCGTGG...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp CAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCGCCGGGCGGGGTCCCTaGCTGAAGAGCTCGGCCACG +
Preference number: 2 (lower is better)
Translates to: QSFSSGPKYSSSVLGFTSAGRGP*LKSSAT
Trigger: CGTGGCCGAGCTCTTCAGCCAGGGACCCCGCCCGGC...GGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR CCA 90 bp GGCTCTCCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTAGAGAGGGTGTCCGGTaGAAGGCAGCTGAGATCTGG +
Preference number: 2 (lower is better)
Translates to: GSPTPAWPLSRSHLALNTREGVR*KAAEIW
Trigger: CCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCT...AGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR TCA 90 bp CCCCTTTGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGAGTGGCCCACCCTaGTGGCCACGGCCAAACCAC +
Preference number: 2 (lower is better)
Translates to: PLCPESAWQEFSESPRLWESGPP*WPRPNH
Trigger: GTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTC...CCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCAAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR GCA 90 bp CGGGGTAGAGCCCCAAGCCTAGAGGCGGGAGCCTGCCGTCCTTCCATCTTGCCAAAGAGAGGGTTAAAGTaGTGCAGAGGAAAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: RGRAPSLEAGACRPSILPKRGLK*CRGKEG
Trigger: CCCTTCCTTTCCTCTGCAGCACTTTAACCCTCTCTT...TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAGGCTTGGGGCTCTACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR GCA 90 bp CCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGAGGGGAATGAGGGGGTaGTCAGACCACCCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: PALKERVSGGRQLRSGQTRGMRG*SDHPSP
Trigger: GGGGGAAGGGTGGTCTGAGCACCCCCTCATTCCCCT...CGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR GCA 90 bp CCCTGGAAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTACCTGGGAGACAGCTTaGAGTGAAGCAAGATCACGC +
Preference number: 2 (lower is better)
Translates to: PWKAEPAVREVSPFPCRGTWETA*SEARSR
Trigger: GCGTGATCTTGCTTCACTGCAAGCTGTCTCCCAGGT...ACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR GCA 90 bp GTTAGGGCTCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTTTCCTGTTCCCTCTTaGCCTGGAAGGCTGAGCCTG +
Preference number: 2 (lower is better)
Translates to: VRAPSWQPWETIGVEPQAFPVPS*PGRLSL
Trigger: CAGGCTCAGCCTTCCAGGGCAAGAGGGAACAGGAAA...GGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR GCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGGCCGGTGGGTACGGCTaGCCAGGAGCTGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGAGGYG*PGAGAG
Trigger: CCCTGCTCCAGCTCCTGGGCAGCCGTACCCACCGGC...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR GCA 90 bp GTCCTTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGTGGCTCTCCCACCCCTaGCTGGCCCCTCAGTCGTTC +
Preference number: 2 (lower is better)
Translates to: VLPSCHTWAHTFLFPLALWLSHP*LAPQSF
Trigger: GAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCCA...CAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
3UTR-3UTR CCA 90 bp CCCCTTTGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGCCGGGTAGAGAGAGCTaGCTCTCCCACCCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: PLCPESAWQEFSESPRLWPGRES*LSHPCL
Trigger: CAGGCAGGGGTGGGAGAGCCAGCTCTCTCTACCCGG...CCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCAAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGAGAGGGAGGGGAGAGTaGCCCACCCTGATGGCCACG +
Preference number: 2 (lower is better)
Translates to: CPESAWQEFSESPRLWEERGRGE*PTLMAT
Trigger: CGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCT...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp CGGGGTAGAGCCCCAAGCCTAGAGGCGGGAGCCTGCCGTCCTTCCATCTTGCCAAAGGTGGTGGGAAACTaGATTTCTTGTCTCCTGTCC +
Preference number: 2 (lower is better)
Translates to: RGRAPSLEAGACRPSILPKVVGN*ISCLLS
Trigger: GGACAGGAGACAAGAAATCCAGTTTCCCACCACCTT...TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAGGCTTGGGGCTCTACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp CCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCAGAAAGTCCCAGATTGTaGGAGGAGTCCAAGGTGGTG +
Preference number: 2 (lower is better)
Translates to: PFPCRGQERTPFARRGGSESPRL*EESKVV
Trigger: CACCACCTTGGACTCCTCCCACAATCTGGGACTTTC...TGAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp AGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACAGAAAGTCCCAGATTGTaGGAGGAGTCCAAGGTGGTG +
Preference number: 2 (lower is better)
Translates to: RKREGRVAHPDGHGQTTTESPRL*EESKVV
Trigger: CACCACCTTGGACTCCTCCCACAATCTGGGACTTTC...TGTTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp GTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCAGTACAACCGACCTTTaGTTTCTTCTCTCAATCCCC +
Preference number: 2 (lower is better)
Translates to: VGPWAGPGILAAMSPAVSSTTDL*FLLSIP
Trigger: GGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT...GGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR CCA 90 bp CCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGCTGGAGCAGGGACAGTaGCCGCTCACGCTCCAGCTT +
Preference number: 2 (lower is better)
Translates to: PALKERVSGGRQLRSGQTLEQGQ*PLTLQL
Trigger: AAGCTGGAGCGTGAGCGGCCACTGTCCCTGCTCCAG...CGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR TCA 90 bp GGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCTATCATCTGTGACATGGGCTaGCACCTCCCTCACAGAGTG +
Preference number: 2 (lower is better)
Translates to: GILAAMSPAVSLVKSAPIICDMG*HLPHRV
Trigger: CACTCTGTGAGGGAGGTGTCAGCCCATGTCACAGAT...GATAGGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR GCA 90 bp GTTAGGGCTCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCACCTGGGAGACAGCTTaGAGTGAAGCAAGATCACGC +
Preference number: 2 (lower is better)
Translates to: VRAPSWQPWETIGVEPQATWETA*SEARSR
Trigger: GCGTGATCTTGCTTCACTGCAAGCTGTCTCCCAGGT...GGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp GTTAGGGCTCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCGTTAGGGCTCCTTCTTaGCAGCCTTGGGAAACCATC +
Preference number: 2 (lower is better)
Translates to: VRAPSWQPWETIGVEPQAVRAPS*QPWETI
Trigger: GATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC...GGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp TGTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCAGTACAACCGACCTTTaGTTTCTTCTCTCAATCCCC +
Preference number: 2 (lower is better)
Translates to: CGAVGRAWHPCCHVSSCVSTTDL*FLLSIP
Trigger: GGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT...GACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR CCA 90 bp CCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCACCAGCTCCTATGGTaGCATAGGCAGGCTGGCCTA +
Preference number: 2 (lower is better)
Translates to: PTPAWPLSRSHLALNTQVHQLLW*HRQAGL
Trigger: TAGGCCAGCCTGCCTATGCCACCATAGGAGCTGGTG...AACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp GTGCTGGGTTTCACCTCCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTCACCAGCTCCTATGGTaGCATAGGCAGGCTGGCCTA +
Preference number: 2 (lower is better)
Translates to: VLGFTSCSKREGVRWKAAHQLLW*HRQAGL
Trigger: TAGGCCAGCCTGCCTATGCCACCATAGGAGCTGGTG...AGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp AAAGATGGCCACAATGGAGACGTAGCTCATGGCTGGAACTCGCTCCAGCAGGAGCCACACCAGCTCCTATaGTGGCATAGGCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: KDGHNGDVAHGWNSLQQEPHQLL*WHRQAG
Trigger: GCCAGCCTGCCTATGCCACCATAGGAGCTGGTGTGG...CTCCTGCTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCATTGTGGCCATCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp AGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACACAAAGATGGCCACAATaGAGACGTAGCTCATGGCTG +
Preference number: 2 (lower is better)
Translates to: RKREGRVAHPDGHGQTTTQRWPQ*RRSSWL
Trigger: CAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTG...TGTTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp GCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAACCAGCCACAGCCATaGCTGCCGGGCGGGGTCCCT +
Preference number: 2 (lower is better)
Translates to: ASQFYQAAGILFHPEIIGNQPQP*LPGGVP
Trigger: AGGGACCCCGCCCGGCAGCCATGGCTGTGGCTGGTT...CCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR CCA 90 bp CAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCAACCAGCCACAGCCATaGCTGCCGGGCGGGGTCCCT +
Preference number: 2 (lower is better)
Translates to: QSFSSGPKYSSSVLGFTSNQPQP*LPGGVP
Trigger: AGGGACCCCGCCCGGCAGCCATGGCTGTGGCTGGTT...GGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR CCA 90 bp CCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTAGAGAGGGTGTCCGGTaGAAGGCAGCTGAGATCTGG +
Preference number: 2 (lower is better)
Translates to: PTPAWPLSRSHLALNTQVREGVR*KAAEIW
Trigger: CCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCT...AACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR TCA 90 bp CCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCATCTGGTTTGTCCCACTaGGAAAGTCTAGACCTGTCT +
Preference number: 2 (lower is better)
Translates to: PFPCRGQERTPFARRGGSSGLSH*ESLDLS
Trigger: AGACAGGTCTAGACTTTCTCAGTGGGACAAACCAGA...TGAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR TCA 90 bp TCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCGTGGCAAGAATTCAGTaGAAGTCCCAGATTGTGGGA +
Preference number: 2 (lower is better)
Translates to: SFSLQGSRENSLRQARWLVARIQ*KSQIVG
Trigger: TCCCACAATCTGGGACTTTCACTGAATTCTTGCCAC...GAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR TCA 90 bp CCCCTTTGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGGCAGGAGAATGGCGTaGACCTGGGAGACAGCTTGC +
Preference number: 2 (lower is better)
Translates to: PLCPESAWQEFSESPRLWGRRMA*TWETAC
Trigger: GCAAGCTGTCTCCCAGGTTCACGCCATTCTCCTGCC...CCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCAAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR TCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGCCGGTGGAAGGCAGCTaGGATCTGGTCAAACGTCCG +
Preference number: 2 (lower is better)
Translates to: CPESAWQEFSESPRLWEEPVEGS*DLVKRP
Trigger: CGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGG...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
3UTR-3UTR GCA 90 bp GAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAAAAGAGAGGGTTAAAGTaGTGCAGAGGAAAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: EGRGRGEWPTLMATAKPQKRGLK*CRGKEG
Trigger: CCCTTCCTTTCCTCTGCAGCACTTTAACCCTCTCTT...TTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
3UTR-3UTR GCA 90 bp CATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGGCTGAGCCTGCAGTGTTTCCTGTTCCCTCTTaGCCTGGAAGGCTGAGCCTG +
Preference number: 2 (lower is better)
Translates to: HGHILSCSLLPWKAEPAVFPVPS*PGRLSL
Trigger: CAGGCTCAGCCTTCCAGGGCAAGAGGGAACAGGAAA...CACTGCAGGCTCAGCCTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR GCA 90 bp CAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCGCAATGATCAGGGGCTaGCGGTGGGTACGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: QSFSSGPKYSSSVLGFTSAMIRG*RWVRLP
Trigger: GGGCAGCCGTACCCACCGGCAGCCCCTGATCATTGC...GGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR GCA 90 bp CTCCACCAACAACACCGAGACCAAGGTGAAGACTGTGTTGACCACACCAGCTCCAGGCTGGCCTACCCCTaGTGTCTCGAAGATGCTGGT +
Preference number: 2 (lower is better)
Translates to: LHQQHRDQGEDCVDHTSSRLAYP*CLEDAG
Trigger: ACCAGCATCTTCGAGACAGCAGGGGTAGGCCAGCCT...GGAGCTGGTGTGGTCAACACAGTCTTCACCTTGGTCTCGGTGTTGTTGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGCCGGGTAGAGAGAGCTaGCTCTCCCACCCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGPGRES*LSHPCL
Trigger: CAGGCAGGGGTGGGAGAGCCAGCTCTCTCTACCCGG...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
3UTR-3UTR CCA 90 bp AGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTCCAGTTAGAGGGAGGGGAGAGTaGCCCACCCTGATGGCCACG +
Preference number: 2 (lower is better)
Translates to: SLRNILETHANDEVARPVRGRGE*PTLMAT
Trigger: CGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCT...AACTGGACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR CCA 90 bp GTTAGGGCTCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTCCTGCTCTCTGCTCTaGTTTGTCCCACTGAGAAAG +
Preference number: 2 (lower is better)
Translates to: VRAPSWQPWETIGVEPQASCSLL*FVPLRK
Trigger: CTTTCTCAGTGGGACAAACCAGAGCAGAGAGCAGGA...GGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp CCCTGGAAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTAAGGTGGTGGGAAACTaGATTTCTTGTCTCCTGTCC +
Preference number: 2 (lower is better)
Translates to: PWKAEPAVREVSPFPCRGKVVGN*ISCLLS
Trigger: GGACAGGAGACAAGAAATCCAGTTTCCCACCACCTT...ACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTTCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp AGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGGAAAGTCCCAGATTGTaGGAGGAGTCCAAGGTGGTG +
Preference number: 2 (lower is better)
Translates to: REVSPFPCRGQERTPFARESPRL*EESKVV
Trigger: CACCACCTTGGACTCCTCCCACAATCTGGGACTTTC...CCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp CCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTAAGGCAGCTGAGATCTaGTCAAACGTCCGGCCTCGA +
Preference number: 2 (lower is better)
Translates to: PTPAWPLSRSHLALNTQVKAAEI*SNVRPR
Trigger: TCGAGGCCGGACGTTTGACCAGATCTCAGCTGCCTT...AACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR GCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGAGGGGAATGAGGGGGTaGTCAGACCACCCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGRGMRG*SDHPSP
Trigger: GGGGGAAGGGTGGTCTGAGCACCCCCTCATTCCCCT...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
3UTR-3UTR GCA 90 bp CAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCAGGGGAATGAGGGGGTaGTCAGACCACCCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: QSFSSGPKYSSSVLGFTSRGMRG*SDHPSP
Trigger: GGGGGAAGGGTGGTCTGAGCACCCCCTCATTCCCCT...GGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR GCA 90 bp GGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCTATCGTGAGTCCTTTTCCCTaGAGGGGTCAAGAGAGAACT +
Preference number: 2 (lower is better)
Translates to: GILAAMSPAVSLVKSAPIVSPFP*RGQERT
Trigger: AGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCAC...GATAGGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR GCA 90 bp AGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGGTGAGTCCTTTTCCCTaGAGGGGTCAAGAGAGAACT +
Preference number: 2 (lower is better)
Translates to: REVSPFPCRGQERTPFARVSPFP*RGQERT
Trigger: AGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCAC...CCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp ATTCTGCAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCAGAGGGAGGGGAGAGTaGCCCACCCTGATGGCCACG +
Preference number: 2 (lower is better)
Translates to: ILQMPRAMPGTGSYNLLSRGRGE*PTLMAT
Trigger: CGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCT...GCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTGCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR CCA 90 bp GGCTCTCCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTAGGAGTCCAAGGTGGTaGGAAACTGGATTTCTTGTC +
Preference number: 2 (lower is better)
Translates to: GSPTPAWPLSRSHLALNTRSPRW*ETGFLV
Trigger: GACAAGAAATCCAGTTTCCCACCACCTTGGACTCCT...AGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
3UTR-3UTR CCA 90 bp TTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGCACTGCACTCGAGCCTaGGCGACAGAGCGAGACTGT +
Preference number: 2 (lower is better)
Translates to: FHLATHGHILSCSLLPWKHCTRA*ATERDC
Trigger: ACAGTCTCGCTCTGTCGCCCAGGCTCGAGTGCAGTG...CTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp GTTAGGGCTCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCCCATCTTGCCACACATaGGCACATACTTTCCTGTTC +
Preference number: 2 (lower is better)
Translates to: VRAPSWQPWETIGVEPQAPSCHT*AHTFLF
Trigger: GAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGG...GGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp CCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTAGTTGCTCGTCCAGTTaGAGAAACCAGCCACAGCCA +
Preference number: 2 (lower is better)
Translates to: PTPAWPLSRSHLALNTQVSCSSS*RNQPQP
Trigger: TGGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACT...AACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR GCA 90 bp AAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAAGAGAGGGTTAAAGTaGTGCAGAGGAAAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: KAEPAVREVSPFPCRGQEKRGLK*CRGKEG
Trigger: CCCTTCCTTTCCTCTGCAGCACTTTAACCCTCTCTT...CTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR GCA 90 bp GCTGAGATCTGGTCAAACGTCCGGCCTCGAGTTTCAGGTACTCTTAAGAAGGTGAGCTGCTGGCTCAGCTaGAGCACGACCGCAATGATC +
Preference number: 2 (lower is better)
Translates to: AEIWSNVRPRVSGTLKKVSCWLS*STTAMI
Trigger: GATCATTGCGGTCGTGCTGCAGCTGAGCCAGCAGCT...CACCTTCTTAAGAGTACCTGAAACTCGAGGCCGGACGTTTGACCAGATCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp TCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTAGAGGCGAGTACAACCGACCTTTaGTTTCTTCTCTCAATCCCC +
Preference number: 2 (lower is better)
Translates to: SFLAALGNHRGRAPSLEASTTDL*FLLSIP
Trigger: GGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT...CGCCTCTAGGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp TCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAAAAGACCCATGGTCTGTaGCTGGAGGAGTCCCTGACG +
Preference number: 2 (lower is better)
Translates to: SRSAPFLALILWSRWSTKKTHGL*LEESLT
Trigger: CGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTT...TTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
3UTR-3UTR CCA 90 bp GCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGCCACACCAGCTCCTATaGTGGCATAGGCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: ASQFYQAAGILFHPEIIGPHQLL*WHRQAG
Trigger: GCCAGCCTGCCTATGCCACCATAGGAGCTGGTGTGG...CCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp CCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTCCACAGTCATCAGGATaGCACAGCCACACATGCCCG +
Preference number: 2 (lower is better)
Translates to: PHSLRNILETHANDEVARPQSSG*HSHTCP
Trigger: CGGGCATGTGTGGCTGTGCCATCCTGATGACTGTGG...ACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp CCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGAGTTGCTCGTCCAGTTaGAGAAACCAGCCACAGCCA +
Preference number: 2 (lower is better)
Translates to: PALKERVSGGRQLRSGQTSCSSS*RNQPQP
Trigger: TGGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACT...CGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR GCA 90 bp CTCCACCAACAACACCGAGACCAAGGTGAAGACTGTGTTGACCACACCAGCTCCCCAATTCTACCAGGCTaGAGGGATTCTTTTCCACCC +
Preference number: 2 (lower is better)
Translates to: LHQQHRDQGEDCVDHTSSPILPG*RDSFPP
Trigger: GGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGG...GGAGCTGGTGTGGTCAACACAGTCTTCACCTTGGTCTCGGTGTTGTTGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR GCA 90 bp ATTCTGCAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCCTAGAGGCGGGAGCCTaGCGTCCTTCCATCTTGCCA +
Preference number: 2 (lower is better)
Translates to: ILQMPRAMPGTGSYNLLSLEAGA*RPSILP
Trigger: TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAG...GCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTGCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR GCA 90 bp CAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCAGCTGCTGGCTCAGCTaGAGCACGACCGCAATGATC +
Preference number: 2 (lower is better)
Translates to: QSFSSGPKYSSSVLGFTSSCWLS*STTAMI
Trigger: GATCATTGCGGTCGTGCTGCAGCTGAGCCAGCAGCT...GGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp CAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCGACGTAGCTCATGGCTaGAACTCGCTCCAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: QSFSSGPKYSSSVLGFTSDVAHG*NSLQQE
Trigger: CTCCTGCTGGAGCGAGTTCCAGCCATGAGCTACGTC...GGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp GCTGAGATCTGGTCAAACGTCCGGCCTCGAGTTTCAGGTACTCTTAAGAAGGTGTGGAGACGTAGCTCATaGCTGGAACTCGCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: AEIWSNVRPRVSGTLKKVWRRSS*LELAPA
Trigger: TGCTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCA...CACCTTCTTAAGAGTACCTGAAACTCGAGGCCGGACGTTTGACCAGATCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR GCA 90 bp AAAGATGGCCACAATGGAGACGTAGCTCATGGCTGGAACTCGCTCCAGCAGGAGAAGAGAGGGTTAAAGTaGTGCAGAGGAAAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: KDGHNGDVAHGWNSLQQEKRGLK*CRGKEG
Trigger: CCCTTCCTTTCCTCTGCAGCACTTTAACCCTCTCTT...CTCCTGCTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCATTGTGGCCATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp GGCCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCTCCTGCTCTCTGCTCTaGTTTGTCCCACTGAGAAAG +
Preference number: 2 (lower is better)
Translates to: GPIASATYWKPMPMMKLLSCSLL*FVPLRK
Trigger: CTTTCTCAGTGGGACAAACCAGAGCAGAGAGCAGGA...GAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
3UTR-3UTR CCA 90 bp GTCCTTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGTCCTGCTCTCTGCTCTaGTTTGTCCCACTGAGAAAG +
Preference number: 2 (lower is better)
Translates to: VLPSCHTWAHTFLFPLALSCSLL*FVPLRK
Trigger: CTTTCTCAGTGGGACAAACCAGAGCAGAGAGCAGGA...CAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp TGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTAAGACCCATGGTCTGTaGCTGGAGGAGTCCCTGACG +
Preference number: 2 (lower is better)
Translates to: CVSDTSVTIQSRSAPFLAKTHGL*LEESLT
Trigger: CGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTT...AGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
3UTR-3UTR CCA 90 bp GCTGAGATCTGGTCAAACGTCCGGCCTCGAGTTTCAGGTACTCTTAAGAAGGTGAGTTGCTCGTCCAGTTaGAGAAACCAGCCACAGCCA +
Preference number: 2 (lower is better)
Translates to: AEIWSNVRPRVSGTLKKVSCSSS*RNQPQP
Trigger: TGGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACT...CACCTTCTTAAGAGTACCTGAAACTCGAGGCCGGACGTTTGACCAGATCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR CAA 90 bp CTTTGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATaGTGGGAGGAGTCCAAGGTGGTGGGAAACTGGATTTCTTGTCTC +
Preference number: 2 (lower is better)
Translates to: LCPESAWQEFSESPR*WEESKVVGNWISCL
Trigger: GAGACAAGAAATCCAGTTTCCCACCACCTTGGACTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR CAA 90 bp GACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTaGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCC +
Preference number: 2 (lower is better)
Translates to: DTSVTIQSRSAPFLA*ILWSRWSTKLTQRP
Trigger: GGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
3UTR-3UTR TCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGGTGGCAAGAATTCAGTaGAAGTCCCAGATTGTGGGA +
Preference number: 2 (lower is better)
Translates to: CPESAWQEFSESPRLWEEVARIQ*KSQIVG
Trigger: TCCCACAATCTGGGACTTTCACTGAATTCTTGCCAC...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR GCA 90 bp GCTGAGATCTGGTCAAACGTCCGGCCTCGAGTTTCAGGTACTCTTAAGAAGGTGCCAATTCTACCAGGCTaGAGGGATTCTTTTCCACCC +
Preference number: 2 (lower is better)
Translates to: AEIWSNVRPRVSGTLKKVPILPG*RDSFPP
Trigger: GGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGG...CACCTTCTTAAGAGTACCTGAAACTCGAGGCCGGACGTTTGACCAGATCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR GCA 90 bp CCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTCCAATTCTACCAGGCTaGAGGGATTCTTTTCCACCC +
Preference number: 2 (lower is better)
Translates to: PHSLRNILETHANDEVARPILPG*RDSFPP
Trigger: GGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGG...ACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR CCA 90 bp GGCCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCAGGAGTCCAAGGTGGTaGGAAACTGGATTTCTTGTC +
Preference number: 2 (lower is better)
Translates to: GPIASATYWKPMPMMKLLRSPRW*ETGFLV
Trigger: GACAAGAAATCCAGTTTCCCACCACCTTGGACTCCT...GAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
3UTR-3UTR CCA 90 bp CACCTCCCTCACAGAGTGAGTATTCTGCAAATGCCAAGAGCAATGCCCGGCACTAGGAGTCCAAGGTGGTaGGAAACTGGATTTCTTGTC +
Preference number: 2 (lower is better)
Translates to: HLPHRVSILQMPRAMPGTRSPRW*ETGFLV
Trigger: GACAAGAAATCCAGTTTCCCACCACCTTGGACTCCT...AGTGCCGGGCATTGCTCTTGGCATTTGCAGAATACTCACTCTGTGAGGGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR CCA 90 bp GCTGAGATCTGGTCAAACGTCCGGCCTCGAGTTTCAGGTACTCTTAAGAAGGTGGGGAGGAGTCCAAGGTaGTGGGAAACTGGATTTCTT +
Preference number: 2 (lower is better)
Translates to: AEIWSNVRPRVSGTLKKVGRSPR*WETGFL
Trigger: AAGAAATCCAGTTTCCCACCACCTTGGACTCCTCCC...CACCTTCTTAAGAGTACCTGAAACTCGAGGCCGGACGTTTGACCAGATCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
3UTR-3UTR CCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGGAAAGTCCCAGATTGTaGGAGGAGTCCAAGGTGGTG +
Preference number: 2 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGESPRL*EESKVV
Trigger: CACCACCTTGGACTCCTCCCACAATCTGGGACTTTC...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR GCA 90 bp TTTCCAGGCAGCCTTTCAAATCCCCTCTTTGCCTTAGTTGGTCAAAAGCCTGTGACCTGGGAGACAGCTTaGAGTGAAGCAAGATCACGC +
Preference number: 2 (lower is better)
Translates to: FPGSLSNPLFALVGQKPVTWETA*SEARSR
Trigger: GCGTGATCTTGCTTCACTGCAAGCTGTCTCCCAGGT...CACAGGCTTTTGACCAACTAAGGCAAAGAGGGGATTTGAAAGGCTGCCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp ATTCTGCAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCGTTAGGGCTCCTTCTTaGCAGCCTTGGGAAACCATC +
Preference number: 2 (lower is better)
Translates to: ILQMPRAMPGTGSYNLLSVRAPS*QPWETI
Trigger: GATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC...GCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTGCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR CCA 90 bp AAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAAAGACCCATGGTCTGTaGCTGGAGGAGTCCCTGACG +
Preference number: 2 (lower is better)
Translates to: KLCHWCVSDTSVTIQSRSKTHGL*LEESLT
Trigger: CGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTT...TGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
3UTR-3UTR CCA 90 bp GCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGCAAAGATGGCCACAATaGAGACGTAGCTCATGGCTG +
Preference number: 2 (lower is better)
Translates to: ASQFYQAAGILFHPEIIGQRWPQ*RRSSWL
Trigger: CAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTG...CCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp AGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAAACGTATATAAACCGGGTAGAGAGAGCTaGCTCTCCCACCCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: STTDLWFLLSIPFSNVYKPGRES*LSHPCL
Trigger: CAGGCAGGGGTGGGAGAGCCAGCTCTCTCTACCCGG...TTTATATACGTTTGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp CAGCCCATCCTCAAGTACCTCCACAATAGGATGCTTGTCTTCAGCAGTGACTTTGGGAGGAGTCCAAGGTaGTGGGAAACTGGATTTCTT +
Preference number: 2 (lower is better)
Translates to: QPILKYLHNRMLVFSSDFGRSPR*WETGFL
Trigger: AAGAAATCCAGTTTCCCACCACCTTGGACTCCTCCC...AAAGTCACTGCTGAAGACAAGCATCCTATTGTGGAGGTACTTGAGGATGGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR TCA 90 bp TTTCCAGGCAGCCTTTCAAATCCCCTCTTTGCCTTAGTTGGTCAAAAGCCTGTGGTGGCAAGAATTCAGTaGAAGTCCCAGATTGTGGGA +
Preference number: 2 (lower is better)
Translates to: FPGSLSNPLFALVGQKPVVARIQ*KSQIVG
Trigger: TCCCACAATCTGGGACTTTCACTGAATTCTTGCCAC...CACAGGCTTTTGACCAACTAAGGCAAAGAGGGGATTTGAAAGGCTGCCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR GCA 90 bp TTTCCAGGCAGCCTTTCAAATCCCCTCTTTGCCTTAGTTGGTCAAAAGCCTGTGAAGAGAGGGTTAAAGTaGTGCAGAGGAAAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: FPGSLSNPLFALVGQKPVKRGLK*CRGKEG
Trigger: CCCTTCCTTTCCTCTGCAGCACTTTAACCCTCTCTT...CACAGGCTTTTGACCAACTAAGGCAAAGAGGGGATTTGAAAGGCTGCCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR GCA 90 bp CAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCATTTACCCAATTCTACCAGGCTaGAGGGATTCTTTTCCACCC +
Preference number: 2 (lower is better)
Translates to: QMPRAMPGTGSYNLLSIYPILPG*RDSFPP
Trigger: GGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGG...GTAAATGCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR GCA 90 bp CAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCATTTACGTGAGTCCTTTTCCCTaGAGGGGTCAAGAGAGAACT +
Preference number: 2 (lower is better)
Translates to: QMPRAMPGTGSYNLLSIYVSPFP*RGQERT
Trigger: AGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCAC...GTAAATGCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR GCA 90 bp GGCCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCCTGCTGTCTCGAAGATaGTGGTCGAATAATAGAAAA +
Preference number: 2 (lower is better)
Translates to: GPIASATYWKPMPMMKLLLLSRR*WSNNRK
Trigger: TTTTCTATTATTCGACCAGCATCTTCGAGACAGCAG...GAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CCA 90 bp TTTCCAGGCAGCCTTTCAAATCCCCTCTTTGCCTTAGTTGGTCAAAAGCCTGTGCCATCTTGCCACACATaGGCACATACTTTCCTGTTC +
Preference number: 2 (lower is better)
Translates to: FPGSLSNPLFALVGQKPVPSCHT*AHTFLF
Trigger: GAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGG...CACAGGCTTTTGACCAACTAAGGCAAAGAGGGGATTTGAAAGGCTGCCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp GGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGCTTGCTTTGATTCTGTaGAGCAGGTGGTCCACCAAA +
Preference number: 2 (lower is better)
Translates to: GKLCHWCVSDTSVTIQSRLALIL*SRWSTK
Trigger: TTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAG...CCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
3UTR-3UTR GCA 90 bp CAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCCTGCTGTCTCGAAGATaGTGGTCGAATAATAGAAAA +
Preference number: 2 (lower is better)
Translates to: QSFSSGPKYSSSVLGFTSLLSRR*WSNNRK
Trigger: TTTTCTATTATTCGACCAGCATCTTCGAGACAGCAG...GGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR GCA 90 bp GTATCATTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACAGTCAGCTCCCTTCCTTaGTTTGATTCTGTGGAGCAG +
Preference number: 2 (lower is better)
Translates to: VSFYSWSKVSYATGAFQTVSSLP*FDSVEQ
Trigger: CTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGAC...TGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAATGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
3UTR-3UTR GCA 90 bp AGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAAACGTATATAAACTGGGTTTCACCTCCTaGTCTAAAAGAGAGGGTGTC +
Preference number: 2 (lower is better)
Translates to: STTDLWFLLSIPFSNVYKLGFTS*SKREGV
Trigger: GACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAG...TTTATATACGTTTGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
3UTR-3UTR CCA 90 bp ATATATACATTTAGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAGGGAGGAGTCCAAGGTaGTGGGAAACTGGATTTCTT +
Preference number: 2 (lower is better)
Translates to: IYTFSTTDLWFLLSIPFSGRSPR*WETGFL
Trigger: AAGAAATCCAGTTTCCCACCACCTTGGACTCCTCCC...TGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACTAAATGTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CCA 90 bp AGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAAACGTATATAAACCATCTTGCCACACATaGGCACATACTTTCCTGTTC +
Preference number: 2 (lower is better)
Translates to: STTDLWFLLSIPFSNVYKPSCHT*AHTFLF
Trigger: GAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGG...TTTATATACGTTTGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR GCA 72 bp TCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCCCTaGCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAA +
Preference number: 3 (lower is better)
Translates to: SGPGRESWLSHP*LAPQSFSSGPK
Trigger: TTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR GCA 72 bp GCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTaGAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGC +
Preference number: 3 (lower is better)
Translates to: AEPAVREVSPFP*RGQERTPFARR
Trigger: GCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CAA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAGGGAAACTGGATTTCTaGTCTCCTGTCCTGCTCTCT +
Preference number: 3 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTGKLDF*SPVLLS
Trigger: AGAGAGCAGGACAGGAGACAAGAAATCCAGTTTCCC...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CAA 90 bp TCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCAGTGAAAGTCCCAGATaGTGGGAGGAGTCCAAGGTG +
Preference number: 3 (lower is better)
Translates to: SFSLQGSRENSLRQARWLSESPR*WEESKV
Trigger: CACCTTGGACTCCTCCCACAATCTGGGACTTTCACT...GAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CAA 90 bp AGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGAAGTTGCTCGTCCAGTaGGAGAAACCAGCCACAGCC +
Preference number: 3 (lower is better)
Translates to: REVSPFPCRGQERTPFARKLLVQ*EKPATA
Trigger: GGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACTT...CCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
3UTR-3UTR CAA 90 bp GTTAGGGCTCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCGGGAAACTGGATTTCTaGTCTCCTGTCCTGCTCTCT +
Preference number: 3 (lower is better)
Translates to: VRAPSWQPWETIGVEPQAGKLDF*SPVLLS
Trigger: AGAGAGCAGGACAGGAGACAAGAAATCCAGTTTCCC...GGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CAA 90 bp CCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTAAGTTGCTCGTCCAGTaGGAGAAACCAGCCACAGCC +
Preference number: 3 (lower is better)
Translates to: PTPAWPLSRSHLALNTQVKLLVQ*EKPATA
Trigger: GGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACTT...AACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR TCA 72 bp GCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTaGAGAGTGCCCCTATCATGGGTTTCACTGCCCATC +
Preference number: 3 (lower is better)
Translates to: ASLLPCLQLCPW*RVPLSWVSLPI
Trigger: GATGGGCAGTGAAACCCATGATAGGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR GCA 72 bp GTCCCTGGTGAAGAGTGCCCCTATCATGGGTTTCACTaGCCATCTGTGACATGGGCTGACACCTCCCTCACA +
Preference number: 3 (lower is better)
Translates to: VPGEECPYHGFH*PSVTWADTSLT
Trigger: TGTGAGGGAGGTGTCAGCCCATGTCACAGATGGGCAGTGAAACCCATGATAGGGGCACTCTTCACCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR CCA 72 bp GGTTTCACCTCCTGCTCTAAAAGAGAGGGTGTCCGGTaGAAGGCAGCTGAGATCTGGTCAAACGTCCGGCCT +
Preference number: 3 (lower is better)
Translates to: GFTSCSKREGVR*KAAEIWSNVRP
Trigger: AGGCCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGGAGGTGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR CAA 90 bp CCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCAATGCCAATGATGAAGTaGCTCGTCCAGTTGGAGAAA +
Preference number: 3 (lower is better)
Translates to: PFPCRGQERTPFARRGGSMPMMK*LVQLEK
Trigger: TTTCTCCAACTGGACGAGCAACTTCATCATTGGCAT...TGAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
3UTR TCA 72 bp GTCTCCTGTCCTGCTCTCTGCTCTGGTTTGTCCCACTaGGAAAGTCTAGACCTGTCTTCCCTCCAATCCCCC +
Preference number: 3 (lower is better)
Translates to: VSCPALCSGLSH*ESLDLSSLQSP
Trigger: GGGGGATTGGAGGGAAGACAGGTCTAGACTTTCTCAGTGGGACAAACCAGAGCAGAGAGCAGGACAGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR GCA 72 bp TGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTaGCCCTATCATGGGTTTCACTGCCCATCTGTGACA +
Preference number: 3 (lower is better)
Translates to: CCHVSSCVPGEE*PYHGFHCPSVT
Trigger: TGTCACAGATGGGCAGTGAAACCCATGATAGGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR CCA 72 bp AAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTaGTCAAACGTCCGGCCTCGAGTTTCAGGTACTCTT +
Preference number: 3 (lower is better)
Translates to: KREGVRWKAAEI*SNVRPRVSGTL
Trigger: AAGAGTACCTGAAACTCGAGGCCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR TCA 72 bp AAGAGTGCCCCTATCATGGGTTTCACTGCCCATCTGTaGCATGGGCTGACACCTCCCTCACAGAGTGAGTAT +
Preference number: 3 (lower is better)
Translates to: KSAPIMGFTAHL*HGLTPPSQSEY
Trigger: ATACTCACTCTGTGAGGGAGGTGTCAGCCCATGTCACAGATGGGCAGTGAAACCCATGATAGGGGCACTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR CCA 72 bp CAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTaGAGCAGGTGGTCCACCAAACTGACCCAAAGACCC +
Preference number: 3 (lower is better)
Translates to: QSRSAPFLALIL*SRWSTKLTQRP
Trigger: GGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
3UTR-3UTR CAA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGGGGAAACTGGATTTCTaGTCTCCTGTCCTGCTCTCT +
Preference number: 3 (lower is better)
Translates to: CPESAWQEFSESPRLWEEGKLDF*SPVLLS
Trigger: AGAGAGCAGGACAGGAGACAAGAAATCCAGTTTCCC...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CAA 90 bp GGCCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCAAGGTGAAGACTGTGTaGACCACACCAGCTCCTATG +
Preference number: 3 (lower is better)
Translates to: GPIASATYWKPMPMMKLLKVKTV*TTPAPM
Trigger: CATAGGAGCTGGTGTGGTCAACACAGTCTTCACCTT...GAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
3UTR-3UTR CAA 90 bp TTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGGGGAAACTGGATTTCTaGTCTCCTGTCCTGCTCTCT +
Preference number: 3 (lower is better)
Translates to: FHLATHGHILSCSLLPWKGKLDF*SPVLLS
Trigger: AGAGAGCAGGACAGGAGACAAGAAATCCAGTTTCCC...CTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR-3UTR CAA 90 bp TCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGTCCGGATGCCAATGATGAAGTaGCTCGTCCAGTTGGAGAAA +
Preference number: 3 (lower is better)
Translates to: SKREGVRWKAAEIWSNVRMPMMK*LVQLEK
Trigger: TTTCTCCAACTGGACGAGCAACTTCATCATTGGCAT...CCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR CCA 72 bp TCAGTGAAAGTCCCAGATTGTGGGAGGAGTCCAAGGTaGTGGGAAACTGGATTTCTTGTCTCCTGTCCTGCT +
Preference number: 3 (lower is better)
Translates to: SVKVPDCGRSPR*WETGFLVSCPA
Trigger: AGCAGGACAGGAGACAAGAAATCCAGTTTCCCACCACCTTGGACTCCTCCCACAATCTGGGACTTTCACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR CCA 72 bp TCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTaGGAGGAGTCCAAGGTGGTGGGAAACTGGATTTCT +
Preference number: 3 (lower is better)
Translates to: SAWQEFSESPRL*EESKVVGNWIS
Trigger: AGAAATCCAGTTTCCCACCACCTTGGACTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
3UTR GCA 72 bp AGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTaGTGGGTTTCACCTCCTGCTCTAAAAGAGAGGGTG +
Preference number: 3 (lower is better)
Translates to: SRSHLALNTQVL*WVSPPALKERV
Trigger: CACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR CAA 90 bp CAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCATGCCAATGATGAAGTaGCTCGTCCAGTTGGAGAAA +
Preference number: 3 (lower is better)
Translates to: QSFSSGPKYSSSVLGFTSMPMMK*LVQLEK
Trigger: TTTCTCCAACTGGACGAGCAACTTCATCATTGGCAT...GGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
3UTR-3UTR CAA 90 bp CAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCATTTACTCCACAATAGGATGCTaGTCTTCAGCAGTGACTTTA +
Preference number: 3 (lower is better)
Translates to: QMPRAMPGTGSYNLLSIYSTIGC*SSAVTL
Trigger: TAAAGTCACTGCTGAAGACAAGCATCCTATTGTGGA...GTAAATGCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
3UTR-3UTR CAA 90 bp ATATATACATTTAGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCATCCTTCTTGGCAGCCTaGGGAAACCATCGGGGTAGA +
Preference number: 3 (lower is better)
Translates to: IYTFSTTDLWFLLSIPFSSFLAA*GNHRGR
Trigger: TCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA...TGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACTAAATGTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp CGGGGTAGAGCCCCAAGCCTAGAGGCGGGAGCCTGCCGTCCTTCCATCTTGCCAAGGGCGCCCCGCAGGTaGGTGGGAGCAATCTCCCCC +
Preference number: 4 (lower is better)
Translates to: RGRAPSLEAGACRPSILPRAPRR*VGAISP
Trigger: GGGGGAGATTGCTCCCACTCACCTGCGGGGCGCCCT...TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAGGCTTGGGGCTCTACCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCCTGGAGCGCAGAACCTaGGGAGGCCGCGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: AEERKGSLGRVERAGSPTLERRT*GGRGGP
Trigger: GGGACCCCCGCGGCCTCCGCAGGTTCTGCGCTCCAG...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR TCA 90 bp CGGGGTAGAGCCCCAAGCCTAGAGGCGGGAGCCTGCCGTCCTTCCATCTTGCCAGCAGCACGACCGCAATaGTCAGGGGCTGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: RGRAPSLEAGACRPSILPAARPQ*SGAAGG
Trigger: CCCACCGGCAGCCCCTGATCATTGCGGTCGTGCTGC...TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAGGCTTGGGGCTCTACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCGGTCCCGGAGTGACGTaGGAGGGCGGGCCCGATGGG +
Preference number: 4 (lower is better)
Translates to: AWHPCCHVSSCVPGEECPGPGVT*EGGPDG
Trigger: CCCATCGGGCCCGCCCTCGCACGTCACTCCGGGACC...GGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp AGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACACTGGAGCGCAGAACCTaGGGAGGCCGCGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RKREGRVAHPDGHGQTTTLERRT*GGRGGP
Trigger: GGGACCCCCGCGGCCTCCGCAGGTTCTGCGCTCCAG...TGTTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR GCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAGCCGGTGGGTACGGCTaGCCAGGAGCTGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTAGGYG*PGAGAG
Trigger: CCCTGCTCCAGCTCCTGGGCAGCCGTACCCACCGGC...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR TCA 90 bp CGGGGTAGAGCCCCAAGCCTAGAGGCGGGAGCCTGCCGTCCTTCCATCTTGCCACGATCCTGGAGTCTCTaGCTCCGGCCTGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RGRAPSLEAGACRPSILPRSWSL*LRPGAQ
Trigger: CTGCGCTCCAGGCCGGAGTCAGAGACTCCAGGATCG...TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAGGCTTGGGGCTCTACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp CCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCAAGGGCGCCCCGCAGGTaGGTGGGAGCAATCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PFPCRGQERTPFARRGGSRAPRR*VGAISP
Trigger: GGGGGAGATTGCTCCCACTCACCTGCGGGGCGCCCT...TGAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCCAATGGCCAGTTGGTTaGGCGTCCCCAGGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: AEERKGSLGRVERAGSPTQWPVG*ASPGRP
Trigger: GGGGCGCCCTGGGGACGCTCAACCAACTGGCCATTG...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCGGGCAGGTAGCACTGTaGGGCCCAGGAGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: AEERKGSLGRVERAGSPTGQVAL*GPGAVA
Trigger: GGCCACTGCTCCTGGGCCTCACAGTGCTACCTGCCC...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR GCA 90 bp GAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAAGCCGGTGGGTACGGCTaGCCAGGAGCTGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: EGRGRGEWPTLMATAKPQAGGYG*PGAGAG
Trigger: CCCTGCTCCAGCTCCTGGGCAGCCGTACCCACCGGC...TTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAGGGTGCCTGGAGGGATaGAGCTGGGTCCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTGCLEG*SWVPQA
Trigger: GGCCTGAGGGACCCAGCTCCATCCCTCCAGGCACCC...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CGGGGTAGAGCCCCAAGCCTAGAGGCGGGAGCCTGCCGTCCTTCCATCTTGCCAGGTGGTGAGGGTGCCTaGAGGGATGGAGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RGRAPSLEAGACRPSILPGGEGA*RDGAGS
Trigger: GGACCCAGCTCCATCCCTCCAGGCACCCTCACCACC...TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAGGCTTGGGGCTCTACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GGCTCTCCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTGCCGGGCGGGGTCCCTaGCTGAAGAGCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: GSPTPAWPLSRSHLALNTAGRGP*LKSSAT
Trigger: CGTGGCCGAGCTCTTCAGCCAGGGACCCCGCCCGGC...AGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR TCA 90 bp CCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCAGGGCAGGTAGCACTGTaGGGCCCAGGAGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PFPCRGQERTPFARRGGSGQVAL*GPGAVA
Trigger: GGCCACTGCTCCTGGGCCTCACAGTGCTACCTGCCC...TGAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp AGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACAGCAGCACGACCGCAATaGTCAGGGGCTGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: RKREGRVAHPDGHGQTTTAARPQ*SGAAGG
Trigger: CCCACCGGCAGCCCCTGATCATTGCGGTCGTGCTGC...TGTTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR TCA 90 bp CGGGGTAGAGCCCCAAGCCTAGAGGCGGGAGCCTGCCGTCCTTCCATCTTGCCACTTGCCCTGGAAGGCTaGGCCTGCAGTGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RGRAPSLEAGACRPSILPLALEG*ACSEGG
Trigger: ACCTCCCTCACTGCAGGCTCAGCCTTCCAGGGCAAG...TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAGGCTTGGGGCTCTACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp CCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCAGGACACCCAGGGAGGTaGAGCCAGTGGCTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: PFPCRGQERTPFARRGGSGHPGR*SQWLGP
Trigger: TGGCCCGAGCCACTGGCTTCACCTCCCTGGGTGTCC...TGAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR GCA 90 bp GGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCTATCCTGGAGCGCAGAACCTaGGGAGGCCGCGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GILAAMSPAVSLVKSAPILERRT*GGRGGP
Trigger: GGGACCCCCGCGGCCTCCGCAGGTTCTGCGCTCCAG...GATAGGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp GAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAAGGTCCCTCAGGCCCCTaGCTCCCCAGCCACGTCTCA +
Preference number: 4 (lower is better)
Translates to: EGRGRGEWPTLMATAKPQGPSGP*LPSHVS
Trigger: TGAGACGTGGCTGGGGAGGCAGGGGCCTGAGGGACC...TTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR GCA 90 bp GGCTCTCCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTGCCGGTGGGTACGGCTaGCCAGGAGCTGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSPTPAWPLSRSHLALNTAGGYG*PGAGAG
Trigger: CCCTGCTCCAGCTCCTGGGCAGCCGTACCCACCGGC...AGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCCTCCCGCGGATCTGGTaGAGCGGGGCTGGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: AEERKGSLGRVERAGSPTLPRIW*SGAGGK
Trigger: TTTTCCCCCAGCCCCGCTCCACCAGATCCGCGGGAG...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp AGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACAGGGTGCCTGGAGGGATaGAGCTGGGTCCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RKREGRVAHPDGHGQTTTGCLEG*SWVPQA
Trigger: GGCCTGAGGGACCCAGCTCCATCCCTCCAGGCACCC...TGTTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp AGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACAATCAGGGGCTGCCGGTaGGTACGGCTGCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RKREGRVAHPDGHGQTTTIRGCR*VRLPRS
Trigger: GCTCCTGGGCAGCCGTACCCACCGGCAGCCCCTGAT...TGTTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCAATCAGGGGCTGCCGGTaGGTACGGCTGCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PFPCRGQERTPFARRGGSIRGCR*VRLPRS
Trigger: GCTCCTGGGCAGCCGTACCCACCGGCAGCCCCTGAT...TGAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp TCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCAACCAGCCACAGCCATaGCTGCCGGGCGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SFSLQGSRENSLRQARWLNQPQP*LPGGVP
Trigger: AGGGACCCCGCCCGGCAGCCATGGCTGTGGCTGGTT...GAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCAACCAGCCACAGCCATaGCTGCCGGGCGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: AWHPCCHVSSCVPGEECPNQPQP*LPGGVP
Trigger: AGGGACCCCGCCCGGCAGCCATGGCTGTGGCTGGTT...GGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp GTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCTCTCCCACCCCTGCCTaGCCCCTCAGTCGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: VGPWAGPGILAAMSPAVSSPTPA*PLSRSH
Trigger: ATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGA...GGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp GTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGACGAGGGCGCCCCGCAGGTaGGTGGGAGCAATCTCCCCC +
Preference number: 4 (lower is better)
Translates to: VHQTDPKTHGLWLEESLTRAPRR*VGAISP
Trigger: GGGGGAGATTGCTCCCACTCACCTGCGGGGCGCCCT...CGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp TCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTAGAGGCGCAATGGCCAGTTGGTTaGGCGTCCCCAGGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: SFLAALGNHRGRAPSLEAQWPVG*ASPGRP
Trigger: GGGGCGCCCTGGGGACGCTCAACCAACTGGCCATTG...CGCCTCTAGGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp GGCTCTCCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTGGGCAGGTAGCACTGTaGGGCCCAGGAGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: GSPTPAWPLSRSHLALNTGQVAL*GPGAVA
Trigger: GGCCACTGCTCCTGGGCCTCACAGTGCTACCTGCCC...AGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR TCA 90 bp GCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCGAGAGTGGCCCACCCTaGTGGCCACGGCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: AWHPCCHVSSCVPGEECPESGPP*WPRPNH
Trigger: GTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTC...GGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp CGGGGTAGAGCCCCAAGCCTAGAGGCGGGAGCCTGCCGTCCTTCCATCTTGCCAGGCAGGAGAATGGCGTaGACCTGGGAGACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: RGRAPSLEAGACRPSILPGRRMA*TWETAC
Trigger: GCAAGCTGTCTCCCAGGTTCACGCCATTCTCCTGCC...TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAGGCTTGGGGCTCTACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp GGCTCTCCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTGGACACCCAGGGAGGTaGAGCCAGTGGCTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: GSPTPAWPLSRSHLALNTGHPGR*SQWLGP
Trigger: TGGCCCGAGCCACTGGCTTCACCTCCCTGGGTGTCC...AGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR GCA 90 bp CCCTGGAAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTGCCACAGGCTGGCAGTaGCCAGGAGGGACTCCAAGC +
Preference number: 4 (lower is better)
Translates to: PWKAEPAVREVSPFPCRGATGWQ*PGGTPS
Trigger: GCTTGGAGTCCCTCCTGGGCACTGCCAGCCTGTGGC...ACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGGCCGGTGGGTACGGCTaGCCAGGAGCTGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VVHQTDPKTHGLWLEESLAGGYG*PGAGAG
Trigger: CCCTGCTCCAGCTCCTGGGCAGCCGTACCCACCGGC...CAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp TCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCGCAATGATCAGGGGCTaGCGGTGGGTACGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SFSLQGSRENSLRQARWLAMIRG*RWVRLP
Trigger: GGGCAGCCGTACCCACCGGCAGCCCCTGATCATTGC...GAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCAGCTGCTGGCTCAGCTaGAGCACGACCGCAATGATC +
Preference number: 4 (lower is better)
Translates to: VGPWAGPGILAAMSPAVSSCWLS*STTAMI
Trigger: GATCATTGCGGTCGTGCTGCAGCTGAGCCAGCAGCT...GGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp GACCACACCAGCTCCTATGGTGGCATAGGCAGGCTGGCCTACCCCTGCTGTCTCTGGCTCTCCCACCCCTaGCTGGCCCCTCAGTCGTTC +
Preference number: 4 (lower is better)
Translates to: DHTSSYGGIGRLAYPCCLWLSHP*LAPQSF
Trigger: GAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCCA...GAGACAGCAGGGGTAGGCCAGCCTGCCTATGCCACCATAGGAGCTGGTGTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR CCA 90 bp CCCTGGAAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCTCCCGCGGATCTGGTaGAGCGGGGCTGGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: PWKAEPAVREVSPFPCRGLPRIW*SGAGGK
Trigger: TTTTCCCCCAGCCCCGCTCCACCAGATCCGCGGGAG...ACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTTCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp GTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGACGCGAGGGCGGGCCCGATaGGACCCACAGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: VHQTDPKTHGLWLEESLTRGRAR*DPQPQA
Trigger: GGCTTGTGGCTGTGGGTCCCATCGGGCCCGCCCTCG...CGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571308.5
ENST00000671706.1
CDS-3UTR CCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACATCTCTGACTCCGGCCTaGAGCGCAGAACCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTSLTPA*SAEPAE
Trigger: CTCCGCAGGTTCTGCGCTCCAGGCCGGAGTCAGAGA...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCTCGGAGCCTATCTGTTaGAAGCCCGACGGCATCTCG +
Preference number: 4 (lower is better)
Translates to: VGPWAGPGILAAMSPAVSSEPIC*KPDGIS
Trigger: CGAGATGCCGTCGGGCTTCCAACAGATAGGCTCCGA...GGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp GGCTCTCCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTGGGTGCCTGGAGGGATaGAGCTGGGTCCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GSPTPAWPLSRSHLALNTGCLEG*SWVPQA
Trigger: GGCCTGAGGGACCCAGCTCCATCCCTCCAGGCACCC...AGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp AGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCGGGTGCCTGGAGGGATaGAGCTGGGTCCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RAWHPCCHVSSCVPGEECGCLEG*SWVPQA
Trigger: GGCCTGAGGGACCCAGCTCCATCCCTCCAGGCACCC...GCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACACGCCCACGGAAAAGATaGCCACGGAGAGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTRPRKR*PRRGPR
Trigger: TCTGGGCCCTCTCCGTGGCCATCTTTTCCGTGGGCG...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp AGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACACGCCCCGCAGGTGAGTaGGAGCAATCTCCCCCACGT +
Preference number: 4 (lower is better)
Translates to: RKREGRVAHPDGHGQTTTRPAGE*EQSPPR
Trigger: ACGTGGGGGAGATTGCTCCCACTCACCTGCGGGGCG...TGTTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GTGCTGGGTTTCACCTCCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGCCGGGCGGGGTCCCTaGCTGAAGAGCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: VLGFTSCSKREGVRWKAAAGRGP*LKSSAT
Trigger: CGTGGCCGAGCTCTTCAGCCAGGGACCCCGCCCGGC...AGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp TCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTAGAGGCGGGGGATGTGGGGCCGTaGGCAGGGCCTGGCATCCTT +
Preference number: 4 (lower is better)
Translates to: SFLAALGNHRGRAPSLEAGDVGP*AGPGIL
Trigger: AAGGATGCCAGGCCCTGCCCACGGCCCCACATCCCC...CGCCTCTAGGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp CATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGGCTGAGCCTGCAGTGGGGGAGGAGGGGATGTaGGGCCGTGGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: HGHILSCSLLPWKAEPAVGEEGM*GRGQGL
Trigger: CAGGCCCTGCCCACGGCCCCACATCCCCTCCTCCCC...CACTGCAGGCTCAGCCTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp CGGGGTAGAGCCCCAAGCCTAGAGGCGGGAGCCTGCCGTCCTTCCATCTTGCCACCGCCAGGACATTGTTaGCCAGCATGGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RGRAPSLEAGACRPSILPPPGHC*PAWPFS
Trigger: GGAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGG...TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAGGCTTGGGGCTCTACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp GTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGCAATGGCCAGTTGGTTaGGCGTCCCCAGGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: VVHQTDPKTHGLWLEESLQWPVG*ASPGRP
Trigger: GGGGCGCCCTGGGGACGCTCAACCAACTGGCCATTG...CAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp GTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGGGGCAGGTAGCACTGTaGGGCCCAGGAGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: VVHQTDPKTHGLWLEESLGQVAL*GPGAVA
Trigger: GGCCACTGCTCCTGGGCCTCACAGTGCTACCTGCCC...CAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCCCGGTGGAAGGCAGCTaGGATCTGGTCAAACGTCCG +
Preference number: 4 (lower is better)
Translates to: AEERKGSLGRVERAGSPTPVEGS*DLVKRP
Trigger: CGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGG...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR TCA 90 bp TCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTAGAGGCGGAGAGTGGCCCACCCTaGTGGCCACGGCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: SFLAALGNHRGRAPSLEAESGPP*WPRPNH
Trigger: GTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTC...CGCCTCTAGGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp AAAGATGGCCACAATGGAGACGTAGCTCATGGCTGGAACTCGCTCCAGCAGGAGCTGGAGCGCAGAACCTaGGGAGGCCGCGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: KDGHNGDVAHGWNSLQQELERRT*GGRGGP
Trigger: GGGACCCCCGCGGCCTCCGCAGGTTCTGCGCTCCAG...CTCCTGCTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCATTGTGGCCATCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR GCA 90 bp GTGCTGGGTTTCACCTCCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGCCGGTGGGTACGGCTaGCCAGGAGCTGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VLGFTSCSKREGVRWKAAAGGYG*PGAGAG
Trigger: CCCTGCTCCAGCTCCTGGGCAGCCGTACCCACCGGC...AGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp TCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTAGAGGCGGCAATGATCAGGGGCTaGCGGTGGGTACGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SFLAALGNHRGRAPSLEAAMIRG*RWVRLP
Trigger: GGGCAGCCGTACCCACCGGCAGCCCCTGATCATTGC...CGCCTCTAGGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GTTAGGGCTCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCGCAATGATCAGGGGCTaGCGGTGGGTACGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VRAPSWQPWETIGVEPQAAMIRG*RWVRLP
Trigger: GGGCAGCCGTACCCACCGGCAGCCCCTGATCATTGC...GGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GTTAGGGCTCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTGGCTCTCCCACCCCTaGCTGGCCCCTCAGTCGTTC +
Preference number: 4 (lower is better)
Translates to: VRAPSWQPWETIGVEPQAWLSHP*LAPQSF
Trigger: GAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCCA...GGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp CCCTGGAAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTAGGGGAATGAGGGGGTaGTCAGACCACCCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: PWKAEPAVREVSPFPCRGRGMRG*SDHPSP
Trigger: GGGGGAAGGGTGGTCTGAGCACCCCCTCATTCCCCT...ACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTTCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCTTTCCTGTTCCCTCTTaGCCTGGAAGGCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VGPWAGPGILAAMSPAVSFPVPS*PGRLSL
Trigger: CAGGCTCAGCCTTCCAGGGCAAGAGGGAACAGGAAA...GGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp GAGTGCCCCTATCATGGGTTTCACTGCCCATCTGTGACATGGGCTGACACCTCCCGAGGGCGGGCCCGATaGGACCCACAGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: ECPYHGFHCPSVTWADTSRGRAR*DPQPQA
Trigger: GGCTTGTGGCTGTGGGTCCCATCGGGCCCGCCCTCG...GGAGGTGTCAGCCCATGTCACAGATGGGCAGTGAAACCCATGATAGGGGCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp CATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGGCTGAGCCTGCAGTGCGAGGGCGGGCCCGATaGGACCCACAGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: HGHILSCSLLPWKAEPAVRGRAR*DPQPQA
Trigger: GGCTTGTGGCTGTGGGTCCCATCGGGCCCGCCCTCG...CACTGCAGGCTCAGCCTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp TCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTAGAGGCGCGCCCCGCAGGTGAGTaGGAGCAATCTCCCCCACGT +
Preference number: 4 (lower is better)
Translates to: SFLAALGNHRGRAPSLEARPAGE*EQSPPR
Trigger: ACGTGGGGGAGATTGCTCCCACTCACCTGCGGGGCG...CGCCTCTAGGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp AGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACACTGGAGCAGGGACAGTaGCCGCTCACGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: RKREGRVAHPDGHGQTTTLEQGQ*PLTLQL
Trigger: AAGCTGGAGCGTGAGCGGCCACTGTCCCTGCTCCAG...TGTTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGACGGGGAAGATCAGGGGCTGCCGGTaGGTACGGCTGCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QTDPKTHGLWLEESLTGKIRGCR*VRLPRS
Trigger: GCTCCTGGGCAGCCGTACCCACCGGCAGCCCCTGAT...CTTCCCCGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCCCACACCAGCTCCTATaGTGGCATAGGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AEERKGSLGRVERAGSPTPHQLL*WHRQAG
Trigger: GCCAGCCTGCCTATGCCACCATAGGAGCTGGTGTGG...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGACGAACCAGCCACAGCCATaGCTGCCGGGCGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: VHQTDPKTHGLWLEESLTNQPQP*LPGGVP
Trigger: AGGGACCCCGCCCGGCAGCCATGGCTGTGGCTGGTT...CGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp AAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAACCAGCCACAGCCATaGCTGCCGGGCGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: KAEPAVREVSPFPCRGQENQPQP*LPGGVP
Trigger: AGGGACCCCGCCCGGCAGCCATGGCTGTGGCTGGTT...CTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp TGTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCAGAGAGGGTGTCCGGTaGAAGGCAGCTGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: CGAVGRAWHPCCHVSSCVREGVR*KAAEIW
Trigger: CCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCT...GACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp AGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACAGGCAGGAGAATGGCGTaGACCTGGGAGACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: RKREGRVAHPDGHGQTTTGRRMA*TWETAC
Trigger: GCAAGCTGTCTCCCAGGTTCACGCCATTCTCCTGCC...TGTTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCAGGCTGGCCTACCCCTaGTGTCTCGAAGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: AEERKGSLGRVERAGSPTRLAYP*CLEDAG
Trigger: ACCAGCATCTTCGAGACAGCAGGGGTAGGCCAGCCT...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR GCA 90 bp TCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTAGAGGCGAGGGGAATGAGGGGGTaGTCAGACCACCCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: SFLAALGNHRGRAPSLEARGMRG*SDHPSP
Trigger: GGGGGAAGGGTGGTCTGAGCACCCCCTCATTCCCCT...CGCCTCTAGGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCAAATGCCAAGAGCAATaGCCGGCACTGGCAGCTACA +
Preference number: 4 (lower is better)
Translates to: VGPWAGPGILAAMSPAVSKCQEQ*PALAAT
Trigger: TGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTT...GGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp TCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGTCCGGCGAGGGCGGGCCCGATaGGACCCACAGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: SKREGVRWKAAEIWSNVRRGRAR*DPQPQA
Trigger: GGCTTGTGGCTGTGGGTCCCATCGGGCCCGCCCTCG...CCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR CCA 90 bp CAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGACGGGGAAGGGTGGTGAGGGTGCCTaGAGGGATGGAGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: QTDPKTHGLWLEESLTGKGGEGA*RDGAGS
Trigger: GGACCCAGCTCCATCCCTCCAGGCACCCTCACCACC...CTTCCCCGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp AGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGGGTGGTGAGGGTGCCTaGAGGGATGGAGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: REVSPFPCRGQERTPFARGGEGA*RDGAGS
Trigger: GGACCCAGCTCCATCCCTCCAGGCACCCTCACCACC...CCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCTCTCCCCCACGTACATaGGCACCAGCCCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: AEERKGSLGRVERAGSPTSPPRT*APALMS
Trigger: TGACATCAGGGCTGGTGCCCATGTACGTGGGGGAGA...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACATCTCCCCCACGTACATaGGCACCAGCCCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTSPPRT*APALMS
Trigger: TGACATCAGGGCTGGTGCCCATGTACGTGGGGGAGA...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp AAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGCGCCCCGCAGGTGAGTaGGAGCAATCTCCCCCACGT +
Preference number: 4 (lower is better)
Translates to: KAEPAVREVSPFPCRGQERPAGE*EQSPPR
Trigger: ACGTGGGGGAGATTGCTCCCACTCACCTGCGGGGCG...CTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCTATCCGCCCCGCAGGTGAGTaGGAGCAATCTCCCCCACGT +
Preference number: 4 (lower is better)
Translates to: GILAAMSPAVSLVKSAPIRPAGE*EQSPPR
Trigger: ACGTGGGGGAGATTGCTCCCACTCACCTGCGGGGCG...GATAGGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp TCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCCCACACCAGCTCCTATaGTGGCATAGGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SFSLQGSRENSLRQARWLPHQLL*WHRQAG
Trigger: GCCAGCCTGCCTATGCCACCATAGGAGCTGGTGTGG...GAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCCCACAGTCATCAGGATaGCACAGCCACACATGCCCG +
Preference number: 4 (lower is better)
Translates to: AEERKGSLGRVERAGSPTPQSSG*HSHTCP
Trigger: CGGGCATGTGTGGCTGTGCCATCCTGATGACTGTGG...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCGCCGGGCGGGGTCCCTaGCTGAAGAGCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: ALILWSRWSTKLTQRPMVAGRGP*LKSSAT
Trigger: CGTGGCCGAGCTCTTCAGCCAGGGACCCCGCCCGGC...GACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGGCCGGGCGGGGTCCCTaGCTGAAGAGCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: CPESAWQEFSESPRLWEEAGRGP*LKSSAT
Trigger: CGTGGCCGAGCTCTTCAGCCAGGGACCCCGCCCGGC...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAAGAGAGGGTGTCCGGTaGAAGGCAGCTGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTREGVR*KAAEIW
Trigger: CCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCT...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCGAAAGTCCCAGATTGTaGGAGGAGTCCAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VGPWAGPGILAAMSPAVSESPRL*EESKVV
Trigger: CACCACCTTGGACTCCTCCCACAATCTGGGACTTTC...GGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp TCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCCACTGCACTCGAGCCTaGGCGACAGAGCGAGACTGT +
Preference number: 4 (lower is better)
Translates to: SFSLQGSRENSLRQARWLHCTRA*ATERDC
Trigger: ACAGTCTCGCTCTGTCGCCCAGGCTCGAGTGCAGTG...GAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGGGGGAGGAGGGGATGTaGGGCCGTGGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: CPESAWQEFSESPRLWEEGEEGM*GRGQGL
Trigger: CAGGCCCTGCCCACGGCCCCACATCCCCTCCTCCCC...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp AGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACACAGGGGCGGCGAAGATaGAAGAACCGATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: RKREGRVAHPDGHGQTTTQGRRR*KNRSWS
Trigger: ACTCCAGGATCGGTTCTTTCATCTTCGCCGCCCCTG...TGTTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR TCA 90 bp TCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCCCGCCAGGACATTGTTaGCCAGCATGGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SFSLQGSRENSLRQARWLPPGHC*PAWPFS
Trigger: GGAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGG...GAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp AAAGATGGCCACAATGGAGACGTAGCTCATGGCTGGAACTCGCTCCAGCAGGAGGCAGCACGACCGCAATaGTCAGGGGCTGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: KDGHNGDVAHGWNSLQQEAARPQ*SGAAGG
Trigger: CCCACCGGCAGCCCCTGATCATTGCGGTCGTGCTGC...CTCCTGCTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCATTGTGGCCATCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR TCA 90 bp CCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTGAGAGTGGCCCACCCTaGTGGCCACGGCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: PTPAWPLSRSHLALNTQVESGPP*WPRPNH
Trigger: GTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTC...AACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR TCA 90 bp AAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGCTTGCCCTGGAAGGCTaGGCCTGCAGTGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: KAEPAVREVSPFPCRGQELALEG*ACSEGG
Trigger: ACCTCCCTCACTGCAGGCTCAGCCTTCCAGGGCAAG...CTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp CCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCAGGGCCATTCCAGAGGTaGGCAGTTACCGAGACCAAG +
Preference number: 4 (lower is better)
Translates to: PFPCRGQERTPFARRGGSGPFQR*AVTETK
Trigger: CTTGGTCTCGGTAACTGCTCACCTCTGGAATGGCCC...TGAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR GCA 90 bp TTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGGGTCCCGGAGTGACGTaGGAGGGCGGGCCCGATGGG +
Preference number: 4 (lower is better)
Translates to: FHLATHGHILSCSLLPWKGPGVT*EGGPDG
Trigger: CCCATCGGGCCCGCCCTCGCACGTCACTCCGGGACC...CTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp CCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTCTGGAGCGCAGAACCTaGGGAGGCCGCGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PHSLRNILETHANDEVARLERRT*GGRGGP
Trigger: GGGACCCCCGCGGCCTCCGCAGGTTCTGCGCTCCAG...ACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp CCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGGGTCCCTCAGGCCCCTaGCTCCCCAGCCACGTCTCA +
Preference number: 4 (lower is better)
Translates to: PALKERVSGGRQLRSGQTGPSGP*LPSHVS
Trigger: TGAGACGTGGCTGGGGAGGCAGGGGCCTGAGGGACC...CGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp CATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGGCTGAGCCTGCAGTGGCCACAGGCTGGCAGTaGCCAGGAGGGACTCCAAGC +
Preference number: 4 (lower is better)
Translates to: HGHILSCSLLPWKAEPAVATGWQ*PGGTPS
Trigger: GCTTGGAGTCCCTCCTGGGCACTGCCAGCCTGTGGC...CACTGCAGGCTCAGCCTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp CCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTGCCACAGGCTGGCAGTaGCCAGGAGGGACTCCAAGC +
Preference number: 4 (lower is better)
Translates to: PTPAWPLSRSHLALNTQVATGWQ*PGGTPS
Trigger: GCTTGGAGTCCCTCCTGGGCACTGCCAGCCTGTGGC...AACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp AGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAGCCGGTGGGTACGGCTaGCCAGGAGCTGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSLPCFDSVEQVVHQTDPAGGYG*PGAGAG
Trigger: CCCTGCTCCAGCTCCTGGGCAGCCGTACCCACCGGC...TGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp CCCTGGAAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTAGCTGCTGGCTCAGCTaGAGCACGACCGCAATGATC +
Preference number: 4 (lower is better)
Translates to: PWKAEPAVREVSPFPCRGSCWLS*STTAMI
Trigger: GATCATTGCGGTCGTGCTGCAGCTGAGCCAGCAGCT...ACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp CCCTGGAAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTAGGCTGGCCTACCCCTaGTGTCTCGAAGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: PWKAEPAVREVSPFPCRGRLAYP*CLEDAG
Trigger: ACCAGCATCTTCGAGACAGCAGGGGTAGGCCAGCCT...ACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGGTTTCACCTCCTaGTCTAAAAGAGAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: VGPWAGPGILAAMSPAVSLGFTS*SKREGV
Trigger: GACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAG...GGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp TTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGGGGCTCCCGCGGATCTaGTGGAGCGGGGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: FHLATHGHILSCSLLPWKGLPRI*WSGAGG
Trigger: TCCCCCAGCCCCGCTCCACCAGATCCGCGGGAGCCC...CTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp CCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCATCGGAGCCTATCTGTTaGAAGCCCGACGGCATCTCG +
Preference number: 4 (lower is better)
Translates to: PFPCRGQERTPFARRGGSSEPIC*KPDGIS
Trigger: CGAGATGCCGTCGGGCTTCCAACAGATAGGCTCCGA...TGAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp AGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACATCGGAGCCTATCTGTTaGAAGCCCGACGGCATCTCG +
Preference number: 4 (lower is better)
Translates to: RKREGRVAHPDGHGQTTTSEPIC*KPDGIS
Trigger: CGAGATGCCGTCGGGCTTCCAACAGATAGGCTCCGA...TGTTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGGGGTGCCTGGAGGGATaGAGCTGGGTCCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PALKERVSGGRQLRSGQTGCLEG*SWVPQA
Trigger: GGCCTGAGGGACCCAGCTCCATCCCTCCAGGCACCC...CGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGGCTGAGCCTGCAGTGGGTGGTGAGGGTGCCTaGAGGGATGGAGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: HGHILSCSLLPWKAEPAVGGEGA*RDGAGS
Trigger: GGACCCAGCTCCATCCCTCCAGGCACCCTCACCACC...CACTGCAGGCTCAGCCTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GTGCTGGGTTTCACCTCCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGGTGGTGAGGGTGCCTaGAGGGATGGAGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: VLGFTSCSKREGVRWKAAGGEGA*RDGAGS
Trigger: GGACCCAGCTCCATCCCTCCAGGCACCCTCACCACC...AGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCTATCCGCCCACGGAAAAGATaGCCACGGAGAGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GILAAMSPAVSLVKSAPIRPRKR*PRRGPR
Trigger: TCTGGGCCCTCTCCGTGGCCATCTTTTCCGTGGGCG...GATAGGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp GTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGACGCGCCCACGGAAAAGATaGCCACGGAGAGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VHQTDPKTHGLWLEESLTRPRKR*PRRGPR
Trigger: TCTGGGCCCTCTCCGTGGCCATCTTTTCCGTGGGCG...CGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GAAGCCAAAGATGGCCACAATGGAGACGTAGCTCATGGCTGGAACTCGCTCCAGATCAGGGGCTGCCGGTaGGTACGGCTGCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: EAKDGHNGDVAHGWNSLQIRGCR*VRLPRS
Trigger: GCTCCTGGGCAGCCGTACCCACCGGCAGCCCCTGAT...CTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR CCA 90 bp TCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGTCCGGATCAGGGGCTGCCGGTaGGTACGGCTGCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SKREGVRWKAAEIWSNVRIRGCR*VRLPRS
Trigger: GCTCCTGGGCAGCCGTACCCACCGGCAGCCCCTGAT...CCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp TCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCCACCAGCTCCTATGGTaGCATAGGCAGGCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: SFSLQGSRENSLRQARWLHQLLW*HRQAGL
Trigger: TAGGCCAGCCTGCCTATGCCACCATAGGAGCTGGTG...GAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CGGGGTAGAGCCCCAAGCCTAGAGGCGGGAGCCTGCCGTCCTTCCATCTTGCCACCACGAAGCCAAAGATaGCCACAATGGAGACGTAGC +
Preference number: 4 (lower is better)
Translates to: RGRAPSLEAGACRPSILPPRSQR*PQWRRS
Trigger: GCTACGTCTCCATTGTGGCCATCTTTGGCTTCGTGG...TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAGGCTTGGGGCTCTACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTGCCGGGCGGGGTCCCTaGCTGAAGAGCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: PHSLRNILETHANDEVARAGRGP*LKSSAT
Trigger: CGTGGCCGAGCTCTTCAGCCAGGGACCCCGCCCGGC...ACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGAACCAGCCACAGCCATaGCTGCCGGGCGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: PALKERVSGGRQLRSGQTNQPQP*LPGGVP
Trigger: AGGGACCCCGCCCGGCAGCCATGGCTGTGGCTGGTT...CGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CCCTGGAAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTAGAGAGGGTGTCCGGTaGAAGGCAGCTGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: PWKAEPAVREVSPFPCRGREGVR*KAAEIW
Trigger: CCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCT...ACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GGCTCTCCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTTCTCCCACCCCTGCCTaGCCCCTCAGTCGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GSPTPAWPLSRSHLALNTSPTPA*PLSRSH
Trigger: ATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGA...AGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp TCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTAGAGGCGCACTGCACTCGAGCCTaGGCGACAGAGCGAGACTGT +
Preference number: 4 (lower is better)
Translates to: SFLAALGNHRGRAPSLEAHCTRA*ATERDC
Trigger: ACAGTCTCGCTCTGTCGCCCAGGCTCGAGTGCAGTG...CGCCTCTAGGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp GGCTCTCCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCCGCCAGGACATTGTTaGCCAGCATGGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GSPTPAWPLSRSHLALNTPPGHC*PAWPFS
Trigger: GGAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGG...AGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR TCA 90 bp AGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCGCCAGGACATTGTTaGCCAGCATGGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RAWHPCCHVSSCVPGEECPPGHC*PAWPFS
Trigger: GGAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGG...GCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp TTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGAGGGCGCCCCGCAGGTaGGTGGGAGCAATCTCCCCC +
Preference number: 4 (lower is better)
Translates to: FHLATHGHILSCSLLPWKRAPRR*VGAISP
Trigger: GGGGGAGATTGCTCCCACTCACCTGCGGGGCGCCCT...CTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp GGCCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGGGCAGGTAGCACTGTaGGGCCCAGGAGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: GPIASATYWKPMPMMKLLGQVAL*GPGAVA
Trigger: GGCCACTGCTCCTGGGCCTCACAGTGCTACCTGCCC...GAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR TCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGGGGCAGGTAGCACTGTaGGGCCCAGGAGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: CPESAWQEFSESPRLWEEGQVAL*GPGAVA
Trigger: GGCCACTGCTCCTGGGCCTCACAGTGCTACCTGCCC...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp CCCCTTTGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGCAGCACGACCGCAATaGTCAGGGGCTGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: PLCPESAWQEFSESPRLWAARPQ*SGAAGG
Trigger: CCCACCGGCAGCCCCTGATCATTGCGGTCGTGCTGC...CCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCAAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp GCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAGCAGCACGACCGCAATaGTCAGGGGCTGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: APFLALILWSRWSTKLTQAARPQ*SGAAGG
Trigger: CCCACCGGCAGCCCCTGATCATTGCGGTCGTGCTGC...TTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp CCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTTGCCCTGGAAGGCTaGGCCTGCAGTGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PTPAWPLSRSHLALNTQVLALEG*ACSEGG
Trigger: ACCTCCCTCACTGCAGGCTCAGCCTTCCAGGGCAAG...AACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR TCA 90 bp GAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAAGCATCCAGAAGATTCTaGGGCCTTGAGCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: EGRGRGEWPTLMATAKPQASRRF*GLELRQ
Trigger: CTGCCTCAGCTCAAGGCCTCAGAATCTTCTGGATGC...TTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp AGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAGGTCCCTCAGGCCCCTaGCTCCCCAGCCACGTCTCA +
Preference number: 4 (lower is better)
Translates to: SSLPCFDSVEQVVHQTDPGPSGP*LPSHVS
Trigger: TGAGACGTGGCTGGGGAGGCAGGGGCCTGAGGGACC...TGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGGGTCCCTCAGGCCCCTaGCTCCCCAGCCACGTCTCA +
Preference number: 4 (lower is better)
Translates to: CPESAWQEFSESPRLWEEGPSGP*LPSHVS
Trigger: TGAGACGTGGCTGGGGAGGCAGGGGCCTGAGGGACC...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCGGAAGGAGGAAATCATaGCGCCCACGGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: AEERKGSLGRVERAGSPTGRRKS*RPRKRW
Trigger: CCATCTTTTCCGTGGGCGGCATGATTTCCTCCTTCC...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR GCA 90 bp CTCCACCAACAACACCGAGACCAAGGTGAAGACTGTGTTGACCACACCAGCTCCGCCACAGGCTGGCAGTaGCCAGGAGGGACTCCAAGC +
Preference number: 4 (lower is better)
Translates to: LHQQHRDQGEDCVDHTSSATGWQ*PGGTPS
Trigger: GCTTGGAGTCCCTCCTGGGCACTGCCAGCCTGTGGC...GGAGCTGGTGTGGTCAACACAGTCTTCACCTTGGTCTCGGTGTTGTTGGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR GCA 90 bp TCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTAGAGGCGAGGCTGGCCTACCCCTaGTGTCTCGAAGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: SFLAALGNHRGRAPSLEARLAYP*CLEDAG
Trigger: ACCAGCATCTTCGAGACAGCAGGGGTAGGCCAGCCT...CGCCTCTAGGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp CATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGGCTGAGCCTGCAGTGAGGGGAATGAGGGGGTaGTCAGACCACCCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: HGHILSCSLLPWKAEPAVRGMRG*SDHPSP
Trigger: GGGGGAAGGGTGGTCTGAGCACCCCCTCATTCCCCT...CACTGCAGGCTCAGCCTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCGCCGTCCTTCCATCTTaGCACACATGGGCACATACT +
Preference number: 4 (lower is better)
Translates to: AEERKGSLGRVERAGSPTAVLPS*HTWAHT
Trigger: AGTATGTGCCCATGTGTGGCAAGATGGAAGGACGGC...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp TTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTCGAGGGCGGGCCCGATaGGACCCACAGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: LILWSRWSTKLTQRPMVCRGRAR*DPQPQA
Trigger: GGCTTGTGGCTGTGGGTCCCATCGGGCCCGCCCTCG...ACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571308.5
ENST00000671706.1
CDS-3UTR CCA 90 bp CCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTTCTCTGACTCCGGCCTaGAGCGCAGAACCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: PTPAWPLSRSHLALNTQVSLTPA*SAEPAE
Trigger: CTCCGCAGGTTCTGCGCTCCAGGCCGGAGTCAGAGA...AACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GAGTGCCCCTATCATGGGTTTCACTGCCCATCTGTGACATGGGCTGACACCTCCTCTCTGACTCCGGCCTaGAGCGCAGAACCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: ECPYHGFHCPSVTWADTSSLTPA*SAEPAE
Trigger: CTCCGCAGGTTCTGCGCTCCAGGCCGGAGTCAGAGA...GGAGGTGTCAGCCCATGTCACAGATGGGCAGTGAAACCCATGATAGGGGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp TCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCGGGTGCCTGGAGGGATaGAGCTGGGTCCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SAPFLALILWSRWSTKLTGCLEG*SWVPQA
Trigger: GGCCTGAGGGACCCAGCTCCATCCCTCCAGGCACCC...GGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAGGGTGCCTGGAGGGATaGAGCTGGGTCCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: APFLALILWSRWSTKLTQGCLEG*SWVPQA
Trigger: GGCCTGAGGGACCCAGCTCCATCCCTCCAGGCACCC...TTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp CCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCGCCCACGGAAAAGATaGCCACGGAGAGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PTPAWPLSRSHLALNTQVRPRKR*PRRGPR
Trigger: TCTGGGCCCTCTCCGTGGCCATCTTTTCCGTGGGCG...AACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp AGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCTCTCCCCCACGTACATaGGCACCAGCCCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: RAWHPCCHVSSCVPGEECSPPRT*APALMS
Trigger: TGACATCAGGGCTGGTGCCCATGTACGTGGGGGAGA...GCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp GCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAATCAGGGGCTGCCGGTaGGTACGGCTGCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: APFLALILWSRWSTKLTQIRGCR*VRLPRS
Trigger: GCTCCTGGGCAGCCGTACCCACCGGCAGCCCCTGAT...TTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCATCAGGGGCTGCCGGTaGGTACGGCTGCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SAPFLALILWSRWSTKLTIRGCR*VRLPRS
Trigger: GCTCCTGGGCAGCCGTACCCACCGGCAGCCCCTGAT...GGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GTCCTTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGATCAGGGGCTGCCGGTaGGTACGGCTGCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VLPSCHTWAHTFLFPLALIRGCR*VRLPRS
Trigger: GCTCCTGGGCAGCCGTACCCACCGGCAGCCCCTGAT...CAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp AGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCCACACCAGCTCCTATaGTGGCATAGGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: REVSPFPCRGQERTPFARPHQLL*WHRQAG
Trigger: GCCAGCCTGCCTATGCCACCATAGGAGCTGGTGTGG...CCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCCACACCAGCTCCTATaGTGGCATAGGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: QVVHQTDPKTHGLWLEESPHQLL*WHRQAG
Trigger: GCCAGCCTGCCTATGCCACCATAGGAGCTGGTGTGG...GGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGACGCCACACCAGCTCCTATaGTGGCATAGGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VHQTDPKTHGLWLEESLTPHQLL*WHRQAG
Trigger: GCCAGCCTGCCTATGCCACCATAGGAGCTGGTGTGG...CGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TGTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCAAAGATGGCCACAATaGAGACGTAGCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: CGAVGRAWHPCCHVSSCVQRWPQ*RRSSWL
Trigger: CAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTG...GACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGGCCGGGCGGGGTCCCTaGCTGAAGAGCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGAGRGP*LKSSAT
Trigger: CGTGGCCGAGCTCTTCAGCCAGGGACCCCGCCCGGC...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GTCCTTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGAACCAGCCACAGCCATaGCTGCCGGGCGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: VLPSCHTWAHTFLFPLALNQPQP*LPGGVP
Trigger: AGGGACCCCGCCCGGCAGCCATGGCTGTGGCTGGTT...CAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCAGTTGCTCGTCCAGTTaGAGAAACCAGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: AEERKGSLGRVERAGSPTSCSSS*RNQPQP
Trigger: TGGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACT...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CTCCACCAACAACACCGAGACCAAGGTGAAGACTGTGTTGACCACACCAGCTCCCCGGGTAGAGAGAGCTaGCTCTCCCACCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LHQQHRDQGEDCVDHTSSPGRES*LSHPCL
Trigger: CAGGCAGGGGTGGGAGAGCCAGCTCTCTCTACCCGG...GGAGCTGGTGTGGTCAACACAGTCTTCACCTTGGTCTCGGTGTTGTTGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR CCA 90 bp TCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGTCCGGAGAGGGAGGGGAGAGTaGCCCACCCTGATGGCCACG +
Preference number: 4 (lower is better)
Translates to: SKREGVRWKAAEIWSNVRRGRGE*PTLMAT
Trigger: CGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCT...CCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CTCCACCAACAACACCGAGACCAAGGTGAAGACTGTGTTGACCACACCAGCTCCAGAGGGAGGGGAGAGTaGCCCACCCTGATGGCCACG +
Preference number: 4 (lower is better)
Translates to: LHQQHRDQGEDCVDHTSSRGRGE*PTLMAT
Trigger: CGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCT...GGAGCTGGTGTGGTCAACACAGTCTTCACCTTGGTCTCGGTGTTGTTGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR CCA 90 bp CACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCGGCCAGGAGTGGGGGTaGGGGCCCACGGAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: HWCVSDTSVTIQSRSAPFGQEWG*GPTESL
Trigger: GAGGCTCTCCGTGGGCCCCCACCCCCACTCCTGGCC...GAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR CCA 90 bp CAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGACGGGGAAGTGTGATGCCCACCTCTaGCCTACGGTGTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: QTDPKTHGLWLEESLTGKCDAHL*PTVWEA
Trigger: AGCCTCCCACACCGTAGGCCAGAGGTGGGCATCACA...CTTCCCCGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp GTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCGATCCTGGAGTCTCTaGCTCCGGCCTGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: VSSLPCFDSVEQVVHQTDRSWSL*LRPGAQ
Trigger: CTGCGCTCCAGGCCGGAGTCAGAGACTCCAGGATCG...GTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571308.5
ENST00000671706.1
CDS-3UTR TCA 90 bp GTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGACGCAGGGGCGGCGAAGATaGAAGAACCGATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: VHQTDPKTHGLWLEESLTQGRRR*KNRSWS
Trigger: ACTCCAGGATCGGTTCTTTCATCTTCGCCGCCCCTG...CGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571308.5
ENST00000671706.1
CDS-3UTR TCA 90 bp AGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCAGGGGCGGCGAAGATaGAAGAACCGATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: REVSPFPCRGQERTPFARQGRRR*KNRSWS
Trigger: ACTCCAGGATCGGTTCTTTCATCTTCGCCGCCCCTG...CCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp GTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGACGCCGCCAGGACATTGTTaGCCAGCATGGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: VHQTDPKTHGLWLEESLTPPGHC*PAWPFS
Trigger: GGAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGG...CGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp CACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCAGGGCGCCCCGCAGGTaGGTGGGAGCAATCTCCCCC +
Preference number: 4 (lower is better)
Translates to: HWCVSDTSVTIQSRSAPFRAPRR*VGAISP
Trigger: GGGGGAGATTGCTCCCACTCACCTGCGGGGCGCCCT...GAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp TCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAAGGGCAGGTAGCACTGTaGGGCCCAGGAGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRSAPFLALILWSRWSTKGQVAL*GPGAVA
Trigger: GGCCACTGCTCCTGGGCCTCACAGTGCTACCTGCCC...TTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp CCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTGCAGCACGACCGCAATaGTCAGGGGCTGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: PHSLRNILETHANDEVARAARPQ*SGAAGG
Trigger: CCCACCGGCAGCCCCTGATCATTGCGGTCGTGCTGC...ACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR TCA 90 bp TCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGGCAGCACGACCGCAATaGTCAGGGGCTGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: SLPCFDSVEQVVHQTDPKAARPQ*SGAAGG
Trigger: CCCACCGGCAGCCCCTGATCATTGCGGTCGTGCTGC...CTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp CATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGGCTGAGCCTGCAGTGCCGGTGGAAGGCAGCTaGGATCTGGTCAAACGTCCG +
Preference number: 4 (lower is better)
Translates to: HGHILSCSLLPWKAEPAVPVEGS*DLVKRP
Trigger: CGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGG...CACTGCAGGCTCAGCCTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp GTCCTTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAGAGTGGCCCACCCTaGTGGCCACGGCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: VLPSCHTWAHTFLFPLALESGPP*WPRPNH
Trigger: GTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTC...CAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp AGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCAGGGAGGAAGAGGGGTaGAGAGTTATGGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: RAWHPCCHVSSCVPGEECREEEG*RVMVPV
Trigger: GACAGGGACCATAACTCTTCACCCCTCTTCCTCCCT...GCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp ATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCGGCTGGAGGAGTCCCTaGCGGGGAAGCAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: IQSRSAPFLALILWSRWSGWRSP*RGSRWA
Trigger: AGCCCACCTGCTTCCCCGTCAGGGACTCCTCCAGCC...GGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp GCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTGGTCCCGGAGTGACGTaGGAGGGCGGGCCCGATGGG +
Preference number: 4 (lower is better)
Translates to: AFQTPQLLSNLGQLPSLLGPGVT*EGGPDG
Trigger: CCCATCGGGCCCGCCCTCGCACGTCACTCCGGGACC...AAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571308.5
ENST00000671706.1
CDS-3UTR GCA 90 bp CTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCGGTCCCTCAGGCCCCTaGCTCCCCAGCCACGTCTCA +
Preference number: 4 (lower is better)
Translates to: LPCFDSVEQVVHQTDPKTGPSGP*LPSHVS
Trigger: TGAGACGTGGCTGGGGAGGCAGGGGCCTGAGGGACC...GGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp ATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCGGTCCCTCAGGCCCCTaGCTCCCCAGCCACGTCTCA +
Preference number: 4 (lower is better)
Translates to: IQSRSAPFLALILWSRWSGPSGP*LPSHVS
Trigger: TGAGACGTGGCTGGGGAGGCAGGGGCCTGAGGGACC...GGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp TTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGGGTCCCTCAGGCCCCTaGCTCCCCAGCCACGTCTCA +
Preference number: 4 (lower is better)
Translates to: FHLATHGHILSCSLLPWKGPSGP*LPSHVS
Trigger: TGAGACGTGGCTGGGGAGGCAGGGGCCTGAGGGACC...CTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAAGGAAGGAGGAAATCATaGCGCCCACGGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: EGRGRGEWPTLMATAKPQGRRKS*RPRKRW
Trigger: CCATCTTTTCCGTGGGCGGCATGATTTCCTCCTTCC...TTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR GCA 90 bp GCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCGCCACAGGCTGGCAGTaGCCAGGAGGGACTCCAAGC +
Preference number: 4 (lower is better)
Translates to: ALILWSRWSTKLTQRPMVATGWQ*PGGTPS
Trigger: GCTTGGAGTCCCTCCTGGGCACTGCCAGCCTGTGGC...GACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp AGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAGCCACAGGCTGGCAGTaGCCAGGAGGGACTCCAAGC +
Preference number: 4 (lower is better)
Translates to: SSLPCFDSVEQVVHQTDPATGWQ*PGGTPS
Trigger: GCTTGGAGTCCCTCCTGGGCACTGCCAGCCTGTGGC...TGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp CAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCGCCGGTGGGTACGGCTaGCCAGGAGCTGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QSFSSGPKYSSSVLGFTSAGGYG*PGAGAG
Trigger: CCCTGCTCCAGCTCCTGGGCAGCCGTACCCACCGGC...GGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp CCCCTTTGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGCAATGATCAGGGGCTaGCGGTGGGTACGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PLCPESAWQEFSESPRLWAMIRG*RWVRLP
Trigger: GGGCAGCCGTACCCACCGGCAGCCCCTGATCATTGC...CCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCAAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGAGCTGCTGGCTCAGCTaGAGCACGACCGCAATGATC +
Preference number: 4 (lower is better)
Translates to: VVHQTDPKTHGLWLEESLSCWLS*STTAMI
Trigger: GATCATTGCGGTCGTGCTGCAGCTGAGCCAGCAGCT...CAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACACTGGGTTTCACCTCCTaGTCTAAAAGAGAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTLGFTS*SKREGV
Trigger: GACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAG...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR GCA 90 bp GTGGGGCCGTGGGCAGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCAATACTCAAGTTCTGTaGTGGGTTTCACCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VGPWAGPGILAAMSPAVSNTQVL*WVSPPA
Trigger: AGCAGGAGGTGAAACCCAGCACAGAACTTGAGTATT...GGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGTGGCTCTCCCACCCCTaGCTGGCCCCTCAGTCGTTC +
Preference number: 4 (lower is better)
Translates to: CPESAWQEFSESPRLWEEWLSHP*LAPQSF
Trigger: GAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCCA...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACACCAATTCTACCAGGCTaGAGGGATTCTTTTCCACCC +
Preference number: 4 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTPILPG*RDSFPP
Trigger: GGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGG...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR GCA 90 bp GAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAAACCTGGGAGACAGCTTaGAGTGAAGCAAGATCACGC +
Preference number: 4 (lower is better)
Translates to: EGRGRGEWPTLMATAKPQTWETA*SEARSR
Trigger: GCGTGATCTTGCTTCACTGCAAGCTGTCTCCCAGGT...TTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp CCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCAGCCGTCCTTCCATCTTaGCACACATGGGCACATACT +
Preference number: 4 (lower is better)
Translates to: PFPCRGQERTPFARRGGSAVLPS*HTWAHT
Trigger: AGTATGTGCCCATGTGTGGCAAGATGGAAGGACGGC...TGAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAATCAAAAGCCTGTGGATaGAGCACCCTTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: EGRGRGEWPTLMATAKPQSKACG*STLPGR
Trigger: CCTTCCTGGAAGGGTGCTGCATCCACAGGCTTTTGA...TTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp TCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCGTCCCTGGTGAAGAGTaGCCCTATCATGGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: SFSLQGSRENSLRQARWLVPGEE*PYHGFH
Trigger: GTGAAACCCATGATAGGGGCACTCTTCACCAGGGAC...GAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp GTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGCTCGCAGAATCCACTTaGTGCCTGTGCCCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: VVHQTDPKTHGLWLEESLLAEST*CLCPER
Trigger: CCTTTCGGGGCACAGGCAGCAAGTGGATTCTGCGAG...CAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR CCA 90 bp AGCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGGGCTCCCGCGGATCTaGTGGAGCGGGGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SFPILPGCRDSFPPGNNRGLPRI*WSGAGG
Trigger: TCCCCCAGCCCCGCTCCACCAGATCCGCGGGAGCCC...CCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp GTCCTTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGGTGGTGAGGGTGCCTaGAGGGATGGAGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: VLPSCHTWAHTFLFPLALGGEGA*RDGAGS
Trigger: GGACCCAGCTCCATCCCTCCAGGCACCCTCACCACC...CAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCGGTGGTGAGGGTGCCTaGAGGGATGGAGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: ALILWSRWSTKLTQRPMVGGEGA*RDGAGS
Trigger: GGACCCAGCTCCATCCCTCCAGGCACCCTCACCACC...GACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGTCCGGCGCCCACGGAAAAGATaGCCACGGAGAGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SKREGVRWKAAEIWSNVRRPRKR*PRRGPR
Trigger: TCTGGGCCCTCTCCGTGGCCATCTTTTCCGTGGGCG...CCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp AAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGTCTCCCCCACGTACATaGGCACCAGCCCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: KAEPAVREVSPFPCRGQESPPRT*APALMS
Trigger: TGACATCAGGGCTGGTGCCCATGTACGTGGGGGAGA...CTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GTTAGGGCTCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCATAACAATGGCCAGTTaGTTGAGCGTCCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: VRAPSWQPWETIGVEPQAITMAS*LSVPRA
Trigger: CGCCCTGGGGACGCTCAACCAACTGGCCATTGTTAT...GGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp TCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTAGAGGCGTCCAAGCCCAGCACCTaGGCGATCAGAATGCCGATA +
Preference number: 4 (lower is better)
Translates to: SFLAALGNHRGRAPSLEASKPST*AIRMPI
Trigger: TATCGGCATTCTGATCGCCCAGGTGCTGGGCTTGGA...CGCCTCTAGGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp AGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCCACAGTCATCAGGATaGCACAGCCACACATGCCCG +
Preference number: 4 (lower is better)
Translates to: REVSPFPCRGQERTPFARPQSSG*HSHTCP
Trigger: CGGGCATGTGTGGCTGTGCCATCCTGATGACTGTGG...CCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GGCTCTCCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTTGGAGACGTAGCTCATaGCTGGAACTCGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GSPTPAWPLSRSHLALNTWRRSS*LELAPA
Trigger: TGCTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCA...AGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCCAAAGATGGCCACAATaGAGACGTAGCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: AEERKGSLGRVERAGSPTQRWPQ*RRSSWL
Trigger: CAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTG...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACCACGAAGCCAAAGATaGCCACAATGGAGACGTAGC +
Preference number: 4 (lower is better)
Translates to: EGRGRGEWPTLMATAKPQPRSQR*PQWRRS
Trigger: GCTACGTCTCCATTGTGGCCATCTTTGGCTTCGTGG...TTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp TCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCCCACGAAGCCAAAGATaGCCACAATGGAGACGTAGC +
Preference number: 4 (lower is better)
Translates to: SFSLQGSRENSLRQARWLPRSQR*PQWRRS
Trigger: GCTACGTCTCCATTGTGGCCATCTTTGGCTTCGTGG...GAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp TGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTGCCGGGCGGGGTCCCTaGCTGAAGAGCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: CVSDTSVTIQSRSAPFLAAGRGP*LKSSAT
Trigger: CGTGGCCGAGCTCTTCAGCCAGGGACCCCGCCCGGC...AGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCGCCGGGCGGGGTCCCTaGCTGAAGAGCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: YATGAFQTPQLLSNLGQLAGRGP*LKSSAT
Trigger: CGTGGCCGAGCTCTTCAGCCAGGGACCCCGCCCGGC...GAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp ATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCAACCAGCCACAGCCATaGCTGCCGGGCGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: IQSRSAPFLALILWSRWSNQPQP*LPGGVP
Trigger: AGGGACCCCGCCCGGCAGCCATGGCTGTGGCTGGTT...GGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGAACCAGCCACAGCCATaGCTGCCGGGCGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SLPCFDSVEQVVHQTDPKNQPQP*LPGGVP
Trigger: AGGGACCCCGCCCGGCAGCCATGGCTGTGGCTGGTT...CTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp CTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGAACCAGCCACAGCCATaGCTGCCGGGCGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: LALILWSRWSTKLTQRPMNQPQP*LPGGVP
Trigger: AGGGACCCCGCCCGGCAGCCATGGCTGTGGCTGGTT...CATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp AGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACAAGTTGCTCGTCCAGTTaGAGAAACCAGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: RKREGRVAHPDGHGQTTTSCSSS*RNQPQP
Trigger: TGGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACT...TGTTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GGCCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCCCGGGTAGAGAGAGCTaGCTCTCCCACCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GPIASATYWKPMPMMKLLPGRES*LSHPCL
Trigger: CAGGCAGGGGTGGGAGAGCCAGCTCTCTCTACCCGG...GAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GTCCTTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGAGAGGGAGGGGAGAGTaGCCCACCCTGATGGCCACG +
Preference number: 4 (lower is better)
Translates to: VLPSCHTWAHTFLFPLALRGRGE*PTLMAT
Trigger: CGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCT...CAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCGGGAGGAGTCCAAGGTaGTGGGAAACTGGATTTCTT +
Preference number: 4 (lower is better)
Translates to: AEERKGSLGRVERAGSPTGRSPR*WETGFL
Trigger: AAGAAATCCAGTTTCCCACCACCTTGGACTCCTCCC...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp TCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCGAAAGTCCCAGATTGTaGGAGGAGTCCAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SFSLQGSRENSLRQARWLESPRL*EESKVV
Trigger: CACCACCTTGGACTCCTCCCACAATCTGGGACTTTC...GAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGAAGACCCATGGTCTGTaGCTGGAGGAGTCCCTGACG +
Preference number: 4 (lower is better)
Translates to: EQVVHQTDPKTHGLWLEEKTHGL*LEESLT
Trigger: CGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTT...CTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp CTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGCGATCCTGGAGTCTCTaGCTCCGGCCTGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LALILWSRWSTKLTQRPMRSWSL*LRPGAQ
Trigger: CTGCGCTCCAGGCCGGAGTCAGAGACTCCAGGATCG...CATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571308.5
ENST00000671706.1
CDS-3UTR TCA 90 bp AGCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGAGGGCGCCCCGCAGGTaGGTGGGAGCAATCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SFPILPGCRDSFPPGNNRRAPRR*VGAISP
Trigger: GGGGGAGATTGCTCCCACTCACCTGCGGGGCGCCCT...CCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp GCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGCAATGGCCAGTTGGTTaGGCGTCCCCAGGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: ASQFYQAAGILFHPEIIGQWPVG*ASPGRP
Trigger: GGGGCGCCCTGGGGACGCTCAACCAACTGGCCATTG...CCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGCAATGGCCAGTTGGTTaGGCGTCCCCAGGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGQWPVG*ASPGRP
Trigger: GGGGCGCCCTGGGGACGCTCAACCAACTGGCCATTG...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp CACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCAATGGCCAGTTGGTTaGGCGTCCCCAGGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: HWCVSDTSVTIQSRSAPFQWPVG*ASPGRP
Trigger: GGGGCGCCCTGGGGACGCTCAACCAACTGGCCATTG...GAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp GCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGGGGCAGGTAGCACTGTaGGGCCCAGGAGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: ASQFYQAAGILFHPEIIGGQVAL*GPGAVA
Trigger: GGCCACTGCTCCTGGGCCTCACAGTGCTACCTGCCC...CCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR TCA 90 bp CTCCACCAACAACACCGAGACCAAGGTGAAGACTGTGTTGACCACACCAGCTCCCCGGTGGAAGGCAGCTaGGATCTGGTCAAACGTCCG +
Preference number: 4 (lower is better)
Translates to: LHQQHRDQGEDCVDHTSSPVEGS*DLVKRP
Trigger: CGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGG...GGAGCTGGTGTGGTCAACACAGTCTTCACCTTGGTCTCGGTGTTGTTGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR TCA 90 bp AAAGATGGCCACAATGGAGACGTAGCTCATGGCTGGAACTCGCTCCAGCAGGAGCCGGTGGAAGGCAGCTaGGATCTGGTCAAACGTCCG +
Preference number: 4 (lower is better)
Translates to: KDGHNGDVAHGWNSLQQEPVEGS*DLVKRP
Trigger: CGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGG...CTCCTGCTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCATTGTGGCCATCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR TCA 90 bp TCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGTCCGGGGCAGGAGAATGGCGTaGACCTGGGAGACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SKREGVRWKAAEIWSNVRGRRMA*TWETAC
Trigger: GCAAGCTGTCTCCCAGGTTCACGCCATTCTCCTGCC...CCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR TCA 90 bp GGCCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCCTTGCCCTGGAAGGCTaGGCCTGCAGTGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GPIASATYWKPMPMMKLLLALEG*ACSEGG
Trigger: ACCTCCCTCACTGCAGGCTCAGCCTTCCAGGGCAAG...GAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR TCA 90 bp GGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCTATCAGGGAGGAAGAGGGGTaGAGAGTTATGGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: GILAAMSPAVSLVKSAPIREEEG*RVMVPV
Trigger: GACAGGGACCATAACTCTTCACCCCTCTTCCTCCCT...GATAGGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp GGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCTATCAAGATTCTGAGGCCTTaGGCTGAGGCAGGACAGAGG +
Preference number: 4 (lower is better)
Translates to: GILAAMSPAVSLVKSAPIKILRP*AEAGQR
Trigger: CCTCTGTCCTGCCTCAGCTCAAGGCCTCAGAATCTT...GATAGGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp GGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCTATCGCATCCAGAAGATTCTaGGGCCTTGAGCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GILAAMSPAVSLVKSAPIASRRF*GLELRQ
Trigger: CTGCCTCAGCTCAAGGCCTCAGAATCTTCTGGATGC...GATAGGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp AGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGATCTGTGACATGGGCTaGCACCTCCCTCACAGAGTG +
Preference number: 4 (lower is better)
Translates to: REVSPFPCRGQERTPFARICDMG*HLPHRV
Trigger: CACTCTGTGAGGGAGGTGTCAGCCCATGTCACAGAT...CCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp GCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAGGTGGGCTAGCTGTGTaGTGCCCACCTCTGGCCTAC +
Preference number: 4 (lower is better)
Translates to: APFLALILWSRWSTKLTQGGLAV*CPPLAY
Trigger: GTAGGCCAGAGGTGGGCATCACACAGCTAGCCCACC...TTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp TCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCGGTGGGCTAGCTGTGTaGTGCCCACCTCTGGCCTAC +
Preference number: 4 (lower is better)
Translates to: SAPFLALILWSRWSTKLTGGLAV*CPPLAY
Trigger: GTAGGCCAGAGGTGGGCATCACACAGCTAGCCCACC...GGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp GTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGGGTGGTCCACCAAACTaGCCCAAAGACCCATGGTCT +
Preference number: 4 (lower is better)
Translates to: VVHQTDPKTHGLWLEESLGGPPN*PKDPWS
Trigger: AGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACC...CAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp CTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCGCCACAGGCTGGCAGTaGCCAGGAGGGACTCCAAGC +
Preference number: 4 (lower is better)
Translates to: LPCFDSVEQVVHQTDPKTATGWQ*PGGTPS
Trigger: GCTTGGAGTCCCTCCTGGGCACTGCCAGCCTGTGGC...GGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp TGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCCGGTGGGTACGGCTaGCCAGGAGCTGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: WCVSDTSVTIQSRSAPFLAGGYG*PGAGAG
Trigger: CCCTGCTCCAGCTCCTGGGCAGCCGTACCCACCGGC...AAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp TATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCGCCGGTGGGTACGGCTaGCCAGGAGCTGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: YATGAFQTPQLLSNLGQLAGGYG*PGAGAG
Trigger: CCCTGCTCCAGCTCCTGGGCAGCCGTACCCACCGGC...GAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp TTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGCAATGATCAGGGGCTaGCGGTGGGTACGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LILWSRWSTKLTQRPMVCAMIRG*RWVRLP
Trigger: GGGCAGCCGTACCCACCGGCAGCCCCTGATCATTGC...ACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp CCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTAGCTGCTGGCTCAGCTaGAGCACGACCGCAATGATC +
Preference number: 4 (lower is better)
Translates to: PTPAWPLSRSHLALNTQVSCWLS*STTAMI
Trigger: GATCATTGCGGTCGTGCTGCAGCTGAGCCAGCAGCT...AACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp CCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTAGGCTGGCCTACCCCTaGTGTCTCGAAGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: PTPAWPLSRSHLALNTQVRLAYP*CLEDAG
Trigger: ACCAGCATCTTCGAGACAGCAGGGGTAGGCCAGCCT...AACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp GAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACTGGGTTTCACCTCCTaGTCTAAAAGAGAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: EGRGRGEWPTLMATAKPQLGFTS*SKREGV
Trigger: GACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAG...TTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR GCA 90 bp GGCCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCAGGGGAATGAGGGGGTaGTCAGACCACCCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: GPIASATYWKPMPMMKLLRGMRG*SDHPSP
Trigger: GGGGGAAGGGTGGTCTGAGCACCCCCTCATTCCCCT...GAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp TCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTAGAGGCGACCTGGGAGACAGCTTaGAGTGAAGCAAGATCACGC +
Preference number: 4 (lower is better)
Translates to: SFLAALGNHRGRAPSLEATWETA*SEARSR
Trigger: GCGTGATCTTGCTTCACTGCAAGCTGTCTCCCAGGT...CGCCTCTAGGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp AAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGTTTCCTGTTCCCTCTTaGCCTGGAAGGCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: KAEPAVREVSPFPCRGQEFPVPS*PGRLSL
Trigger: CAGGCTCAGCCTTCCAGGGCAAGAGGGAACAGGAAA...CTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCGGGTGCCTGGAGGGATaGAGCTGGGTCCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: HWCVSDTSVTIQSRSAPFGCLEG*SWVPQA
Trigger: GGCCTGAGGGACCCAGCTCCATCCCTCCAGGCACCC...GAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp CTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCGCCCCGCAGGTGAGTaGGAGCAATCTCCCCCACGT +
Preference number: 4 (lower is better)
Translates to: LPCFDSVEQVVHQTDPKTRPAGE*EQSPPR
Trigger: ACGTGGGGGAGATTGCTCCCACTCACCTGCGGGGCG...GGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCCGCCCCGCAGGTGAGTaGGAGCAATCTCCCCCACGT +
Preference number: 4 (lower is better)
Translates to: FLALILWSRWSTKLTQRPRPAGE*EQSPPR
Trigger: ACGTGGGGGAGATTGCTCCCACTCACCTGCGGGGCG...GGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGCGCCCCGCAGGTGAGTaGGAGCAATCTCCCCCACGT +
Preference number: 4 (lower is better)
Translates to: SLPCFDSVEQVVHQTDPKRPAGE*EQSPPR
Trigger: ACGTGGGGGAGATTGCTCCCACTCACCTGCGGGGCG...CTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp AGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGATAACAATGGCCAGTTaGTTGAGCGTCCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: REVSPFPCRGQERTPFARITMAS*LSVPRA
Trigger: CGCCCTGGGGACGCTCAACCAACTGGCCATTGTTAT...CCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp AAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGTCCAAGCCCAGCACCTaGGCGATCAGAATGCCGATA +
Preference number: 4 (lower is better)
Translates to: KAEPAVREVSPFPCRGQESKPST*AIRMPI
Trigger: TATCGGCATTCTGATCGCCCAGGTGCTGGGCTTGGA...CTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GGCTCTCCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTGCTTCAGACTCTTTCTaGCAGGCCCCTCGAGATTCT +
Preference number: 4 (lower is better)
Translates to: GSPTPAWPLSRSHLALNTASDSF*QAPRDS
Trigger: AGAATCTCGAGGGGCCTGCCAGAAAGAGTCTGAAGC...AGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGCTGGAGCAGGGACAGTaGCCGCTCACGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: CPESAWQEFSESPRLWEELEQGQ*PLTLQL
Trigger: AAGCTGGAGCGTGAGCGGCCACTGTCCCTGCTCCAG...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAACTGGAGCAGGGACAGTaGCCGCTCACGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: APFLALILWSRWSTKLTQLEQGQ*PLTLQL
Trigger: AAGCTGGAGCGTGAGCGGCCACTGTCCCTGCTCCAG...TTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGATCAGGGGCTGCCGGTaGGTACGGCTGCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGIRGCR*VRLPRS
Trigger: GCTCCTGGGCAGCCGTACCCACCGGCAGCCCCTGAT...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GAAGCCAAAGATGGCCACAATGGAGACGTAGCTCATGGCTGGAACTCGCTCCAGCCACACCAGCTCCTATaGTGGCATAGGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: EAKDGHNGDVAHGWNSLQPHQLL*WHRQAG
Trigger: GCCAGCCTGCCTATGCCACCATAGGAGCTGGTGTGG...CTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR CCA 90 bp CCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGCCACACCAGCTCCTATaGTGGCATAGGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PALKERVSGGRQLRSGQTPHQLL*WHRQAG
Trigger: GCCAGCCTGCCTATGCCACCATAGGAGCTGGTGTGG...CGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCCACAGTCATCAGGATaGCACAGCCACACATGCCCG +
Preference number: 4 (lower is better)
Translates to: PTPAWPLSRSHLALNTQVPQSSG*HSHTCP
Trigger: CGGGCATGTGTGGCTGTGCCATCCTGATGACTGTGG...AACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp AGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGTGGAGACGTAGCTCATaGCTGGAACTCGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: REVSPFPCRGQERTPFARWRRSS*LELAPA
Trigger: TGCTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCA...CCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGACGGGGAAGTGGAGACGTAGCTCATaGCTGGAACTCGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QTDPKTHGLWLEESLTGKWRRSS*LELAPA
Trigger: TGCTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCA...CTTCCCCGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTGGAGACGTAGCTCATaGCTGGAACTCGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: EQVVHQTDPKTHGLWLEEWRRSS*LELAPA
Trigger: TGCTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCA...CTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGAACCAGCCACAGCCATaGCTGCCGGGCGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGNQPQP*LPGGVP
Trigger: AGGGACCCCGCCCGGCAGCCATGGCTGTGGCTGGTT...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCATCCTGCTCTCTGCTCTaGTTTGTCCCACTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: PFPCRGQERTPFARRGGSSCSLL*FVPLRK
Trigger: CTTTCTCAGTGGGACAAACCAGAGCAGAGAGCAGGA...TGAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAAAGGTGGTGGGAAACTaGATTTCTTGTCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTKVVGN*ISCLLS
Trigger: GGACAGGAGACAAGAAATCCAGTTTCCCACCACCTT...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CCCTGGAAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTGGGAGGAGTCCAAGGTaGTGGGAAACTGGATTTCTT +
Preference number: 4 (lower is better)
Translates to: PWKAEPAVREVSPFPCRGGRSPR*WETGFL
Trigger: AAGAAATCCAGTTTCCCACCACCTTGGACTCCTCCC...ACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCCCATCTTGCCACACATaGGCACATACTTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: AEERKGSLGRVERAGSPTPSCHT*AHTFLF
Trigger: GAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGG...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCTATCCCTTCTTGGCAGCCTTaGGAAACCATCGGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: GILAAMSPAVSLVKSAPIPSWQP*ETIGVE
Trigger: CTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGG...GATAGGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp TTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGGCCGTGGGCAGGGCCTaGCATCCTTGCTGCCATGTC +
Preference number: 4 (lower is better)
Translates to: FHLATHGHILSCSLLPWKAVGRA*HPCCHV
Trigger: GACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGC...CTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp GGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGGGCCAGGAGTGGGGGTaGGGGCCCACGGAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: GKLCHWCVSDTSVTIQSRGQEWG*GPTESL
Trigger: GAGGCTCTCCGTGGGCCCCCACCCCCACTCCTGGCC...CCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR CCA 90 bp AGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAGAAAGTTCAGCGTCCTaGAGGGCGGCCAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SSLPCFDSVEQVVHQTDPESSAS*RAARSG
Trigger: CCCACTCCTGGCCGCCCTCCAGGACGCTGAACTTTC...TGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
3UTR CAA 72 bp TGGAAACCCATGCCAATGATGAAGTTGCTCGTCCAGTaGGAGAAACCAGCCACAGCCATGGCTGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: WKPMPMMKLLVQ*EKPATAMAAGR
Trigger: CCGCCCGGCAGCCATGGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACTTCATCATTGGCATGGGTTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR TCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGCGATCCTGGAGTCTCTaGCTCCGGCCTGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGRSWSL*LRPGAQ
Trigger: CTGCGCTCCAGGCCGGAGTCAGAGACTCCAGGATCG...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR TCA 90 bp AGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTCCAGTTCGATCCTGGAGTCTCTaGCTCCGGCCTGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SLRNILETHANDEVARPVRSWSL*LRPGAQ
Trigger: CTGCGCTCCAGGCCGGAGTCAGAGACTCCAGGATCG...AACTGGACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR TCA 90 bp TCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTAGAGGCGGGAATCGTCCAAGGATaGGCATTTCATAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SFLAALGNHRGRAPSLEAGIVQG*AFHRRQ
Trigger: CTGCCTCCTATGAAATGCTCATCCTTGGACGATTCC...CGCCTCTAGGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp AGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGAGGGCGCCCCGCAGGTaGGTGGGAGCAATCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SYATGAFQTPQLLSNLGQRAPRR*VGAISP
Trigger: GGGGGAGATTGCTCCCACTCACCTGCGGGGCGCCCT...CTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp GCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTCAATGGCCAGTTGGTTaGGCGTCCCCAGGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: AFQTPQLLSNLGQLPSLLQWPVG*ASPGRP
Trigger: GGGGCGCCCTGGGGACGCTCAACCAACTGGCCATTG...AAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp AGCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGCAGCACGACCGCAATaGTCAGGGGCTGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: SFPILPGCRDSFPPGNNRAARPQ*SGAAGG
Trigger: CCCACCGGCAGCCCCTGATCATTGCGGTCGTGCTGC...CCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR TCA 90 bp GCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGGAGAGTGGCCCACCCTaGTGGCCACGGCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: ASQFYQAAGILFHPEIIGESGPP*WPRPNH
Trigger: GTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTC...CCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR TCA 90 bp GCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCGTGGCAAGAATTCAGTaGAAGTCCCAGATTGTGGGA +
Preference number: 4 (lower is better)
Translates to: AWHPCCHVSSCVPGEECPVARIQ*KSQIVG
Trigger: TCCCACAATCTGGGACTTTCACTGAATTCTTGCCAC...GGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp GTCCTTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGGCAGGAGAATGGCGTaGACCTGGGAGACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: VLPSCHTWAHTFLFPLALGRRMA*TWETAC
Trigger: GCAAGCTGTCTCCCAGGTTCACGCCATTCTCCTGCC...CAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp TTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGTGGGCTAGCTGTGTaGTGCCCACCTCTGGCCTAC +
Preference number: 4 (lower is better)
Translates to: LILWSRWSTKLTQRPMVCGGLAV*CPPLAY
Trigger: GTAGGCCAGAGGTGGGCATCACACAGCTAGCCCACC...ACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp GCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTGGCTGGAGGAGTCCCTaGCGGGGAAGCAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: AFQTPQLLSNLGQLPSLLGWRSP*RGSRWA
Trigger: AGCCCACCTGCTTCCCCGTCAGGGACTCCTCCAGCC...AAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp CAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGACGGGGAAGCTCCCTTCCTTGCTTTaGTTCTGTGGAGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: QTDPKTHGLWLEESLTGKLPSLL*FCGAGG
Trigger: ACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAG...CTTCCCCGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp GTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTGGTCCCGGAGTGACGTaGGAGGGCGGGCCCGATGGG +
Preference number: 4 (lower is better)
Translates to: VSYATGAFQTPQLLSNLGGPGVT*EGGPDG
Trigger: CCCATCGGGCCCGCCCTCGCACGTCACTCCGGGACC...ACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571308.5
ENST00000671706.1
CDS-3UTR GCA 90 bp ATTCTGCAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCGGTCCCTCAGGCCCCTaGCTCCCCAGCCACGTCTCA +
Preference number: 4 (lower is better)
Translates to: ILQMPRAMPGTGSYNLLSGPSGP*LPSHVS
Trigger: TGAGACGTGGCTGGGGAGGCAGGGGCCTGAGGGACC...GCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTGCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp AGCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGGTCCCTCAGGCCCCTaGCTCCCCAGCCACGTCTCA +
Preference number: 4 (lower is better)
Translates to: SFPILPGCRDSFPPGNNRGPSGP*LPSHVS
Trigger: TGAGACGTGGCTGGGGAGGCAGGGGCCTGAGGGACC...CCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR GCA 90 bp AAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGGGAAGGAGGAAATCATaGCGCCCACGGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: KAEPAVREVSPFPCRGQEGRRKS*RPRKRW
Trigger: CCATCTTTTCCGTGGGCGGCATGATTTCCTCCTTCC...CTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGGCCACAGGCTGGCAGTaGCCAGGAGGGACTCCAAGC +
Preference number: 4 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGATGWQ*PGGTPS
Trigger: GCTTGGAGTCCCTCCTGGGCACTGCCAGCCTGTGGC...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR GCA 90 bp CAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCATTTACGCCGGTGGGTACGGCTaGCCAGGAGCTGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QMPRAMPGTGSYNLLSIYAGGYG*PGAGAG
Trigger: CCCTGCTCCAGCTCCTGGGCAGCCGTACCCACCGGC...GTAAATGCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp GCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGGCAATGATCAGGGGCTaGCGGTGGGTACGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ASQFYQAAGILFHPEIIGAMIRG*RWVRLP
Trigger: GGGCAGCCGTACCCACCGGCAGCCCCTGATCATTGC...CCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR GCA 90 bp TCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGTCCGGAGCTGCTGGCTCAGCTaGAGCACGACCGCAATGATC +
Preference number: 4 (lower is better)
Translates to: SKREGVRWKAAEIWSNVRSCWLS*STTAMI
Trigger: GATCATTGCGGTCGTGCTGCAGCTGAGCCAGCAGCT...CCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp AAAGATGGCCACAATGGAGACGTAGCTCATGGCTGGAACTCGCTCCAGCAGGAGAGCTGCTGGCTCAGCTaGAGCACGACCGCAATGATC +
Preference number: 4 (lower is better)
Translates to: KDGHNGDVAHGWNSLQQESCWLS*STTAMI
Trigger: GATCATTGCGGTCGTGCTGCAGCTGAGCCAGCAGCT...CTCCTGCTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCATTGTGGCCATCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR GCA 90 bp GTTAGGGCTCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCCTGGGTTTCACCTCCTaGTCTAAAAGAGAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: VRAPSWQPWETIGVEPQALGFTS*SKREGV
Trigger: GACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAG...GGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp AGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACAAAGAGAGGGTTAAAGTaGTGCAGAGGAAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RKREGRVAHPDGHGQTTTKRGLK*CRGKEG
Trigger: CCCTTCCTTTCCTCTGCAGCACTTTAACCCTCTCTT...TGTTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR GCA 90 bp TCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTAGAGGCGCCAATTCTACCAGGCTaGAGGGATTCTTTTCCACCC +
Preference number: 4 (lower is better)
Translates to: SFLAALGNHRGRAPSLEAPILPG*RDSFPP
Trigger: GGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGG...CGCCTCTAGGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GCTGAGATCTGGTCAAACGTCCGGCCTCGAGTTTCAGGTACTCTTAAGAAGGTGAGGGGAATGAGGGGGTaGTCAGACCACCCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: AEIWSNVRPRVSGTLKKVRGMRG*SDHPSP
Trigger: GGGGGAAGGGTGGTCTGAGCACCCCCTCATTCCCCT...CACCTTCTTAAGAGTACCTGAAACTCGAGGCCGGACGTTTGACCAGATCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp TTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGAGGGGAATGAGGGGGTaGTCAGACCACCCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: FHLATHGHILSCSLLPWKRGMRG*SDHPSP
Trigger: GGGGGAAGGGTGGTCTGAGCACCCCCTCATTCCCCT...CTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GTCCTTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGCTAGAGGCGGGAGCCTaGCGTCCTTCCATCTTGCCA +
Preference number: 4 (lower is better)
Translates to: VLPSCHTWAHTFLFPLALLEAGA*RPSILP
Trigger: TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAG...CAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTTCTCTGACTCCGGCCTaGAGCGCAGAACCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: PHSLRNILETHANDEVARSLTPA*SAEPAE
Trigger: CTCCGCAGGTTCTGCGCTCCAGGCCGGAGTCAGAGA...ACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GCTGAGATCTGGTCAAACGTCCGGCCTCGAGTTTCAGGTACTCTTAAGAAGGTGTCTCTGACTCCGGCCTaGAGCGCAGAACCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: AEIWSNVRPRVSGTLKKVSLTPA*SAEPAE
Trigger: CTCCGCAGGTTCTGCGCTCCAGGCCGGAGTCAGAGA...CACCTTCTTAAGAGTACCTGAAACTCGAGGCCGGACGTTTGACCAGATCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp TTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTTCTCTGACTCCGGCCTaGAGCGCAGAACCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: LILWSRWSTKLTQRPMVCSLTPA*SAEPAE
Trigger: CTCCGCAGGTTCTGCGCTCCAGGCCGGAGTCAGAGA...ACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571308.5
ENST00000671706.1
CDS-3UTR CCA 90 bp GAAGCCAAAGATGGCCACAATGGAGACGTAGCTCATGGCTGGAACTCGCTCCAGTCGGAGCCTATCTGTTaGAAGCCCGACGGCATCTCG +
Preference number: 4 (lower is better)
Translates to: EAKDGHNGDVAHGWNSLQSEPIC*KPDGIS
Trigger: CGAGATGCCGTCGGGCTTCCAACAGATAGGCTCCGA...CTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR CCA 90 bp AGCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGGGTGCCTGGAGGGATaGAGCTGGGTCCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SFPILPGCRDSFPPGNNRGCLEG*SWVPQA
Trigger: GGCCTGAGGGACCCAGCTCCATCCCTCCAGGCACCC...CCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp TGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGGGTGCCTGGAGGGATaGAGCTGGGTCCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: WCVSDTSVTIQSRSAPFLGCLEG*SWVPQA
Trigger: GGCCTGAGGGACCCAGCTCCATCCCTCCAGGCACCC...AAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp CAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCGGTGGTGAGGGTGCCTaGAGGGATGGAGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: QSFSSGPKYSSSVLGFTSGGEGA*RDGAGS
Trigger: GGACCCAGCTCCATCCCTCCAGGCACCCTCACCACC...GGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTCGCCCACGGAAAAGATaGCCACGGAGAGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PHSLRNILETHANDEVARRPRKR*PRRGPR
Trigger: TCTGGGCCCTCTCCGTGGCCATCTTTTCCGTGGGCG...ACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp TTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCCGCCCACGGAAAAGATaGCCACGGAGAGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: FLALILWSRWSTKLTQRPRPRKR*PRRGPR
Trigger: TCTGGGCCCTCTCCGTGGCCATCTTTTCCGTGGGCG...GGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp CACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCGCCCCGCAGGTGAGTaGGAGCAATCTCCCCCACGT +
Preference number: 4 (lower is better)
Translates to: HWCVSDTSVTIQSRSAPFRPAGE*EQSPPR
Trigger: ACGTGGGGGAGATTGCTCCCACTCACCTGCGGGGCG...GAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GTGCTGGGTTTCACCTCCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTATAACAATGGCCAGTTaGTTGAGCGTCCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: VLGFTSCSKREGVRWKAAITMAS*LSVPRA
Trigger: CGCCCTGGGGACGCTCAACCAACTGGCCATTGTTAT...AGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR CCA 90 bp GAGTGCCCCTATCATGGGTTTCACTGCCCATCTGTGACATGGGCTGACACCTCCTCCAAGCCCAGCACCTaGGCGATCAGAATGCCGATA +
Preference number: 4 (lower is better)
Translates to: ECPYHGFHCPSVTWADTSSKPST*AIRMPI
Trigger: TATCGGCATTCTGATCGCCCAGGTGCTGGGCTTGGA...GGAGGTGTCAGCCCATGTCACAGATGGGCAGTGAAACCCATGATAGGGGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp TCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGCTGGAGCAGGGACAGTaGCCGCTCACGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SLPCFDSVEQVVHQTDPKLEQGQ*PLTLQL
Trigger: AAGCTGGAGCGTGAGCGGCCACTGTCCCTGCTCCAG...CTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTATCAGGGGCTGCCGGTaGGTACGGCTGCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: WCVSDTSVTIQSRSAPFLIRGCR*VRLPRS
Trigger: GCTCCTGGGCAGCCGTACCCACCGGCAGCCCCTGAT...AAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGTCCGGGACGTAGCTCATGGCTaGAACTCGCTCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SKREGVRWKAAEIWSNVRDVAHG*NSLQQE
Trigger: CTCCTGCTGGAGCGAGTTCCAGCCATGAGCTACGTC...CCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGGACGTAGCTCATGGCTaGAACTCGCTCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PALKERVSGGRQLRSGQTDVAHG*NSLQQE
Trigger: CTCCTGCTGGAGCGAGTTCCAGCCATGAGCTACGTC...CGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp AAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCCGGGCGGGGTCCCTaGCTGAAGAGCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: KLCHWCVSDTSVTIQSRSAGRGP*LKSSAT
Trigger: CGTGGCCGAGCTCTTCAGCCAGGGACCCCGCCCGGC...TGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGTCCGGAGAGAGGGTGTCCGGTaGAAGGCAGCTGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: SKREGVRWKAAEIWSNVRREGVR*KAAEIW
Trigger: CCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCT...CCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GTCCTTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGTCTCCCACCCCTGCCTaGCCCCTCAGTCGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: VLPSCHTWAHTFLFPLALSPTPA*PLSRSH
Trigger: ATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGA...CAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCCCGGGTAGAGAGAGCTaGCTCTCCCACCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PQSFSSGPKYSSSVLGFTPGRES*LSHPCL
Trigger: CAGGCAGGGGTGGGAGAGCCAGCTCTCTCTACCCGG...GGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCAGAGGGAGGGGAGAGTaGCCCACCCTGATGGCCACG +
Preference number: 4 (lower is better)
Translates to: QSFSSGPKYSSSVLGFTSRGRGE*PTLMAT
Trigger: CGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCT...GGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp TCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCAAGGTGGTGGGAAACTaGATTTCTTGTCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SFSLQGSRENSLRQARWLKVVGN*ISCLLS
Trigger: GGACAGGAGACAAGAAATCCAGTTTCCCACCACCTT...GAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CCCCTTTGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGCACTGCACTCGAGCCTaGGCGACAGAGCGAGACTGT +
Preference number: 4 (lower is better)
Translates to: PLCPESAWQEFSESPRLWHCTRA*ATERDC
Trigger: ACAGTCTCGCTCTGTCGCCCAGGCTCGAGTGCAGTG...CCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCAAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp AGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGAGGGGTGAAGAGTTATaGTCCCTGTCTCAGCCCATC +
Preference number: 4 (lower is better)
Translates to: REVSPFPCRGQERTPFARRGEEL*SLSQPI
Trigger: GATGGGCTGAGACAGGGACCATAACTCTTCACCCCT...CCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp AGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACAAGCAATGCCCGGCACTaGCAGCTACAATTTATTGAG +
Preference number: 4 (lower is better)
Translates to: RKREGRVAHPDGHGQTTTSNARH*QLQFIE
Trigger: CTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCT...TGTTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp CATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGGCTGAGCCTGCAGTGTGCCCATCTGTGACATaGGCTGACACCTCCCTCACA +
Preference number: 4 (lower is better)
Translates to: HGHILSCSLLPWKAEPAVCPSVT*ADTSLT
Trigger: TGTGAGGGAGGTGTCAGCCCATGTCACAGATGGGCA...CACTGCAGGCTCAGCCTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp GTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACAGGGCAAGACCCGCCTaGATCTGCTTTCCCGAGTCG +
Preference number: 4 (lower is better)
Translates to: VSSLPCFDSVEQVVHQTDRARPA*ICFPES
Trigger: CGACTCGGGAAAGCAGATCCAGGCGGGTCTTGCCCT...GTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR CCA 90 bp AGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCATGTGATGCCCACCTCTaGCCTACGGTGTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SSLPCFDSVEQVVHQTDPCDAHL*PTVWEA
Trigger: AGCCTCCCACACCGTAGGCCAGAGGTGGGCATCACA...TGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp CCCCTTTGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGCAGGGGCGGCGAAGATaGAAGAACCGATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: PLCPESAWQEFSESPRLWQGRRR*KNRSWS
Trigger: ACTCCAGGATCGGTTCTTTCATCTTCGCCGCCCCTG...CCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCAAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp GTCCTTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGCAGGGGCGGCGAAGATaGAAGAACCGATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: VLPSCHTWAHTFLFPLALQGRRR*KNRSWS
Trigger: ACTCCAGGATCGGTTCTTTCATCTTCGCCGCCCCTG...CAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp GTTAGGGCTCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTTCCTTCCAAGCCACTaGGAGATGATACCAATGAGG +
Preference number: 4 (lower is better)
Translates to: VRAPSWQPWETIGVEPQAFLPSH*EMIPMR
Trigger: CCTCATTGGTATCATCTCTCAGTGGCTTGGAAGGAA...GGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp AGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCACCGCCAGGACATTGTTaGCCAGCATGGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SSLPCFDSVEQVVHQTDPPPGHC*PAWPFS
Trigger: GGAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGG...TGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp GTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGGGAATCGTCCAAGGATaGGCATTTCATAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VVHQTDPKTHGLWLEESLGIVQG*AFHRRQ
Trigger: CTGCCTCCTATGAAATGCTCATCCTTGGACGATTCC...CAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp AGCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAGAGTGGCCCACCCTaGTGGCCACGGCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: SFPILPGCRDSFPPGNNRESGPP*WPRPNH
Trigger: GTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTC...CCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR TCA 90 bp TCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTAGAGGCGTCTGGTTTGTCCCACTaGGAAAGTCTAGACCTGTCT +
Preference number: 4 (lower is better)
Translates to: SFLAALGNHRGRAPSLEASGLSH*ESLDLS
Trigger: AGACAGGTCTAGACTTTCTCAGTGGGACAAACCAGA...CGCCTCTAGGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp ACCTGTCTTCCCTCCAATCCCCCTTCTCTAGCAGCGAAGAAGGTATTCTGGAGCTTCACTGCCCATCTGTaGCATGGGCTGACACCTCCC +
Preference number: 4 (lower is better)
Translates to: TCLPSNPPSLAAKKVFWSFTAHL*HGLTPP
Trigger: GGGAGGTGTCAGCCCATGTCACAGATGGGCAGTGAA...GCTCCAGAATACCTTCTTCGCTGCTAGAGAAGGGGGATTGGAGGGAAGACAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp TTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTTCGAAACACTGCCCGTaGGCGAAGACGGACGGACAG +
Preference number: 4 (lower is better)
Translates to: LILWSRWSTKLTQRPMVCSKHCP*AKTDGQ
Trigger: CTGTCCGTCCGTCTTCGCTCACGGGCAGTGTTTCGA...ACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR TCA 90 bp GGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGGGCTGGAGGAGTCCCTaGCGGGGAAGCAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GKLCHWCVSDTSVTIQSRGWRSP*RGSRWA
Trigger: AGCCCACCTGCTTCCCCGTCAGGGACTCCTCCAGCC...CCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp CCCCTTTGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGGGCCATTCCAGAGGTaGGCAGTTACCGAGACCAAG +
Preference number: 4 (lower is better)
Translates to: PLCPESAWQEFSESPRLWGPFQR*AVTETK
Trigger: CTTGGTCTCGGTAACTGCTCACCTCTGGAATGGCCC...CCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCAAAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR GCA 90 bp TTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGCTGGAGCGCAGAACCTaGGGAGGCCGCGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: FYSWSKVSYATGAFQTPQLERRT*GGRGGP
Trigger: GGGACCCCCGCGGCCTCCGCAGGTTCTGCGCTCCAG...CTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571308.5
ENST00000671706.1
CDS-3UTR GCA 90 bp AGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGGGTCCCTCAGGCCCCTaGCTCCCCAGCCACGTCTCA +
Preference number: 4 (lower is better)
Translates to: SYATGAFQTPQLLSNLGQGPSGP*LPSHVS
Trigger: TGAGACGTGGCTGGGGAGGCAGGGGCCTGAGGGACC...CTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp GTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGGCCACAGGCTGGCAGTaGCCAGGAGGGACTCCAAGC +
Preference number: 4 (lower is better)
Translates to: VTIQSRSAPFLALILWSRATGWQ*PGGTPS
Trigger: GCTTGGAGTCCCTCCTGGGCACTGCCAGCCTGTGGC...CCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp CAGCCCATCCTCAAGTACCTCCACAATAGGATGCTTGTCTTCAGCAGTGACTTTGCCACAGGCTGGCAGTaGCCAGGAGGGACTCCAAGC +
Preference number: 4 (lower is better)
Translates to: QPILKYLHNRMLVFSSDFATGWQ*PGGTPS
Trigger: GCTTGGAGTCCCTCCTGGGCACTGCCAGCCTGTGGC...AAAGTCACTGCTGAAGACAAGCATCCTATTGTGGAGGTACTTGAGGATGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp GTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGGCAATGATCAGGGGCTaGCGGTGGGTACGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VTIQSRSAPFLALILWSRAMIRG*RWVRLP
Trigger: GGGCAGCCGTACCCACCGGCAGCCCCTGATCATTGC...CCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp AGCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGCAATGATCAGGGGCTaGCGGTGGGTACGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SFPILPGCRDSFPPGNNRAMIRG*RWVRLP
Trigger: GGGCAGCCGTACCCACCGGCAGCCCCTGATCATTGC...CCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR GCA 90 bp AGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAGGCTGGCCTACCCCTaGTGTCTCGAAGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSLPCFDSVEQVVHQTDPRLAYP*CLEDAG
Trigger: ACCAGCATCTTCGAGACAGCAGGGGTAGGCCAGCCT...TGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp AGCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGTGGCTCTCCCACCCCTaGCTGGCCCCTCAGTCGTTC +
Preference number: 4 (lower is better)
Translates to: SFPILPGCRDSFPPGNNRWLSHP*LAPQSF
Trigger: GAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCCA...CCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR GCA 90 bp CAGCCCATCCTCAAGTACCTCCACAATAGGATGCTTGTCTTCAGCAGTGACTTTTGGCTCTCCCACCCCTaGCTGGCCCCTCAGTCGTTC +
Preference number: 4 (lower is better)
Translates to: QPILKYLHNRMLVFSSDFWLSHP*LAPQSF
Trigger: GAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCCA...AAAGTCACTGCTGAAGACAAGCATCCTATTGTGGAGGTACTTGAGGATGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp GGCTCTCCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTAAGAGAGGGTTAAAGTaGTGCAGAGGAAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GSPTPAWPLSRSHLALNTKRGLK*CRGKEG
Trigger: CCCTTCCTTTCCTCTGCAGCACTTTAACCCTCTCTT...AGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp TCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTAGAGGCGAAGAGAGGGTTAAAGTaGTGCAGAGGAAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SFLAALGNHRGRAPSLEAKRGLK*CRGKEG
Trigger: CCCTTCCTTTCCTCTGCAGCACTTTAACCCTCTCTT...CGCCTCTAGGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GCTGAGATCTGGTCAAACGTCCGGCCTCGAGTTTCAGGTACTCTTAAGAAGGTGCTAGAGGCGGGAGCCTaGCGTCCTTCCATCTTGCCA +
Preference number: 4 (lower is better)
Translates to: AEIWSNVRPRVSGTLKKVLEAGA*RPSILP
Trigger: TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAG...CACCTTCTTAAGAGTACCTGAAACTCGAGGCCGGACGTTTGACCAGATCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR GCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGGCCTGGCATCCTTGCTaGCATGTCTCCAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: CPESAWQEFSESPRLWEEAWHPC*HVSSCV
Trigger: GACACAGCTGGAGACATGGCAGCAAGGATGCCAGGC...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp CACCTCCCTCACAGAGTGAGTATTCTGCAAATGCCAAGAGCAATGCCCGGCACTGCCTGGCATCCTTGCTaGCATGTCTCCAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: HLPHRVSILQMPRAMPGTAWHPC*HVSSCV
Trigger: GACACAGCTGGAGACATGGCAGCAAGGATGCCAGGC...AGTGCCGGGCATTGCTCTTGGCATTTGCAGAATACTCACTCTGTGAGGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp CACCTCCCTCACAGAGTGAGTATTCTGCAAATGCCAAGAGCAATGCCCGGCACTAGGGCCTGGCATCCTTaGTGCCATGTCTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: HLPHRVSILQMPRAMPGTRAWHP*CHVSSC
Trigger: ACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCT...AGTGCCGGGCATTGCTCTTGGCATTTGCAGAATACTCACTCTGTGAGGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp TTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCTCCACTTGCTGCCTGTaGCCCGAAAGGCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: FLALILWSRWSTKLTQRPSTCCL*PERPSR
Trigger: TCTGGAGGGCCTTTCGGGGCACAGGCAGCAAGTGGA...GGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR GCA 90 bp ATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCGCAGAATCCACTTGCTaGCTGTGCCCCGAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: IQSRSAPFLALILWSRWSAESTC*LCPERP
Trigger: GGGCCTTTCGGGGCACAGGCAGCAAGTGGATTCTGC...GGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR GCA 90 bp TCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCTCGCAGAATCCACTTaGTGCCTGTGCCCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: SAPFLALILWSRWSTKLTLAEST*CLCPER
Trigger: CCTTTCGGGGCACAGGCAGCAAGTGGATTCTGCGAG...GGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR CCA 90 bp GCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCTCTCCCCCACGTACATaGGCACCAGCCCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: ALILWSRWSTKLTQRPMVSPPRT*APALMS
Trigger: TGACATCAGGGCTGGTGCCCATGTACGTGGGGGAGA...GACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp CACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTGGAGCAGGGACAGTaGCCGCTCACGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: HWCVSDTSVTIQSRSAPFLEQGQ*PLTLQL
Trigger: AAGCTGGAGCGTGAGCGGCCACTGTCCCTGCTCCAG...GAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp CCCCTTTGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGCACCAGCTCCTATGGTaGCATAGGCAGGCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: PLCPESAWQEFSESPRLWHQLLW*HRQAGL
Trigger: TAGGCCAGCCTGCCTATGCCACCATAGGAGCTGGTG...CCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCAAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGCCACACCAGCTCCTATaGTGGCATAGGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LALILWSRWSTKLTQRPMPHQLL*WHRQAG
Trigger: GCCAGCCTGCCTATGCCACCATAGGAGCTGGTGTGG...CATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCCCACAGTCATCAGGATaGCACAGCCACACATGCCCG +
Preference number: 4 (lower is better)
Translates to: ALILWSRWSTKLTQRPMVPQSSG*HSHTCP
Trigger: CGGGCATGTGTGGCTGTGCCATCCTGATGACTGTGG...GACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp CCCCTTTGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGCCACAGTCATCAGGATaGCACAGCCACACATGCCCG +
Preference number: 4 (lower is better)
Translates to: PLCPESAWQEFSESPRLWPQSSG*HSHTCP
Trigger: CGGGCATGTGTGGCTGTGCCATCCTGATGACTGTGG...CCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCAAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CACCTCCCTCACAGAGTGAGTATTCTGCAAATGCCAAGAGCAATGCCCGGCACTGACGTAGCTCATGGCTaGAACTCGCTCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HLPHRVSILQMPRAMPGTDVAHG*NSLQQE
Trigger: CTCCTGCTGGAGCGAGTTCCAGCCATGAGCTACGTC...AGTGCCGGGCATTGCTCTTGGCATTTGCAGAATACTCACTCTGTGAGGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp TCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGTCCGGTGGAGACGTAGCTCATaGCTGGAACTCGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SKREGVRWKAAEIWSNVRWRRSS*LELAPA
Trigger: TGCTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCA...CCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGACGCAAAGATGGCCACAATaGAGACGTAGCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: VHQTDPKTHGLWLEESLTQRWPQ*RRSSWL
Trigger: CAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTG...CGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGCAAAGATGGCCACAATaGAGACGTAGCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: EQVVHQTDPKTHGLWLEEQRWPQ*RRSSWL
Trigger: CAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTG...CTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GAGTGCCCCTATCATGGGTTTCACTGCCCATCTGTGACATGGGCTGACACCTCCAGTTGCTCGTCCAGTTaGAGAAACCAGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: ECPYHGFHCPSVTWADTSSCSSS*RNQPQP
Trigger: TGGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACT...GGAGGTGTCAGCCCATGTCACAGATGGGCAGTGAAACCCATGATAGGGGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp CTCCACCAACAACACCGAGACCAAGGTGAAGACTGTGTTGACCACACCAGCTCCAAGGCAGCTGAGATCTaGTCAAACGTCCGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: LHQQHRDQGEDCVDHTSSKAAEI*SNVRPR
Trigger: TCGAGGCCGGACGTTTGACCAGATCTCAGCTGCCTT...GGAGCTGGTGTGGTCAACACAGTCTTCACCTTGGTCTCGGTGTTGTTGGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR CCA 90 bp TTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGTCTCCCACCCCTGCCTaGCCCCTCAGTCGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: FHLATHGHILSCSLLPWKSPTPA*PLSRSH
Trigger: ATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGA...CTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp TTTCCAGGCAGCCTTTCAAATCCCCTCTTTGCCTTAGTTGGTCAAAAGCCTGTGCCGGGTAGAGAGAGCTaGCTCTCCCACCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: FPGSLSNPLFALVGQKPVPGRES*LSHPCL
Trigger: CAGGCAGGGGTGGGAGAGCCAGCTCTCTCTACCCGG...CACAGGCTTTTGACCAACTAAGGCAAAGAGGGGATTTGAAAGGCTGCCTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CAGCCCATCCTCAAGTACCTCCACAATAGGATGCTTGTCTTCAGCAGTGACTTTAGAGGGAGGGGAGAGTaGCCCACCCTGATGGCCACG +
Preference number: 4 (lower is better)
Translates to: QPILKYLHNRMLVFSSDFRGRGE*PTLMAT
Trigger: CGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCT...AAAGTCACTGCTGAAGACAAGCATCCTATTGTGGAGGTACTTGAGGATGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp AGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGTCCTGCTCTCTGCTCTaGTTTGTCCCACTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: REVSPFPCRGQERTPFARSCSLL*FVPLRK
Trigger: CTTTCTCAGTGGGACAAACCAGAGCAGAGAGCAGGA...CCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GTTAGGGCTCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCAGGAGTCCAAGGTGGTaGGAAACTGGATTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: VRAPSWQPWETIGVEPQARSPRW*ETGFLV
Trigger: GACAAGAAATCCAGTTTCCCACCACCTTGGACTCCT...GGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp AGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGGGGAGGAGTCCAAGGTaGTGGGAAACTGGATTTCTT +
Preference number: 4 (lower is better)
Translates to: REVSPFPCRGQERTPFARGRSPR*WETGFL
Trigger: AAGAAATCCAGTTTCCCACCACCTTGGACTCCTCCC...CCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CCCTGGAAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTAGTACAACCGACCTTTaGTTTCTTCTCTCAATCCCC +
Preference number: 4 (lower is better)
Translates to: PWKAEPAVREVSPFPCRGSTTDL*FLLSIP
Trigger: GGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT...ACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp ATTCTGCAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCGCCGTGGGCAGGGCCTaGCATCCTTGCTGCCATGTC +
Preference number: 4 (lower is better)
Translates to: ILQMPRAMPGTGSYNLLSAVGRA*HPCCHV
Trigger: GACATGGCAGCAAGGATGCCAGGCCCTGCCCACGGC...GCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTGCAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp CAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCATTTACGGGGATGTGGGGCCGTaGGCAGGGCCTGGCATCCTT +
Preference number: 4 (lower is better)
Translates to: QMPRAMPGTGSYNLLSIYGDVGP*AGPGIL
Trigger: AAGGATGCCAGGCCCTGCCCACGGCCCCACATCCCC...GTAAATGCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp GCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCCAAGGGGGTGAACCCTaGCTCGCAGAATCCACTTGC +
Preference number: 4 (lower is better)
Translates to: ALILWSRWSTKLTQRPMVQGGEP*LAESTC
Trigger: GCAAGTGGATTCTGCGAGCCAGGGTTCACCCCCTTG...GACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR CCA 90 bp TCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCGGGGTTCCCCATCCATaGGGCCAAGGGAAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: SAPFLALILWSRWSTKLTGVPHP*GQGKVQ
Trigger: CTGAACTTTCCCTTGGCCCCATGGATGGGGAACCCC...GGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR CCA 90 bp ATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCTGTGATGCCCACCTCTaGCCTACGGTGTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: IQSRSAPFLALILWSRWSCDAHL*PTVWEA
Trigger: AGCCTCCCACACCGTAGGCCAGAGGTGGGCATCACA...GGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp TCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACAGGGGCGGCGAAGATaGAAGAACCGATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SRSAPFLALILWSRWSTKQGRRR*KNRSWS
Trigger: ACTCCAGGATCGGTTCTTTCATCTTCGCCGCCCCTG...TTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571308.5
ENST00000671706.1
CDS-3UTR TCA 90 bp GTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGACGTTCCTTCCAAGCCACTaGGAGATGATACCAATGAGG +
Preference number: 4 (lower is better)
Translates to: VHQTDPKTHGLWLEESLTFLPSH*EMIPMR
Trigger: CCTCATTGGTATCATCTCTCAGTGGCTTGGAAGGAA...CGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp GGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCTATCTTCCTTCCAAGCCACTaGGAGATGATACCAATGAGG +
Preference number: 4 (lower is better)
Translates to: GILAAMSPAVSLVKSAPIFLPSH*EMIPMR
Trigger: CCTCATTGGTATCATCTCTCAGTGGCTTGGAAGGAA...GATAGGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp GCTGAGATCTGGTCAAACGTCCGGCCTCGAGTTTCAGGTACTCTTAAGAAGGTGCCGCCAGGACATTGTTaGCCAGCATGGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: AEIWSNVRPRVSGTLKKVPPGHC*PAWPFS
Trigger: GGAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGG...CACCTTCTTAAGAGTACCTGAAACTCGAGGCCGGACGTTTGACCAGATCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR TCA 90 bp CATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGGCTGAGCCTGCAGTGGGAATCGTCCAAGGATaGGCATTTCATAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HGHILSCSLLPWKAEPAVGIVQG*AFHRRQ
Trigger: CTGCCTCCTATGAAATGCTCATCCTTGGACGATTCC...CACTGCAGGCTCAGCCTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp TTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGAGGGCGCCCCGCAGGTaGGTGGGAGCAATCTCCCCC +
Preference number: 4 (lower is better)
Translates to: FYSWSKVSYATGAFQTPQRAPRR*VGAISP
Trigger: GGGGGAGATTGCTCCCACTCACCTGCGGGGCGCCCT...CTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp GTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTGGGCAGGTAGCACTGTaGGGCCCAGGAGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: VSYATGAFQTPQLLSNLGGQVAL*GPGAVA
Trigger: GGCCACTGCTCCTGGGCCTCACAGTGCTACCTGCCC...ACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp GTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTGCAGCACGACCGCAATaGTCAGGGGCTGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: VSYATGAFQTPQLLSNLGAARPQ*SGAAGG
Trigger: CCCACCGGCAGCCCCTGATCATTGCGGTCGTGCTGC...ACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp AAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCAGCACGACCGCAATaGTCAGGGGCTGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: KLCHWCVSDTSVTIQSRSAARPQ*SGAAGG
Trigger: CCCACCGGCAGCCCCTGATCATTGCGGTCGTGCTGC...TGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp CAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCCCGGTGGAAGGCAGCTaGGATCTGGTCAAACGTCCG +
Preference number: 4 (lower is better)
Translates to: QSFSSGPKYSSSVLGFTSPVEGS*DLVKRP
Trigger: CGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGG...GGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR TCA 90 bp AAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGGTGGCAAGAATTCAGTaGAAGTCCCAGATTGTGGGA +
Preference number: 4 (lower is better)
Translates to: KAEPAVREVSPFPCRGQEVARIQ*KSQIVG
Trigger: TCCCACAATCTGGGACTTTCACTGAATTCTTGCCAC...CTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGATCTGTGACATGGGCTaGCACCTCCCTCACAGAGTG +
Preference number: 4 (lower is better)
Translates to: CPESAWQEFSESPRLWEEICDMG*HLPHRV
Trigger: CACTCTGTGAGGGAGGTGTCAGCCCATGTCACAGAT...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp AAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGGCTGGAGGAGTCCCTaGCGGGGAAGCAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: KLCHWCVSDTSVTIQSRSGWRSP*RGSRWA
Trigger: AGCCCACCTGCTTCCCCGTCAGGGACTCCTCCAGCC...TGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp GCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAGGTGGTCCACCAAACTaGCCCAAAGACCCATGGTCT +
Preference number: 4 (lower is better)
Translates to: APFLALILWSRWSTKLTQGGPPN*PKDPWS
Trigger: AGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACC...TTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp AGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAGGTGGTCCACCAAACTaGCCCAAAGACCCATGGTCT +
Preference number: 4 (lower is better)
Translates to: SSLPCFDSVEQVVHQTDPGGPPN*PKDPWS
Trigger: AGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACC...TGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp GAAGCCAAAGATGGCCACAATGGAGACGTAGCTCATGGCTGGAACTCGCTCCAGGGAAGGAGGAAATCATaGCGCCCACGGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: EAKDGHNGDVAHGWNSLQGRRKS*RPRKRW
Trigger: CCATCTTTTCCGTGGGCGGCATGATTTCCTCCTTCC...CTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR GCA 90 bp CCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGGGAAGGAGGAAATCATaGCGCCCACGGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: PALKERVSGGRQLRSGQTGRRKS*RPRKRW
Trigger: CCATCTTTTCCGTGGGCGGCATGATTTCCTCCTTCC...CGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp GGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGGCAATGATCAGGGGCTaGCGGTGGGTACGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GKLCHWCVSDTSVTIQSRAMIRG*RWVRLP
Trigger: GGGCAGCCGTACCCACCGGCAGCCCCTGATCATTGC...CCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp TCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAAAGCTGCTGGCTCAGCTaGAGCACGACCGCAATGATC +
Preference number: 4 (lower is better)
Translates to: SRSAPFLALILWSRWSTKSCWLS*STTAMI
Trigger: GATCATTGCGGTCGTGCTGCAGCTGAGCCAGCAGCT...TTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp TTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCAGGCTGGCCTACCCCTaGTGTCTCGAAGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: FLALILWSRWSTKLTQRPRLAYP*CLEDAG
Trigger: ACCAGCATCTTCGAGACAGCAGGGGTAGGCCAGCCT...GGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp CTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCAGGCTGGCCTACCCCTaGTGTCTCGAAGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: LPCFDSVEQVVHQTDPKTRLAYP*CLEDAG
Trigger: ACCAGCATCTTCGAGACAGCAGGGGTAGGCCAGCCT...GGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGTTTCCTGTTCCCTCTTaGCCTGGAAGGCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: CPESAWQEFSESPRLWEEFPVPS*PGRLSL
Trigger: CAGGCTCAGCCTTCCAGGGCAAGAGGGAACAGGAAA...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGCTAGAGGCGGGAGCCTaGCGTCCTTCCATCTTGCCA +
Preference number: 4 (lower is better)
Translates to: ASQFYQAAGILFHPEIIGLEAGA*RPSILP
Trigger: TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAG...CCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp TGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTTCTCTGACTCCGGCCTaGAGCGCAGAACCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: WCVSDTSVTIQSRSAPFLSLTPA*SAEPAE
Trigger: CTCCGCAGGTTCTGCGCTCCAGGCCGGAGTCAGAGA...AAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571308.5
ENST00000671706.1
CDS-3UTR CCA 90 bp AGCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGTCTCTGACTCCGGCCTaGAGCGCAGAACCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: SFPILPGCRDSFPPGNNRSLTPA*SAEPAE
Trigger: CTCCGCAGGTTCTGCGCTCCAGGCCGGAGTCAGAGA...CCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp TCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAATCGGAGCCTATCTGTTaGAAGCCCGACGGCATCTCG +
Preference number: 4 (lower is better)
Translates to: SRSAPFLALILWSRWSTKSEPIC*KPDGIS
Trigger: CGAGATGCCGTCGGGCTTCCAACAGATAGGCTCCGA...TTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571308.5
ENST00000671706.1
CDS-3UTR CCA 90 bp ATTCTGCAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCCGCCCACGGAAAAGATaGCCACGGAGAGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ILQMPRAMPGTGSYNLLSRPRKR*PRRGPR
Trigger: TCTGGGCCCTCTCCGTGGCCATCTTTTCCGTGGGCG...GCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTGCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp CTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCTCTCCCCCACGTACATaGGCACCAGCCCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: LPCFDSVEQVVHQTDPKTSPPRT*APALMS
Trigger: TGACATCAGGGCTGGTGCCCATGTACGTGGGGGAGA...GGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACATAACAATGGCCAGTTaGTTGAGCGTCCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: VSSLPCFDSVEQVVHQTDITMAS*LSVPRA
Trigger: CGCCCTGGGGACGCTCAACCAACTGGCCATTGTTAT...GTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp ACCTGTCTTCCCTCCAATCCCCCTTCTCTAGCAGCGAAGAAGGTATTCTGGAGCTCCAAGCCCAGCACCTaGGCGATCAGAATGCCGATA +
Preference number: 4 (lower is better)
Translates to: TCLPSNPPSLAAKKVFWSSKPST*AIRMPI
Trigger: TATCGGCATTCTGATCGCCCAGGTGCTGGGCTTGGA...GCTCCAGAATACCTTCTTCGCTGCTAGAGAAGGGGGATTGGAGGGAAGACAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp ATTCTGCAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCCTGGAGCAGGGACAGTaGCCGCTCACGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: ILQMPRAMPGTGSYNLLSLEQGQ*PLTLQL
Trigger: AAGCTGGAGCGTGAGCGGCCACTGTCCCTGCTCCAG...GCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTGCAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp TTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCCACCAGCTCCTATGGTaGCATAGGCAGGCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: FLALILWSRWSTKLTQRPHQLLW*HRQAGL
Trigger: TAGGCCAGCCTGCCTATGCCACCATAGGAGCTGGTG...GGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGCCACACCAGCTCCTATaGTGGCATAGGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGPHQLL*WHRQAG
Trigger: GCCAGCCTGCCTATGCCACCATAGGAGCTGGTGTGG...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCCACAGTCATCAGGATaGCACAGCCACACATGCCCG +
Preference number: 4 (lower is better)
Translates to: LPCFDSVEQVVHQTDPKTPQSSG*HSHTCP
Trigger: CGGGCATGTGTGGCTGTGCCATCCTGATGACTGTGG...GGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGACGTAGCTCATGGCTaGAACTCGCTCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LILWSRWSTKLTQRPMVCDVAHG*NSLQQE
Trigger: CTCCTGCTGGAGCGAGTTCCAGCCATGAGCTACGTC...ACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACTGGAGACGTAGCTCATaGCTGGAACTCGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VSSLPCFDSVEQVVHQTDWRRSS*LELAPA
Trigger: TGCTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCA...GTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GTGCTGGGTTTCACCTCCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTCAAAGATGGCCACAATaGAGACGTAGCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: VLGFTSCSKREGVRWKAAQRWPQ*RRSSWL
Trigger: CAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTG...AGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CTCCACCAACAACACCGAGACCAAGGTGAAGACTGTGTTGACCACACCAGCTCCCCACGAAGCCAAAGATaGCCACAATGGAGACGTAGC +
Preference number: 4 (lower is better)
Translates to: LHQQHRDQGEDCVDHTSSPRSQR*PQWRRS
Trigger: GCTACGTCTCCATTGTGGCCATCTTTGGCTTCGTGG...GGAGCTGGTGTGGTCAACACAGTCTTCACCTTGGTCTCGGTGTTGTTGGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR CCA 90 bp TCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGTCCGGCCACGAAGCCAAAGATaGCCACAATGGAGACGTAGC +
Preference number: 4 (lower is better)
Translates to: SKREGVRWKAAEIWSNVRPRSQR*PQWRRS
Trigger: GCTACGTCTCCATTGTGGCCATCTTTGGCTTCGTGG...CCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GAAGCCAAAGATGGCCACAATGGAGACGTAGCTCATGGCTGGAACTCGCTCCAGAGTTGCTCGTCCAGTTaGAGAAACCAGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: EAKDGHNGDVAHGWNSLQSCSSS*RNQPQP
Trigger: TGGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACT...CTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR CCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGAAGGCAGCTGAGATCTaGTCAAACGTCCGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: CPESAWQEFSESPRLWEEKAAEI*SNVRPR
Trigger: TCGAGGCCGGACGTTTGACCAGATCTCAGCTGCCTT...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GTCCTTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGAAGGCAGCTGAGATCTaGTCAAACGTCCGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: VLPSCHTWAHTFLFPLALKAAEI*SNVRPR
Trigger: TCGAGGCCGGACGTTTGACCAGATCTCAGCTGCCTT...CAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GCTGAGATCTGGTCAAACGTCCGGCCTCGAGTTTCAGGTACTCTTAAGAAGGTGAGAGAGGGTGTCCGGTaGAAGGCAGCTGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: AEIWSNVRPRVSGTLKKVREGVR*KAAEIW
Trigger: CCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCT...CACCTTCTTAAGAGTACCTGAAACTCGAGGCCGGACGTTTGACCAGATCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCTCTCCCACCCCTGCCTaGCCCCTCAGTCGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: QSFSSGPKYSSSVLGFTSSPTPA*PLSRSH
Trigger: ATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGA...GGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp TCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGTCCGGGTTAGGGCTCCTTCTTaGCAGCCTTGGGAAACCATC +
Preference number: 4 (lower is better)
Translates to: SKREGVRWKAAEIWSNVRVRAPS*QPWETI
Trigger: GATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC...CCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR CCA 90 bp CTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGCAAGGGGGTGAACCCTaGCTCGCAGAATCCACTTGC +
Preference number: 4 (lower is better)
Translates to: LALILWSRWSTKLTQRPMQGGEP*LAESTC
Trigger: GCAAGTGGATTCTGCGAGCCAGGGTTCACCCCCTTG...CATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR CCA 90 bp GTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGGAAAGTTCAGCGTCCTaGAGGGCGGCCAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VTIQSRSAPFLALILWSRESSAS*RAARSG
Trigger: CCCACTCCTGGCCGCCCTCCAGGACGCTGAACTTTC...CCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR CCA 90 bp ATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCGGGGTTCCCCATCCATaGGGCCAAGGGAAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: IQSRSAPFLALILWSRWSGVPHP*GQGKVQ
Trigger: CTGAACTTTCCCTTGGCCCCATGGATGGGGAACCCC...GGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR CCA 90 bp CAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCGGTAAGTTATGCCACTaGTGCGTTTCAGACACCTCA +
Preference number: 4 (lower is better)
Translates to: QVVHQTDPKTHGLWLEESGKLCH*CVSDTS
Trigger: TGAGGTGTCTGAAACGCACCAGTGGCATAACTTACC...GGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp CAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCCAGGGGCGGCGAAGATaGAAGAACCGATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: QSFSSGPKYSSSVLGFTSQGRRR*KNRSWS
Trigger: ACTCCAGGATCGGTTCTTTCATCTTCGCCGCCCCTG...GGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR TCA 90 bp GAGTGCCCCTATCATGGGTTTCACTGCCCATCTGTGACATGGGCTGACACCTCCTTCCTTCCAAGCCACTaGGAGATGATACCAATGAGG +
Preference number: 4 (lower is better)
Translates to: ECPYHGFHCPSVTWADTSFLPSH*EMIPMR
Trigger: CCTCATTGGTATCATCTCTCAGTGGCTTGGAAGGAA...GGAGGTGTCAGCCCATGTCACAGATGGGCAGTGAAACCCATGATAGGGGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp GCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGCCGCCAGGACATTGTTaGCCAGCATGGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: ASQFYQAAGILFHPEIIGPPGHC*PAWPFS
Trigger: GGAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGG...CCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR TCA 90 bp GAAGCCAAAGATGGCCACAATGGAGACGTAGCTCATGGCTGGAACTCGCTCCAGGGAATCGTCCAAGGATaGGCATTTCATAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: EAKDGHNGDVAHGWNSLQGIVQG*AFHRRQ
Trigger: CTGCCTCCTATGAAATGCTCATCCTTGGACGATTCC...CTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR TCA 90 bp GAGTGCCCCTATCATGGGTTTCACTGCCCATCTGTGACATGGGCTGACACCTCCTCTGGTTTGTCCCACTaGGAAAGTCTAGACCTGTCT +
Preference number: 4 (lower is better)
Translates to: ECPYHGFHCPSVTWADTSSGLSH*ESLDLS
Trigger: AGACAGGTCTAGACTTTCTCAGTGGGACAAACCAGA...GGAGGTGTCAGCCCATGTCACAGATGGGCAGTGAAACCCATGATAGGGGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp CACCTCCCTCACAGAGTGAGTATTCTGCAAATGCCAAGAGCAATGCCCGGCACTCTAGTAACTCACTGTTaGAGGTGGGGAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: HLPHRVSILQMPRAMPGTLVTHC*RWGGGD
Trigger: ATCCCCTCCTCCCCACCTTCAACAGTGAGTTACTAG...AGTGCCGGGCATTGCTCTTGGCATTTGCAGAATACTCACTCTGTGAGGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp TCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAAGGTGGTCCACCAAACTaGCCCAAAGACCCATGGTCT +
Preference number: 4 (lower is better)
Translates to: SRSAPFLALILWSRWSTKGGPPN*PKDPWS
Trigger: AGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACC...TTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp CAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCTCCAAGCCCAGCACCTaGGTAGGCGCCAATGAGGAA +
Preference number: 4 (lower is better)
Translates to: QSFSSGPKYSSSVLGFTSSKPST*VGANEE
Trigger: TTCCTCATTGGCGCCTACTCAGGTGCTGGGCTTGGA...GGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR TCA 90 bp CCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCAAGCCCAGCACCTaGGTAGGCGCCAATGAGGAA +
Preference number: 4 (lower is better)
Translates to: PQSFSSGPKYSSSVLGFTSKPST*VGANEE
Trigger: TTCCTCATTGGCGCCTACTCAGGTGCTGGGCTTGGA...GGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR GCA 90 bp GTATCATTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACACTGGAGCGCAGAACCTaGGGAGGCCGCGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: VSFYSWSKVSYATGAFQTLERRT*GGRGGP
Trigger: GGGACCCCCGCGGCCTCCGCAGGTTCTGCGCTCCAG...TGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAATGATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571308.5
ENST00000671706.1
CDS-3UTR GCA 90 bp GTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTGCAATGATCAGGGGCTaGCGGTGGGTACGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VSYATGAFQTPQLLSNLGAMIRG*RWVRLP
Trigger: GGGCAGCCGTACCCACCGGCAGCCCCTGATCATTGC...ACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp CCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCAGCTGCTGGCTCAGCTaGAGCACGACCGCAATGATC +
Preference number: 4 (lower is better)
Translates to: PQSFSSGPKYSSSVLGFTSCWLS*STTAMI
Trigger: GATCATTGCGGTCGTGCTGCAGCTGAGCCAGCAGCT...GGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp GAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAACTGCTGTCTCGAAGATaGTGGTCGAATAATAGAAAA +
Preference number: 4 (lower is better)
Translates to: EGRGRGEWPTLMATAKPQLLSRR*WSNNRK
Trigger: TTTTCTATTATTCGACCAGCATCTTCGAGACAGCAG...TTGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR GCA 90 bp GCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCCTGCTGTCTCGAAGATaGTGGTCGAATAATAGAAAA +
Preference number: 4 (lower is better)
Translates to: AWHPCCHVSSCVPGEECPLLSRR*WSNNRK
Trigger: TTTTCTATTATTCGACCAGCATCTTCGAGACAGCAG...GGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp GCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAGGCTGGCCTACCCCTaGTGTCTCGAAGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: ASQFYQAAGILFHPEIIGRLAYP*CLEDAG
Trigger: ACCAGCATCTTCGAGACAGCAGGGGTAGGCCAGCCT...CCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR GCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGACCTGGGAGACAGCTTaGAGTGAAGCAAGATCACGC +
Preference number: 4 (lower is better)
Translates to: CPESAWQEFSESPRLWEETWETA*SEARSR
Trigger: GCGTGATCTTGCTTCACTGCAAGCTGTCTCCCAGGT...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp CACCTCCCTCACAGAGTGAGTATTCTGCAAATGCCAAGAGCAATGCCCGGCACTGCCGTCCTTCCATCTTaGCACACATGGGCACATACT +
Preference number: 4 (lower is better)
Translates to: HLPHRVSILQMPRAMPGTAVLPS*HTWAHT
Trigger: AGTATGTGCCCATGTGTGGCAAGATGGAAGGACGGC...AGTGCCGGGCATTGCTCTTGGCATTTGCAGAATACTCACTCTGTGAGGGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGGTCCCTGGTGAAGAGTaGCCCTATCATGGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: CPESAWQEFSESPRLWEEVPGEE*PYHGFH
Trigger: GTGAAACCCATGATAGGGGCACTCTTCACCAGGGAC...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGAGGGCCTGGCATCCTTaGTGCCATGTCTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGRAWHP*CHVSSC
Trigger: ACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCT...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp TGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTTCCACTTGCTGCCTGTaGCCCGAAAGGCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: WCVSDTSVTIQSRSAPFLSTCCL*PERPSR
Trigger: TCTGGAGGGCCTTTCGGGGCACAGGCAGCAAGTGGA...AAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR GCA 90 bp TGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCAGAATCCACTTGCTaGCTGTGCCCCGAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: WCVSDTSVTIQSRSAPFLAESTC*LCPERP
Trigger: GGGCCTTTCGGGGCACAGGCAGCAAGTGGATTCTGC...AAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR CCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGTCGGAGCCTATCTGTTaGAAGCCCGACGGCATCTCG +
Preference number: 4 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGSEPIC*KPDGIS
Trigger: CGAGATGCCGTCGGGCTTCCAACAGATAGGCTCCGA...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp AAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGGTGGTGAGGGTGCCTaGAGGGATGGAGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: KLCHWCVSDTSVTIQSRSGGEGA*RDGAGS
Trigger: GGACCCAGCTCCATCCCTCCAGGCACCCTCACCACC...TGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp CACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCTCTCCCCCACGTACATaGGCACCAGCCCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: HWCVSDTSVTIQSRSAPFSPPRT*APALMS
Trigger: TGACATCAGGGCTGGTGCCCATGTACGTGGGGGAGA...GAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp CTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCATAACAATGGCCAGTTaGTTGAGCGTCCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LPCFDSVEQVVHQTDPKTITMAS*LSVPRA
Trigger: CGCCCTGGGGACGCTCAACCAACTGGCCATTGTTAT...GGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGATAACAATGGCCAGTTaGTTGAGCGTCCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: FHLATHGHILSCSLLPWKITMAS*LSVPRA
Trigger: CGCCCTGGGGACGCTCAACCAACTGGCCATTGTTAT...CTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAGCTTCAGACTCTTTCTaGCAGGCCCCTCGAGATTCT +
Preference number: 4 (lower is better)
Translates to: APFLALILWSRWSTKLTQASDSF*QAPRDS
Trigger: AGAATCTCGAGGGGCCTGCCAGAAAGAGTCTGAAGC...TTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp CAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCATTTACCTGGAGCAGGGACAGTaGCCGCTCACGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: QMPRAMPGTGSYNLLSIYLEQGQ*PLTLQL
Trigger: AAGCTGGAGCGTGAGCGGCCACTGTCCCTGCTCCAG...GTAAATGCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp CCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCCACCAGCTCCTATGGTaGCATAGGCAGGCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: PQSFSSGPKYSSSVLGFTHQLLW*HRQAGL
Trigger: TAGGCCAGCCTGCCTATGCCACCATAGGAGCTGGTG...GGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGGACGTAGCTCATGGCTaGAACTCGCTCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ASQFYQAAGILFHPEIIGDVAHG*NSLQQE
Trigger: CTCCTGCTGGAGCGAGTTCCAGCCATGAGCTACGTC...CCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCGACGTAGCTCATGGCTaGAACTCGCTCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PQSFSSGPKYSSSVLGFTDVAHG*NSLQQE
Trigger: CTCCTGCTGGAGCGAGTTCCAGCCATGAGCTACGTC...GGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp TTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGTGGAGACGTAGCTCATaGCTGGAACTCGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FHLATHGHILSCSLLPWKWRRSS*LELAPA
Trigger: TGCTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCA...CTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGCAAAGATGGCCACAATaGAGACGTAGCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: PALKERVSGGRQLRSGQTQRWPQ*RRSSWL
Trigger: CAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTG...CGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp TCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGTCCGGCAAAGATGGCCACAATaGAGACGTAGCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: SKREGVRWKAAEIWSNVRQRWPQ*RRSSWL
Trigger: CAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTG...CCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GGCCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCCCACGAAGCCAAAGATaGCCACAATGGAGACGTAGC +
Preference number: 4 (lower is better)
Translates to: GPIASATYWKPMPMMKLLPRSQR*PQWRRS
Trigger: GCTACGTCTCCATTGTGGCCATCTTTGGCTTCGTGG...GAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGTTGCTCGTCCAGTTaGAGAAACCAGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: APFLALILWSRWSTKLTQSCSSS*RNQPQP
Trigger: TGGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACT...TTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp CCCCTTTGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGAGTTGCTCGTCCAGTTaGAGAAACCAGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: PLCPESAWQEFSESPRLWSCSSS*RNQPQP
Trigger: TGGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACT...CCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCAAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGAGAGAGGGTGTCCGGTaGAAGGCAGCTGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGREGVR*KAAEIW
Trigger: CCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCT...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CCCCTTTGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGTTAGGGCTCCTTCTTaGCAGCCTTGGGAAACCATC +
Preference number: 4 (lower is better)
Translates to: PLCPESAWQEFSESPRLWVRAPS*QPWETI
Trigger: GATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC...CCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCAAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp AAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAGTACAACCGACCTTTaGTTTCTTCTCTCAATCCCC +
Preference number: 4 (lower is better)
Translates to: KAEPAVREVSPFPCRGQESTTDL*FLLSIP
Trigger: GGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT...CTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCACCATCTCTTCTGTTTTaGAGAATCGCTAGTAACTCA +
Preference number: 4 (lower is better)
Translates to: PFPCRGQERTPFARRGGSPSLLF*RIASNS
Trigger: TGAGTTACTAGCGATTCTCCAAAACAGAAGAGATGG...TGAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp GCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCCCATCTCTTCTGTTTTaGAGAATCGCTAGTAACTCA +
Preference number: 4 (lower is better)
Translates to: AWHPCCHVSSCVPGEECPPSLLF*RIASNS
Trigger: TGAGTTACTAGCGATTCTCCAAAACAGAAGAGATGG...GGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp TGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTAGGGCAAGACCCGCCTaGATCTGCTTTCCCGAGTCG +
Preference number: 4 (lower is better)
Translates to: WCVSDTSVTIQSRSAPFLRARPA*ICFPES
Trigger: CGACTCGGGAAAGCAGATCCAGGCGGGTCTTGCCCT...AAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR CCA 90 bp CACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCAAGACCCATGGTCTGTaGCTGGAGGAGTCCCTGACG +
Preference number: 4 (lower is better)
Translates to: HWCVSDTSVTIQSRSAPFKTHGL*LEESLT
Trigger: CGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTT...GAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp TGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTCCGCCAGGACATTGTTaGCCAGCATGGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: CVSDTSVTIQSRSAPFLAPPGHC*PAWPFS
Trigger: GGAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGG...AGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGGGAATCGTCCAAGGATaGGCATTTCATAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CPESAWQEFSESPRLWEEGIVQG*AFHRRQ
Trigger: CTGCCTCCTATGAAATGCTCATCCTTGGACGATTCC...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp TCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCGGAATCGTCCAAGGATaGGCATTTCATAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SAPFLALILWSRWSTKLTGIVQG*AFHRRQ
Trigger: CTGCCTCCTATGAAATGCTCATCCTTGGACGATTCC...GGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp AAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGGTGGGCTAGCTGTGTaGTGCCCACCTCTGGCCTAC +
Preference number: 4 (lower is better)
Translates to: KLCHWCVSDTSVTIQSRSGGLAV*CPPLAY
Trigger: GTAGGCCAGAGGTGGGCATCACACAGCTAGCCCACC...TGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp AGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAAACGTATATAAAGGTCCCGGAGTGACGTaGGAGGGCGGGCCCGATGGG +
Preference number: 4 (lower is better)
Translates to: STTDLWFLLSIPFSNVYKGPGVT*EGGPDG
Trigger: CCCATCGGGCCCGCCCTCGCACGTCACTCCGGGACC...TTTATATACGTTTGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp TTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCGGAAGGAGGAAATCATaGCGCCCACGGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: FLALILWSRWSTKLTQRPGRRKS*RPRKRW
Trigger: CCATCTTTTCCGTGGGCGGCATGATTTCCTCCTTCC...GGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp ATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCGGAAGGAGGAAATCATaGCGCCCACGGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: IQSRSAPFLALILWSRWSGRRKS*RPRKRW
Trigger: CCATCTTTTCCGTGGGCGGCATGATTTCCTCCTTCC...GGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp CTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGGAAGGAGGAAATCATaGCGCCCACGGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: LALILWSRWSTKLTQRPMGRRKS*RPRKRW
Trigger: CCATCTTTTCCGTGGGCGGCATGATTTCCTCCTTCC...CATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp TCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGGGAAGGAGGAAATCATaGCGCCCACGGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: SLPCFDSVEQVVHQTDPKGRRKS*RPRKRW
Trigger: CCATCTTTTCCGTGGGCGGCATGATTTCCTCCTTCC...CTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp TGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTAGCTGCTGGCTCAGCTaGAGCACGACCGCAATGATC +
Preference number: 4 (lower is better)
Translates to: CVSDTSVTIQSRSAPFLASCWLS*STTAMI
Trigger: GATCATTGCGGTCGTGCTGCAGCTGAGCCAGCAGCT...AGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp TATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCAGCTGCTGGCTCAGCTaGAGCACGACCGCAATGATC +
Preference number: 4 (lower is better)
Translates to: YATGAFQTPQLLSNLGQLSCWLS*STTAMI
Trigger: GATCATTGCGGTCGTGCTGCAGCTGAGCCAGCAGCT...GAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp TATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCAGGCTGGCCTACCCCTaGTGTCTCGAAGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: YATGAFQTPQLLSNLGQLRLAYP*CLEDAG
Trigger: ACCAGCATCTTCGAGACAGCAGGGGTAGGCCAGCCT...GAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp GTGCTGGGTTTCACCTCCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTAATACTCAAGTTCTGTaGTGGGTTTCACCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VLGFTSCSKREGVRWKAANTQVL*WVSPPA
Trigger: AGCAGGAGGTGAAACCCAGCACAGAACTTGAGTATT...AGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp TCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGTCCGGAAGAGAGGGTTAAAGTaGTGCAGAGGAAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SKREGVRWKAAEIWSNVRKRGLK*CRGKEG
Trigger: CCCTTCCTTTCCTCTGCAGCACTTTAACCCTCTCTT...CCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp ACCTGTCTTCCCTCCAATCCCCCTTCTCTAGCAGCGAAGAAGGTATTCTGGAGCCCAATTCTACCAGGCTaGAGGGATTCTTTTCCACCC +
Preference number: 4 (lower is better)
Translates to: TCLPSNPPSLAAKKVFWSPILPG*RDSFPP
Trigger: GGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGG...GCTCCAGAATACCTTCTTCGCTGCTAGAGAAGGGGGATTGGAGGGAAGACAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp CCCCTTTGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGTGAGTCCTTTTCCCTaGAGGGGTCAAGAGAGAACT +
Preference number: 4 (lower is better)
Translates to: PLCPESAWQEFSESPRLWVSPFP*RGQERT
Trigger: AGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCAC...CCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCAAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp CCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTTCAAAAGCCTGTGGATaGAGCACCCTTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PHSLRNILETHANDEVARSKACG*STLPGR
Trigger: CCTTCCTGGAAGGGTGCTGCATCCACAGGCTTTTGA...ACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR GCA 90 bp GAGTGCCCCTATCATGGGTTTCACTGCCCATCTGTGACATGGGCTGACACCTCCACCTCCACAATAGGATaGTTGTCTTCAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: ECPYHGFHCPSVTWADTSTSTIG*LSSAVT
Trigger: AGTCACTGCTGAAGACAAGCATCCTATTGTGGAGGT...GGAGGTGTCAGCCCATGTCACAGATGGGCAGTGAAACCCATGATAGGGGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp TCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCGTCAGCTCCCTTCCTTaGTTTGATTCTGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SAPFLALILWSRWSTKLTVSSLP*FDSVEQ
Trigger: CTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGAC...GGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp AGCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGTCGGAGCCTATCTGTTaGAAGCCCGACGGCATCTCG +
Preference number: 4 (lower is better)
Translates to: SFPILPGCRDSFPPGNNRSEPIC*KPDGIS
Trigger: CGAGATGCCGTCGGGCTTCCAACAGATAGGCTCCGA...CCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTGCTTCAGACTCTTTCTaGCAGGCCCCTCGAGATTCT +
Preference number: 4 (lower is better)
Translates to: PHSLRNILETHANDEVARASDSF*QAPRDS
Trigger: AGAATCTCGAGGGGCCTGCCAGAAAGAGTCTGAAGC...ACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp AGCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGCACCAGCTCCTATGGTaGCATAGGCAGGCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: SFPILPGCRDSFPPGNNRHQLLW*HRQAGL
Trigger: TAGGCCAGCCTGCCTATGCCACCATAGGAGCTGGTG...CCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp AGCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGCCACAGTCATCAGGATaGCACAGCCACACATGCCCG +
Preference number: 4 (lower is better)
Translates to: SFPILPGCRDSFPPGNNRPQSSG*HSHTCP
Trigger: CGGGCATGTGTGGCTGTGCCATCCTGATGACTGTGG...CCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp GCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTGACGTAGCTCATGGCTaGAACTCGCTCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: AFQTPQLLSNLGQLPSLLDVAHG*NSLQQE
Trigger: CTCCTGCTGGAGCGAGTTCCAGCCATGAGCTACGTC...AAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp CTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCCACGAAGCCAAAGATaGCCACAATGGAGACGTAGC +
Preference number: 4 (lower is better)
Translates to: LPCFDSVEQVVHQTDPKTPRSQR*PQWRRS
Trigger: GCTACGTCTCCATTGTGGCCATCTTTGGCTTCGTGG...GGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp AGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAAACGTATATAAAGCCGGGCGGGGTCCCTaGCTGAAGAGCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: STTDLWFLLSIPFSNVYKAGRGP*LKSSAT
Trigger: CGTGGCCGAGCTCTTCAGCCAGGGACCCCGCCCGGC...TTTATATACGTTTGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGAGTTGCTCGTCCAGTTaGAGAAACCAGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: LALILWSRWSTKLTQRPMSCSSS*RNQPQP
Trigger: TGGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACT...CATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGAAGGCAGCTGAGATCTaGTCAAACGTCCGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGKAAEI*SNVRPR
Trigger: TCGAGGCCGGACGTTTGACCAGATCTCAGCTGCCTT...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGAGGAGTCCAAGGTGGTaGGAAACTGGATTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: PALKERVSGGRQLRSGQTRSPRW*ETGFLV
Trigger: GACAAGAAATCCAGTTTCCCACCACCTTGGACTCCT...CGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR CCA 90 bp GCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGCCTTCTTGGCAGCCTTaGGAAACCATCGGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: ASQFYQAAGILFHPEIIGPSWQP*ETIGVE
Trigger: CTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGG...CCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCCCTTCTTGGCAGCCTTaGGAAACCATCGGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: PQSFSSGPKYSSSVLGFTPSWQP*ETIGVE
Trigger: CTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGG...GGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR CCA 90 bp GCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTAAGACCCATGGTCTGTaGCTGGAGGAGTCCCTGACG +
Preference number: 4 (lower is better)
Translates to: AFQTPQLLSNLGQLPSLLKTHGL*LEESLT
Trigger: CGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTT...AAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCAAGACCCATGGTCTGTaGCTGGAGGAGTCCCTGACG +
Preference number: 4 (lower is better)
Translates to: YATGAFQTPQLLSNLGQLKTHGL*LEESLT
Trigger: CGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTT...GAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGTTCCTTCCAAGCCACTaGGAGATGATACCAATGAGG +
Preference number: 4 (lower is better)
Translates to: CPESAWQEFSESPRLWEEFLPSH*EMIPMR
Trigger: CCTCATTGGTATCATCTCTCAGTGGCTTGGAAGGAA...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp CCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTGGAATCGTCCAAGGATaGGCATTTCATAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PHSLRNILETHANDEVARGIVQG*AFHRRQ
Trigger: CTGCCTCCTATGAAATGCTCATCCTTGGACGATTCC...ACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR TCA 90 bp GTATCATTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACAGGGCAGGTAGCACTGTaGGGCCCAGGAGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: VSFYSWSKVSYATGAFQTGQVAL*GPGAVA
Trigger: GGCCACTGCTCCTGGGCCTCACAGTGCTACCTGCCC...TGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAATGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp GGCCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCTCTGGTTTGTCCCACTaGGAAAGTCTAGACCTGTCT +
Preference number: 4 (lower is better)
Translates to: GPIASATYWKPMPMMKLLSGLSH*ESLDLS
Trigger: AGACAGGTCTAGACTTTCTCAGTGGGACAAACCAGA...GAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR TCA 90 bp TTTCCAGGCAGCCTTTCAAATCCCCTCTTTGCCTTAGTTGGTCAAAAGCCTGTGAAGATTCTGAGGCCTTaGGCTGAGGCAGGACAGAGG +
Preference number: 4 (lower is better)
Translates to: FPGSLSNPLFALVGQKPVKILRP*AEAGQR
Trigger: CCTCTGTCCTGCCTCAGCTCAAGGCCTCAGAATCTT...CACAGGCTTTTGACCAACTAAGGCAAAGAGGGGATTTGAAAGGCTGCCTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp ATATATACATTTAGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCACTGGAGCGCAGAACCTaGGGAGGCCGCGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: IYTFSTTDLWFLLSIPFSLERRT*GGRGGP
Trigger: GGGACCCCCGCGGCCTCCGCAGGTTCTGCGCTCCAG...TGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACTAAATGTATATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp CAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGCTGTCTCGAAGATaGTGGTCGAATAATAGAAAA +
Preference number: 4 (lower is better)
Translates to: QVVHQTDPKTHGLWLEESLLSRR*WSNNRK
Trigger: TTTTCTATTATTCGACCAGCATCTTCGAGACAGCAG...GGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp GCTGAGATCTGGTCAAACGTCCGGCCTCGAGTTTCAGGTACTCTTAAGAAGGTGCTGGGTTTCACCTCCTaGTCTAAAAGAGAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: AEIWSNVRPRVSGTLKKVLGFTS*SKREGV
Trigger: GACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAG...CACCTTCTTAAGAGTACCTGAAACTCGAGGCCGGACGTTTGACCAGATCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp AAAGATGGCCACAATGGAGACGTAGCTCATGGCTGGAACTCGCTCCAGCAGGAGAATACTCAAGTTCTGTaGTGGGTTTCACCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KDGHNGDVAHGWNSLQQENTQVL*WVSPPA
Trigger: AGCAGGAGGTGAAACCCAGCACAGAACTTGAGTATT...CTCCTGCTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCATTGTGGCCATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR GCA 90 bp CAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCTCAAAAGCCTGTGGATaGAGCACCCTTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QSFSSGPKYSSSVLGFTSSKACG*STLPGR
Trigger: CCTTCCTGGAAGGGTGCTGCATCCACAGGCTTTTGA...GGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR GCA 90 bp CTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCAGCTCCCTTCCTTaGTTTGATTCTGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LALILWSRWSTKLTQRPMVSSLP*FDSVEQ
Trigger: CTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGAC...CATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp TTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCGTCAGCTCCCTTCCTTaGTTTGATTCTGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: FLALILWSRWSTKLTQRPVSSLP*FDSVEQ
Trigger: CTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGAC...GGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGCGCCCACGGAAAAGATaGCCACGGAGAGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: FYSWSKVSYATGAFQTPQRPRKR*PRRGPR
Trigger: TCTGGGCCCTCTCCGTGGCCATCTTTTCCGTGGGCG...CTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTCCAAGCCCAGCACCTaGGCGATCAGAATGCCGATA +
Preference number: 4 (lower is better)
Translates to: VTIQSRSAPFLALILWSRSKPST*AIRMPI
Trigger: TATCGGCATTCTGATCGCCCAGGTGCTGGGCTTGGA...CCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTTCCAAGCCCAGCACCTaGGCGATCAGAATGCCGATA +
Preference number: 4 (lower is better)
Translates to: WCVSDTSVTIQSRSAPFLSKPST*AIRMPI
Trigger: TATCGGCATTCTGATCGCCCAGGTGCTGGGCTTGGA...AAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGGCTTCAGACTCTTTCTaGCAGGCCCCTCGAGATTCT +
Preference number: 4 (lower is better)
Translates to: ASQFYQAAGILFHPEIIGASDSF*QAPRDS
Trigger: AGAATCTCGAGGGGCCTGCCAGAAAGAGTCTGAAGC...CCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp CCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCGCTTCAGACTCTTTCTaGCAGGCCCCTCGAGATTCT +
Preference number: 4 (lower is better)
Translates to: PQSFSSGPKYSSSVLGFTASDSF*QAPRDS
Trigger: AGAATCTCGAGGGGCCTGCCAGAAAGAGTCTGAAGC...GGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp AGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCACCAGCTCCTATGGTaGCATAGGCAGGCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: SYATGAFQTPQLLSNLGQHQLLW*HRQAGL
Trigger: TAGGCCAGCCTGCCTATGCCACCATAGGAGCTGGTG...CTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp AGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCCACAGTCATCAGGATaGCACAGCCACACATGCCCG +
Preference number: 4 (lower is better)
Translates to: SYATGAFQTPQLLSNLGQPQSSG*HSHTCP
Trigger: CGGGCATGTGTGGCTGTGCCATCCTGATGACTGTGG...CTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGGAGACGTAGCTCATaGCTGGAACTCGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AFQTPQLLSNLGQLPSLLWRRSS*LELAPA
Trigger: TGCTGGAGCGAGTTCCAGCCATGAGCTACGTCTCCA...AAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GTCCTTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGAAGGTGGTGGGAAACTaGATTTCTTGTCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: VLPSCHTWAHTFLFPLALKVVGN*ISCLLS
Trigger: GGACAGGAGACAAGAAATCCAGTTTCCCACCACCTT...CAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GTCCTTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGCCATCTTGCCACACATaGGCACATACTTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: VLPSCHTWAHTFLFPLALPSCHT*AHTFLF
Trigger: GAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGG...CAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CCCCTTTGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGCCATCTTGCCACACATaGGCACATACTTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: PLCPESAWQEFSESPRLWPSCHT*AHTFLF
Trigger: GAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGG...CCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGGTTAGGGCTCCTTCTTaGCAGCCTTGGGAAACCATC +
Preference number: 4 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGVRAPS*QPWETI
Trigger: GATGGTTTCCCAAGGCTGCCAAGAAGGAGCCCTAAC...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGAGGGGTGAAGAGTTATaGTCCCTGTCTCAGCCCATC +
Preference number: 4 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGRGEEL*SLSQPI
Trigger: GATGGGCTGAGACAGGGACCATAACTCTTCACCCCT...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGAGCAATGCCCGGCACTaGCAGCTACAATTTATTGAG +
Preference number: 4 (lower is better)
Translates to: CPESAWQEFSESPRLWEESNARH*QLQFIE
Trigger: CTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCT...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp AGCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGTGCCCATCTGTGACATaGGCTGACACCTCCCTCACA +
Preference number: 4 (lower is better)
Translates to: SFPILPGCRDSFPPGNNRCPSVT*ADTSLT
Trigger: TGTGAGGGAGGTGTCAGCCCATGTCACAGATGGGCA...CCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp TCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCCTACCGCAACATACTaGAAACCCATGCCAATGATG +
Preference number: 4 (lower is better)
Translates to: SAPFLALILWSRWSTKLTPTATY*KPMPMM
Trigger: CATCATTGGCATGGGTTTCCAGTATGTTGCGGTAGG...GGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTTGTGATGCCCACCTCTaGCCTACGGTGTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VSYATGAFQTPQLLSNLGCDAHL*PTVWEA
Trigger: AGCCTCCCACACCGTAGGCCAGAGGTGGGCATCACA...ACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAAATTCTGTGGAGCAGGTaGTCCACCAAACTGACCCAA +
Preference number: 4 (lower is better)
Translates to: SRSAPFLALILWSRWSTKILWSR*STKLTQ
Trigger: TTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAAT...TTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp CCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTTTCCTTCCAAGCCACTaGGAGATGATACCAATGAGG +
Preference number: 4 (lower is better)
Translates to: PHSLRNILETHANDEVARFLPSH*EMIPMR
Trigger: CCTCATTGGTATCATCTCTCAGTGGCTTGGAAGGAA...ACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR TCA 90 bp GTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCCGCCAGGACATTGTTaGCCAGCATGGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: VSYATGAFQTPQLLSNLGPPGHC*PAWPFS
Trigger: GGAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGG...ACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp TTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTCGAAACACTGCCCGTaGGCGAAGACGGACGGACAG +
Preference number: 4 (lower is better)
Translates to: FYSWSKVSYATGAFQTPQSKHCP*AKTDGQ
Trigger: CTGTCCGTCCGTCTTCGCTCACGGGCAGTGTTTCGA...CTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR TCA 90 bp TATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCTCCCTTCCTTGCTTTaGTTCTGTGGAGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: YATGAFQTPQLLSNLGQLLPSLL*FCGAGG
Trigger: ACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAG...GAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp CCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCCTGGGTTTCACCTCCTaGTCTAAAAGAGAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: PQSFSSGPKYSSSVLGFTLGFTS*SKREGV
Trigger: GACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAG...GGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGAATACTCAAGTTCTGTaGTGGGTTTCACCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CPESAWQEFSESPRLWEENTQVL*WVSPPA
Trigger: AGCAGGAGGTGAAACCCAGCACAGAACTTGAGTATT...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp AGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTCCAGTTCCAATTCTACCAGGCTaGAGGGATTCTTTTCCACCC +
Preference number: 4 (lower is better)
Translates to: SLRNILETHANDEVARPVPILPG*RDSFPP
Trigger: GGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGG...AACTGGACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp CAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTCCGTGAGTCCTTTTCCCTaGAGGGGTCAAGAGAGAACT +
Preference number: 4 (lower is better)
Translates to: QSFSSGPKYSSSVLGFTSVSPFP*RGQERT
Trigger: AGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCAC...GGAGGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR GCA 90 bp AGCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGTCAAAAGCCTGTGGATaGAGCACCCTTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SFPILPGCRDSFPPGNNRSKACG*STLPGR
Trigger: CCTTCCTGGAAGGGTGCTGCATCCACAGGCTTTTGA...CCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp TTTCCAGGCAGCCTTTCAAATCCCCTCTTTGCCTTAGTTGGTCAAAAGCCTGTGAAATGCCAAGAGCAATaGCCGGCACTGGCAGCTACA +
Preference number: 4 (lower is better)
Translates to: FPGSLSNPLFALVGQKPVKCQEQ*PALAAT
Trigger: TGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTT...CACAGGCTTTTGACCAACTAAGGCAAAGAGGGGATTTGAAAGGCTGCCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp AAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAAGACCCGCCTGGATCTaGTTTCCCGAGTCGGATCGA +
Preference number: 4 (lower is better)
Translates to: KLCHWCVSDTSVTIQSRSRPAWI*FPESDR
Trigger: TCGATCCGACTCGGGAAAGCAGATCCAGGCGGGTCT...TGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR GCA 90 bp AGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGTTATGCCACTGGTaGGTTTCAGACACCTCAGTT +
Preference number: 4 (lower is better)
Translates to: SSLPCFDSVEQVVHQTDPKLCHW*VSDTSV
Trigger: AACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT...TGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp GCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCAAGTTATGCCACTGGTaGGTTTCAGACACCTCAGTT +
Preference number: 4 (lower is better)
Translates to: ALILWSRWSTKLTQRPMVKLCHW*VSDTSV
Trigger: AACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT...GACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp AGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAAACGTATATAAAGGACCCGGAGAGCAGTaGGGCTCCCGCGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: STTDLWFLLSIPFSNVYKGPGEQ*GSRGSG
Trigger: ACCAGATCCGCGGGAGCCCCACTGCTCTCCGGGTCC...TTTATATACGTTTGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp ATATATACATTTAGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCACGAGGGCGGGCCCGATaGGACCCACAGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: IYTFSTTDLWFLLSIPFSRGRAR*DPQPQA
Trigger: GGCTTGTGGCTGTGGGTCCCATCGGGCCCGCCCTCG...TGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACTAAATGTATATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp AAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCATCGGAGCCTATCTGTTaGAAGCCCGACGGCATCTCG +
Preference number: 4 (lower is better)
Translates to: KLCHWCVSDTSVTIQSRSSEPIC*KPDGIS
Trigger: CGAGATGCCGTCGGGCTTCCAACAGATAGGCTCCGA...TGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571308.5
ENST00000671706.1
CDS-3UTR CCA 90 bp GTATCATTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACAGGTGGTGAGGGTGCCTaGAGGGATGGAGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: VSFYSWSKVSYATGAFQTGGEGA*RDGAGS
Trigger: GGACCCAGCTCCATCCCTCCAGGCACCCTCACCACC...TGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAATGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp AAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCATCTCCCCCACGTACATaGGCACCAGCCCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: KLCHWCVSDTSVTIQSRSSPPRT*APALMS
Trigger: TGACATCAGGGCTGGTGCCCATGTACGTGGGGGAGA...TGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp CAGCCCATCCTCAAGTACCTCCACAATAGGATGCTTGTCTTCAGCAGTGACTTTGCTTCAGACTCTTTCTaGCAGGCCCCTCGAGATTCT +
Preference number: 4 (lower is better)
Translates to: QPILKYLHNRMLVFSSDFASDSF*QAPRDS
Trigger: AGAATCTCGAGGGGCCTGCCAGAAAGAGTCTGAAGC...AAAGTCACTGCTGAAGACAAGCATCCTATTGTGGAGGTACTTGAGGATGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp AGCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGCTTCAGACTCTTTCTaGCAGGCCCCTCGAGATTCT +
Preference number: 4 (lower is better)
Translates to: SFPILPGCRDSFPPGNNRASDSF*QAPRDS
Trigger: AGAATCTCGAGGGGCCTGCCAGAAAGAGTCTGAAGC...CCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp TTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGCCACACCAGCTCCTATaGTGGCATAGGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FYSWSKVSYATGAFQTPQPHQLL*WHRQAG
Trigger: GCCAGCCTGCCTATGCCACCATAGGAGCTGGTGTGG...CTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp AAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCACCACAGTCATCAGGATaGCACAGCCACACATGCCCG +
Preference number: 4 (lower is better)
Translates to: KLCHWCVSDTSVTIQSRSPQSSG*HSHTCP
Trigger: CGGGCATGTGTGGCTGTGCCATCCTGATGACTGTGG...TGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp CACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCAAAGATGGCCACAATaGAGACGTAGCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: HWCVSDTSVTIQSRSAPFQRWPQ*RRSSWL
Trigger: CAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTG...GAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGCAAAGATGGCCACAATaGAGACGTAGCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGQRWPQ*RRSSWL
Trigger: CAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTG...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CCA 90 bp ATTCTGCAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCAGTTGCTCGTCCAGTTaGAGAAACCAGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: ILQMPRAMPGTGSYNLLSSCSSS*RNQPQP
Trigger: TGGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACT...GCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTGCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CCA 90 bp GCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGTCCTGCTCTCTGCTCTaGTTTGTCCCACTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ASQFYQAAGILFHPEIIGSCSLL*FVPLRK
Trigger: CTTTCTCAGTGGGACAAACCAGAGCAGAGAGCAGGA...CCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp TTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGAGGAGTCCAAGGTGGTaGGAAACTGGATTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: FHLATHGHILSCSLLPWKRSPRW*ETGFLV
Trigger: GACAAGAAATCCAGTTTCCCACCACCTTGGACTCCT...CTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp TTTCCAGGCAGCCTTTCAAATCCCCTCTTTGCCTTAGTTGGTCAAAAGCCTGTGGAAAGTCCCAGATTGTaGGAGGAGTCCAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FPGSLSNPLFALVGQKPVESPRL*EESKVV
Trigger: CACCACCTTGGACTCCTCCCACAATCTGGGACTTTC...CACAGGCTTTTGACCAACTAAGGCAAAGAGGGGATTTGAAAGGCTGCCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp CTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCCTACCGCAACATACTaGAAACCCATGCCAATGATG +
Preference number: 4 (lower is better)
Translates to: LPCFDSVEQVVHQTDPKTPTATY*KPMPMM
Trigger: CATCATTGGCATGGGTTTCCAGTATGTTGCGGTAGG...GGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCCTTGCTTTGATTCTGTaGAGCAGGTGGTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: FLALILWSRWSTKLTQRPLALIL*SRWSTK
Trigger: TTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAG...GGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp CCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTCTGTGCTGGGTTTCACCTTCCTTCCAAGCCACTaGGAGATGATACCAATGAGG +
Preference number: 4 (lower is better)
Translates to: PQSFSSGPKYSSSVLGFTFLPSH*EMIPMR
Trigger: CCTCATTGGTATCATCTCTCAGTGGCTTGGAAGGAA...GGTGAAACCCAGCACAGAACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR TCA 90 bp CACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCTTCCTTCCAAGCCACTaGGAGATGATACCAATGAGG +
Preference number: 4 (lower is better)
Translates to: HWCVSDTSVTIQSRSAPFFLPSH*EMIPMR
Trigger: CCTCATTGGTATCATCTCTCAGTGGCTTGGAAGGAA...GAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp TTTCCAGGCAGCCTTTCAAATCCCCTCTTTGCCTTAGTTGGTCAAAAGCCTGTGGGAATCGTCCAAGGATaGGCATTTCATAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FPGSLSNPLFALVGQKPVGIVQG*AFHRRQ
Trigger: CTGCCTCCTATGAAATGCTCATCCTTGGACGATTCC...CACAGGCTTTTGACCAACTAAGGCAAAGAGGGGATTTGAAAGGCTGCCTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR TCA 90 bp GTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGGGAATCGTCCAAGGATaGGCATTTCATAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VTIQSRSAPFLALILWSRGIVQG*AFHRRQ
Trigger: CTGCCTCCTATGAAATGCTCATCCTTGGACGATTCC...CCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp AGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTCCAGTTGTGGCAAGAATTCAGTaGAAGTCCCAGATTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SLRNILETHANDEVARPVVARIQ*KSQIVG
Trigger: TCCCACAATCTGGGACTTTCACTGAATTCTTGCCAC...AACTGGACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR TCA 90 bp CAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCATTTACCTAGTAACTCACTGTTaGAGGTGGGGAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: QMPRAMPGTGSYNLLSIYLVTHC*RWGGGD
Trigger: ATCCCCTCCTCCCCACCTTCAACAGTGAGTTACTAG...GTAAATGCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR TCA 90 bp GGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGCTCCCTTCCTTGCTTTaGTTCTGTGGAGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GKLCHWCVSDTSVTIQSRLPSLL*FCGAGG
Trigger: ACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAG...CCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp CTCCACCAACAACACCGAGACCAAGGTGAAGACTGTGTTGACCACACCAGCTCCCTGCTGTCTCGAAGATaGTGGTCGAATAATAGAAAA +
Preference number: 4 (lower is better)
Translates to: LHQQHRDQGEDCVDHTSSLLSRR*WSNNRK
Trigger: TTTTCTATTATTCGACCAGCATCTTCGAGACAGCAG...GGAGCTGGTGTGGTCAACACAGTCTTCACCTTGGTCTCGGTGTTGTTGGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR GCA 90 bp GCTGAGATCTGGTCAAACGTCCGGCCTCGAGTTTCAGGTACTCTTAAGAAGGTGAATACTCAAGTTCTGTaGTGGGTTTCACCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AEIWSNVRPRVSGTLKKVNTQVL*WVSPPA
Trigger: AGCAGGAGGTGAAACCCAGCACAGAACTTGAGTATT...CACCTTCTTAAGAGTACCTGAAACTCGAGGCCGGACGTTTGACCAGATCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp TTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGAGACCCGCCTGGATCTaGTTTCCCGAGTCGGATCGA +
Preference number: 4 (lower is better)
Translates to: FYSWSKVSYATGAFQTPQRPAWI*FPESDR
Trigger: TCGATCCGACTCGGGAAAGCAGATCCAGGCGGGTCT...CTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR GCA 90 bp CTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGAAGTTATGCCACTGGTaGGTTTCAGACACCTCAGTT +
Preference number: 4 (lower is better)
Translates to: LALILWSRWSTKLTQRPMKLCHW*VSDTSV
Trigger: AACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT...CATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTTCCAAGCCCAGCACCTaGGCGATCAGAATGCCGATA +
Preference number: 4 (lower is better)
Translates to: VSYATGAFQTPQLLSNLGSKPST*AIRMPI
Trigger: TATCGGCATTCTGATCGCCCAGGTGCTGGGCTTGGA...ACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp AGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGGCTTCAGACTCTTTCTaGCAGGCCCCTCGAGATTCT +
Preference number: 4 (lower is better)
Translates to: SYATGAFQTPQLLSNLGQASDSF*QAPRDS
Trigger: AGAATCTCGAGGGGCCTGCCAGAAAGAGTCTGAAGC...CTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GTATCATTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACACTGGAGCAGGGACAGTaGCCGCTCACGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: VSFYSWSKVSYATGAFQTLEQGQ*PLTLQL
Trigger: AAGCTGGAGCGTGAGCGGCCACTGTCCCTGCTCCAG...TGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAATGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp AGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCCACGAAGCCAAAGATaGCCACAATGGAGACGTAGC +
Preference number: 4 (lower is better)
Translates to: SYATGAFQTPQLLSNLGQPRSQR*PQWRRS
Trigger: GCTACGTCTCCATTGTGGCCATCTTTGGCTTCGTGG...CTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TTTCCAGGCAGCCTTTCAAATCCCCTCTTTGCCTTAGTTGGTCAAAAGCCTGTGTCCTGCTCTCTGCTCTaGTTTGTCCCACTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: FPGSLSNPLFALVGQKPVSCSLL*FVPLRK
Trigger: CTTTCTCAGTGGGACAAACCAGAGCAGAGAGCAGGA...CACAGGCTTTTGACCAACTAAGGCAAAGAGGGGATTTGAAAGGCTGCCTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp AGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTCCAGTTAAGGTGGTGGGAAACTaGATTTCTTGTCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SLRNILETHANDEVARPVKVVGN*ISCLLS
Trigger: GGACAGGAGACAAGAAATCCAGTTTCCCACCACCTT...AACTGGACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR CCA 90 bp CCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTAGTACAACCGACCTTTaGTTTCTTCTCTCAATCCCC +
Preference number: 4 (lower is better)
Translates to: PHSLRNILETHANDEVARSTTDL*FLLSIP
Trigger: GGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT...ACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR CCA 90 bp TGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTATTCTGTGGAGCAGGTaGTCCACCAAACTGACCCAA +
Preference number: 4 (lower is better)
Translates to: WCVSDTSVTIQSRSAPFLILWSR*STKLTQ
Trigger: TTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAAT...AAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGATTCTGTGGAGCAGGTaGTCCACCAAACTGACCCAA +
Preference number: 4 (lower is better)
Translates to: VTIQSRSAPFLALILWSRILWSR*STKLTQ
Trigger: TTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAAT...CCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp TATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCTTCCTTCCAAGCCACTaGGAGATGATACCAATGAGG +
Preference number: 4 (lower is better)
Translates to: YATGAFQTPQLLSNLGQLFLPSH*EMIPMR
Trigger: CCTCATTGGTATCATCTCTCAGTGGCTTGGAAGGAA...GAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp GTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCTCCCTTCCTTGCTTTaGTTCTGTGGAGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: VSYATGAFQTPQLLSNLGLPSLL*FCGAGG
Trigger: ACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAG...ACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp ATATATACATTTAGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCATGGCTCTCCCACCCCTaGCTGGCCCCTCAGTCGTTC +
Preference number: 4 (lower is better)
Translates to: IYTFSTTDLWFLLSIPFSWLSHP*LAPQSF
Trigger: GAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCCA...TGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACTAAATGTATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp CAGCCCATCCTCAAGTACCTCCACAATAGGATGCTTGTCTTCAGCAGTGACTTTAAGAGAGGGTTAAAGTaGTGCAGAGGAAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: QPILKYLHNRMLVFSSDFKRGLK*CRGKEG
Trigger: CCCTTCCTTTCCTCTGCAGCACTTTAACCCTCTCTT...AAAGTCACTGCTGAAGACAAGCATCCTATTGTGGAGGTACTTGAGGATGGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp GGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGGTCAGCTCCCTTCCTTaGTTTGATTCTGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GKLCHWCVSDTSVTIQSRVSSLP*FDSVEQ
Trigger: CTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGAC...CCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp AAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCACCACGAAGCCAAAGATaGCCACAATGGAGACGTAGC +
Preference number: 4 (lower is better)
Translates to: KLCHWCVSDTSVTIQSRSPRSQR*PQWRRS
Trigger: GCTACGTCTCCATTGTGGCCATCTTTGGCTTCGTGG...TGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp AAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAAGTTGCTCGTCCAGTTaGAGAAACCAGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: KLCHWCVSDTSVTIQSRSSCSSS*RNQPQP
Trigger: TGGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACT...TGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGAGTACAACCGACCTTTaGTTTCTTCTCTCAATCCCC +
Preference number: 4 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGSTTDL*FLLSIP
Trigger: GGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp TGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTCCTACCGCAACATACTaGAAACCCATGCCAATGATG +
Preference number: 4 (lower is better)
Translates to: CVSDTSVTIQSRSAPFLAPTATY*KPMPMM
Trigger: CATCATTGGCATGGGTTTCCAGTATGTTGCGGTAGG...AGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGATTCTGTGGAGCAGGTaGTCCACCAAACTGACCCAA +
Preference number: 4 (lower is better)
Translates to: GKLCHWCVSDTSVTIQSRILWSR*STKLTQ
Trigger: TTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAAT...CCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTCTTGCTTTGATTCTGTaGAGCAGGTGGTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: AFQTPQLLSNLGQLPSLLLALIL*SRWSTK
Trigger: TTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAG...AAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTCTTGCTTTGATTCTGTaGAGCAGGTGGTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: CVSDTSVTIQSRSAPFLALALIL*SRWSTK
Trigger: TTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAG...AGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTCTTGCTTTGATTCTGTaGAGCAGGTGGTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: WCVSDTSVTIQSRSAPFLLALIL*SRWSTK
Trigger: TTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAG...AAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGGGTAAGTTATGCCACTaGTGCGTTTCAGACACCTCA +
Preference number: 4 (lower is better)
Translates to: VTIQSRSAPFLALILWSRGKLCH*CVSDTS
Trigger: TGAGGTGTCTGAAACGCACCAGTGGCATAACTTACC...CCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp AGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAAACGTATATAAATCTGAGGCCTTGAGCTaGGGCAGGACAGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: STTDLWFLLSIPFSNVYKSEALS*GRTEGG
Trigger: TCCTCCCTCTGTCCTGCCTCAGCTCAAGGCCTCAGA...TTTATATACGTTTGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp GCTGAGATCTGGTCAAACGTCCGGCCTCGAGTTTCAGGTACTCTTAAGAAGGTGCTGCTGTCTCGAAGATaGTGGTCGAATAATAGAAAA +
Preference number: 4 (lower is better)
Translates to: AEIWSNVRPRVSGTLKKVLLSRR*WSNNRK
Trigger: TTTTCTATTATTCGACCAGCATCTTCGAGACAGCAG...CACCTTCTTAAGAGTACCTGAAACTCGAGGCCGGACGTTTGACCAGATCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CCA 90 bp TTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGGCTTCAGACTCTTTCTaGCAGGCCCCTCGAGATTCT +
Preference number: 4 (lower is better)
Translates to: FYSWSKVSYATGAFQTPQASDSF*QAPRDS
Trigger: AGAATCTCGAGGGGCCTGCCAGAAAGAGTCTGAAGC...CTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GTATCATTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACAGACGTAGCTCATGGCTaGAACTCGCTCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VSFYSWSKVSYATGAFQTDVAHG*NSLQQE
Trigger: CTCCTGCTGGAGCGAGTTCCAGCCATGAGCTACGTC...TGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAATGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGCCACGAAGCCAAAGATaGCCACAATGGAGACGTAGC +
Preference number: 4 (lower is better)
Translates to: FYSWSKVSYATGAFQTPQPRSQR*PQWRRS
Trigger: GCTACGTCTCCATTGTGGCCATCTTTGGCTTCGTGG...CTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp TTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGAGTTGCTCGTCCAGTTaGAGAAACCAGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: FYSWSKVSYATGAFQTPQSCSSS*RNQPQP
Trigger: TGGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACT...CTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGGGTAAGTTATGCCACTaGTGCGTTTCAGACACCTCA +
Preference number: 4 (lower is better)
Translates to: GKLCHWCVSDTSVTIQSRGKLCH*CVSDTS
Trigger: TGAGGTGTCTGAAACGCACCAGTGGCATAACTTACC...CCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp AAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCATTCCTTCCAAGCCACTaGGAGATGATACCAATGAGG +
Preference number: 4 (lower is better)
Translates to: KLCHWCVSDTSVTIQSRSFLPSH*EMIPMR
Trigger: CCTCATTGGTATCATCTCTCAGTGGCTTGGAAGGAA...TGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp ATATATACATTTAGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCATCTGAGGCCTTGAGCTaGGGCAGGACAGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: IYTFSTTDLWFLLSIPFSSEALS*GRTEGG
Trigger: TCCTCCCTCTGTCCTGCCTCAGCTCAAGGCCTCAGA...TGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACTAAATGTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp CACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTGCTGTCTCGAAGATaGTGGTCGAATAATAGAAAA +
Preference number: 4 (lower is better)
Translates to: HWCVSDTSVTIQSRSAPFLLSRR*WSNNRK
Trigger: TTTTCTATTATTCGACCAGCATCTTCGAGACAGCAG...GAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp AGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTCCAGTTCTGCTGTCTCGAAGATaGTGGTCGAATAATAGAAAA +
Preference number: 4 (lower is better)
Translates to: SLRNILETHANDEVARPVLLSRR*WSNNRK
Trigger: TTTTCTATTATTCGACCAGCATCTTCGAGACAGCAG...AACTGGACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR GCA 90 bp GGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGAAGTTATGCCACTGGTaGGTTTCAGACACCTCAGTT +
Preference number: 4 (lower is better)
Translates to: GKLCHWCVSDTSVTIQSRKLCHW*VSDTSV
Trigger: AACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT...CCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GTATCATTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACAATAACAATGGCCAGTTaGTTGAGCGTCCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: VSFYSWSKVSYATGAFQTITMAS*LSVPRA
Trigger: CGCCCTGGGGACGCTCAACCAACTGGCCATTGTTAT...TGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAATGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp GTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCCTACCGCAACATACTaGAAACCCATGCCAATGATG +
Preference number: 4 (lower is better)
Translates to: VSYATGAFQTPQLLSNLGPTATY*KPMPMM
Trigger: CATCATTGGCATGGGTTTCCAGTATGTTGCGGTAGG...ACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR TCA 90 bp ATATATACATTTAGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCATTCACTGCCCATCTGTaGCATGGGCTGACACCTCCC +
Preference number: 4 (lower is better)
Translates to: IYTFSTTDLWFLLSIPFSFTAHL*HGLTPP
Trigger: GGGAGGTGTCAGCCCATGTCACAGATGGGCAGTGAA...TGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACTAAATGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR GCA 90 bp TTTCCAGGCAGCCTTTCAAATCCCCTCTTTGCCTTAGTTGGTCAAAAGCCTGTGCTGCTGTCTCGAAGATaGTGGTCGAATAATAGAAAA +
Preference number: 4 (lower is better)
Translates to: FPGSLSNPLFALVGQKPVLLSRR*WSNNRK
Trigger: TTTTCTATTATTCGACCAGCATCTTCGAGACAGCAG...CACAGGCTTTTGACCAACTAAGGCAAAGAGGGGATTTGAAAGGCTGCCTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp TGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTCTGCTGTCTCGAAGATaGTGGTCGAATAATAGAAAA +
Preference number: 4 (lower is better)
Translates to: WCVSDTSVTIQSRSAPFLLLSRR*WSNNRK
Trigger: TTTTCTATTATTCGACCAGCATCTTCGAGACAGCAG...AAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp ATATATACATTTAGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAGACGTAGCTCATGGCTaGAACTCGCTCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: IYTFSTTDLWFLLSIPFSDVAHG*NSLQQE
Trigger: CTCCTGCTGGAGCGAGTTCCAGCCATGAGCTACGTC...TGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACTAAATGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp AGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAAACGTATATAAAGCCGTCCTTCCATCTTaGCACACATGGGCACATACT +
Preference number: 4 (lower is better)
Translates to: STTDLWFLLSIPFSNVYKAVLPS*HTWAHT
Trigger: AGTATGTGCCCATGTGTGGCAAGATGGAAGGACGGC...TTTATATACGTTTGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GTATCATTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACACAAAGATGGCCACAATaGAGACGTAGCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: VSFYSWSKVSYATGAFQTQRWPQ*RRSSWL
Trigger: CAGCCATGAGCTACGTCTCCATTGTGGCCATCTTTG...TGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAATGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp ATATATACATTTAGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAAAGGCAGCTGAGATCTaGTCAAACGTCCGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: IYTFSTTDLWFLLSIPFSKAAEI*SNVRPR
Trigger: TCGAGGCCGGACGTTTGACCAGATCTCAGCTGCCTT...TGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACTAAATGTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp ATATATACATTTAGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCACCTTCTTGGCAGCCTTaGGAAACCATCGGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: IYTFSTTDLWFLLSIPFSPSWQP*ETIGVE
Trigger: CTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGG...TGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACTAAATGTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp ATATATACATTTAGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAGGAAGGAGGAAATCATaGCGCCCACGGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: IYTFSTTDLWFLLSIPFSGRRKS*RPRKRW
Trigger: CCATCTTTTCCGTGGGCGGCATGATTTCCTCCTTCC...TGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACTAAATGTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp GTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCTGCTGTCTCGAAGATaGTGGTCGAATAATAGAAAA +
Preference number: 4 (lower is better)
Translates to: VSYATGAFQTPQLLSNLGLLSRR*WSNNRK
Trigger: TTTTCTATTATTCGACCAGCATCTTCGAGACAGCAG...ACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR GCA 90 bp AGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAAACGTATATAAACCAATTCTACCAGGCTaGAGGGATTCTTTTCCACCC +
Preference number: 4 (lower is better)
Translates to: STTDLWFLLSIPFSNVYKPILPG*RDSFPP
Trigger: GGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGG...TTTATATACGTTTGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR GCA 90 bp ATATATACATTTAGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAACCTGGGAGACAGCTTaGAGTGAAGCAAGATCACGC +
Preference number: 4 (lower is better)
Translates to: IYTFSTTDLWFLLSIPFSTWETA*SEARSR
Trigger: GCGTGATCTTGCTTCACTGCAAGCTGTCTCCCAGGT...TGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACTAAATGTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CCA 90 bp GTATCATTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACAGGTAAGTTATGCCACTaGTGCGTTTCAGACACCTCA +
Preference number: 4 (lower is better)
Translates to: VSFYSWSKVSYATGAFQTGKLCH*CVSDTS
Trigger: TGAGGTGTCTGAAACGCACCAGTGGCATAACTTACC...TGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAATGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CCA 90 bp AGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAAACGTATATAAAAGGAGTCCAAGGTGGTaGGAAACTGGATTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: STTDLWFLLSIPFSNVYKRSPRW*ETGFLV
Trigger: GACAAGAAATCCAGTTTCCCACCACCTTGGACTCCT...TTTATATACGTTTGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS CCA 90 bp CGGAGGCCGCGGGGGTCCCGGAGTGACGTGCGAGGGCGGGCCCGATaGGACCCACAGCCACAAGCCAAGGACCCGGAGAGCAGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: RRPRGSRSDVRGRAR*DPQPQAKDPESSGA
Trigger: AGCCCCACTGCTCTCCGGGTCCTTGGCTTGTGGCTGTGGGTCCCATCGGGCCCGCCCTCGCACGTCACTCCGGGACCCCCGCGGCCTCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000571308.5
ENST00000572485.5
ENST00000671706.1
ENST00000672821.1
ENST00000673224.1
CDS GCA 90 bp AGAACCGATCCTGGAGTCTCTGACTCCGGCCTGGAGCGCAGAACCTaGGGAGGCCGCGGGGGTCCCGGAGTGACGTGCGAGGGCGGGCCC +
Preference number: 5 (lower is better)
Translates to: RTDPGVSDSGLERRT*GGRGGPGVTCEGGP
Trigger: GGGCCCGCCCTCGCACGTCACTCCGGGACCCCCGCGGCCTCCGCAGGTTCTGCGCTCCAGGCCGGAGTCAGAGACTCCAGGATCGGTTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000571308.5
ENST00000572485.5
ENST00000671706.1
ENST00000672821.1
ENST00000673224.1
CDS TCA 90 bp GGGTGGGGGCCCACGGAGAGCCTCCGGTCCTCGAAACACTGCCCGTaGGCGAAGACGGACGGACAGCTCCCGGAGGGCAAGACCCGCCTG +
Preference number: 5 (lower is better)
Translates to: GWGPTESLRSSKHCP*AKTDGQLPEGKTRL
Trigger: CAGGCGGGTCTTGCCCTCCGGGAGCTGTCCGTCCGTCTTCGCTCACGGGCAGTGTTTCGAGGACCGGAGGCTCTCCGTGGGCCCCCACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS CCA 90 bp GTCATCAGGATGGCACAGCCACACATGCCCGCCAGGCCCAGGAGATaGAGCGTCCGGCGCCCCGCCCGCTCCACCAACAACACCTCCGGG +
Preference number: 5 (lower is better)
Translates to: VIRMAQPHMPARPRR*SVRRPARSTNNTSG
Trigger: CCCGGAGGTGTTGTTGGTGGAGCGGGCGGGGCGCCGGACGCTCCATCTCCTGGGCCTGGCGGGCATGTGTGGCTGTGCCATCCTGATGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS CCA 90 bp CGATTCCGGAGCGCCGCGCCGCCTACTAGGCAAGGGGGTGAACCCTaGCTCGCAGAATCCACTTGCTGCCTGTGCCCCGAAAGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RFRSAAPPTRQGGEP*LAESTCCLCPERPS
Trigger: GGAGGGCCTTTCGGGGCACAGGCAGCAAGTGGATTCTGCGAGCCAGGGTTCACCCCCTTGCCTAGTAGGCGGCGCGGCGCTCCGGAATCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS GCA 90 bp CGAAGACGGACGGACAGCTCCCGGAGGGCAAGACCCGCCTGGATCTaGTTTCCCGAGTCGGATCGAGGGCAGGGTGTCCCCGATTCCGGA +
Preference number: 5 (lower is better)
Translates to: RRRTDSSRRARPAWI*FPESDRGQGVPDSG
Trigger: TCCGGAATCGGGGACACCCTGCCCTCGATCCGACTCGGGAAAGCAGATCCAGGCGGGTCTTGCCCTCCGGGAGCTGTCCGTCCGTCTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS CCA 90 bp CGTGAGCGAAGACGGACGGACAGCTCCCGGAGGGCAAGACCCGCCTaGATCTGCTTTCCCGAGTCGGATCGAGGGCAGGGTGTCCCCGAT +
Preference number: 5 (lower is better)
Translates to: RERRRTDSSRRARPA*ICFPESDRGQGVPD
Trigger: ATCGGGGACACCCTGCCCTCGATCCGACTCGGGAAAGCAGATCCAGGCGGGTCTTGCCCTCCGGGAGCTGTCCGTCCGTCTTCGCTCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR CAA 90 bp CGGGGTAGAGCCCCAAGCCTAGAGGCGGGAGCCTGCCGTCCTTCCATCTTGCCACAGGGCCTGGCATCCTaGCTGCCATGTCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: RGRAPSLEAGACRPSILPQGLAS*LPCLQL
Trigger: CAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTG...TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAGGCTTGGGGCTCTACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CAA 90 bp CCCTGGAAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTACAATGGCCAGTTGGTaGAGCGTCCCCAGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: PWKAEPAVREVSPFPCRGTMASW*SVPRAP
Trigger: GGGCGCCCTGGGGACGCTCAACCAACTGGCCATTGT...ACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCAGCACCGCCAGGACATaGTTGACCAGCATGGCCCTT +
Preference number: 5 (lower is better)
Translates to: AEERKGSLGRVERAGSPTSTART*LTSMAL
Trigger: AAGGGCCATGCTGGTCAACAATGTCCTGGCGGTGCT...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CAA 90 bp GTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGACGACAATGGCCAGTTGGTaGAGCGTCCCCAGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: VHQTDPKTHGLWLEESLTTMASW*SVPRAP
Trigger: GGGCGCCCTGGGGACGCTCAACCAACTGGCCATTGT...CGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp AAGGCTGAGCCTGCAGTGAGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGACAATGGCCAGTTGGTaGAGCGTCCCCAGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: KAEPAVREVSPFPCRGQETMASW*SVPRAP
Trigger: GGGCGCCCTGGGGACGCTCAACCAACTGGCCATTGT...CTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCTCACTGCAGGCTCAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCGATAACAATGGCCAGTaGGTTGAGCGTCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: AEERKGSLGRVERAGSPTDNNGQ*VERPQG
Trigger: GCCCTGGGGACGCTCAACCAACTGGCCATTGTTATC...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp CCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCAGATAACAATGGCCAGTaGGTTGAGCGTCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: PFPCRGQERTPFARRGGSDNNGQ*VERPQG
Trigger: GCCCTGGGGACGCTCAACCAACTGGCCATTGTTATC...TGAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp GGAAGGAAGAGGGAGGGGAGAGTGGCCCACCCTGATGGCCACGGCCAAACCACAAAGTTGCTCGTCCAGTaGGAGAAACCAGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: GRKREGRVAHPDGHGQTTKLLVQ*EKPATA
Trigger: GGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACTT...TGTGGTTTGGCCGTGGCCATCAGGGTGGGCCACTCTCCCCTCCCTCTTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CAA 90 bp CGGGGTAGAGCCCCAAGCCTAGAGGCGGGAGCCTGCCGTCCTTCCATCTTGCCAAGTGAAAGTCCCAGATaGTGGGAGGAGTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: RGRAPSLEAGACRPSILPSESPR*WEESKV
Trigger: CACCTTGGACTCCTCCCACAATCTGGGACTTTCACT...TGGCAAGATGGAAGGACGGCAGGCTCCCGCCTCTAGGCTTGGGGCTCTACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS GCA 90 bp AGGCAAGGGGGTGAACCCTGGCTCGCAGAATCCACTTGCTGCCTGTaGCCCGAAAGGCCCTCCAGACCCACTCTGCCTTTTGGTAGGATT +
Preference number: 5 (lower is better)
Translates to: RQGGEPWLAESTCCL*PERPSRPTLPFGRI
Trigger: AATCCTACCAAAAGGCAGAGTGGGTCTGGAGGGCCTTTCGGGGCACAGGCAGCAAGTGGATTCTGCGAGCCAGGGTTCACCCCCTTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR CAA 90 bp CAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGACGGGGAAGTTCGGAGCCTATCTGTaGGAAGCCCGACGGCATCTC +
Preference number: 5 (lower is better)
Translates to: QTDPKTHGLWLEESLTGKFGAYL*EARRHL
Trigger: GAGATGCCGTCGGGCTTCCAACAGATAGGCTCCGAA...CTTCCCCGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571308.5
ENST00000671706.1
CDS-3UTR CAA 90 bp GTCCTTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGACAATGGCCAGTTGGTaGAGCGTCCCCAGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: VLPSCHTWAHTFLFPLALTMASW*SVPRAP
Trigger: GGGCGCCCTGGGGACGCTCAACCAACTGGCCATTGT...CAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp GCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAACAATGGCCAGTTGGTaGAGCGTCCCCAGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: APFLALILWSRWSTKLTQTMASW*SVPRAP
Trigger: GGGCGCCCTGGGGACGCTCAACCAACTGGCCATTGT...TTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp GCAGAGGAAAGGAAGGGGTCTCTGGGCCGGGTAGAGAGAGCTGGCTCTCCCACCAAGGTGAAGACTGTGTaGACCACACCAGCTCCTATG +
Preference number: 5 (lower is better)
Translates to: AEERKGSLGRVERAGSPTKVKTV*TTPAPM
Trigger: CATAGGAGCTGGTGTGGTCAACACAGTCTTCACCTT...GGTGGGAGAGCCAGCTCTCTCTACCCGGCCCAGAGACCCCTTCCTTTCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CAA 90 bp CCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTTTCGGAGCCTATCTGTaGGAAGCCCGACGGCATCTC +
Preference number: 5 (lower is better)
Translates to: PTPAWPLSRSHLALNTQVFGAYL*EARRHL
Trigger: GAGATGCCGTCGGGCTTCCAACAGATAGGCTCCGAA...AACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CAA 90 bp TTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTACAATGGCCAGTTGGTaGAGCGTCCCCAGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: LILWSRWSTKLTQRPMVCTMASW*SVPRAP
Trigger: GGGCGCCCTGGGGACGCTCAACCAACTGGCCATTGT...ACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp GGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCTATCAAGTTGCTCGTCCAGTaGGAGAAACCAGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: GILAAMSPAVSLVKSAPIKLLVQ*EKPATA
Trigger: GGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACTT...GATAGGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CAA 90 bp TCCTTCTTGGCAGCCTTGGGAAACCATCGGGGTAGAGCCCCAAGCCTAGAGGCGAGTGAAAGTCCCAGATaGTGGGAGGAGTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: SFLAALGNHRGRAPSLEASESPR*WEESKV
Trigger: CACCTTGGACTCCTCCCACAATCTGGGACTTTCACT...CGCCTCTAGGCTTGGGGCTCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp GGCTCTCCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTAGTGAAAGTCCCAGATaGTGGGAGGAGTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: GSPTPAWPLSRSHLALNTSESPR*WEESKV
Trigger: CACCTTGGACTCCTCCCACAATCTGGGACTTTCACT...AGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR CAA 90 bp GTGCTGGGTTTCACCTCCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTACCGCCAGGACATTGTaGACCAGCATGGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: VLGFTSCSKREGVRWKAATARTL*TSMALF
Trigger: GAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGGT...AGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CAA 90 bp GCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGACAATGGCCAGTTGGTaGAGCGTCCCCAGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: ASQFYQAAGILFHPEIIGTMASW*SVPRAP
Trigger: GGGCGCCCTGGGGACGCTCAACCAACTGGCCATTGT...CCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp TCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGTCCGGGATAACAATGGCCAGTaGGTTGAGCGTCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: SKREGVRWKAAEIWSNVRDNNGQ*VERPQG
Trigger: GCCCTGGGGACGCTCAACCAACTGGCCATTGTTATC...CCGGACGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR CAA 90 bp GGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCCCCTATCAGTGAAAGTCCCAGATaGTGGGAGGAGTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: GILAAMSPAVSLVKSAPISESPR*WEESKV
Trigger: CACCTTGGACTCCTCCCACAATCTGGGACTTTCACT...GATAGGGGCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CAA 90 bp CCCACCCCTGCCTGGCCCCTCAGTCGTTCTCATCTGGCCCTAAATACTCAAGTTTCCTTCTTGGCAGCCTaGGGAAACCATCGGGGTAGA +
Preference number: 5 (lower is better)
Translates to: PTPAWPLSRSHLALNTQVSFLAA*GNHRGR
Trigger: TCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA...AACTTGAGTATTTAGGGCCAGATGAGAACGACTGAGGGGCCAGGCAGGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR CAA 90 bp TTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGCAGGGCCTGGCATCCTaGCTGCCATGTCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: FHLATHGHILSCSLLPWKQGLAS*LPCLQL
Trigger: CAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCTG...CTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CAA 90 bp GTCCTTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGTTCGGAGCCTATCTGTaGGAAGCCCGACGGCATCTC +
Preference number: 5 (lower is better)
Translates to: VLPSCHTWAHTFLFPLALFGAYL*EARRHL
Trigger: GAGATGCCGTCGGGCTTCCAACAGATAGGCTCCGAA...CAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp ACCTGTCTTCCCTCCAATCCCCCTTCTCTAGCAGCGAAGAAGGTATTCTGGAGCAGCACCGCCAGGACATaGTTGACCAGCATGGCCCTT +
Preference number: 5 (lower is better)
Translates to: TCLPSNPPSLAAKKVFWSSTART*LTSMAL
Trigger: AAGGGCCATGCTGGTCAACAATGTCCTGGCGGTGCT...GCTCCAGAATACCTTCTTCGCTGCTAGAGAAGGGGGATTGGAGGGAAGACAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp GCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGCACCGCCAGGACATaGTTGACCAGCATGGCCCTT +
Preference number: 5 (lower is better)
Translates to: APFLALILWSRWSTKLTQSTART*LTSMAL
Trigger: AAGGGCCATGCTGGTCAACAATGTCCTGGCGGTGCT...TTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp GGCCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCAGCACCGCCAGGACATaGTTGACCAGCATGGCCCTT +
Preference number: 5 (lower is better)
Translates to: GPIASATYWKPMPMMKLLSTART*LTSMAL
Trigger: AAGGGCCATGCTGGTCAACAATGTCCTGGCGGTGCT...GAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CAA 90 bp GCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAGATAACAATGGCCAGTaGGTTGAGCGTCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: APFLALILWSRWSTKLTQDNNGQ*VERPQG
Trigger: GCCCTGGGGACGCTCAACCAACTGGCCATTGTTATC...TTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp ATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCGCTCGCAGAATCCACTaGCTGCCTGTGCCCCGAAAG +
Preference number: 5 (lower is better)
Translates to: IQSRSAPFLALILWSRWSARRIH*LPVPRK
Trigger: CTTTCGGGGCACAGGCAGCAAGTGGATTCTGCGAGC...GGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR CAA 90 bp CTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCTTCGGAGCCTATCTGTaGGAAGCCCGACGGCATCTC +
Preference number: 5 (lower is better)
Translates to: LPCFDSVEQVVHQTDPKTFGAYL*EARRHL
Trigger: GAGATGCCGTCGGGCTTCCAACAGATAGGCTCCGAA...GGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571308.5
ENST00000671706.1
CDS-3UTR CAA 90 bp CCCCTTTGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGACCGCCAGGACATTGTaGACCAGCATGGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: PLCPESAWQEFSESPRLWTARTL*TSMALF
Trigger: GAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGGT...CCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCAAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp GGCCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCACCGCCAGGACATTGTaGACCAGCATGGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: GPIASATYWKPMPMMKLLTARTL*TSMALF
Trigger: GAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGGT...GAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CAA 90 bp ATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCAGCACCGCCAGGACATaGTTGACCAGCATGGCCCTT +
Preference number: 5 (lower is better)
Translates to: IQSRSAPFLALILWSRWSSTART*LTSMAL
Trigger: AAGGGCCATGCTGGTCAACAATGTCCTGGCGGTGCT...GGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp TTCCATCTTGCCACACATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGAGCACCGCCAGGACATaGTTGACCAGCATGGCCCTT +
Preference number: 5 (lower is better)
Translates to: FHLATHGHILSCSLLPWKSTART*LTSMAL
Trigger: AAGGGCCATGCTGGTCAACAATGTCCTGGCGGTGCT...CTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATGTGTGGCAAGATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp TCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGAGCACCGCCAGGACATaGTTGACCAGCATGGCCCTT +
Preference number: 5 (lower is better)
Translates to: SLPCFDSVEQVVHQTDPKSTART*LTSMAL
Trigger: AAGGGCCATGCTGGTCAACAATGTCCTGGCGGTGCT...CTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGAAGTTGCTCGTCCAGTaGGAGAAACCAGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: CPESAWQEFSESPRLWEEKLLVQ*EKPATA
Trigger: GGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACTT...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp AGGGCCTGGCATCCTTGCTGCCATGTCTCCAGCTGTGTCCCTGGTGAAGAGTGCATGCCAATGATGAAGTaGCTCGTCCAGTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: RAWHPCCHVSSCVPGEECMPMMK*LVQLEK
Trigger: TTTCTCCAACTGGACGAGCAACTTCATCATTGGCAT...GCACTCTTCACCAGGGACACAGCTGGAGACATGGCAGCAAGGATGCCAGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CAA 90 bp CATGGGCACATACTTTCCTGTTCCCTCTTGCCCTGGAAGGCTGAGCCTGCAGTGGGGAAACTGGATTTCTaGTCTCCTGTCCTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: HGHILSCSLLPWKAEPAVGKLDF*SPVLLS
Trigger: AGAGAGCAGGACAGGAGACAAGAAATCCAGTTTCCC...CACTGCAGGCTCAGCCTTCCAGGGCAAGAGGGAACAGGAAAGTATGTGCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp TCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGCGCGGTGGCTCTCCACAATAGGATGCTaGTCTTCAGCAGTGACTTTA +
Preference number: 5 (lower is better)
Translates to: SFSLQGSRENSLRQARWLSTIGC*SSAVTL
Trigger: TAAAGTCACTGCTGAAGACAAGCATCCTATTGTGGA...GAGCCACCGCGCCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CAA 90 bp GTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACGCTCCCTTCCTTGCTTaGATTCTGTGGAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: VSSLPCFDSVEQVVHQTDAPFLA*ILWSRW
Trigger: CCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGC...GTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGAGCACCGCCAGGACATaGTTGACCAGCATGGCCCTT +
Preference number: 5 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGSTART*LTSMAL
Trigger: AAGGGCCATGCTGGTCAACAATGTCCTGGCGGTGCT...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CAA 90 bp CCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTGAGATCTGGTCAAACGAAGGTGAAGACTGTGTaGACCACACCAGCTCCTATG +
Preference number: 5 (lower is better)
Translates to: PALKERVSGGRQLRSGQTKVKTV*TTPAPM
Trigger: CATAGGAGCTGGTGTGGTCAACACAGTCTTCACCTT...CGTTTGACCAGATCTCAGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CAA 90 bp CCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTAAGTTGCTCGTCCAGTaGGAGAAACCAGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: PHSLRNILETHANDEVARKLLVQ*EKPATA
Trigger: GGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACTT...ACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CAA 90 bp GCTGAGATCTGGTCAAACGTCCGGCCTCGAGTTTCAGGTACTCTTAAGAAGGTGAAGTTGCTCGTCCAGTaGGAGAAACCAGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: AEIWSNVRPRVSGTLKKVKLLVQ*EKPATA
Trigger: GGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACTT...CACCTTCTTAAGAGTACCTGAAACTCGAGGCCGGACGTTTGACCAGATCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CAA 90 bp AGGGAGGTGAGTCCTTTTCCCTGCAGGGGTCAAGAGAGAACTCCCTTCGCCAGGATGCCAATGATGAAGTaGCTCGTCCAGTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: REVSPFPCRGQERTPFARMPMMK*LVQLEK
Trigger: TTTCTCCAACTGGACGAGCAACTTCATCATTGGCAT...CCTGGCGAAGGGAGTTCTCTCTTGACCCCTGCAGGGAAAAGGACTCACCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp GTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGGCTGGAGGAGTCCCTGATGCCAATGATGAAGTaGCTCGTCCAGTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: VVHQTDPKTHGLWLEESLMPMMK*LVQLEK
Trigger: TTTCTCCAACTGGACGAGCAACTTCATCATTGGCAT...CAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp TATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCGCTCGCAGAATCCACTaGCTGCCTGTGCCCCGAAAG +
Preference number: 5 (lower is better)
Translates to: YATGAFQTPQLLSNLGQLARRIH*LPVPRK
Trigger: CTTTCGGGGCACAGGCAGCAAGTGGATTCTGCGAGC...GAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS-3UTR CAA 90 bp CTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCGCTCCCTTCCTTGCTTaGATTCTGTGGAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LPCFDSVEQVVHQTDPKTAPFLA*ILWSRW
Trigger: CCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGC...GGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp TTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTGCTCCCTTCCTTGCTTaGATTCTGTGGAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LILWSRWSTKLTQRPMVCAPFLA*ILWSRW
Trigger: CCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGC...ACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp ATTCTGCAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCTTCGGAGCCTATCTGTaGGAAGCCCGACGGCATCTC +
Preference number: 5 (lower is better)
Translates to: ILQMPRAMPGTGSYNLLSFGAYL*EARRHL
Trigger: GAGATGCCGTCGGGCTTCCAACAGATAGGCTCCGAA...GCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTGCAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CAA 90 bp AGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTCCAGTTACCGCCAGGACATTGTaGACCAGCATGGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: SLRNILETHANDEVARPVTARTL*TSMALF
Trigger: GAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGGT...AACTGGACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CAA 90 bp TATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCAGCACCGCCAGGACATaGTTGACCAGCATGGCCCTT +
Preference number: 5 (lower is better)
Translates to: YATGAFQTPQLLSNLGQLSTART*LTSMAL
Trigger: AAGGGCCATGCTGGTCAACAATGTCCTGGCGGTGCT...GAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp CAGCCCATCCTCAAGTACCTCCACAATAGGATGCTTGTCTTCAGCAGTGACTTTGATAACAATGGCCAGTaGGTTGAGCGTCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: QPILKYLHNRMLVFSSDFDNNGQ*VERPQG
Trigger: GCCCTGGGGACGCTCAACCAACTGGCCATTGTTATC...AAAGTCACTGCTGAAGACAAGCATCCTATTGTGGAGGTACTTGAGGATGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CAA 90 bp TGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGATAACAATGGCCAGTaGGTTGAGCGTCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: WCVSDTSVTIQSRSAPFLDNNGQ*VERPQG
Trigger: GCCCTGGGGACGCTCAACCAACTGGCCATTGTTATC...AAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp GCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTGATAACAATGGCCAGTaGGTTGAGCGTCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: AFQTPQLLSNLGQLPSLLDNNGQ*VERPQG
Trigger: GCCCTGGGGACGCTCAACCAACTGGCCATTGTTATC...AAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp TGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGGAGGAGAAGGTGAAGACTGTGTaGACCACACCAGCTCCTATG +
Preference number: 5 (lower is better)
Translates to: CPESAWQEFSESPRLWEEKVKTV*TTPAPM
Trigger: CATAGGAGCTGGTGTGGTCAACACAGTCTTCACCTT...CTCCTCCCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp GCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGACCCATGGTCAAGGTGAAGACTGTGTaGACCACACCAGCTCCTATG +
Preference number: 5 (lower is better)
Translates to: ALILWSRWSTKLTQRPMVKVKTV*TTPAPM
Trigger: CATAGGAGCTGGTGTGGTCAACACAGTCTTCACCTT...GACCATGGGTCTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp GCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGTTGCTCGTCCAGTaGGAGAAACCAGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: ASQFYQAAGILFHPEIIGKLLVQ*EKPATA
Trigger: GGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACTT...CCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CAA 90 bp GTGCTGGGTTTCACCTCCTGCTCTAAAAGAGAGGGTGTCCGGTGGAAGGCAGCTATGCCAATGATGAAGTaGCTCGTCCAGTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: VLGFTSCSKREGVRWKAAMPMMK*LVQLEK
Trigger: TTTCTCCAACTGGACGAGCAACTTCATCATTGGCAT...AGCTGCCTTCCACCGGACACCCTCTCTTTTAGAGCAGGAGGTGAAACCCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673275.1
CDS-3UTR CAA 90 bp AGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTCCAGTTTCCTTCTTGGCAGCCTaGGGAAACCATCGGGGTAGA +
Preference number: 5 (lower is better)
Translates to: SLRNILETHANDEVARPVSFLAA*GNHRGR
Trigger: TCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA...AACTGGACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR CAA 90 bp GCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGGCTAGTAACTCACTGTaGAAGGTGGGGAGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: ASQFYQAAGILFHPEIIGASNSL*KVGRRG
Trigger: TCCCCTCCTCCCCACCTTCAACAGTGAGTTACTAGC...CCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CAA 90 bp AGCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGACCGCCAGGACATTGTaGACCAGCATGGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: SFPILPGCRDSFPPGNNRTARTL*TSMALF
Trigger: GAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGGT...CCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS-3UTR CAA 90 bp TGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTACCGCCAGGACATTGTaGACCAGCATGGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: WCVSDTSVTIQSRSAPFLTARTL*TSMALF
Trigger: GAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGGT...AAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp ATCCAATCTAGGTCAGCTCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCAAGGTGAAGACTGTGTaGACCACACCAGCTCCTATG +
Preference number: 5 (lower is better)
Translates to: IQSRSAPFLALILWSRWSKVKTV*TTPAPM
Trigger: CATAGGAGCTGGTGTGGTCAACACAGTCTTCACCTT...GGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGCTGACCTAGATTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp TCCCTTCCTTGCTTTGATTCTGTGGAGCAGGTGGTCCACCAAACTGACCCAAAGAAGGTGAAGACTGTGTaGACCACACCAGCTCCTATG +
Preference number: 5 (lower is better)
Translates to: SLPCFDSVEQVVHQTDPKKVKTV*TTPAPM
Trigger: CATAGGAGCTGGTGTGGTCAACACAGTCTTCACCTT...CTTTGGGTCAGTTTGGTGGACCACCTGCTCCACAGAATCAAAGCAAGGAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp GCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTAAGTTGCTCGTCCAGTaGGAGAAACCAGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: AFQTPQLLSNLGQLPSLLKLLVQ*EKPATA
Trigger: GGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACTT...AAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp TGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTAAGTTGCTCGTCCAGTaGGAGAAACCAGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: CVSDTSVTIQSRSAPFLAKLLVQ*EKPATA
Trigger: GGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACTT...AGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp CTCCACCAACAACACCGAGACCAAGGTGAAGACTGTGTTGACCACACCAGCTCCATGCCAATGATGAAGTaGCTCGTCCAGTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: LHQQHRDQGEDCVDHTSSMPMMK*LVQLEK
Trigger: TTTCTCCAACTGGACGAGCAACTTCATCATTGGCAT...GGAGCTGGTGTGGTCAACACAGTCTTCACCTTGGTCTCGGTGTTGTTGGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570783.5
ENST00000673275.1
CDS-3UTR CAA 90 bp CCCCATAGCCTCCGCAACATACTGGAAACCCATGCCAATGATGAAGTTGCTCGTGGGAAACTGGATTTCTaGTCTCCTGTCCTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: PHSLRNILETHANDEVARGKLDF*SPVLLS
Trigger: AGAGAGCAGGACAGGAGACAAGAAATCCAGTTTCCC...ACGAGCAACTTCATCATTGGCATGGGTTTCCAGTATGTTGCGGAGGCTATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572485.5
ENST00000672821.1
CDS-3UTR CAA 90 bp TTTCCAGGCAGCCTTTCAAATCCCCTCTTTGCCTTAGTTGGTCAAAAGCCTGTGTCCTTCTTGGCAGCCTaGGGAAACCATCGGGGTAGA +
Preference number: 5 (lower is better)
Translates to: FPGSLSNPLFALVGQKPVSFLAA*GNHRGR
Trigger: TCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA...CACAGGCTTTTGACCAACTAAGGCAAAGAGGGGATTTGAAAGGCTGCCTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp AGCTTCCCAATTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGTCCTTCTTGGCAGCCTaGGGAAACCATCGGGGTAGA +
Preference number: 5 (lower is better)
Translates to: SFPILPGCRDSFPPGNNRSFLAA*GNHRGR
Trigger: TCTACCCCGATGGTTTCCCAAGGCTGCCAAGAAGGA...CCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAATTGGGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp GGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGAAGTTGCTCGTCCAGTaGGAGAAACCAGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: GKLCHWCVSDTSVTIQSRKLLVQ*EKPATA
Trigger: GGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACTT...CCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp CCCCTTTGCCCAGAGTCTGCGTGGCAAGAATTCAGTGAAAGTCCCAGATTGTGGATGCCAATGATGAAGTaGCTCGTCCAGTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: PLCPESAWQEFSESPRLWMPMMK*LVQLEK
Trigger: TTTCTCCAACTGGACGAGCAACTTCATCATTGGCAT...CCACAATCTGGGACTTTCACTGAATTCTTGCCACGCAGACTCTGGGCAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp TTCTACCAGGCTGCAGGGATTCTTTTCCACCCGGAAATAATAGGGAAGAGAGGGGGGAAACTGGATTTCTaGTCTCCTGTCCTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: FYQAAGILFHPEIIGKRGGKLDF*SPVLLS
Trigger: AGAGAGCAGGACAGGAGACAAGAAATCCAGTTTCCC...CCCTCTCTTCCCTATTATTTCCGGGTGGAAAAGAATCCCTGCAGCCTGGTAGAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp CAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCATTTACGCTAGTAACTCACTGTaGAAGGTGGGGAGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: QMPRAMPGTGSYNLLSIYASNSL*KVGRRG
Trigger: TCCCCTCCTCCCCACCTTCAACAGTGAGTTACTAGC...GTAAATGCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CAA 90 bp GGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGGCTCCCTTCCTTGCTTaGATTCTGTGGAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GKLCHWCVSDTSVTIQSRAPFLA*ILWSRW
Trigger: CCACCTGCTCCACAGAATCAAAGCAAGGAAGGGAGC...CCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp TTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGGATAACAATGGCCAGTaGGTTGAGCGTCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: FYSWSKVSYATGAFQTPQDNNGQ*VERPQG
Trigger: GCCCTGGGGACGCTCAACCAACTGGCCATTGTTATC...CTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp GCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCCTTGCTTAAGGTGAAGACTGTGTaGACCACACCAGCTCCTATG +
Preference number: 5 (lower is better)
Translates to: AFQTPQLLSNLGQLPSLLKVKTV*TTPAPM
Trigger: CATAGGAGCTGGTGTGGTCAACACAGTCTTCACCTT...AAGCAAGGAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp ATTCTGCAAATGCCAAGAGCAATGCCCGGCACTGGCAGCTACAATTTATTGAGCAAGGTGAAGACTGTGTaGACCACACCAGCTCCTATG +
Preference number: 5 (lower is better)
Translates to: ILQMPRAMPGTGSYNLLSKVKTV*TTPAPM
Trigger: CATAGGAGCTGGTGTGGTCAACACAGTCTTCACCTT...GCTCAATAAATTGTAGCTGCCAGTGCCGGGCATTGCTCTTGGCATTTGCAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS-3UTR CAA 90 bp AAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAAAGTTGCTCGTCCAGTaGGAGAAACCAGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: KLCHWCVSDTSVTIQSRSKLLVQ*EKPATA
Trigger: GGCTGTGGCTGGTTTCTCCAACTGGACGAGCAACTT...TGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp TTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGACCGCCAGGACATTGTaGACCAGCATGGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: FYSWSKVSYATGAFQTPQTARTL*TSMALF
Trigger: GAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGGT...CTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp CACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGTCAGCTCCCTTCATGCCAATGATGAAGTaGCTCGTCCAGTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: HWCVSDTSVTIQSRSAPFMPMMK*LVQLEK
Trigger: TTTCTCCAACTGGACGAGCAACTTCATCATTGGCAT...GAAGGGAGCTGACCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp GTATCATTTTATTCTTGGAGTAAGGTAAGTTATGCCACTGGTGCGTTTCAGACAACCGCCAGGACATTGTaGACCAGCATGGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: VSFYSWSKVSYATGAFQTTARTL*TSMALF
Trigger: GAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGGT...TGTCTGAAACGCACCAGTGGCATAACTTACCTTACTCCAAGAATAAAATGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp GGTAAGTTATGCCACTGGTGCGTTTCAGACACCTCAGTTACTATCCAATCTAGGATGCCAATGATGAAGTaGCTCGTCCAGTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: GKLCHWCVSDTSVTIQSRMPMMK*LVQLEK
Trigger: TTTCTCCAACTGGACGAGCAACTTCATCATTGGCAT...CCTAGATTGGATAGTAACTGAGGTGTCTGAAACGCACCAGTGGCATAACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS-3UTR CAA 90 bp AGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAAACGTATATAAAACCGCCAGGACATTGTaGACCAGCATGGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: STTDLWFLLSIPFSNVYKTARTL*TSMALF
Trigger: GAAAAGGGCCATGCTGGTCAACAATGTCCTGGCGGT...TTTATATACGTTTGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp AGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAAACGTATATAAAGGGAAACTGGATTTCTaGTCTCCTGTCCTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: STTDLWFLLSIPFSNVYKGKLDF*SPVLLS
Trigger: AGAGAGCAGGACAGGAGACAAGAAATCCAGTTTCCC...TTTATATACGTTTGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp ATATATACATTTAGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCAAAGGTGAAGACTGTGTaGACCACACCAGCTCCTATG +
Preference number: 5 (lower is better)
Translates to: IYTFSTTDLWFLLSIPFSKVKTV*TTPAPM
Trigger: CATAGGAGCTGGTGTGGTCAACACAGTCTTCACCTT...TGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACTAAATGTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317370.13
ENST00000572485.5
ENST00000672821.1
ENST00000673224.1
CDS-3UTR CAA 90 bp ATATATACATTTAGTACAACCGACCTTTGGTTTCTTCTCTCAATCCCCTTTTCATCCACAATAGGATGCTaGTCTTCAGCAGTGACTTTA +
Preference number: 5 (lower is better)
Translates to: IYTFSTTDLWFLLSIPFSSTIGC*SSAVTL
Trigger: TAAAGTCACTGCTGAAGACAAGCATCCTATTGTGGA...TGAAAAGGGGATTGAGAGAAGAAACCAAAGGTCGGTTGTACTAAATGTATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS CCA 72 bp CGGGGGTCCCGGAGTGACGTGCGAGGGCGGGCCCGATaGGACCCACAGCCACAAGCCAAGGACCCGGAGAGC +
Preference number: 6 (lower is better)
Translates to: RGSRSDVRGRAR*DPQPQAKDPES
Trigger: GCTCTCCGGGTCCTTGGCTTGTGGCTGTGGGTCCCATCGGGCCCGCCCTCGCACGTCACTCCGGGACCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317370.13
ENST00000571308.5
ENST00000572485.5
ENST00000671706.1
ENST00000672821.1
ENST00000673224.1
CDS GCA 72 bp CCTGGAGTCTCTGACTCCGGCCTGGAGCGCAGAACCTaGGGAGGCCGCGGGGGTCCCGGAGTGACGTGCGAG +
Preference number: 6 (lower is better)
Translates to: PGVSDSGLERRT*GGRGGPGVTCE
Trigger: CTCGCACGTCACTCCGGGACCCCCGCGGCCTCCGCAGGTTCTGCGCTCCAGGCCGGAGTCAGAGACTCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000571308.5
ENST00000572485.5
ENST00000671706.1
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1
CDS CCA 72 bp GGACCCACAGCCACAAGCCAAGGACCCGGAGAGCAGTaGGGCTCCCGCGGATCTGGTGGAGCGGGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: GPTATSQGPGEQ*GSRGSGGAGLG
Trigger: CCCCAGCCCCGCTCCACCAGATCCGCGGGAGCCCCACTGCTCTCCGGGTCCTTGGCTTGTGGCTGTGGGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317370.13
ENST00000673224.1
CDS TCA 72 bp CCCACGGAGAGCCTCCGGTCCTCGAAACACTGCCCGTaGGCGAAGACGGACGGACAGCTCCCGGAGGGCAAG +
Preference number: 6 (lower is better)
Translates to: PTESLRSSKHCP*AKTDGQLPEGK
Trigger: CTTGCCCTCCGGGAGCTGTCCGTCCGTCTTCGCTCACGGGCAGTGTTTCGAGGACCGGAGGCTCTCCGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS GCA 72 bp ACGGACAGCTCCCGGAGGGCAAGACCCGCCTGGATCTaGTTTCCCGAGTCGGATCGAGGGCAGGGTGTCCCC +
Preference number: 6 (lower is better)
Translates to: TDSSRRARPAWI*FPESDRGQGVP
Trigger: GGGGACACCCTGCCCTCGATCCGACTCGGGAAAGCAGATCCAGGCGGGTCTTGCCCTCCGGGAGCTGTCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS TCA 72 bp GGAGTCCCTGACGGGGAAGCAGGTGGGCTAGCTGTGTaGTGCCCACCTCTGGCCTACGGTGTGGGAGGCTGG +
Preference number: 6 (lower is better)
Translates to: GVPDGEAGGLAV*CPPLAYGVGGW
Trigger: CCAGCCTCCCACACCGTAGGCCAGAGGTGGGCATCACACAGCTAGCCCACCTGCTTCCCCGTCAGGGACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS CCA 72 bp AGCGCCGCGCCGCCTACTAGGCAAGGGGGTGAACCCTaGCTCGCAGAATCCACTTGCTGCCTGTGCCCCGAA +
Preference number: 6 (lower is better)
Translates to: SAAPPTRQGGEP*LAESTCCLCPE
Trigger: TTCGGGGCACAGGCAGCAAGTGGATTCTGCGAGCCAGGGTTCACCCCCTTGCCTAGTAGGCGGCGCGGCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS CCA 72 bp AGACGGACGGACAGCTCCCGGAGGGCAAGACCCGCCTaGATCTGCTTTCCCGAGTCGGATCGAGGGCAGGGT +
Preference number: 6 (lower is better)
Translates to: RRTDSSRRARPA*ICFPESDRGQG
Trigger: ACCCTGCCCTCGATCCGACTCGGGAAAGCAGATCCAGGCGGGTCTTGCCCTCCGGGAGCTGTCCGTCCGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS CCA 72 bp CCCGCAGGTGAGTGGGAGCAATCTCCCCCACGTACATaGGCACCAGCCCTGATGTCAGCCCTGAGTAGGCGC +
Preference number: 6 (lower is better)
Translates to: PAGEWEQSPPRT*APALMSALSRR
Trigger: GCGCCTACTCAGGGCTGACATCAGGGCTGGTGCCCATGTACGTGGGGGAGATTGCTCCCACTCACCTGCGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317370.13
ENST00000424875.2
ENST00000571308.5
ENST00000572485.5
ENST00000671706.1
ENST00000672821.1
ENST00000672921.1
ENST00000673224.1
CDS CCA 72 bp GTGGTCCACCAAACTGACCCAAAGACCCATGGTCTGTaGCTGGAGGAGTCCCTGACGGGGAAGCAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: VVHQTDPKTHGL*LEESLTGKQVG
Trigger: GCCCACCTGCTTCCCCGTCAGGGACTCCTCCAGCCACAGACCATGGGTCTTTGGGTCAGTTTGGTGGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424875.2
ENST00000571308.5
ENST00000671706.1
ENST00000672921.1
CDS GCA 72 bp GGTGAACCCTGGCTCGCAGAATCCACTTGCTGCCTGTaGCCCGAAAGGCCCTCCAGACCCACTCTGCCTTTT +
Preference number: 6 (lower is better)
Translates to: GEPWLAESTCCL*PERPSRPTLPF
Trigger: AAAAGGCAGAGTGGGTCTGGAGGGCCTTTCGGGGCACAGGCAGCAAGTGGATTCTGCGAGCCAGGGTTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424875.2
ENST00000672921.1
CDS CAA 72 bp CTGCTGAGGGGGTTCCCCATCTTCGGAGCCTATCTGTaGGAAGCCCGACGGCATCTCGTCTTAGAAGAGCTG +
Preference number: 6 (lower is better)
Translates to: LLRGFPIFGAYL*EARRHLVLEEL
Trigger: CAGCTCTTCTAAGACGAGATGCCGTCGGGCTTCCAACAGATAGGCTCCGAAGATGGGGAACCCCCTCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000317370.13
ENST00000570783.5
ENST00000571308.5
ENST00000572485.5
ENST00000671706.1
ENST00000672821.1
ENST00000673224.1
ENST00000673275.1