RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC2A11 (Homo sapiens)

Ensembl gene IDs: ENSG00000133460

Ensembl transcript IDs: ENST00000255830.7, ENST00000316185.8, ENST00000345044.10, ENST00000398356.6, ENST00000403208.7, ENST00000405286.6, ENST00000405340.6, ENST00000405847.5, ENST00000418102.5, ENST00000423972.5, ENST00000436643.5, ENST00000440493.5, ENST00000461809.5, ENST00000467660.5, ENST00000473357.1, ENST00000473740.5, ENST00000486907.1, ENST00000489322.5, ENST00000491948.5, ENST00000492516.1, ENST00000611880.4, ENST00000618114.2, ENST00000618502.4, ENST00000619254.4, ENST00000619667.3, ENST00000620942.4, ENST00000625546.2, ENST00000625663.2, ENST00000627257.2, ENST00000627998.2, ENST00000628101.1, ENST00000628119.2, ENST00000628520.2, ENST00000629072.2, ENST00000629525.1, ENST00000630108.2, ENST00000630215.2, ENST00000630489.2, ENST00000630945.2, ENST00000631313.2, ENST00000631328.1

Found 1140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAACAGCTCCCATaGGCGCCGGGCACGGCAGCCCTGGCAGGCAGCGCGCTCCTCCTC +
Preference number: 1 (lower is better)
Translates to: ACHLSPQGPMLEQLP*APGTAALAGSALLL
Trigger: GAGGAGGAGCGCGCTGCCTGCCAGGGCTGCCGTGCCCGGCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR CCA 90 bp CACATGAGCGCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTaGTCAAACAGCTCTGTGGCCAGGATCCCCGTCACTCCGGCAGGG +
Preference number: 1 (lower is better)
Translates to: HMSAPQTMQAAGLAI*SNSSVARIPVTPAG
Trigger: CCCTGCCGGAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGCTCATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR CCA 90 bp ACCGCCGTGAGCAGCTCGCAGCTCCCAGTCCCGATGATCGCGTACTaGATCTTCGCTTCCGGCACTCCTGCCTTCCGGAACACGGAGGAG +
Preference number: 1 (lower is better)
Translates to: TAVSSSQLPVPMIAY*IFASGTPAFRNTEE
Trigger: CTCCTCCGTGTTCCGGAAGGCAGGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGGGACTGGGAGCTGCGAGCTGCTCACGGCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR TCA 90 bp TCCGACCACCTGTCCCATCACGATCCCCAGAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTC +
Preference number: 1 (lower is better)
Translates to: SDHLSHHDPQSRKDG*AHGHSSSELLRGAL
Trigger: GAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGATGGGACAGGTGGTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR GCA 90 bp CCAGGCCAGATGCCTCTTTGCCAGAGTCCTACCACCCTGCTCTCCTaGCCACCTACACACCTCCCTGCAGGGAGTCTGCAATTGCCCCGT +
Preference number: 1 (lower is better)
Translates to: PGQMPLCQSPTTLLS*PPTHLPAGSLQLPR
Trigger: ACGGGGCAATTGCAGACTCCCTGCAGGGAGGTGTGTAGGTGGGCAGGAGAGCAGGGTGGTAGGACTCTGGCAAAGAGGCATCTGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR GCA 90 bp CCCAGTCCCGATGATCGCGTACTGGATCTTCGCTTCCGGCACTCCTaGCTTCCGGAACACGGAGGAGGCGTAGGCGTACACCGAGTCATT +
Preference number: 1 (lower is better)
Translates to: PSPDDRVLDLRFRHS*LPEHGGGVGVHRVI
Trigger: AATGACTCGGTGTACGCCTACGCCTCCTCCGTGTTCCGGAAGGCAGGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGGGACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR GCA 90 bp CACCAGGAGGGACTTCTTCCTTCCCAGCGTGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAGGCCTCCCAGGGGATACAGAGACAC +
Preference number: 1 (lower is better)
Translates to: HQEGLLPSQRDGQGT*KQCSKEASQGIQRH
Trigger: GTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAAGAAGTCCCTCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR GCA 90 bp GGACTTCTTCCTTCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGGGA +
Preference number: 1 (lower is better)
Translates to: GLLPSQRDGQGTCKQ*SKEASQGIQRHDEG
Trigger: TCCCTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAAGAAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR GCA 90 bp CTGCCCACCTACACACCTCCCTGCAGGGAGTCTGCAATTGCCCCGTaGCTCTTCCTATCCAAGTCTGGGTCTGAACATCAAGATCCCTCC +
Preference number: 1 (lower is better)
Translates to: LPTYTPPCRESAIAP*LFLSKSGSEHQDPS
Trigger: GGAGGGATCTTGATGTTCAGACCCAGACTTGGATAGGAAGAGGCACGGGGCAATTGCAGACTCCCTGCAGGGAGGTGTGTAGGTGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR TCA 90 bp AGGGGATACAGAGACACGATGAGGGACCACATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCAGTACGCGCCTGCCATGTCTCATTG +
Preference number: 1 (lower is better)
Translates to: RGYRDTMRDHISRTR*SGSGSPVRACHVSL
Trigger: CAATGAGACATGGCAGGCGCGTACTGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTATGTGGTCCCTCATCGTGTCTCTGTATCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR CCA 90 bp GGAAGGTCTTGCCTTTGGTCTCAGGAAGGAACAGGCCAGTGTAGATaGCCCCACAGACACAGACACCAAGGAAAGGGACATAGAGGAAGT +
Preference number: 1 (lower is better)
Translates to: GRSCLWSQEGTGQCR*PHRHRHQGKGHRGS
Trigger: ACTTCCTCTATGTCCCTTTCCTTGGTGTCTGTGTCTGTGGGGCCATCTACACTGGCCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR TCA 90 bp ATTCCTGAATGTGATTTACTGGTTTGTTATGAAGGATACAACTCATaGATAGCCAGATGGGAAAGATGCACTGGGCCTGATCCTGGGAGA +
Preference number: 1 (lower is better)
Translates to: IPECDLLVCYEGYNS*IARWERCTGPDPGR
Trigger: TCTCCCAGGATCAGGCCCAGTGCATCTTTCCCATCTGGCTATTCATGAGTTGTATCCTTCATAACAAACCAGTAAATCACATTCAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR CCA 90 bp CTCCTAATACGTGCAACAACATTCATGAATCCCAAAAACTTTATCTaGAGCCAAGCCAGACACAAATGTGTACATACAGTACGGAATGAC +
Preference number: 1 (lower is better)
Translates to: LLIRATTFMNPKNFI*SQARHKCVHTVRND
Trigger: GTCATTCCGTACTGTATGTACACATTTGTGTCTGGCTTGGCTCCAGATAAAGTTTTTGGGATTCATGAATGTTGTTGCACGTATTAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
3UTR-3UTR GCA 90 bp CACATGAGCGCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTGGTCAAACGCGCCCCGCAGACCATaGAGGCAGCAGGCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: HMSAPQTMQAAGLAIWSNAPRRP*RQQAWP
Trigger: TGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGC...GTTTGACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGCTCATGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR TCA 90 bp CCCCGGAGCCGCCGTAGTGCTGAGTCCGACCACCTGTCCCATCACGATCCCCAGAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCC +
Preference number: 2 (lower is better)
Translates to: PRSRRSAESDHLSHHDPQSRKDG*AHGHSS
Trigger: GGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCT...CTGGGGATCGTGATGGGACAGGTGGTCGGACTCAGCACTACGGCGGCTCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
3UTR-3UTR TCA 90 bp GCCACAGTGAAGATGCTCCCCCAGCAGGTCATCAGGCTGTACCCACCGATGAGCGGCTGTACCCACCGATaGGCAGCACGCGCCGACCCA +
Preference number: 2 (lower is better)
Translates to: ATVKMLPQQVIRLYPPMSGCTHR*AARADP
Trigger: TGGGTCGGCGCGTGCTGCTCATCGGTGGGTACAGCC...GCTCATCGGTGGGTACAGCCTGATGACCTGCTGGGGGAGCATCTTCACTGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR CCA 90 bp GGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAACCACGAGCTCAGGGCCCGATGCTaGAACAGCTCCCATGGGCGC +
Preference number: 2 (lower is better)
Translates to: GVHRVIPAELHGTAQNHELRARC*NSSHGR
Trigger: GCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAG...CTCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR CCA 90 bp GATCCACATGAGCGCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTGGTCTCCCGCAGAGCTCCATaGCACTGCCCAGAACCACGA +
Preference number: 2 (lower is better)
Translates to: DPHERPADHAGSRPGHLVSRRAP*HCPEPR
Trigger: TCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGA...GACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGCTCATGTGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR GCA 90 bp GGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGACCCGCTTCCGGCACTCCTaGCTTCCGGAACACGGAGGA +
Preference number: 2 (lower is better)
Translates to: GNPRPTRMSMIHMSAPQTRFRHS*LPEHGG
Trigger: TCCTCCGTGTTCCGGAAGGCAGGAGTGCCGGAAGCG...GGTCTGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR CCA 90 bp GCCACAGTGAAGATGCTCCCCCAGCAGGTCATCAGGCTGTACCCACCGATGAGCCTCAGGGCCCGATGCTaGAACAGCTCCCATGGGCGC +
Preference number: 2 (lower is better)
Translates to: ATVKMLPQQVIRLYPPMSLRARC*NSSHGR
Trigger: GCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAG...GCTCATCGGTGGGTACAGCCTGATGACCTGCTGGGGGAGCATCTTCACTGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR CCA 90 bp CTGGTCAAACAGCTCTGTGGCCAGGATCCCCGTCACTCCGGCAGGGCCAATGCCTCCCGCAGAGCTCCATaGCACTGCCCAGAACCACGA +
Preference number: 2 (lower is better)
Translates to: LVKQLCGQDPRHSGRANASRRAP*HCPEPR
Trigger: TCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGA...GGCATTGGCCCTGCCGGAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR TCA 90 bp GCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 2 (lower is better)
Translates to: ATAPRSSLGALSPRYMGWSLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...CCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR-3UTR TCA 90 bp CACATGAGCGCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTGGTCAAACAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCC +
Preference number: 2 (lower is better)
Translates to: HMSAPQTMQAAGLAIWSNSRKDG*AHGHSS
Trigger: GGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCT...GTTTGACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGCTCATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
3UTR-3UTR TCA 90 bp CTGGTCAAACAGCTCTGTGGCCAGGATCCCCGTCACTCCGGCAGGGCCAATGCCAGCTCCCAGTCCCGATaGTCGCGTACTGGATCTTCG +
Preference number: 2 (lower is better)
Translates to: LVKQLCGQDPRHSGRANASSQSR*SRTGSS
Trigger: CGAAGATCCAGTACGCGATCATCGGGACTGGGAGCT...GGCATTGGCCCTGCCGGAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR CCA 90 bp CAGCTCCCAGTCCCGATGATCGCGTACTGGATCTTCGCTTCCGGCACTCCTGCCTCCCGCAGAGCTCCATaGCACTGCCCAGAACCACGA +
Preference number: 2 (lower is better)
Translates to: QLPVPMIAYWIFASGTPASRRAP*HCPEPR
Trigger: TCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGA...GGCAGGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGGGACTGGGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR CCA 90 bp GATCCACATGAGCGCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTGGTCCAAAGATGCAGGCCATaGCCAGGTAGAGTGTCCAGG +
Preference number: 2 (lower is better)
Translates to: DPHERPADHAGSRPGHLVQRCRP*PGRVSR
Trigger: CCTGGACACTCTACCTGGCCATGGCCTGCATCTTTG...GACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGCTCATGTGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR CCA 90 bp CTGCAGGCACAGGGCCACAGTGAAGATGCTCCCCCAGCAGGTCATCAGGCTGTACCCTCCCACCCAGGTTaGGACCAAGAGAGGACAGGG +
Preference number: 2 (lower is better)
Translates to: LQAQGHSEDAPPAGHQAVPSHPG*DQERTG
Trigger: CCCTGTCCTCTCTTGGTCCCAACCTGGGTGGGAGGG...TACAGCCTGATGACCTGCTGGGGGAGCATCTTCACTGTGGCCCTGTGCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR CAA 90 bp AGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAACCACGAGGCTaGTCACCTGTCTCCTCAGGGCCCGATGCTGGAACAGCTCCCATG +
Preference number: 2 (lower is better)
Translates to: SHSRRAPWHCPEPRG*SPVSSGPDAGTAPM
Trigger: CATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR TCA 90 bp GAGCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 2 (lower is better)
Translates to: ELMATAPRSSLGALSPRYSLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...GTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR-3UTR TCA 90 bp TCTCAGGAAGGAACAGGCCAGTGTAGATGGCCCCACAGACACAGACACCAAGGAGGCTGTACCCACCGATaGGCAGCACGCGCCGACCCA +
Preference number: 2 (lower is better)
Translates to: SQEGTGQCRWPHRHRHQGGCTHR*AARADP
Trigger: TGGGTCGGCGCGTGCTGCTCATCGGTGGGTACAGCC...TCCTTGGTGTCTGTGTCTGTGGGGCCATCTACACTGGCCTGTTCCTTCCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR TCA 90 bp CCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTGCTCCAAAGAGGCCTCCCAGGATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 2 (lower is better)
Translates to: PSVMAKGPASSAPKRPPRISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...CCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR-3UTR GCA 90 bp AACCGCCGTGAGCAGCTCGCAGCTCCCAGTCCCGATGATCGCGTACTGGATCTTACCACCCTGCTCTCCTaGCCACCTACACACCTCCCT +
Preference number: 2 (lower is better)
Translates to: NRREQLAAPSPDDRVLDLTTLLS*PPTHLP
Trigger: AGGGAGGTGTGTAGGTGGGCAGGAGAGCAGGGTGGT...AAGATCCAGTACGCGATCATCGGGACTGGGAGCTGCGAGCTGCTCACGGCGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR GCA 90 bp CACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAACAGCTCCCATGGAGAGTCCTACCACCCTaGTCTCCTGCCCACCTACAC +
Preference number: 2 (lower is better)
Translates to: HEACHLSPQGPMLEQLPWRVLPP*SPAHLH
Trigger: GTGTAGGTGGGCAGGAGAGCAGGGTGGTAGGACTCT...CCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR TCA 90 bp GAAGTGGGACAAGGCCTCCATGATAAAGGGAAATCCCAGGCCGACCAGGATGAGGGCACAGGGCCACAGTaGAGATGCTCCCCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: EVGQGLHDKGKSQADQDEGTGPQ*RCSPSR
Trigger: CCTGCTGGGGGAGCATCTTCACTGTGGCCCTGTGCC...CTCATCCTGGTCGGCCTGGGATTTCCCTTTATCATGGAGGCCTTGTCCCACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR TCA 90 bp CCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTGCTGCCTCAGCCTCCTaGGTAGCTAGAGCTGTTAGC +
Preference number: 2 (lower is better)
Translates to: PLPSQTRSGLLVCIPIPTAASAS*VARAVS
Trigger: GCTAACAGCTCTAGCTACTCAGGAGGCTGAGGCAGC...AGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR TCA 90 bp GGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGACCACTCTTGGACTCAAGTaGTCCTGCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: GNPRPTRMSMIHMSAPQTTLGLK*SCCLSL
Trigger: GAGGCTGAGGCAGCAGGATCACTTGAGTCCAAGAGT...GGTCTGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR TCA 90 bp GGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGACCTGTCTCCACAGTCAATaGGGAGGTAGCGCGGGCTTT +
Preference number: 2 (lower is better)
Translates to: GNPRPTRMSMIHMSAPQTCLHSQ*GGSAGF
Trigger: AAAGCCCGCGCTACCTCCTCATTGACTGTGGAGACA...GGTCTGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR GCA 90 bp CACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAACCTACACACCTCCCTaGAGGGAGTCTGCAATTGCC +
Preference number: 2 (lower is better)
Translates to: HCPEPRGLSPVSSGPDAGTYTPP*RESAIA
Trigger: GGCAATTGCAGACTCCCTGCAGGGAGGTGTGTAGGT...TCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR GCA 90 bp CTCGCAGCTCCCAGTCCCGATGATCGCGTACTGGATCTTCGCTTCCGGCACTCCAGAGGCCAGGCCAGATaGCTCTTTGCCAGAGTCCTA +
Preference number: 2 (lower is better)
Translates to: LAAPSPDDRVLDLRFRHSRGQAR*LFARVL
Trigger: TAGGACTCTGGCAAAGAGGCATCTGGCCTGGCCTCT...GGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGGGACTGGGAGCTGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR CCA 90 bp AGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAACCACGAAGATGGCTGAGCTCATaGCCACAGCTCCTCGGAGCT +
Preference number: 2 (lower is better)
Translates to: RRTPSHSRRAPWHCPEPRRWLSS*PQLLGA
Trigger: AGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCT...TCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
3UTR-3UTR CCA 90 bp GAAGTGGGACAAGGCCTCCATGATAAAGGGAAATCCCAGGCCGACCAGGATGAGCTCAGGGCCCGATGCTaGAACAGCTCCCATGGGCGC +
Preference number: 2 (lower is better)
Translates to: EVGQGLHDKGKSQADQDELRARC*NSSHGR
Trigger: GCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAG...CTCATCCTGGTCGGCCTGGGATTTCCCTTTATCATGGAGGCCTTGTCCCACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR TCA 90 bp AGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 2 (lower is better)
Translates to: SSSELLRGALPQVHGLDVSLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...AACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR-3UTR TCA 90 bp GCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 2 (lower is better)
Translates to: AVKMAELMATAPRSSLGAAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...CGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR-3UTR TCA 90 bp ACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGAGCTGCTCACACCTGCATTaGCTCCCACGAGCAGTCTTC +
Preference number: 2 (lower is better)
Translates to: TIPRAVKMAELMATAPRSCSHLH*LPRAVF
Trigger: GAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCA...GCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR-3UTR TCA 90 bp AGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAATGCTCACACCTGCATTaGCTCCCACGAGCAGTCTTC +
Preference number: 2 (lower is better)
Translates to: RRRRTPSHSRRAPWHCPECSHLH*LPRAVF
Trigger: GAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCA...TTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
3UTR-3UTR TCA 90 bp GGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAACCACGAGTACCACGCTCACCATTaGTTGCTAAGCACCTGGAGC +
Preference number: 2 (lower is better)
Translates to: GVHRVIPAELHGTAQNHEYHAHH*LLSTWS
Trigger: GCTCCAGGTGCTTAGCAATCAATGGTGAGCGTGGTA...CTCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR TCA 90 bp ACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAACTGGGATTACAGTCATaGGCTGCCACAACCAGCCTG +
Preference number: 2 (lower is better)
Translates to: TAQNHEACHLSPQGPMLELGLQS*AATTSL
Trigger: CAGGCTGGTTGTGGCAGCTCATGACTGTAATCCCAG...TTCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR TCA 90 bp CCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACGCTGCCTCAGCCTCCTaGGTAGCTAGAGCTGTTAGC +
Preference number: 2 (lower is better)
Translates to: PLSDEVGPPGMHTHTHYNAASAS*VARAVS
Trigger: GCTAACAGCTCTAGCTACTCAGGAGGCTGAGGCAGC...GTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR TCA 90 bp CAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTGCTGCCTCAGCCTCCTaGGTAGCTAGAGCTGTTAGC +
Preference number: 2 (lower is better)
Translates to: QLRQKAGQWFPRSGTGVGAASAS*VARAVS
Trigger: GCTAACAGCTCTAGCTACTCAGGAGGCTGAGGCAGC...ACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR TCA 90 bp GGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGGCTGCCTCAGCCTCCTaGGTAGCTAGAGCTGTTAGC +
Preference number: 2 (lower is better)
Translates to: GSPGLGLGWVTDSKWACGAASAS*VARAVS
Trigger: GCTAACAGCTCTAGCTACTCAGGAGGCTGAGGCAGC...CCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR TCA 90 bp GCCACAGTGAAGATGCTCCCCCAGCAGGTCATCAGGCTGTACCCACCGATGAGCACTCTTGGACTCAAGTaGTCCTGCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: ATVKMLPQQVIRLYPPMSTLGLK*SCCLSL
Trigger: GAGGCTGAGGCAGCAGGATCACTTGAGTCCAAGAGT...GCTCATCGGTGGGTACAGCCTGATGACCTGCTGGGGGAGCATCTTCACTGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR GCA 90 bp CTGCCTTCCGGAACACGGAGGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGTTCATGCTCACACCTaGATTGACTCCCACGAGCAG +
Preference number: 2 (lower is better)
Translates to: LPSGTRRRRRRTPSHSRRVHAHT*IDSHEQ
Trigger: CTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAAC...TCTGCGGGAATGACTCGGTGTACGCCTACGCCTCCTCCGTGTTCCGGAAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
3UTR-3UTR GCA 90 bp GTAGCTGGCTTTGGCTCTGGCCACCCCTTTGGGACTAGAGTTCTGTTGACTGGACTCCTCAGGGCCCGATaGTGGAACAGCTCCCATGGG +
Preference number: 2 (lower is better)
Translates to: VAGFGSGHPFGTRVLLTGLLRAR*WNSSHG
Trigger: CCCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAG...TCCAGTCAACAGAACTCTAGTCCCAAAGGGGTGGCCAGAGCCAAAGCCAGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR GCA 90 bp CTTCCGGCACTCCTGCCTTCCGGAACACGGAGGAGGCGTAGGCGTACACCGAGTTCTGCAATTGCCCCGTaGCTCTTCCTATCCAAGTCT +
Preference number: 2 (lower is better)
Translates to: LPALLPSGTRRRRRRTPSSAIAP*LFLSKS
Trigger: AGACTTGGATAGGAAGAGGCACGGGGCAATTGCAGA...ACTCGGTGTACGCCTACGCCTCCTCCGTGTTCCGGAAGGCAGGAGTGCCGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR GCA 90 bp GGCAAAGATGCAGGCCATGGCCAGGTAGAGTGTCCAGGGGAAGGAGCTCTGCAGCAGGGAGTCTGCAATTaGCCCGTGCCTCTTCCTATC +
Preference number: 2 (lower is better)
Translates to: GKDAGHGQVECPGEGALQQGVCN*PVPLPI
Trigger: GATAGGAAGAGGCACGGGGCAATTGCAGACTCCCTG...CTGCAGAGCTCCTTCCCCTGGACACTCTACCTGGCCATGGCCTGCATCTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR GCA 90 bp CTGCAGGCACAGGGCCACAGTGAAGATGCTCCCCCAGCAGGTCATCAGGCTGTACAGGGAGTCTGCAATTaGCCCGTGCCTCTTCCTATC +
Preference number: 2 (lower is better)
Translates to: LQAQGHSEDAPPAGHQAVQGVCN*PVPLPI
Trigger: GATAGGAAGAGGCACGGGGCAATTGCAGACTCCCTG...TACAGCCTGATGACCTGCTGGGGGAGCATCTTCACTGTGGCCCTGTGCCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR GCA 90 bp GCAGAGCTCCATGGCACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGAGAGGCCAGGCCAGATaGCTCTTTGCCAGAGTCCTA +
Preference number: 2 (lower is better)
Translates to: AELHGTAQNHEACHLSPQRGQAR*LFARVL
Trigger: TAGGACTCTGGCAAAGAGGCATCTGGCCTGGCCTCT...CTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR GCA 90 bp TTCCTTCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTGCTCCAAAGAGGCCTGCCAGATGGGAAAGATaGACTGGGCCTGATCCTGGG +
Preference number: 2 (lower is better)
Translates to: FLPSVMAKGPASSAPKRPARWER*TGPDPG
Trigger: CCCAGGATCAGGCCCAGTGCATCTTTCCCATCTGGC...AGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR-3UTR CCA 90 bp GGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAACCACGAGTCTCCCCCAGGTACATaGGCTGGATGTTCATGCTCA +
Preference number: 2 (lower is better)
Translates to: GVHRVIPAELHGTAQNHESPPGT*AGCSCS
Trigger: TGAGCATGAACATCCAGCCCATGTACCTGGGGGAGA...CTCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
3UTR-3UTR CCA 90 bp GCCTCCATGATAAAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGCTCAGGGCCCGATGCTaGAACAGCTCCCATGGGCGC +
Preference number: 2 (lower is better)
Translates to: ASMIKGNPRPTRMSMIHMLRARC*NSSHGR
Trigger: GCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAG...CATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTTTATCATGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR CCA 90 bp GCCACAGTGAAGATGCTCCCCCAGCAGGTCATCAGGCTGTACCCACCGATGAGCCCGATGATCGCGTACTaGATCTTCGCTTCCGGCACT +
Preference number: 2 (lower is better)
Translates to: ATVKMLPQQVIRLYPPMSPMIAY*IFASGT
Trigger: AGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGG...GCTCATCGGTGGGTACAGCCTGATGACCTGCTGGGGGAGCATCTTCACTGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR TCA 90 bp CCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAACAGCTAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 2 (lower is better)
Translates to: PEPRGLSPVSSGPDAGTASLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...AGCTGTTCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
3UTR-3UTR TCA 90 bp GCCACAGTGAAGATGCTCCCCCAGCAGGTCATCAGGCTGTACCCACCGATGAGCGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 2 (lower is better)
Translates to: ATVKMLPQQVIRLYPPMSAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...GCTCATCGGTGGGTACAGCCTGATGACCTGCTGGGGGAGCATCTTCACTGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
3UTR-3UTR TCA 90 bp ACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACCTGGGATTACAGTCATaGGCTGCCACAACCAGCCTG +
Preference number: 2 (lower is better)
Translates to: TPLSDEVGPPGMHTHTHYLGLQS*AATTSL
Trigger: CAGGCTGGTTGTGGCAGCTCATGACTGTAATCCCAG...GTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR TCA 90 bp CAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTCTGGGATTACAGTCATaGGCTGCCACAACCAGCCTG +
Preference number: 2 (lower is better)
Translates to: QLRQKAGQWFPRSGTGVGLGLQS*AATTSL
Trigger: CAGGCTGGTTGTGGCAGCTCATGACTGTAATCCCAG...ACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR TCA 90 bp GATTACCACACAACTAACAACCGCCGTGAGCAGCTCGCAGCTCCCAGTCCCGATGCTGCCTCAGCCTCCTaGGTAGCTAGAGCTGTTAGC +
Preference number: 2 (lower is better)
Translates to: DYHTTNNRREQLAAPSPDAASAS*VARAVS
Trigger: GCTAACAGCTCTAGCTACTCAGGAGGCTGAGGCAGC...ATCGGGACTGGGAGCTGCGAGCTGCTCACGGCGGTTGTTAGTTGTGTGGTAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR TCA 90 bp TTCCTTCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTGCTCCAAAGAGGCCTAAGATGCACTGGGCCTaGTCCTGGGAGAGTAGGTTG +
Preference number: 2 (lower is better)
Translates to: FLPSVMAKGPASSAPKRPKMHWA*SWESRL
Trigger: CAACCTACTCTCCCAGGATCAGGCCCAGTGCATCTT...AGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR-3UTR TCA 90 bp AGCAGTGCTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGGGACCACAAGATGCACTGGGCCTaGTCCTGGGAGAGTAGGTTG +
Preference number: 2 (lower is better)
Translates to: SSAPKRPPRGYRDTMRDHKMHWA*SWESRL
Trigger: CAACCTACTCTCCCAGGATCAGGCCCAGTGCATCTT...GTGGTCCCTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR-3UTR TCA 90 bp AGCAGTGCTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGGGACCACATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 2 (lower is better)
Translates to: SSAPKRPPRGYRDTMRDHISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...GTGGTCCCTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR-3UTR GCA 90 bp CACAGACACAGACACCAAGGAAAGGGACATAGAGGAAGTGGGACAAGGCCTCCACAGGGGAAGGAGCTCTaGAGGCACAGGGCCACAGTG +
Preference number: 2 (lower is better)
Translates to: HRHRHQGKGHRGSGTRPPQGKEL*RHRATV
Trigger: CACTGTGGCCCTGTGCCTGCAGAGCTCCTTCCCCTG...TGGAGGCCTTGTCCCACTTCCTCTATGTCCCTTTCCTTGGTGTCTGTGTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR CCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCCCTCCCACCCAGGTTaGGACCAAGAGAGGACAGGG +
Preference number: 2 (lower is better)
Translates to: PRLVSNFWSQSNLPILASPSHPG*DQERTG
Trigger: CCCTGTCCTCTCTTGGTCCCAACCTGGGTGGGAGGG...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR TCA 90 bp AGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTCACAAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 2 (lower is better)
Translates to: SSLGALSPRYMGWMFMLTSLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...TGTGAGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR-3UTR TCA 90 bp AGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTCACAGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 2 (lower is better)
Translates to: SSLGALSPRYMGWMFMLTAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...TGTGAGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR-3UTR TCA 90 bp GGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTACCACGCTCACCATTaGTTGCTAAGCACCTGGAGC +
Preference number: 2 (lower is better)
Translates to: GSPGLGLGWVTDSKWACGYHAHH*LLSTWS
Trigger: GCTCCAGGTGCTTAGCAATCAATGGTGAGCGTGGTA...CCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR TCA 90 bp GTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTACTCTTGGACTCAAGTaGTCCTGCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: VPQVWDWGGLLIANGHVGTLGLK*SCCLSL
Trigger: GAGGCTGAGGCAGCAGGATCACTTGAGTCCAAGAGT...ACCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR GCA 90 bp GAAGTGGGACAAGGCCTCCATGATAAAGGGAAATCCCAGGCCGACCAGGATGAGAGAGCTCCATGGCACTaGCCAGAACCACGAGGCTTG +
Preference number: 2 (lower is better)
Translates to: EVGQGLHDKGKSQADQDERAPWH*PEPRGL
Trigger: CAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCT...CTCATCCTGGTCGGCCTGGGATTTCCCTTTATCATGGAGGCCTTGTCCCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR GCA 90 bp GCCACAGTGAAGATGCTCCCCCAGCAGGTCATCAGGCTGTACCCACCGATGAGCACCTGGAGCCATGTCTaGACACAAAGGGTGCTCAAT +
Preference number: 2 (lower is better)
Translates to: ATVKMLPQQVIRLYPPMSTWSHV*TQRVLN
Trigger: ATTGAGCACCCTTTGTGTGCAGACATGGCTCCAGGT...GCTCATCGGTGGGTACAGCCTGATGACCTGCTGGGGGAGCATCTTCACTGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR GCA 90 bp GGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATTCGGGCCTCCTGGTATaGATACCCATACCCACTACA +
Preference number: 2 (lower is better)
Translates to: GRKQVSGSPGLGLGWVTDSGLLV*IPIPTT
Trigger: TGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGA...ATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR GCA 90 bp GTAGCTGGCTTTGGCTCTGGCCACCCCTTTGGGACTAGAGTTCTGTTGACTGGATCCCTGCAGGGAGTCTaGAATTGCCCCGTGCCTCTT +
Preference number: 2 (lower is better)
Translates to: VAGFGSGHPFGTRVLLTGSLQGV*NCPVPL
Trigger: AAGAGGCACGGGGCAATTGCAGACTCCCTGCAGGGA...TCCAGTCAACAGAACTCTAGTCCCAAAGGGGTGGCCAGAGCCAAAGCCAGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR CCA 90 bp CCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGAGCTCCTTATCTCCCCCAGGTACATaGGCTGGATGTTCATGCTCA +
Preference number: 2 (lower is better)
Translates to: PRAVKMAELMATAPRSSLSPPGT*AGCSCS
Trigger: TGAGCATGAACATCCAGCCCATGTACCTGGGGGAGA...TAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR-3UTR CCA 90 bp CGAAATACTCAATGCATGTGGGGGAGGGGTGCTTACCTGAGTCCGACCACCTGTAGATGGCTGAGCTCATaGCCACAGCTCCTCGGAGCT +
Preference number: 2 (lower is better)
Translates to: RNTQCMWGRGAYLSPTTCRWLSS*PQLLGA
Trigger: AGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCT...ACAGGTGGTCGGACTCAGGTAAGCACCCCTCCCCCACATGCATTGAGTATTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
3UTR-3UTR CCA 90 bp AGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGACAGTAGCTGGCTTTaGCTCTGGCCACCCCTTTGG +
Preference number: 2 (lower is better)
Translates to: SGSPGLGLGWVTDSKWACDSSWL*LWPPLW
Trigger: CCAAAGGGGTGGCCAGAGCCAAAGCCAGCTACTGTC...ACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
3UTR-3UTR CCA 90 bp CCATGGCACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGTTTCAAACTCTaGCCTCAATTGATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: PWHCPEPRGLSPVSSGPDAGFKL*PQLILP
Trigger: TGGGAGGATCAATTGAGGCCAGAGTTTGAAACCAGC...ATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTGCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR TCA 90 bp GCCTCCATGATAAAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCTCCCAGTCCCGATaGTCGCGTACTGGATCTTCG +
Preference number: 2 (lower is better)
Translates to: ASMIKGNPRPTRMSMIHMSSQSR*SRTGSS
Trigger: CGAAGATCCAGTACGCGATCATCGGGACTGGGAGCT...CATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTTTATCATGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR TCA 90 bp ACAGACACCAAGGAAAGGGACATAGAGGAAGTGGGACAAGGCCTCCATGATAAAGGCACAGGGCCACAGTaGAGATGCTCCCCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: TDTKERDIEEVGQGLHDKGTGPQ*RCSPSR
Trigger: CCTGCTGGGGGAGCATCTTCACTGTGGCCCTGTGCC...TTTATCATGGAGGCCTTGTCCCACTTCCTCTATGTCCCTTTCCTTGGTGTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR TCA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGTACCACGCTCACCATTaGTTGCTAAGCACCTGGAGC +
Preference number: 2 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGYHAHH*LLSTWS
Trigger: GCTCCAGGTGCTTAGCAATCAATGGTGAGCGTGGTA...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR TCA 90 bp GTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATACCACGCTCACCATTaGTTGCTAAGCACCTGGAGC +
Preference number: 2 (lower is better)
Translates to: VSGSPGLGLGWVTDSKWAYHAHH*LLSTWS
Trigger: GCTCCAGGTGCTTAGCAATCAATGGTGAGCGTGGTA...TGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR TCA 90 bp AGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTACTCTTGGACTCAAGTaGTCCTGCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SGSPGLGLGWVTDSKWACTLGLK*SCCLSL
Trigger: GAGGCTGAGGCAGCAGGATCACTTGAGTCCAAGAGT...ACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR GCA 90 bp GAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTCACCATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 2 (lower is better)
Translates to: ELLRGALPQVHGLDVHAHHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...GTGAGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR-3UTR GCA 90 bp AGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTTCAATTAGGACTCACTaGAGCCTCGACCTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: SGSPGLGLGWVTDSKWACSIRTH*SLDLPG
Trigger: GCCTGGGAGGTCGAGGCTGCAGTGAGTCCTAATTGA...ACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR GCA 90 bp GGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTTGTCCAGGCTGGAGTaGAGTGGCTCAATTAGGACT +
Preference number: 2 (lower is better)
Translates to: GSPGLGLGWVTDSKWACGLSRLE*SGSIRT
Trigger: AGTCCTAATTGAGCCACTGCACTCCAGCCTGGACAA...CCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR GCA 90 bp AGCAGTGCTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGGGACCACTCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 2 (lower is better)
Translates to: SSAPKRPPRGYRDTMRDHSPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...GTGGTCCCTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR-3UTR CCA 90 bp TGTCCCATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTTCTCCCCCAGGTACATaGGCTGGATGTTCATGCTCA +
Preference number: 2 (lower is better)
Translates to: CPITIPRAVKMAELMATASPPGT*AGCSCS
Trigger: TGAGCATGAACATCCAGCCCATGTACCTGGGGGAGA...AGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGATGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR-3UTR CCA 90 bp GTAGCTGGCTTTGGCTCTGGCCACCCCTTTGGGACTAGAGTTCTGTTGACTGGACCGATGATCGCGTACTaGATCTTCGCTTCCGGCACT +
Preference number: 2 (lower is better)
Translates to: VAGFGSGHPFGTRVLLTGPMIAY*IFASGT
Trigger: AGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGG...TCCAGTCAACAGAACTCTAGTCCCAAAGGGGTGGCCAGAGCCAAAGCCAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR CCA 90 bp CACAGACACAGACACCAAGGAAAGGGACATAGAGGAAGTGGGACAAGGCCTCCAGGTCAAACAGCTCTGTaGCCAGGATCCCCGTCACTC +
Preference number: 2 (lower is better)
Translates to: HRHRHQGKGHRGSGTRPPGQTAL*PGSPSL
Trigger: GAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACC...TGGAGGCCTTGTCCCACTTCCTCTATGTCCCTTTCCTTGGTGTCTGTGTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR CCA 90 bp CCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTGCTGGTTTCAAACTCTaGCCTCAATTGATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: PLPSQTRSGLLVCIPIPTAGFKL*PQLILP
Trigger: TGGGAGGATCAATTGAGGCCAGAGTTTGAAACCAGC...AGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CCA 90 bp CTGCCTTCCGGAACACGGAGGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGACTATGTTACCTAGGCTaGTTTCAAACTCTGGCCTCA +
Preference number: 2 (lower is better)
Translates to: LPSGTRRRRRRTPSHSRRLCYLG*FQTLAS
Trigger: TGAGGCCAGAGTTTGAAACCAGCCTAGGTAACATAG...TCTGCGGGAATGACTCGGTGTACGCCTACGCCTCCTCCGTGTTCCGGAAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR CCA 90 bp GTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTCTATGTGGCCCAGGCTaGTCTCAAACTTCTGGTCTC +
Preference number: 2 (lower is better)
Translates to: VPQVWDWGGLLIANGHVGLCGPG*SQTSGL
Trigger: GAGACCAGAAGTTTGAGACCAGCCTGGGCCACATAG...ACCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CCA 90 bp CCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTCTATGTGGCCCAGGCTaGTCTCAAACTTCTGGTCTC +
Preference number: 2 (lower is better)
Translates to: PLRRGRASWYAYPYPLQPLCGPG*SQTSGL
Trigger: GAGACCAGAAGTTTGAGACCAGCCTGGGCCACATAG...AGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CCA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGCTATGTGGCCCAGGCTaGTCTCAAACTTCTGGTCTC +
Preference number: 2 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGLCGPG*SQTSGL
Trigger: GAGACCAGAAGTTTGAGACCAGCCTGGGCCACATAG...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR TCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTCTGGGATTACAGTCATaGGCTGCCACAACCAGCCTG +
Preference number: 2 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCILGLQS*AATTSL
Trigger: CAGGCTGGTTGTGGCAGCTCATGACTGTAATCCCAG...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR TCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCACTCTTGGACTCAAGTaGTCCTGCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: PRLVSNFWSQSNLPILASTLGLK*SCCLSL
Trigger: GAGGCTGAGGCAGCAGGATCACTTGAGTCCAAGAGT...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR TCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCTGTCTCCACAGTCAATaGGGAGGTAGCGCGGGCTTT +
Preference number: 2 (lower is better)
Translates to: PRLVSNFWSQSNLPILASCLHSQ*GGSAGF
Trigger: AAAGCCCGCGCTACCTCCTCATTGACTGTGGAGACA...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR TCA 90 bp CCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTGCTCCAAAGAGGCCTCCCAGGGCCATGTCTCATTGGTaGATTCCTGAATGTGATTTA +
Preference number: 2 (lower is better)
Translates to: PSVMAKGPASSAPKRPPRAMSHW*IPECDL
Trigger: TAAATCACATTCAGGAATTCACCAATGAGACATGGC...CCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR-3UTR GCA 90 bp AGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTCACACATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 2 (lower is better)
Translates to: SSLGALSPRYMGWMFMLTHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...TGTGAGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR-3UTR GCA 90 bp CCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTACCTGGAGCCATGTCTaGACACAAAGGGTGCTCAAT +
Preference number: 2 (lower is better)
Translates to: PLRRGRASWYAYPYPLQPTWSHV*TQRVLN
Trigger: ATTGAGCACCCTTTGTGTGCAGACATGGCTCCAGGT...AGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR GCA 90 bp AGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTTCGGGCCTCCTGGTATaGATACCCATACCCACTACA +
Preference number: 2 (lower is better)
Translates to: SGSPGLGLGWVTDSKWACSGLLV*IPIPTT
Trigger: TGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGA...ACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR GCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCATCCCTGCAGGGAGTCTaGAATTGCCCCGTGCCTCTT +
Preference number: 2 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPSLQGV*NCPVPL
Trigger: AAGAGGCACGGGGCAATTGCAGACTCCCTGCAGGGA...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR CCA 90 bp CACAGACACAGACACCAAGGAAAGGGACATAGAGGAAGTGGGACAAGGCCTCCACCGATGATCGCGTACTaGATCTTCGCTTCCGGCACT +
Preference number: 2 (lower is better)
Translates to: HRHRHQGKGHRGSGTRPPPMIAY*IFASGT
Trigger: AGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGG...TGGAGGCCTTGTCCCACTTCCTCTATGTCCCTTTCCTTGGTGTCTGTGTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR CCA 90 bp CCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTCTATGTTACCTAGGCTaGTTTCAAACTCTGGCCTCA +
Preference number: 2 (lower is better)
Translates to: PLPSQTRSGLLVCIPIPTLCYLG*FQTLAS
Trigger: TGAGGCCAGAGTTTGAAACCAGCCTAGGTAACATAG...AGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CCA 90 bp ACAACTAACAACCGCCGTGAGCAGCTCGCAGCTCCCAGTCCCGATGATCGCGTAGCTACCTTGAACTCTTaGACTCAAGTGATCCTGCTG +
Preference number: 2 (lower is better)
Translates to: TTNNRREQLAAPSPDDRVATLNS*TQVILL
Trigger: CAGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGC...TACGCGATCATCGGGACTGGGAGCTGCGAGCTGCTCACGGCGGTTGTTAGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR CCA 90 bp GGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGGCTACCTTGAACTCTTaGACTCAAGTGATCCTGCTG +
Preference number: 2 (lower is better)
Translates to: GSPGLGLGWVTDSKWACGATLNS*TQVILL
Trigger: CAGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGC...CCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CCA 90 bp GGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATCAGTCTGGCATGCAGTaGTGTGATTGTAGCTTACTG +
Preference number: 2 (lower is better)
Translates to: GRKQVSGSPGLGLGWVTDQSGMQ*CDCSLL
Trigger: CAGTAAGCTACAATCACACCACTGCATGCCAGACTG...ATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CCA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTTACTGATAGCAAATaGGCATGTGGGTGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGVTDSK*ACGCLG
Trigger: CCCAAGGCACCCACATGCCCATTTGCTATCAGTAAC...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR TCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCTACCACGCTCACCATTaGTTGCTAAGCACCTGGAGC +
Preference number: 2 (lower is better)
Translates to: PRLVSNFWSQSNLPILASYHAHH*LLSTWS
Trigger: GCTCCAGGTGCTTAGCAATCAATGGTGAGCGTGGTA...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR GCA 90 bp GTAGTGCTGAGTCCGACCACCTGTCCCATCACGATCCCCAGAGCCGTAAAGATGCATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 2 (lower is better)
Translates to: VVLSPTTCPITIPRAVKMHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...CATCTTTACGGCTCTGGGGATCGTGATGGGACAGGTGGTCGGACTCAGCACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
3UTR-3UTR GCA 90 bp AGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTACCTGGAGCCATGTCTaGACACAAAGGGTGCTCAAT +
Preference number: 2 (lower is better)
Translates to: SGSPGLGLGWVTDSKWACTWSHV*TQRVLN
Trigger: ATTGAGCACCCTTTGTGTGCAGACATGGCTCCAGGT...ACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR GCA 90 bp GCCACAGTGAAGATGCTCCCCCAGCAGGTCATCAGGCTGTACCCACCGATGAGCGTGATTGTAGCTTACTaGTACCTTGAACTCTTGGAC +
Preference number: 2 (lower is better)
Translates to: ATVKMLPQQVIRLYPPMSVIVAY*YLELLD
Trigger: GTCCAAGAGTTCAAGGTAGCAGTAAGCTACAATCAC...GCTCATCGGTGGGTACAGCCTGATGACCTGCTGGGGGAGCATCTTCACTGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR GCA 90 bp ACAGACACCAAGGAAAGGGACATAGAGGAAGTGGGACAAGGCCTCCATGATAAAACCACCCTGCTCTCCTaGCCACCTACACACCTCCCT +
Preference number: 2 (lower is better)
Translates to: TDTKERDIEEVGQGLHDKTTLLS*PPTHLP
Trigger: AGGGAGGTGTGTAGGTGGGCAGGAGAGCAGGGTGGT...TTTATCATGGAGGCCTTGTCCCACTTCCTCTATGTCCCTTTCCTTGGTGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR CCA 90 bp CACAGACACAGACACCAAGGAAAGGGACATAGAGGAAGTGGGACAAGGCCTCCAGGAAGGTCTTGCCTTTaGTCTCAGGAAGGAACAGGC +
Preference number: 2 (lower is better)
Translates to: HRHRHQGKGHRGSGTRPPGRSCL*SQEGTG
Trigger: GCCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCC...TGGAGGCCTTGTCCCACTTCCTCTATGTCCCTTTCCTTGGTGTCTGTGTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR CCA 90 bp GTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTGCTGGTTTCAAACTCTaGCCTCAATTGATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: VPQVWDWGGLLIANGHVGAGFKL*PQLILP
Trigger: TGGGAGGATCAATTGAGGCCAGAGTTTGAAACCAGC...ACCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CCA 90 bp GTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTGCTACCTTGAACTCTTaGACTCAAGTGATCCTGCTG +
Preference number: 2 (lower is better)
Translates to: VPQVWDWGGLLIANGHVGATLNS*TQVILL
Trigger: CAGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGC...ACCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CCA 90 bp CCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACATCAGCCACCTCACCTaGCCAACCTGTATTTTTCTT +
Preference number: 2 (lower is better)
Translates to: PLSDEVGPPGMHTHTHYNISHLT*PTCIFL
Trigger: AAGAAAAATACAGGTTGGCCAGGTGAGGTGGCTGAT...GTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTCTATGTGGCCCAGGCTaGTCTCAAACTTCTGGTCTC +
Preference number: 2 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCILCGPG*SQTSGL
Trigger: GAGACCAGAAGTTTGAGACCAGCCTGGGCCACATAG...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR TCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCATACCACGCTCACCATTaGTTGCTAAGCACCTGGAGC +
Preference number: 2 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPYHAHH*LLSTWS
Trigger: GCTCCAGGTGCTTAGCAATCAATGGTGAGCGTGGTA...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR TCA 90 bp AATACTCAATGCATGTGGGGGAGGGGTGCTTACCTGAGTCCGACCACCTGTCCCGGGGAGACATTTAGGTaGAGAAACGCTTTTACTGGT +
Preference number: 2 (lower is better)
Translates to: NTQCMWGRGAYLSPTTCPGETFR*RNAFTG
Trigger: ACCAGTAAAAGCGTTTCTTCACCTAAATGTCTCCCC...GGGACAGGTGGTCGGACTCAGGTAAGCACCCCTCCCCCACATGCATTGAGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
3UTR-3UTR GCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCACCTGGAGCCATGTCTaGACACAAAGGGTGCTCAAT +
Preference number: 2 (lower is better)
Translates to: PRLVSNFWSQSNLPILASTWSHV*TQRVLN
Trigger: ATTGAGCACCCTTTGTGTGCAGACATGGCTCCAGGT...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR GCA 90 bp CAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTGTGATTGTAGCTTACTaGTACCTTGAACTCTTGGAC +
Preference number: 2 (lower is better)
Translates to: QLRQKAGQWFPRSGTGVGVIVAY*YLELLD
Trigger: GTCCAAGAGTTCAAGGTAGCAGTAAGCTACAATCAC...ACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CCA 90 bp AGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGCTGGTTTCAAACTCTaGCCTCAATTGATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: SGSPGLGLGWVTDSKWACAGFKL*PQLILP
Trigger: TGGGAGGATCAATTGAGGCCAGAGTTTGAAACCAGC...ACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CCA 90 bp CTGTTCCCCTACTCCCCACGGTGCAGATATGAGCCCAGTGGTCTAATCCAGTCTCCAGTGCTGGTGCTATaGTTTGAAGGTTTGTGTCTC +
Preference number: 2 (lower is better)
Translates to: LFPYSPRCRYEPSGLIQSPVLVL*FEGLCL
Trigger: GAGACACAAACCTTCAAACCATAGCACCAGCACTGG...AGACTGGATTAGACCACTGGGCTCATATCTGCACCGTGGGGAGTAGGGGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403208.7
3UTR-3UTR TCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTACTCTTGGACTCAAGTaGTCCTGCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLTLGLK*SCCLSL
Trigger: GAGGCTGAGGCAGCAGGATCACTTGAGTCCAAGAGT...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR GCA 90 bp CTGGATGTTCATGCTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATCATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 2 (lower is better)
Translates to: LDVHAHTCIDSHEQSSQHHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...ATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAACATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR-3UTR GCA 90 bp GTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTGTGATTGTAGCTTACTaGTACCTTGAACTCTTGGAC +
Preference number: 2 (lower is better)
Translates to: VPQVWDWGGLLIANGHVGVIVAY*YLELLD
Trigger: GTCCAAGAGTTCAAGGTAGCAGTAAGCTACAATCAC...ACCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CCA 90 bp GTAGCTGGCTTTGGCTCTGGCCACCCCTTTGGGACTAGAGTTCTGTTGACTGGAATCAGCCACCTCACCTaGCCAACCTGTATTTTTCTT +
Preference number: 2 (lower is better)
Translates to: VAGFGSGHPFGTRVLLTGISHLT*PTCIFL
Trigger: AAGAAAAATACAGGTTGGCCAGGTGAGGTGGCTGAT...TCCAGTCAACAGAACTCTAGTCCCAAAGGGGTGGCCAGAGCCAAAGCCAGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR TCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTTACCACGCTCACCATTaGTTGCTAAGCACCTGGAGC +
Preference number: 2 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLYHAHH*LLSTWS
Trigger: GCTCCAGGTGCTTAGCAATCAATGGTGAGCGTGGTA...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR TCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTCTGGGATTACAGTCATaGGCTGCCACAACCAGCCTG +
Preference number: 2 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFLGLQS*AATTSL
Trigger: CAGGCTGGTTGTGGCAGCTCATGACTGTAATCCCAG...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR TCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTACTCTTGGACTCAAGTaGTCCTGCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFTLGLK*SCCLSL
Trigger: GAGGCTGAGGCAGCAGGATCACTTGAGTCCAAGAGT...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR TCA 90 bp ACCTGCAAGCAGTGCTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGGCCATGTCTCATTGGTaGATTCCTGAATGTGATTTA +
Preference number: 2 (lower is better)
Translates to: TCKQCSKEASQGIQRHDEAMSHW*IPECDL
Trigger: TAAATCACATTCAGGAATTCACCAATGAGACATGGC...CTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR-3UTR GCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTTCAATTAGGACTCACTaGAGCCTCGACCTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFSIRTH*SLDLPG
Trigger: GCCTGGGAGGTCGAGGCTGCAGTGAGTCCTAATTGA...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCTATGTTACCTAGGCTaGTTTCAAACTCTGGCCTCA +
Preference number: 2 (lower is better)
Translates to: PRLVSNFWSQSNLPILASLCYLG*FQTLAS
Trigger: TGAGGCCAGAGTTTGAAACCAGCCTAGGTAACATAG...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR CCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTCTATGTTACCTAGGCTaGTTTCAAACTCTGGCCTCA +
Preference number: 2 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCILCYLG*FQTLAS
Trigger: TGAGGCCAGAGTTTGAAACCAGCCTAGGTAACATAG...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAGCTACCTTGAACTCTTaGACTCAAGTGATCCTGCTG +
Preference number: 2 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPATLNS*TQVILL
Trigger: CAGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGC...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR CCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCACTATGTTACCTAGGCTaGTTTCAAACTCTGGCCTCA +
Preference number: 2 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPLCYLG*FQTLAS
Trigger: TGAGGCCAGAGTTTGAAACCAGCCTAGGTAACATAG...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR GCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAGTGATTGTAGCTTACTaGTACCTTGAACTCTTGGAC +
Preference number: 2 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPVIVAY*YLELLD
Trigger: GTCCAAGAGTTCAAGGTAGCAGTAAGCTACAATCAC...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR GCA 90 bp TCCCAAAAACTTTATCTGGAGCCAAGCCAGACACAAATGTGTACATACAGTACGTCAATTAGGACTCACTaGAGCCTCGACCTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: SQKLYLEPSQTQMCTYSTSIRTH*SLDLPG
Trigger: GCCTGGGAGGTCGAGGCTGCAGTGAGTCCTAATTGA...CGTACTGTATGTACACATTTGTGTCTGGCTTGGCTCCAGATAAAGTTTTTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
3UTR-3UTR GCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAAGAGTCCTACCACCCTaGTCTCCTGCCCACCTACAC +
Preference number: 2 (lower is better)
Translates to: SHELPQPACNYVVTDFLSRVLPP*SPAHLH
Trigger: GTGTAGGTGGGCAGGAGAGCAGGGTGGTAGGACTCT...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR CCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGCTGGTTTCAAACTCTaGCCTCAATTGATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLAGFKL*PQLILP
Trigger: TGGGAGGATCAATTGAGGCCAGAGTTTGAAACCAGC...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR TCA 90 bp CGTGAATTGGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAGGGGAGACATTTAGGTaGAGAAACGCTTTTACTGGT +
Preference number: 2 (lower is better)
Translates to: RELAAEMWIEDSMPSCKAGETFR*RNAFTG
Trigger: ACCAGTAAAAGCGTTTCTTCACCTAAATGTCTCCCC...TGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCCAATTCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
3UTR-3UTR CCA 90 bp CTCCTAATACGTGCAACAACATTCATGAATCCCAAAAACTTTATCTGGAGCCAAGACAGTAGCTGGCTTTaGCTCTGGCCACCCCTTTGG +
Preference number: 2 (lower is better)
Translates to: LLIRATTFMNPKNFIWSQDSSWL*LWPPLW
Trigger: CCAAAGGGGTGGCCAGAGCCAAAGCCAGCTACTGTC...TTGGCTCCAGATAAAGTTTTTGGGATTCATGAATGTTGTTGCACGTATTAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
3UTR-3UTR CCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTCTATGTTACCTAGGCTaGTTTCAAACTCTGGCCTCA +
Preference number: 2 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLLCYLG*FQTLAS
Trigger: TGAGGCCAGAGTTTGAAACCAGCCTAGGTAACATAG...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR GCA 90 bp ATCTTGATCACGGTGGTGTTTCCCAAGTGTATACACTCACCAAAACTATACTTATCAATTAGGACTCACTaGAGCCTCGACCTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: ILITVVFPKCIHSPKLYLSIRTH*SLDLPG
Trigger: GCCTGGGAGGTCGAGGCTGCAGTGAGTCCTAATTGA...TAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAACACCACCGTGATCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR GCA 90 bp GGAATACTACTCAGCAATACAAAGGAGTCTCTCCTAATACGTGCAACAACATTCTCGGGCCTCCTGGTATaGATACCCATACCCACTACA +
Preference number: 2 (lower is better)
Translates to: GILLSNTKESLLIRATTFSGLLV*IPIPTT
Trigger: TGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGA...GAATGTTGTTGCACGTATTAGGAGAGACTCCTTTGTATTGCTGAGTAGTATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
3UTR-3UTR GCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAACCTGGAGCCATGTCTaGACACAAAGGGTGCTCAAT +
Preference number: 2 (lower is better)
Translates to: SHELPQPACNYVVTDFLSTWSHV*TQRVLN
Trigger: ATTGAGCACCCTTTGTGTGCAGACATGGCTCCAGGT...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR GCA 90 bp ATCTTGATCACGGTGGTGTTTCCCAAGTGTATACACTCACCAAAACTATACTTATTGTCCAGGCTGGAGTaGAGTGGCTCAATTAGGACT +
Preference number: 2 (lower is better)
Translates to: ILITVVFPKCIHSPKLYLLSRLE*SGSIRT
Trigger: AGTCCTAATTGAGCCACTGCACTCCAGCCTGGACAA...TAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAACACCACCGTGATCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CCA 90 bp TCCCAAAAACTTTATCTGGAGCCAAGCCAGACACAAATGTGTACATACAGTACGATCAGCCACCTCACCTaGCCAACCTGTATTTTTCTT +
Preference number: 2 (lower is better)
Translates to: SQKLYLEPSQTQMCTYSTISHLT*PTCIFL
Trigger: AAGAAAAATACAGGTTGGCCAGGTGAGGTGGCTGAT...CGTACTGTATGTACACATTTGTGTCTGGCTTGGCTCCAGATAAAGTTTTTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
3UTR-3UTR CCA 90 bp GGGAGACATTTAGGTGAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGTTGGCAGCAGAGATGTaGATAGAGGATTCGATGCCT +
Preference number: 2 (lower is better)
Translates to: GRHLGEETLLLVSPKYSMLAAEM*IEDSMP
Trigger: AGGCATCGAATCCTCTATCCACATCTCTGCTGCCAA...CATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTCACCTAAATGTCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
3UTR-3UTR GCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTACCTGGAGCCATGTCTaGACACAAAGGGTGCTCAAT +
Preference number: 2 (lower is better)
Translates to: MLLLIFCQLITFSLEYHATWSHV*TQRVLN
Trigger: ATTGAGCACCCTTTGTGTGCAGACATGGCTCCAGGT...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR CCA 90 bp AGATGGATAAATAAATCATGGTCTAACCACAGAGGGGAATACTACTCAGCAATAGTTACTGATAGCAAATaGGCATGTGGGTGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: RWINKSWSNHRGEYYSAIVTDSK*ACGCLG
Trigger: CCCAAGGCACCCACATGCCCATTTGCTATCAGTAAC...TATTGCTGAGTAGTATTCCCCTCTGTGGTTAGACCATGATTTATTTATCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
3UTR-3UTR TCA 90 bp AAGCCAGACACAAATGTGTACATACAGTACGGAATGACTTCAGATTCTGAAAAAGCAAATCTGACCAATTaGGGCAGAAAGCAGGTCAGT +
Preference number: 2 (lower is better)
Translates to: KPDTNVYIQYGMTSDSEKANLTN*GRKQVS
Trigger: ACTGACCTGCTTTCTGCCTCAATTGGTCAGATTTGC...TTTTTCAGAATCTGAAGTCATTCCGTACTGTATGTACACATTTGTGTCTGGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
3UTR-3UTR TCA 90 bp AGATGGATAAATAAATCATGGTCTAACCACAGAGGGGAATACTACTCAGCAATAGCAAATCTGACCAATTaGGGCAGAAAGCAGGTCAGT +
Preference number: 2 (lower is better)
Translates to: RWINKSWSNHRGEYYSAIANLTN*GRKQVS
Trigger: ACTGACCTGCTTTCTGCCTCAATTGGTCAGATTTGC...TATTGCTGAGTAGTATTCCCCTCTGTGGTTAGACCATGATTTATTTATCCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
3UTR-3UTR TCA 90 bp CATTTAGGTGAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGCATGTGGGGGAGACATTTAGGTaGAGAAACGCTTTTACTGGT +
Preference number: 2 (lower is better)
Translates to: HLGEETLLLVSPKYSMHVGETFR*RNAFTG
Trigger: ACCAGTAAAAGCGTTTCTTCACCTAAATGTCTCCCC...CACATGCATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTCACCTAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000405847.5
ENST00000423972.5
ENST00000625546.2
ENST00000628119.2
3UTR-3UTR CCA 90 bp TTTCCCAAGTGTATACACTCACCAAAACTATACTTAGAACTCAAAACTCGCCAACAGTCTGGCATGCAGTaGTGTGATTGTAGCTTACTG +
Preference number: 2 (lower is better)
Translates to: FPKCIHSPKLYLELKTRQQSGMQ*CDCSLL
Trigger: CAGTAAGCTACAATCACACCACTGCATGCCAGACTG...TTGGCGAGTTTTGAGTTCTAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR CCA 72 bp ACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTaGAACAGCTCCCATGGGCGCCGGGCACGGCAGCCC +
Preference number: 3 (lower is better)
Translates to: TRLVTCLLRARC*NSSHGRRARQP
Trigger: GGGCTGCCGTGCCCGGCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR CCA 72 bp AGGCAGCAGGCCTGGCCATCTGGTCAAACAGCTCTGTaGCCAGGATCCCCGTCACTCCGGCAGGGCCAATGC +
Preference number: 3 (lower is better)
Translates to: RQQAWPSGQTAL*PGSPSLRQGQC
Trigger: GCATTGGCCCTGCCGGAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACCAGATGGCCAGGCCTGCTGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR CCA 72 bp GCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTaGTCAAACAGCTCTGTGGCCAGGATCCCCGTCACT +
Preference number: 3 (lower is better)
Translates to: APQTMQAAGLAI*SNSSVARIPVT
Trigger: AGTGACGGGGATCCTGGCCACAGAGCTGTTTGACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR TCA 72 bp TGCTCCCCCAGCAGGTCATCAGGCTGTACCCACCGATaGGCAGCACGCGCCGACCCACCCTCTCGATTACCA +
Preference number: 3 (lower is better)
Translates to: CSPSRSSGCTHR*AARADPPSRLP
Trigger: TGGTAATCGAGAGGGTGGGTCGGCGCGTGCTGCTCATCGGTGGGTACAGCCTGATGACCTGCTGGGGGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR TCA 72 bp GTGCTGCCAGGCAGGCCTCGGTGTCTCCACAGTCAATaGGGAGGTAGCGCGGGCTTTCAGGGAGCAGAGGCA +
Preference number: 3 (lower is better)
Translates to: VLPGRPRCLHSQ*GGSAGFQGAEA
Trigger: TGCCTCTGCTCCCTGAAAGCCCGCGCTACCTCCTCATTGACTGTGGAGACACCGAGGCCTGCCTGGCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR CAA 90 bp GCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGTCAAAGGAGCCTGCTTaGCGGCTGAATCCAAACAGG +
Preference number: 3 (lower is better)
Translates to: ATAPRSSLGALSPRYMGWSKEPA*RLNPNR
Trigger: CCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGA...CCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR-3UTR CAA 90 bp GCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGCTCACACCTGCATaGACTCCCACGAGCAGTCTT +
Preference number: 3 (lower is better)
Translates to: ATAPRSSLGALSPRYMGWMLTPA*TPTSSL
Trigger: AAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCAT...CCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR CCA 72 bp AGCAGCTCGCAGCTCCCAGTCCCGATGATCGCGTACTaGATCTTCGCTTCCGGCACTCCTGCCTTCCGGAAC +
Preference number: 3 (lower is better)
Translates to: SSSQLPVPMIAY*IFASGTPAFRN
Trigger: GTTCCGGAAGGCAGGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGGGACTGGGAGCTGCGAGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR GCA 72 bp GATGATCGCGTACTGGATCTTCGCTTCCGGCACTCCTaGCTTCCGGAACACGGAGGAGGCGTAGGCGTACAC +
Preference number: 3 (lower is better)
Translates to: DDRVLDLRFRHS*LPEHGGGVGVH
Trigger: GTGTACGCCTACGCCTCCTCCGTGTTCCGGAAGGCAGGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR GCA 72 bp CCTTCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAGGGGATACAGAGACAC +
Preference number: 3 (lower is better)
Translates to: PSQRDGQGTCKQ*SKEASQGIQRH
Trigger: GTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR CCA 72 bp TCTGGGTCTGAACATCAAGATCCCTCCCACCCAGGTTaGGACCAAGAGAGGACAGGGCCACTGCCCCACCTC +
Preference number: 3 (lower is better)
Translates to: SGSEHQDPSHPG*DQERTGPLPHL
Trigger: GAGGTGGGGCAGTGGCCCTGTCCTCTCTTGGTCCCAACCTGGGTGGGAGGGATCTTGATGTTCAGACCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR CAA 90 bp GCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATTCAAAGGAGCCTGCTTaGCGGCTGAATCCAAACAGG +
Preference number: 3 (lower is better)
Translates to: AHGHSSSELLRGALPQVHSKEPA*RLNPNR
Trigger: CCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGA...ATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR-3UTR CAA 90 bp GCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATATGCTCACACCTGCATaGACTCCCACGAGCAGTCTT +
Preference number: 3 (lower is better)
Translates to: AHGHSSSELLRGALPQVHMLTPA*TPTSSL
Trigger: AAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCAT...ATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR-3UTR CAA 90 bp AGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAACCACGAGCAGGGAGTCTGCAATaGCCCCGTGCCTCTTCCTAT +
Preference number: 3 (lower is better)
Translates to: RRTPSHSRRAPWHCPEPRAGSLQ*PRASSY
Trigger: ATAGGAAGAGGCACGGGGCAATTGCAGACTCCCTGC...TCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR TCA 72 bp CTGTCCCATCACGATCCCCAGAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCCTCGGAGCTCCTTAGG +
Preference number: 3 (lower is better)
Translates to: LSHHDPQSRKDG*AHGHSSSELLR
Trigger: CCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGATGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
3UTR TCA 72 bp TTGGCTCTGGCCACCCCTTTGGGACTAGAGTTCTGTTaGCTGGATAACCTCCAGGCTCCTCCACGTGGGGCC +
Preference number: 3 (lower is better)
Translates to: LALATPLGLEFC*LDNLQAPPRGA
Trigger: GGCCCCACGTGGAGGAGCCTGGAGGTTATCCAGTCAACAGAACTCTAGTCCCAAAGGGGTGGCCAGAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR GCA 72 bp ATGCCTCTTTGCCAGAGTCCTACCACCCTGCTCTCCTaGCCACCTACACACCTCCCTGCAGGGAGTCTGCAA +
Preference number: 3 (lower is better)
Translates to: MPLCQSPTTLLS*PPTHLPAGSLQ
Trigger: TTGCAGACTCCCTGCAGGGAGGTGTGTAGGTGGGCAGGAGAGCAGGGTGGTAGGACTCTGGCAAAGAGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR CAA 90 bp CACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGATCAAAGGAGCCTGCTTaGCGGCTGAATCCAAACAGG +
Preference number: 3 (lower is better)
Translates to: HCPEPRGLSPVSSGPDAGSKEPA*RLNPNR
Trigger: CCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGA...TCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
3UTR-3UTR CAA 90 bp TTCCTTCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTGCTCCAAAGAGGCCTTCCTGGGAGAGTAGGTaGCTAGAGGCTTCCATGTCC +
Preference number: 3 (lower is better)
Translates to: FLPSVMAKGPASSAPKRPSWESR*LEASMS
Trigger: GGACATGGAAGCCTCTAGCAACCTACTCTCCCAGGA...AGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR TCA 72 bp AGAGACACGATGAGGGACCACATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCAGTACGCGCCTGCCAT +
Preference number: 3 (lower is better)
Translates to: RDTMRDHISRTR*SGSGSPVRACH
Trigger: ATGGCAGGCGCGTACTGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTATGTGGTCCCTCATCGTGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR-3UTR CAA 90 bp ACCTGCAAGCAGTGCTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGTCCTGGGAGAGTAGGTaGCTAGAGGCTTCCATGTCC +
Preference number: 3 (lower is better)
Translates to: TCKQCSKEASQGIQRHDESWESR*LEASMS
Trigger: GGACATGGAAGCCTCTAGCAACCTACTCTCCCAGGA...CTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR CCA 72 bp AAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTaGGTTACTGATAGCAAATGGGCATGTGGGTGCCTT +
Preference number: 3 (lower is better)
Translates to: KQVSGSPGLGLG*VTDSKWACGCL
Trigger: AAGGCACCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR CCA 72 bp GCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTaGGGTGGGTTACTGATAGCAAATGGGCATGTGGGT +
Preference number: 3 (lower is better)
Translates to: AESRSVVPQVWD*GGLLIANGHVG
Trigger: ACCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CAA 90 bp GGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTGCTACCTTGAACTCTaGGACTCAAGTGATCCTGCT +
Preference number: 3 (lower is better)
Translates to: GSPGLGLGWVTDSKWACGCYLEL*DSSDPA
Trigger: AGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGCA...CCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CAA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAAGGCCAGATGCCTCTTaGCCAGAGTCCTACCACCCT +
Preference number: 3 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPRPDAS*PESYHP
Trigger: AGGGTGGTAGGACTCTGGCAAAGAGGCATCTGGCCT...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR TCA 72 bp TTTGCGACTGTTCCCCTACTCCCCACGGTGCAGATATaGGCCCAGTGGTCTAATCCAGTCTTGCTGATCCAG +
Preference number: 3 (lower is better)
Translates to: FATVPLLPTVQI*AQWSNPVLLIQ
Trigger: CTGGATCAGCAAGACTGGATTAGACCACTGGGCTCATATCTGCACCGTGGGGAGTAGGGGAACAGTCGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403208.7
3UTR GCA 72 bp GTATCTCCGAAATACTCAATGCATGTGGGGGAGGGGTaGTTACCTGAGTCCGACCACCTGTCCCATCACGAT +
Preference number: 3 (lower is better)
Translates to: VSPKYSMHVGEG*LPESDHLSHHD
Trigger: ATCGTGATGGGACAGGTGGTCGGACTCAGGTAAGCACCCCTCCCCCACATGCATTGAGTATTTCGGAGATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
3UTR CCA 72 bp TGCCTTTGGTCTCAGGAAGGAACAGGCCAGTGTAGATaGCCCCACAGACACAGACACCAAGGAAAGGGACAT +
Preference number: 3 (lower is better)
Translates to: CLWSQEGTGQCR*PHRHRHQGKGH
Trigger: ATGTCCCTTTCCTTGGTGTCTGTGTCTGTGGGGCCATCTACACTGGCCTGTTCCTTCCTGAGACCAAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR CCA 72 bp ATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTaGGACTGGGGTGGGTTACTGATAGCAAATGGGCAT +
Preference number: 3 (lower is better)
Translates to: IEAESRSVVPQV*DWGGLLIANGH
Trigger: ATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR TCA 72 bp CTCATGAATAGCCAGATGGGAAAGATGCACTGGGCCTaGTCCTGGGAGAGTAGGTTGCTAGAGGCTTCCATG +
Preference number: 3 (lower is better)
Translates to: LMNSQMGKMHWA*SWESRLLEASM
Trigger: CATGGAAGCCTCTAGCAACCTACTCTCCCAGGATCAGGCCCAGTGCATCTTTCCCATCTGGCTATTCATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR-3UTR CAA 90 bp CACAGACACAGACACCAAGGAAAGGGACATAGAGGAAGTGGGACAAGGCCTCCAATCTCTTGGAAGGTCTaGCCTTTGGTCTCAGGAAGG +
Preference number: 3 (lower is better)
Translates to: HRHRHQGKGHRGSGTRPPISWKV*PLVSGR
Trigger: CCTTCCTGAGACCAAAGGCAAGACCTTCCAAGAGAT...TGGAGGCCTTGTCCCACTTCCTCTATGTCCCTTTCCTTGGTGTCTGTGTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR CAA 90 bp GTAGCTGGCTTTGGCTCTGGCCACCCCTTTGGGACTAGAGTTCTGTTGACTGGATGCTACCTTGAACTCTaGGACTCAAGTGATCCTGCT +
Preference number: 3 (lower is better)
Translates to: VAGFGSGHPFGTRVLLTGCYLEL*DSSDPA
Trigger: AGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGCA...TCCAGTCAACAGAACTCTAGTCCCAAAGGGGTGGCCAGAGCCAAAGCCAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR CAA 90 bp AAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGCAGCCTGTAATTATGTaGTTACTGATTTTCTGTCAG +
Preference number: 3 (lower is better)
Translates to: KGNPRPTRMSMIHMSAPQQPVIM*LLIFCQ
Trigger: CTGACAGAAAATCAGTAACAACATAATTACAGGCTG...CTGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR GCA 72 bp CCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATaGATACCCATACCCACTACAACCTGTATTTATTTT +
Preference number: 3 (lower is better)
Translates to: PLPSQTRSGLLV*IPIPTTTCIYF
Trigger: AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CAA 90 bp CCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCAGCCTGTAATTATGTaGTTACTGATTTTCTGTCAG +
Preference number: 3 (lower is better)
Translates to: PLSDEVGPPGMHTHTHYNQPVIM*LLIFCQ
Trigger: CTGACAGAAAATCAGTAACAACATAATTACAGGCTG...GTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR-3UTR CAA 90 bp GGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGCAGCCTGTAATTATGTaGTTACTGATTTTCTGTCAG +
Preference number: 3 (lower is better)
Translates to: GSPGLGLGWVTDSKWACGQPVIM*LLIFCQ
Trigger: CTGACAGAAAATCAGTAACAACATAATTACAGGCTG...CCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
3UTR GCA 72 bp CCCAGTCTGGCATGCAGTGGTGTGATTGTAGCTTACTaGTACCTTGAACTCTTGGACTCAAGTGATCCTGCT +
Preference number: 3 (lower is better)
Translates to: PSLACSGVIVAY*YLELLDSSDPA
Trigger: AGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGCAGTAAGCTACAATCACACCACTGCATGCCAGACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR GCA 72 bp GTCTGTGTAATTCCTTGGAGATCTCTTGGAAGGTCTTaGCTTTGGTCTCAGGAAGGAACAGGCCAGTGTAGA +
Preference number: 3 (lower is better)
Translates to: VCVIPWRSLGRS*LWSQEGTGQCR
Trigger: TCTACACTGGCCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCCAAGAGATCTCCAAGGAATTACACAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
3UTR-3UTR CAA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTTGCTACCTTGAACTCTaGGACTCAAGTGATCCTGCT +
Preference number: 3 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLCYLEL*DSSDPA
Trigger: AGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGCA...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR CAA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGCAGGGAGTCTGCAATaGCCCCGTGCCTCTTCCTAT +
Preference number: 3 (lower is better)
Translates to: SHELPQPACNYVVTDFLSAGSLQ*PRASSY
Trigger: ATAGGAAGAGGCACGGGGCAATTGCAGACTCCCTGC...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR CAA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAGCCTGTAATTATGTaGTTACTGATTTTCTGTCAG +
Preference number: 3 (lower is better)
Translates to: PRLVSNFWSQSNLPILASQPVIM*LLIFCQ
Trigger: CTGACAGAAAATCAGTAACAACATAATTACAGGCTG...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR CAA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCACAGCCTGTAATTATGTaGTTACTGATTTTCTGTCAG +
Preference number: 3 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPQPVIM*LLIFCQ
Trigger: CTGACAGAAAATCAGTAACAACATAATTACAGGCTG...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR CAA 90 bp TCCCAAAAACTTTATCTGGAGCCAAGCCAGACACAAATGTGTACATACAGTACGTGCTACCTTGAACTCTaGGACTCAAGTGATCCTGCT +
Preference number: 3 (lower is better)
Translates to: SQKLYLEPSQTQMCTYSTCYLEL*DSSDPA
Trigger: AGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGCA...CGTACTGTATGTACACATTTGTGTCTGGCTTGGCTCCAGATAAAGTTTTTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
3UTR-3UTR CAA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTCAGCCTGTAATTATGTaGTTACTGATTTTCTGTCAG +
Preference number: 3 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLQPVIM*LLIFCQ
Trigger: CTGACAGAAAATCAGTAACAACATAATTACAGGCTG...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
3UTR-3UTR CAA 90 bp ACAGACACCAAGGAAAGGGACATAGAGGAAGTGGGACAAGGCCTCCATGATAAACAGCCTGTAATTATGTaGTTACTGATTTTCTGTCAG +
Preference number: 3 (lower is better)
Translates to: TDTKERDIEEVGQGLHDKQPVIM*LLIFCQ
Trigger: CTGACAGAAAATCAGTAACAACATAATTACAGGCTG...TTTATCATGGAGGCCTTGTCCCACTTCCTCTATGTCCCTTTCCTTGGTGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
3UTR-3UTR CAA 90 bp AGATGGATAAATAAATCATGGTCTAACCACAGAGGGGAATACTACTCAGCAATAGGCAAATCTGACCAATaGAGGCAGAAAGCAGGTCAG +
Preference number: 3 (lower is better)
Translates to: RWINKSWSNHRGEYYSAIGKSDQ*RQKAGQ
Trigger: CTGACCTGCTTTCTGCCTCAATTGGTCAGATTTGCC...TATTGCTGAGTAGTATTCCCCTCTGTGGTTAGACCATGATTTATTTATCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
3UTR TCA 72 bp TGTGATTTACTGGTTTGTTATGAAGGATACAACTCATaGATAGCCAGATGGGAAAGATGCACTGGGCCTGAT +
Preference number: 3 (lower is better)
Translates to: CDLLVCYEGYNS*IARWERCTGPD
Trigger: ATCAGGCCCAGTGCATCTTTCCCATCTGGCTATTCATGAGTTGTATCCTTCATAACAAACCAGTAAATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
3UTR CCA 72 bp CGTGCAACAACATTCATGAATCCCAAAAACTTTATCTaGAGCCAAGCCAGACACAAATGTGTACATACAGTA +
Preference number: 3 (lower is better)
Translates to: RATTFMNPKNFI*SQARHKCVHTV
Trigger: TACTGTATGTACACATTTGTGTCTGGCTTGGCTCCAGATAAAGTTTTTGGGATTCATGAATGTTGTTGCACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
3UTR GCA 72 bp ACTACTCAGCAATACAAAGGAGTCTCTCCTAATACGTaGAACAACATTCATGAATCCCAAAAACTTTATCTG +
Preference number: 3 (lower is better)
Translates to: TTQQYKGVSPNT*NNIHESQKLYL
Trigger: CAGATAAAGTTTTTGGGATTCATGAATGTTGTTGCACGTATTAGGAGAGACTCCTTTGTATTGCTGAGTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR GCA 90 bp CCCCGGAGCCGCCGTAGTGCTGAGTCCGACCACCTGTCCCATCACGATCCCCAGGCGCCCCGCAGACCATaGAGGCAGCAGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PRSRRSAESDHLSHHDPQAPRRP*RQQAWP
Trigger: TGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGC...CTGGGGATCGTGATGGGACAGGTGGTCGGACTCAGCACTACGGCGGCTCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR TCA 90 bp GCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGGGCTGTACCCACCGATaGGCAGCACGCGCCGACCCA +
Preference number: 4 (lower is better)
Translates to: ATAPRSSLGALSPRYMGWGCTHR*AARADP
Trigger: TGGGTCGGCGCGTGCTGCTCATCGGTGGGTACAGCC...CCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR TCA 90 bp GCTGAGCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGGCCATTAGCAAGCGGTaGGCCGGCAGCCTGTGCGCG +
Preference number: 4 (lower is better)
Translates to: AELMATAPRSSLGALSPRAISKR*AGSLCA
Trigger: CGCGCACAGGCTGCCGGCTCACCGCTTGCTAATGGC...CCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436643.5
ENST00000627257.2
CDS-3UTR GCA 90 bp CTGGTCAAACAGCTCTGTGGCCAGGATCCCCGTCACTCCGGCAGGGCCAATGCCGCGCCCCGCAGACCATaGAGGCAGCAGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LVKQLCGQDPRHSGRANAAPRRP*RQQAWP
Trigger: TGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGC...GGCATTGGCCCTGCCGGAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp CTGTCTCCTCAGGGCCCGATGCTGGAACAGCTCCCATGGGCGCCGGGCACGGCACTGTTCTTTGCTCCCTaGCCTGAGTCCGACCACCTG +
Preference number: 4 (lower is better)
Translates to: LSPQGPMLEQLPWAPGTALFFAP*PESDHL
Trigger: CAGGTGGTCGGACTCAGGTCAGGGAGCAAAGAACAG...TGCCGTGCCCGGCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp GATCCACATGAGCGCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTGGTCCTCCTCAGGGCCCGATaGTGGAACAGCTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: DPHERPADHAGSRPGHLVLLRAR*WNSSHG
Trigger: CCCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAG...GACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGCTCATGTGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp GATCCACATGAGCGCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTGGTCCGCTTCCGGCACTCCTaGCTTCCGGAACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: DPHERPADHAGSRPGHLVRFRHS*LPEHGG
Trigger: TCCTCCGTGTTCCGGAAGGCAGGAGTGCCGGAAGCG...GACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGCTCATGTGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp GCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATCCTGAGCGGAGGTCTTaGTGTCCCAGGGAGACCCCG +
Preference number: 4 (lower is better)
Translates to: AHGHSSSELLRGALPQVHPERRS*CPRETP
Trigger: CGGGGTCTCCCTGGGACAGCAAGACCTCCGCTCAGG...ATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000436643.5
ENST00000627257.2
CDS-3UTR GCA 90 bp CCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCCCTGCGCGATTCCCTaGGCCGGTCGCCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: PLSDEVGPPGMHTHTHYNPCAIP*AGRHCR
Trigger: CCGGCAGTGGCGACCGGCGCAGGGAATCGCGCAGGG...GTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp CGGAGGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCTCAGGGCCCGATGCTaGAACAGCTCCCATGGGCGC +
Preference number: 4 (lower is better)
Translates to: RRRRRRTPSHSRRAPWHCLRARC*NSSHGR
Trigger: GCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAG...GCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCTCCTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp CCCCGGAGCCGCCGTAGTGCTGAGTCCGACCACCTGTCCCATCACGATCCCCAGGCAGGCCTGGCCATCTaGTCAAACAGCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PRSRRSAESDHLSHHDPQAGLAI*SNSSVA
Trigger: GGCCACAGAGCTGTTTGACCAGATGGCCAGGCCTGC...CTGGGGATCGTGATGGGACAGGTGGTCGGACTCAGCACTACGGCGGCTCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR CCA 90 bp CCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTGGAGGCCACTGCCCCTaGGCGTTCTCCGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PLPSQTRSGLLVCIPIPTGGHCP*AFSGGP
Trigger: TGGCCCTCCGGAGAACGCCCAGGGGCAGTGGCCTCC...AGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR TCA 90 bp CTGTCTCCTCAGGGCCCGATGCTGGAACAGCTCCCATGGGCGCCGGGCACGGCAATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LSPQGPMLEQLPWAPGTAISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...TGCCGTGCCCGGCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp GCTGAGCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: AELMATAPRSSLGALSPRSRKDG*AHGHSS
Trigger: GGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCT...CCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp CTGTCTCCTCAGGGCCCGATGCTGGAACAGCTCCCATGGGCGCCGGGCACGGCATGTCTCCACAGTCAATaGGGAGGTAGCGCGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LSPQGPMLEQLPWAPGTACLHSQ*GGSAGF
Trigger: AAAGCCCGCGCTACCTCCTCATTGACTGTGGAGACA...TGCCGTGCCCGGCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp GGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGCAGGGGAAGGAGCTCTaGAGGCACAGGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: GGVGVHRVIPAELHGTAQQGKEL*RHRATV
Trigger: CACTGTGGCCCTGTGCCTGCAGAGCTCCTTCCCCTG...CTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp AGTCCCGATGATCGCGTACTGGATCTTCGCTTCCGGCACTCCTGCCTTCCGGAAGCGCCCCGCAGACCATaGAGGCAGCAGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SPDDRVLDLRFRHSCLPEAPRRP*RQQAWP
Trigger: TGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGC...TTCCGGAAGGCAGGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp CGGAGGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGGTGGCTGCACCTaGGCAGTTCACTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: RRRRRRTPSHSRRAPWHCPGGCT*AVHSGP
Trigger: CGGACCTGAGTGAACTGCGCAGGTGCAGCCACCTGG...GCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCTCCTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp GATCCACATGAGCGCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTGGTCAGCCTCCCAGGTGGCTaGACCTGCGCAGTTCACTCA +
Preference number: 4 (lower is better)
Translates to: DPHERPADHAGSRPGHLVSLPGG*TCAVHS
Trigger: TGAGTGAACTGCGCAGGTGCAGCCACCTGGGAGGCT...GACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGCTCATGTGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCTGCGCCGGTCGCCACTaGCGGCCGCCAGAACCTCGG +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTCAGRH*RPPEPR
Trigger: CCGAGGTTCTGGCGGCCGGCAGTGGCGACCGGCGCA...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR GCA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGTGCGCCGGTCGCCACTaGCGGCCGCCAGAACCTCGG +
Preference number: 4 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGCAGRH*RPPEPR
Trigger: CCGAGGTTCTGGCGGCCGGCAGTGGCGACCGGCGCA...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR GCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCCCTGCGCGATTCCCTaGGCCGGTCGCCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTPCAIP*AGRHCR
Trigger: CCGGCAGTGGCGACCGGCGCAGGGAATCGCGCAGGG...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp CCCCGGAGCCGCCGTAGTGCTGAGTCCGACCACCTGTCCCATCACGATCCCCAGAGATGGCTGAGCTCATaGCCACAGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PRSRRSAESDHLSHHDPQRWLSS*PQLLGA
Trigger: AGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCT...CTGGGGATCGTGATGGGACAGGTGGTCGGACTCAGCACTACGGCGGCTCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR CCA 90 bp CAGCTCCCAGTCCCGATGATCGCGTACTGGATCTTCGCTTCCGGCACTCCTGCCCTCAGGGCCCGATGCTaGAACAGCTCCCATGGGCGC +
Preference number: 4 (lower is better)
Translates to: QLPVPMIAYWIFASGTPALRARC*NSSHGR
Trigger: GCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAG...GGCAGGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGGGACTGGGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp GCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGGGTCAAACAGCTCTGTaGCCAGGATCCCCGTCACTC +
Preference number: 4 (lower is better)
Translates to: ATAPRSSLGALSPRYMGWGQTAL*PGSPSL
Trigger: GAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACC...CCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR CCA 90 bp GATCCACATGAGCGCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTGGTCGCAGGCCTGGCCATCTaGTCAAACAGCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: DPHERPADHAGSRPGHLVAGLAI*SNSSVA
Trigger: GGCCACAGAGCTGTTTGACCAGATGGCCAGGCCTGC...GACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGCTCATGTGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp GCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGGACAGTAGCTGGCTTTaGCTCTGGCCACCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: ATAPRSSLGALSPRYMGWDSSWL*LWPPLW
Trigger: CCAAAGGGGTGGCCAGAGCCAAAGCCAGCTACTGTC...CCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR TCA 90 bp GCTGAGCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTGCTCACACCTGCATTaGCTCCCACGAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: AELMATAPRSSLGALSPRCSHLH*LPRAVF
Trigger: GAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCA...CCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp AAAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGGCTGTACCCACCGATaGGCAGCACGCGCCGACCCA +
Preference number: 4 (lower is better)
Translates to: KGKSQADQDEHDPHERPAGCTHR*AARADP
Trigger: TGGGTCGGCGCGTGCTGCTCATCGGTGGGTACAGCC...TGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp ACAACTAACAACCGCCGTGAGCAGCTCGCAGCTCCCAGTCCCGATGATCGCGTAGGCTGTACCCACCGATaGGCAGCACGCGCCGACCCA +
Preference number: 4 (lower is better)
Translates to: TTNNRREQLAAPSPDDRVGCTHR*AARADP
Trigger: TGGGTCGGCGCGTGCTGCTCATCGGTGGGTACAGCC...TACGCGATCATCGGGACTGGGAGCTGCGAGCTGCTCACGGCGGTTGTTAGTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp GCAGAGCTCCATGGCACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCACAGGGCCACAGTaGAGATGCTCCCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AELHGTAQNHEACHLSPQGTGPQ*RCSPSR
Trigger: CCTGCTGGGGGAGCATCTTCACTGTGGCCCTGTGCC...CTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp GGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGTTCGAAAGAGGGGCCTaGGCGGAGGTCTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GGVGVHRVIPAELHGTAQFERGA*AEVLLS
Trigger: GGACAGCAAGACCTCCGCTCAGGCCCCTCTTTCGAA...CTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp CACATGAGCGCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTGGTCAAACCTTTGCTCCCTGACCTaGGTCCGACCACCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: HMSAPQTMQAAGLAIWSNLCSLT*VRPPVP
Trigger: TGGGACAGGTGGTCGGACTCAGGTCAGGGAGCAAAG...GTTTGACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGCTCATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp GCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATAGAGGCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: AHGHSSSELLRGALPQVHRGFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGCCTCT...ATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436643.5
ENST00000627257.2
CDS-3UTR GCA 90 bp CCCCGGAGCCGCCGTAGTGCTGAGTCCGACCACCTGTCCCATCACGATCCCCAGGAAAAGTCCCACCAATaGCGGCAGCGCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: PRSRRSAESDHLSHHDPQEKSHQ*RQRRWS
Trigger: TGACCATCTGCGCTGCCGGCATTGGTGGGACTTTTC...CTGGGGATCGTGATGGGACAGGTGGTCGGACTCAGCACTACGGCGGCTCCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR GCA 90 bp CCCCGGAGCCGCCGTAGTGCTGAGTCCGACCACCTGTCCCATCACGATCCCCAGGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PRSRRSAESDHLSHHDPQDGQGT*KQCSKE
Trigger: CTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATC...CTGGGGATCGTGATGGGACAGGTGGTCGGACTCAGCACTACGGCGGCTCCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR GCA 90 bp GCTGAGCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: AELMATAPRSSLGALSPRDGQGT*KQCSKE
Trigger: CTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATC...CCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp CTGCCTTCCGGAACACGGAGGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGACTCCTCAGGGCCCGATaGTGGAACAGCTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: LPSGTRRRRRRTPSHSRRLLRAR*WNSSHG
Trigger: CCCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAG...TCTGCGGGAATGACTCGGTGTACGCCTACGCCTCCTCCGTGTTCCGGAAGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp GGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAACCACGAGCGCTTCCGGCACTCCTaGCTTCCGGAACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: GVHRVIPAELHGTAQNHERFRHS*LPEHGG
Trigger: TCCTCCGTGTTCCGGAAGGCAGGAGTGCCGGAAGCG...CTCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp CCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAACAGCTCCTGAGCGGAGGTCTTaGTGTCCCAGGGAGACCCCG +
Preference number: 4 (lower is better)
Translates to: PEPRGLSPVSSGPDAGTAPERRS*CPRETP
Trigger: CGGGGTCTCCCTGGGACAGCAAGACCTCCGCTCAGG...AGCTGTTCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp ACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACCCTCAGCCGCAACCCTaGGCGATTCCCTGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: TPLSDEVGPPGMHTHTHYPQPQP*AIPCAG
Trigger: ACCGGCGCAGGGAATCGCGCAGGGTTGCGGCTGAGG...GTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp CACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGATGCCGGCAGCGCAGATaGTCAGGAGCAGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: HCPEPRGLSPVSSGPDAGCRQRR*SGAGSC
Trigger: GCAGGATCCTGCTCCTGACCATCTGCGCTGCCGGCA...TCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp CCATGGCACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATTGCCGGCAGCGCAGATaGTCAGGAGCAGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: PWHCPEPRGLSPVSSGPDCRQRR*SGAGSC
Trigger: GCAGGATCCTGCTCCTGACCATCTGCGCTGCCGGCA...ATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTGCCATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp GATCCACATGAGCGCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTGGTCAGATGGCTGAGCTCATaGCCACAGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: DPHERPADHAGSRPGHLVRWLSS*PQLLGA
Trigger: AGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCT...GACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGCTCATGTGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGGAGGCCACTGCCCCTaGGCGTTCTCCGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGGGHCP*AFSGGP
Trigger: TGGCCCTCCGGAGAACGCCCAGGGGCAGTGGCCTCC...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR TCA 90 bp GCTGAGCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: AELMATAPRSSLGALSPRAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...CCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp GCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ATAPRSSLGALSPRYMGWAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...CCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp GCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: AHGHSSSELLRGALPQVHSRKDG*AHGHSS
Trigger: GGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCT...ATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp GGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAGCTCCCAGTCCCGATaGTCGCGTACTGGATCTTCG +
Preference number: 4 (lower is better)
Translates to: GGVGVHRVIPAELHGTAQSSQSR*SRTGSS
Trigger: CGAAGATCCAGTACGCGATCATCGGGACTGGGAGCT...CTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCGGCTGTACCCACCGATaGGCAGCACGCGCCGACCCA +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTGCTHR*AARADP
Trigger: TGGGTCGGCGCGTGCTGCTCATCGGTGGGTACAGCC...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR TCA 90 bp AGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTCACAGGCACAGGGCCACAGTaGAGATGCTCCCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSLGALSPRYMGWMFMLTGTGPQ*RCSPSR
Trigger: CCTGCTGGGGGAGCATCTTCACTGTGGCCCTGTGCC...TGTGAGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR TCA 90 bp ACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACGGCACAGGGCCACAGTaGAGATGCTCCCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TPLSDEVGPPGMHTHTHYGTGPQ*RCSPSR
Trigger: CCTGCTGGGGGAGCATCTTCACTGTGGCCCTGTGCC...GTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR TCA 90 bp CCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTGCTCCAAAGAGGCCTCCCAGGTCTTCCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: PSVMAKGPASSAPKRPPRSSFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAAGA...CCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR TCA 90 bp TGTCCCATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTGCCATTAGCAAGCGGTaGGCCGGCAGCCTGTGCGCG +
Preference number: 4 (lower is better)
Translates to: CPITIPRAVKMAELMATAAISKR*AGSLCA
Trigger: CGCGCACAGGCTGCCGGCTCACCGCTTGCTAATGGC...AGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGATGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436643.5
ENST00000627257.2
CDS-3UTR GCA 90 bp CTGCCTTCCGGAACACGGAGGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LPSGTRRRRRRTPSHSRRGTCKQ*SKEASQ
Trigger: CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCC...TCTGCGGGAATGACTCGGTGTACGCCTACGCCTCCTCCGTGTTCCGGAAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp AGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAACTCCTCAGGGCCCGATaGTGGAACAGCTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: RRRRTPSHSRRAPWHCPELLRAR*WNSSHG
Trigger: CCCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAG...TTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp CTGCAGGCACAGGGCCACAGTGAAGATGCTCCCCCAGCAGGTCATCAGGCTGTACGCTTCCGGCACTCCTaGCTTCCGGAACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: LQAQGHSEDAPPAGHQAVRFRHS*LPEHGG
Trigger: TCCTCCGTGTTCCGGAAGGCAGGAGTGCCGGAAGCG...TACAGCCTGATGACCTGCTGGGGGAGCATCTTCACTGTGGCCCTGTGCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp CCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAACAGCTCAGGGGAAGGAGCTCTaGAGGCACAGGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: PEPRGLSPVSSGPDAGTAQGKEL*RHRATV
Trigger: CACTGTGGCCCTGTGCCTGCAGAGCTCCTTCCCCTG...AGCTGTTCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp ACAACTAACAACCGCCGTGAGCAGCTCGCAGCTCCCAGTCCCGATGATCGCGTACCTGAGCGGAGGTCTTaGTGTCCCAGGGAGACCCCG +
Preference number: 4 (lower is better)
Translates to: TTNNRREQLAAPSPDDRVPERRS*CPRETP
Trigger: CGGGGTCTCCCTGGGACAGCAAGACCTCCGCTCAGG...TACGCGATCATCGGGACTGGGAGCTGCGAGCTGCTCACGGCGGTTGTTAGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp ATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGCCTGAGCGGAGGTCTTaGTGTCCCAGGGAGACCCCG +
Preference number: 4 (lower is better)
Translates to: ITIPRAVKMAELMATAPRPERRS*CPRETP
Trigger: CGGGGTCTCCCTGGGACAGCAAGACCTCCGCTCAGG...CCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436643.5
ENST00000627257.2
CDS-3UTR GCA 90 bp AAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGCCAGGTGGCTGCACCTaGGCAGTTCACTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: KGNPRPTRMSMIHMSAPQPGGCT*AVHSGP
Trigger: CGGACCTGAGTGAACTGCGCAGGTGCAGCCACCTGG...CTGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp CACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAACCACCCTGCTCTCCTaGCCACCTACACACCTCCCT +
Preference number: 4 (lower is better)
Translates to: HCPEPRGLSPVSSGPDAGTTLLS*PPTHLP
Trigger: AGGGAGGTGTGTAGGTGGGCAGGAGAGCAGGGTGGT...TCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp CCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCAACCTCGGAGGCCACTaGCCCTGGGCGTTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: PSQTRSGLLVCIPIPTTTNLGGH*PWAFSG
Trigger: TCCGGAGAACGCCCAGGGGCAGTGGCCTCCGAGGTT...GGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp CAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTCTCAGGGCCCGATGCTaGAACAGCTCCCATGGGCGC +
Preference number: 4 (lower is better)
Translates to: QLRQKAGQWFPRSGTGVGLRARC*NSSHGR
Trigger: GCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAG...ACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp AGTGAAGATGCTCCCCCAGCAGGTCATCAGGCTGTACCCACCGATGAGCAGCACCTCAGGGCCCGATGCTaGAACAGCTCCCATGGGCGC +
Preference number: 4 (lower is better)
Translates to: SEDAPPAGHQAVPTDEQHLRARC*NSSHGR
Trigger: GCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAG...GTGCTGCTCATCGGTGGGTACAGCCTGATGACCTGCTGGGGGAGCATCTTCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp GAGCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACCAAAGATGCAGGCCATaGCCAGGTAGAGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ELMATAPRSSLGALSPRYQRCRP*PGRVSR
Trigger: CCTGGACACTCTACCTGGCCATGGCCTGCATCTTTG...GTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR TCA 90 bp GCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGTCATTGGTGAATTCCTaGATGTGCAAGGTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: ATAPRSSLGALSPRYMGWSLVNS*MCKVGA
Trigger: TGCCCCGACCTTGCACATTCAGGAATTCACCAATGA...CCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp AGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTGACTTCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: SSSELLRGALPQVHGLDVDFFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGAAGTC...AACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000625546.2
ENST00000630215.2
CDS-3UTR TCA 90 bp GCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATTGCTCACACCTGCATTaGCTCCCACGAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: AHGHSSSELLRGALPQVHCSHLH*LPRAVF
Trigger: GAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCA...ATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp GGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGACCAGCTCCCAGTCCCGATaGTCGCGTACTGGATCTTCG +
Preference number: 4 (lower is better)
Translates to: GNPRPTRMSMIHMSAPQTSSQSR*SRTGSS
Trigger: CGAAGATCCAGTACGCGATCATCGGGACTGGGAGCT...GGTCTGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp ACCTGTCCCATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGGCACAGGGCCACAGTaGAGATGCTCCCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TCPITIPRAVKMAELMATGTGPQ*RCSPSR
Trigger: CCTGCTGGGGGAGCATCTTCACTGTGGCCCTGTGCC...TGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGATGGGACAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR TCA 90 bp CAGCTCCCAGTCCCGATGATCGCGTACTGGATCTTCGCTTCCGGCACTCCTGCCGCTGCCTCAGCCTCCTaGGTAGCTAGAGCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: QLPVPMIAYWIFASGTPAAASAS*VARAVS
Trigger: GCTAACAGCTCTAGCTACTCAGGAGGCTGAGGCAGC...GGCAGGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGGGACTGGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp AACCGCCGTGAGCAGCTCGCAGCTCCCAGTCCCGATGATCGCGTACTGGATCTTCTTTGCTCCCTGACCTaGGTCCGACCACCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: NRREQLAAPSPDDRVLDLLCSLT*VRPPVP
Trigger: TGGGACAGGTGGTCGGACTCAGGTCAGGGAGCAAAG...AAGATCCAGTACGCGATCATCGGGACTGGGAGCTGCGAGCTGCTCACGGCGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp CACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAACAGCTCCCATGGCTGTTCTTTGCTCCCTaGCCTGAGTCCGACCACCTG +
Preference number: 4 (lower is better)
Translates to: HEACHLSPQGPMLEQLPWLFFAP*PESDHL
Trigger: CAGGTGGTCGGACTCAGGTCAGGGAGCAAAGAACAG...CCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp CCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACTGTCTCTCGCTGGTCTaGCCTCAGCCGCAACCCTGC +
Preference number: 4 (lower is better)
Translates to: PLSDEVGPPGMHTHTHYNCLSLV*PQPQPC
Trigger: GCAGGGTTGCGGCTGAGGTCAGACCAGCGAGAGACA...GTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR GCA 90 bp GGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGGAAAAGTCCCACCAATaGCGGCAGCGCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: GGVGVHRVIPAELHGTAQEKSHQ*RQRRWS
Trigger: TGACCATCTGCGCTGCCGGCATTGGTGGGACTTTTC...CTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp GCGCCGACCCACCCTCTCGATTACCACACAACTAACAACCGCCGTGAGCAGCTCGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: APTHPLDYHTTNNRREQLGTCKQ*SKEASQ
Trigger: CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCC...GAGCTGCTCACGGCGGTTGTTAGTTGTGTGGTAATCGAGAGGGTGGGTCGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp ACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGAGCGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TIPRAVKMAELMATAPRSGTCKQ*SKEASQ
Trigger: CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCC...GCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp CCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTGCTCCAAAGAGGCCTCCCAGGGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PSVMAKGPASSAPKRPPRDGQGT*KQCSKE
Trigger: CTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATC...CCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR GCA 90 bp CTGTCTCCTCAGGGCCCGATGCTGGAACAGCTCCCATGGGCGCCGGGCACGGCACATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: LSPQGPMLEQLPWAPGTAHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...TGCCGTGCCCGGCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp AAAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCACTCCTCAGGGCCCGATaGTGGAACAGCTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: KGKSQADQDEHDPHERPALLRAR*WNSSHG
Trigger: CCCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAG...TGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp ACAACTAACAACCGCCGTGAGCAGCTCGCAGCTCCCAGTCCCGATGATCGCGTACGCTTCCGGCACTCCTaGCTTCCGGAACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: TTNNRREQLAAPSPDDRVRFRHS*LPEHGG
Trigger: TCCTCCGTGTTCCGGAAGGCAGGAGTGCCGGAAGCG...TACGCGATCATCGGGACTGGGAGCTGCGAGCTGCTCACGGCGGTTGTTAGTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTGCGCCCCGCAGACCATaGAGGCAGCAGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAAPRRP*RQQAWP
Trigger: TGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGC...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp GGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATCGCCAGGGGATCCATTaGGTGAGAGGCAGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: GRKQVSGSPGLGLGWVTDRQGIH*VRGRSD
Trigger: GTCGGACCTGCCTCTCACGCAATGGATCCCCTGGCG...ATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR GCA 90 bp CTGGTCAAACAGCTCTGTGGCCAGGATCCCCGTCACTCCGGCAGGGCCAATGCCCAGGGAGTCTGCAATTaGCCCGTGCCTCTTCCTATC +
Preference number: 4 (lower is better)
Translates to: LVKQLCGQDPRHSGRANAQGVCN*PVPLPI
Trigger: GATAGGAAGAGGCACGGGGCAATTGCAGACTCCCTG...GGCATTGGCCCTGCCGGAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp CCATGGCACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATTCCCTGCAGGGAGTCTaGAATTGCCCCGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: PWHCPEPRGLSPVSSGPDSLQGV*NCPVPL
Trigger: AAGAGGCACGGGGCAATTGCAGACTCCCTGCAGGGA...ATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp GGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGACCTCCCTGCAGGGAGTCTaGAATTGCCCCGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GNPRPTRMSMIHMSAPQTSLQGV*NCPVPL
Trigger: AAGAGGCACGGGGCAATTGCAGACTCCCTGCAGGGA...GGTCTGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp GAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTCACCATGTGGGGGAGGGGTaGTTACCTGAGTCCGACCAC +
Preference number: 4 (lower is better)
Translates to: ELLRGALPQVHGLDVHAHHVGEG*LPESDH
Trigger: GTGGTCGGACTCAGGTAAGCACCCCTCCCCCACATG...GTGAGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR GCA 90 bp TCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTGCTCCAAAGAGGCCTCCCAGGCCAGATGGGAAAGATaGACTGGGCCTGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: SQRDGQGTCKQCSKEASQARWER*TGPDPG
Trigger: CCCAGGATCAGGCCCAGTGCATCTTTCCCATCTGGC...CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR GCA 90 bp CCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTAACCTCGGAGGCCACTaGCCCTGGGCGTTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: PLRRGRASWYAYPYPLQPNLGGH*PWAFSG
Trigger: TCCGGAGAACGCCCAGGGGCAGTGGCCTCCGAGGTT...AGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp GGCAAAGATGCAGGCCATGGCCAGGTAGAGTGTCCAGGGGAAGGAGCTCTGCAGTCCCGCAGAGCTCCATaGCACTGCCCAGAACCACGA +
Preference number: 4 (lower is better)
Translates to: GKDAGHGQVECPGEGALQSRRAP*HCPEPR
Trigger: TCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGA...CTGCAGAGCTCCTTCCCCTGGACACTCTACCTGGCCATGGCCTGCATCTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp CTGGTCAAACAGCTCTGTGGCCAGGATCCCCGTCACTCCGGCAGGGCCAATGCCCCGATGATCGCGTACTaGATCTTCGCTTCCGGCACT +
Preference number: 4 (lower is better)
Translates to: LVKQLCGQDPRHSGRANAPMIAY*IFASGT
Trigger: AGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGG...GGCATTGGCCCTGCCGGAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp CGGAGGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCGATGATCGCGTACTaGATCTTCGCTTCCGGCACT +
Preference number: 4 (lower is better)
Translates to: RRRRRRTPSHSRRAPWHCPMIAY*IFASGT
Trigger: AGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGG...GCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCTCCTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp AGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTGGTCAAACAGCTCTGTaGCCAGGATCCCCGTCACTC +
Preference number: 4 (lower is better)
Translates to: SSSELLRGALPQVHGLDVGQTAL*PGSPSL
Trigger: GAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACC...AACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR CCA 90 bp CCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTGCAGGCCTGGCCATCTaGTCAAACAGCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PLPSQTRSGLLVCIPIPTAGLAI*SNSSVA
Trigger: GGCCACAGAGCTGTTTGACCAGATGGCCAGGCCTGC...AGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp CTGCCTTCCGGAACACGGAGGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGATGCAGGCAGCAGGCCTaGCCATCTGGTCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: LPSGTRRRRRRTPSHSRRCRQQA*PSGQTA
Trigger: AGCTGTTTGACCAGATGGCCAGGCCTGCTGCCTGCA...TCTGCGGGAATGACTCGGTGTACGCCTACGCCTCCTCCGTGTTCCGGAAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp CTCGCAGCTCCCAGTCCCGATGATCGCGTACTGGATCTTCGCTTCCGGCACTCCTGCAGGCAGCAGGCCTaGCCATCTGGTCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: LAAPSPDDRVLDLRFRHSCRQQA*PSGQTA
Trigger: AGCTGTTTGACCAGATGGCCAGGCCTGCTGCCTGCA...GGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGGGACTGGGAGCTGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp GCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGTGCAGGCAGCAGGCCTaGCCATCTGGTCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: AVKMAELMATAPRSSLGACRQQA*PSGQTA
Trigger: AGCTGTTTGACCAGATGGCCAGGCCTGCTGCCTGCA...CGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR CCA 90 bp CTGGTCAAACAGCTCTGTGGCCAGGATCCCCGTCACTCCGGCAGGGCCAATGCCACAGGCCAGTGTAGATaGCCCCACAGACACAGACAC +
Preference number: 4 (lower is better)
Translates to: LVKQLCGQDPRHSGRANATGQCR*PHRHRH
Trigger: GTGTCTGTGTCTGTGGGGCCATCTACACTGGCCTGT...GGCATTGGCCCTGCCGGAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp CAGCTCCCAGTCCCGATGATCGCGTACTGGATCTTCGCTTCCGGCACTCCTGCCGACAGTAGCTGGCTTTaGCTCTGGCCACCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: QLPVPMIAYWIFASGTPADSSWL*LWPPLW
Trigger: CCAAAGGGGTGGCCAGAGCCAAAGCCAGCTACTGTC...GGCAGGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGGGACTGGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp AAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGGATCGCAGGAGGGCGTaGAGCATTCGAAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: KGNPRPTRMSMIHMSAPQDRRRA*SIRKRG
Trigger: GCCCCTCTTTCGAATGCTCCACGCCCTCCTGCGATC...CTGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CCA 90 bp CCATGGCACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGTTAAGCCTCCCAGGTaGCTGCACCTGCGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PWHCPEPRGLSPVSSGPDVKPPR*LHLRSS
Trigger: TGAACTGCGCAGGTGCAGCCACCTGGGAGGCTTAAC...ATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTGCCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTGGGGCGGGGGTGAGGTaGAAGTCAGCCCGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCIGAGVR*KSARPG
Trigger: TCCAGGCCGGGCTGACTTCCACCTCACCCCCGCCCC...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp ACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACGCCGGAAGGGAGCTCTaGTCCAAGGTCATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TPLSDEVGPPGMHTHTHYAGREL*SKVISA
Trigger: GGCCGAGATGACCTTGGACCAGAGCTCCCTTCCGGC...GTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR TCA 90 bp CACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: HCPEPRGLSPVSSGPDAGISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...TCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp CTGCCTTCCGGAACACGGAGGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LPSGTRRRRRRTPSHSRRISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...TCTGCGGGAATGACTCGGTGTACGCCTACGCCTCCTCCGTGTTCCGGAAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp GGCAAAGATGCAGGCCATGGCCAGGTAGAGTGTCCAGGGGAAGGAGCTCTGCAGGACTTCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: GKDAGHGQVECPGEGALQDFFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGAAGTC...CTGCAGAGCTCCTTCCCCTGGACACTCTACCTGGCCATGGCCTGCATCTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR TCA 90 bp GGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: GGVGVHRVIPAELHGTAQSLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...CTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp GCCACAGTGAAGATGCTCCCCCAGCAGGTCATCAGGCTGTACCCACCGATGAGCAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: ATVKMLPQQVIRLYPPMSSRKDG*AHGHSS
Trigger: GGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCT...GCTCATCGGTGGGTACAGCCTGATGACCTGCTGGGGGAGCATCTTCACTGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp CTGCAGGCACAGGGCCACAGTGAAGATGCTCCCCCAGCAGGTCATCAGGCTGTAAGCTCCCAGTCCCGATaGTCGCGTACTGGATCTTCG +
Preference number: 4 (lower is better)
Translates to: LQAQGHSEDAPPAGHQAVSSQSR*SRTGSS
Trigger: CGAAGATCCAGTACGCGATCATCGGGACTGGGAGCT...TACAGCCTGATGACCTGCTGGGGGAGCATCTTCACTGTGGCCCTGTGCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCGGCTGTACCCACCGATaGGCAGCACGCGCCGACCCA +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASGCTHR*AARADP
Trigger: TGGGTCGGCGCGTGCTGCTCATCGGTGGGTACAGCC...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp GCCTCCATGATAAAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGGGCTGTACCCACCGATaGGCAGCACGCGCCGACCCA +
Preference number: 4 (lower is better)
Translates to: ASMIKGNPRPTRMSMIHMGCTHR*AARADP
Trigger: TGGGTCGGCGCGTGCTGCTCATCGGTGGGTACAGCC...CATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTTTATCATGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp GCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCCCGCCTGGGGAAGTTaGGTCTGTGTAATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: AVKMAELMATAPRSSLGAPAWGS*VCVIPW
Trigger: CCAAGGAATTACACAGACTCAACTTCCCCAGGCGGG...CGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR TCA 90 bp CCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAACAGCTTCTTCCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: PEPRGLSPVSSGPDAGTASSFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAAGA...AGCTGTTCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp CGGAGGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCTACCACGCTCACCATTaGTTGCTAAGCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RRRRRRTPSHSRRAPWHCYHAHH*LLSTWS
Trigger: GCTCCAGGTGCTTAGCAATCAATGGTGAGCGTGGTA...GCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCTCCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp CTCGCAGCTCCCAGTCCCGATGATCGCGTACTGGATCTTCGCTTCCGGCACTCCACTCTTGGACTCAAGTaGTCCTGCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LAAPSPDDRVLDLRFRHSTLGLK*SCCLSL
Trigger: GAGGCTGAGGCAGCAGGATCACTTGAGTCCAAGAGT...GGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGGGACTGGGAGCTGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp AGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAACCGCAATCCCTCATCTaGAACGCCTGGTCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: RRRRTPSHSRRAPWHCPEPQSLI*NAWSGQ
Trigger: TTGCCCAGACCAGGCGTTTCAGATGAGGGATTGCGG...TTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp GCTTACCTGAGTCCGACCACCTGTCCCATCACGATCCCCAGAGCCGTAAAGATGGGAGGGGTGCTTACCTaGGTCCGACCACCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: AYLSPTTCPITIPRAVKMGGVLT*VRPPVP
Trigger: TGGGACAGGTGGTCGGACTCAGGTAAGCACCCCTCC...CATCTTTACGGCTCTGGGGATCGTGATGGGACAGGTGGTCGGACTCAGGTAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR TCA 90 bp TCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTGCTCCAAAGAGGCCTCCCAGAAGATGCACTGGGCCTaGTCCTGGGAGAGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: SQRDGQGTCKQCSKEASQKMHWA*SWESRL
Trigger: CAACCTACTCTCCCAGGATCAGGCCCAGTGCATCTT...CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR GCA 90 bp GAGCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACTCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: ELMATAPRSSLGALSPRYSPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...GTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp GGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GSPGLGLGWVTDSKWACGGTCKQ*SKEASQ
Trigger: CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCC...CCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp TTCCTTCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTGCTCCAAAGAGGCCTGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: FLPSVMAKGPASSAPKRPGTCKQ*SKEASQ
Trigger: CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCC...AGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR GCA 90 bp AGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTCACAGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSLGALSPRYMGWMFMLTGTCKQ*SKEASQ
Trigger: CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCC...TGTGAGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp TCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTGCTCCAAAGAGGCCTCCCAGGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: SQRDGQGTCKQCSKEASQDGQGT*KQCSKE
Trigger: CTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATC...CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR GCA 90 bp GTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTCTCCTCAGGGCCCGATaGTGGAACAGCTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: VPQVWDWGGLLIANGHVGLLRAR*WNSSHG
Trigger: CCCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAG...ACCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp CCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTAGAGCTCCATGGCACTaGCCAGAACCACGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: PLPSQTRSGLLVCIPIPTRAPWH*PEPRGL
Trigger: CAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCT...AGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp CCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAACAGCTAGAGCTCCATGGCACTaGCCAGAACCACGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: PEPRGLSPVSSGPDAGTARAPWH*PEPRGL
Trigger: CAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCT...AGCTGTTCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp GCAGAGCTCCATGGCACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGAGAGCTCCATGGCACTaGCCAGAACCACGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: AELHGTAQNHEACHLSPQRAPWH*PEPRGL
Trigger: CAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCT...CTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCGCTTCCGGCACTCCTaGCTTCCGGAACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTRFRHS*LPEHGG
Trigger: TCCTCCGTGTTCCGGAAGGCAGGAGTGCCGGAAGCG...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp GTAGTGCTGAGTCCGACCACCTGTCCCATCACGATCCCCAGAGCCGTAAAGATGCAGGGGAAGGAGCTCTaGAGGCACAGGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: VVLSPTTCPITIPRAVKMQGKEL*RHRATV
Trigger: CACTGTGGCCCTGTGCCTGCAGAGCTCCTTCCCCTG...CATCTTTACGGCTCTGGGGATCGTGATGGGACAGGTGGTCGGACTCAGCACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR GCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCGAACCGGTCTCGGGTTaGCGCCAGGGGATCCATTGC +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTEPVSG*RQGIHC
Trigger: GCAATGGATCCCCTGGCGGCAACCCGAGACCGGTTC...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR GCA 90 bp GATCCACATGAGCGCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTGGTCACCTGGAGCCATGTCTaGACACAAAGGGTGCTCAAT +
Preference number: 4 (lower is better)
Translates to: DPHERPADHAGSRPGHLVTWSHV*TQRVLN
Trigger: ATTGAGCACCCTTTGTGTGCAGACATGGCTCCAGGT...GACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGCTCATGTGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp CACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAACAGCTCCCATGGACCTACACACCTCCCTaGAGGGAGTCTGCAATTGCC +
Preference number: 4 (lower is better)
Translates to: HEACHLSPQGPMLEQLPWTYTPP*RESAIA
Trigger: GGCAATTGCAGACTCCCTGCAGGGAGGTGTGTAGGT...CCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp GCAGAGCTCCATGGCACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGAGAGTCCTACCACCCTaGTCTCCTGCCCACCTACAC +
Preference number: 4 (lower is better)
Translates to: AELHGTAQNHEACHLSPQRVLPP*SPAHLH
Trigger: GTGTAGGTGGGCAGGAGAGCAGGGTGGTAGGACTCT...CTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp GCGCCGACCCACCCTCTCGATTACCACACAACTAACAACCGCCGTGAGCAGCTCAGAGTCCTACCACCCTaGTCTCCTGCCCACCTACAC +
Preference number: 4 (lower is better)
Translates to: APTHPLDYHTTNNRREQLRVLPP*SPAHLH
Trigger: GTGTAGGTGGGCAGGAGAGCAGGGTGGTAGGACTCT...GAGCTGCTCACGGCGGTTGTTAGTTGTGTGGTAATCGAGAGGGTGGGTCGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp CACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAAGAGGCCAGGCCAGATaGCTCTTTGCCAGAGTCCTA +
Preference number: 4 (lower is better)
Translates to: HCPEPRGLSPVSSGPDAGRGQAR*LFARVL
Trigger: TAGGACTCTGGCAAAGAGGCATCTGGCCTGGCCTCT...TCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp ATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGTCCTCCATCCGCCTCTaGCGCAGCACTGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: ITIPRAVKMAELMATAPRSSIRL*RSTEAE
Trigger: TTCAGCCTCAGTGCTGCGGCAGAGGCGGATGGAGGA...CCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR GCA 90 bp TCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTTCAGGAGCAGGATCCTaGCCTGAATCTGCGTCCGAG +
Preference number: 4 (lower is better)
Translates to: SELLRGALPQVHGLDVHASGAGS*PESASE
Trigger: CTCGGACGCAGATTCAGGGCAGGATCCTGCTCCTGA...AGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR GCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTCCTCAGCCGCAACCCTaGGCGATTCCCTGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCIPQPQP*AIPCAG
Trigger: ACCGGCGCAGGGAATCGCGCAGGGTTGCGGCTGAGG...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR GCA 90 bp CCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTTCTCGGCCAAGCCCCTaGATTCGCCCTCGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: PLRRGRASWYAYPYPLQPSRPSP*IRPRKC
Trigger: GCACTTGCGAGGGCGAATGCAGGGGCTTGGCCGAGA...AGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp GCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATTCTCCCCCAGGTACATaGGCTGGATGTTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: AHGHSSSELLRGALPQVHSPPGT*AGCSCS
Trigger: TGAGCATGAACATCCAGCCCATGTACCTGGGGGAGA...ATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR CCA 90 bp GAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTCACAGATGGCTGAGCTCATaGCCACAGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: ELLRGALPQVHGLDVHAHRWLSS*PQLLGA
Trigger: AGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCT...GTGAGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR CCA 90 bp TCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTAGATGGCTGAGCTCATaGCCACAGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: SELLRGALPQVHGLDVHARWLSS*PQLLGA
Trigger: AGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCT...AGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR CCA 90 bp CCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTAGATGGCTGAGCTCATaGCCACAGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PLPSQTRSGLLVCIPIPTRWLSS*PQLLGA
Trigger: AGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCT...AGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp ACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAAAGATGGCTGAGCTCATaGCCACAGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: TAQNHEACHLSPQGPMLERWLSS*PQLLGA
Trigger: AGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCT...TTCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp GGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATTCCCGCAGAGCTCCATaGCACTGCCCAGAACCACGA +
Preference number: 4 (lower is better)
Translates to: GRKQVSGSPGLGLGWVTDSRRAP*HCPEPR
Trigger: TCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGA...ATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp CACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGACAAAGATGCAGGCCATaGCCAGGTAGAGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HCPEPRGLSPVSSGPDAGQRCRP*PGRVSR
Trigger: CCTGGACACTCTACCTGGCCATGGCCTGCATCTTTG...TCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp AGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAAGGTCAAACAGCTCTGTaGCCAGGATCCCCGTCACTC +
Preference number: 4 (lower is better)
Translates to: RRRRTPSHSRRAPWHCPEGQTAL*PGSPSL
Trigger: GAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACC...TTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp CTCGCAGCTCCCAGTCCCGATGATCGCGTACTGGATCTTCGCTTCCGGCACTCCACAGGCCAGTGTAGATaGCCCCACAGACACAGACAC +
Preference number: 4 (lower is better)
Translates to: LAAPSPDDRVLDLRFRHSTGQCR*PHRHRH
Trigger: GTGTCTGTGTCTGTGGGGCCATCTACACTGGCCTGT...GGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGGGACTGGGAGCTGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp GCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGAAGGTCTTGCCTTTaGTCTCAGGAAGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: AHGHSSSELLRGALPQVHGRSCL*SQEGTG
Trigger: GCCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCC...ATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR CCA 90 bp AACCGCCGTGAGCAGCTCGCAGCTCCCAGTCCCGATGATCGCGTACTGGATCTTGACAGTAGCTGGCTTTaGCTCTGGCCACCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: NRREQLAAPSPDDRVLDLDSSWL*LWPPLW
Trigger: CCAAAGGGGTGGCCAGAGCCAAAGCCAGCTACTGTC...AAGATCCAGTACGCGATCATCGGGACTGGGAGCTGCGAGCTGCTCACGGCGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp GGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATGTGGTTCCCCAGGTCTaGGACTGGGGTGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: GRKQVSGSPGLGLGWVTDVVPQV*DWGGLL
Trigger: CAGTAACCCACCCCAGTCCCAGACCTGGGGAACCAC...ATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCGCCGGAAGGGAGCTCTaGTCCAAGGTCATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTAGREL*SKVISA
Trigger: GGCCGAGATGACCTTGGACCAGAGCTCCCTTCCGGC...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR TCA 90 bp CCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PLPSQTRSGLLVCIPIPTISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...AGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGAGCTCCTTAGACTTCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: PRAVKMAELMATAPRSSLDFFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGAAGTC...TAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000625546.2
ENST00000630215.2
CDS-3UTR TCA 90 bp CACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: HCPEPRGLSPVSSGPDAGAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...TCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp GGCAAAGATGCAGGCCATGGCCAGGTAGAGTGTCCAGGGGAAGGAGCTCTGCAGTGCTCACACCTGCATTaGCTCCCACGAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GKDAGHGQVECPGEGALQCSHLH*LPRAVF
Trigger: GAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCA...CTGCAGAGCTCCTTCCCCTGGACACTCTACCTGGCCATGGCCTGCATCTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp CCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: PLSDEVGPPGMHTHTHYNSRKDG*AHGHSS
Trigger: GGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCT...GTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTGGCACAGGGCCACAGTaGAGATGCTCCCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAGTGPQ*RCSPSR
Trigger: CCTGCTGGGGGAGCATCTTCACTGTGGCCCTGTGCC...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp ACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGAGCCCCGCCTGGGGAAGTTaGGTCTGTGTAATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: TIPRAVKMAELMATAPRSPAWGS*VCVIPW
Trigger: CCAAGGAATTACACAGACTCAACTTCCCCAGGCGGG...GCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR TCA 90 bp AGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAACCCGCCTGGGGAAGTTaGGTCTGTGTAATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RRRRTPSHSRRAPWHCPEPAWGS*VCVIPW
Trigger: CCAAGGAATTACACAGACTCAACTTCCCCAGGCGGG...TTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp ACCTGTCCCATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACATTCGAAAGAGGGGCCTaGGCGGAGGTCTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: TCPITIPRAVKMAELMATFERGA*AEVLLS
Trigger: GGACAGCAAGACCTCCGCTCAGGCCCCTCTTTCGAA...TGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGATGGGACAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436643.5
ENST00000627257.2
CDS-3UTR TCA 90 bp TTCCTTCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTGCTCCAAAGAGGCCTTCTTCCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: FLPSVMAKGPASSAPKRPSSFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAAGA...AGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR TCA 90 bp CCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTCTGGGATTACAGTCATaGGCTGCCACAACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PLPSQTRSGLLVCIPIPTLGLQS*AATTSL
Trigger: CAGGCTGGTTGTGGCAGCTCATGACTGTAATCCCAG...AGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp ACCTGTCCCATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAAGAGGCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: TCPITIPRAVKMAELMATRGFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGCCTCT...TGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGATGGGACAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436643.5
ENST00000627257.2
CDS-3UTR GCA 90 bp AAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGGAAAAGTCCCACCAATaGCGGCAGCGCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: KGNPRPTRMSMIHMSAPQEKSHQ*RQRRWS
Trigger: TGACCATCTGCGCTGCCGGCATTGGTGGGACTTTTC...CTGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp TGCATGTGGGGGAGGGGTGCTTACCTGAGTCCGACCACCTGTCCCATCACGATCGAAAAGTCCCACCAATaGCGGCAGCGCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: CMWGRGAYLSPTTCPITIEKSHQ*RQRRWS
Trigger: TGACCATCTGCGCTGCCGGCATTGGTGGGACTTTTC...GATCGTGATGGGACAGGTGGTCGGACTCAGGTAAGCACCCCTCCCCCACATGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR GCA 90 bp TGTCCCATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: CPITIPRAVKMAELMATAGTCKQ*SKEASQ
Trigger: CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCC...AGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGATGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTGTCKQ*SKEASQ
Trigger: CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCC...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp ACCTGCAAGCAGTGCTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TCKQCSKEASQGIQRHDEGTCKQ*SKEASQ
Trigger: CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCC...CTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR GCA 90 bp ACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGAGCGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: TIPRAVKMAELMATAPRSDGQGT*KQCSKE
Trigger: CTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATC...GCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp CTCGCAGCTCCCAGTCCCGATGATCGCGTACTGGATCTTCGCTTCCGGCACTCCGTTCATGCTCACACCTaGATTGACTCCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: LAAPSPDDRVLDLRFRHSVHAHT*IDSHEQ
Trigger: CTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAAC...GGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGGGACTGGGAGCTGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp AGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTGTTCATGCTCACACCTaGATTGACTCCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: SSSELLRGALPQVHGLDVVHAHT*IDSHEQ
Trigger: CTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAAC...AACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp AGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTCTCCTCAGGGCCCGATaGTGGAACAGCTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: SGSPGLGLGWVTDSKWACLLRAR*WNSSHG
Trigger: CCCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAG...ACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp CCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACAGAGCTCCATGGCACTaGCCAGAACCACGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: PLSDEVGPPGMHTHTHYNRAPWH*PEPRGL
Trigger: CAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCT...GTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp AGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTCGCTTCCGGCACTCCTaGCTTCCGGAACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: SGSPGLGLGWVTDSKWACRFRHS*LPEHGG
Trigger: TCCTCCGTGTTCCGGAAGGCAGGAGTGCCGGAAGCG...ACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp TTGCGACTGTTCCCCTACTCCCCACGGTGCAGATATGAGCCCAGTGGTCTAATCGAACCGGTCTCGGGTTaGCGCCAGGGGATCCATTGC +
Preference number: 4 (lower is better)
Translates to: LRLFPYSPRCRYEPSGLIEPVSG*RQGIHC
Trigger: GCAATGGATCCCCTGGCGGCAACCCGAGACCGGTTC...GATTAGACCACTGGGCTCATATCTGCACCGTGGGGAGTAGGGGAACAGTCGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR GCA 90 bp CTGGTCAAACAGCTCTGTGGCCAGGATCCCCGTCACTCCGGCAGGGCCAATGCCACCTGGAGCCATGTCTaGACACAAAGGGTGCTCAAT +
Preference number: 4 (lower is better)
Translates to: LVKQLCGQDPRHSGRANATWSHV*TQRVLN
Trigger: ATTGAGCACCCTTTGTGTGCAGACATGGCTCCAGGT...GGCATTGGCCCTGCCGGAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp CCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTTCAATTAGGACTCACTaGAGCCTCGACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PLPSQTRSGLLVCIPIPTSIRTH*SLDLPG
Trigger: GCCTGGGAGGTCGAGGCTGCAGTGAGTCCTAATTGA...AGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp CTGGTCAAACAGCTCTGTGGCCAGGATCCCCGTCACTCCGGCAGGGCCAATGCCTCTGCAATTGCCCCGTaGCTCTTCCTATCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: LVKQLCGQDPRHSGRANASAIAP*LFLSKS
Trigger: AGACTTGGATAGGAAGAGGCACGGGGCAATTGCAGA...GGCATTGGCCCTGCCGGAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp CTGGGTCTGAACATCAAGATCCCTCCCACCCAGGTTGGGACCAAGAGAGGACAGACCACCCTGCTCTCCTaGCCACCTACACACCTCCCT +
Preference number: 4 (lower is better)
Translates to: LGLNIKIPPTQVGTKRGQTTLLS*PPTHLP
Trigger: AGGGAGGTGTGTAGGTGGGCAGGAGAGCAGGGTGGT...CTGTCCTCTCTTGGTCCCAACCTGGGTGGGAGGGATCTTGATGTTCAGACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp ACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAAAGAGGCCAGGCCAGATaGCTCTTTGCCAGAGTCCTA +
Preference number: 4 (lower is better)
Translates to: TAQNHEACHLSPQGPMLERGQAR*LFARVL
Trigger: TAGGACTCTGGCAAAGAGGCATCTGGCCTGGCCTCT...TTCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp AGCAGTGCTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGGGACCACTCAGGAGCAGGATCCTaGCCTGAATCTGCGTCCGAG +
Preference number: 4 (lower is better)
Translates to: SSAPKRPPRGYRDTMRDHSGAGS*PESASE
Trigger: CTCGGACGCAGATTCAGGGCAGGATCCTGCTCCTGA...GTGGTCCCTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR GCA 90 bp CCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTCAGGAGCAGGATCCTaGCCTGAATCTGCGTCCGAG +
Preference number: 4 (lower is better)
Translates to: PSQTRSGLLVCIPIPTTTSGAGS*PESASE
Trigger: CTCGGACGCAGATTCAGGGCAGGATCCTGCTCCTGA...GGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR GCA 90 bp AGCAGTGCTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGGGACCACGCCAGATGGGAAAGATaGACTGGGCCTGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSAPKRPPRGYRDTMRDHARWER*TGPDPG
Trigger: CCCAGGATCAGGCCCAGTGCATCTTTCCCATCTGGC...GTGGTCCCTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR GCA 90 bp GGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATATTCGCCCTCGCAAGTaGCAGCAAGCGACTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GRKQVSGSPGLGLGWVTDIRPRK*QQATLV
Trigger: GACCAGAGTCGCTTGCTGGCACTTGCGAGGGCGAAT...ATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR GCA 90 bp AGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTTCTCGGCCAAGCCCCTaGATTCGCCCTCGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: SGSPGLGLGWVTDSKWACSRPSP*IRPRKC
Trigger: GCACTTGCGAGGGCGAATGCAGGGGCTTGGCCGAGA...ACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp AGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTTCTCCCCCAGGTACATaGGCTGGATGTTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: SSSELLRGALPQVHGLDVSPPGT*AGCSCS
Trigger: TGAGCATGAACATCCAGCCCATGTACCTGGGGGAGA...AACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR CCA 90 bp CCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACAGATGGCTGAGCTCATaGCCACAGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PLSDEVGPPGMHTHTHYNRWLSS*PQLLGA
Trigger: AGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCT...GTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp ATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGAGATGGCTGAGCTCATaGCCACAGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: ITIPRAVKMAELMATAPRRWLSS*PQLLGA
Trigger: AGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCT...CCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR CCA 90 bp CCCATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTAGATGGCTGAGCTCATaGCCACAGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PITIPRAVKMAELMATAPRWLSS*PQLLGA
Trigger: AGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCT...AGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR CCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCTCAGGGCCCGATGCTaGAACAGCTCCCATGGGCGC +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASLRARC*NSSHGR
Trigger: GCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAG...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp ACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAACCGATGATCGCGTACTaGATCTTCGCTTCCGGCACT +
Preference number: 4 (lower is better)
Translates to: TAQNHEACHLSPQGPMLEPMIAY*IFASGT
Trigger: AGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGG...TTCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp AGTCCCGATGATCGCGTACTGGATCTTCGCTTCCGGCACTCCTGCCTTCCGGAAGGTCAAACAGCTCTGTaGCCAGGATCCCCGTCACTC +
Preference number: 4 (lower is better)
Translates to: SPDDRVLDLRFRHSCLPEGQTAL*PGSPSL
Trigger: GAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACC...TTCCGGAAGGCAGGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp GGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATGGTCAAACAGCTCTGTaGCCAGGATCCCCGTCACTC +
Preference number: 4 (lower is better)
Translates to: GRKQVSGSPGLGLGWVTDGQTAL*PGSPSL
Trigger: GAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACC...ATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp GATTACCACACAACTAACAACCGCCGTGAGCAGCTCGCAGCTCCCAGTCCCGATGCAGGCCTGGCCATCTaGTCAAACAGCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: DYHTTNNRREQLAAPSPDAGLAI*SNSSVA
Trigger: GGCCACAGAGCTGTTTGACCAGATGGCCAGGCCTGC...ATCGGGACTGGGAGCTGCGAGCTGCTCACGGCGGTTGTTAGTTGTGTGGTAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGCAGGCCTGGCCATCTaGTCAAACAGCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGAGLAI*SNSSVA
Trigger: GGCCACAGAGCTGTTTGACCAGATGGCCAGGCCTGC...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp ACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACTGCAGGCAGCAGGCCTaGCCATCTGGTCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: TPLSDEVGPPGMHTHTHYCRQQA*PSGQTA
Trigger: AGCTGTTTGACCAGATGGCCAGGCCTGCTGCCTGCA...GTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp GGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAACCACGAGGGAAGGTCTTGCCTTTaGTCTCAGGAAGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: GVHRVIPAELHGTAQNHEGRSCL*SQEGTG
Trigger: GCCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCC...CTCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp AAAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGACAGTAGCTGGCTTTaGCTCTGGCCACCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: KGKSQADQDEHDPHERPADSSWL*LWPPLW
Trigger: CCAAAGGGGTGGCCAGAGCCAAAGCCAGCTACTGTC...TGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp GATCCACATGAGCGCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTGGTCGCTACCTTGAACTCTTaGACTCAAGTGATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: DPHERPADHAGSRPGHLVATLNS*TQVILL
Trigger: CAGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGC...GACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGCTCATGTGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCGTGGTTCCCCAGGTCTaGGACTGGGGTGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTVVPQV*DWGGLL
Trigger: CAGTAACCCACCCCAGTCCCAGACCTGGGGAACCAC...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp GTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTGTGGTTCCCCAGGTCTaGGACTGGGGTGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: VPQVWDWGGLLIANGHVGVVPQV*DWGGLL
Trigger: CAGTAACCCACCCCAGTCCCAGACCTGGGGAACCAC...ACCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp AAAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGTTAAGCCTCCCAGGTaGCTGCACCTGCGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: KGKSQADQDEHDPHERPAVKPPR*LHLRSS
Trigger: TGAACTGCGCAGGTGCAGCCACCTGGGAGGCTTAAC...TGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CCA 90 bp GCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATAATACTCAATGCATGTaGGGGAGGGGTGCTTACCTG +
Preference number: 4 (lower is better)
Translates to: AHGHSSSELLRGALPQVHNTQCM*GRGAYL
Trigger: CAGGTAAGCACCCCTCCCCCACATGCATTGAGTATT...ATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR CCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTGCCAGCAAGCGACTCTaGTCGCCGCGCTCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCIASKRL*SPRSQV
Trigger: GACTTGGGAGCGCGGCGACCAGAGTCGCTTGCTGGC...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR TCA 90 bp CCCATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PITIPRAVKMAELMATAPISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...AGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp CCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGAGCTCCTTAATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PRAVKMAELMATAPRSSLISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...TAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp CTGCAGGCACAGGGCCACAGTGAAGATGCTCCCCCAGCAGGTCATCAGGCTGTAAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: LQAQGHSEDAPPAGHQAVSLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...TACAGCCTGATGACCTGCTGGGGGAGCATCTTCACTGTGGCCCTGTGCCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp GAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTCACAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: ELLRGALPQVHGLDVHAHSLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...GTGAGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp AGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAAGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RRRRTPSHSRRAPWHCPEAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...TTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp GAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTCACGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ELLRGALPQVHGLDVHAHAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...GTGAGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp ACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACTGCTCACACCTGCATTaGCTCCCACGAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: TPLSDEVGPPGMHTHTHYCSHLH*LPRAVF
Trigger: GAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCA...GTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTGCTCACACCTGCATTaGCTCCCACGAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: QLRQKAGQWFPRSGTGVGCSHLH*LPRAVF
Trigger: GAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCA...ACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGAGCTCCTTATGCTCACACCTGCATTaGCTCCCACGAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PRAVKMAELMATAPRSSLCSHLH*LPRAVF
Trigger: GAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCA...TAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp GTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: VPQVWDWGGLLIANGHVGSRKDG*AHGHSS
Trigger: GGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCT...ACCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp AAAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCACCCGCCTGGGGAAGTTaGGTCTGTGTAATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KGKSQADQDEHDPHERPAPAWGS*VCVIPW
Trigger: CCAAGGAATTACACAGACTCAACTTCCCCAGGCGGG...TGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp CCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTTCTTCCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: PLRRGRASWYAYPYPLQPSSFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAAGA...AGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCTCTTCCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTSSFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAAGA...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp ACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACTGTCTCCACAGTCAATaGGGAGGTAGCGCGGGCTTT +
Preference number: 4 (lower is better)
Translates to: TPLSDEVGPPGMHTHTHYCLHSQ*GGSAGF
Trigger: AAAGCCCGCGCTACCTCCTCATTGACTGTGGAGACA...GTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CTGGGTCTGAACATCAAGATCCCTCCCACCCAGGTTGGGACCAAGAGAGGACAGGCTGCCTCAGCCTCCTaGGTAGCTAGAGCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: LGLNIKIPPTQVGTKRGQAASAS*VARAVS
Trigger: GCTAACAGCTCTAGCTACTCAGGAGGCTGAGGCAGC...CTGTCCTCTCTTGGTCCCAACCTGGGTGGGAGGGATCTTGATGTTCAGACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGCTGCCTCAGCCTCCTaGGTAGCTAGAGCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGAASAS*VARAVS
Trigger: GCTAACAGCTCTAGCTACTCAGGAGGCTGAGGCAGC...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp ACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAATCACCCTCTCCTCTGTaGAGACCTGTTCTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: TAQNHEACHLSPQGPMLESPSPL*RPVLCS
Trigger: GGAGCAAAGAACAGGTCTTCACAGAGGAGAGGGTGA...TTCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp GCGCCGACCCACCCTCTCGATTACCACACAACTAACAACCGCCGTGAGCAGCTCTCACCCTCTCCTCTGTaGAGACCTGTTCTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: APTHPLDYHTTNNRREQLSPSPL*RPVLCS
Trigger: GGAGCAAAGAACAGGTCTTCACAGAGGAGAGGGTGA...GAGCTGCTCACGGCGGTTGTTAGTTGTGTGGTAATCGAGAGGGTGGGTCGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp AGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTCACAGAAAAGTCCCACCAATaGCGGCAGCGCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: SSLGALSPRYMGWMFMLTEKSHQ*RQRRWS
Trigger: TGACCATCTGCGCTGCCGGCATTGGTGGGACTTTTC...TGTGAGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp AGCAGTGCTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGGGACCACGAAAAGTCCCACCAATaGCGGCAGCGCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: SSAPKRPPRGYRDTMRDHEKSHQ*RQRRWS
Trigger: TGACCATCTGCGCTGCCGGCATTGGTGGGACTTTTC...GTGGTCCCTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR GCA 90 bp CACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGATCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: HCPEPRGLSPVSSGPDAGSPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...TCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp GGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAACCACGAGTCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: GVHRVIPAELHGTAQNHESPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...CTCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp TTCCCCTACTCCCCACGGTGCAGATATGAGCCCAGTGGTCTAATCCAGTCTTGCGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: FPYSPRCRYEPSGLIQSCGTCKQ*SKEASQ
Trigger: CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCC...GCAAGACTGGATTAGACCACTGGGCTCATATCTGCACCGTGGGGAGTAGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR GCA 90 bp CAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: QLRQKAGQWFPRSGTGVGDGQGT*KQCSKE
Trigger: CTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATC...ACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp CCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTAGAGCTCCATGGCACTaGCCAGAACCACGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: PLRRGRASWYAYPYPLQPRAPWH*PEPRGL
Trigger: CAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCT...AGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTCGCTTCCGGCACTCCTaGCTTCCGGAACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCIRFRHS*LPEHGG
Trigger: TCCTCCGTGTTCCGGAAGGCAGGAGTGCCGGAAGCG...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTCGCTTCCGGCACTCCTaGCTTCCGGAACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGARFRHS*LPEHGG
Trigger: TCCTCCGTGTTCCGGAAGGCAGGAGTGCCGGAAGCG...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAGGGGAAGGAGCTCTaGAGGCACAGGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASQGKEL*RHRATV
Trigger: CACTGTGGCCCTGTGCCTGCAGAGCTCCTTCCCCTG...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CTGGGGAAGTTGAGTCTGTGTAATTCCTTGGAGATCTCTTGGAAGGTCTTGCCTGCGCCCCGCAGACCATaGAGGCAGCAGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LGKLSLCNSLEISWKVLPAPRRP*RQQAWP
Trigger: TGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGC...AGGCAAGACCTTCCAAGAGATCTCCAAGGAATTACACAGACTCAACTTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp GGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGTCTCTTGGAAGGTCTTaGCTTTGGTCTCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GGVGVHRVIPAELHGTAQSLGRS*LWSQEG
Trigger: TCCTTCCTGAGACCAAAGGCAAGACCTTCCAAGAGA...CTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCGGCAGGTCCGACTTATaGTGGGGGCACTTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTGRSDL*WGHLEL
Trigger: CAACTCCAAGTGCCCCCAGCATAAGTCGGACCTGCC...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR GCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCGAACCGGTCTCGGGTTaGCGCCAGGGGATCCATTGC +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASEPVSG*RQGIHC
Trigger: GCAATGGATCCCCTGGCGGCAACCCGAGACCGGTTC...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000618502.4
ENST00000619254.4
CDS-3UTR GCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTGAACCGGTCTCGGGTTaGCGCCAGGGGATCCATTGC +
Preference number: 4 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCIEPVSG*RQGIHC
Trigger: GCAATGGATCCCCTGGCGGCAACCCGAGACCGGTTC...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR GCA 90 bp GCTTACCTGAGTCCGACCACCTGTCCCATCACGATCCCCAGAGCCGTAAAGATGTCAGGAGCAGGATCCTaGCCTGAATCTGCGTCCGAG +
Preference number: 4 (lower is better)
Translates to: AYLSPTTCPITIPRAVKMSGAGS*PESASE
Trigger: CTCGGACGCAGATTCAGGGCAGGATCCTGCTCCTGA...CATCTTTACGGCTCTGGGGATCGTGATGGGACAGGTGGTCGGACTCAGGTAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR CCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTTGCCGGCAGCGCAGATaGTCAGGAGCAGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGACRQRR*SGAGSC
Trigger: GCAGGATCCTGCTCCTGACCATCTGCGCTGCCGGCA...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp TCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTTCTCCCCCAGGTACATaGGCTGGATGTTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: SELLRGALPQVHGLDVHASPPGT*AGCSCS
Trigger: TGAGCATGAACATCCAGCCCATGTACCTGGGGGAGA...AGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR CCA 90 bp GAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTCACTCTCCCCCAGGTACATaGGCTGGATGTTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: ELLRGALPQVHGLDVHAHSPPGT*AGCSCS
Trigger: TGAGCATGAACATCCAGCCCATGTACCTGGGGGAGA...GTGAGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR CCA 90 bp ACCTGTCCCATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAAGATGGCTGAGCTCATaGCCACAGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: TCPITIPRAVKMAELMATRWLSS*PQLLGA
Trigger: AGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCT...TGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGATGGGACAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR CCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCACTCAGGGCCCGATGCTaGAACAGCTCCCATGGGCGC +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPLRARC*NSSHGR
Trigger: GCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAG...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp ATCTCAAAGGAGCCTGCTTTGCGGCTGAATCCAAACAGGATTGCTGCTGACACCCTCAGGGCCCGATGCTaGAACAGCTCCCATGGGCGC +
Preference number: 4 (lower is better)
Translates to: ISKEPALRLNPNRIAADTLRARC*NSSHGR
Trigger: GCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAG...GGTGTCAGCAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR CCA 90 bp TCTCAGGAAGGAACAGGCCAGTGTAGATGGCCCCACAGACACAGACACCAAGGATCCCGCAGAGCTCCATaGCACTGCCCAGAACCACGA +
Preference number: 4 (lower is better)
Translates to: SQEGTGQCRWPHRHRHQGSRRAP*HCPEPR
Trigger: TCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGA...TCCTTGGTGTCTGTGTCTGTGGGGCCATCTACACTGGCCTGTTCCTTCCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp CCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCCCGATGATCGCGTACTaGATCTTCGCTTCCGGCACT +
Preference number: 4 (lower is better)
Translates to: PSQTRSGLLVCIPIPTTTPMIAY*IFASGT
Trigger: AGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGG...GGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp ACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACCCGATGATCGCGTACTaGATCTTCGCTTCCGGCACT +
Preference number: 4 (lower is better)
Translates to: TPLSDEVGPPGMHTHTHYPMIAY*IFASGT
Trigger: AGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGG...GTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp AAAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCACCGATGATCGCGTACTaGATCTTCGCTTCCGGCACT +
Preference number: 4 (lower is better)
Translates to: KGKSQADQDEHDPHERPAPMIAY*IFASGT
Trigger: AGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGG...TGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp ACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACCAAAGATGCAGGCCATaGCCAGGTAGAGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TPLSDEVGPPGMHTHTHYQRCRP*PGRVSR
Trigger: CCTGGACACTCTACCTGGCCATGGCCTGCATCTTTG...GTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp GGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATCAAAGATGCAGGCCATaGCCAGGTAGAGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GRKQVSGSPGLGLGWVTDQRCRP*PGRVSR
Trigger: CCTGGACACTCTACCTGGCCATGGCCTGCATCTTTG...ATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCGGTCAAACAGCTCTGTaGCCAGGATCCCCGTCACTC +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTGQTAL*PGSPSL
Trigger: GAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACC...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp CAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTACAGGCCAGTGTAGATaGCCCCACAGACACAGACAC +
Preference number: 4 (lower is better)
Translates to: QLRQKAGQWFPRSGTGVGTGQCR*PHRHRH
Trigger: GTGTCTGTGTCTGTGGGGCCATCTACACTGGCCTGT...ACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp AAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGGGAAGGTCTTGCCTTTaGTCTCAGGAAGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: KGNPRPTRMSMIHMSAPQGRSCL*SQEGTG
Trigger: GCCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCC...CTGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp GGCAAAGATGCAGGCCATGGCCAGGTAGAGTGTCCAGGGGAAGGAGCTCTGCAGGGAAGGTCTTGCCTTTaGTCTCAGGAAGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: GKDAGHGQVECPGEGALQGRSCL*SQEGTG
Trigger: GCCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCC...CTGCAGAGCTCCTTCCCCTGGACACTCTACCTGGCCATGGCCTGCATCTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp CACATGAGCGCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTGGTCAAACTCCTTGGAGATCTCTTaGAAGGTCTTGCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: HMSAPQTMQAAGLAIWSNSLEIS*KVLPLV
Trigger: GACCAAAGGCAAGACCTTCCAAGAGATCTCCAAGGA...GTTTGACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGCTCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCGACAGTAGCTGGCTTTaGCTCTGGCCACCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTDSSWL*LWPPLW
Trigger: CCAAAGGGGTGGCCAGAGCCAAAGCCAGCTACTGTC...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp GTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTGACAGTAGCTGGCTTTaGCTCTGGCCACCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: VPQVWDWGGLLIANGHVGDSSWL*LWPPLW
Trigger: CCAAAGGGGTGGCCAGAGCCAAAGCCAGCTACTGTC...ACCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp CCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTTCTCAGGCCCTGCATaGAGGAATCCAGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PSQTRSGLLVCIPIPTTTFSGPA*RNPGAG
Trigger: TCCAGCTCCTGGATTCCTCCATGCAGGGCCTGAGAA...GGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CCA 90 bp CGGAGGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCGCTGGTTTCAAACTCTaGCCTCAATTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RRRRRRTPSHSRRAPWHCAGFKL*PQLILP
Trigger: TGGGAGGATCAATTGAGGCCAGAGTTTGAAACCAGC...GCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCTCCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CCA 90 bp AGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAACCACGACTATGTGGCCCAGGCTaGTCTCAAACTTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: RRTPSHSRRAPWHCPEPRLCGPG*SQTSGL
Trigger: GAGACCAGAAGTTTGAGACCAGCCTGGGCCACATAG...TCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CCA 90 bp GTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCACGAGGTCGGGCCTCCTaGTATGCATACCCATACCCA +
Preference number: 4 (lower is better)
Translates to: VSGSPGLGLGWVTDSKWARGRAS*YAYPYP
Trigger: TGGGTATGGGTATGCATACCAGGAGGCCCGACCTCG...TGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp GCCTCCATGATAAAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGCCCTCCCACCCAGGTTaGGACCAAGAGAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: ASMIKGNPRPTRMSMIHMPSHPG*DQERTG
Trigger: CCCTGTCCTCTCTTGGTCCCAACCTGGGTGGGAGGG...CATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTTTATCATGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGGGCGGGGGTGAGGTaGAAGTCAGCCCGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLGAGVR*KSARPG
Trigger: TCCAGGCCGGGCTGACTTCCACCTCACCCCCGCCCC...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp CCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCGGAGGGCCAAGCCCTTaGTTGTGCACATCTATGCAC +
Preference number: 4 (lower is better)
Translates to: PSQTRSGLLVCIPIPTTTGGPSP*LCTSMH
Trigger: GTGCATAGATGTGCACAACCAAGGGCTTGGCCCTCC...GGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp CCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTCTCTGTCTCTCGCTaGTCTGACCTCAGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: PLRRGRASWYAYPYPLQPVSVSR*SDLSRN
Trigger: GTTGCGGCTGAGGTCAGACCAGCGAGAGACAGAGAC...AGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR TCA 90 bp GCTTACCTGAGTCCGACCACCTGTCCCATCACGATCCCCAGAGCCGTAAAGATGATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: AYLSPTTCPITIPRAVKMISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...CATCTTTACGGCTCTGGGGATCGTGATGGGACAGGTGGTCGGACTCAGGTAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR TCA 90 bp TACTCAATGCATGTGGGGGAGGGGTGCTTACCTGAGTCCGACCACCTGTCCCATATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: YSMHVGEGCLPESDHLSHISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...ATGGGACAGGTGGTCGGACTCAGGTAAGCACCCCTCCCCCACATGCATTGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR TCA 90 bp ATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: ITIPRAVKMAELMATAPRSLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...CCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp GGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: GSPGLGLGWVTDSKWACGSLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...CCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp ATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ITIPRAVKMAELMATAPRAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...CCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp CCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PLSDEVGPPGMHTHTHYNAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...GTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp TACTCAATGCATGTGGGGGAGGGGTGCTTACCTGAGTCCGACCACCTGTCCCATTGCTCACACCTGCATTaGCTCCCACGAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: YSMHVGEGCLPESDHLSHCSHLH*LPRAVF
Trigger: GAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCA...ATGGGACAGGTGGTCGGACTCAGGTAAGCACCCCTCCCCCACATGCATTGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR TCA 90 bp AAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGGGACTAGAGTTCTGTTaGCTGGATAACCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: KGNPRPTRMSMIHMSAPQGLEFC*LDNLQA
Trigger: AGCCTGGAGGTTATCCAGTCAACAGAACTCTAGTCC...CTGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp GATTACCACACAACTAACAACCGCCGTGAGCAGCTCGCAGCTCCCAGTCCCGATTGTCTCCACAGTCAATaGGGAGGTAGCGCGGGCTTT +
Preference number: 4 (lower is better)
Translates to: DYHTTNNRREQLAAPSPDCLHSQ*GGSAGF
Trigger: AAAGCCCGCGCTACCTCCTCATTGACTGTGGAGACA...ATCGGGACTGGGAGCTGCGAGCTGCTCACGGCGGTTGTTAGTTGTGTGGTAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGAGGGGATCCATTGCGTaGGAGGCAGGTCCGACTTAT +
Preference number: 4 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGRGSIA*EAGPTY
Trigger: ATAAGTCGGACCTGCCTCTCACGCAATGGATCCCCT...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR GCA 90 bp GGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATTCAGGAGCAGGATCCTaGCCTGAATCAGTCTTCGGA +
Preference number: 4 (lower is better)
Translates to: GRKQVSGSPGLGLGWVTDSGAGS*PESVFG
Trigger: TCCGAAGACTGATTCAGGGCAGGATCCTGCTCCTGA...ATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR GCA 90 bp CAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTCAGGAGCAGGATCCTaGCCTGAATCAGTCTTCGGA +
Preference number: 4 (lower is better)
Translates to: QLRQKAGQWFPRSGTGVGSGAGS*PESVFG
Trigger: TCCGAAGACTGATTCAGGGCAGGATCCTGCTCCTGA...ACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR GCA 90 bp TACTCAATGCATGTGGGGGAGGGGTGCTTACCTGAGTCCGACCACCTGTCCCATGAAAAGTCCCACCAATaGCGGCAGCGCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: YSMHVGEGCLPESDHLSHEKSHQ*RQRRWS
Trigger: TGACCATCTGCGCTGCCGGCATTGGTGGGACTTTTC...ATGGGACAGGTGGTCGGACTCAGGTAAGCACCCCTCCCCCACATGCATTGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR GCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASGTCKQ*SKEASQ
Trigger: CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCC...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp GCCTCCATGATAAAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ASMIKGNPRPTRMSMIHMGTCKQ*SKEASQ
Trigger: CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCC...CATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTTTATCATGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAGTCKQ*SKEASQ
Trigger: CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCC...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCIGTCKQ*SKEASQ
Trigger: CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCC...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp CTGGATGTTCATGCTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LDVHAHTCIDSHEQSSQHGTCKQ*SKEASQ
Trigger: CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCC...ATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAACATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp ACCTGTCCCATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: TCPITIPRAVKMAELMATDGQGT*KQCSKE
Trigger: CTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATC...TGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGATGGGACAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp CTGCCTTCCGGAACACGGAGGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGACATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: LPSGTRRRRRRTPSHSRRHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...TCTGCGGGAATGACTCGGTGTACGCCTACGCCTCCTCCGTGTTCCGGAAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp AGCTCCTCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: SSSELLRGALPQVHGLDVHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...AACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGAGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp GCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGAGCTCCTTAGGGGCGCATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: AVKMAELMATAPRSSLGAHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...CGCCCCTAAGGAGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCACTCCTCAGGGCCCGATaGTGGAACAGCTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPLLRAR*WNSSHG
Trigger: CCCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAG...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp GCCCAGTGGTCTAATCCAGTCTTGCTGATCCAGTGCTGGTGCTATGGTTTGAAGCGCCAGGGGATCCATTaGGTGAGAGGCAGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: AQWSNPVLLIQCWCYGLKRQGIH*VRGRSD
Trigger: GTCGGACCTGCCTCTCACGCAATGGATCCCCTGGCG...CTTCAAACCATAGCACCAGCACTGGATCAGCAAGACTGGATTAGACCACTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR GCA 90 bp CCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTTCAATTAGGACTCACTaGAGCCTCGACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PLRRGRASWYAYPYPLQPSIRTH*SLDLPG
Trigger: GCCTGGGAGGTCGAGGCTGCAGTGAGTCCTAATTGA...AGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp TTCCTATCCAAGTCTGGGTCTGAACATCAAGATCCCTCCCACCCAGGTTGGGACAGAGGACAGGGCCACTaGCCCACCTCATCCCTAGCA +
Preference number: 4 (lower is better)
Translates to: FLSKSGSEHQDPSHPGWDRGQGH*PTSSLA
Trigger: TGCTAGGGATGAGGTGGGGCAGTGGCCCTGTCCTCT...GTCCCAACCTGGGTGGGAGGGATCTTGATGTTCAGACCCAGACTTGGATAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp GATTACCACACAACTAACAACCGCCGTGAGCAGCTCGCAGCTCCCAGTCCCGATACCTACACACCTCCCTaGAGGGAGTCTGCAATTGCC +
Preference number: 4 (lower is better)
Translates to: DYHTTNNRREQLAAPSPDTYTPP*RESAIA
Trigger: GGCAATTGCAGACTCCCTGCAGGGAGGTGTGTAGGT...ATCGGGACTGGGAGCTGCGAGCTGCTCACGGCGGTTGTTAGTTGTGTGGTAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTTCCTCCATCCGCCTCTaGCGCAGCACTGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGASSIRL*RSTEAE
Trigger: TTCAGCCTCAGTGCTGCGGCAGAGGCGGATGGAGGA...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398356.6
ENST00000611880.4
ENST00000618114.2
ENST00000619254.4
CDS-3UTR GCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCTCCTCCATCCGCCTCTaGCGCAGCACTGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASSSIRL*RSTEAE
Trigger: TTCAGCCTCAGTGCTGCGGCAGAGGCGGATGGAGGA...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398356.6
ENST00000611880.4
ENST00000618114.2
ENST00000619254.4
CDS-3UTR GCA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGCCAAGCCCTTGGTTGTaGACATCTATGCACGCCCCA +
Preference number: 4 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGPSPWL*TSMHAP
Trigger: TGGGGCGTGCATAGATGTGCACAACCAAGGGCTTGG...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR GCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTCCCCAAGCTCATCTCTaGAGGCCGGAAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAPQAHL*RPEGSS
Trigger: AGAGCTCCCTTCCGGCCTGCAGAGATGAGCTTGGGG...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCATGCCGGCAGCGCAGATaGTCAGGAGCAGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPCRQRR*SGAGSC
Trigger: GCAGGATCCTGCTCCTGACCATCTGCGCTGCCGGCA...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp GCCCAGTGGTCTAATCCAGTCTTGCTGATCCAGTGCTGGTGCTATGGTTTGAAGTGCCGGCAGCGCAGATaGTCAGGAGCAGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: AQWSNPVLLIQCWCYGLKCRQRR*SGAGSC
Trigger: GCAGGATCCTGCTCCTGACCATCTGCGCTGCCGGCA...CTTCAAACCATAGCACCAGCACTGGATCAGCAAGACTGGATTAGACCACTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR CCA 90 bp ACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACTCTCCCCCAGGTACATaGGCTGGATGTTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: TPLSDEVGPPGMHTHTHYSPPGT*AGCSCS
Trigger: TGAGCATGAACATCCAGCCCATGTACCTGGGGGAGA...GTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp CAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTCTCCCCCAGGTACATaGGCTGGATGTTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: QLRQKAGQWFPRSGTGVGSPPGT*AGCSCS
Trigger: TGAGCATGAACATCCAGCCCATGTACCTGGGGGAGA...ACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTTCCCGCAGAGCTCCATaGCACTGCCCAGAACCACGA +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGASRRAP*HCPEPR
Trigger: TCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGA...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGCCGATGATCGCGTACTaGATCTTCGCTTCCGGCACT +
Preference number: 4 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGPMIAY*IFASGT
Trigger: AGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGG...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp GTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTCAAAGATGCAGGCCATaGCCAGGTAGAGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPQVWDWGGLLIANGHVGQRCRP*PGRVSR
Trigger: CCTGGACACTCTACCTGGCCATGGCCTGCATCTTTG...ACCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTGCAGGCCTGGCCATCTaGTCAAACAGCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAAGLAI*SNSSVA
Trigger: GGCCACAGAGCTGTTTGACCAGATGGCCAGGCCTGC...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCACAGGCCAGTGTAGATaGCCCCACAGACACAGACAC +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTTGQCR*PHRHRH
Trigger: GTGTCTGTGTCTGTGGGGCCATCTACACTGGCCTGT...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp GGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGGGAAGGTCTTGCCTTTaGTCTCAGGAAGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: GSPGLGLGWVTDSKWACGGRSCL*SQEGTG
Trigger: GCCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCC...CCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp CAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTGGAAGGTCTTGCCTTTaGTCTCAGGAAGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: QLRQKAGQWFPRSGTGVGGRSCL*SQEGTG
Trigger: GCCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCC...ACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp GTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCAAGGTCCGACTTATGCTaGGGGCACTTGGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: VSGSPGLGLGWVTDSKWARSDLC*GHLELR
Trigger: CCTCAACTCCAAGTGCCCCCAGCATAAGTCGGACCT...TGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CCA 90 bp CTGTTCCCCTACTCCCCACGGTGCAGATATGAGCCCAGTGGTCTAATCCAGTCTGCAGAGCGAGAGACTTaGCGGAATGCGGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: LFPYSPRCRYEPSGLIQSAERET*RNAGRR
Trigger: TCTCCTACCCGCATTCCGCCAAGTCTCTCGCTCTGC...AGACTGGATTAGACCACTGGGCTCATATCTGCACCGTGGGGAGTAGGGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR CCA 90 bp CGGAGGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCTATGTTACCTAGGCTaGTTTCAAACTCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RRRRRRTPSHSRRAPWHCLCYLG*FQTLAS
Trigger: TGAGGCCAGAGTTTGAAACCAGCCTAGGTAACATAG...GCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCTCCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CCA 90 bp GGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGACCGCTACCTTGAACTCTTaGACTCAAGTGATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GNPRPTRMSMIHMSAPQTATLNS*TQVILL
Trigger: CAGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGC...GGTCTGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCGTGGTTCCCCAGGTCTaGGACTGGGGTGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASVVPQV*DWGGLL
Trigger: CAGTAACCCACCCCAGTCCCAGACCTGGGGAACCAC...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGGAGGGCCAAGCCCTTaGTTGTGCACATCTATGCAC +
Preference number: 4 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGGGPSP*LCTSMH
Trigger: GTGCATAGATGTGCACAACCAAGGGCTTGGCCCTCC...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR TCA 90 bp GATCCACATGAGCGCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTGGTCAAACAGGATTGCTGCTaGCACCACAAAGATGTTATT +
Preference number: 4 (lower is better)
Translates to: DPHERPADHAGSRPGHLVKQDCC*HHKDVI
Trigger: AATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTT...GACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGCTCATGTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp GATTACCACACAACTAACAACCGCCGTGAGCAGCTCGCAGCTCCCAGTCCCGATAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: DYHTTNNRREQLAAPSPDSLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...ATCGGGACTGGGAGCTGCGAGCTGCTCACGGCGGTTGTTAGTTGTGTGGTAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp TGTCCCATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: CPITIPRAVKMAELMATASLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...AGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGATGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp CCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PLRRGRASWYAYPYPLQPAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...AGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CATGCTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATGATCATCTCAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: HAHTCIDSHEQSSQHDHLSRKDG*AHGHSS
Trigger: GGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCT...GAGATGATCATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASSRKDG*AHGHSS
Trigger: GGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCT...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCAGCTCCCAGTCCCGATaGTCGCGTACTGGATCTTCG +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASSSQSR*SRTGSS
Trigger: CGAAGATCCAGTACGCGATCATCGGGACTGGGAGCT...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTAGCTCCCAGTCCCGATaGTCGCGTACTGGATCTTCG +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGASSQSR*SRTGSS
Trigger: CGAAGATCCAGTACGCGATCATCGGGACTGGGAGCT...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCACAGGGCCACAGTaGAGATGCTCCCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLGTGPQ*RCSPSR
Trigger: CCTGCTGGGGGAGCATCTTCACTGTGGCCCTGTGCC...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp GGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGGGACTAGAGTTCTGTTaGCTGGATAACCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GSPGLGLGWVTDSKWACGGLEFC*LDNLQA
Trigger: AGCCTGGAGGTTATCCAGTCAACAGAACTCTAGTCC...CCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp ACAACTAACAACCGCCGTGAGCAGCTCGCAGCTCCCAGTCCCGATGATCGCGTAGGACTAGAGTTCTGTTaGCTGGATAACCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TTNNRREQLAAPSPDDRVGLEFC*LDNLQA
Trigger: AGCCTGGAGGTTATCCAGTCAACAGAACTCTAGTCC...TACGCGATCATCGGGACTGGGAGCTGCGAGCTGCTCACGGCGGTTGTTAGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp TTCATGCTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATGATCATCTTCGAAAGAGGGGCCTaGGCGGAGGTCTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FMLTPALTPTSSLPSMIIFERGA*AEVLLS
Trigger: GGACAGCAAGACCTCCGCTCAGGCCCCTCTTTCGAA...GATGATCATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436643.5
ENST00000627257.2
CDS-3UTR TCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCTCTTCCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASSSFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAAGA...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp GCCTCCATGATAAAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGTCTTCCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: ASMIKGNPRPTRMSMIHMSSFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAAGA...CATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTTTATCATGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCTACCACGCTCACCATTaGTTGCTAAGCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTYHAHH*LLSTWS
Trigger: GCTCCAGGTGCTTAGCAATCAATGGTGAGCGTGGTA...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCGCTGCCTCAGCCTCCTaGGTAGCTAGAGCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASAASAS*VARAVS
Trigger: GCTAACAGCTCTAGCTACTCAGGAGGCTGAGGCAGC...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp GTAGCTGGCTTTGGCTCTGGCCACCCCTTTGGGACTAGAGTTCTGTTGACTGGAACTCTTGGACTCAAGTaGTCCTGCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VAGFGSGHPFGTRVLLTGTLGLK*SCCLSL
Trigger: GAGGCTGAGGCAGCAGGATCACTTGAGTCCAAGAGT...TCCAGTCAACAGAACTCTAGTCCCAAAGGGGTGGCCAGAGCCAAAGCCAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp CCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTGCAAATCTGACCAATTaGGGCAGAAAGCAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: PLPSQTRSGLLVCIPIPTANLTN*GRKQVS
Trigger: ACTGACCTGCTTTCTGCCTCAATTGGTCAGATTTGC...AGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CATGATCATCTCAAAGGAGCCTGCTTTGCGGCTGAATCCAAACAGGATTGCTGCGGAGGGGTGCTTACCTaGGTCCGACCACCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: HDHLKGACFAAESKQDCCGGVLT*VRPPVP
Trigger: TGGGACAGGTGGTCGGACTCAGGTAAGCACCCCTCC...GCAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATGATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR TCA 90 bp CCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTGCTCCAAAGAGGCCTCCCAGGACCTCAATGTGTTCATaGACCTGGAAGCTCATCAAA +
Preference number: 4 (lower is better)
Translates to: PSVMAKGPASSAPKRPPRTSMCS*TWKLIK
Trigger: TTTGATGAGCTTCCAGGTTCATGAACACATTGAGGT...CCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR GCA 90 bp GGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: GSPGLGLGWVTDSKWACGSPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...CCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp GGGTGCTTACCTGAGTCCGACCACCTGTCCCATCACGATCCCCAGAGCCGTAAATCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: GCLPESDHLSHHDPQSRKSPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...TTTACGGCTCTGGGGATCGTGATGGGACAGGTGGTCGGACTCAGGTAAGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR GCA 90 bp ACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACTCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: TPLSDEVGPPGMHTHTHYSPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...GTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp GGTGCTTACCTGAGTCCGACCACCTGTCCCATCACGATCCCCAGAGCCGTAAAGTCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: GAYLSPTTCPITIPRAVKSPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...CTTTACGGCTCTGGGGATCGTGATGGGACAGGTGGTCGGACTCAGGTAAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR GCA 90 bp TGTCCCATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTGTTCATGCTCACACCTaGATTGACTCCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: CPITIPRAVKMAELMATAVHAHT*IDSHEQ
Trigger: CTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAAC...AGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGATGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp CCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTTCATGCTCACACCTaGATTGACTCCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: PLRRGRASWYAYPYPLQPVHAHT*IDSHEQ
Trigger: CTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAAC...AGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp AATACTCAATGCATGTGGGGGAGGGGTGCTTACCTGAGTCCGACCACCTGTCCCGTTCATGCTCACACCTaGATTGACTCCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: NTQCMWGRGAYLSPTTCPVHAHT*IDSHEQ
Trigger: CTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAAC...GGGACAGGTGGTCGGACTCAGGTAAGCACCCCTCCCCCACATGCATTGAGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR GCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCAGAGCTCCATGGCACTaGCCAGAACCACGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASRAPWH*PEPRGL
Trigger: CAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCT...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTAGAGCTCCATGGCACTaGCCAGAACCACGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGARAPWH*PEPRGL
Trigger: CAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCT...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAAGCCTCCCAGGTGGCTaGACCTGCGCAGTTCACTCA +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPSLPGG*TCAVHS
Trigger: TGAGTGAACTGCGCAGGTGCAGCCACCTGGGAGGCT...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp AGTGAAGATGCTCCCCCAGCAGGTCATCAGGCTGTACCCACCGATGAGCAGCACTCTGCAATTGCCCCGTaGCTCTTCCTATCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: SEDAPPAGHQAVPTDEQHSAIAP*LFLSKS
Trigger: AGACTTGGATAGGAAGAGGCACGGGGCAATTGCAGA...GTGCTGCTCATCGGTGGGTACAGCCTGATGACCTGCTGGGGGAGCATCTTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCTCAGGAGCAGGATCCTaGCCTGAATCTGCGTCCGAG +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASSGAGS*PESASE
Trigger: CTCGGACGCAGATTCAGGGCAGGATCCTGCTCCTGA...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398356.6
ENST00000611880.4
ENST00000618114.2
ENST00000619254.4
CDS-3UTR CCA 90 bp CCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTTCTCCCCCAGGTACATaGGCTGGATGTTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: PLRRGRASWYAYPYPLQPSPPGT*AGCSCS
Trigger: TGAGCATGAACATCCAGCCCATGTACCTGGGGGAGA...AGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCAGATGGCTGAGCTCATaGCCACAGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASRWLSS*PQLLGA
Trigger: AGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCT...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTAGATGGCTGAGCTCATaGCCACAGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGARWLSS*PQLLGA
Trigger: AGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCT...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp GCTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATGATCATCTCAAATCCCGCAGAGCTCCATaGCACTGCCCAGAACCACGA +
Preference number: 4 (lower is better)
Translates to: AHTCIDSHEQSSQHDHLKSRRAP*HCPEPR
Trigger: TCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGA...TTTGAGATGATCATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR CCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTGCAGGCAGCAGGCCTaGCCATCTGGTCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCICRQQA*PSGQTA
Trigger: AGCTGTTTGACCAGATGGCCAGGCCTGCTGCCTGCA...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp ACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGAGCTCCTTGGAGATCTCTTaGAAGGTCTTGCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: TIPRAVKMAELMATAPRSSLEIS*KVLPLV
Trigger: GACCAAAGGCAAGACCTTCCAAGAGATCTCCAAGGA...GCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR CCA 90 bp AGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAACCACGATCCTTGGAGATCTCTTaGAAGGTCTTGCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: RRTPSHSRRAPWHCPEPRSLEIS*KVLPLV
Trigger: GACCAAAGGCAAGACCTTCCAAGAGATCTCCAAGGA...TCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCGACAGTAGCTGGCTTTaGCTCTGGCCACCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASDSSWL*LWPPLW
Trigger: CCAAAGGGGTGGCCAGAGCCAAAGCCAGCTACTGTC...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp ATCTCAAAGGAGCCTGCTTTGCGGCTGAATCCAAACAGGATTGCTGCTGACACCGATCGCAGGAGGGCGTaGAGCATTCGAAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ISKEPALRLNPNRIAADTDRRRA*SIRKRG
Trigger: GCCCCTCTTTCGAATGCTCCACGCCCTCCTGCGATC...GGTGTCAGCAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436643.5
ENST00000627257.2
CDS-3UTR CCA 90 bp GCTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATGATCATCTCAAAGATCGCAGGAGGGCGTaGAGCATTCGAAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: AHTCIDSHEQSSQHDHLKDRRRA*SIRKRG
Trigger: GCCCCTCTTTCGAATGCTCCACGCCCTCCTGCGATC...TTTGAGATGATCATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436643.5
ENST00000627257.2
CDS-3UTR CCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTCGAGGTCGGGCCTCCTaGTATGCATACCCATACCCA +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGARGRAS*YAYPYP
Trigger: TGGGTATGGGTATGCATACCAGGAGGCCCGACCTCG...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCGTCTCTGTCTCTCGCTaGTCTGACCTCAGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASVSVSR*SDLSRN
Trigger: GTTGCGGCTGAGGTCAGACCAGCGAGAGACAGAGAC...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGCCAGCAAGCGACTCTaGTCGCCGCGCTCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLASKRL*SPRSQV
Trigger: GACTTGGGAGCGCGGCGACCAGAGTCGCTTGCTGGC...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR TCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPSRKDG*AHGHSS
Trigger: GGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCT...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp GCTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATGATCATCTCAAAAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: AHTCIDSHEQSSQHDHLKSRKDG*AHGHSS
Trigger: GGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCT...TTTGAGATGATCATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTCCCGCCTGGGGAAGTTaGGTCTGTGTAATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCIPAWGS*VCVIPW
Trigger: CCAAGGAATTACACAGACTCAACTTCCCCAGGCGGG...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCGGACTAGAGTTCTGTTaGCTGGATAACCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTGLEFC*LDNLQA
Trigger: AGCCTGGAGGTTATCCAGTCAACAGAACTCTAGTCC...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCATCTTCCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPSSFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAAGA...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTAGGGGATCCATTGCGTaGGAGGCAGGTCCGACTTAT +
Preference number: 4 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCIRGSIA*EAGPTY
Trigger: ATAAGTCGGACCTGCCTCTCACGCAATGGATCCCCT...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR TCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCTGGGATTACAGTCATaGGCTGCCACAACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASLGLQS*AATTSL
Trigger: CAGGCTGGTTGTGGCAGCTCATGACTGTAATCCCAG...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp TTCCTATCCAAGTCTGGGTCTGAACATCAAGATCCCTCCCACCCAGGTTGGGACCTGGGATTACAGTCATaGGCTGCCACAACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: FLSKSGSEHQDPSHPGWDLGLQS*AATTSL
Trigger: CAGGCTGGTTGTGGCAGCTCATGACTGTAATCCCAG...GTCCCAACCTGGGTGGGAGGGATCTTGATGTTCAGACCCAGACTTGGATAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTACTCTTGGACTCAAGTaGTCCTGCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGATLGLK*SCCLSL
Trigger: GAGGCTGAGGCAGCAGGATCACTTGAGTCCAAGAGT...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp TCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTGGGGAGACATTTAGGTaGAGAAACGCTTTTACTGGT +
Preference number: 4 (lower is better)
Translates to: SELLRGALPQVHGLDVHAGETFR*RNAFTG
Trigger: ACCAGTAAAAGCGTTTCTTCACCTAAATGTCTCCCC...AGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR GCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCGAAAAGTCCCACCAATaGCGGCAGCGCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASEKSHQ*RQRRWS
Trigger: TGACCATCTGCGCTGCCGGCATTGGTGGGACTTTTC...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CTGGATGTTCATGCTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATGAAAAGTCCCACCAATaGCGGCAGCGCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: LDVHAHTCIDSHEQSSQHEKSHQ*RQRRWS
Trigger: TGACCATCTGCGCTGCCGGCATTGGTGGGACTTTTC...ATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAACATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp TGTCCCATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTTCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: CPITIPRAVKMAELMATASPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...AGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGATGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp ACCTGCAAGCAGTGCTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGTCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: TCKQCSKEASQGIQRHDESPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...CTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR GCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGADGQGT*KQCSKE
Trigger: CTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATC...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTCTCCTCAGGGCCCGATaGTGGAACAGCTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLLLRAR*WNSSHG
Trigger: CCCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAG...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp ATCTCAAAGGAGCCTGCTTTGCGGCTGAATCCAAACAGGATTGCTGCTGACACCAGAGCTCCATGGCACTaGCCAGAACCACGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: ISKEPALRLNPNRIAADTRAPWH*PEPRGL
Trigger: CAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCT...GGTGTCAGCAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR GCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTCAGGGGAAGGAGCTCTaGAGGCACAGGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLQGKEL*RHRATV
Trigger: CACTGTGGCCCTGTGCCTGCAGAGCTCCTTCCCCTG...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAGGCAGGTCCGACTTATaGTGGGGGCACTTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPGRSDL*WGHLEL
Trigger: CAACTCCAAGTGCCCCCAGCATAAGTCGGACCTGCC...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR GCA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGACCTGGAGCCATGTCTaGACACAAAGGGTGCTCAAT +
Preference number: 4 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGTWSHV*TQRVLN
Trigger: ATTGAGCACCCTTTGTGTGCAGACATGGCTCCAGGT...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp GTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATTGTCCAGGCTGGAGTaGAGTGGCTCAATTAGGACT +
Preference number: 4 (lower is better)
Translates to: VSGSPGLGLGWVTDSKWALSRLE*SGSIRT
Trigger: AGTCCTAATTGAGCCACTGCACTCCAGCCTGGACAA...TGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCTTGTCCAGGCTGGAGTaGAGTGGCTCAATTAGGACT +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTLSRLE*SGSIRT
Trigger: AGTCCTAATTGAGCCACTGCACTCCAGCCTGGACAA...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTCCGATGATCGCGTACTaGATCTTCGCTTCCGGCACT +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAPMIAY*IFASGT
Trigger: AGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGG...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCCGATGATCGCGTACTaGATCTTCGCTTCCGGCACT +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASPMIAY*IFASGT
Trigger: AGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGG...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAAAGATGCAGGCCATaGCCAGGTAGAGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASQRCRP*PGRVSR
Trigger: CCTGGACACTCTACCTGGCCATGGCCTGCATCTTTG...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CATGCTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATGATCATCTCACAGGCCAGTGTAGATaGCCCCACAGACACAGACAC +
Preference number: 4 (lower is better)
Translates to: HAHTCIDSHEQSSQHDHLTGQCR*PHRHRH
Trigger: GTGTCTGTGTCTGTGGGGCCATCTACACTGGCCTGT...GAGATGATCATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR CCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTACAGGCCAGTGTAGATaGCCCCACAGACACAGACAC +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGATGQCR*PHRHRH
Trigger: GTGTCTGTGTCTGTGGGGCCATCTACACTGGCCTGT...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTCCTTGGAGATCTCTTaGAAGGTCTTGCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: PSQTRSGLLVCIPIPTTTSLEIS*KVLPLV
Trigger: GACCAAAGGCAAGACCTTCCAAGAGATCTCCAAGGA...GGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp GGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATTCCTTGGAGATCTCTTaGAAGGTCTTGCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: GRKQVSGSPGLGLGWVTDSLEIS*KVLPLV
Trigger: GACCAAAGGCAAGACCTTCCAAGAGATCTCCAAGGA...ATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp AGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTCACATCCTTGGAGATCTCTTaGAAGGTCTTGCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: SSLGALSPRYMGWMFMLTSLEIS*KVLPLV
Trigger: GACCAAAGGCAAGACCTTCCAAGAGATCTCCAAGGA...TGTGAGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR CCA 90 bp CTGCCTTCCGGAACACGGAGGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGTCTGTGTAATTCCTTaGAGATCTCTTGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LPSGTRRRRRRTPSHSRRVCVIP*RSLGRS
Trigger: AGACCTTCCAAGAGATCTCCAAGGAATTACACAGAC...TCTGCGGGAATGACTCGGTGTACGCCTACGCCTCCTCCGTGTTCCGGAAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTTTCTCAGGCCCTGCATaGAGGAATCCAGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAFSGPA*RNPGAG
Trigger: TCCAGCTCCTGGATTCCTCCATGCAGGGCCTGAGAA...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CCA 90 bp CCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACGCTGGTTTCAAACTCTaGCCTCAATTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PLSDEVGPPGMHTHTHYNAGFKL*PQLILP
Trigger: TGGGAGGATCAATTGAGGCCAGAGTTTGAAACCAGC...GTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp AGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAACTATGTTACCTAGGCTaGTTTCAAACTCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RRRRTPSHSRRAPWHCPELCYLG*FQTLAS
Trigger: TGAGGCCAGAGTTTGAAACCAGCCTAGGTAACATAG...TTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CCA 90 bp CAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTCAGTCTGGCATGCAGTaGTGTGATTGTAGCTTACTG +
Preference number: 4 (lower is better)
Translates to: QLRQKAGQWFPRSGTGVGQSGMQ*CDCSLL
Trigger: CAGTAAGCTACAATCACACCACTGCATGCCAGACTG...ACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp AGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAAATCAGCCACCTCACCTaGCCAACCTGTATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RRRRTPSHSRRAPWHCPEISHLT*PTCIFL
Trigger: AAGAAAAATACAGGTTGGCCAGGTGAGGTGGCTGAT...TTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCACGAGGTCGGGCCTCCTaGTATGCATACCCATACCCA +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPRGRAS*YAYPYP
Trigger: TGGGTATGGGTATGCATACCAGGAGGCCCGACCTCG...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCACACACACACACTTTaGTTCAGGTATCCCCGACCT +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTHTHTL*FRYPRP
Trigger: AGGTCGGGGATACCTGAACCAAAGTGTGTGTGTGTG...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp CCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTCACACACACACACTTTaGTTCAGGTATCCCCGACCT +
Preference number: 4 (lower is better)
Translates to: PLRRGRASWYAYPYPLQPHTHTL*FRYPRP
Trigger: AGGTCGGGGATACCTGAACCAAAGTGTGTGTGTGTG...AGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTCCGAAATTCCGGCTCTaGCCCCTCGTCCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLPKFRL*PLVPLL
Trigger: AAGGAGGGGGACGAGGGGCCAGAGCCGGAATTTCGG...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR TCA 90 bp TTCCCCTACTCCCCACGGTGCAGATATGAGCCCAGTGGTCTAATCCAGTCTTGCTCATTGGTGAATTCCTaGATGTGCAAGGTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: FPYSPRCRYEPSGLIQSCSLVNS*MCKVGA
Trigger: TGCCCCGACCTTGCACATTCAGGAATTCACCAATGA...GCAAGACTGGATTAGACCACTGGGCTCATATCTGCACCGTGGGGAGTAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR TCA 90 bp GTAGCTGGCTTTGGCTCTGGCCACCCCTTTGGGACTAGAGTTCTGTTGACTGGATCATTGGTGAATTCCTaGATGTGCAAGGTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: VAGFGSGHPFGTRVLLTGSLVNS*MCKVGA
Trigger: TGCCCCGACCTTGCACATTCAGGAATTCACCAATGA...TCCAGTCAACAGAACTCTAGTCCCAAAGGGGTGGCCAGAGCCAAAGCCAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp GCCCAGTGGTCTAATCCAGTCTTGCTGATCCAGTGCTGGTGCTATGGTTTGAAGATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: AQWSNPVLLIQCWCYGLKISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...CTTCAAACCATAGCACCAGCACTGGATCAGCAAGACTGGATTAGACCACTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR TCA 90 bp TCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTGCTCCAAAGAGGCCTCCCAGAAACAGGATTGCTGCTaGCACCACAAAGATGTTATT +
Preference number: 4 (lower is better)
Translates to: SQRDGQGTCKQCSKEASQKQDCC*HHKDVI
Trigger: AATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTT...CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR TCA 90 bp CAGCTCCCAGTCCCGATGATCGCGTACTGGATCTTCGCTTCCGGCACTCCTGCCAAACAGGATTGCTGCTaGCACCACAAAGATGTTATT +
Preference number: 4 (lower is better)
Translates to: QLPVPMIAYWIFASGTPAKQDCC*HHKDVI
Trigger: AATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTT...GGCAGGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGGGACTGGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCISLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CACAGACACAGACACCAAGGAAAGGGACATAGAGGAAGTGGGACAAGGCCTCCAGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: HRHRHQGKGHRGSGTRPPAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...TGGAGGCCTTGTCCCACTTCCTCTATGTCCCTTTCCTTGGTGTCTGTGTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp ATCTCAAAGGAGCCTGCTTTGCGGCTGAATCCAAACAGGATTGCTGCTGACACCTGCTCACACCTGCATTaGCTCCCACGAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: ISKEPALRLNPNRIAADTCSHLH*LPRAVF
Trigger: GAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCA...GGTGTCAGCAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCATGCTCACACCTGCATTaGCTCCCACGAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPCSHLH*LPRAVF
Trigger: GAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCA...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp CATGATCATCTCAAAGGAGCCTGCTTTGCGGCTGAATCCAAACAGGATTGCTGCAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: HDHLKGACFAAESKQDCCSRKDG*AHGHSS
Trigger: GGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCT...GCAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATGATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp GAAGTGGGACAAGGCCTCCATGATAAAGGGAAATCCCAGGCCGACCAGGATGAGGGACTAGAGTTCTGTTaGCTGGATAACCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: EVGQGLHDKGKSQADQDEGLEFC*LDNLQA
Trigger: AGCCTGGAGGTTATCCAGTCAACAGAACTCTAGTCC...CTCATCCTGGTCGGCCTGGGATTTCCCTTTATCATGGAGGCCTTGTCCCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp GCCCAGTGGTCTAATCCAGTCTTGCTGATCCAGTGCTGGTGCTATGGTTTGAAGAGGGGATCCATTGCGTaGGAGGCAGGTCCGACTTAT +
Preference number: 4 (lower is better)
Translates to: AQWSNPVLLIQCWCYGLKRGSIA*EAGPTY
Trigger: ATAAGTCGGACCTGCCTCTCACGCAATGGATCCCCT...CTTCAAACCATAGCACCAGCACTGGATCAGCAAGACTGGATTAGACCACTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR TCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTACCACGCTCACCATTaGTTGCTAAGCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCIYHAHH*LLSTWS
Trigger: GCTCCAGGTGCTTAGCAATCAATGGTGAGCGTGGTA...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTTACCACGCTCACCATTaGTTGCTAAGCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAYHAHH*LLSTWS
Trigger: GCTCCAGGTGCTTAGCAATCAATGGTGAGCGTGGTA...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCACTGGGATTACAGTCATaGGCTGCCACAACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPLGLQS*AATTSL
Trigger: CAGGCTGGTTGTGGCAGCTCATGACTGTAATCCCAG...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAACTCTTGGACTCAAGTaGTCCTGCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPTLGLK*SCCLSL
Trigger: GAGGCTGAGGCAGCAGGATCACTTGAGTCCAAGAGT...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGCAAATCTGACCAATTaGGGCAGAAAGCAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGANLTN*GRKQVS
Trigger: ACTGACCTGCTTTCTGCCTCAATTGGTCAGATTTGC...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp GAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGCATGTGGGGGAGGGGGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: EETLLLVSPKYSMHVGEGGTCKQ*SKEASQ
Trigger: CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCC...CCCCTCCCCCACATGCATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000405847.5
ENST00000423972.5
ENST00000625546.2
ENST00000628119.2
CDS-3UTR GCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPDGQGT*KQCSKE
Trigger: CTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATC...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp TTCATGCTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATGATCATCGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: FMLTPALTPTSSLPSMIIDGQGT*KQCSKE
Trigger: CTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATC...GATGATCATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp GATTACCACACAACTAACAACCGCCGTGAGCAGCTCGCAGCTCCCAGTCCCGATCATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: DYHTTNNRREQLAAPSPDHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...ATCGGGACTGGGAGCTGCGAGCTGCTCACGGCGGTTGTTAGTTGTGTGGTAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp ACCTGTCCCATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACACATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: TCPITIPRAVKMAELMATHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...TGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGATGGGACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp GTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTCATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: VPQVWDWGGLLIANGHVGHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...ACCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp CTGGGTCTGAACATCAAGATCCCTCCCACCCAGGTTGGGACCAAGAGAGGACAGCATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: LGLNIKIPPTQVGTKRGQHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...CTGTCCTCTCTTGGTCCCAACCTGGGTGGGAGGGATCTTGATGTTCAGACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTGTTCATGCTCACACCTaGATTGACTCCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAVHAHT*IDSHEQ
Trigger: CTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAAC...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCTCGGGCCTCCTGGTATaGATACCCATACCCACTACA +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASSGLLV*IPIPTT
Trigger: TGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGA...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTTCTCCCCCAGGTACATaGGCTGGATGTTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGASPPGT*AGCSCS
Trigger: TGAGCATGAACATCCAGCCCATGTACCTGGGGGAGA...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCTCTCCCCCAGGTACATaGGCTGGATGTTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASSPPGT*AGCSCS
Trigger: TGAGCATGAACATCCAGCCCATGTACCTGGGGGAGA...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CACAGACACAGACACCAAGGAAAGGGACATAGAGGAAGTGGGACAAGGCCTCCATCTCCCCCAGGTACATaGGCTGGATGTTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: HRHRHQGKGHRGSGTRPPSPPGT*AGCSCS
Trigger: TGAGCATGAACATCCAGCCCATGTACCTGGGGGAGA...TGGAGGCCTTGTCCCACTTCCTCTATGTCCCTTTCCTTGGTGTCTGTGTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTTCCCGCAGAGCTCCATaGCACTGCCCAGAACCACGA +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLSRRAP*HCPEPR
Trigger: TCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGA...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCACAAAGATGCAGGCCATaGCCAGGTAGAGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPQRCRP*PGRVSR
Trigger: CCTGGACACTCTACCTGGCCATGGCCTGCATCTTTG...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp AAGGAGCCTGCTTTGCGGCTGAATCCAAACAGGATTGCTGCTGACACCACAAAGCAAAGATGCAGGCCATaGCCAGGTAGAGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KEPALRLNPNRIAADTTKQRCRP*PGRVSR
Trigger: CCTGGACACTCTACCTGGCCATGGCCTGCATCTTTG...CTTTGTGGTGTCAGCAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR CCA 90 bp GAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTCACGTCTGTGTAATTCCTTaGAGATCTCTTGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: ELLRGALPQVHGLDVHAHVCVIP*RSLGRS
Trigger: AGACCTTCCAAGAGATCTCCAAGGAATTACACAGAC...GTGAGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR CCA 90 bp GGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGCTATGTTACCTAGGCTaGTTTCAAACTCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GSPGLGLGWVTDSKWACGLCYLG*FQTLAS
Trigger: TGAGGCCAGAGTTTGAAACCAGCCTAGGTAACATAG...CCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp GTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTCAGTCTGGCATGCAGTaGTGTGATTGTAGCTTACTG +
Preference number: 4 (lower is better)
Translates to: VPQVWDWGGLLIANGHVGQSGMQ*CDCSLL
Trigger: CAGTAAGCTACAATCACACCACTGCATGCCAGACTG...ACCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp CAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTATCAGCCACCTCACCTaGCCAACCTGTATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: QLRQKAGQWFPRSGTGVGISHLT*PTCIFL
Trigger: AAGAAAAATACAGGTTGGCCAGGTGAGGTGGCTGAT...ACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTCTATGTGGCCCAGGCTaGTCTCAAACTTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGALCGPG*SQTSGL
Trigger: GAGACCAGAAGTTTGAGACCAGCCTGGGCCACATAG...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCTATGTGGCCCAGGCTaGTCTCAAACTTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASLCGPG*SQTSGL
Trigger: GAGACCAGAAGTTTGAGACCAGCCTGGGCCACATAG...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp AGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGTTACTGATAGCAAATaGGCATGTGGGTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SGSPGLGLGWVTDSKWACVTDSK*ACGCLG
Trigger: CCCAAGGCACCCACATGCCCATTTGCTATCAGTAAC...ACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCTTTGCTACAGTCTCTaGACTAAATGTCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTLCYSL*TKCLRV
Trigger: GACCCGCAGACATTTAGTCCAGAGACTGTAGCAAAG...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
3UTR CAA 72 bp TGGGCCCGCCTGGGGAAGTTGAGTCTGTGTAATTCCTaGGAGATCTCTTGGAAGGTCTTGCCTTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: WARLGKLSLCNS*EISWKVLPLVS
Trigger: TGAGACCAAAGGCAAGACCTTCCAAGAGATCTCCAAGGAATTACACAGACTCAACTTCCCCAGGCGGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp GAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGCATGTGGGGGAGGGGGACTTCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: EETLLLVSPKYSMHVGEGDFFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGAAGTC...CCCCTCCCCCACATGCATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR TCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPSLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp ATCTCAAAGGAGCCTGCTTTGCGGCTGAATCCAAACAGGATTGCTGCTGACACCAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: ISKEPALRLNPNRIAADTSLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...GGTGTCAGCAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp ACAGACACCAAGGAAAGGGACATAGAGGAAGTGGGACAAGGCCTCCATGATAAAAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: TDTKERDIEEVGQGLHDKSRKDG*AHGHSS
Trigger: GGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCT...TTTATCATGGAGGCCTTGTCCCACTTCCTCTATGTCCCTTTCCTTGGTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp ACAGACACCAAGGAAAGGGACATAGAGGAAGTGGGACAAGGCCTCCATGATAAAAGCTCCCAGTCCCGATaGTCGCGTACTGGATCTTCG +
Preference number: 4 (lower is better)
Translates to: TDTKERDIEEVGQGLHDKSSQSR*SRTGSS
Trigger: CGAAGATCCAGTACGCGATCATCGGGACTGGGAGCT...TTTATCATGGAGGCCTTGTCCCACTTCCTCTATGTCCCTTTCCTTGGTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTGGCTGTACCCACCGATaGGCAGCACGCGCCGACCCA +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVGCTHR*AARADP
Trigger: TGGGTCGGCGCGTGCTGCTCATCGGTGGGTACAGCC...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp CGTGAATTGGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCATCTTCCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: RELAAEMWIEDSMPSCKASSFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAAGA...TGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCCAATTCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR TCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGCTGCCTCAGCCTCCTaGGTAGCTAGAGCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLAASAS*VARAVS
Trigger: GCTAACAGCTCTAGCTACTCAGGAGGCTGAGGCAGC...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp CCAGTCTTGCTGATCCAGTGCTGGTGCTATGGTTTGAAGGTTTGTGTCTCTTCCCCCACGGTGCAGATATaGGCCCAGTGGTCTAATCCA +
Preference number: 4 (lower is better)
Translates to: PVLLIQCWCYGLKVCVSSPTVQI*AQWSNP
Trigger: TGGATTAGACCACTGGGCTCATATCTGCACCGTGGG...GGAAGAGACACAAACCTTCAAACCATAGCACCAGCACTGGATCAGCAAGACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR GCA 90 bp GCTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATGATCATCTCAAATCAGGAGCAGGATCCTaGCCTGAATCAGTCTTCGGA +
Preference number: 4 (lower is better)
Translates to: AHTCIDSHEQSSQHDHLKSGAGS*PESVFG
Trigger: TCCGAAGACTGATTCAGGGCAGGATCCTGCTCCTGA...TTTGAGATGATCATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR GCA 90 bp CCAGTCTTGCTGATCCAGTGCTGGTGCTATGGTTTGAAGGTTTGTGTCTCTTCCGAAAAGTCCCACCAATaGCGGCAGCGCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: PVLLIQCWCYGLKVCVSSEKSHQ*RQRRWS
Trigger: TGACCATCTGCGCTGCCGGCATTGGTGGGACTTTTC...GGAAGAGACACAAACCTTCAAACCATAGCACCAGCACTGGATCAGCAAGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR GCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTTCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGASPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CACAGACACAGACACCAAGGAAAGGGACATAGAGGAAGTGGGACAAGGCCTCCATCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: HRHRHQGKGHRGSGTRPPSPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...TGGAGGCCTTGTCCCACTTCCTCTATGTCCCTTTCCTTGGTGTCTGTGTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR GCA 90 bp CATGATCATCTCAAAGGAGCCTGCTTTGCGGCTGAATCCAAACAGGATTGCTGCGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: HDHLKGACFAAESKQDCCDGQGT*KQCSKE
Trigger: CTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATC...GCAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATGATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp AGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTCATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: SGSPGLGLGWVTDSKWACHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...ACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp TTCATGCTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATGATCATCGTTCATGCTCACACCTaGATTGACTCCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: FMLTPALTPTSSLPSMIIVHAHT*IDSHEQ
Trigger: CTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAAC...GATGATCATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp CTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATGATCATCTCAAAGGTTCATGCTCACACCTaGATTGACTCCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: LTPALTPTSSLPSMIISKVHAHT*IDSHEQ
Trigger: CTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAAC...CTTTGAGATGATCATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp CTCCTAATACGTGCAACAACATTCATGAATCCCAAAAACTTTATCTGGAGCCAAGCGCCCCGCAGACCATaGAGGCAGCAGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LLIRATTFMNPKNFIWSQAPRRP*RQQAWP
Trigger: TGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGC...TTGGCTCCAGATAAAGTTTTTGGGATTCATGAATGTTGTTGCACGTATTAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR GCA 90 bp TCTAATCCAGTCTTGCTGATCCAGTGCTGGTGCTATGGTTTGAAGGTTTGTGTCGAGCGCTCTCATCTGTaGGTCCTGGGCAGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: SNPVLLIQCWCYGLKVCVERSHL*VLGRAR
Trigger: TCTCGCTCTGCCCAGGACGCACAGATGAGAGCGCTC...GACACAAACCTTCAAACCATAGCACCAGCACTGGATCAGCAAGACTGGATTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR GCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTACCTGGAGCCATGTCTaGACACAAAGGGTGCTCAAT +
Preference number: 4 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCITWSHV*TQRVLN
Trigger: ATTGAGCACCCTTTGTGTGCAGACATGGCTCCAGGT...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp GGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGGTGATTGTAGCTTACTaGTACCTTGAACTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GSPGLGLGWVTDSKWACGVIVAY*YLELLD
Trigger: GTCCAAGAGTTCAAGGTAGCAGTAAGCTACAATCAC...CCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTTGTCCAGGCTGGAGTaGAGTGGCTCAATTAGGACT +
Preference number: 4 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCILSRLE*SGSIRT
Trigger: AGTCCTAATTGAGCCACTGCACTCCAGCCTGGACAA...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp GGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGCTCATGTGGGGGAGGGGTaGTTACCTGAGTCCGACCAC +
Preference number: 4 (lower is better)
Translates to: GSRDVDRGFDAFMQSNNAHVGEG*LPESDH
Trigger: GTGGTCGGACTCAGGTAAGCACCCCTCCCCCACATG...AGCATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR GCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTATTCGCCCTCGCAAGTaGCAGCAAGCGACTCTGGTC +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLIRPRK*QQATLV
Trigger: GACCAGAGTCGCTTGCTGGCACTTGCGAGGGCGAAT...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGTCAAACAGCTCTGTaGCCAGGATCCCCGTCACTC +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLGQTAL*PGSPSL
Trigger: GAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACC...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTGCAGGCCTGGCCATCTaGTCAAACAGCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFAGLAI*SNSSVA
Trigger: GGCCACAGAGCTGTTTGACCAGATGGCCAGGCCTGC...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTTGCAGGCAGCAGGCCTaGCCATCTGGTCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLCRQQA*PSGQTA
Trigger: AGCTGTTTGACCAGATGGCCAGGCCTGCTGCCTGCA...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAGGAAGGTCTTGCCTTTaGTCTCAGGAAGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPGRSCL*SQEGTG
Trigger: GCCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCC...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp AAAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGTCTGTGTAATTCCTTaGAGATCTCTTGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: KGKSQADQDEHDPHERPAVCVIP*RSLGRS
Trigger: AGACCTTCCAAGAGATCTCCAAGGAATTACACAGAC...TGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp ACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACGTCTGTGTAATTCCTTaGAGATCTCTTGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: TPLSDEVGPPGMHTHTHYVCVIP*RSLGRS
Trigger: AGACCTTCCAAGAGATCTCCAAGGAATTACACAGAC...GTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGCAGAGCGAGAGACTTaGCGGAATGCGGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLAERET*RNAGRR
Trigger: TCTCCTACCCGCATTCCGCCAAGTCTCTCGCTCTGC...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000618502.4
ENST00000619254.4
CDS-3UTR CCA 90 bp TCTCAGGAAGGAACAGGCCAGTGTAGATGGCCCCACAGACACAGACACCAAGGAGCTGGTTTCAAACTCTaGCCTCAATTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SQEGTGQCRWPHRHRHQGAGFKL*PQLILP
Trigger: TGGGAGGATCAATTGAGGCCAGAGTTTGAAACCAGC...TCCTTGGTGTCTGTGTCTGTGGGGCCATCTACACTGGCCTGTTCCTTCCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CCA 90 bp GTAGCTGGCTTTGGCTCTGGCCACCCCTTTGGGACTAGAGTTCTGTTGACTGGACAGTCTGGCATGCAGTaGTGTGATTGTAGCTTACTG +
Preference number: 4 (lower is better)
Translates to: VAGFGSGHPFGTRVLLTGQSGMQ*CDCSLL
Trigger: CAGTAAGCTACAATCACACCACTGCATGCCAGACTG...TCCAGTCAACAGAACTCTAGTCCCAAAGGGGTGGCCAGAGCCAAAGCCAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CCA 90 bp CTGGGTCTGAACATCAAGATCCCTCCCACCCAGGTTGGGACCAAGAGAGGACAGATCAGCCACCTCACCTaGCCAACCTGTATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LGLNIKIPPTQVGTKRGQISHLT*PTCIFL
Trigger: AAGAAAAATACAGGTTGGCCAGGTGAGGTGGCTGAT...CTGTCCTCTCTTGGTCCCAACCTGGGTGGGAGGGATCTTGATGTTCAGACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCACTATGTGGCCCAGGCTaGTCTCAAACTTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPLCGPG*SQTSGL
Trigger: GAGACCAGAAGTTTGAGACCAGCCTGGGCCACATAG...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTGTTACTGATAGCAAATaGGCATGTGGGTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAVTDSK*ACGCLG
Trigger: CCCAAGGCACCCACATGCCCATTTGCTATCAGTAAC...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp CTGGATGTTCATGCTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATAATACTCAATGCATGTaGGGGAGGGGTGCTTACCTG +
Preference number: 4 (lower is better)
Translates to: LDVHAHTCIDSHEQSSQHNTQCM*GRGAYL
Trigger: CAGGTAAGCACCCCTCCCCCACATGCATTGAGTATT...ATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAACATCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR CCA 90 bp TTCCCCTACTCCCCACGGTGCAGATATGAGCCCAGTGGTCTAATCCAGTCTTGCCCAGTGCTGGTGCTATaGTTTGAAGGTTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: FPYSPRCRYEPSGLIQSCPVLVL*FEGLCL
Trigger: GAGACACAAACCTTCAAACCATAGCACCAGCACTGG...GCAAGACTGGATTAGACCACTGGGCTCATATCTGCACCGTGGGGAGTAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR TCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp GAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGCATGTGGGGGAGGGGATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: EETLLLVSPKYSMHVGEGISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...CCCCTCCCCCACATGCATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000405847.5
ENST00000423972.5
ENST00000625546.2
ENST00000628119.2
CDS-3UTR TCA 90 bp ATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGAAACAGGATTGCTGCTaGCACCACAAAGATGTTATT +
Preference number: 4 (lower is better)
Translates to: ITIPRAVKMAELMATAPRKQDCC*HHKDVI
Trigger: AATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTT...CCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp CCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACAAACAGGATTGCTGCTaGCACCACAAAGATGTTATT +
Preference number: 4 (lower is better)
Translates to: PLSDEVGPPGMHTHTHYNKQDCC*HHKDVI
Trigger: AATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTT...GTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTAAACAGGATTGCTGCTaGCACCACAAAGATGTTATT +
Preference number: 4 (lower is better)
Translates to: QLRQKAGQWFPRSGTGVGKQDCC*HHKDVI
Trigger: AATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTT...ACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCAAACAGGATTGCTGCTaGCACCACAAAGATGTTATT +
Preference number: 4 (lower is better)
Translates to: PSQTRSGLLVCIPIPTTTKQDCC*HHKDVI
Trigger: AATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTT...GGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CTGGGGAAGTTGAGTCTGTGTAATTCCTTGGAGATCTCTTGGAAGGTCTTGCCTTGCTCACACCTGCATTaGCTCCCACGAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LGKLSLCNSLEISWKVLPCSHLH*LPRAVF
Trigger: GAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCA...AGGCAAGACCTTCCAAGAGATCTCCAAGGAATTACACAGACTCAACTTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFSRKDG*AHGHSS
Trigger: GGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCT...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTAGCTCCCAGTCCCGATaGTCGCGTACTGGATCTTCG +
Preference number: 4 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFSSQSR*SRTGSS
Trigger: CGAAGATCCAGTACGCGATCATCGGGACTGGGAGCT...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTGGCACAGGGCCACAGTaGAGATGCTCCCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVGTGPQ*RCSPSR
Trigger: CCTGCTGGGGGAGCATCTTCACTGTGGCCCTGTGCC...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTCCCGCCTGGGGAAGTTaGGTCTGTGTAATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLPAWGS*VCVIPW
Trigger: CCAAGGAATTACACAGACTCAACTTCCCCAGGCGGG...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp TTCATGCTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATGATCATCGGACTAGAGTTCTGTTaGCTGGATAACCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FMLTPALTPTSSLPSMIIGLEFC*LDNLQA
Trigger: AGCCTGGAGGTTATCCAGTCAACAGAACTCTAGTCC...GATGATCATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR TCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAGGACTAGAGTTCTGTTaGCTGGATAACCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPGLEFC*LDNLQA
Trigger: AGCCTGGAGGTTATCCAGTCAACAGAACTCTAGTCC...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp CAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTAACCACAGAGTCCACTaGACCGGATTAATCTTTTAT +
Preference number: 4 (lower is better)
Translates to: QLRQKAGQWFPRSGTGVGNHRVH*TGLIFY
Trigger: ATAAAAGATTAATCCGGTTCAGTGGACTCTGTGGTT...ACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR TCA 90 bp ACAGACACCAAGGAAAGGGACATAGAGGAAGTGGGACAAGGCCTCCATGATAAACTGGGATTACAGTCATaGGCTGCCACAACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TDTKERDIEEVGQGLHDKLGLQS*AATTSL
Trigger: CAGGCTGGTTGTGGCAGCTCATGACTGTAATCCCAG...TTTATCATGGAGGCCTTGTCCCACTTCCTCTATGTCCCTTTCCTTGGTGTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCGCAAATCTGACCAATTaGGGCAGAAAGCAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASANLTN*GRKQVS
Trigger: ACTGACCTGCTTTCTGCCTCAATTGGTCAGATTTGC...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp ACCTGCAAGCAGTGCTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGACCTCAATGTGTTCATaGACCTGGAAGCTCATCAAA +
Preference number: 4 (lower is better)
Translates to: TCKQCSKEASQGIQRHDETSMCS*TWKLIK
Trigger: TTTGATGAGCTTCCAGGTTCATGAACACATTGAGGT...CTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR TCA 90 bp TTCCTTCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTGCTCCAAAGAGGCCTGCCATGTCTCATTGGTaGATTCCTGAATGTGATTTA +
Preference number: 4 (lower is better)
Translates to: FLPSVMAKGPASSAPKRPAMSHW*IPECDL
Trigger: TAAATCACATTCAGGAATTCACCAATGAGACATGGC...AGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR GCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGAAAAGTCCCACCAATaGCGGCAGCGCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLEKSHQ*RQRRWS
Trigger: TGACCATCTGCGCTGCCGGCATTGGTGGGACTTTTC...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CGTGAATTGGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: RELAAEMWIEDSMPSCKADGQGT*KQCSKE
Trigger: CTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATC...TGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCCAATTCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR GCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTGCGCCCCGCAGACCATaGAGGCAGCAGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHAAPRRP*RQQAWP
Trigger: TGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGC...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CTGGATGTTCATGCTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATTCTCTTGGAAGGTCTTaGCTTTGGTCTCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LDVHAHTCIDSHEQSSQHSLGRS*LWSQEG
Trigger: TCCTTCCTGAGACCAAAGGCAAGACCTTCCAAGAGA...ATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAACATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR GCA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGATTGTAGCTTACTaGTACCTTGAACTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGVIVAY*YLELLD
Trigger: GTCCAAGAGTTCAAGGTAGCAGTAAGCTACAATCAC...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp TTCCCCTACTCCCCACGGTGCAGATATGAGCCCAGTGGTCTAATCCAGTCTTGCCTGATCCAGTGCTGGTaGTATGGTTTGAAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: FPYSPRCRYEPSGLIQSCLIQCW*YGLKVC
Trigger: ACAAACCTTCAAACCATAGCACCAGCACTGGATCAG...GCAAGACTGGATTAGACCACTGGGCTCATATCTGCACCGTGGGGAGTAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR GCA 90 bp AATCCAGTCTTGCTGATCCAGTGCTGGTGCTATGGTTTGAAGGTTTGTGTCTCTCCCTACTCCCCACGGTaGAGATATGAGCCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: NPVLLIQCWCYGLKVCVSPYSPR*RYEPSG
Trigger: ACCACTGGGCTCATATCTGCACCGTGGGGAGTAGGG...AGAGACACAAACCTTCAAACCATAGCACCAGCACTGGATCAGCAAGACTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR GCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTCCAAGCCCTTGGTTGTaGACATCTATGCACGCCCCA +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLPSPWL*TSMHAP
Trigger: TGGGGCGTGCATAGATGTGCACAACCAAGGGCTTGG...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCACTCAGGGCCCGATGCTaGAACAGCTCCCATGGGCGC +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSLRARC*NSSHGR
Trigger: GCGCCCATGGGAGCTGTTCCAGCATCGGGCCCTGAG...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTCAAAGATGCAGGCCATaGCCAGGTAGAGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLQRCRP*PGRVSR
Trigger: CCTGGACACTCTACCTGGCCATGGCCTGCATCTTTG...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTACAGGCCAGTGTAGATaGCCCCACAGACACAGACAC +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLTGQCR*PHRHRH
Trigger: GTGTCTGTGTCTGTGGGGCCATCTACACTGGCCTGT...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTCCTTGGAGATCTCTTaGAAGGTCTTGCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCISLEIS*KVLPLV
Trigger: GACCAAAGGCAAGACCTTCCAAGAGATCTCCAAGGA...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCTCCTTGGAGATCTCTTaGAAGGTCTTGCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASSLEIS*KVLPLV
Trigger: GACCAAAGGCAAGACCTTCCAAGAGATCTCCAAGGA...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CTGGGTCTGAACATCAAGATCCCTCCCACCCAGGTTGGGACCAAGAGAGGACAGGTCTGTGTAATTCCTTaGAGATCTCTTGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LGLNIKIPPTQVGTKRGQVCVIP*RSLGRS
Trigger: AGACCTTCCAAGAGATCTCCAAGGAATTACACAGAC...CTGTCCTCTCTTGGTCCCAACCTGGGTGGGAGGGATCTTGATGTTCAGACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTGCAGAGCGAGAGACTTaGCGGAATGCGGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFAERET*RNAGRR
Trigger: TCTCCTACCCGCATTCCGCCAAGTCTCTCGCTCTGC...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTGCTGGTTTCAAACTCTaGCCTCAATTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAAGFKL*PQLILP
Trigger: TGGGAGGATCAATTGAGGCCAGAGTTTGAAACCAGC...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTCAGTCTGGCATGCAGTaGTGTGATTGTAGCTTACTG +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAQSGMQ*CDCSLL
Trigger: CAGTAAGCTACAATCACACCACTGCATGCCAGACTG...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCTTTGCTACAGTCTCTaGACTAAATGTCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASLCYSL*TKCLRV
Trigger: GACCCGCAGACATTTAGTCCAGAGACTGTAGCAAAG...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
3UTR CAA 72 bp AGTCTTCCCAGCATGATCATCTCAAAGGAGCCTGCTTaGCGGCTGAATCCAAACAGGATTGCTGCTGACACC +
Preference number: 4 (lower is better)
Translates to: SLPSMIISKEPA*RLNPNRIAADT
Trigger: GGTGTCAGCAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATGATCATGCTGGGAAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp TGTCCCATCACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTAAACAGGATTGCTGCTaGCACCACAAAGATGTTATT +
Preference number: 4 (lower is better)
Translates to: CPITIPRAVKMAELMATAKQDCC*HHKDVI
Trigger: AATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTT...AGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGTGATGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp ACCTGCAAGCAGTGCTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGAAACAGGATTGCTGCTaGCACCACAAAGATGTTATT +
Preference number: 4 (lower is better)
Translates to: TCKQCSKEASQGIQRHDEKQDCC*HHKDVI
Trigger: AATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTT...CTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR TCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLSLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp CGTGAATTGGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RELAAEMWIEDSMPSCKAAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...TGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCCAATTCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR TCA 90 bp GAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGCATGTGGGGGAGGGGGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: EETLLLVSPKYSMHVGEGAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...CCCCTCCCCCACATGCATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000405847.5
ENST00000423972.5
ENST00000625546.2
ENST00000628119.2
CDS-3UTR TCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTTGCTCACACCTGCATTaGCTCCCACGAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFCSHLH*LPRAVF
Trigger: GAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCA...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCAATGACTTCAGATTCTaGAAAAAGGCAAATCTGACC +
Preference number: 4 (lower is better)
Translates to: PSQTRSGLLVCIPIPTTTNDFRF*KKANLT
Trigger: GGTCAGATTTGCCTTTTTTCAGAATCTGAAGTCATT...GGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp GGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGAATGACTTCAGATTCTaGAAAAAGGCAAATCTGACC +
Preference number: 4 (lower is better)
Translates to: GSPGLGLGWVTDSKWACGNDFRF*KKANLT
Trigger: GGTCAGATTTGCCTTTTTTCAGAATCTGAAGTCATT...CCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTGAAAAGTCCCACCAATaGCGGCAGCGCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFEKSHQ*RQRRWS
Trigger: TGACCATCTGCGCTGCCGGCATTGGTGGGACTTTTC...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp GGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGCTGAAAAGTCCCACCAATaGCGGCAGCGCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: GSRDVDRGFDAFMQSNNAEKSHQ*RQRRWS
Trigger: TGACCATCTGCGCTGCCGGCATTGGTGGGACTTTTC...AGCATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR GCA 90 bp CATGATCATCTCAAAGGAGCCTGCTTTGCGGCTGAATCCAAACAGGATTGCTGCTCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: HDHLKGACFAAESKQDCCSPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...GCAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATGATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR GCA 90 bp TCTAATCCAGTCTTGCTGATCCAGTGCTGGTGCTATGGTTTGAAGGTTTGTGTCGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: SNPVLLIQCWCYGLKVCVDGQGT*KQCSKE
Trigger: CTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATC...GACACAAACCTTCAAACCATAGCACCAGCACTGGATCAGCAAGACTGGATTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR GCA 90 bp GGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGCTGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: GSRDVDRGFDAFMQSNNADGQGT*KQCSKE
Trigger: CTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATC...AGCATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR GCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFDGQGT*KQCSKE
Trigger: CTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATC...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp CGTGAATTGGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAGTTCATGCTCACACCTaGATTGACTCCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: RELAAEMWIEDSMPSCKAVHAHT*IDSHEQ
Trigger: CTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAAC...TGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCCAATTCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR GCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGTTCATGCTCACACCTaGATTGACTCCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLVHAHT*IDSHEQ
Trigger: CTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAAC...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTCTCCTCAGGGCCCGATaGTGGAACAGCTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVLLRAR*WNSSHG
Trigger: CCCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAG...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCACTCCTCAGGGCCCGATaGTGGAACAGCTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSLLRAR*WNSSHG
Trigger: CCCATGGGAGCTGTTCCAGCATCGGGCCCTGAGGAG...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCACGCTTCCGGCACTCCTaGCTTCCGGAACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSRFRHS*LPEHGG
Trigger: TCCTCCGTGTTCCGGAAGGCAGGAGTGCCGGAAGCG...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTCGCTTCCGGCACTCCTaGCTTCCGGAACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVRFRHS*LPEHGG
Trigger: TCCTCCGTGTTCCGGAAGGCAGGAGTGCCGGAAGCG...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCACAGGGGAAGGAGCTCTaGAGGCACAGGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSQGKEL*RHRATV
Trigger: CACTGTGGCCCTGTGCCTGCAGAGCTCCTTCCCCTG...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCATCTCTTGGAAGGTCTTaGCTTTGGTCTCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPSLGRS*LWSQEG
Trigger: TCCTTCCTGAGACCAAAGGCAAGACCTTCCAAGAGA...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp GGAATACTACTCAGCAATACAAAGGAGTCTCTCCTAATACGTGCAACAACATTCCGCCAGGGGATCCATTaGGTGAGAGGCAGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: GILLSNTKESLLIRATTFRQGIH*VRGRSD
Trigger: GTCGGACCTGCCTCTCACGCAATGGATCCCCTGGCG...GAATGTTGTTGCACGTATTAGGAGAGACTCCTTTGTATTGCTGAGTAGTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR GCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGAACCGGTCTCGGGTTaGCGCCAGGGGATCCATTGC +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSEPVSG*RQGIHC
Trigger: GCAATGGATCCCCTGGCGGCAACCCGAGACCGGTTC...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000618502.4
ENST00000619254.4
CDS-3UTR CCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTTCTCCCCCAGGTACATaGGCTGGATGTTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLSPPGT*AGCSCS
Trigger: TGAGCATGAACATCCAGCCCATGTACCTGGGGGAGA...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CGTGAATTGGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCATCTCCCCCAGGTACATaGGCTGGATGTTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: RELAAEMWIEDSMPSCKASPPGT*AGCSCS
Trigger: TGAGCATGAACATCCAGCCCATGTACCTGGGGGAGA...TGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCCAATTCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR CCA 90 bp GAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGCATGTGGGGGAGGGGTCTCCCCCAGGTACATaGGCTGGATGTTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: EETLLLVSPKYSMHVGEGSPPGT*AGCSCS
Trigger: TGAGCATGAACATCCAGCCCATGTACCTGGGGGAGA...CCCCTCCCCCACATGCATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000405847.5
ENST00000423972.5
ENST00000625546.2
ENST00000628119.2
CDS-3UTR CCA 90 bp CTGGGGAAGTTGAGTCTGTGTAATTCCTTGGAGATCTCTTGGAAGGTCTTGCCTTCTCCCCCAGGTACATaGGCTGGATGTTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: LGKLSLCNSLEISWKVLPSPPGT*AGCSCS
Trigger: TGAGCATGAACATCCAGCCCATGTACCTGGGGGAGA...AGGCAAGACCTTCCAAGAGATCTCCAAGGAATTACACAGACTCAACTTCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGAAGGTCTTGCCTTTaGTCTCAGGAAGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLGRSCL*SQEGTG
Trigger: GCCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCC...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAGCTGGTTTCAAACTCTaGCCTCAATTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPAGFKL*PQLILP
Trigger: TGGGAGGATCAATTGAGGCCAGAGTTTGAAACCAGC...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTATCAGCCACCTCACCTaGCCAACCTGTATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAISHLT*PTCIFL
Trigger: AAGAAAAATACAGGTTGGCCAGGTGAGGTGGCTGAT...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCATCAGCCACCTCACCTaGCCAACCTGTATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASISHLT*PTCIFL
Trigger: AAGAAAAATACAGGTTGGCCAGGTGAGGTGGCTGAT...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTTCACCAACAGGTAGATaGATAAATAAATCATGGTCT +
Preference number: 4 (lower is better)
Translates to: PLPSQTRSGLLVCIPIPTSPTGR*INKSWS
Trigger: AGACCATGATTTATTTATCCATCTACCTGTTGGTGA...AGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTCCCTCCCACCCAGGTTaGGACCAAGAGAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVPSHPG*DQERTG
Trigger: CCCTGTCCTCTCTTGGTCCCAACCTGGGTGGGAGGG...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTTCATTGGTGAATTCCTaGATGTGCAAGGTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLSLVNS*MCKVGA
Trigger: TGCCCCGACCTTGCACATTCAGGAATTCACCAATGA...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp TCTCAGGAAGGAACAGGCCAGTGTAGATGGCCCCACAGACACAGACACCAAGGAAAACAGGATTGCTGCTaGCACCACAAAGATGTTATT +
Preference number: 4 (lower is better)
Translates to: SQEGTGQCRWPHRHRHQGKQDCC*HHKDVI
Trigger: AATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTT...TCCTTGGTGTCTGTGTCTGTGGGGCCATCTACACTGGCCTGTTCCTTCCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR TCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTTTCGAAAGAGGGGCCTaGGCGGAGGTCTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVFERGA*AEVLLS
Trigger: GGACAGCAAGACCTCCGCTCAGGCCCCTCTTTCGAA...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp CATTTAGGTGAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGCATGTGGGAGGGGTGCTTACCTaGGTCCGACCACCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: HLGEETLLLVSPKYSMHVGGVLT*VRPPVP
Trigger: TGGGACAGGTGGTCGGACTCAGGTAAGCACCCCTCC...CACATGCATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTCACCTAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405847.5
ENST00000423972.5
ENST00000625546.2
ENST00000628119.2
CDS-3UTR GCA 90 bp TCTAATCCAGTCTTGCTGATCCAGTGCTGGTGCTATGGTTTGAAGGTTTGTGTCTCAGGAGCAGGATCCTaGCCTGAATCAGTCTTCGGA +
Preference number: 4 (lower is better)
Translates to: SNPVLLIQCWCYGLKVCVSGAGS*PESVFG
Trigger: TCCGAAGACTGATTCAGGGCAGGATCCTGCTCCTGA...GACACAAACCTTCAAACCATAGCACCAGCACTGGATCAGCAAGACTGGATTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR GCA 90 bp AGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGCTTTAGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SRDVDRGFDAFMQSNNALGTCKQ*SKEASQ
Trigger: CTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCC...TAAAGCATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR GCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTGTTCATGCTCACACCTaGATTGACTCCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFVHAHT*IDSHEQ
Trigger: CTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAAC...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp CTCCTAATACGTGCAACAACATTCATGAATCCCAAAAACTTTATCTGGAGCCAACAGGGGAAGGAGCTCTaGAGGCACAGGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: LLIRATTFMNPKNFIWSQQGKEL*RHRATV
Trigger: CACTGTGGCCCTGTGCCTGCAGAGCTCCTTCCCCTG...TTGGCTCCAGATAAAGTTTTTGGGATTCATGAATGTTGTTGCACGTATTAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR GCA 90 bp GGAATACTACTCAGCAATACAAAGGAGTCTCTCCTAATACGTGCAACAACATTCGAGCGCTCTCATCTGTaGGTCCTGGGCAGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: GILLSNTKESLLIRATTFERSHL*VLGRAR
Trigger: TCTCGCTCTGCCCAGGACGCACAGATGAGAGCGCTC...GAATGTTGTTGCACGTATTAGGAGAGACTCCTTTGTATTGCTGAGTAGTATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR GCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGAGCGCTCTCATCTGTaGGTCCTGGGCAGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSERSHL*VLGRAR
Trigger: TCTCGCTCTGCCCAGGACGCACAGATGAGAGCGCTC...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000618502.4
ENST00000619254.4
CDS-3UTR GCA 90 bp AGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGCTTTAGAGCGCTCTCATCTGTaGGTCCTGGGCAGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: SRDVDRGFDAFMQSNNALERSHL*VLGRAR
Trigger: TCTCGCTCTGCCCAGGACGCACAGATGAGAGCGCTC...TAAAGCATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR GCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTACCTGGAGCCATGTCTaGACACAAAGGGTGCTCAAT +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLTWSHV*TQRVLN
Trigger: ATTGAGCACCCTTTGTGTGCAGACATGGCTCCAGGT...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCGTGATTGTAGCTTACTaGTACCTTGAACTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: PRLVSNFWSQSNLPILASVIVAY*YLELLD
Trigger: GTCCAAGAGTTCAAGGTAGCAGTAAGCTACAATCAC...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTGTGATTGTAGCTTACTaGTACCTTGAACTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAVIVAY*YLELLD
Trigger: GTCCAAGAGTTCAAGGTAGCAGTAAGCTACAATCAC...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAAGAGGACAGGGCCACTaGCCCACCTCATCCCTAGCA +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSRGQGH*PTSSLA
Trigger: TGCTAGGGATGAGGTGGGGCAGTGGCCCTGTCCTCT...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR GCA 90 bp GGGAGACATTTAGGTGAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGTCCTCCATCCGCCTCTaGCGCAGCACTGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: GRHLGEETLLLVSPKYSMSSIRL*RSTEAE
Trigger: TTCAGCCTCAGTGCTGCGGCAGAGGCGGATGGAGGA...CATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTCACCTAAATGTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR GCA 90 bp AGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGCTTTACATGTGGGGGAGGGGTaGTTACCTGAGTCCGACCAC +
Preference number: 4 (lower is better)
Translates to: SRDVDRGFDAFMQSNNALHVGEG*LPESDH
Trigger: GTGGTCGGACTCAGGTAAGCACCCCTCCCCCACATG...TAAAGCATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR GCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTTCTGGACTAAATGTCTaGGGGTCTCTGTCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLSGLNV*GSLSLA
Trigger: AGCGAGAGACAGAGACCCGCAGACATTTAGTCCAGA...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR GCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTCTCGTCCCCCTCCTTTaGTACAGTCTCTGGACTAAA +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLLVPLL*YSLWTK
Trigger: TTTAGTCCAGAGACTGTAGCAAAGGAGGGGGACGAG...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR GCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTCCCCAAGCTCATCTCTaGAGGCCGGAAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVPQAHL*RPEGSS
Trigger: AGAGCTCCCTTCCGGCCTGCAGAGATGAGCTTGGGG...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGCAGGCCTGGCCATCTaGTCAAACAGCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSAGLAI*SNSSVA
Trigger: GGCCACAGAGCTGTTTGACCAGATGGCCAGGCCTGC...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGATCGCAGGAGGGCGTaGAGCATTCGAAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSDRRRA*SIRKRG
Trigger: GCCCCTCTTTCGAATGCTCCACGCCCTCCTGCGATC...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAATCAGCCACCTCACCTaGCCAACCTGTATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPISHLT*PTCIFL
Trigger: AAGAAAAATACAGGTTGGCCAGGTGAGGTGGCTGAT...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGTGGATAAATAAATCATaGTCTAACCACAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGWINKS*SNHRGE
Trigger: TTCCCCTCTGTGGTTAGACCATGATTTATTTATCCA...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CCA 90 bp CGTGAATTGGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAAATACTCAATGCATGTaGGGGAGGGGTGCTTACCTG +
Preference number: 4 (lower is better)
Translates to: RELAAEMWIEDSMPSCKANTQCM*GRGAYL
Trigger: CAGGTAAGCACCCCTCCCCCACATGCATTGAGTATT...TGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCCAATTCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR TCA 90 bp CTGGATGTTCATGCTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATAAACAGGATTGCTGCTaGCACCACAAAGATGTTATT +
Preference number: 4 (lower is better)
Translates to: LDVHAHTCIDSHEQSSQHKQDCC*HHKDVI
Trigger: AATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTT...ATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAACATCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp AGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGCTTTAAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SRDVDRGFDAFMQSNNALSRKDG*AHGHSS
Trigger: GGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCT...TAAAGCATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR TCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTAGCCGTAAAGATGGCTaGGCTCATGGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVSRKDG*AHGHSS
Trigger: GGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCT...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAAGCTCCCAGTCCCGATaGTCGCGTACTGGATCTTCG +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSSSQSR*SRTGSS
Trigger: CGAAGATCCAGTACGCGATCATCGGGACTGGGAGCT...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp GGGAGACATTTAGGTGAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGTCTTCCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: GRHLGEETLLLVSPKYSMSSFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAAGA...CATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTCACCTAAATGTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR TCA 90 bp GGAATACTACTCAGCAATACAAAGGAGTCTCTCCTAATACGTGCAACAACATTCGGGGGCACTTGGAGTTaGGGAACCACAGAGTCCACT +
Preference number: 4 (lower is better)
Translates to: GILLSNTKESLLIRATTFGGTWS*GTTEST
Trigger: AGTGGACTCTGTGGTTCCTCAACTCCAAGTGCCCCC...GAATGTTGTTGCACGTATTAGGAGAGACTCCTTTGTATTGCTGAGTAGTATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR TCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTCCGCAATCCCTCATCTaGAACGCCTGGTCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVPQSLI*NAWSGQ
Trigger: TTGCCCAGACCAGGCGTTTCAGATGAGGGATTGCGG...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp AATCCAGTCTTGCTGATCCAGTGCTGGTGCTATGGTTTGAAGGTTTGTGTCTCTCTAATCCAGTCTTGCTaGTCCAGTGCTGGTGCTATG +
Preference number: 4 (lower is better)
Translates to: NPVLLIQCWCYGLKVCVSLIQSC*SSAGAM
Trigger: CATAGCACCAGCACTGGATCAGCAAGACTGGATTAG...AGAGACACAAACCTTCAAACCATAGCACCAGCACTGGATCAGCAAGACTGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR TCA 90 bp TTTCCCAAGTGTATACACTCACCAAAACTATACTTAGAACTCAAAACTCGCCAATGTCTCTCGCTGGTCTaGCCTCAGCCGCAACCCTGC +
Preference number: 4 (lower is better)
Translates to: FPKCIHSPKLYLELKTRQCLSLV*PQPQPC
Trigger: GCAGGGTTGCGGCTGAGGTCAGACCAGCGAGAGACA...TTGGCGAGTTTTGAGTTCTAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR GCA 90 bp ATTGGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGAAAAGTCCCACCAATaGCGGCAGCGCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: IGSRDVDRGFDAFMQSNNEKSHQ*RQRRWS
Trigger: TGACCATCTGCGCTGCCGGCATTGGTGGGACTTTTC...ATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR GCA 90 bp GGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGCTTCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: GSRDVDRGFDAFMQSNNASPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...AGCATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR GCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTCATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTAGAGCTCCATGGCACTaGCCAGAACCACGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVRAPWH*PEPRGL
Trigger: CAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCT...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTTCTCTTGGAAGGTCTTaGCTTTGGTCTCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLSLGRS*LWSQEG
Trigger: TCCTTCCTGAGACCAAAGGCAAGACCTTCCAAGAGA...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CATTTAGGTGAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGCATGTGGAGCGCTCTCATCTGTaGGTCCTGGGCAGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: HLGEETLLLVSPKYSMHVERSHL*VLGRAR
Trigger: TCTCGCTCTGCCCAGGACGCACAGATGAGAGCGCTC...CACATGCATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTCACCTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR GCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTACCTGGAGCCATGTCTaGACACAAAGGGTGCTCAAT +
Preference number: 4 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFTWSHV*TQRVLN
Trigger: ATTGAGCACCCTTTGTGTGCAGACATGGCTCCAGGT...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp CATTTAGGTGAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGCATGTGCATGTGGGGGAGGGGTaGTTACCTGAGTCCGACCAC +
Preference number: 4 (lower is better)
Translates to: HLGEETLLLVSPKYSMHVHVGEG*LPESDH
Trigger: GTGGTCGGACTCAGGTAAGCACCCCTCCCCCACATG...CACATGCATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTCACCTAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000405847.5
ENST00000423972.5
ENST00000625546.2
ENST00000628119.2
CDS-3UTR GCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTTCTGGACTAAATGTCTaGGGGTCTCTGTCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFSGLNV*GSLSLA
Trigger: AGCGAGAGACAGAGACCCGCAGACATTTAGTCCAGA...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTAGATGGCTGAGCTCATaGCCACAGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVRWLSS*PQLLGA
Trigger: AGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCT...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGGTCAAACAGCTCTGTaGCCAGGATCCCCGTCACTC +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSGQTAL*PGSPSL
Trigger: GAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACC...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTTGCAGGCAGCAGGCCTaGCCATCTGGTCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVCRQQA*PSGQTA
Trigger: AGCTGTTTGACCAGATGGCCAGGCCTGCTGCCTGCA...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTTCCTTGGAGATCTCTTaGAAGGTCTTGCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLSLEIS*KVLPLV
Trigger: GACCAAAGGCAAGACCTTCCAAGAGATCTCCAAGGA...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAGTCTGTGTAATTCCTTaGAGATCTCTTGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPVCVIP*RSLGRS
Trigger: AGACCTTCCAAGAGATCTCCAAGGAATTACACAGAC...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGACAGTAGCTGGCTTTaGCTCTGGCCACCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSDSSWL*LWPPLW
Trigger: CCAAAGGGGTGGCCAGAGCCAAAGCCAGCTACTGTC...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGCAGAGCGAGAGACTTaGCGGAATGCGGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSAERET*RNAGRR
Trigger: TCTCCTACCCGCATTCCGCCAAGTCTCTCGCTCTGC...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000618502.4
ENST00000619254.4
CDS-3UTR CCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGCTACCTTGAACTCTTaGACTCAAGTGATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLATLNS*TQVILL
Trigger: CAGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGC...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGTCACCAACAGGTAGATaGATAAATAAATCATGGTCT +
Preference number: 4 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGSPTGR*INKSWS
Trigger: AGACCATGATTTATTTATCCATCTACCTGTTGGTGA...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CCA 90 bp GGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGCTAATACTCAATGCATGTaGGGGAGGGGTGCTTACCTG +
Preference number: 4 (lower is better)
Translates to: GSRDVDRGFDAFMQSNNANTQCM*GRGAYL
Trigger: CAGGTAAGCACCCCTCCCCCACATGCATTGAGTATT...AGCATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR CCA 90 bp CGTGAATTGGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCATTGGCAGCAGAGATGTaGATAGAGGATTCGATGCCT +
Preference number: 4 (lower is better)
Translates to: RELAAEMWIEDSMPSCKALAAEM*IEDSMP
Trigger: AGGCATCGAATCCTCTATCCACATCTCTGCTGCCAA...TGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCCAATTCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR CCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTCCGAAATTCCGGCTCTaGCCCCTCGTCCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHAPKFRL*PLVPLL
Trigger: AAGGAGGGGGACGAGGGGCCAGAGCCGGAATTTCGG...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR TCA 90 bp GGAATACTACTCAGCAATACAAAGGAGTCTCTCCTAATACGTGCAACAACATTCATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GILLSNTKESLLIRATTFISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...GAATGTTGTTGCACGTATTAGGAGAGACTCCTTTGTATTGCTGAGTAGTATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR TCA 90 bp ATCTCAAAGGAGCCTGCTTTGCGGCTGAATCCAAACAGGATTGCTGCTGACACCAAACAGGATTGCTGCTaGCACCACAAAGATGTTATT +
Preference number: 4 (lower is better)
Translates to: ISKEPALRLNPNRIAADTKQDCC*HHKDVI
Trigger: AATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTT...GGTGTCAGCAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR TCA 90 bp ATTGGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: IGSRDVDRGFDAFMQSNNSLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...ATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR TCA 90 bp GGAATACTACTCAGCAATACAAAGGAGTCTCTCCTAATACGTGCAACAACATTCTGCTCACACCTGCATTaGCTCCCACGAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GILLSNTKESLLIRATTFCSHLH*LPRAVF
Trigger: GAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCA...GAATGTTGTTGCACGTATTAGGAGAGACTCCTTTGTATTGCTGAGTAGTATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR TCA 90 bp AGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGCTTTATGCTCACACCTGCATTaGCTCCCACGAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SRDVDRGFDAFMQSNNALCSHLH*LPRAVF
Trigger: GAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCA...TAAAGCATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR TCA 90 bp GGGAGACATTTAGGTGAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGTGCTCACACCTGCATTaGCTCCCACGAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GRHLGEETLLLVSPKYSMCSHLH*LPRAVF
Trigger: GAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCA...CATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTCACCTAAATGTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405847.5
ENST00000423972.5
ENST00000625546.2
ENST00000628119.2
CDS-3UTR TCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCACCCGCCTGGGGAAGTTaGGTCTGTGTAATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSPAWGS*VCVIPW
Trigger: CCAAGGAATTACACAGACTCAACTTCCCCAGGCGGG...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTCCCGCCTGGGGAAGTTaGGTCTGTGTAATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVPAWGS*VCVIPW
Trigger: CCAAGGAATTACACAGACTCAACTTCCCCAGGCGGG...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp ATCTTGATCACGGTGGTGTTTCCCAAGTGTATACACTCACCAAAACTATACTTATCTTCCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: ILITVVFPKCIHSPKLYLSSFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAAGA...TAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAACACCACCGTGATCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTTGTCTCCACAGTCAATaGGGAGGTAGCGCGGGCTTT +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVCLHSQ*GGSAGF
Trigger: AAAGCCCGCGCTACCTCCTCATTGACTGTGGAGACA...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAAACCACAGAGTCCACTaGACCGGATTAATCTTTTAT +
Preference number: 4 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPNHRVH*TGLIFY
Trigger: ATAAAAGATTAATCCGGTTCAGTGGACTCTGTGGTT...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR TCA 90 bp ATCTTGATCACGGTGGTGTTTCCCAAGTGTATACACTCACCAAAACTATACTTAGGGGGCACTTGGAGTTaGGGAACCACAGAGTCCACT +
Preference number: 4 (lower is better)
Translates to: ILITVVFPKCIHSPKLYLGGTWS*GTTEST
Trigger: AGTGGACTCTGTGGTTCCTCAACTCCAAGTGCCCCC...TAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAACACCACCGTGATCAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR TCA 90 bp TCCCAAAAACTTTATCTGGAGCCAAGCCAGACACAAATGTGTACATACAGTACGTACCACGCTCACCATTaGTTGCTAAGCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SQKLYLEPSQTQMCTYSTYHAHH*LLSTWS
Trigger: GCTCCAGGTGCTTAGCAATCAATGGTGAGCGTGGTA...CGTACTGTATGTACACATTTGTGTCTGGCTTGGCTCCAGATAAAGTTTTTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR TCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTCTGGGATTACAGTCATaGGCTGCCACAACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVLGLQS*AATTSL
Trigger: CAGGCTGGTTGTGGCAGCTCATGACTGTAATCCCAG...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTGCAAATCTGACCAATTaGGGCAGAAAGCAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFANLTN*GRKQVS
Trigger: ACTGACCTGCTTTCTGCCTCAATTGGTCAGATTTGC...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTAATGACTTCAGATTCTaGAAAAAGGCAAATCTGACC +
Preference number: 4 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGANDFRF*KKANLT
Trigger: GGTCAGATTTGCCTTTTTTCAGAATCTGAAGTCATT...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTCAGCAGTTTTATTCATaGTGGCCAAGAATTAGAAAC +
Preference number: 4 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCIQQFYS*WPRIRN
Trigger: GTTTCTAATTCTTGGCCATCATGAATAAAACTGCTG...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR TCA 90 bp AATCCAGTCTTGCTGATCCAGTGCTGGTGCTATGGTTTGAAGGTTTGTGTCTCTGCTGGTGCTATGGTTTaGAGGTTTGTGTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: NPVLLIQCWCYGLKVCVSAGAMV*RFVSLP
Trigger: TGGAAGAGACACAAACCTTCAAACCATAGCACCAGC...AGAGACACAAACCTTCAAACCATAGCACCAGCACTGGATCAGCAAGACTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR GCA 90 bp ATTGGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATTCAGGAGCAGGATCCTaGCCTGAATCAGTCTTCGGA +
Preference number: 4 (lower is better)
Translates to: IGSRDVDRGFDAFMQSNNSGAGS*PESVFG
Trigger: TCCGAAGACTGATTCAGGGCAGGATCCTGCTCCTGA...ATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR GCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTGAAAAGTCCCACCAATaGCGGCAGCGCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVEKSHQ*RQRRWS
Trigger: TGACCATCTGCGCTGCCGGCATTGGTGGGACTTTTC...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp CTGATCCAGTGCTGGTGCTATGGTTTGAAGGTTTGTGTCTCTTCCAAAATTCAGTCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: LIQCWCYGLKVCVSSKIQSPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...CTGAATTTTGGAAGAGACACAAACCTTCAAACCATAGCACCAGCACTGGATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR GCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSDGQGT*KQCSKE
Trigger: CTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATC...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp GGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGCTCATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: GSRDVDRGFDAFMQSNNAHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...AGCATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR GCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTTCTCTTGGAAGGTCTTaGCTTTGGTCTCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFSLGRS*LWSQEG
Trigger: TCCTTCCTGAGACCAAAGGCAAGACCTTCCAAGAGA...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp ATCTTGATCACGGTGGTGTTTCCCAAGTGTATACACTCACCAAAACTATACTTAGGTTGTGCACATCTATaGACGCCCCACCTACACCCC +
Preference number: 4 (lower is better)
Translates to: ILITVVFPKCIHSPKLYLGCAHL*TPHLHP
Trigger: GGGGTGTAGGTGGGGCGTGCATAGATGTGCACAACC...TAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAACACCACCGTGATCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp CATTTAGGTGAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGCATGTGAGATGGCTGAGCTCATaGCCACAGCTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: HLGEETLLLVSPKYSMHVRWLSS*PQLLGA
Trigger: AGCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCT...CACATGCATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTCACCTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405847.5
ENST00000423972.5
ENST00000625546.2
ENST00000628119.2
CDS-3UTR CCA 90 bp AAGCCAGACACAAATGTGTACATACAGTACGGAATGACTTCAGATTCTGAAAAATCCCGCAGAGCTCCATaGCACTGCCCAGAACCACGA +
Preference number: 4 (lower is better)
Translates to: KPDTNVYIQYGMTSDSEKSRRAP*HCPEPR
Trigger: TCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGA...TTTTTCAGAATCTGAAGTCATTCCGTACTGTATGTACACATTTGTGTCTGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTTCCCGCAGAGCTCCATaGCACTGCCCAGAACCACGA +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHASRRAP*HCPEPR
Trigger: TCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGA...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTCCGATGATCGCGTACTaGATCTTCGCTTCCGGCACT +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVPMIAY*IFASGT
Trigger: AGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGG...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CTCCTAATACGTGCAACAACATTCATGAATCCCAAAAACTTTATCTGGAGCCAAGGTCAAACAGCTCTGTaGCCAGGATCCCCGTCACTC +
Preference number: 4 (lower is better)
Translates to: LLIRATTFMNPKNFIWSQGQTAL*PGSPSL
Trigger: GAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACC...TTGGCTCCAGATAAAGTTTTTGGGATTCATGAATGTTGTTGCACGTATTAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTGCAGGCCTGGCCATCTaGTCAAACAGCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHAAGLAI*SNSSVA
Trigger: GGCCACAGAGCTGTTTGACCAGATGGCCAGGCCTGC...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAACAGGCCAGTGTAGATaGCCCCACAGACACAGACAC +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSTGQCR*PHRHRH
Trigger: GTGTCTGTGTCTGTGGGGCCATCTACACTGGCCTGT...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTAGGTCCGACTTATGCTaGGGGCACTTGGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVRSDLC*GHLELR
Trigger: CCTCAACTCCAAGTGCCCCCAGCATAAGTCGGACCT...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CCA 90 bp TCCCAAAAACTTTATCTGGAGCCAAGCCAGACACAAATGTGTACATACAGTACGCTATGTGGCCCAGGCTaGTCTCAAACTTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SQKLYLEPSQTQMCTYSTLCGPG*SQTSGL
Trigger: GAGACCAGAAGTTTGAGACCAGCCTGGGCCACATAG...CGTACTGTATGTACACATTTGTGTCTGGCTTGGCTCCAGATAAAGTTTTTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CCA 90 bp CTCCTAATACGTGCAACAACATTCATGAATCCCAAAAACTTTATCTGGAGCCAACGAGGTCGGGCCTCCTaGTATGCATACCCATACCCA +
Preference number: 4 (lower is better)
Translates to: LLIRATTFMNPKNFIWSQRGRAS*YAYPYP
Trigger: TGGGTATGGGTATGCATACCAGGAGGCCCGACCTCG...TTGGCTCCAGATAAAGTTTTTGGGATTCATGAATGTTGTTGCACGTATTAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CCA 90 bp CAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTGGATAAATAAATCATaGTCTAACCACAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: QTRSGLLVCIPIPTTTCIWINKS*SNHRGE
Trigger: TTCCCCTCTGTGGTTAGACCATGATTTATTTATCCA...AATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CCA 90 bp GTAGCTGGCTTTGGCTCTGGCCACCCCTTTGGGACTAGAGTTCTGTTGACTGGATTTTTCTGGAATGACTaGAACACGTTTGTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: VAGFGSGHPFGTRVLLTGFFWND*NTFVFE
Trigger: TTCAAAGACAAACGTGTTCCAGTCATTCCAGAAAAA...TCCAGTCAACAGAACTCTAGTCCCAAAGGGGTGGCCAGAGCCAAAGCCAGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp CATTTAGGTGAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGCATGTGATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: HLGEETLLLVSPKYSMHVISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...CACATGCATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTCACCTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405847.5
ENST00000423972.5
ENST00000625546.2
ENST00000628119.2
CDS-3UTR TCA 90 bp AGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGCTTTAGCAGTCTTCCCAGCATaGTCATCTCAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SRDVDRGFDAFMQSNNALAVFPA*SSQRSL
Trigger: CAGGCTCCTTTGAGATGATCATGCTGGGAAGACTGC...TAAAGCATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR TCA 90 bp TTTCCCAAGTGTATACACTCACCAAAACTATACTTAGAACTCAAAACTCGCCAATCTTCCTTCCCAGCGTaGTGGCCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: FPKCIHSPKLYLELKTRQSSFPA*WPRDLQ
Trigger: TTGCAGGTCCCTTGGCCATCACGCTGGGAAGGAAGA...TTGGCGAGTTTTGAGTTCTAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp ATCTTGATCACGGTGGTGTTTCCCAAGTGTATACACTCACCAAAACTATACTTATGTCTCCACAGTCAATaGGGAGGTAGCGCGGGCTTT +
Preference number: 4 (lower is better)
Translates to: ILITVVFPKCIHSPKLYLCLHSQ*GGSAGF
Trigger: AAAGCCCGCGCTACCTCCTCATTGACTGTGGAGACA...TAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAACACCACCGTGATCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTTACCACGCTCACCATTaGTTGCTAAGCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVYHAHH*LLSTWS
Trigger: GCTCCAGGTGCTTAGCAATCAATGGTGAGCGTGGTA...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp ATCTTGATCACGGTGGTGTTTCCCAAGTGTATACACTCACCAAAACTATACTTACTGGGATTACAGTCATaGGCTGCCACAACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ILITVVFPKCIHSPKLYLLGLQS*AATTSL
Trigger: CAGGCTGGTTGTGGCAGCTCATGACTGTAATCCCAG...TAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAACACCACCGTGATCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTGCTGCCTCAGCCTCCTaGGTAGCTAGAGCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHAAASAS*VARAVS
Trigger: GCTAACAGCTCTAGCTACTCAGGAGGCTGAGGCAGC...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp CTCCTAATACGTGCAACAACATTCATGAATCCCAAAAACTTTATCTGGAGCCAAACTCTTGGACTCAAGTaGTCCTGCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LLIRATTFMNPKNFIWSQTLGLK*SCCLSL
Trigger: GAGGCTGAGGCAGCAGGATCACTTGAGTCCAAGAGT...TTGGCTCCAGATAAAGTTTTTGGGATTCATGAATGTTGTTGCACGTATTAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR GCA 90 bp ATCTTGATCACGGTGGTGTTTCCCAAGTGTATACACTCACCAAAACTATACTTAGAAAAGTCCCACCAATaGCGGCAGCGCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: ILITVVFPKCIHSPKLYLEKSHQ*RQRRWS
Trigger: TGACCATCTGCGCTGCCGGCATTGGTGGGACTTTTC...TAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAACACCACCGTGATCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp TCCCAAAAACTTTATCTGGAGCCAAGCCAGACACAAATGTGTACATACAGTACGTCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: SQKLYLEPSQTQMCTYSTSPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...CGTACTGTATGTACACATTTGTGTCTGGCTTGGCTCCAGATAAAGTTTTTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR GCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTGTTCATGCTCACACCTaGATTGACTCCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVVHAHT*IDSHEQ
Trigger: CTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAAC...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp AGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGCTTTAGTTCATGCTCACACCTaGATTGACTCCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: SRDVDRGFDAFMQSNNALVHAHT*IDSHEQ
Trigger: CTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAAC...TAAAGCATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR GCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGTGATTGTAGCTTACTaGTACCTTGAACTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLVIVAY*YLELLD
Trigger: GTCCAAGAGTTCAAGGTAGCAGTAAGCTACAATCAC...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTTCAGGAGCAGGATCCTaGCCTGAATCTGCGTCCGAG +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHASGAGS*PESASE
Trigger: CTCGGACGCAGATTCAGGGCAGGATCCTGCTCCTGA...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398356.6
ENST00000611880.4
ENST00000618114.2
ENST00000619254.4
CDS-3UTR GCA 90 bp TTTCCCAAGTGTATACACTCACCAAAACTATACTTAGAACTCAAAACTCGCCAAGGTTGTGCACATCTATaGACGCCCCACCTACACCCC +
Preference number: 4 (lower is better)
Translates to: FPKCIHSPKLYLELKTRQGCAHL*TPHLHP
Trigger: GGGGTGTAGGTGGGGCGTGCATAGATGTGCACAACC...TTGGCGAGTTTTGAGTTCTAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTTGCAGGCAGCAGGCCTaGCCATCTGGTCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHACRQQA*PSGQTA
Trigger: AGCTGTTTGACCAGATGGCCAGGCCTGCTGCCTGCA...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGTCTGTGTAATTCCTTaGAGATCTCTTGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLVCVIP*RSLGRS
Trigger: AGACCTTCCAAGAGATCTCCAAGGAATTACACAGAC...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTCTATGTTACCTAGGCTaGTTTCAAACTCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFLCYLG*FQTLAS
Trigger: TGAGGCCAGAGTTTGAAACCAGCCTAGGTAACATAG...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTCTATGTGGCCCAGGCTaGTCTCAAACTTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVLCGPG*SQTSGL
Trigger: GAGACCAGAAGTTTGAGACCAGCCTGGGCCACATAG...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTCCCAAAAACTTTATCTaGAGCCAAGCCAGACACAAA +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLPKNFI*SQARHK
Trigger: TTTGTGTCTGGCTTGGCTCCAGATAAAGTTTTTGGG...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CCA 90 bp TTCCTATCCAAGTCTGGGTCTGAACATCAAGATCCCTCCCACCCAGGTTGGGACTTTTTCTGGAATGACTaGAACACGTTTGTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: FLSKSGSEHQDPSHPGWDFFWND*NTFVFE
Trigger: TTCAAAGACAAACGTGTTCCAGTCATTCCAGAAAAA...GTCCCAACCTGGGTGGGAGGGATCTTGATGTTCAGACCCAGACTTGGATAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTATAAGCAGGACTAGGTaGTCGGGCAGTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHAISRTR*SGSGSP
Trigger: TGGAGAGCCACTGCCCGATCACCTAGTCCTGCTTAT...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp ATCTTGATCACGGTGGTGTTTCCCAAGTGTATACACTCACCAAAACTATACTTAAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: ILITVVFPKCIHSPKLYLSLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...TAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAACACCACCGTGATCAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTTGCTCACACCTGCATTaGCTCCCACGAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHACSHLH*LPRAVF
Trigger: GAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCA...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp AAGCCAGACACAAATGTGTACATACAGTACGGAATGACTTCAGATTCTGAAAAACCCGCCTGGGGAAGTTaGGTCTGTGTAATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KPDTNVYIQYGMTSDSEKPAWGS*VCVIPW
Trigger: CCAAGGAATTACACAGACTCAACTTCCCCAGGCGGG...TTTTTCAGAATCTGAAGTCATTCCGTACTGTATGTACACATTTGTGTCTGGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR TCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTGGACTAGAGTTCTGTTaGCTGGATAACCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVGLEFC*LDNLQA
Trigger: AGCCTGGAGGTTATCCAGTCAACAGAACTCTAGTCC...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTACTCTTGGACTCAAGTaGTCCTGCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHATLGLK*SCCLSL
Trigger: GAGGCTGAGGCAGCAGGATCACTTGAGTCCAAGAGT...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp GGGAGACATTTAGGTGAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGTCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: GRHLGEETLLLVSPKYSMSPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...CATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTCACCTAAATGTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405847.5
ENST00000423972.5
ENST00000625546.2
ENST00000628119.2
CDS-3UTR GCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHADGQGT*KQCSKE
Trigger: CTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATC...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp AGATGGATAAATAAATCATGGTCTAACCACAGAGGGGAATACTACTCAGCAATATCAATTAGGACTCACTaGAGCCTCGACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RWINKSWSNHRGEYYSAISIRTH*SLDLPG
Trigger: GCCTGGGAGGTCGAGGCTGCAGTGAGTCCTAATTGA...TATTGCTGAGTAGTATTCCCCTCTGTGGTTAGACCATGATTTATTTATCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR GCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCATTGTCCAGGCTGGAGTaGAGTGGCTCAATTAGGACT +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSLSRLE*SGSIRT
Trigger: AGTCCTAATTGAGCCACTGCACTCCAGCCTGGACAA...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTCAGGGAGTCTGCAATTaGCCCGTGCCTCTTCCTATC +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHAQGVCN*PVPLPI
Trigger: GATAGGAAGAGGCACGGGGCAATTGCAGACTCCCTG...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CCA 90 bp CTCCTAATACGTGCAACAACATTCATGAATCCCAAAAACTTTATCTGGAGCCAACTATGTGGCCCAGGCTaGTCTCAAACTTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LLIRATTFMNPKNFIWSQLCGPG*SQTSGL
Trigger: GAGACCAGAAGTTTGAGACCAGCCTGGGCCACATAG...TTGGCTCCAGATAAAGTTTTTGGGATTCATGAATGTTGTTGCACGTATTAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR TCA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTAAACAGGATTGCTGCTaGCACCACAAAGATGTTATT +
Preference number: 4 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFKQDCC*HHKDVI
Trigger: AATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTT...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTAGCCTGCTTTGCGGCTaGATCCAAACAGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHASLLCG*IQTGLL
Trigger: CAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCT...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTCAGCAGTTTTATTCATaGTGGCCAAGAATTAGAAAC +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLQQFYS*WPRIRN
Trigger: GTTTCTAATTCTTGGCCATCATGAATAAAACTGCTG...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR GCA 90 bp GGGAGACATTTAGGTGAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGCATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: GRHLGEETLLLVSPKYSMHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...CATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTCACCTAAATGTCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405847.5
ENST00000423972.5
ENST00000625546.2
ENST00000628119.2
CDS-3UTR GCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTCATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTGTTCATGCTCACACCTaGATTGACTCCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHAVHAHT*IDSHEQ
Trigger: CTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAAC...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTTCGGGCCTCCTGGTATaGATACCCATACCCACTACA +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHASGLLV*IPIPTT
Trigger: TGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGA...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTGGAAGGTCTTGCCTTTaGTCTCAGGAAGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHAGRSCL*SQEGTG
Trigger: GCCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCC...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTTCCTTGGAGATCTCTTaGAAGGTCTTGCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVSLEIS*KVLPLV
Trigger: GACCAAAGGCAAGACCTTCCAAGAGATCTCCAAGGA...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTGCTGGTTTCAAACTCTaGCCTCAATTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVAGFKL*PQLILP
Trigger: TGGGAGGATCAATTGAGGCCAGAGTTTGAAACCAGC...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGCTGGTTTCAAACTCTaGCCTCAATTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSAGFKL*PQLILP
Trigger: TGGGAGGATCAATTGAGGCCAGAGTTTGAAACCAGC...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTGCTACCTTGAACTCTTaGACTCAAGTGATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVATLNS*TQVILL
Trigger: CAGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGC...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTCAGTCTGGCATGCAGTaGTGTGATTGTAGCTTACTG +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVQSGMQ*CDCSLL
Trigger: CAGTAAGCTACAATCACACCACTGCATGCCAGACTG...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp AGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGCTTTATTGGCAGCAGAGATGTaGATAGAGGATTCGATGCCT +
Preference number: 4 (lower is better)
Translates to: SRDVDRGFDAFMQSNNALLAAEM*IEDSMP
Trigger: AGGCATCGAATCCTCTATCCACATCTCTGCTGCCAA...TAAAGCATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR TCA 90 bp AAGCCAGACACAAATGTGTACATACAGTACGGAATGACTTCAGATTCTGAAAAATCATTGGTGAATTCCTaGATGTGCAAGGTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: KPDTNVYIQYGMTSDSEKSLVNS*MCKVGA
Trigger: TGCCCCGACCTTGCACATTCAGGAATTCACCAATGA...TTTTTCAGAATCTGAAGTCATTCCGTACTGTATGTACACATTTGTGTCTGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR TCA 90 bp TTTCCCAAGTGTATACACTCACCAAAACTATACTTAGAACTCAAAACTCGCCAAGGACTAGAGTTCTGTTaGCTGGATAACCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FPKCIHSPKLYLELKTRQGLEFC*LDNLQA
Trigger: AGCCTGGAGGTTATCCAGTCAACAGAACTCTAGTCC...TTGGCGAGTTTTGAGTTCTAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR TCA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGAACACGTTTGTCTTTaGAAGCCCAAATCTTCACCC +
Preference number: 4 (lower is better)
Translates to: SHELPQPACNYVVTDFLSEHVCL*KPKSSP
Trigger: GGGTGAAGATTTGGGCTTTCAAAGACAAACGTGTTC...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTGAACACGTTTGTCTTTaGAAGCCCAAATCTTCACCC +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVEHVCL*KPKSSP
Trigger: GGGTGAAGATTTGGGCTTTCAAAGACAAACGTGTTC...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR TCA 90 bp AGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGCTTTAGGGGAGACATTTAGGTaGAGAAACGCTTTTACTGGT +
Preference number: 4 (lower is better)
Translates to: SRDVDRGFDAFMQSNNALGETFR*RNAFTG
Trigger: ACCAGTAAAAGCGTTTCTTCACCTAAATGTCTCCCC...TAAAGCATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR TCA 90 bp GGGAGACATTTAGGTGAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGGGGGAGACATTTAGGTaGAGAAACGCTTTTACTGGT +
Preference number: 4 (lower is better)
Translates to: GRHLGEETLLLVSPKYSMGETFR*RNAFTG
Trigger: ACCAGTAAAAGCGTTTCTTCACCTAAATGTCTCCCC...CATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTCACCTAAATGTCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000405847.5
ENST00000423972.5
ENST00000625546.2
ENST00000628119.2
CDS-3UTR GCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTTCTCCAGTACGCGCCTaGCATGTCTCATTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHASPVRA*HVSLVN
Trigger: ATTCACCAATGAGACATGGCAGGCGCGTACTGGAGA...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR GCA 90 bp ATCTTGATCACGGTGGTGTTTCCCAAGTGTATACACTCACCAAAACTATACTTATCTCTTGGAAGGTCTTaGCTTTGGTCTCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: ILITVVFPKCIHSPKLYLSLGRS*LWSQEG
Trigger: TCCTTCCTGAGACCAAAGGCAAGACCTTCCAAGAGA...TAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAACACCACCGTGATCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp TTTCCCAAGTGTATACACTCACCAAAACTATACTTAGAACTCAAAACTCGCCAACTCGTCCCCCTCCTTTaGTACAGTCTCTGGACTAAA +
Preference number: 4 (lower is better)
Translates to: FPKCIHSPKLYLELKTRQLVPLL*YSLWTK
Trigger: TTTAGTCCAGAGACTGTAGCAAAGGAGGGGGACGAG...TTGGCGAGTTTTGAGTTCTAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CCA 90 bp TCCCAAAAACTTTATCTGGAGCCAAGCCAGACACAAATGTGTACATACAGTACGGTCTGTGTAATTCCTTaGAGATCTCTTGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SQKLYLEPSQTQMCTYSTVCVIP*RSLGRS
Trigger: AGACCTTCCAAGAGATCTCCAAGGAATTACACAGAC...CGTACTGTATGTACACATTTGTGTCTGGCTTGGCTCCAGATAAAGTTTTTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CCA 90 bp ATCTTGATCACGGTGGTGTTTCCCAAGTGTATACACTCACCAAAACTATACTTAGCTACCTTGAACTCTTaGACTCAAGTGATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ILITVVFPKCIHSPKLYLATLNS*TQVILL
Trigger: CAGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGC...TAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAACACCACCGTGATCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp AAGCCAGACACAAATGTGTACATACAGTACGGAATGACTTCAGATTCTGAAAAAGTTACTGATAGCAAATaGGCATGTGGGTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: KPDTNVYIQYGMTSDSEKVTDSK*ACGCLG
Trigger: CCCAAGGCACCCACATGCCCATTTGCTATCAGTAAC...TTTTTCAGAATCTGAAGTCATTCCGTACTGTATGTACACATTTGTGTCTGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTGTTACTGATAGCAAATaGGCATGTGGGTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHAVTDSK*ACGCLG
Trigger: CCCAAGGCACCCACATGCCCATTTGCTATCAGTAAC...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR GCA 90 bp AGATGGATAAATAAATCATGGTCTAACCACAGAGGGGAATACTACTCAGCAATACATCTCAAAGGAGCCTaGTTTGCGGCTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: RWINKSWSNHRGEYYSAIHLKGA*FAAESK
Trigger: TTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATG...TATTGCTGAGTAGTATTCCCCTCTGTGGTTAGACCATGATTTATTTATCCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTGCTACCTTGAACTCTTaGACTCAAGTGATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHAATLNS*TQVILL
Trigger: CAGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGC...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CCA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTCAGTCTGGCATGCAGTaGTGTGATTGTAGCTTACTG +
Preference number: 4 (lower is better)
Translates to: MLLLIFCQLITFSLEYHAQSGMQ*CDCSLL
Trigger: CAGTAAGCTACAATCACACCACTGCATGCCAGACTG...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTAAACAGGATTGCTGCTaGCACCACAAAGATGTTATT +
Preference number: 4 (lower is better)
Translates to: HELPQPACNYVVTDFLSVKQDCC*HHKDVI
Trigger: AATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTT...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR TCA 90 bp GGGAGACATTTAGGTGAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGAAACAGGATTGCTGCTaGCACCACAAAGATGTTATT +
Preference number: 4 (lower is better)
Translates to: GRHLGEETLLLVSPKYSMKQDCC*HHKDVI
Trigger: AATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTT...CATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTCACCTAAATGTCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405847.5
ENST00000423972.5
ENST00000625546.2
ENST00000628119.2
CDS-3UTR TCA 90 bp AGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGCTTTAAAACAGGATTGCTGCTaGCACCACAAAGATGTTATT +
Preference number: 4 (lower is better)
Translates to: SRDVDRGFDAFMQSNNALKQDCC*HHKDVI
Trigger: AATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTT...TAAAGCATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR CCA 90 bp ATCTTGATCACGGTGGTGTTTCCCAAGTGTATACACTCACCAAAACTATACTTAGTCTGTGTAATTCCTTaGAGATCTCTTGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: ILITVVFPKCIHSPKLYLVCVIP*RSLGRS
Trigger: AGACCTTCCAAGAGATCTCCAAGGAATTACACAGAC...TAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAACACCACCGTGATCAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp TTTCCCAAGTGTATACACTCACCAAAACTATACTTAGAACTCAAAACTCGCCAACTATGTTACCTAGGCTaGTTTCAAACTCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: FPKCIHSPKLYLELKTRQLCYLG*FQTLAS
Trigger: TGAGGCCAGAGTTTGAAACCAGCCTAGGTAACATAG...TTGGCGAGTTTTGAGTTCTAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp TTTCCCAAGTGTATACACTCACCAAAACTATACTTAGAACTCAAAACTCGCCAAATCAGCCACCTCACCTaGCCAACCTGTATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: FPKCIHSPKLYLELKTRQISHLT*PTCIFL
Trigger: AAGAAAAATACAGGTTGGCCAGGTGAGGTGGCTGAT...TTGGCGAGTTTTGAGTTCTAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CCA 90 bp ATCTTGATCACGGTGGTGTTTCCCAAGTGTATACACTCACCAAAACTATACTTACCCAAAAACTTTATCTaGAGCCAAGCCAGACACAAA +
Preference number: 4 (lower is better)
Translates to: ILITVVFPKCIHSPKLYLPKNFI*SQARHK
Trigger: TTTGTGTCTGGCTTGGCTCCAGATAAAGTTTTTGGG...TAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAACACCACCGTGATCAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR TCA 90 bp ATCTTGATCACGGTGGTGTTTCCCAAGTGTATACACTCACCAAAACTATACTTAAATGACTTCAGATTCTaGAAAAAGGCAAATCTGACC +
Preference number: 4 (lower is better)
Translates to: ILITVVFPKCIHSPKLYLNDFRF*KKANLT
Trigger: GGTCAGATTTGCCTTTTTTCAGAATCTGAAGTCATT...TAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAACACCACCGTGATCAAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS GCA 90 bp CCTGCGCCGGTCGCCACTGCCGGCCGCCAGAACCTCGGAGGCCACTaGCCCTGGGCGTTCTCCGGAGGGCCAAGCCCTTGGTTGTGCACA +
Preference number: 5 (lower is better)
Translates to: PAPVATAGRQNLGGH*PWAFSGGPSPWLCT
Trigger: TGTGCACAACCAAGGGCTTGGCCCTCCGGAGAACGCCCAGGGGCAGTGGCCTCCGAGGTTCTGGCGGCCGGCAGTGGCGACCGGCGCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000473740.5
ENST00000611880.4
ENST00000618114.2
ENST00000630945.2
CDS CCA 90 bp CCGGTCGCCACTGCCGGCCGCCAGAACCTCGGAGGCCACTGCCCCTaGGCGTTCTCCGGAGGGCCAAGCCCTTGGTTGTGCACATCTATG +
Preference number: 5 (lower is better)
Translates to: PVATAGRQNLGGHCP*AFSGGPSPWLCTSM
Trigger: CATAGATGTGCACAACCAAGGGCTTGGCCCTCCGGAGAACGCCCAGGGGCAGTGGCCTCCGAGGTTCTGGCGGCCGGCAGTGGCGACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000473740.5
ENST00000611880.4
ENST00000618114.2
ENST00000630945.2
CDS CCA 90 bp GGCCAAGCCCCTGCATTCGCCCTCGCAAGTGCCAGCAAGCGACTCTaGTCGCCGCGCTCCCAAGTCCTCCCCCGAAATTCCGGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: GQAPAFALASASKRL*SPRSQVLPRNSGSG
Trigger: GCCAGAGCCGGAATTTCGGGGGAGGACTTGGGAGCGCGGCGACCAGAGTCGCTTGCTGGCACTTGCGAGGGCGAATGCAGGGGCTTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000473740.5
ENST00000611880.4
ENST00000618114.2
ENST00000630945.2
CDS GCA 90 bp AGGCCGGAAGGGAGCTCTGGTCCAAGGTCATCTCGGCCAAGCCCCTaGATTCGCCCTCGCAAGTGCCAGCAAGCGACTCTGGTCGCCGCG +
Preference number: 5 (lower is better)
Translates to: RPEGSSGPRSSRPSP*IRPRKCQQATLVAA
Trigger: CGCGGCGACCAGAGTCGCTTGCTGGCACTTGCGAGGGCGAATGCAGGGGCTTGGCCGAGATGACCTTGGACCAGAGCTCCCTTCCGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000473740.5
ENST00000611880.4
ENST00000618114.2
ENST00000630945.2
CDS CCA 90 bp CTTCGGAGCGCTCTCATCTGTGCGTCCTGGGCAGAGCGAGAGACTTaGCGGAATGCGGGTAGGAGAACCGGTCTCGGGTTGCCGCCAGGG +
Preference number: 5 (lower is better)
Translates to: LRSALICASWAERET*RNAGRRTGLGLPPG
Trigger: CCCTGGCGGCAACCCGAGACCGGTTCTCCTACCCGCATTCCGCCAAGTCTCTCGCTCTGCCCAGGACGCACAGATGAGAGCGCTCCGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000403208.7
ENST00000618502.4
ENST00000619254.4
ENST00000627998.2
CDS CCA 90 bp CACATGAGCGCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTaGTCAAACAGCTCTGTGGCCAGGATCCCCGTCACTCCGGCTAGA +
Preference number: 5 (lower is better)
Translates to: HMSAPQTMQAAGLAI*SNSSVARIPVTPAR
Trigger: TCTAGCCGGAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGCTCATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486907.1
ENST00000489322.5
ENST00000625663.2
ENST00000631328.1
CDS GCA 90 bp CCATTCCCTCCCAGAAGCCCCGGCATGAGGTGGTCTCTGAGGGCCTaGAGGGGACATTGCATTCACACCCACCCACTGTGCACCCAGGCA +
Preference number: 5 (lower is better)
Translates to: PFPPRSPGMRWSLRA*RGHCIHTHPLCTQA
Trigger: TGCCTGGGTGCACAGTGGGTGGGTGTGAATGCAATGTCCCCTGCAGGCCCTCAGAGACCACCTCATGCCGGGGCTTCTGGGAGGGAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486907.1
ENST00000489322.5
ENST00000625663.2
ENST00000631328.1
CDS CCA 90 bp AGACCATGCAGGCAGCAGGCCTGGCCATCTGGTCAAACAGCTCTGTaGCCAGGATCCCCGTCACTCCGGCTAGAAGGAGGGGCAGGGACA +
Preference number: 5 (lower is better)
Translates to: RPCRQQAWPSGQTAL*PGSPSLRLEGGAGT
Trigger: TGTCCCTGCCCCTCCTTCTAGCCGGAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACCAGATGGCCAGGCCTGCTGCCTGCATGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486907.1
ENST00000489322.5
ENST00000625663.2
ENST00000631328.1
CDS GCA 90 bp ATGCGGGTAGGAGAACCGGTCTCGGGTTGCCGCCAGGGGATCCATTaGGTGAGAGGCAGGTCCGACTTATGCTGGGGGCACTTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: MRVGEPVSGCRQGIH*VRGRSDLCWGHLEL
Trigger: CAACTCCAAGTGCCCCCAGCATAAGTCGGACCTGCCTCTCACGCAATGGATCCCCTGGCGGCAACCCGAGACCGGTTCTCCTACCCGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS GCA 90 bp AGCGAGAGACTTGGCGGAATGCGGGTAGGAGAACCGGTCTCGGGTTaGCGCCAGGGGATCCATTGCGTGAGAGGCAGGTCCGACTTATGC +
Preference number: 5 (lower is better)
Translates to: SERLGGMRVGEPVSG*RQGIHCVRGRSDLC
Trigger: GCATAAGTCGGACCTGCCTCTCACGCAATGGATCCCCTGGCGGCAACCCGAGACCGGTTCTCCTACCCGCATTCCGCCAAGTCTCTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000403208.7
ENST00000618502.4
ENST00000627998.2
CDS GCA 90 bp GTCCGAGGCCGTAAGGACGGCTCCAGTTCATCCTCCATCCGCCTCTaGCGCAGCACTGAGGCTGAAAAGCCGCTCACTCCTTACTCGGCT +
Preference number: 5 (lower is better)
Translates to: VRGRKDGSSSSSIRL*RSTEAEKPLTPYSA
Trigger: AGCCGAGTAAGGAGTGAGCGGCTTTTCAGCCTCAGTGCTGCGGCAGAGGCGGATGGAGGATGAACTGGAGCCGTCCTTACGGCCTCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000398356.6
ENST00000405286.6
ENST00000423972.5
ENST00000440493.5
ENST00000467660.5
ENST00000473740.5
ENST00000492516.1
ENST00000611880.4
ENST00000618114.2
ENST00000619254.4
ENST00000625546.2
ENST00000629072.2
ENST00000629525.1
ENST00000630489.2
ENST00000630945.2
CDS-3UTR CAA 90 bp ACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACCCGCCAGGGGATCCATaGCGTGAGAGGCAGGTCCGA +
Preference number: 5 (lower is better)
Translates to: TPLSDEVGPPGMHTHTHYPPGDP*RERQVR
Trigger: TCGGACCTGCCTCTCACGCAATGGATCCCCTGGCGG...GTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CAA 90 bp CCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTAGAACCGGTCTCGGGTaGCCGCCAGGGGATCCATTG +
Preference number: 5 (lower is better)
Translates to: PLPSQTRSGLLVCIPIPTRTGLG*PPGDPL
Trigger: CAATGGATCCCCTGGCGGCAACCCGAGACCGGTTCT...AGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CAA 90 bp CGGAGGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCGCAGGGAGTCTGCAATaGCCCCGTGCCTCTTCCTAT +
Preference number: 5 (lower is better)
Translates to: RRRRRRTPSHSRRAPWHCAGSLQ*PRASSY
Trigger: ATAGGAAGAGGCACGGGGCAATTGCAGACTCCCTGC...GCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCTCCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS GCA 90 bp AGAGGTGGGCCTTCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGGGA +
Preference number: 5 (lower is better)
Translates to: RGGPSQRDGQGTCKQ*SKEASQGIQRHDEG
Trigger: TCCCTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGGCCCACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403208.7
ENST00000627998.2
CDS CCA 90 bp CCCCAAGCTCATCTCAGTCTTCGGAGCGCTCTCATCTGTGCGTCCTaGGCAGAGCGAGAGACTTGGCGGAATGCGGGTAGGAGAACCGGT +
Preference number: 5 (lower is better)
Translates to: PQAHLSLRSALICAS*AERETWRNAGRRTG
Trigger: ACCGGTTCTCCTACCCGCATTCCGCCAAGTCTCTCGCTCTGCCCAGGACGCACAGATGAGAGCGCTCCGAAGACTGAGATGAGCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398356.6
ENST00000619254.4
CDS CCA 90 bp TGCTACAGTCTCTGGACTAAATGTCTGCGGGTCTCTGTCTCTCGCTaGTCTGACCTCAGCCGCAACCCTGCGCGATTCCCTGCGCCGGTC +
Preference number: 5 (lower is better)
Translates to: CYSLWTKCLRVSVSR*SDLSRNPARFPAPV
Trigger: GACCGGCGCAGGGAATCGCGCAGGGTTGCGGCTGAGGTCAGACCAGCGAGAGACAGAGACCCGCAGACATTTAGTCCAGAGACTGTAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000473740.5
ENST00000611880.4
ENST00000618114.2
ENST00000630945.2
CDS-3UTR CAA 90 bp GATCCACATGAGCGCCCCGCAGACCATGCAGGCAGCAGGCCTGGCCATCTGGTCATGCTCACACCTGCATaGACTCCCACGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: DPHERPADHAGSRPGHLVMLTPA*TPTSSL
Trigger: AAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCAT...GACCAGATGGCCAGGCCTGCTGCCTGCATGGTCTGCGGGGCGCTCATGTGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CAA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGCCGCCAGGGGATCCATaGCGTGAGAGGCAGGTCCGA +
Preference number: 5 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGPPGDP*RERQVR
Trigger: TCGGACCTGCCTCTCACGCAATGGATCCCCTGGCGG...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CAA 90 bp CCATGGCACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATAGGCCAGATGCCTCTTaGCCAGAGTCCTACCACCCT +
Preference number: 5 (lower is better)
Translates to: PWHCPEPRGLSPVSSGPDRPDAS*PESYHP
Trigger: AGGGTGGTAGGACTCTGGCAAAGAGGCATCTGGCCT...ATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTGCCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS GCA 90 bp GGAGGGACTTCTTCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGGGA +
Preference number: 5 (lower is better)
Translates to: GGTSSQRDGQGTCKQ*SKEASQGIQRHDEG
Trigger: TCCCTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGAAGTCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000489322.5
ENST00000625546.2
ENST00000625663.2
ENST00000630215.2
CDS GCA 90 bp GAAAAGCCGCTCACTCCTTACTCGGCTAAGCCCCAAGCTCATCTCTaGAGGCCGGAAGGGAGCTCTGGTCCAAGGTCATCTCGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: EKPLTPYSAKPQAHL*RPEGSSGPRSSRPS
Trigger: GCTTGGCCGAGATGACCTTGGACCAGAGCTCCCTTCCGGCCTGCAGAGATGAGCTTGGGGCTTAGCCGAGTAAGGAGTGAGCGGCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000473740.5
ENST00000492516.1
ENST00000611880.4
ENST00000618114.2
ENST00000629525.1
ENST00000630945.2
CDS GCA 90 bp CACTGTGCACCCAGGCACCCATCACTCCTTCTATGTGATGATGGATaGCCAGAGCCCCTTGGGCCCACTCACCAGGGCCAATGCCAAAGC +
Preference number: 5 (lower is better)
Translates to: HCAPRHPSLLLCDDG*PEPLGPTHQGQCQS
Trigger: GCTTTGGCATTGGCCCTGGTGAGTGGGCCCAAGGGGCTCTGGGCATCCATCATCACATAGAAGGAGTGATGGGTGCCTGGGTGCACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486907.1
ENST00000489322.5
ENST00000625663.2
ENST00000631328.1
CDS GCA 90 bp GCCTGCAGGCTGCAGCGCTCCTCATTAAAGGGCATTCAGGGGGTATaGAGGAAGCACTTACCTTCCCAGCGTGATGGCCAAGGGACCTGC +
Preference number: 5 (lower is better)
Translates to: ACRLQRSSLKGIQGV*RKHLPSQRDGQGTC
Trigger: GCAGGTCCCTTGGCCATCACGCTGGGAAGGTAAGTGCTTCCTGCATACCCCCTGAATGCCCTTTAATGAGGAGCGCTGCAGCCTGCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491948.5
ENST00000631313.2
CDS-3UTR CAA 90 bp CTTCCGGCACTCCTGCCTTCCGGAACACGGAGGAGGCGTAGGCGTACACCGAGTTCAAAGGAGCCTGCTTaGCGGCTGAATCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: LPALLPSGTRRRRRRTPSSKEPA*RLNPNR
Trigger: CCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGA...ACTCGGTGTACGCCTACGCCTCCTCCGTGTTCCGGAAGGCAGGAGTGCCGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CAA 90 bp GGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAACCACGAGGCCCGCCTGGGGAAGTaGAGTCTGTGTAATTCCTTG +
Preference number: 5 (lower is better)
Translates to: GVHRVIPAELHGTAQNHEARLGK*SLCNSL
Trigger: CAAGGAATTACACAGACTCAACTTCCCCAGGCGGGC...CTCGTGGTTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CAA 90 bp CCATGGCACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCCCGCCTGGGGAAGTaGAGTCTGTGTAATTCCTTG +
Preference number: 5 (lower is better)
Translates to: PWHCPEPRGLSPVSSGPDARLGK*SLCNSL
Trigger: CAAGGAATTACACAGACTCAACTTCCCCAGGCGGGC...ATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTGCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CAA 90 bp CTGTTCCCCTACTCCCCACGGTGCAGATATGAGCCCAGTGGTCTAATCCAGTCTCCGCCAGGGGATCCATaGCGTGAGAGGCAGGTCCGA +
Preference number: 5 (lower is better)
Translates to: LFPYSPRCRYEPSGLIQSPPGDP*RERQVR
Trigger: TCGGACCTGCCTCTCACGCAATGGATCCCCTGGCGG...AGACTGGATTAGACCACTGGGCTCATATCTGCACCGTGGGGAGTAGGGGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR CAA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGAGAACCGGTCTCGGGTaGCCGCCAGGGGATCCATTG +
Preference number: 5 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGRTGLG*PPGDPL
Trigger: CAATGGATCCCCTGGCGGCAACCCGAGACCGGTTCT...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CAA 90 bp AGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAAAGGCCAGATGCCTCTTaGCCAGAGTCCTACCACCCT +
Preference number: 5 (lower is better)
Translates to: RRRRTPSHSRRAPWHCPERPDAS*PESYHP
Trigger: AGGGTGGTAGGACTCTGGCAAAGAGGCATCTGGCCT...TTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS GCA 90 bp ACGGTATTTAGAGGTGGGCCTTCCCAGCGTGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAGGCCTCCCAGGGGATACAGAGACAC +
Preference number: 5 (lower is better)
Translates to: TVFRGGPSQRDGQGT*KQCSKEASQGIQRH
Trigger: GTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGGCCCACCTCTAAATACCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403208.7
ENST00000627998.2
CDS GCA 90 bp GAAAGAGAGGCTTCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGGGA +
Preference number: 5 (lower is better)
Translates to: EREASQRDGQGTCKQ*SKEASQGIQRHDEG
Trigger: TCCCTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGCCTCTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436643.5
ENST00000627257.2
CDS CCA 90 bp CTATCCAAGTCTGGGTCTGAACATCAAGATCCCTCCCACCCAGGTTaGGACCAAGAGAGGACAGGGCCACTGCCCCACCTCATCCCTAGC +
Preference number: 5 (lower is better)
Translates to: LSKSGSEHQDPSHPG*DQERTGPLPHLIPS
Trigger: GCTAGGGATGAGGTGGGGCAGTGGCCCTGTCCTCTCTTGGTCCCAACCTGGGTGGGAGGGATCTTGATGTTCAGACCCAGACTTGGATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS CCA 90 bp TGGCAGAAAGTGCCACCTAGTGGATGCCTGGCTGAAGCCCCTCAGTaGGCAGCTGTTAGCCAGTACCCACTCAGACAGGGACAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: WQKVPPSGCLAEAPQ*AAVSQYPLRQGQSP
Trigger: TGGAGACTGTCCCTGTCTGAGTGGGTACTGGCTAACAGCTGCCCACTGAGGGGCTTCAGCCAGGCATCCACTAGGTGGCACTTTCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492516.1
ENST00000629525.1
CDS-3UTR CAA 90 bp CCATGGCACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATATGCTCACACCTGCATaGACTCCCACGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: PWHCPEPRGLSPVSSGPDMLTPA*TPTSSL
Trigger: AAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCAT...ATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTGCCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CAA 90 bp AAGGGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGGCCCGCCTGGGGAAGTaGAGTCTGTGTAATTCCTTG +
Preference number: 5 (lower is better)
Translates to: KGNPRPTRMSMIHMSAPQARLGK*SLCNSL
Trigger: CAAGGAATTACACAGACTCAACTTCCCCAGGCGGGC...CTGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CAA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCGGGCCAAGCCCTTGGTaGTGCACATCTATGCACGCC +
Preference number: 5 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTGPSPW*CTSMHA
Trigger: GGCGTGCATAGATGTGCACAACCAAGGGCTTGGCCC...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS TCA 90 bp TACTGCCTACATCCCTGCTCCTGGCTCTGGGCTCGGCCAATAGGATaGGGCTGCAGTGAGGGCGTACCATGTTCCAGCCTAAGCCTTAAG +
Preference number: 5 (lower is better)
Translates to: YCLHPCSWLWARPIG*GCSEGVPCSSLSLK
Trigger: CTTAAGGCTTAGGCTGGAACATGGTACGCCCTCACTGCAGCCTCATCCTATTGGCCGAGCCCAGAGCCAGGAGCAGGGATGTAGGCAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS TCA 90 bp AAAGGGCATTCAGGGGGTATGCAGGAAGCACTTACCTTCCCAGCGTaGTGGCCAAGGGACCTGCAAGCAGTGCTCCAAAGAGGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: KGHSGGMQEALTFPA*WPRDLQAVLQRGLP
Trigger: TGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGGTAAGTGCTTCCTGCATACCCCCTGAATGCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491948.5
ENST00000631313.2
CDS GCA 90 bp TATTCACCAGGAGGGACTTCTTCCCAGCGTGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAGGCCTCCCAGGGGATACAGAGACAC +
Preference number: 5 (lower is better)
Translates to: YSPGGTSSQRDGQGT*KQCSKEASQGIQRH
Trigger: GTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGAAGTCCCTCCTGGTGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000489322.5
ENST00000625546.2
ENST00000625663.2
ENST00000630215.2
CDS GCA 90 bp AAGCACTTACCTTCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGGGA +
Preference number: 5 (lower is better)
Translates to: KHLPSQRDGQGTCKQ*SKEASQGIQRHDEG
Trigger: TCCCTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGGTAAGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491948.5
ENST00000631313.2
CDS GCA 90 bp GTATGCAGGAAGCACTTACCTTCCCAGCGTGATGGCCAAGGGACCTaGAAGCAGTGCTCCAAAGAGGCCTCCCAGGGGATACAGAGACAC +
Preference number: 5 (lower is better)
Translates to: VCRKHLPSQRDGQGT*KQCSKEASQGIQRH
Trigger: GTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGGTAAGTGCTTCCTGCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491948.5
ENST00000631313.2
CDS CCA 90 bp AAATTCCGGCTCTGGCCCCTCGTCCCCCTCCTTTGCTACAGTCTCTaGACTAAATGTCTGCGGGTCTCTGTCTCTCGCTGGTCTGACCTC +
Preference number: 5 (lower is better)
Translates to: KFRLWPLVPLLCYSL*TKCLRVSVSRWSDL
Trigger: GAGGTCAGACCAGCGAGAGACAGAGACCCGCAGACATTTAGTCCAGAGACTGTAGCAAAGGAGGGGGACGAGGGGCCAGAGCCGGAATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000473740.5
ENST00000611880.4
ENST00000618114.2
ENST00000630945.2
CDS CCA 90 bp GACAAGACATGGACAGCCAAAGGGGCCCAGCTAAGCCACCCTCACTaGGACTATTCTAGATCAGCCAGCCAATGCCCAGCTGAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: DKTWTAKGAQLSHPH*DYSRSASQCPAELQ
Trigger: CTGCAGCTCAGCTGGGCATTGGCTGGCTGATCTAGAATAGTCCCAGTGAGGGTGGCTTAGCTGGGCCCCTTTGGCTGTCCATGTCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS-3UTR CAA 90 bp TCGGAGCTCCTTAGGGGCGCTCTCCCCCAGGTACATGGGCTGGATGTTCATGCTATGCTCACACCTGCATaGACTCCCACGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: SELLRGALPQVHGLDVHAMLTPA*TPTSSL
Trigger: AAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCAT...AGCATGAACATCCAGCCCATGTACCTGGGGGAGAGCGCCCCTAAGGAGCTCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR CAA 90 bp GCAGAGCTCCATGGCACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGATGCTCACACCTGCATaGACTCCCACGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: AELHGTAQNHEACHLSPQMLTPA*TPTSSL
Trigger: AAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCAT...CTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CAA 90 bp CAGCTCCCAGTCCCGATGATCGCGTACTGGATCTTCGCTTCCGGCACTCCTGCCATCTCTTGGAAGGTCTaGCCTTTGGTCTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: QLPVPMIAYWIFASGTPAISWKV*PLVSGR
Trigger: CCTTCCTGAGACCAAAGGCAAGACCTTCCAAGAGAT...GGCAGGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGGGACTGGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CAA 90 bp CCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCGCCCGCCTGGGGAAGTaGAGTCTGTGTAATTCCTTG +
Preference number: 5 (lower is better)
Translates to: PSQTRSGLLVCIPIPTTTARLGK*SLCNSL
Trigger: CAAGGAATTACACAGACTCAACTTCCCCAGGCGGGC...GGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CAA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCTGGGGGCACTTGGAGTaGAGGAACCACAGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTWGHLE*RNHRVH
Trigger: GTGGACTCTGTGGTTCCTCAACTCCAAGTGCCCCCA...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CAA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGTGGGGGCACTTGGAGTaGAGGAACCACAGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGWGHLE*RNHRVH
Trigger: GTGGACTCTGTGGTTCCTCAACTCCAAGTGCCCCCA...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CAA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTAGAACCGGTCTCGGGTaGCCGCCAGGGGATCCATTG +
Preference number: 5 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGARTGLG*PPGDPL
Trigger: CAATGGATCCCCTGGCGGCAACCCGAGACCGGTTCT...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000618502.4
ENST00000619254.4
CDS-3UTR CAA 90 bp AGCAGTGCTCCAAAGAGGCCTCCCAGGGGATACAGAGACACGATGAGGGACCACTCCTGGGAGAGTAGGTaGCTAGAGGCTTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: SSAPKRPPRGYRDTMRDHSWESR*LEASMS
Trigger: GGACATGGAAGCCTCTAGCAACCTACTCTCCCAGGA...GTGGTCCCTCATCGTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418102.5
ENST00000630108.2
CDS-3UTR CAA 90 bp ACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACCCACACACACACACTTaGGTTCAGGTATCCCCGACC +
Preference number: 5 (lower is better)
Translates to: TPLSDEVGPPGMHTHTHYPHTHT*VQVSPT
Trigger: GGTCGGGGATACCTGAACCAAAGTGTGTGTGTGTGG...GTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CAA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGCGGAGGGCCAAGCCCTaGGTTGTGCACATCTATGCA +
Preference number: 5 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGRRAKP*VVHIYA
Trigger: TGCATAGATGTGCACAACCAAGGGCTTGGCCCTCCG...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CAA 90 bp GGGTGCTTACCTGAGTCCGACCACCTGTCCCATCACGATCCCCAGAGCCGTAAAATGCTCACACCTGCATaGACTCCCACGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: GCLPESDHLSHHDPQSRKMLTPA*TPTSSL
Trigger: AAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCAT...TTTACGGCTCTGGGGATCGTGATGGGACAGGTGGTCGGACTCAGGTAAGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423972.5
ENST00000625546.2
CDS-3UTR CAA 90 bp AGTCCCGATGATCGCGTACTGGATCTTCGCTTCCGGCACTCCTGCCTTCCGGAATGGAAGGTCTTGCCTTaGGTCTCAGGAAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: SPDDRVLDLRFRHSCLPEWKVLP*VSGRNR
Trigger: CCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCCA...TTCCGGAAGGCAGGAGTGCCGGAAGCGAAGATCCAGTACGCGATCATCGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CAA 90 bp ACGATCCCCAGAGCCGTAAAGATGGCTGAGCTCATGGCCACAGCTCCTCGGAGCATCTCTTGGAAGGTCTaGCCTTTGGTCTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: TIPRAVKMAELMATAPRSISWKV*PLVSGR
Trigger: CCTTCCTGAGACCAAAGGCAAGACCTTCCAAGAGAT...GCTCCGAGGAGCTGTGGCCATGAGCTCAGCCATCTTTACGGCTCTGGGGATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR CAA 90 bp AGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGAAATCTCTTGGAAGGTCTaGCCTTTGGTCTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: RRRRTPSHSRRAPWHCPEISWKV*PLVSGR
Trigger: CCTTCCTGAGACCAAAGGCAAGACCTTCCAAGAGAT...TTCTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CAA 90 bp GTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTGCCCGCCTGGGGAAGTaGAGTCTGTGTAATTCCTTG +
Preference number: 5 (lower is better)
Translates to: VPQVWDWGGLLIANGHVGARLGK*SLCNSL
Trigger: CAAGGAATTACACAGACTCAACTTCCCCAGGCGGGC...ACCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CAA 90 bp GGAAATCCCAGGCCGACCAGGATGAGCATGATCCACATGAGCGCCCCGCAGACCTGCTACCTTGAACTCTaGGACTCAAGTGATCCTGCT +
Preference number: 5 (lower is better)
Translates to: GNPRPTRMSMIHMSAPQTCYLEL*DSSDPA
Trigger: AGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGCA...GGTCTGCGGGGCGCTCATGTGGATCATGCTCATCCTGGTCGGCCTGGGATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CAA 90 bp CACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGATGCTACCTTGAACTCTaGGACTCAAGTGATCCTGCT +
Preference number: 5 (lower is better)
Translates to: HCPEPRGLSPVSSGPDAGCYLEL*DSSDPA
Trigger: AGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGCA...TCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CAA 90 bp GGAGGCGTAGGCGTACACCGAGTCATTCCCGCAGAGCTCCATGGCACTGCCCAGGGAACACGTTTGTCTTaGAAAGCCCAAATCTTCACC +
Preference number: 5 (lower is better)
Translates to: GGVGVHRVIPAELHGTAQGTRLS*KAQIFT
Trigger: GGTGAAGATTTGGGCTTTCAAAGACAAACGTGTTCC...CTGGGCAGTGCCATGGAGCTCTGCGGGAATGACTCGGTGTACGCCTACGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CAA 90 bp GAAGTGGGACAAGGCCTCCATGATAAAGGGAAATCCCAGGCCGACCAGGATGAGGCAGGGAGTCTGCAATaGCCCCGTGCCTCTTCCTAT +
Preference number: 5 (lower is better)
Translates to: EVGQGLHDKGKSQADQDEAGSLQ*PRASSY
Trigger: ATAGGAAGAGGCACGGGGCAATTGCAGACTCCCTGC...CTCATCCTGGTCGGCCTGGGATTTCCCTTTATCATGGAGGCCTTGTCCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CAA 90 bp CCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTCCACACACACACACTTaGGTTCAGGTATCCCCGACC +
Preference number: 5 (lower is better)
Translates to: PLRRGRASWYAYPYPLQPPHTHT*VQVSPT
Trigger: GGTCGGGGATACCTGAACCAAAGTGTGTGTGTGTGG...AGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CAA 90 bp TCTTTTCTGACCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCATGCTCACACCTGCATaGACTCCCACGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: SFLTTPLSDEVGPPGMHTMLTPA*TPTSSL
Trigger: AAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCAT...GGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGGTCAGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CAA 90 bp CCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTTGGAAGGTCTTGCCTTaGGTCTCAGGAAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: PLRRGRASWYAYPYPLQPWKVLP*VSGRNR
Trigger: CCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCCA...AGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CAA 90 bp CCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCATCTCTTGGAAGGTCTaGCCTTTGGTCTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: PSQTRSGLLVCIPIPTTTISWKV*PLVSGR
Trigger: CCTTCCTGAGACCAAAGGCAAGACCTTCCAAGAGAT...GGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CAA 90 bp CCATGGCACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATAGTCTGTGTAATTCCTaGGAGATCTCTTGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: PWHCPEPRGLSPVSSGPDSLCNS*EISWKV
Trigger: GACCTTCCAAGAGATCTCCAAGGAATTACACAGACT...ATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTGCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CAA 90 bp GAAGTGGGACAAGGCCTCCATGATAAAGGGAAATCCCAGGCCGACCAGGATGAGGTGAAGACCTGTTCTTaGCTCCCTGACCTGAGTCCG +
Preference number: 5 (lower is better)
Translates to: EVGQGLHDKGKSQADQDEVKTCS*LPDLSP
Trigger: CGGACTCAGGTCAGGGAGCAAAGAACAGGTCTTCAC...CTCATCCTGGTCGGCCTGGGATTTCCCTTTATCATGGAGGCCTTGTCCCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CAA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTCGGAGGGCCAAGCCCTaGGTTGTGCACATCTATGCA +
Preference number: 5 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGARRAKP*VVHIYA
Trigger: TGCATAGATGTGCACAACCAAGGGCTTGGCCCTCCG...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS GCA 90 bp GGGACTATTCTAGATCAGCCAGCCAATGCCCAGCTGAGCTGCAGTTaGAGGAATGACCAAGATCAGCAGAGCCATCAGCCAGAACCATCC +
Preference number: 5 (lower is better)
Translates to: GTILDQPANAQLSCS*RNDQDQQSHQPEPS
Trigger: GGATGGTTCTGGCTGATGGCTCTGCTGATCTTGGTCATTCCTGCAACTGCAGCTCAGCTGGGCATTGGCTGGCTGATCTAGAATAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS CCA 90 bp TGGGCAAGTATGAGAATTCATACCATTCTAGATCGCAGGAGGGCGTaGAGCATTCGAAAGAGGGGCCTGAGCGGAGGTCTTGCTGTCCCA +
Preference number: 5 (lower is better)
Translates to: WASMRIHTILDRRRA*SIRKRGLSGGLAVP
Trigger: TGGGACAGCAAGACCTCCGCTCAGGCCCCTCTTTCGAATGCTCCACGCCCTCCTGCGATCTAGAATGGTATGAATTCTCATACTTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CAA 90 bp TCTCAGGAAGGAACAGGCCAGTGTAGATGGCCCCACAGACACAGACACCAAGGATGGAAGGTCTTGCCTTaGGTCTCAGGAAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: SQEGTGQCRWPHRHRHQGWKVLP*VSGRNR
Trigger: CCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCCA...TCCTTGGTGTCTGTGTCTGTGGGGCCATCTACACTGGCCTGTTCCTTCCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CAA 90 bp GGCAAAGATGCAGGCCATGGCCAGGTAGAGTGTCCAGGGGAAGGAGCTCTGCAGAGTCTGTGTAATTCCTaGGAGATCTCTTGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: GKDAGHGQVECPGEGALQSLCNS*EISWKV
Trigger: GACCTTCCAAGAGATCTCCAAGGAATTACACAGACT...CTGCAGAGCTCCTTCCCCTGGACACTCTACCTGGCCATGGCCTGCATCTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CAA 90 bp CCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGGGCCCGATGCTGGAACAGCTAGTCTGTGTAATTCCTaGGAGATCTCTTGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: PEPRGLSPVSSGPDAGTASLCNS*EISWKV
Trigger: GACCTTCCAAGAGATCTCCAAGGAATTACACAGACT...AGCTGTTCCAGCATCGGGCCCTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CAA 90 bp CCACTCCCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTAGTCTGTGTAATTCCTaGGAGATCTCTTGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: PLPSQTRSGLLVCIPIPTSLCNS*EISWKV
Trigger: GACCTTCCAAGAGATCTCCAAGGAATTACACAGACT...AGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGGGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CAA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTGCCCGCCTGGGGAAGTaGAGTCTGTGTAATTCCTTG +
Preference number: 5 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAARLGK*SLCNSL
Trigger: CAAGGAATTACACAGACTCAACTTCCCCAGGCGGGC...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp CCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGCTACCTTGAACTCTaGGACTCAAGTGATCCTGCT +
Preference number: 5 (lower is better)
Translates to: PSQTRSGLLVCIPIPTTTCYLEL*DSSDPA
Trigger: AGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGCA...GGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CAA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGGCAAATCTGACCAATaGAGGCAGAAAGCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGGKSDQ*RQKAGQ
Trigger: CTGACCTGCTTTCTGCCTCAATTGGTCAGATTTGCC...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CAA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCGTGAAGACCTGTTCTTaGCTCCCTGACCTGAGTCCG +
Preference number: 5 (lower is better)
Translates to: PRLVSNFWSQSNLPILASVKTCS*LPDLSP
Trigger: CGGACTCAGGTCAGGGAGCAAAGAACAGGTCTTCAC...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS TCA 90 bp GACTTATGCTGGGGGCACTTGGAGTTGAGGAACCACAGAGTCCACTaGACCGGATTAATCTTTTATCCCTCAGGGCTTCTCAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: DLCWGHLELRNHRVH*TGLIFYPSGLLRPC
Trigger: GCAGGGCCTGAGAAGCCCTGAGGGATAAAAGATTAATCCGGTTCAGTGGACTCTGTGGTTCCTCAACTCCAAGTGCCCCCAGCATAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS TCA 90 bp CAGCCTTGGTCACTGTCAAGACTGGGGATTAGGCTCAGGGAGAGGTaGAATGACTTGCTCACAGCGTTAGCCACAGGTCAGAGTTGTACC +
Preference number: 5 (lower is better)
Translates to: QPWSLSRLGIRLRER*NDLLTALATGQSCT
Trigger: GGTACAACTCTGACCTGTGGCTAACGCTGTGAGCAAGTCATTTCACCTCTCCCTGAGCCTAATCCCCAGTCTTGACAGTGACCAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440493.5
CDS TCA 90 bp TCTAGATCAGCCAGCCAATGCCCAGCTGAGCTGCAGTTGCAGGAATaGCCAAGATCAGCAGAGCCATCAGCCAGAACCATCCTAGATCAG +
Preference number: 5 (lower is better)
Translates to: SRSASQCPAELQLQE*PRSAEPSARTILDQ
Trigger: CTGATCTAGGATGGTTCTGGCTGATGGCTCTGCTGATCTTGGTCATTCCTGCAACTGCAGCTCAGCTGGGCATTGGCTGGCTGATCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS GCA 90 bp CTCACTGGGACTATTCTAGATCAGCCAGCCAATGCCCAGCTGAGCTaGAGTTGCAGGAATGACCAAGATCAGCAGAGCCATCAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: LTGTILDQPANAQLS*SCRNDQDQQSHQPE
Trigger: TTCTGGCTGATGGCTCTGCTGATCTTGGTCATTCCTGCAACTGCAGCTCAGCTGGGCATTGGCTGGCTGATCTAGAATAGTCCCAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS-3UTR CAA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTTCAAAGGAGCCTGCTTaGCGGCTGAATCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGASKEPA*RLNPNR
Trigger: CCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGA...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCATGCTCACACCTGCATaGACTCCCACGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: PRLVSNFWSQSNLPILASMLTPA*TPTSSL
Trigger: AAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCAT...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp CACAGACACAGACACCAAGGAAAGGGACATAGAGGAAGTGGGACAAGGCCTCCAATGCTCACACCTGCATaGACTCCCACGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: HRHRHQGKGHRGSGTRPPMLTPA*TPTSSL
Trigger: AAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCAT...TGGAGGCCTTGTCCCACTTCCTCTATGTCCCTTTCCTTGGTGTCTGTGTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CAA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCTGGAAGGTCTTGCCTTaGGTCTCAGGAAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: PRLVSNFWSQSNLPILASWKVLP*VSGRNR
Trigger: CCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCCA...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTTGGAAGGTCTTGCCTTaGGTCTCAGGAAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAWKVLP*VSGRNR
Trigger: CCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCCA...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp GTAGCTGGCTTTGGCTCTGGCCACCCCTTTGGGACTAGAGTTCTGTTGACTGGAATCTCTTGGAAGGTCTaGCCTTTGGTCTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: VAGFGSGHPFGTRVLLTGISWKV*PLVSGR
Trigger: CCTTCCTGAGACCAAAGGCAAGACCTTCCAAGAGAT...TCCAGTCAACAGAACTCTAGTCCCAAAGGGGTGGCCAGAGCCAAAGCCAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CAA 90 bp CTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATGATCATCTCAAAGGCCCGCCTGGGGAAGTaGAGTCTGTGTAATTCCTTG +
Preference number: 5 (lower is better)
Translates to: LTPALTPTSSLPSMIISKARLGK*SLCNSL
Trigger: CAAGGAATTACACAGACTCAACTTCCCCAGGCGGGC...CTTTGAGATGATCATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR CAA 90 bp TCTAATCCAGTCTTGCTGATCCAGTGCTGGTGCTATGGTTTGAAGGTTTGTGTCAGAACCGGTCTCGGGTaGCCGCCAGGGGATCCATTG +
Preference number: 5 (lower is better)
Translates to: SNPVLLIQCWCYGLKVCVRTGLG*PPGDPL
Trigger: CAATGGATCCCCTGGCGGCAACCCGAGACCGGTTCT...GACACAAACCTTCAAACCATAGCACCAGCACTGGATCAGCAAGACTGGATTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR CAA 90 bp GTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGTGGGTTGCTACCTTGAACTCTaGGACTCAAGTGATCCTGCT +
Preference number: 5 (lower is better)
Translates to: VPQVWDWGGLLIANGHVGCYLEL*DSSDPA
Trigger: AGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGCA...ACCCACATGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CAA 90 bp GTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTTACTGATAGCAAATGGGCATGCTACCTTGAACTCTaGGACTCAAGTGATCCTGCT +
Preference number: 5 (lower is better)
Translates to: VSGSPGLGLGWVTDSKWACYLEL*DSSDPA
Trigger: AGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGCA...TGCCCATTTGCTATCAGTAACCCACCCCAGTCCCAGACCTGGGGAACCACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CAA 90 bp GCAGAGCTCCATGGCACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGATGACTGGAACACGTTaGTCTTTGAAAGCCCAAATC +
Preference number: 5 (lower is better)
Translates to: AELHGTAQNHEACHLSPQMTGTR*SLKAQI
Trigger: GATTTGGGCTTTCAAAGACAAACGTGTTCCAGTCAT...CTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS CCA 90 bp CTCTGCCTCTGTCTCTCTCAATCTCTCTGTCTCTGTTTGCCTCCCTaGTCAGATGGAGATGATCTTCCTTGCCCTGACATTTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: LCLCLSQSLCLCLPP*SDGDDLPCPDISQG
Trigger: GCCCTGAGAAATGTCAGGGCAAGGAAGATCATCTCCATCTGACCAGGGAGGCAAACAGAGACAGAGAGATTGAGAGAGACAGAGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS-3UTR CAA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCATCAAAGGAGCCTGCTTaGCGGCTGAATCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPSKEPA*RLNPNR
Trigger: CCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGA...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp CTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATGATCATCTCAAAGATGCTCACACCTGCATaGACTCCCACGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: LTPALTPTSSLPSMIISKMLTPA*TPTSSL
Trigger: AAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCAT...CTTTGAGATGATCATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR CAA 90 bp TTCATGCTCACACCTGCATTGACTCCCACGAGCAGTCTTCCCAGCATGATCATCATGCTCACACCTGCATaGACTCCCACGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: FMLTPALTPTSSLPSMIIMLTPA*TPTSSL
Trigger: AAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCAT...GATGATCATGCTGGGAAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000436643.5
ENST00000625546.2
ENST00000627257.2
ENST00000630215.2
CDS-3UTR CAA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCATGGAAGGTCTTGCCTTaGGTCTCAGGAAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPWKVLP*VSGRNR
Trigger: CCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCCA...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTATCTCTTGGAAGGTCTaGCCTTTGGTCTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGAISWKV*PLVSGR
Trigger: CCTTCCTGAGACCAAAGGCAAGACCTTCCAAGAGAT...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp TCTGACCAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGAGTCTGTGTAATTCCTaGGAGATCTCTTGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: SDQLRQKAGQWFPRSGTGSLCNS*EISWKV
Trigger: GACCTTCCAAGAGATCTCCAAGGAATTACACAGACT...CCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTGGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS TCA 90 bp CTCAAAGGAGCCTGCTTTGCGGCTGAATCCAAACAGGATTGCTGCTaGCACCACAAAGATGTTATTCACCAGGAGGGACTTCTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: LKGACFAAESKQDCC*HHKDVIHQEGLLPS
Trigger: GCTGGGAAGAAGTCCCTCCTGGTGAATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000489322.5
ENST00000625546.2
ENST00000625663.2
ENST00000630215.2
CDS-3UTR CAA 90 bp CAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCCAATCTCTTGGAAGGTCTaGCCTTTGGTCTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: QAGLKLLVSKQSSHLGLPISWKV*PLVSGR
Trigger: CCTTCCTGAGACCAAAGGCAAGACCTTCCAAGAGAT...TGGGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp CCCTCTCAGACGAGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCCAACTGAAACTAGACTaGCCAAAGATGCTATTTGTG +
Preference number: 5 (lower is better)
Translates to: PSQTRSGLLVCIPIPTTTQLKLD*PKMLFV
Trigger: CACAAATAGCATCTTTGGCAAGTCTAGTTTCAGTTG...GGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCTCGTCTGAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CAA 90 bp GCAGAGCTCCATGGCACTGCCCAGAACCACGAGGCTTGTCACCTGTCTCCTCAGCAGCCTGTAATTATGTaGTTACTGATTTTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: AELHGTAQNHEACHLSPQQPVIM*LLIFCQ
Trigger: CTGACAGAAAATCAGTAACAACATAATTACAGGCTG...CTGAGGAGACAGGTGACAAGCCTCGTGGTTCTGGGCAGTGCCATGGAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CAA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCTGCTACCTTGAACTCTaGGACTCAAGTGATCCTGCT +
Preference number: 5 (lower is better)
Translates to: PRLVSNFWSQSNLPILASCYLEL*DSSDPA
Trigger: AGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGCA...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS TCA 90 bp GAGTTGTACCAGGTAGTTTGGACTCCCCAGACTCCAAACCTCAGGTaGGTGAAGGGAAGCCACATGGTTAGGAAAGACATGAGGAAGACA +
Preference number: 5 (lower is better)
Translates to: ELYQVVWTPQTPNLR*VKGSHMVRKDMRKT
Trigger: TGTCTTCCTCATGTCTTTCCTAACCATGTGGCTTCCCTTCACTCACCTGAGGTTTGGAGTCTGGGGAGTCCAAACTACCTGGTACAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440493.5
CDS-3UTR CAA 90 bp ACAGACACCAAGGAAAGGGACATAGAGGAAGTGGGACAAGGCCTCCATGATAAATGGAAGGTCTTGCCTTaGGTCTCAGGAAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: TDTKERDIEEVGQGLHDKWKVLP*VSGRNR
Trigger: CCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCCA...TTTATCATGGAGGCCTTGTCCCACTTCCTCTATGTCCCTTTCCTTGGTGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255830.7
ENST00000405340.6
ENST00000619667.3
ENST00000630215.2
CDS-3UTR CAA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTTGGAAGGTCTTGCCTTaGGTCTCAGGAAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLWKVLP*VSGRNR
Trigger: CCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCCA...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp CCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTGGCCTCCAGTCTGTGTAATTCCTaGGAGATCTCTTGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: PRLVSNFWSQSNLPILASSLCNS*EISWKV
Trigger: GACCTTCCAAGAGATCTCCAAGGAATTACACAGACT...GGAGGCCAAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp CGCTCACCATTGATTGCTAAGCACCTGGAGCCATGTCTGCACACAAAGGGTGCTAGTCTGTGTAATTCCTaGGAGATCTCTTGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: RSPLIAKHLEPCLHTKGASLCNS*EISWKV
Trigger: GACCTTCCAAGAGATCTCCAAGGAATTACACAGACT...AGCACCCTTTGTGTGCAGACATGGCTCCAGGTGCTTAGCAATCAATGGTGAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTAGAACCGGTCTCGGGTaGCCGCCAGGGGATCCATTG +
Preference number: 5 (lower is better)
Translates to: HELPQPACNYVVTDFLSVRTGLG*PPGDPL
Trigger: CAATGGATCCCCTGGCGGCAACCCGAGACCGGTTCT...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000618502.4
ENST00000619254.4
CDS-3UTR CAA 90 bp CAATTGAGGCAGAAAGCAGGTCAGTGGTTCCCCAGGTCTGGGACTGGGGTGGGTCAGCCTGTAATTATGTaGTTACTGATTTTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: QLRQKAGQWFPRSGTGVGQPVIM*LLIFCQ
Trigger: CTGACAGAAAATCAGTAACAACATAATTACAGGCTG...ACCCACCCCAGTCCCAGACCTGGGGAACCACTGACCTGCTTTCTGCCTCAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CAA 90 bp TCTCAGGAAGGAACAGGCCAGTGTAGATGGCCCCACAGACACAGACACCAAGGAATGACTGGAACACGTTaGTCTTTGAAAGCCCAAATC +
Preference number: 5 (lower is better)
Translates to: SQEGTGQCRWPHRHRHQGMTGTR*SLKAQI
Trigger: GATTTGGGCTTTCAAAGACAAACGTGTTCCAGTCAT...TCCTTGGTGTCTGTGTCTGTGGGGCCATCTACACTGGCCTGTTCCTTCCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS GCA 90 bp TTCTCTCTCTCTGCCTCTGTCTCTCTCAATCTCTCTGTCTCTGTTTaGCTCCCTGGTCAGATGGAGATGATCTTCCTTGCCCTGACATTT +
Preference number: 5 (lower is better)
Translates to: FSLSASVSLNLSVSV*LPGQMEMIFLALTF
Trigger: AAATGTCAGGGCAAGGAAGATCATCTCCATCTGACCAGGGAGGCAAACAGAGACAGAGAGATTGAGAGAGACAGAGGCAGAGAGAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS-3UTR CAA 90 bp GGCAGCAGAGATGTGGATAGAGGATTCGATGCCTTCATGCAAAGCAATAATGCTATGCTCACACCTGCATaGACTCCCACGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: GSRDVDRGFDAFMQSNNAMLTPA*TPTSSL
Trigger: AAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCAT...AGCATTATTGCTTTGCATGAAGGCATCGAATCCTCTATCCACATCTCTGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405847.5
ENST00000628119.2
CDS-3UTR CAA 90 bp AGGTCGGGCCTCCTGGTATGCATACCCATACCCACTACAACCTGTATTTATTTTATGCTCACACCTGCATaGACTCCCACGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: RSGLLVCIPIPTTTCIYFMLTPA*TPTSSL
Trigger: AAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCAT...AAAATAAATACAGGTTGTAGTGGGTATGGGTATGCATACCAGGAGGCCCGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CAA 90 bp TATGTGGCCCAGGCTGGTCTCAAACTTCTGGTCTCAAAGCAATCTTCCCATCTTATCTCTTGGAAGGTCTaGCCTTTGGTCTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: YVAQAGLKLLVSKQSSHLISWKV*PLVSGR
Trigger: CCTTCCTGAGACCAAAGGCAAGACCTTCCAAGAGAT...AAGATGGGAAGATTGCTTTGAGACCAGAAGTTTGAGACCAGCCTGGGCCACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp GATTACCACACAACTAACAACCGCCGTGAGCAGCTCGCAGCTCCCAGTCCCGATCAGCCTGTAATTATGTaGTTACTGATTTTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: DYHTTNNRREQLAAPSPDQPVIM*LLIFCQ
Trigger: CTGACAGAAAATCAGTAACAACATAATTACAGGCTG...ATCGGGACTGGGAGCTGCGAGCTGCTCACGGCGGTTGTTAGTTGTGTGGTAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CAA 90 bp GTCTTGCTGATCCAGTGCTGGTGCTATGGTTTGAAGGTTTGTGTCTCTTCCAAATGGTCTAATCCAGTCTaGCTGATCCAGTGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: VLLIQCWCYGLKVCVSSKWSNPV*LIQCWC
Trigger: GCACCAGCACTGGATCAGCAAGACTGGATTAGACCA...TTTGGAAGAGACACAAACCTTCAAACCATAGCACCAGCACTGGATCAGCAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403208.7
CDS-3UTR CAA 90 bp CATGATCATCTCAAAGGAGCCTGCTTTGCGGCTGAATCCAAACAGGATTGCTGCAGTCTGTGTAATTCCTaGGAGATCTCTTGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: HDHLKGACFAAESKQDCCSLCNS*EISWKV
Trigger: GACCTTCCAAGAGATCTCCAAGGAATTACACAGACT...GCAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGAGATGATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255830.7
ENST00000630215.2
CDS-3UTR CAA 90 bp ATCTTGATCACGGTGGTGTTTCCCAAGTGTATACACTCACCAAAACTATACTTAGGGCCAAGCCCTTGGTaGTGCACATCTATGCACGCC +
Preference number: 5 (lower is better)
Translates to: ILITVVFPKCIHSPKLYLGPSPW*CTSMHA
Trigger: GGCGTGCATAGATGTGCACAACCAAGGGCTTGGCCC...TAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAACACCACCGTGATCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611880.4
ENST00000618114.2
CDS-3UTR CAA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGCCCGCCTGGGGAAGTaGAGTCTGTGTAATTCCTTG +
Preference number: 5 (lower is better)
Translates to: SHELPQPACNYVVTDFLSARLGK*SLCNSL
Trigger: CAAGGAATTACACAGACTCAACTTCCCCAGGCGGGC...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp GGAATACTACTCAGCAATACAAAGGAGTCTCTCCTAATACGTGCAACAACATTCGCCCGCCTGGGGAAGTaGAGTCTGTGTAATTCCTTG +
Preference number: 5 (lower is better)
Translates to: GILLSNTKESLLIRATTFARLGK*SLCNSL
Trigger: CAAGGAATTACACAGACTCAACTTCCCCAGGCGGGC...GAATGTTGTTGCACGTATTAGGAGAGACTCCTTTGTATTGCTGAGTAGTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CAA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCATCAAAGGAGCCTGCTTaGCGGCTGAATCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: SHELPQPACNYVVTDFLSSKEPA*RLNPNR
Trigger: CCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGA...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAATGCTCACACCTGCATaGACTCCCACGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: SHELPQPACNYVVTDFLSMLTPA*TPTSSL
Trigger: AAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCAT...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp GGGAGACATTTAGGTGAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGATGCTCACACCTGCATaGACTCCCACGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: GRHLGEETLLLVSPKYSMMLTPA*TPTSSL
Trigger: AAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCAT...CATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTCACCTAAATGTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405847.5
ENST00000423972.5
ENST00000625546.2
ENST00000628119.2
CDS-3UTR CAA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTTGGAAGGTCTTGCCTTaGGTCTCAGGAAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: HELPQPACNYVVTDFLSVWKVLP*VSGRNR
Trigger: CCTGTTCCTTCCTGAGACCAAAGGCAAGACCTTCCA...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp TCCCAAAAACTTTATCTGGAGCCAAGCCAGACACAAATGTGTACATACAGTACGATCTCTTGGAAGGTCTaGCCTTTGGTCTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: SQKLYLEPSQTQMCTYSTISWKV*PLVSGR
Trigger: CCTTCCTGAGACCAAAGGCAAGACCTTCCAAGAGAT...CGTACTGTATGTACACATTTGTGTCTGGCTTGGCTCCAGATAAAGTTTTTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS GCA 90 bp AGGGGTCTCCTGAGAAAGCTGGTGGTGGAGGTGAGGGTAGTTTATTaGTTCAGTGTGACTTTATTAATTTCCCAAAGGAACTTGGTCAAT +
Preference number: 5 (lower is better)
Translates to: RGLLRKLVVEVRVVY*FSVTLLISQRNLVN
Trigger: ATTGACCAAGTTCCTTTGGGAAATTAATAAAGTCACACTGAAGCAATAAACTACCCTCACCTCCACCACCAGCTTTCTCAGGAGACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461809.5
ENST00000486907.1
ENST00000628520.2
ENST00000631328.1
CDS-3UTR CAA 90 bp CATTTAGGTGAAGAAACGCTTTTACTGGTATCTCCGAAATACTCAATGCATGTGTCAAAGGAGCCTGCTTaGCGGCTGAATCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: HLGEETLLLVSPKYSMHVSKEPA*RLNPNR
Trigger: CCTGTTTGGATTCAGCCGCAAAGCAGGCTCCTTTGA...CACATGCATTGAGTATTTCGGAGATACCAGTAAAAGCGTTTCTTCACCTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405847.5
ENST00000423972.5
ENST00000625546.2
ENST00000628119.2
CDS-3UTR CAA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTGCCCGCCTGGGGAAGTaGAGTCTGTGTAATTCCTTG +
Preference number: 5 (lower is better)
Translates to: MLLLIFCQLITFSLEYHAARLGK*SLCNSL
Trigger: CAAGGAATTACACAGACTCAACTTCCCCAGGCGGGC...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp CTCCTAATACGTGCAACAACATTCATGAATCCCAAAAACTTTATCTGGAGCCAATTATGCTGGGGGCACTaGGAGTTGAGGAACCACAGA +
Preference number: 5 (lower is better)
Translates to: LLIRATTFMNPKNFIWSQLCWGH*ELRNHR
Trigger: TCTGTGGTTCCTCAACTCCAAGTGCCCCCAGCATAA...TTGGCTCCAGATAAAGTTTTTGGGATTCATGAATGTTGTTGCACGTATTAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CAA 90 bp GGAATACTACTCAGCAATACAAAGGAGTCTCTCCTAATACGTGCAACAACATTCGGCAAATCTGACCAATaGAGGCAGAAAGCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: GILLSNTKESLLIRATTFGKSDQ*RQKAGQ
Trigger: CTGACCTGCTTTCTGCCTCAATTGGTCAGATTTGCC...GAATGTTGTTGCACGTATTAGGAGAGACTCCTTTGTATTGCTGAGTAGTATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CAA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTGGCAAATCTGACCAATaGAGGCAGAAAGCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: HELPQPACNYVVTDFLSVGKSDQ*RQKAGQ
Trigger: CTGACCTGCTTTCTGCCTCAATTGGTCAGATTTGCC...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS TCA 90 bp ATCAGTTCCAAGACGAGGCAGAGGACGGCGATGAGGCTGGAGAAATaGAAAGCTATGTTATATAGTGCAGTAACACGGAAGAAAGAAAAT +
Preference number: 5 (lower is better)
Translates to: ISSKTRQRTAMRLEK*KAMLYSAVTRKKEN
Trigger: ATTTTCTTTCTTCCGTGTTACTGCACTATATAACATAGCTTTTCATTTCTCCAGCCTCATCGCCGTCCTCTGCCTCGTCTTGGAACTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS-3UTR CAA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTATGCTCACACCTGCATaGACTCCCACGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: MLLLIFCQLITFSLEYHAMLTPA*TPTSSL
Trigger: AAGACTGCTCGTGGGAGTCAATGCAGGTGTGAGCAT...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTTTATGCTGGGGGCACTaGGAGTTGAGGAACCACAGA +
Preference number: 5 (lower is better)
Translates to: MLLLIFCQLITFSLEYHALCWGH*ELRNHR
Trigger: TCTGTGGTTCCTCAACTCCAAGTGCCCCCAGCATAA...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CAA 90 bp CATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCAGTTTGCTACCTTGAACTCTaGGACTCAAGTGATCCTGCT +
Preference number: 5 (lower is better)
Translates to: HELPQPACNYVVTDFLSVCYLEL*DSSDPA
Trigger: AGCAGGATCACTTGAGTCCAAGAGTTCAAGGTAGCA...AACTGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp ATCTTGATCACGGTGGTGTTTCCCAAGTGTATACACTCACCAAAACTATACTTAGGCAAATCTGACCAATaGAGGCAGAAAGCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: ILITVVFPKCIHSPKLYLGKSDQ*RQKAGQ
Trigger: CTGACCTGCTTTCTGCCTCAATTGGTCAGATTTGCC...TAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAACACCACCGTGATCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS TCA 90 bp CTGGTGCTATGGTTTGAAGGTTTGTGTCTCTTCCAAAATTCAGGTTaGAATTTAATTTCCAATGCAACGGTATTTAGAGGTGGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: LVLWFEGLCLFQNSG*NLISNATVFRGGPS
Trigger: GGAAGGCCCACCTCTAAATACCGTTGCATTGGAAATTAAATTTCAACCTGAATTTTGGAAGAGACACAAACCTTCAAACCATAGCACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403208.7
ENST00000627998.2
CDS-3UTR CAA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTAGTCTGTGTAATTCCTaGGAGATCTCTTGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: MLLLIFCQLITFSLEYHASLCNS*EISWKV
Trigger: GACCTTCCAAGAGATCTCCAAGGAATTACACAGACT...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp AAGCCAGACACAAATGTGTACATACAGTACGGAATGACTTCAGATTCTGAAAAAAGTCTGTGTAATTCCTaGGAGATCTCTTGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: KPDTNVYIQYGMTSDSEKSLCNS*EISWKV
Trigger: GACCTTCCAAGAGATCTCCAAGGAATTACACAGACT...TTTTTCAGAATCTGAAGTCATTCCGTACTGTATGTACACATTTGTGTCTGGCTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CAA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCACAACTGAAACTAGACTaGCCAAAGATGCTATTTGTG +
Preference number: 5 (lower is better)
Translates to: SHELPQPACNYVVTDFLSQLKLD*PKMLFV
Trigger: CACAAATAGCATCTTTGGCAAGTCTAGTTTCAGTTG...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS-3UTR CAA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTGGAACACGTTTGTCTTaGAAAGCCCAAATCTTCACC +
Preference number: 5 (lower is better)
Translates to: MLLLIFCQLITFSLEYHAGTRLS*KAQIFT
Trigger: GGTGAAGATTTGGGCTTTCAAAGACAAACGTGTTCC...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS-3UTR CAA 90 bp AGTCATGAGCTGCCACAACCAGCCTGTAATTATGTTGTTACTGATTTTCTGTCACAGCCTGTAATTATGTaGTTACTGATTTTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: SHELPQPACNYVVTDFLSQPVIM*LLIFCQ
Trigger: CTGACAGAAAATCAGTAACAACATAATTACAGGCTG...TGACAGAAAATCAGTAACAACATAATTACAGGCTGGTTGTGGCAGCTCATGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS-3UTR CAA 90 bp ATCTTGATCACGGTGGTGTTTCCCAAGTGTATACACTCACCAAAACTATACTTACAGCCTGTAATTATGTaGTTACTGATTTTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: ILITVVFPKCIHSPKLYLQPVIM*LLIFCQ
Trigger: CTGACAGAAAATCAGTAACAACATAATTACAGGCTG...TAAGTATAGTTTTGGTGAGTGTATACACTTGGGAAACACCACCGTGATCAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
CDS-3UTR CAA 90 bp ATGTTGTTACTGATTTTCTGTCAGTTAATTACCTTTAGCCTGGAATACCACGCTCAGCCTGTAATTATGTaGTTACTGATTTTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: MLLLIFCQLITFSLEYHAQPVIM*LLIFCQ
Trigger: CTGACAGAAAATCAGTAACAACATAATTACAGGCTG...AGCGTGGTATTCCAGGCTAAAGGTAATTAACTGACAGAAAATCAGTAACAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000405340.6
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
CDS GCA 72 bp CCGCAACCCTGCGCGATTCCCTGCGCCGGTCGCCACTaGCGGCCGCCAGAACCTCGGAGGCCACTGCCCCTG +
Preference number: 6 (lower is better)
Translates to: PQPCAIPCAGRH*RPPEPRRPLPL
Trigger: CAGGGGCAGTGGCCTCCGAGGTTCTGGCGGCCGGCAGTGGCGACCGGCGCAGGGAATCGCGCAGGGTTGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000473740.5
ENST00000611880.4
ENST00000618114.2
ENST00000630945.2
CDS GCA 72 bp GTCGCCACTGCCGGCCGCCAGAACCTCGGAGGCCACTaGCCCTGGGCGTTCTCCGGAGGGCCAAGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: VATAGRQNLGGH*PWAFSGGPSPW
Trigger: CCAAGGGCTTGGCCCTCCGGAGAACGCCCAGGGGCAGTGGCCTCCGAGGTTCTGGCGGCCGGCAGTGGCGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000473740.5
ENST00000611880.4
ENST00000618114.2
ENST00000630945.2
CDS CCA 72 bp ACTGCCGGCCGCCAGAACCTCGGAGGCCACTGCCCCTaGGCGTTCTCCGGAGGGCCAAGCCCTTGGTTGTGC +
Preference number: 6 (lower is better)
Translates to: TAGRQNLGGHCP*AFSGGPSPWLC
Trigger: GCACAACCAAGGGCTTGGCCCTCCGGAGAACGCCCAGGGGCAGTGGCCTCCGAGGTTCTGGCGGCCGGCAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000473740.5
ENST00000611880.4
ENST00000618114.2
ENST00000630945.2
CDS TCA 72 bp ATCGCAGGAGGGCGTGGAGCATTCGAAAGAGGGGCCTaGGCGGAGGTCTTGCTGTCCCAGGGAGACCCCGGC +
Preference number: 6 (lower is better)
Translates to: IAGGRGAFERGA*AEVLLSQGDPG
Trigger: GCCGGGGTCTCCCTGGGACAGCAAGACCTCCGCTCAGGCCCCTCTTTCGAATGCTCCACGCCCTCCTGCGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000405340.6
ENST00000436643.5
ENST00000491948.5
ENST00000619667.3
ENST00000627257.2
ENST00000631313.2
CDS GCA 72 bp GGAGAACCGGTCTCGGGTTGCCGCCAGGGGATCCATTaGGTGAGAGGCAGGTCCGACTTATGCTGGGGGCAC +
Preference number: 6 (lower is better)
Translates to: GEPVSGCRQGIH*VRGRSDLCWGH
Trigger: GTGCCCCCAGCATAAGTCGGACCTGCCTCTCACGCAATGGATCCCCTGGCGGCAACCCGAGACCGGTTCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS GCA 72 bp CTTGGCGGAATGCGGGTAGGAGAACCGGTCTCGGGTTaGCGCCAGGGGATCCATTGCGTGAGAGGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: LGGMRVGEPVSG*RQGIHCVRGRS
Trigger: GGACCTGCCTCTCACGCAATGGATCCCCTGGCGGCAACCCGAGACCGGTTCTCCTACCCGCATTCCGCCAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000403208.7
ENST00000618502.4
ENST00000619254.4
ENST00000627998.2
CDS CCA 72 bp CACTGCCCCTGGGCGTTCTCCGGAGGGCCAAGCCCTTaGTTGTGCACATCTATGCACGCCCCACCTACACCC +
Preference number: 6 (lower is better)
Translates to: HCPWAFSGGPSP*LCTSMHAPPTP
Trigger: GGGTGTAGGTGGGGCGTGCATAGATGTGCACAACCAAGGGCTTGGCCCTCCGGAGAACGCCCAGGGGCAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000473740.5
ENST00000611880.4
ENST00000618114.2
ENST00000630945.2
CDS CCA 72 bp CCTGCATTCGCCCTCGCAAGTGCCAGCAAGCGACTCTaGTCGCCGCGCTCCCAAGTCCTCCCCCGAAATTCC +
Preference number: 6 (lower is better)
Translates to: PAFALASASKRL*SPRSQVLPRNS
Trigger: GGAATTTCGGGGGAGGACTTGGGAGCGCGGCGACCAGAGTCGCTTGCTGGCACTTGCGAGGGCGAATGCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000473740.5
ENST00000611880.4
ENST00000618114.2
ENST00000630945.2
CDS TCA 72 bp AACCGGTCTCGGGTTGCCGCCAGGGGATCCATTGCGTaGGAGGCAGGTCCGACTTATGCTGGGGGCACTTGG +
Preference number: 6 (lower is better)
Translates to: NRSRVAARGSIA*EAGPTYAGGTW
Trigger: CCAAGTGCCCCCAGCATAAGTCGGACCTGCCTCTCACGCAATGGATCCCCTGGCGGCAACCCGAGACCGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS GCA 72 bp GGGAGCTCTGGTCCAAGGTCATCTCGGCCAAGCCCCTaGATTCGCCCTCGCAAGTGCCAGCAAGCGACTCTG +
Preference number: 6 (lower is better)
Translates to: GSSGPRSSRPSP*IRPRKCQQATL
Trigger: CAGAGTCGCTTGCTGGCACTTGCGAGGGCGAATGCAGGGGCTTGGCCGAGATGACCTTGGACCAGAGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000473740.5
ENST00000492516.1
ENST00000611880.4
ENST00000618114.2
ENST00000629525.1
ENST00000630945.2
CDS GCA 72 bp CCCAGAAGCCCCGGCATGAGGTGGTCTCTGAGGGCCTaGAGGGGACATTGCATTCACACCCACCCACTGTGC +
Preference number: 6 (lower is better)
Translates to: PRSPGMRWSLRA*RGHCIHTHPLC
Trigger: GCACAGTGGGTGGGTGTGAATGCAATGTCCCCTGCAGGCCCTCAGAGACCACCTCATGCCGGGGCTTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486907.1
ENST00000489322.5
ENST00000625663.2
ENST00000631328.1
CDS CCA 72 bp AGGCAGCAGGCCTGGCCATCTGGTCAAACAGCTCTGTaGCCAGGATCCCCGTCACTCCGGCTAGAAGGAGGG +
Preference number: 6 (lower is better)
Translates to: RQQAWPSGQTAL*PGSPSLRLEGG
Trigger: CCCTCCTTCTAGCCGGAGTGACGGGGATCCTGGCCACAGAGCTGTTTGACCAGATGGCCAGGCCTGCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486907.1
ENST00000489322.5
ENST00000625663.2
ENST00000631328.1
CDS CAA 72 bp AGGAGAACCGGTCTCGGGTTGCCGCCAGGGGATCCATaGCGTGAGAGGCAGGTCCGACTTATGCTGGGGGCA +
Preference number: 6 (lower is better)
Translates to: RRTGLGLPPGDP*RERQVRLMLGA
Trigger: TGCCCCCAGCATAAGTCGGACCTGCCTCTCACGCAATGGATCCCCTGGCGGCAACCCGAGACCGGTTCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS CAA 72 bp ACTTGGCGGAATGCGGGTAGGAGAACCGGTCTCGGGTaGCCGCCAGGGGATCCATTGCGTGAGAGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: TWRNAGRRTGLG*PPGDPLRERQV
Trigger: GACCTGCCTCTCACGCAATGGATCCCCTGGCGGCAACCCGAGACCGGTTCTCCTACCCGCATTCCGCCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000403208.7
ENST00000618502.4
ENST00000619254.4
ENST00000627998.2
CDS CAA 90 bp GAGCGAGAGACTTGGCGGAATGCGGGTAGGAGAACCGGTCTCGGGTaGCCGCCAGGGGATCCATTGCGTGAGAGGCAGGTCCGACTTATG +
Preference number: 6 (lower is better)
Translates to: ERETWRNAGRRTGLG*PPGDPLRERQVRLM
Trigger: CATAAGTCGGACCTGCCTCTCACGCAATGGATCCCCTGGCGGCAACCCGAGACCGGTTCTCCTACCCGCATTCCGCCAAGTCTCTCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345044.10
ENST00000403208.7
ENST00000618502.4
ENST00000627998.2
CDS TCA 72 bp CATCCACCCCAGCTACCTGCAGGCACAGGGCCACAGTaGAGATGCTCCCCCAGCAGGTCATCAGGCTGTACC +
Preference number: 6 (lower is better)
Translates to: HPPQLPAGTGPQ*RCSPSRSSGCT
Trigger: GGTACAGCCTGATGACCTGCTGGGGGAGCATCTTCACTGTGGCCCTGTGCCTGCAGGTAGCTGGGGTGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000461809.5
ENST00000486907.1
ENST00000489322.5
ENST00000625663.2
ENST00000628520.2
ENST00000631328.1
CDS GCA 72 bp GTGGAGCATTCGAAAGAGGGGCCTGAGCGGAGGTCTTaGTGTCCCAGGGAGACCCCGGCTGCCATTAGCAAG +
Preference number: 6 (lower is better)
Translates to: VEHSKEGPERRS*CPRETPAAISK
Trigger: CTTGCTAATGGCAGCCGGGGTCTCCCTGGGACAGCAAGACCTCCGCTCAGGCCCCTCTTTCGAATGCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000405340.6
ENST00000436643.5
ENST00000491948.5
ENST00000619667.3
ENST00000627257.2
ENST00000631313.2
CDS CCA 72 bp GCTCTCATCTGTGCGTCCTGGGCAGAGCGAGAGACTTaGCGGAATGCGGGTAGGAGAACCGGTCTCGGGTTG +
Preference number: 6 (lower is better)
Translates to: ALICASWAERET*RNAGRRTGLGL
Trigger: CAACCCGAGACCGGTTCTCCTACCCGCATTCCGCCAAGTCTCTCGCTCTGCCCAGGACGCACAGATGAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345044.10
ENST00000398356.6
ENST00000403208.7
ENST00000618502.4
ENST00000619254.4
ENST00000627998.2
CDS CAA 90 bp AATGCGGGTAGGAGAACCGGTCTCGGGTTGCCGCCAGGGGATCCATaGCGTGAGAGGCAGGTCCGACTTATGCTGGGGGCACTTGGAGTT +
Preference number: 6 (lower is better)
Translates to: NAGRRTGLGLPPGDP*RERQVRLMLGALGV
Trigger: AACTCCAAGTGCCCCCAGCATAAGTCGGACCTGCCTCTCACGCAATGGATCCCCTGGCGGCAACCCGAGACCGGTTCTCCTACCCGCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS TCA 72 bp CATCCCTGCTCCTGGCTCTGGGCTCGGCCAATAGGATaGGGCTGCAGTGAGGGCGTACCATGTTCCAGCCTA +
Preference number: 6 (lower is better)
Translates to: HPCSWLWARPIG*GCSEGVPCSSL
Trigger: TAGGCTGGAACATGGTACGCCCTCACTGCAGCCTCATCCTATTGGCCGAGCCCAGAGCCAGGAGCAGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS GCA 72 bp CGTAAGGACGGCTCCAGTTCATCCTCCATCCGCCTCTaGCGCAGCACTGAGGCTGAAAAGCCGCTCACTCCT +
Preference number: 6 (lower is better)
Translates to: RKDGSSSSSIRL*RSTEAEKPLTP
Trigger: AGGAGTGAGCGGCTTTTCAGCCTCAGTGCTGCGGCAGAGGCGGATGGAGGATGAACTGGAGCCGTCCTTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000398356.6
ENST00000405286.6
ENST00000423972.5
ENST00000440493.5
ENST00000467660.5
ENST00000473740.5
ENST00000492516.1
ENST00000611880.4
ENST00000618114.2
ENST00000619254.4
ENST00000625546.2
ENST00000629072.2
ENST00000629525.1
ENST00000630489.2
ENST00000630945.2
CDS GCA 72 bp GCTTCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAGGGGATACAGAGACAC +
Preference number: 6 (lower is better)
Translates to: ASQRDGQGTCKQ*SKEASQGIQRH
Trigger: GTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436643.5
ENST00000627257.2
CDS GCA 72 bp CCCAGGCACCCATCACTCCTTCTATGTGATGATGGATaGCCAGAGCCCCTTGGGCCCACTCACCAGGGCCAA +
Preference number: 6 (lower is better)
Translates to: PRHPSLLLCDDG*PEPLGPTHQGQ
Trigger: TTGGCCCTGGTGAGTGGGCCCAAGGGGCTCTGGGCATCCATCATCACATAGAAGGAGTGATGGGTGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486907.1
ENST00000489322.5
ENST00000625663.2
ENST00000631328.1
CDS CCA 72 bp CATCTCAGTCTTCGGAGCGCTCTCATCTGTGCGTCCTaGGCAGAGCGAGAGACTTGGCGGAATGCGGGTAGG +
Preference number: 6 (lower is better)
Translates to: HLSLRSALICAS*AERETWRNAGR
Trigger: CCTACCCGCATTCCGCCAAGTCTCTCGCTCTGCCCAGGACGCACAGATGAGAGCGCTCCGAAGACTGAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398356.6
ENST00000619254.4
CDS CCA 72 bp GTGCCACCTAGTGGATGCCTGGCTGAAGCCCCTCAGTaGGCAGCTGTTAGCCAGTACCCACTCAGACAGGGA +
Preference number: 6 (lower is better)
Translates to: VPPSGCLAEAPQ*AAVSQYPLRQG
Trigger: TCCCTGTCTGAGTGGGTACTGGCTAACAGCTGCCCACTGAGGGGCTTCAGCCAGGCATCCACTAGGTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492516.1
ENST00000629525.1
CDS GCA 72 bp TCTTCCCAGCGTGATGGCCAAGGGACCTGCAAGCAGTaGTCCAAAGAGGCCTCCCAGGGGATACAGAGACAC +
Preference number: 6 (lower is better)
Translates to: SSQRDGQGTCKQ*SKEASQGIQRH
Trigger: GTGTCTCTGTATCCCCTGGGAGGCCTCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255830.7
ENST00000423972.5
ENST00000489322.5
ENST00000625546.2
ENST00000625663.2
ENST00000630215.2
CDS GCA 72 bp GCTGGTCTCCAACTCCTGATCCCACCTCAGCACTATTaGCTGGGCTGGAGTGCAATGGCACCATCTCGGCTC +
Preference number: 6 (lower is better)
Translates to: AGLQLLIPPQHY*LGWSAMAPSRL
Trigger: GAGCCGAGATGGTGCCATTGCACTCCAGCCCAGGCAATAGTGCTGAGGTGGGATCAGGAGTTGGAGACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000461809.5
ENST00000473357.1
ENST00000486907.1
ENST00000628101.1
ENST00000628520.2
ENST00000631328.1
CDS CCA 72 bp CTCTGGACTAAATGTCTGCGGGTCTCTGTCTCTCGCTaGTCTGACCTCAGCCGCAACCCTGCGCGATTCCCT +
Preference number: 6 (lower is better)
Translates to: LWTKCLRVSVSR*SDLSRNPARFP
Trigger: AGGGAATCGCGCAGGGTTGCGGCTGAGGTCAGACCAGCGAGAGACAGAGACCCGCAGACATTTAGTCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000473740.5
ENST00000611880.4
ENST00000618114.2
ENST00000630945.2
CDS CCA 72 bp CTCTGGCCCCTCGTCCCCCTCCTTTGCTACAGTCTCTaGACTAAATGTCTGCGGGTCTCTGTCTCTCGCTGG +
Preference number: 6 (lower is better)
Translates to: LWPLVPLLCYSL*TKCLRVSVSRW
Trigger: CCAGCGAGAGACAGAGACCCGCAGACATTTAGTCCAGAGACTGTAGCAAAGGAGGGGGACGAGGGGCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000473740.5
ENST00000611880.4
ENST00000618114.2
ENST00000630945.2
CDS CAA 90 bp GGCACCCATCACTCCTTCTATGTGATGATGGATGCCCAGAGCCCCTaGGGCCCACTCACCAGGGCCAATGCCAAAGCTGAGGATGAAGGC +
Preference number: 6 (lower is better)
Translates to: GTHHSFYVMMDAQSP*GPLTRANAKAEDEG
Trigger: GCCTTCATCCTCAGCTTTGGCATTGGCCCTGGTGAGTGGGCCCAAGGGGCTCTGGGCATCCATCATCACATAGAAGGAGTGATGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486907.1
ENST00000489322.5
ENST00000625663.2
ENST00000631328.1
CDS GCA 72 bp CAGGGGATCCATTGCGTGAGAGGCAGGTCCGACTTATaGTGGGGGCACTTGGAGTTGAGGAACCACAGAGTC +
Preference number: 6 (lower is better)
Translates to: QGIHCVRGRSDL*WGHLELRNHRV
Trigger: GACTCTGTGGTTCCTCAACTCCAAGTGCCCCCAGCATAAGTCGGACCTGCCTCTCACGCAATGGATCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS GCA 72 bp CTCACTCCTTACTCGGCTAAGCCCCAAGCTCATCTCTaGAGGCCGGAAGGGAGCTCTGGTCCAAGGTCATCT +
Preference number: 6 (lower is better)
Translates to: LTPYSAKPQAHL*RPEGSSGPRSS
Trigger: AGATGACCTTGGACCAGAGCTCCCTTCCGGCCTGCAGAGATGAGCTTGGGGCTTAGCCGAGTAAGGAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000473740.5
ENST00000492516.1
ENST00000611880.4
ENST00000618114.2
ENST00000629525.1
ENST00000630945.2
CDS CCA 72 bp GGGATCCATTGCGTGAGAGGCAGGTCCGACTTATGCTaGGGGCACTTGGAGTTGAGGAACCACAGAGTCCAC +
Preference number: 6 (lower is better)
Translates to: GIHCVRGRSDLC*GHLELRNHRVH
Trigger: GTGGACTCTGTGGTTCCTCAACTCCAAGTGCCCCCAGCATAAGTCGGACCTGCCTCTCACGCAATGGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345044.10
ENST00000618502.4
CDS CCA 72 bp TGGACAGCCAAAGGGGCCCAGCTAAGCCACCCTCACTaGGACTATTCTAGATCAGCCAGCCAATGCCCAGCT +
Preference number: 6 (lower is better)
Translates to: WTAKGAQLSHPH*DYSRSASQCPA
Trigger: AGCTGGGCATTGGCTGGCTGATCTAGAATAGTCCCAGTGAGGGTGGCTTAGCTGGGCCCCTTTGGCTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS TCA 72 bp TCAGGGGGTATGCAGGAAGCACTTACCTTCCCAGCGTaGTGGCCAAGGGACCTGCAAGCAGTGCTCCAAAGA +
Preference number: 6 (lower is better)
Translates to: SGGMQEALTFPA*WPRDLQAVLQR
Trigger: TCTTTGGAGCACTGCTTGCAGGTCCCTTGGCCATCACGCTGGGAAGGTAAGTGCTTCCTGCATACCCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491948.5
ENST00000631313.2
CDS GCA 72 bp TCCCCCTCCTTTGCTACAGTCTCTGGACTAAATGTCTaGGGGTCTCTGTCTCTCGCTGGTCTGACCTCAGCC +
Preference number: 6 (lower is better)
Translates to: SPSFATVSGLNV*GSLSLAGLTSA
Trigger: GGCTGAGGTCAGACCAGCGAGAGACAGAGACCCGCAGACATTTAGTCCAGAGACTGTAGCAAAGGAGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000473740.5
ENST00000611880.4
ENST00000618114.2
ENST00000630945.2
CDS CCA 72 bp CAAACTTGTGGCAGAAAGTGCCACCTAGTGGATGCCTaGCTGAAGCCCCTCAGTGGGCAGCTGTTAGCCAGT +
Preference number: 6 (lower is better)
Translates to: QTCGRKCHLVDA*LKPLSGQLLAS
Trigger: ACTGGCTAACAGCTGCCCACTGAGGGGCTTCAGCCAGGCATCCACTAGGTGGCACTTTCTGCCACAAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492516.1
ENST00000629525.1
CDS GCA 72 bp CTAGATCAGCCAGCCAATGCCCAGCTGAGCTGCAGTTaGAGGAATGACCAAGATCAGCAGAGCCATCAGCCA +
Preference number: 6 (lower is better)
Translates to: LDQPANAQLSCS*RNDQDQQSHQP
Trigger: TGGCTGATGGCTCTGCTGATCTTGGTCATTCCTGCAACTGCAGCTCAGCTGGGCATTGGCTGGCTGATCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS GCA 72 bp CTGCAGCGCTCCTCATTAAAGGGCATTCAGGGGGTATaGAGGAAGCACTTACCTTCCCAGCGTGATGGCCAA +
Preference number: 6 (lower is better)
Translates to: LQRSSLKGIQGV*RKHLPSQRDGQ
Trigger: TTGGCCATCACGCTGGGAAGGTAAGTGCTTCCTGCATACCCCCTGAATGCCCTTTAATGAGGAGCGCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491948.5
ENST00000631313.2
CDS GCA 72 bp TGTTTGCCTCCCTGGTCAGATGGAGATGATCTTCCTTaGCCTGACATTTCTCAGGGCTGTTGCGGTGTTGCC +
Preference number: 6 (lower is better)
Translates to: CLPPWSDGDDLP*PDISQGCCGVA
Trigger: GGCAACACCGCAACAGCCCTGAGAAATGTCAGGGCAAGGAAGATCATCTCCATCTGACCAGGGAGGCAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS TCA 72 bp TCACTGTCAAGACTGGGGATTAGGCTCAGGGAGAGGTaGAATGACTTGCTCACAGCGTTAGCCACAGGTCAG +
Preference number: 6 (lower is better)
Translates to: SLSRLGIRLRER*NDLLTALATGQ
Trigger: CTGACCTGTGGCTAACGCTGTGAGCAAGTCATTTCACCTCTCCCTGAGCCTAATCCCCAGTCTTGACAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440493.5
CDS CCA 72 bp ATGAGAATTCATACCATTCTAGATCGCAGGAGGGCGTaGAGCATTCGAAAGAGGGGCCTGAGCGGAGGTCTT +
Preference number: 6 (lower is better)
Translates to: MRIHTILDRRRA*SIRKRGLSGGL
Trigger: AAGACCTCCGCTCAGGCCCCTCTTTCGAATGCTCCACGCCCTCCTGCGATCTAGAATGGTATGAATTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405340.6
ENST00000619667.3
CDS TCA 72 bp CAGGTAGTTTGGACTCCCCAGACTCCAAACCTCAGGTaGGTGAAGGGAAGCCACATGGTTAGGAAAGACATG +
Preference number: 6 (lower is better)
Translates to: QVVWTPQTPNLR*VKGSHMVRKDM
Trigger: CATGTCTTTCCTAACCATGTGGCTTCCCTTCACTCACCTGAGGTTTGGAGTCTGGGGAGTCCAAACTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440493.5
CDS CAA 72 bp CTCTGCCTCTGTCTCTCTCAATCTCTCTGTCTCTGTTaGCCTCCCTGGTCAGATGGAGATGATCTTCCTTGC +
Preference number: 6 (lower is better)
Translates to: LCLCLSQSLCLC*PPWSDGDDLPC
Trigger: GCAAGGAAGATCATCTCCATCTGACCAGGGAGGCAAACAGAGACAGAGAGATTGAGAGAGACAGAGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS TCA 72 bp GCCTGCTTTGCGGCTGAATCCAAACAGGATTGCTGCTaGCACCACAAAGATGTTATTCACCAGGAGGGACTT +
Preference number: 6 (lower is better)
Translates to: ACFAAESKQDCC*HHKDVIHQEGL
Trigger: AAGTCCCTCCTGGTGAATAACATCTTTGTGGTGTCAGCAGCAATCCTGTTTGGATTCAGCCGCAAAGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 28 transcripts:
ENST00000255830.7
ENST00000316185.8
ENST00000345044.10
ENST00000398356.6
ENST00000405286.6
ENST00000405340.6
ENST00000405847.5
ENST00000423972.5
ENST00000436643.5
ENST00000461809.5
ENST00000467660.5
ENST00000473740.5
ENST00000489322.5
ENST00000611880.4
ENST00000618114.2
ENST00000618502.4
ENST00000619254.4
ENST00000619667.3
ENST00000620942.4
ENST00000625546.2
ENST00000625663.2
ENST00000627257.2
ENST00000628119.2
ENST00000628520.2
ENST00000629072.2
ENST00000630215.2
ENST00000630489.2
ENST00000630945.2
CDS TCA 72 bp CACCATTCCTTTCCTTCTTGGCTCACTCTCTGTCTCTaGGTCTGTCTGTGTGTGTGTGTGTCTCTCTCTCTG +
Preference number: 6 (lower is better)
Translates to: HHSFPSWLTLCL*VCLCVCVSLSL
Trigger: CAGAGAGAGAGACACACACACACACAGACAGACTCAGAGACAGAGAGTGAGCCAAGAAGGAAAGGAATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS CCA 72 bp GGAGTTGGTGCTACCGTAACAAAGACCTGTGAAATATaGTATCAGTTCCAAGACGAGGCAGAGGACGGCGAT +
Preference number: 6 (lower is better)
Translates to: GVGATVTKTCEI*YQFQDEAEDGD
Trigger: ATCGCCGTCCTCTGCCTCGTCTTGGAACTGATACCATATTTCACAGGTCTTTGTTACGGTAGCACCAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS CAA 90 bp TTTCTCTCTCTCTGCCTCTGTCTCTCTCAATCTCTCTGTCTCTGTTaGCCTCCCTGGTCAGATGGAGATGATCTTCCTTGCCCTGACATT +
Preference number: 6 (lower is better)
Translates to: FLSLCLCLSQSLCLC*PPWSDGDDLPCPDI
Trigger: AATGTCAGGGCAAGGAAGATCATCTCCATCTGACCAGGGAGGCAAACAGAGACAGAGAGATTGAGAGAGACAGAGGCAGAGAGAGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS CCA 72 bp TGTCTCTCTCAATCTCTCTGTCTCTGTTTGCCTCCCTaGTCAGATGGAGATGATCTTCCTTGCCCTGACATT +
Preference number: 6 (lower is better)
Translates to: CLSQSLCLCLPP*SDGDDLPCPDI
Trigger: AATGTCAGGGCAAGGAAGATCATCTCCATCTGACCAGGGAGGCAAACAGAGACAGAGAGATTGAGAGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS TCA 72 bp AAGACGAGGCAGAGGACGGCGATGAGGCTGGAGAAATaGAAAGCTATGTTATATAGTGCAGTAACACGGAAG +
Preference number: 6 (lower is better)
Translates to: KTRQRTAMRLEK*KAMLYSAVTRK
Trigger: CTTCCGTGTTACTGCACTATATAACATAGCTTTTCATTTCTCCAGCCTCATCGCCGTCCTCTGCCTCGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS TCA 72 bp ATGGTATCAGTTCCAAGACGAGGCAGAGGACGGCGATaGGGCTGGAGAAATGAAAAGCTATGTTATATAGTG +
Preference number: 6 (lower is better)
Translates to: MVSVPRRGRGRR*GWRNEKLCYIV
Trigger: CACTATATAACATAGCTTTTCATTTCTCCAGCCTCATCGCCGTCCTCTGCCTCGTCTTGGAACTGATACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS CAA 90 bp AAGGGGTCTCCTGAGAAAGCTGGTGGTGGAGGTGAGGGTAGTTTATaGCTTCAGTGTGACTTTATTAATTTCCCAAAGGAACTTGGTCAA +
Preference number: 6 (lower is better)
Translates to: KGSPEKAGGGGEGSL*LQCDFINFPKELGQ
Trigger: TTGACCAAGTTCCTTTGGGAAATTAATAAAGTCACACTGAAGCAATAAACTACCCTCACCTCCACCACCAGCTTTCTCAGGAGACCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461809.5
ENST00000486907.1
ENST00000628520.2
ENST00000631328.1
CDS TCA 72 bp GAAACGCAGGGTTCTGCGGACATATCAGACAGGACATaGCTATTGCAGCACATTATCAAACCCAATTCTTCA +
Preference number: 6 (lower is better)
Translates to: ETQGSADISDRT*LLQHIIKPNSS
Trigger: TGAAGAATTGGGTTTGATAATGTGCTGCAATAGTCATGTCCTGTCTGATATGTCCGCAGAACCCTGCGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS CCA 72 bp AGCAAAGATCAAATCCAGAGCACTGCCAGGAAGCCATaGACTCATAGTAAAGATCAAATCAAGGGTATAGCT +
Preference number: 6 (lower is better)
Translates to: SKDQIQSTARKP*THSKDQIKGIA
Trigger: AGCTATACCCTTGATTTGATCTTTACTATGAGTCCATGGCTTCCTGGCAGTGCTCTGGATTTGATCTTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS CAA 72 bp CCTGAGAAAGCTGGTGGTGGAGGTGAGGGTAGTTTATaGCTTCAGTGTGACTTTATTAATTTCCCAAAGGAA +
Preference number: 6 (lower is better)
Translates to: PEKAGGGGEGSL*LQCDFINFPKE
Trigger: TTCCTTTGGGAAATTAATAAAGTCACACTGAAGCAATAAACTACCCTCACCTCCACCACCAGCTTTCTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461809.5
ENST00000486907.1
ENST00000628520.2
ENST00000631328.1
CDS CAA 72 bp CATCTATTAGTCAGCAATAGAAAGCTGATCAATAAATaGGCACCAGGAGTTGGTGCTACCGTAACAAAGACC +
Preference number: 6 (lower is better)
Translates to: HLLVSNRKLINK*APGVGATVTKT
Trigger: GGTCTTTGTTACGGTAGCACCAACTCCTGGTGCCAATTTATTGATCAGCTTTCTATTGCTGACTAATAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS CAA 90 bp TGTTATGATCATCTATTAGTCAGCAATAGAAAGCTGATCAATAAATaGGCACCAGGAGTTGGTGCTACCGTAACAAAGACCTGTGAAATA +
Preference number: 6 (lower is better)
Translates to: CYDHLLVSNRKLINK*APGVGATVTKTCEI
Trigger: TATTTCACAGGTCTTTGTTACGGTAGCACCAACTCCTGGTGCCAATTTATTGATCAGCTTTCTATTGCTGACTAATAGATGATCATAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS TCA 72 bp GAACTTATGGACTTGAGCAAAGAAAACTCCAAATGTTaGAAGCATGAACTGGTTGCTGTTAGATGCATATTC +
Preference number: 6 (lower is better)
Translates to: ELMDLSKENSKC*KHELVAVRCIF
Trigger: GAATATGCATCTAACAGCAACCAGTTCATGCTTTCAACATTTGGAGTTTTCTTTGCTCAAGTCCATAAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS CAA 72 bp GCAAAGAAAACTCCAAATGTTGAAAGCATGAACTGGTaGCTGTTAGATGCATATTCTAAGCTTGCTGTAAGA +
Preference number: 6 (lower is better)
Translates to: AKKTPNVESMNW*LLDAYSKLAVR
Trigger: TCTTACAGCAAGCTTAGAATATGCATCTAACAGCAACCAGTTCATGCTTTCAACATTTGGAGTTTTCTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473357.1
ENST00000628101.1
CDS TCA 72 bp TGGTTTGAAGGTTTGTGTCTCTTCCAAAATTCAGGTTaGAATTTAATTTCCAATGCAACGGTATTTAGAGGT +
Preference number: 6 (lower is better)
Translates to: WFEGLCLFQNSG*NLISNATVFRG
Trigger: ACCTCTAAATACCGTTGCATTGGAAATTAAATTTCAACCTGAATTTTGGAAGAGACACAAACCTTCAAACCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403208.7
ENST00000627998.2