RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC2A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000117394

Ensembl transcript IDs: ENST00000372500.4, ENST00000415851.6, ENST00000426263.10, ENST00000460369.3, ENST00000475162.3, ENST00000625233.2, ENST00000629908.1, ENST00000630287.2, ENST00000630821.1, ENST00000669445.1, ENST00000674545.1, ENST00000674765.1, ENST00000675112.1, ENST00000676097.1, ENST00000676254.1

Found 512 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCATGAGTATGGCACAACCCGCCATGCCAGCGAGGCCTATGAGGTaGAGGGTCCGCCGGCCTGCTCGCTCCACCACAAACAGCGACACG +
Preference number: 1 (lower is better)
Translates to: VMSMAQPAMPARPMR*RVRRPARSTTNSDT
Trigger: CGTGTCGCTGTTTGTGGTGGAGCGAGCAGGCCGGCGGACCCTGCACCTCATAGGCCTCGCTGGCATGGCGGGTTGTGCCATACTCATGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
3UTR TCA 90 bp GGATGGGCTGGCGGTAGGCGGGGGAGCGGAACAGCTCCAGGATGGTaGCCTTCTTCTCCCGCATCATCTGCCGACTCTCTTCCTTCATCT +
Preference number: 1 (lower is better)
Translates to: GWAGGRRGSGTAPGW*PSSPASSADSLPSS
Trigger: AGATGAAGGAAGAGAGTCGGCAGATGATGCGGGAGAAGAAGGTCACCATCCTGGAGCTGTTCCGCTCCCCCGCCTACCGCCAGCCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630287.2
3UTR CCA 90 bp TGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTGCTAGGCCCTaGACTGTCCAGGGCTGGAGTGAGGGTAGTTCATGCAAGGAAGTG +
Preference number: 1 (lower is better)
Translates to: WMPGPGRPHTLPARP*TVQGWSEGSSCKEV
Trigger: CACTTCCTTGCATGAACTACCCTCACTCCAGCCCTGGACAGTCCAGGGCCTAGCAGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460369.3
3UTR TCA 90 bp GACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTaGCATCTGTCAGGTTTGGAAGTCTCATCCAGCTGCCTGTGCTCC +
Preference number: 1 (lower is better)
Translates to: DIIAGWRKEPQARLG*HLSGLEVSSSCLCS
Trigger: GGAGCACAGGCAGCTGGATGAGACTTCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
3UTR CCA 90 bp GGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTaGAAGTCTCATCCAGCTGCCTGTGCTCCTGAGAGATCCTTAGGG +
Preference number: 1 (lower is better)
Translates to: GERSPRPGSADICQV*KSHPAACAPERSLG
Trigger: CCCTAAGGATCTCTCAGGAGCACAGGCAGCTGGATGAGACTTCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
3UTR CCA 90 bp GTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTaGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACTGG +
Preference number: 1 (lower is better)
Translates to: VSLQAPTGPLLMVIV*PSVQRRLEPGSPDW
Trigger: CCAGTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR CCA 90 bp ATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTaGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTC +
Preference number: 1 (lower is better)
Translates to: ILEPLSPEYSSGHHC*LEKGAPGPARLTSV
Trigger: GACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
3UTR GCA 90 bp AAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTaGTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCT +
Preference number: 1 (lower is better)
Translates to: KILEPLSPEYSSGHH*WLEKGAPGPARLTS
Trigger: AGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
3UTR GCA 90 bp GTAAGGGACTGGATCCTGAGTCGAAGTCTAAGCCGTTGCAGTGGTTaGAACCCCACTTACTTCTGTCTCACTCCCATCCAAACCTCCTAC +
Preference number: 1 (lower is better)
Translates to: VRDWILSRSLSRCSG*NPTYFCLTPIQTSY
Trigger: GTAGGAGGTTTGGATGGGAGTGAGACAGAAGTAAGTGGGGTTGCAACCACTGCAACGGCTTAGACTTCGACTCAGGATCCAGTCCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR GCA 90 bp GAGGTACGTGTAAGGGACTGGATCCTGAGTCGAAGTCTAAGCCGTTaGAGTGGTTGCAACCCCACTTACTTCTGTCTCACTCCCATCCAA +
Preference number: 1 (lower is better)
Translates to: EVRVRDWILSRSLSR*SGCNPTYFCLTPIQ
Trigger: TTGGATGGGAGTGAGACAGAAGTAAGTGGGGTTGCAACCACTGCAACGGCTTAGACTTCGACTCAGGATCCAGTCCCTTACACGTACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR CCA 90 bp GTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCTCCTaGGATAGAAGCTTTGTAGTTCATAGTTCGATTAGTGTGTCCTTA +
Preference number: 1 (lower is better)
Translates to: VGRSRPAERVAIATS*DRSFVVHSSISVSL
Trigger: TAAGGACACACTAATCGAACTATGAACTACAAAGCTTCTATCCCAGGAGGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR CCA 90 bp ACGTGTAAGGGACTGGATCCTGAGTCGAAGTCTAAGCCGTTGCAGTaGTTGCAACCCCACTTACTTCTGTCTCACTCCCATCCAAACCTC +
Preference number: 1 (lower is better)
Translates to: TCKGLDPESKSKPLQ*LQPHLLLSHSHPNL
Trigger: GAGGTTTGGATGGGAGTGAGACAGAAGTAAGTGGGGTTGCAACCACTGCAACGGCTTAGACTTCGACTCAGGATCCAGTCCCTTACACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR TCA 90 bp TATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCTTaGGCAGTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGTA +
Preference number: 1 (lower is better)
Translates to: YLASIHNRAGVSMSS*AVSLQAPTGPLLMV
Trigger: TACCATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR CCA 90 bp TCTCCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTaGGCACAGGAGACTCAGGCTGATATAAAAATAACAAAATCAGTA +
Preference number: 1 (lower is better)
Translates to: SPPSGMEPFRVKPGM*AQETQADIKITKSV
Trigger: TACTGATTTTGTTATTTTTATATCAGCCTGAGTCTCCTGTGCCCACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR CCA 90 bp CCAAATCGGCATCTTCTCATGAAATTCAGACTAGTGGCAGAAAACTaGACTTGTGATGAAGGAGCAGATGAAGTGCTCTGGAAATTCAGG +
Preference number: 1 (lower is better)
Translates to: PNRHLLMKFRLVAEN*TCDEGADEVLWKFR
Trigger: CCTGAATTTCCAGAGCACTTCATCTGCTCCTTCATCACAAGTCCAGTTTTCTGCCACTAGTCTGAATTTCATGAGAAGATGCCGATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR-3UTR TCA 90 bp TGGAGCCTGACCCCTAGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATACAGGCCCGGCTCGGCTaGCATCTGTCAGGTTTGGAA +
Preference number: 2 (lower is better)
Translates to: WSLTPRVGRSRPAERVAIQARLG*HLSGLE
Trigger: TTCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTG...TATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCTAGGGGTCAGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
3UTR-3UTR CCA 90 bp CTGACCCCTAGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCGTGAAGCCTGGGATGTaGGCACAGGAGACTCAGGCT +
Preference number: 2 (lower is better)
Translates to: LTPRVGRSRPAERVAIATVKPGM*AQETQA
Trigger: AGCCTGAGTCTCCTGTGCCCACATCCCAGGCTTCAC...GGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCTAGGGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR-3UTR TCA 90 bp GGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCTGCCAGCGAGGCCTATaGGGTGCAGGGTCCGCCGGC +
Preference number: 2 (lower is better)
Translates to: GPLLMVIVWPSVQRRLEPCQRGL*GAGSAG
Trigger: GCCGGCGGACCCTGCACCTCATAGGCCTCGCTGGCA...GGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
3UTR-3UTR GCA 90 bp AGTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCGCGAGGCCTATGAGGTaGAGGGTCCGCCGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: SEFAGSHRPSSHGNSVALARPMR*RVRRPA
Trigger: AGCAGGCCGGCGGACCCTGCACCTCATAGGCCTCGC...GAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
3UTR-3UTR CCA 90 bp TGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTGCTAGGCTGGACTGTCCAGGGCTaGAGTGAGGGTAGTTCATGC +
Preference number: 2 (lower is better)
Translates to: WTQLGCQDLVGPTHCLLGWTVQG*SEGSSC
Trigger: GCATGAACTACCCTCACTCCAGCCCTGGACAGTCCA...GCCTAGCAGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460369.3
3UTR-3UTR CCA 90 bp CAAGTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTTCAGCCCCCAGGGGATaGAACAGCTCCTCGGGTGTC +
Preference number: 2 (lower is better)
Translates to: QVSRQGLVSTLRHGTIQGSAPRG*NSSSGV
Trigger: GACACCCGAGGAGCTGTTCCATCCCCTGGGGGCTGA...ACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630287.2
3UTR-3UTR CCA 90 bp GGTCCAGCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTGCCGGGCTGGTGATCTaGGGCGACTCACACTTGGGA +
Preference number: 2 (lower is better)
Translates to: GPALQISWVKKASVSTGLAGLVI*GDSHLG
Trigger: TCCCAAGTGTGAGTCGCCCCAGATCACCAGCCCGGC...AAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGCTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
3UTR-3UTR CCA 90 bp CAAGTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTAGCCTGCAACGGCAATaGCAGCTGGACGTGGACCCT +
Preference number: 2 (lower is better)
Translates to: QVSRQGLVSTLRHGTIQGSLQRQ*QLDVDP
Trigger: AGGGTCCACGTCCAGCTGCCATTGCCGTTGCAGGCT...ACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
3UTR-3UTR GCA 90 bp CAAGTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTCTCCCTGCACTCCAGTaGTCCCAACTGGTCTCAGGT +
Preference number: 2 (lower is better)
Translates to: QVSRQGLVSTLRHGTIQGLPALQ*SQLVSG
Trigger: ACCTGAGACCAGTTGGGAGCACTGGAGTGCAGGGAG...ACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR-3UTR TCA 90 bp CTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCTGGAACCATTCAGGGTaGAGCCTGGGATGTGGGCAC +
Preference number: 2 (lower is better)
Translates to: LLMVIVWPSVQRRLEPGSWNHSG*SLGCGH
Trigger: GTGCCCACATCCCAGGCTTCACCCTGAATGGTTCCA...GCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR-3UTR TCA 90 bp TCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCACAGCTCCAGGATGGTaGCCTTCTTCTCCCGCATCA +
Preference number: 2 (lower is better)
Translates to: SHGNSVALSAKETRTRQPTAPGW*PSSPAS
Trigger: TGATGCGGGAGAAGAAGGTCACCATCCTGGAGCTGT...GGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
3UTR-3UTR TCA 90 bp TCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCTGTCTTCTTGAGCAGTaGGTTTGCAGGCTCCCACAG +
Preference number: 2 (lower is better)
Translates to: SHGNSVALSAKETRTRQPCLLEQ*VCRLPQ
Trigger: CTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACA...GGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR-3UTR TCA 90 bp CAAGTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGCCCACAATGAAATTTaGGGTCCAGTTGGAGAAGCC +
Preference number: 2 (lower is better)
Translates to: QVSRQGLVSTLRHGTIQGAHNEI*GPVGEA
Trigger: GGCTTCTCCAACTGGACCTCAAATTTCATTGTGGGC...ACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
3UTR-3UTR GCA 90 bp ATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACTCTTCTGGACATCATTaGTGGCTGGAGAAAGGAGCC +
Preference number: 2 (lower is better)
Translates to: MVIVWPSVQRRLEPGSPDSSGHH*WLEKGA
Trigger: GGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGA...GTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
3UTR-3UTR CCA 90 bp TCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCGACATCTGTCAGGTTTaGAAGTCTCATCCAGCTGCC +
Preference number: 2 (lower is better)
Translates to: SHGNSVALSAKETRTRQPDICQV*KSHPAA
Trigger: GGCAGCTGGATGAGACTTCCAAACCTGACAGATGTC...GGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
3UTR CAA 90 bp AGAGGTACGTGTAAGGGACTGGATCCTGAGTCGAAGTCTAAGCCGTaGCAGTGGTTGCAACCCCACTTACTTCTGTCTCACTCCCATCCA +
Preference number: 2 (lower is better)
Translates to: RGTCKGLDPESKSKP*QWLQPHLLLSHSHP
Trigger: TGGATGGGAGTGAGACAGAAGTAAGTGGGGTTGCAACCACTGCAACGGCTTAGACTTCGACTCAGGATCCAGTCCCTTACACGTACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR-3UTR TCA 90 bp CTCCATGTCTTCTTGAGCAGTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGTCTCCATGTCTTCTTaGGCAGTGAGTTTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: LHVFLSSEFAGSHRPSSHVSMSS*AVSLQA
Trigger: AGCCTGCAAACTCACTGCTCAAGAAGACATGGAGAC...ATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR-3UTR GCA 90 bp CCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGTTCTCCCGCATCATCTaGCGACTCTCTTCCTTCATC +
Preference number: 2 (lower is better)
Translates to: PSSHGNSVALSAKETRTRFSRII*RLSSFI
Trigger: GATGAAGGAAGAGAGTCGGCAGATGATGCGGGAGAA...CCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
3UTR-3UTR CCA 90 bp GCAATTCCAAATGAAATGAACACAGGGCAGCTTGACAGCTCATTGGGCCCATACGACATCATTGCTGGCTaGAGAAAGGAGCCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: AIPNEMNTGQLDSSLGPYDIIAG*RKEPQA
Trigger: GGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTC...GTATGGGCCCAATGAGCTGTCAAGCTGCCCTGTGTTCATTTCATTTGGAATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR-3UTR CCA 90 bp AAGAGGACACTGATGAGAGGTACGTGTAAGGGACTGGATCCTGAGTCGAAGTCTATTCAGGGTGAAGCCTaGGATGTGGGCACAGGAGAC +
Preference number: 2 (lower is better)
Translates to: KRTLMRGTCKGLDPESKSIQGEA*DVGTGD
Trigger: GTCTCCTGTGCCCACATCCCAGGCTTCACCCTGAAT...AGACTTCGACTCAGGATCCAGTCCCTTACACGTACCTCTCATCAGTGTCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR-3UTR CCA 90 bp AGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGGCCATAGCCACCTCCTaGGATAGAAGCTTTGTAGTT +
Preference number: 2 (lower is better)
Translates to: SLQAPTGPLLMVIVWPSVAIATS*DRSFVV
Trigger: AACTACAAAGCTTCTATCCCAGGAGGTGGCTATGGC...CACTGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCCTGCAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR CAA 90 bp TGTAAGGGACTGGATCCTGAGTCGAAGTCTAAGCCGTTGCAGTGGTaGCAACCCCACTTACTTCTGTCTCACTCCCATCCAAACCTCCTA +
Preference number: 2 (lower is better)
Translates to: CKGLDPESKSKPLQW*QPHLLLSHSHPNLL
Trigger: TAGGAGGTTTGGATGGGAGTGAGACAGAAGTAAGTGGGGTTGCAACCACTGCAACGGCTTAGACTTCGACTCAGGATCCAGTCCCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR-3UTR CCA 90 bp CTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCGCCATAGCCACCTCCTaGGATAGAAGCTTTGTAGTT +
Preference number: 2 (lower is better)
Translates to: LLMVIVWPSVQRRLEPGSAIATS*DRSFVV
Trigger: AACTACAAAGCTTCTATCCCAGGAGGTGGCTATGGC...GCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR-3UTR CCA 90 bp CAAGTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTTCCAGTGCTCCCAACTaGTCTCAGGTAAAGAAAGAT +
Preference number: 2 (lower is better)
Translates to: QVSRQGLVSTLRHGTIQGSSAPN*SQVKKD
Trigger: ATCTTTCTTTACCTGAGACCAGTTGGGAGCACTGGA...ACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR CAA 90 bp ATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCTaGAGCAGTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGT +
Preference number: 2 (lower is better)
Translates to: ISCIYTQQGRSLHVF*SSEFAGSHRPSSHG
Trigger: ACCATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR-3UTR CCA 90 bp TCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCGTAACAGGAGTGAGGTaGTGTATTTACAAGTTGGCT +
Preference number: 2 (lower is better)
Translates to: SHGNSVALSAKETRTRQPVTGVR*CIYKLA
Trigger: AGCCAACTTGTAAATACACCACCTCACTCCTGTTAC...GGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
3UTR-3UTR TCA 90 bp GTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAAACCTGTTGCTTGTCTaGATAGATTTGAGCAACAGT +
Preference number: 2 (lower is better)
Translates to: VSLQAPTGPLLMVIVWPSNLLLV*IDLSNS
Trigger: ACTGTTGCTCAAATCTATTCAGACAAGCAACAGGTT...TGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
3UTR-3UTR TCA 90 bp TCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAACCTGTTGCTTGTCTaGATAGATTTGAGCAACAGT +
Preference number: 2 (lower is better)
Translates to: SHGNSVALSAKETRTRQPNLLLV*IDLSNS
Trigger: ACTGTTGCTCAAATCTATTCAGACAAGCAACAGGTT...GGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
3UTR-3UTR CCA 90 bp CTCCATGTCTTCTTGAGCAGTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGTAACAGGAGTGAGGTaGTGTATTTACAAGTTGGCT +
Preference number: 2 (lower is better)
Translates to: LHVFLSSEFAGSHRPSSHVTGVR*CIYKLA
Trigger: AGCCAACTTGTAAATACACCACCTCACTCCTGTTAC...ATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
3UTR-3UTR CCA 90 bp CTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCATTAATTTGAGTGGTTaGGTAGGAAGAGATGGGAAG +
Preference number: 2 (lower is better)
Translates to: LLMVIVWPSVQRRLEPGSINLSG*VGRDGK
Trigger: CTTCCCATCTCTTCCTACCCAACCACTCAAATTAAT...GCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR-3UTR CCA 90 bp CACTTACTTCTGTCTCACTCCCATCCAAACCTCCTACCCTCAATCCACAAGCATCTCATGGTAATAGTGTaGCCCTCAGTGCAAAGGAGA +
Preference number: 2 (lower is better)
Translates to: HLLLSHSHPNLLPSIHKHLMVIV*PSVQRR
Trigger: TCTCCTTTGCACTGAGGGCCACACTATTACCATGAG...ATGCTTGTGGATTGAGGGTAGGAGGTTTGGATGGGAGTGAGACAGAAGTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR-3UTR CCA 90 bp GTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATAGGTCCAGCCCTACAGATGACATCTGTCAGGTTTaGAAGTCTCATCCAGCTGCC +
Preference number: 2 (lower is better)
Translates to: VVHSSISVSLGHRSSPTDDICQV*KSHPAA
Trigger: GGCAGCTGGATGAGACTTCCAAACCTGACAGATGTC...ATCTGTAGGGCTGGACCTATGTCCTAAGGACACACTAATCGAACTATGAACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
3UTR-3UTR CCA 90 bp GGTGTTTTAGCTTATTCACTGTGCGACTTCAGGCACATAACCTCTTTGAGCCTGTCTAAGCCGTTGCAGTaGTTGCAACCCCACTTACTT +
Preference number: 2 (lower is better)
Translates to: GVLAYSLCDFRHITSLSLSKPLQ*LQPHLL
Trigger: AAGTAAGTGGGGTTGCAACCACTGCAACGGCTTAGA...CAGGCTCAAAGAGGTTATGTGCCTGAAGTCGCACAGTGAATAAGCTAAAACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR-3UTR CCA 90 bp TATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCTTGACATCATTGCTGGCTaGAGAAAGGAGCCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: YINILHLYTTGQESPCLLDIIAG*RKEPQA
Trigger: GGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTC...AAGAAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
3UTR-3UTR CCA 90 bp TATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCTTCGATACCGGAGCCAATaGTGGCATACACAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: YINILHLYTTGQESPCLLRYRSQ*WHTQAA
Trigger: AGCAGCCTGTGTATGCCACCATTGGCTCCGGTATCG...AAGAAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
3UTR-3UTR TCA 90 bp TCCTGGGATAGAAGCTTTGTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATGGAGCCGTTAAGTCCTaGATATTCTTCTGGACATCA +
Preference number: 2 (lower is better)
Translates to: SWDRSFVVHSSISVSLGHGAVKS*IFFWTS
Trigger: TGATGTCCAGAAGAATATTCAGGACTTAACGGCTCC...ATGTCCTAAGGACACACTAATCGAACTATGAACTACAAAGCTTCTATCCCAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
3UTR-3UTR CCA 90 bp AATATATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTCCACAAAGCCAAAGATaGCCACGATGCTCAGATAGG +
Preference number: 2 (lower is better)
Translates to: NIYKYLASIHNRAGVSMSPQSQR*PRCSDR
Trigger: CCTATCTGAGCATCGTGGCCATCTTTGGCTTTGTGG...AGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
3UTR-3UTR TCA 90 bp ATATATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTTACAGATTAGCTGGGTaGAGAAGGCAAGTGTCTCGA +
Preference number: 2 (lower is better)
Translates to: IYINILHLYTTGQESPCLYRLAG*RRQVSR
Trigger: TCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTA...AAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR-3UTR TCA 90 bp ATATATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTGGAGCCGTTAAGTCCTaGATATTCTTCTGGACATCA +
Preference number: 2 (lower is better)
Translates to: IYINILHLYTTGQESPCLGAVKS*IFFWTS
Trigger: TGATGTCCAGAAGAATATTCAGGACTTAACGGCTCC...AAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
3UTR GCA 72 bp ATGGCACAACCCGCCATGCCAGCGAGGCCTATGAGGTaGAGGGTCCGCCGGCCTGCTCGCTCCACCACAAAC +
Preference number: 3 (lower is better)
Translates to: MAQPAMPARPMR*RVRRPARSTTN
Trigger: GTTTGTGGTGGAGCGAGCAGGCCGGCGGACCCTGCACCTCATAGGCCTCGCTGGCATGGCGGGTTGTGCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
3UTR TCA 72 bp GAGATCCTTAGGGCTGCTGGGAGCAGGCCGGGCTGGTaGTCTGGGGCGACTCACACTTGGGAATCAGCCCCC +
Preference number: 3 (lower is better)
Translates to: EILRAAGSRPGW*SGATHTWESAP
Trigger: GGGGGCTGATTCCCAAGTGTGAGTCGCCCCAGATCACCAGCCCGGCCTGCTCCCAGCAGCCCTAAGGATCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630287.2
3UTR TCA 72 bp GCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTaGCATCTGTCAGGTTTGGAAGTCTCATCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: AGWRKEPQARLG*HLSGLEVSSSC
Trigger: GCAGCTGGATGAGACTTCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
3UTR TCA 72 bp GGCGGTAGGCGGGGGAGCGGAACAGCTCCAGGATGGTaGCCTTCTTCTCCCGCATCATCTGCCGACTCTCTT +
Preference number: 3 (lower is better)
Translates to: GGRRGSGTAPGW*PSSPASSADSL
Trigger: AAGAGAGTCGGCAGATGATGCGGGAGAAGAAGGTCACCATCCTGGAGCTGTTCCGCTCCCCCGCCTACCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630287.2
3UTR TCA 72 bp AGGGTAGCTGCTCCAGCAGTGCTAGCGCGATGGTCATaGGTATGGCACAACCCGCCATGCCAGCGAGGCCTA +
Preference number: 3 (lower is better)
Translates to: RVAAPAVLARWS*VWHNPPCQRGL
Trigger: TAGGCCTCGCTGGCATGGCGGGTTGTGCCATACTCATGACCATCGCGCTAGCACTGCTGGAGCAGCTACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
3UTR GCA 72 bp TCCCGCATCATCTGCCGACTCTCTTCCTTCATCTCCTaGAGGTCATGGGTCACGTCAGCTGTCCCGCGCAGC +
Preference number: 3 (lower is better)
Translates to: SRIICRLSSFIS*RSWVTSAVPRS
Trigger: GCTGCGCGGGACAGCTGACGTGACCCATGACCTGCAGGAGATGAAGGAAGAGAGTCGGCAGATGATGCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
3UTR-3UTR CAA 90 bp CTGACCCCTAGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCAGTCTCCATGTCTTCTaGAGCAGTGAGTTTGCAGGC +
Preference number: 3 (lower is better)
Translates to: LTPRVGRSRPAERVAIATSLHVF*SSEFAG
Trigger: GCCTGCAAACTCACTGCTCAAGAAGACATGGAGACT...GGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCTAGGGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR GCA 72 bp GAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTaGTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGG +
Preference number: 3 (lower is better)
Translates to: EPLSPEYSSGHH*WLEKGAPGPAR
Trigger: CCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
3UTR TCA 72 bp TCTATACACAACAGGGCAGGAGTCTCCATGTCTTCTTaGGCAGTGAGTTTGCAGGCTCCCACAGGCCCTCTT +
Preference number: 3 (lower is better)
Translates to: SIHNRAGVSMSS*AVSLQAPTGPL
Trigger: AAGAGGGCCTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACATGGAGACTCCTGCCCTGTTGTGTATAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR CCA 72 bp GGACTGGATCCTGAGTCGAAGTCTAAGCCGTTGCAGTaGTTGCAACCCCACTTACTTCTGTCTCACTCCCAT +
Preference number: 3 (lower is better)
Translates to: GLDPESKSKPLQ*LQPHLLLSHSH
Trigger: ATGGGAGTGAGACAGAAGTAAGTGGGGTTGCAACCACTGCAACGGCTTAGACTTCGACTCAGGATCCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR GCA 72 bp TGGATCCTGAGTCGAAGTCTAAGCCGTTGCAGTGGTTaGAACCCCACTTACTTCTGTCTCACTCCCATCCAA +
Preference number: 3 (lower is better)
Translates to: WILSRSLSRCSG*NPTYFCLTPIQ
Trigger: TTGGATGGGAGTGAGACAGAAGTAAGTGGGGTTGCAACCACTGCAACGGCTTAGACTTCGACTCAGGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR GCA 72 bp GTAAGGGACTGGATCCTGAGTCGAAGTCTAAGCCGTTaGAGTGGTTGCAACCCCACTTACTTCTGTCTCACT +
Preference number: 3 (lower is better)
Translates to: VRDWILSRSLSR*SGCNPTYFCLT
Trigger: AGTGAGACAGAAGTAAGTGGGGTTGCAACCACTGCAACGGCTTAGACTTCGACTCAGGATCCAGTCCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR CCA 72 bp TCCAGGCCAGCAGAACGGGTGGCCATAGCCACCTCCTaGGATAGAAGCTTTGTAGTTCATAGTTCGATTAGT +
Preference number: 3 (lower is better)
Translates to: SRPAERVAIATS*DRSFVVHSSIS
Trigger: ACTAATCGAACTATGAACTACAAAGCTTCTATCCCAGGAGGTGGCTATGGCCACCCGTTCTGCTGGCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR-3UTR CAA 90 bp CCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGGCAACAGTCTTGCTTTaGTTAAAATCCTGGAGCCGT +
Preference number: 3 (lower is better)
Translates to: PSSHGNSVALSAKETRTRATVLL*LKSWSR
Trigger: ACGGCTCCAGGATTTTAACAAAAGCAAGACTGTTGC...CCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
3UTR-3UTR CAA 90 bp CCAGCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTAGTGGATCAAACAGATTTTaGAGCAAGAGGACACTGATG +
Preference number: 3 (lower is better)
Translates to: PALQISWVKKASVSTGLSGSNRF*SKRTLM
Trigger: CATCAGTGTCCTCTTGCTCAAAAATCTGTTTGATCC...ACTAAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR CCA 72 bp TCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTaGGCACAGGAGACTCAGGCTGATATAAAAATAACA +
Preference number: 3 (lower is better)
Translates to: SGMEPFRVKPGM*AQETQADIKIT
Trigger: TGTTATTTTTATATCAGCCTGAGTCTCCTGTGCCCACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR-3UTR CAA 90 bp AGTAACAGGAGTGAGGTGGTGTATTTACAAGTTGGCTTGTCCAGATATACTATACAGCTTGACAGCTCATaGGGCCCATACAAAGAACGT +
Preference number: 3 (lower is better)
Translates to: SNRSEVVYLQVGLSRYTIQLDSS*GPYKER
Trigger: ACGTTCTTTGTATGGGCCCAATGAGCTGTCAAGCTG...TATAGTATATCTGGACAAGCCAACTTGTAAATACACCACCTCACTCCTGTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR GCA 90 bp TGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTGCTAGGCGCTGGTGGCTCTGGCTaGGCCGGGTACGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: WTQLGCQDLVGPTHCLLGAGGSG*AGYAGG
Trigger: GCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGC...GCCTAGCAGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR TCA 90 bp TGGAGCCTGACCCCTAGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATATGCCAGCGAGGCCTATaGGGTGCAGGGTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: WSLTPRVGRSRPAERVAICQRGL*GAGSAG
Trigger: GCCGGCGGACCCTGCACCTCATAGGCCTCGCTGGCA...TATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCTAGGGGTCAGGCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp TGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTGCTAGGCTCCCGCTCAGGCTCGTaGTCCGGTCCGGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: WTQLGCQDLVGPTHCLLGSRSGS*SGPGTP
Trigger: GGGAGTCCCCGGACCGGAGCACGAGCCTGAGCGGGA...GCCTAGCAGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR GCA 90 bp GTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACTGGCCCTTCCCGCTCCATGGCAGCGCTaGGCTGGTGGCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VALSAKETRTRQPRLALPAPWQR*AGGSGC
Trigger: GCAGCCAGAGCCACCAGCGCAGCGCTGCCATGGAGC...GGGAAGGGCCAGTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp CCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGGGCACAGGAGCTGCGCTGGTGGCTCTaGCTGCGCCGGGTACGCGGG +
Preference number: 4 (lower is better)
Translates to: PPSGMEPFRVKPGMWAQELRWWL*LRRVRG
Trigger: CCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAG...CTCCTGTGCCCACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp CTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACTGGCCCTTCCCCTCTCCGCAGCGCTGCGCTGGTaGCTCTGGCTGCGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: LSAKETRTRQPRLALPLSAALRW*LWLRRV
Trigger: TACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGC...GGAGAGGGGAAGGGCCAGTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp CTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACTGGCCCTTCCCCTCTCCATGGCAGCGCTGCGCTaGTGGCTCTGGCTGCGCCGG +
Preference number: 4 (lower is better)
Translates to: LSAKETRTRQPRLALPLSMAALR*WLWLRR
Trigger: CCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCAT...GGAGAGGGGAAGGGCCAGTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp AGCTGCTCCAGCAGTGCTAGCGCGATGGTCATGAGTATGGCACAACCCGCCATGGCTGGTGGCTCTGGCTaGGCCGGGTACGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SCSSSASAMVMSMAQPAMAGGSG*AGYAGG
Trigger: GCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGC...CATGGCGGGTTGTGCCATACTCATGACCATCGCGCTAGCACTGCTGGAGCAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
CDS-3UTR GCA 90 bp TTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTCCAGCTGGTGCAGGGTaGCCAGGGCCCCACGAAGGG +
Preference number: 4 (lower is better)
Translates to: FFWTSLLAGERSPRPGSAPAGAG*PGPHEG
Trigger: CCCTTCGTGGGGCCCTGGGCACCCTGCACCAGCTGG...AGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR TCA 90 bp TGGAGCCTGACCCCTAGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATACTCCCACGGCCAGCATaGGGCGACCCGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: WSLTPRVGRSRPAERVAILPRPA*GDPSAS
Trigger: AGAAGCTGACGGGTCGCCTCATGCTGGCCGTGGGAG...TATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCTAGGGGTCAGGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp TTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTGCTAGGTCCTGCTCCCTGGCGTaGTCACTCGGGGACCCGCGA +
Preference number: 4 (lower is better)
Translates to: LDTAWMPGPGRPHTLPARSCSLA*SLGDPR
Trigger: TCGCGGGTCCCCGAGTGAGCACGCCAGGGAGCAGGA...CCTAGCAGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR GCA 90 bp CTGACCCCTAGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCCCGTCAGCTTCTTGCTaGTGGGCTCCATGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LTPRVGRSRPAERVAIATPSASC*WAPWQR
Trigger: GCGCTGCCATGGAGCCCAGCAGCAAGAAGCTGACGG...GGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCTAGGGGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp CATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCGGATGCCGACGACGATaGCCAGCTGGTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: HHCWLEKGAPGPARLTSVGCRRR*PAGAGC
Trigger: GCACCCTGCACCAGCTGGGCATCGTCGTCGGCATCC...GACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR GCA 90 bp TGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCGGATGCCGACGACGATaGCCAGCTGGTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: WTSLLAGERSPRPGSADIGCRRR*PAGAGC
Trigger: GCACCCTGCACCAGCTGGGCATCGTCGTCGGCATCC...GATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR GCA 90 bp CTGACCCCTAGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCGTGGCATACACAGGCTaGTGCACCCCCGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: LTPRVGRSRPAERVAIATVAYTG*CTPAFS
Trigger: CGAGAAGGCGGGGGTGCAGCAGCCTGTGTATGCCAC...GGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCTAGGGGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp TTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGCGAGGCCTATGAGGTaGAGGGTCCGCCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: FFWTSLLAGERSPRPGSAARPMR*RVRRPA
Trigger: AGCAGGCCGGCGGACCCTGCACCTCATAGGCCTCGC...AGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp TCCAGGCCAGCAGAACGGGTGGCCATAGCCACCTCCTGGGATAGAAGCTTTGTACTGCGCTGGTGGCTCTaGCTGCGCCGGGTACGCGGG +
Preference number: 4 (lower is better)
Translates to: SRPAERVAIATSWDRSFVLRWWL*LRRVRG
Trigger: CCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAG...TACAAAGCTTCTATCCCAGGAGGTGGCTATGGCCACCCGTTCTGCTGGCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp TTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTGCTAGGTGCTGCTGGGCTCCATaGCAGCGCTGCGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LDTAWMPGPGRPHTLPARCCWAP*QRCAGG
Trigger: GCCACCAGCGCAGCGCTGCCATGGAGCCCAGCAGCA...CCTAGCAGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR CCA 90 bp CCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGGGCACAGGAGTGCTGCTGGGCTCCATaGCAGCGCTGCGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PPSGMEPFRVKPGMWAQECCWAP*QRCAGG
Trigger: GCCACCAGCGCAGCGCTGCCATGGAGCCCAGCAGCA...CTCCTGTGCCCACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp GCTGCCTGTGCTCCTGAGAGATCCTTAGGGCTGCTGGGAGCAGGCCGGGCTGGTTCAGCTTCTTGCTGCTaGGCTCCATGGCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: AACAPERSLGLLGAGRAGSASCC*APWQRC
Trigger: GCAGCGCTGCCATGGAGCCCAGCAGCAAGAAGCTGA...ACCAGCCCGGCCTGCTCCCAGCAGCCCTAAGGATCTCTCAGGAGCACAGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp TTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTCTCCCACTGCGACTCTaGCTCCGACCCCCGTCGTTT +
Preference number: 4 (lower is better)
Translates to: LLAGERSPRPGSADICQVLPLRL*LRPPSF
Trigger: AAACGACGGGGGTCGGAGTCAGAGTCGCAGTGGGAG...AACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp AGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCTCCTGGGATCTCCCACTGCGACTCTaGCTCCGACCCCCGTCGTTT +
Preference number: 4 (lower is better)
Translates to: RVGRSRPAERVAIATSWDLPLRL*LRPPSF
Trigger: AAACGACGGGGGTCGGAGTCAGAGTCGCAGTGGGAG...ATCCCAGGAGGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp CTGACCCCTAGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCGTTTCGAGAAGCCCATaGGCACGGCGGACACGAAGG +
Preference number: 4 (lower is better)
Translates to: LTPRVGRSRPAERVAIATVSRSP*ARRTRR
Trigger: CCTTCGTGTCCGCCGTGCTCATGGGCTTCTCGAAAC...GGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCTAGGGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp CCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGGGCACAGGAGCTCCCACGGCCAGCATaGGGCGACCCGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PPSGMEPFRVKPGMWAQELPRPA*GDPSAS
Trigger: AGAAGCTGACGGGTCGCCTCATGCTGGCCGTGGGAG...CTCCTGTGCCCACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp CCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGGGCACAGGAGGCAGCACCACAGCGATaGGGATGGGCTGGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: PPSGMEPFRVKPGMWAQEAAPQR*GWAGGR
Trigger: CCTACCGCCAGCCCATCCTCATCGCTGTGGTGCTGC...CTCCTGTGCCCACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp GGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGCCAGCTGGTGCAGGGTaGCCAGGGCCCCACGAAGGG +
Preference number: 4 (lower is better)
Translates to: GLVSTLRHGTIQGEAWDVPAGAG*PGPHEG
Trigger: CCCTTCGTGGGGCCCTGGGCACCCTGCACCAGCTGG...CACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp CCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGGGCACAGGAGCAGGGTCCGCCGGCCTaGTCGCTCCACCACAAACAG +
Preference number: 4 (lower is better)
Translates to: PPSGMEPFRVKPGMWAQEQGPPA*SLHHKQ
Trigger: CTGTTTGTGGTGGAGCGAGCAGGCCGGCGGACCCTG...CTCCTGTGCCCACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp GGTCCAGCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTCTGCGCTGGTGGCTCTaGCTGCGCCGGGTACGCGGG +
Preference number: 4 (lower is better)
Translates to: GPALQISWVKKASVSTGLLRWWL*LRRVRG
Trigger: CCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAG...AAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGCTGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp ACTTTATTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTCTGCGCTGGTGGCTCTaGCTGCGCCGGGTACGCGGG +
Preference number: 4 (lower is better)
Translates to: TLLDTAWMPGPGRPHTLPLRWWL*LRRVRG
Trigger: CCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAG...AGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAATAAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR CCA 90 bp TATTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTGCTAGCAGCGCTGCGCTGGTaGCTCTGGCTGCGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: YWTQLGCQDLVGPTHCLLAALRW*LWLRRV
Trigger: TACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGC...TAGCAGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR CCA 90 bp TCCAGGCCAGCAGAACGGGTGGCCATAGCCACCTCCTGGGATAGAAGCTTTGTAATGGCAGCGCTGCGCTaGTGGCTCTGGCTGCGCCGG +
Preference number: 4 (lower is better)
Translates to: SRPAERVAIATSWDRSFVMAALR*WLWLRR
Trigger: CCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCAT...TACAAAGCTTCTATCCCAGGAGGTGGCTATGGCCACCCGTTCTGCTGGCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp TGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTGCTAGGCCTGCCTGCTAGGCCCTaGACTGTCCAGGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: WTQLGCQDLVGPTHCLLGLPARP*TVQGWS
Trigger: ACTCCAGCCCTGGACAGTCCAGGGCCTAGCAGGCAG...GCCTAGCAGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR TCA 90 bp CTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTGGAAGTCTCCCACTGCGACTCTaGCTCCGACCCCCGTCGTTT +
Preference number: 4 (lower is better)
Translates to: LEKGAPGPARLTSVRFGSLPLRL*LRPPSF
Trigger: AAACGACGGGGGTCGGAGTCAGAGTCGCAGTGGGAG...ACTTCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp AGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGTGCCAGCGAGGCCTATaGGGTGCAGGGTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: SLQAPTGPLLMVIVWPSVCQRGL*GAGSAG
Trigger: GCCGGCGGACCCTGCACCTCATAGGCCTCGCTGGCA...CACTGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCCTGCAAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp TGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTGGACAGGCCCGGCTCGGCTaGCATCTGTCAGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: WLEKGAPGPARLTSVRFGQARLG*HLSGLE
Trigger: TTCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTG...TCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR TCA 90 bp TTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACCAGGCCCGGCTCGGCTaGCATCTGTCAGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: FWTSLLAGERSPRPGSADQARLG*HLSGLE
Trigger: TTCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTG...GTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR GCA 90 bp GTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGAATCCCGCTCAGGCTCGTaGTCCGGTCCGGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: VSRQGLVSTLRHGTIQGESRSGS*SGPGTP
Trigger: GGGAGTCCCCGGACCGGAGCACGAGCCTGAGCGGGA...TTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp TATTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTGCTAGCTCCATGGCAGCGCTaGGCTGGTGGCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: YWTQLGCQDLVGPTHCLLAPWQR*AGGSGC
Trigger: GCAGCCAGAGCCACCAGCGCAGCGCTGCCATGGAGC...TAGCAGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR GCA 90 bp ACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGGAGCCAAGCACTaGTCCTCCCACGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: TSLLAGERSPRPGSADICQGAKH*SSHGQH
Trigger: ATGCTGGCCGTGGGAGGAGCAGTGCTTGGCTCCCTG...ACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR GCA 90 bp TGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTGCTAGGCTGGACACAGCTTGGATaGCAGGACCTGGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: WTQLGCQDLVGPTHCLLGWTQLG*QDLVGP
Trigger: GGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCA...GCCTAGCAGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR CCA 90 bp GTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGAAATGGCAGCGCTGCGCTaGTGGCTCTGGCTGCGCCGG +
Preference number: 4 (lower is better)
Translates to: VSRQGLVSTLRHGTIQGEMAALR*WLWLRR
Trigger: CCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCAT...TTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp ACTTTATTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTATGGCAGCGCTGCGCTaGTGGCTCTGGCTGCGCCGG +
Preference number: 4 (lower is better)
Translates to: TLLDTAWMPGPGRPHTLPMAALR*WLWLRR
Trigger: CCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCAT...AGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAATAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR CCA 90 bp CTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACTGGCCCTTCCCCTCTCCTGGGCACGAAGCCTGTaGTCAGGCCGCAGTACACAC +
Preference number: 4 (lower is better)
Translates to: LSAKETRTRQPRLALPLSWARSL*SGRSTH
Trigger: GTGTGTACTGCGGCCTGACCACAGGCTTCGTGCCCA...GGAGAGGGGAAGGGCCAGTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp TGGAGCCTGACCCCTAGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATATCAGCTTCTTGCTGCTaGGCTCCATGGCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: WSLTPRVGRSRPAERVAISASCC*APWQRC
Trigger: GCAGCGCTGCCATGGAGCCCAGCAGCAAGAAGCTGA...TATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCTAGGGGTCAGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp GTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACTGGCCCTTCCCCCCCACGAAGGGCTGTaGGTGACACTTCACCCACAT +
Preference number: 4 (lower is better)
Translates to: VALSAKETRTRQPRLALPPHEGL*VTLHPH
Trigger: ATGTGGGTGAAGTGTCACCCACAGCCCTTCGTGGGG...GGGAAGGGCCAGTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCAC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp CTGACCCCTAGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCATCTCCTGCAGGTCATaGGTCACGTCAGCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: LTPRVGRSRPAERVAIATISCRS*VTSAVP
Trigger: CGGGACAGCTGACGTGACCCATGACCTGCAGGAGAT...GGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCTAGGGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp CATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGCCTGCAACGGCAATaGCAGCTGGACGTGGACCCT +
Preference number: 4 (lower is better)
Translates to: HHCWLEKGAPGPARLTSVSLQRQ*QLDVDP
Trigger: AGGGTCCACGTCCAGCTGCCATTGCCGTTGCAGGCT...GACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp CTGACCCCTAGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCGACATCATTGCTGGCTaGAGAAAGGAGCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LTPRVGRSRPAERVAIATDIIAG*RKEPQA
Trigger: GGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTC...GGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCTAGGGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp TTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGTTTCGAGAAGCCCATaGGCACGGCGGACACGAAGG +
Preference number: 4 (lower is better)
Translates to: FFWTSLLAGERSPRPGSAVSRSP*ARRTRR
Trigger: CCTTCGTGTCCGCCGTGCTCATGGGCTTCTCGAAAC...AGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR TCA 90 bp GCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTAGTCTCTGCCAGCGAGGCCTATaGGGTGCAGGGTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: ALQISWVKKASVSTGLSLCQRGL*GAGSAG
Trigger: GCCGGCGGACCCTGCACCTCATAGGCCTCGCTGGCA...GAGACTAAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp CTGACCCCTAGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCGAACACAGGGCAGCTTaGCAGCTCATTGGGCCCATA +
Preference number: 4 (lower is better)
Translates to: LTPRVGRSRPAERVAIATEHRAA*QLIGPI
Trigger: TATGGGCCCAATGAGCTGTCAAGCTGCCCTGTGTTC...GGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCTAGGGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR GCA 90 bp TCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCTCCTGCTCCCTGGCGTaGTCACTCGGGGACCCGCGA +
Preference number: 4 (lower is better)
Translates to: SHGNSVALSAKETRTRQPSCSLA*SLGDPR
Trigger: TCGCGGGTCCCCGAGTGAGCACGCCAGGGAGCAGGA...GGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp GCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTAGTCTCTCCCGCTCAGGCTCGTaGTCCGGTCCGGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: ALQISWVKKASVSTGLSLSRSGS*SGPGTP
Trigger: GGGAGTCCCCGGACCGGAGCACGAGCCTGAGCGGGA...GAGACTAAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp AGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGGCTCCATGGCAGCGCTaGGCTGGTGGCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLQAPTGPLLMVIVWPSVAPWQR*AGGSGC
Trigger: GCAGCCAGAGCCACCAGCGCAGCGCTGCCATGGAGC...CACTGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCCTGCAAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp CAGGTTTGGAAGTCTCATCCAGCTGCCTGTGCTCCTGAGAGATCCTTAGGGCTGGCTCCATGGCAGCGCTaGGCTGGTGGCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QVWKSHPAACAPERSLGLAPWQR*AGGSGC
Trigger: GCAGCCAGAGCCACCAGCGCAGCGCTGCCATGGAGC...CAGCCCTAAGGATCTCTCAGGAGCACAGGCAGCTGGATGAGACTTCCAAACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR GCA 90 bp GGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGGGATGCCGACGACGATaGCCAGCTGGTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GSHRPSSHGNSVALSAKEGCRRR*PAGAGC
Trigger: GCACCCTGCACCAGCTGGGCATCGTCGTCGGCATCC...CTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp CGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGTGGCATACACAGGCTaGTGCACCCCCGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: RQGLVSTLRHGTIQGEAWVAYTG*CTPAFS
Trigger: CGAGAAGGCGGGGGTGCAGCAGCCTGTGTATGCCAC...CCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp ATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACGCGAGGCCTATGAGGTaGAGGGTCCGCCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: MVIVWPSVQRRLEPGSPDARPMR*RVRRPA
Trigger: AGCAGGCCGGCGGACCCTGCACCTCATAGGCCTCGC...GTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp GGTCCAGCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTGCGAGGCCTATGAGGTaGAGGGTCCGCCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GPALQISWVKKASVSTGLARPMR*RVRRPA
Trigger: AGCAGGCCGGCGGACCCTGCACCTCATAGGCCTCGC...AAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGCTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp TGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCCCAGTTGGAGAAGCCTaGAACGGCAATGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: WTSLLAGERSPRPGSADIPVGEA*NGNGSW
Trigger: CCAGCTGCCATTGCCGTTGCAGGCTTCTCCAACTGG...GATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR GCA 90 bp TTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACCCAGTTGGAGAAGCCTaGAACGGCAATGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FWTSLLAGERSPRPGSADPVGEA*NGNGSW
Trigger: CCAGCTGCCATTGCCGTTGCAGGCTTCTCCAACTGG...GTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp GGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGTGGTCTCCTGCTCCCTaGCGTGCTCACTCGGGGACC +
Preference number: 4 (lower is better)
Translates to: GSHRPSSHGNSVALSAKEWSPAP*RAHSGT
Trigger: GGTCCCCGAGTGAGCACGCCAGGGAGCAGGAGACCA...CTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp GGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGCAGCGCTGCGCTGGTaGCTCTGGCTGCGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: GPLLMVIVWPSVQRRLEPAALRW*LWLRRV
Trigger: TACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGC...GGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp TGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTGGACCCCACGAAGGGCTGTaGGTGACACTTCACCCACAT +
Preference number: 4 (lower is better)
Translates to: WLEKGAPGPARLTSVRFGPHEGL*VTLHPH
Trigger: ATGTGGGTGAAGTGTCACCCACAGCCCTTCGTGGGG...TCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR CCA 90 bp AGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCTCCTGGGATATCTCCTGCAGGTCATaGGTCACGTCAGCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: RVGRSRPAERVAIATSWDISCRS*VTSAVP
Trigger: CGGGACAGCTGACGTGACCCATGACCTGCAGGAGAT...ATCCCAGGAGGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp GTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACTGGCCCTTCCCTACCGGAGCCAATGGTaGCATACACAGGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VALSAKETRTRQPRLALPYRSQW*HTQAAA
Trigger: TGCAGCAGCCTGTGTATGCCACCATTGGCTCCGGTA...GGGAAGGGCCAGTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp TTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTAGCCTGCAACGGCAATaGCAGCTGGACGTGGACCCT +
Preference number: 4 (lower is better)
Translates to: FFWTSLLAGERSPRPGSASLQRQ*QLDVDP
Trigger: AGGGTCCACGTCCAGCTGCCATTGCCGTTGCAGGCT...AGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp ACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGGGCACAGGAGACTCAGCCCCCAGGGGATaGAACAGCTCCTCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: TLRHGTIQGEAWDVGTGDSAPRG*NSSSGV
Trigger: GACACCCGAGGAGCTGTTCCATCCCCTGGGGGCTGA...GTCTCCTGTGCCCACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp CATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCGACATCATTGCTGGCTaGAGAAAGGAGCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HHCWLEKGAPGPARLTSVDIIAG*RKEPQA
Trigger: GGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTC...GACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR TCA 90 bp TCCAGGCCAGCAGAACGGGTGGCCATAGCCACCTCCTGGGATAGAAGCTTTGTACGAACACCTGGGCGATaGGGATGCCGACGACGATGC +
Preference number: 4 (lower is better)
Translates to: SRPAERVAIATSWDRSFVRTPGR*GCRRRC
Trigger: GCATCGTCGTCGGCATCCTCATCGCCCAGGTGTTCG...TACAAAGCTTCTATCCCAGGAGGTGGCTATGGCCACCCGTTCTGCTGGCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000674765.1
CDS-3UTR TCA 90 bp AGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCTCCTGGGATACAGCTCCAGGATGGTaGCCTTCTTCTCCCGCATCA +
Preference number: 4 (lower is better)
Translates to: RVGRSRPAERVAIATSWDTAPGW*PSSPAS
Trigger: TGATGCGGGAGAAGAAGGTCACCATCCTGGAGCTGT...ATCCCAGGAGGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp GTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGAAGCAGCACCACAGCGATaGGGATGGGCTGGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: VSRQGLVSTLRHGTIQGEAAPQR*GWAGGR
Trigger: CCTACCGCCAGCCCATCCTCATCGCTGTGGTGCTGC...TTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp CAAGTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTAGCAGGCCGGGCTGGTaGTCTGGGGCGACTCACACT +
Preference number: 4 (lower is better)
Translates to: QVSRQGLVSTLRHGTIQGSRPGW*SGATHT
Trigger: AGTGTGAGTCGCCCCAGATCACCAGCCCGGCCTGCT...ACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR GCA 90 bp CCAGCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTAGTTCCTGCTCCCTGGCGTaGTCACTCGGGGACCCGCGA +
Preference number: 4 (lower is better)
Translates to: PALQISWVKKASVSTGLSSCSLA*SLGDPR
Trigger: TCGCGGGTCCCCGAGTGAGCACGCCAGGGAGCAGGA...ACTAAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp GGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGGCGTGGTGGGCAGGATaGTCTCCCCATAGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: GLVSTLRHGTIQGEAWDVAWWAG*SPHSGG
Trigger: TCCACCGCTATGGGGAGAGCATCCTGCCCACCACGC...CACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp AGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCAGCTGGTGCAGGGTaGCCAGGGCCCCACGAAGGG +
Preference number: 4 (lower is better)
Translates to: SPEYSSGHHCWLEKGAPGPAGAG*PGPHEG
Trigger: CCCTTCGTGGGGCCCTGGGCACCCTGCACCAGCTGG...GCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR GCA 90 bp GGTCCAGCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTGGATGCCGACGACGATaGCCAGCTGGTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GPALQISWVKKASVSTGLGCRRR*PAGAGC
Trigger: GCACCCTGCACCAGCTGGGCATCGTCGTCGGCATCC...AAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGCTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp AGCTGCTCCAGCAGTGCTAGCGCGATGGTCATGAGTATGGCACAACCCGCCATGAGCTGCTGGGACAGCTaGAGCACCACAGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: SCSSSASAMVMSMAQPAMSCWDS*STTAMR
Trigger: CCTCATCGCTGTGGTGCTGCAGCTGTCCCAGCAGCT...CATGGCGGGTTGTGCCATACTCATGACCATCGCGCTAGCACTGCTGGAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
CDS-3UTR GCA 90 bp TATTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTGCTAGTAGGCCCCACACACTaGCTGCTAGGCCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: YWTQLGCQDLVGPTHCLLVGPTH*LLGPGL
Trigger: CAGTCCAGGGCCTAGCAGGCAGTGTGTGGGGCCTAC...TAGCAGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR CCA 90 bp ATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACTGGTCTCCTGCTCCCTaGCGTGCTCACTCGGGGACC +
Preference number: 4 (lower is better)
Translates to: MVIVWPSVQRRLEPGSPDWSPAP*RAHSGT
Trigger: GGTCCCCGAGTGAGCACGCCAGGGAGCAGGAGACCA...GTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp ACTTTATTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTTGGTCTCCTGCTCCCTaGCGTGCTCACTCGGGGACC +
Preference number: 4 (lower is better)
Translates to: TLLDTAWMPGPGRPHTLPWSPAP*RAHSGT
Trigger: GGTCCCCGAGTGAGCACGCCAGGGAGCAGGAGACCA...AGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAATAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR CCA 90 bp ACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGGGCACAGGAGACTGGGCACGAAGCCTGTaGTCAGGCCGCAGTACACAC +
Preference number: 4 (lower is better)
Translates to: TLRHGTIQGEAWDVGTGDWARSL*SGRSTH
Trigger: GTGTGTACTGCGGCCTGACCACAGGCTTCGTGCCCA...GTCTCCTGTGCCCACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp GGTACGTGTAAGGGACTGGATCCTGAGTCGAAGTCTAAGCCGTTGCAGTGGTTGACGACGATGCCCAGCTaGTGCAGGGTGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GTCKGLDPESKSKPLQWLTTMPS*CRVPRA
Trigger: GGCCCTGGGCACCCTGCACCAGCTGGGCATCGTCGT...CAACCACTGCAACGGCTTAGACTTCGACTCAGGATCCAGTCCCTTACACGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR CCA 90 bp CATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCTACCGGAGCCAATGGTaGCATACACAGGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: HHCWLEKGAPGPARLTSVYRSQW*HTQAAA
Trigger: TGCAGCAGCCTGTGTATGCCACCATTGGCTCCGGTA...GACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp CTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACTGGCCCTTCCCCTCTCCTACCGGAGCCAATGGTaGCATACACAGGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LSAKETRTRQPRLALPLSYRSQW*HTQAAA
Trigger: TGCAGCAGCCTGTGTATGCCACCATTGGCTCCGGTA...GGAGAGGGGAAGGGCCAGTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp TGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTGGAATTCAGGGTGAAGCCTaGGATGTGGGCACAGGAGAC +
Preference number: 4 (lower is better)
Translates to: WLEKGAPGPARLTSVRFGIQGEA*DVGTGD
Trigger: GTCTCCTGTGCCCACATCCCAGGCTTCACCCTGAAT...TCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp ACTTTATTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTCTCCCACTGCGACTCTaGCTCCGACCCCCGTCGTTT +
Preference number: 4 (lower is better)
Translates to: TLLDTAWMPGPGRPHTLPLPLRL*LRPPSF
Trigger: AAACGACGGGGGTCGGAGTCAGAGTCGCAGTGGGAG...AGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAATAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR TCA 90 bp TGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCGTTCATCATCAGCATTaGATTCCGCCGGCCAAAGCG +
Preference number: 4 (lower is better)
Translates to: WTSLLAGERSPRPGSADIVHHQH*IPPAKA
Trigger: CGCTTTGGCCGGCGGAATTCAATGCTGATGATGAAC...GATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR TCA 90 bp AGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCTCCTGGGATGTTCATCATCAGCATTaGATTCCGCCGGCCAAAGCG +
Preference number: 4 (lower is better)
Translates to: RVGRSRPAERVAIATSWDVHHQH*IPPAKA
Trigger: CGCTTTGGCCGGCGGAATTCAATGCTGATGATGAAC...ATCCCAGGAGGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp TCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCCGAACACCTGGGCGATaGGGATGCCGACGACGATGC +
Preference number: 4 (lower is better)
Translates to: SHGNSVALSAKETRTRQPRTPGR*GCRRRC
Trigger: GCATCGTCGTCGGCATCCTCATCGCCCAGGTGTTCG...GGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000674765.1
CDS-3UTR TCA 90 bp CTCCATGTCTTCTTGAGCAGTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGCAGCACCACAGCGATaGGGATGGGCTGGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: LHVFLSSEFAGSHRPSSHAAPQR*GWAGGR
Trigger: CCTACCGCCAGCCCATCCTCATCGCTGTGGTGCTGC...ATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp TTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTAATCCTAATGGAGCCTaGCCCCTAGAGTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: LLAGERSPRPGSADICQVNPNGA*PLEWGD
Trigger: ATCTCCCCACTCTAGGGGTCAGGCTCCATTAGGATT...AACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp AGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCTCCTGGGATTGTCTTCTTGAGCAGTaGGTTTGCAGGCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: RVGRSRPAERVAIATSWDCLLEQ*VCRLPQ
Trigger: CTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACA...ATCCCAGGAGGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp ATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGGCTGGTGGCTCTGGCTaGGCCGGGTACGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ILEPLSPEYSSGHHCWLEAGGSG*AGYAGG
Trigger: GCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGC...CTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR GCA 90 bp CTGACCCCTAGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCGCATCTCAAAGGACTTaGCCAGTTTCGAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LTPRVGRSRPAERVAIATASQRT*PVSRSP
Trigger: TGGGCTTCTCGAAACTGGGCAAGTCCTTTGAGATGC...GGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCTAGGGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp GGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGGACCCGTCAGCTTCTTaGTGCTGGGCTCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: GSHRPSSHGNSVALSAKEDPSAS*CWAPWQ
Trigger: CTGCCATGGAGCCCAGCAGCAAGAAGCTGACGGGTC...CTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp ATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACGGCAGCACGATGCACTaGAGCAGGGCCGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: MVIVWPSVQRRLEPGSPDGSTMH*SRAGMK
Trigger: CTTCATCCCGGCCCTGCTGCAGTGCATCGTGCTGCC...GTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000674765.1
CDS-3UTR GCA 90 bp GGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGAGCTGCTGGGACAGCTaGAGCACCACAGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: GSHRPSSHGNSVALSAKESCWDS*STTAMR
Trigger: CCTCATCGCTGTGGTGCTGCAGCTGTCCCAGCAGCT...CTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp GGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGGCATACACAGGCTGCTaGACCCCCGCCTTCTCGAAG +
Preference number: 4 (lower is better)
Translates to: GLVSTLRHGTIQGEAWDVAYTGC*TPAFSK
Trigger: CTTCGAGAAGGCGGGGGTGCAGCAGCCTGTGTATGC...CACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp GGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGGCATACACAGGCTGCTaGACCCCCGCCTTCTCGAAG +
Preference number: 4 (lower is better)
Translates to: GSHRPSSHGNSVALSAKEAYTGC*TPAFSK
Trigger: CTTCGAGAAGGCGGGGGTGCAGCAGCCTGTGTATGC...CTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp CTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCTGGTCTCCTGCTCCCTaGCGTGCTCACTCGGGGACC +
Preference number: 4 (lower is better)
Translates to: LLMVIVWPSVQRRLEPGSWSPAP*RAHSGT
Trigger: GGTCCCCGAGTGAGCACGCCAGGGAGCAGGAGACCA...GCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp AGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCACGACGATGCCCAGCTaGTGCAGGGTGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SPEYSSGHHCWLEKGAPGTTMPS*CRVPRA
Trigger: GGCCCTGGGCACCCTGCACCAGCTGGGCATCGTCGT...GCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR CCA 90 bp ACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCGATACCGGAGCCAATaGTGGCATACACAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TSLLAGERSPRPGSADICRYRSQ*WHTQAA
Trigger: AGCAGCCTGTGTATGCCACCATTGGCTCCGGTATCG...ACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp ACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGGGCACAGGAGACGACATCATTGCTGGCTaGAGAAAGGAGCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TLRHGTIQGEAWDVGTGDDIIAG*RKEPQA
Trigger: GGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTC...GTCTCCTGTGCCCACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp CTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACTGGCCCTTCCCCTCTCCGCCCACAATGAAATTTaGGGTCCAGTTGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LSAKETRTRQPRLALPLSAHNEI*GPVGEA
Trigger: GGCTTCTCCAACTGGACCTCAAATTTCATTGTGGGC...GGAGAGGGGAAGGGCCAGTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp CATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCGCCCACAATGAAATTTaGGGTCCAGTTGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: HHCWLEKGAPGPARLTSVAHNEI*GPVGEA
Trigger: GGCTTCTCCAACTGGACCTCAAATTTCATTGTGGGC...GACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR GCA 90 bp TTGACAGCTCATTGGGCCCATACAAAGAACGTGGTTCATTTTGTGTGTGTGGGGTCCCGCTCAGGCTCGTaGTCCGGTCCGGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: LTAHWAHTKNVVHFVCVGSRSGS*SGPGTP
Trigger: GGGAGTCCCCGGACCGGAGCACGAGCCTGAGCGGGA...CCCCACACACACAAAATGAACCACGTTCTTTGTATGGGCCCAATGAGCTGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR GCA 90 bp GTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACTGGCCCTTCCCAGAAGGAGCCAATCATaGCCCCAACAGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: VALSAKETRTRQPRLALPRRSQS*PQQKRW
Trigger: CCATCTTTTCTGTTGGGGGCATGATTGGCTCCTTCT...GGGAAGGGCCAGTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp TTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACGCATCTCAAAGGACTTaGCCAGTTTCGAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: FWTSLLAGERSPRPGSADASQRT*PVSRSP
Trigger: TGGGCTTCTCGAAACTGGGCAAGTCCTTTGAGATGC...GTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR GCA 90 bp CCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCCGTCAGCTTCTTGCTaGTGGGCTCCATGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: PSSHGNSVALSAKETRTRPSASC*WAPWQR
Trigger: GCGCTGCCATGGAGCCCAGCAGCAAGAAGCTGACGG...CCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp GGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCCAGGGAGCCAAGCACTaGTCCTCCCACGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GPLLMVIVWPSVQRRLEPQGAKH*SSHGQH
Trigger: ATGCTGGCCGTGGGAGGAGCAGTGCTTGGCTCCCTG...GGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp TGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTTTCTCCCGCATCATCTaGCGACTCTCTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: CWLEKGAPGPARLTSVRFFSRII*RLSSFI
Trigger: GATGAAGGAAGAGAGTCGGCAGATGATGCGGGAGAA...AAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR GCA 90 bp AGTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCGCATACACAGGCTGCTaGACCCCCGCCTTCTCGAAG +
Preference number: 4 (lower is better)
Translates to: SEFAGSHRPSSHGNSVALAYTGC*TPAFSK
Trigger: CTTCGAGAAGGCGGGGGTGCAGCAGCCTGTGTATGC...GAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp ACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCTTCACCCACATACATaGGCACGAAGCCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: TSLLAGERSPRPGSADICLHPHT*ARSLWS
Trigger: TGACCACAGGCTTCGTGCCCATGTATGTGGGTGAAG...ACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR CCA 90 bp AGCTGCTCCAGCAGTGCTAGCGCGATGGTCATGAGTATGGCACAACCCGCCATGCGATACCGGAGCCAATaGTGGCATACACAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SCSSSASAMVMSMAQPAMRYRSQ*WHTQAA
Trigger: AGCAGCCTGTGTATGCCACCATTGGCTCCGGTATCG...CATGGCGGGTTGTGCCATACTCATGACCATCGCGCTAGCACTGCTGGAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
CDS-3UTR CCA 90 bp GGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGCCGGGCTGGTGATCTaGGGCGACTCACACTTGGGA +
Preference number: 4 (lower is better)
Translates to: GPLLMVIVWPSVQRRLEPAGLVI*GDSHLG
Trigger: TCCCAAGTGTGAGTCGCCCCAGATCACCAGCCCGGC...GGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp TGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTGGAGACATCTGTCAGGTTTaGAAGTCTCATCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: WLEKGAPGPARLTSVRFGDICQV*KSHPAA
Trigger: GGCAGCTGGATGAGACTTCCAAACCTGACAGATGTC...TCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR CCA 90 bp TGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTGACATCTGTCAGGTTTaGAAGTCTCATCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: CWLEKGAPGPARLTSVRFDICQV*KSHPAA
Trigger: GGCAGCTGGATGAGACTTCCAAACCTGACAGATGTC...AAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR CCA 90 bp CTGACCCCTAGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCGCCATAGCCACCTCCTaGGATAGAAGCTTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: LTPRVGRSRPAERVAIATAIATS*DRSFVV
Trigger: AACTACAAAGCTTCTATCCCAGGAGGTGGCTATGGC...GGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCTAGGGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp TTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTGCTAGGGAGACTTTATATAGCTaGGAGATGGAGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LDTAWMPGPGRPHTLPARETLYS*EMEGCP
Trigger: GGGGCAGCCCTCCATCTCCCAGCTATATAAAGTCTC...CCTAGCAGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR TCA 90 bp AAGGCAAGTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGTTTCGAGAAGCCCATaGGCACGGCGGACACGAAGG +
Preference number: 4 (lower is better)
Translates to: KASVSTGLSLHPQAWNHSVSRSP*ARRTRR
Trigger: CCTTCGTGTCCGCCGTGCTCATGGGCTTCTCGAAAC...TGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACACTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp AGTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCGGTCCTTGTTGCCCATaGTGGAGTCCAGGCCGAACA +
Preference number: 4 (lower is better)
Translates to: SEFAGSHRPSSHGNSVALGPCCP*WSPGRT
Trigger: TGTTCGGCCTGGACTCCATCATGGGCAACAAGGACC...GAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000674765.1
CDS-3UTR TCA 90 bp GGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACAGCTCCAGGATGGTaGCCTTCTTCTCCCGCATCA +
Preference number: 4 (lower is better)
Translates to: GSHRPSSHGNSVALSAKETAPGW*PSSPAS
Trigger: TGATGCGGGAGAAGAAGGTCACCATCCTGGAGCTGT...CTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp ATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACCTAGCGCGATGGTCATaGGTATGGCACAACCCGCCA +
Preference number: 4 (lower is better)
Translates to: MVIVWPSVQRRLEPGSPDLARWS*VWHNPP
Trigger: TGGCGGGTTGTGCCATACTCATGACCATCGCGCTAG...GTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp TTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTAGCACATGCCCACAATaGAATTTGAGGTCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LLAGERSPRPGSADICQVSTCPQ*NLRSSW
Trigger: CCAACTGGACCTCAAATTTCATTGTGGGCATGTGCT...AACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp AGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGTGGAACCATTCAGGGTaGAGCCTGGGATGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SLQAPTGPLLMVIVWPSVWNHSG*SLGCGH
Trigger: GTGCCCACATCCCAGGCTTCACCCTGAATGGTTCCA...CACTGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCCTGCAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp AGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCTCCTGGGATTACAGATTAGCTGGGTaGAGAAGGCAAGTGTCTCGA +
Preference number: 4 (lower is better)
Translates to: RVGRSRPAERVAIATSWDYRLAG*RRQVSR
Trigger: TCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTA...ATCCCAGGAGGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp CACTTACTTCTGTCTCACTCCCATCCAAACCTCCTACCCTCAATCCACAAGCATTCCTGCTCCCTGGCGTaGTCACTCGGGGACCCGCGA +
Preference number: 4 (lower is better)
Translates to: HLLLSHSHPNLLPSIHKHSCSLA*SLGDPR
Trigger: TCGCGGGTCCCCGAGTGAGCACGCCAGGGAGCAGGA...ATGCTTGTGGATTGAGGGTAGGAGGTTTGGATGGGAGTGAGACAGAAGTAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR GCA 90 bp CCAGCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTAGTCGTCGTTTGGTCTCCTaGTCCCTGGCGTGCTCACTC +
Preference number: 4 (lower is better)
Translates to: PALQISWVKKASVSTGLSRRLVS*SLACSL
Trigger: GAGTGAGCACGCCAGGGAGCAGGAGACCAAACGACG...ACTAAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp GTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATAGGTCCAGCCCTACAGATGCTGGTGGCTCTGGCTaGGCCGGGTACGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VVHSSISVSLGHRSSPTDAGGSG*AGYAGG
Trigger: GCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGC...ATCTGTAGGGCTGGACCTATGTCCTAAGGACACACTAATCGAACTATGAACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp CCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGGGCACAGGAGGCATCTCAAAGGACTTaGCCAGTTTCGAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: PPSGMEPFRVKPGMWAQEASQRT*PVSRSP
Trigger: TGGGCTTCTCGAAACTGGGCAAGTCCTTTGAGATGC...CTCCTGTGCCCACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp GGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGACCCGTCAGCTTCTTaGTGCTGGGCTCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: GPLLMVIVWPSVQRRLEPDPSAS*CWAPWQ
Trigger: CTGCCATGGAGCCCAGCAGCAAGAAGCTGACGGGTC...GGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp CTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACTGGCCCTTCCCCTCTCCCCGCCTTCTCGAAGATaGTCGTGGAGTAATAGAAGA +
Preference number: 4 (lower is better)
Translates to: LSAKETRTRQPRLALPLSPPSRR*SWSNRR
Trigger: TCTTCTATTACTCCACGAGCATCTTCGAGAAGGCGG...GGAGAGGGGAAGGGCCAGTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp GAGGGGGCAATTCCAAATGAAATGAACACAGGGCAGCTTGACAGCTCATTGGGCGTGGCATACACAGGCTaGTGCACCCCCGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: EGAIPNEMNTGQLDSSLGVAYTG*CTPAFS
Trigger: CGAGAAGGCGGGGGTGCAGCAGCCTGTGTATGCCAC...GCCCAATGAGCTGTCAAGCTGCCCTGTGTTCATTTCATTTGGAATTGCCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR GCA 90 bp GTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGAACTCCCTGCACTCCAGTaGTCCCAACTGGTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: VSRQGLVSTLRHGTIQGELPALQ*SQLVSG
Trigger: ACCTGAGACCAGTTGGGAGCACTGGAGTGCAGGGAG...TTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp ATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACCTCCCTGCACTCCAGTaGTCCCAACTGGTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: MVIVWPSVQRRLEPGSPDLPALQ*SQLVSG
Trigger: ACCTGAGACCAGTTGGGAGCACTGGAGTGCAGGGAG...GTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp CTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTGGAAGTAGCCGTTGCAGTGGTTaGAACCCCACTTACTTCTGT +
Preference number: 4 (lower is better)
Translates to: LEKGAPGPARLTSVRFGSSRCSG*NPTYFC
Trigger: ACAGAAGTAAGTGGGGTTGCAACCACTGCAACGGCT...ACTTCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR GCA 90 bp TGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTGCTAGGCAGTGAGGGTAGTTCATaGAAGGAAGTGTCAGACCAC +
Preference number: 4 (lower is better)
Translates to: WTQLGCQDLVGPTHCLLGSEGSS*KEVSDH
Trigger: GTGGTCTGACACTTCCTTGCATGAACTACCCTCACT...GCCTAGCAGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR CCA 90 bp ACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGGGCACAGGAGACCTTCACCCACATACATaGGCACGAAGCCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: TLRHGTIQGEAWDVGTGDLHPHT*ARSLWS
Trigger: TGACCACAGGCTTCGTGCCCATGTATGTGGGTGAAG...GTCTCCTGTGCCCACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp ATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACGTGAAGCCTGGGATGTaGGCACAGGAGACTCAGGCT +
Preference number: 4 (lower is better)
Translates to: MVIVWPSVQRRLEPGSPDVKPGM*AQETQA
Trigger: AGCCTGAGTCTCCTGTGCCCACATCCCAGGCTTCAC...GTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp CATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCGCCATAGCCACCTCCTaGGATAGAAGCTTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: HHCWLEKGAPGPARLTSVAIATS*DRSFVV
Trigger: AACTACAAAGCTTCTATCCCAGGAGGTGGCTATGGC...GACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp CTGACCCCTAGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCTTGGGTAGGAAGAGATaGGAAGGGGCAAATCCTAAT +
Preference number: 4 (lower is better)
Translates to: LTPRVGRSRPAERVAIATLGRKR*EGANPN
Trigger: ATTAGGATTTGCCCCTTCCCATCTCTTCCTACCCAA...GGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCTAGGGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp TGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTGTACGTGTAAGGGACTaGATCCTGAGTCGAAGTCTA +
Preference number: 4 (lower is better)
Translates to: CWLEKGAPGPARLTSVRFVRVRD*ILSRSL
Trigger: TAGACTTCGACTCAGGATCCAGTCCCTTACACGTAC...AAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR TCA 90 bp CCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCTCCCACGGCCAGCATaGGGCGACCCGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PLSPEYSSGHHCWLEKGALPRPA*GDPSAS
Trigger: AGAAGCTGACGGGTCGCCTCATGCTGGCCGTGGGAG...GGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp CTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCGGTCCTTGTTGCCCATaGTGGAGTCCAGGCCGAACA +
Preference number: 4 (lower is better)
Translates to: LLMVIVWPSVQRRLEPGSGPCCP*WSPGRT
Trigger: TGTTCGGCCTGGACTCCATCATGGGCAACAAGGACC...GCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000674765.1
CDS-3UTR TCA 90 bp TGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAATAGAAGACAGCGTTaGTGCCAGACAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: WVKKASVSTGLSLHPQAWNRRQR*CQTAAG
Trigger: CCCAGCAGCTGTCTGGCATCAACGCTGTCTTCTATT...CCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACACTTGCCTTCTTCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp GGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGAATCCTAATGGAGCCTaGCCCCTAGAGTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: GLVSTLRHGTIQGEAWDVNPNGA*PLEWGD
Trigger: ATCTCCCCACTCTAGGGGTCAGGCTCCATTAGGATT...CACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp CCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCAGCTGCCTGGGCGATaGGGATGCCGACGACGATGC +
Preference number: 4 (lower is better)
Translates to: PLSPEYSSGHHCWLEKGAQLPGR*GCRRRC
Trigger: GCATCGTCGTCGGCATCCTCATCGCCCAGGCAGCTG...GGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475162.3
CDS-3UTR GCA 90 bp GGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGCGAAGTCTAAGCCGTTaGAGTGGTTGCAACCCCACT +
Preference number: 4 (lower is better)
Translates to: GSHRPSSHGNSVALSAKERSLSR*SGCNPT
Trigger: AGTGGGGTTGCAACCACTGCAACGGCTTAGACTTCG...CTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR CCA 90 bp GAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGATGCTGCTGGGCTCCATaGCAGCGCTGCGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: EPLSPEYSSGHHCWLEKGCCWAP*QRCAGG
Trigger: GCCACCAGCGCAGCGCTGCCATGGAGCCCAGCAGCA...TCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp TTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCATGCTGCTGGGCTCCATaGCAGCGCTGCGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSPEYSSGHHCWLEKGAPCCWAP*QRCAGG
Trigger: GCCACCAGCGCAGCGCTGCCATGGAGCCCAGCAGCA...TGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp AGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCTCAGCTTCTTGCTGCTaGGCTCCATGGCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SPEYSSGHHCWLEKGAPGSASCC*APWQRC
Trigger: GCAGCGCTGCCATGGAGCCCAGCAGCAAGAAGCTGA...GCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp GCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTAGTCTCCCCCACGAAGGGCTGTaGGTGACACTTCACCCACAT +
Preference number: 4 (lower is better)
Translates to: ALQISWVKKASVSTGLSLPHEGL*VTLHPH
Trigger: ATGTGGGTGAAGTGTCACCCACAGCCCTTCGTGGGG...GAGACTAAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp GAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAACGACGATGCCCAGCTaGTGCAGGGTGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: EPLSPEYSSGHHCWLEKGTTMPS*CRVPRA
Trigger: GGCCCTGGGCACCCTGCACCAGCTGGGCATCGTCGT...TCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR CCA 90 bp TGTCAGGTTTGGAAGTCTCATCCAGCTGCCTGTGCTCCTGAGAGATCCTTAGGGATCTCCTGCAGGTCATaGGTCACGTCAGCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: CQVWKSHPAACAPERSLGISCRS*VTSAVP
Trigger: CGGGACAGCTGACGTGACCCATGACCTGCAGGAGAT...CCCTAAGGATCTCTCAGGAGCACAGGCAGCTGGATGAGACTTCCAAACCTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp GGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCAACGGCAATGGCAGCTaGACGTGGACCCTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: GPLLMVIVWPSVQRRLEPNGNGS*TWTLAE
Trigger: TTCAGCCAGGGTCCACGTCCAGCTGCCATTGCCGTT...GGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp GCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTAGTCTCGTGAAGCCTGGGATGTaGGCACAGGAGACTCAGGCT +
Preference number: 4 (lower is better)
Translates to: ALQISWVKKASVSTGLSLVKPGM*AQETQA
Trigger: AGCCTGAGTCTCCTGTGCCCACATCCCAGGCTTCAC...GAGACTAAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp TTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTTGGGTAGGAAGAGATaGGAAGGGGCAAATCCTAAT +
Preference number: 4 (lower is better)
Translates to: LLAGERSPRPGSADICQVLGRKR*EGANPN
Trigger: ATTAGGATTTGCCCCTTCCCATCTCTTCCTACCCAA...AACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp CCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGGGCACAGGAGCTCATGGTAATAGTGTaGCCCTCAGTGCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PPSGMEPFRVKPGMWAQELMVIV*PSVQRR
Trigger: TCTCCTTTGCACTGAGGGCCACACTATTACCATGAG...CTCCTGTGCCCACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp ACTTTATTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTAATAAACCTTGCTGCTaGGCTCCATGGCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: TLLDTAWMPGPGRPHTLPNKPCC*APWQRC
Trigger: GCAGCGCTGCCATGGAGCCCAGCAGCAAGGTTTATT...AGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAATAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR CCA 90 bp ACTTTATTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTTGGACTGTCCAGGGCTaGAGTGAGGGTAGTTCATGC +
Preference number: 4 (lower is better)
Translates to: TLLDTAWMPGPGRPHTLPWTVQG*SEGSSC
Trigger: GCATGAACTACCCTCACTCCAGCCCTGGACAGTCCA...AGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAATAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR TCA 90 bp AAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGGGACCAGAGCGTGGTaGGCGTGGTGGGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: KILEPLSPEYSSGHHCWLGTRAW*AWWAGC
Trigger: GCATCCTGCCCACCACGCTCACCACGCTCTGGTCCC...CAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR TCA 90 bp CGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGAGCACATGCCCACAATaGAATTTGAGGTCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RQGLVSTLRHGTIQGEAWSTCPQ*NLRSSW
Trigger: CCAACTGGACCTCAAATTTCATTGTGGGCATGTGCT...CCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp CTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTGGAAGTGGAGCCGTTAAGTCCTaGATATTCTTCTGGACATCA +
Preference number: 4 (lower is better)
Translates to: LEKGAPGPARLTSVRFGSGAVKS*IFFWTS
Trigger: TGATGTCCAGAAGAATATTCAGGACTTAACGGCTCC...ACTTCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR GCA 90 bp GGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGTTCTCCCGCATCATCTaGCGACTCTCTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: GLVSTLRHGTIQGEAWDVFSRII*RLSSFI
Trigger: GATGAAGGAAGAGAGTCGGCAGATGATGCGGGAGAA...CACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp TTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCACAGGGTCCGCCGGCCTaGTCGCTCCACCACAAACAG +
Preference number: 4 (lower is better)
Translates to: LSPEYSSGHHCWLEKGAPQGPPA*SLHHKQ
Trigger: CTGTTTGTGGTGGAGCGAGCAGGCCGGCGGACCCTG...TGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR GCA 90 bp CTTTATTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTGATAAATAAACCTTGCTaGTGGGCTCCATGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LYWTQLGCQDLVGPTHCLINKPC*WAPWQR
Trigger: GCGCTGCCATGGAGCCCAGCAGCAAGGTTTATTTAT...CAGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR GCA 90 bp TTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTGCTAGGATGGTAACCCCACAATaGAACACTGTGGTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: LDTAWMPGPGRPHTLPARMVTPQ*NTVVRD
Trigger: GTCTCTAACCACAGTGTTGCATTGTGGGGTTACCAT...CCTAGCAGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR CCA 90 bp CTCCATGTCTTCTTGAGCAGTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATCGATACCGGAGCCAATaGTGGCATACACAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LHVFLSSEFAGSHRPSSHRYRSQ*WHTQAA
Trigger: AGCAGCCTGTGTATGCCACCATTGGCTCCGGTATCG...ATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp TCCAGGCCAGCAGAACGGGTGGCCATAGCCACCTCCTGGGATAGAAGCTTTGTACCACAAAGCCAAAGATaGCCACGATGCTCAGATAGG +
Preference number: 4 (lower is better)
Translates to: SRPAERVAIATSWDRSFVPQSQR*PRCSDR
Trigger: CCTATCTGAGCATCGTGGCCATCTTTGGCTTTGTGG...TACAAAGCTTCTATCCCAGGAGGTGGCTATGGCCACCCGTTCTGCTGGCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp ATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGGCCGGGCTGGTGATCTaGGGCGACTCACACTTGGGA +
Preference number: 4 (lower is better)
Translates to: ILEPLSPEYSSGHHCWLEAGLVI*GDSHLG
Trigger: TCCCAAGTGTGAGTCGCCCCAGATCACCAGCCCGGC...CTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp GGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGTTCATCATCAGCATTaGATTCCGCCGGCCAAAGCG +
Preference number: 4 (lower is better)
Translates to: GPLLMVIVWPSVQRRLEPVHHQH*IPPAKA
Trigger: CGCTTTGGCCGGCGGAATTCAATGCTGATGATGAAC...GGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp AAGGCAAGTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAAATAGAAGACAGCGTTaGTGCCAGACAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KASVSTGLSLHPQAWNHSNRRQR*CQTAAG
Trigger: CCCAGCAGCTGTCTGGCATCAACGCTGTCTTCTATT...TGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACACTTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp AAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGAGCAGGCCGGGCTGGTaGTCTGGGGCGACTCACACT +
Preference number: 4 (lower is better)
Translates to: KILEPLSPEYSSGHHCWLSRPGW*SGATHT
Trigger: AGTGTGAGTCGCCCCAGATCACCAGCCCGGCCTGCT...CAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp ATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGCAGGCCCGGCTCGGCTaGCATCTGTCAGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: ILEPLSPEYSSGHHCWLEQARLG*HLSGLE
Trigger: TTCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTG...CTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR TCA 90 bp TGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCAACCTGTTGCTTGTCTaGATAGATTTGAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: WTSLLAGERSPRPGSADINLLLV*IDLSNS
Trigger: ACTGTTGCTCAAATCTATTCAGACAAGCAACAGGTT...GATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR TCA 90 bp CCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGTGTCTTCTTGAGCAGTaGGTTTGCAGGCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: PSSHGNSVALSAKETRTRCLLEQ*VCRLPQ
Trigger: CTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACA...CCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp TATTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTGCTATGCCCCACAGATGTATaGACAGGTCCAATCTTCCAT +
Preference number: 4 (lower is better)
Translates to: YWTQLGCQDLVGPTHCLLCPTDV*TGPIFH
Trigger: ATGGAAGATTGGACCTGTTCATACATCTGTGGGGCA...TAGCAGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR GCA 90 bp TCCAGGCCAGCAGAACGGGTGGCCATAGCCACCTCCTGGGATAGAAGCTTTGTAAGAAGGAGCCAATCATaGCCCCAACAGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: SRPAERVAIATSWDRSFVRRSQS*PQQKRW
Trigger: CCATCTTTTCTGTTGGGGGCATGATTGGCTCCTTCT...TACAAAGCTTCTATCCCAGGAGGTGGCTATGGCCACCCGTTCTGCTGGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp GTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGAAGCATCTCAAAGGACTTaGCCAGTTTCGAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: VSRQGLVSTLRHGTIQGEASQRT*PVSRSP
Trigger: TGGGCTTCTCGAAACTGGGCAAGTCCTTTGAGATGC...TTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp TTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCAGCACGATGCACTaGAGCAGGGCCGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: LSPEYSSGHHCWLEKGAPGSTMH*SRAGMK
Trigger: CTTCATCCCGGCCCTGCTGCAGTGCATCGTGCTGCC...TGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR GCA 90 bp TCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCCAAAGATGGCCACGATaGTCAGATAGGACATCCAGG +
Preference number: 4 (lower is better)
Translates to: SHGNSVALSAKETRTRQPQRWPR*SDRTSR
Trigger: CCTGGATGTCCTATCTGAGCATCGTGGCCATCTTTG...GGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp TTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCATCCAGGCCGAACACCTaGGCGATGAGGATGCCGACG +
Preference number: 4 (lower is better)
Translates to: LSPEYSSGHHCWLEKGAPSRPNT*AMRMPT
Trigger: CGTCGGCATCCTCATCGCCCAGGTGTTCGGCCTGGA...TGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR CCA 90 bp TGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAGTTGCTCCACATACTaGAAGCACATGCCCACAATG +
Preference number: 4 (lower is better)
Translates to: WVKKASVSTGLSLHPQAWSCSTY*KHMPTM
Trigger: CATTGTGGGCATGTGCTTCCAGTATGTGGAGCAACT...CCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACACTTGCCTTCTTCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp GAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGATCAGCCCCCAGGGGATaGAACAGCTCCTCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: EPLSPEYSSGHHCWLEKGSAPRG*NSSSGV
Trigger: GACACCCGAGGAGCTGTTCCATCCCCTGGGGGCTGA...TCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp CAGGTTTGGAAGTCTCATCCAGCTGCCTGTGCTCCTGAGAGATCCTTAGGGCTGGACATCTGTCAGGTTTaGAAGTCTCATCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QVWKSHPAACAPERSLGLDICQV*KSHPAA
Trigger: GGCAGCTGGATGAGACTTCCAAACCTGACAGATGTC...CAGCCCTAAGGATCTCTCAGGAGCACAGGCAGCTGGATGAGACTTCCAAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp AGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCTCCTGGGATATTAATTTGAGTGGTTaGGTAGGAAGAGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: RVGRSRPAERVAIATSWDINLSG*VGRDGK
Trigger: CTTCCCATCTCTTCCTACCCAACCACTCAAATTAAT...ATCCCAGGAGGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp CTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTGGAAGTGTAACAGGAGTGAGGTaGTGTATTTACAAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LEKGAPGPARLTSVRFGSVTGVR*CIYKLA
Trigger: AGCCAACTTGTAAATACACCACCTCACTCCTGTTAC...ACTTCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
3UTR CAA 72 bp ATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCTaGAGCAGTGAGTTTGCAGGCTCCCACAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: IYTQQGRSLHVF*SSEFAGSHRPS
Trigger: AGAGGGCCTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACATGGAGACTCCTGCCCTGTTGTGTATAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR CAA 72 bp CTGGATCCTGAGTCGAAGTCTAAGCCGTTGCAGTGGTaGCAACCCCACTTACTTCTGTCTCACTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: LDPESKSKPLQW*QPHLLLSHSHP
Trigger: TGGATGGGAGTGAGACAGAAGTAAGTGGGGTTGCAACCACTGCAACGGCTTAGACTTCGACTCAGGATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR CAA 72 bp TGGAAGCACATGCCCACAATGAAATTTGAGGTCCAGTaGGAGAAGCCTGCAACGGCAATGGCAGCTGGACGT +
Preference number: 4 (lower is better)
Translates to: WKHMPTMKFEVQ*EKPATAMAAGR
Trigger: ACGTCCAGCTGCCATTGCCGTTGCAGGCTTCTCCAACTGGACCTCAAATTTCATTGTGGGCATGTGCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
CDS-3UTR TCA 90 bp CCAGCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTAGTGTCTCCATGTCTTCTTaGGCAGTGAGTTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PALQISWVKKASVSTGLSVSMSS*AVSLQA
Trigger: AGCCTGCAAACTCACTGCTCAAGAAGACATGGAGAC...ACTAAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp AAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGCGTGGTGGGCAGGATaGTCTCCCCATAGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: KILEPLSPEYSSGHHCWLAWWAG*SPHSGG
Trigger: TCCACCGCTATGGGGAGAGCATCCTGCCCACCACGC...CAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR GCA 90 bp GCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTAGTCTCTTCTCCCGCATCATCTaGCGACTCTCTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: ALQISWVKKASVSTGLSLFSRII*RLSSFI
Trigger: GATGAAGGAAGAGAGTCGGCAGATGATGCGGGAGAA...GAGACTAAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp TCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCCCGCCTTCTCGAAGATaGTCGTGGAGTAATAGAAGA +
Preference number: 4 (lower is better)
Translates to: SHGNSVALSAKETRTRQPPPSRR*SWSNRR
Trigger: TCTTCTATTACTCCACGAGCATCTTCGAGAAGGCGG...GGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp TGTCAGGTTTGGAAGTCTCATCCAGCTGCCTGTGCTCCTGAGAGATCCTTAGGGTCTTCTGGACATCATTaGTGGCTGGAGAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: CQVWKSHPAACAPERSLGSSGHH*WLEKGA
Trigger: GGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGA...CCCTAAGGATCTCTCAGGAGCACAGGCAGCTGGATGAGACTTCCAAACCTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR GCA 90 bp ACTTTATTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTTCCATAAATAAACCTTaGTGCTGGGCTCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: TLLDTAWMPGPGRPHTLPSINKP*CWAPWQ
Trigger: CTGCCATGGAGCCCAGCAGCAAGGTTTATTTATGGA...AGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAATAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR GCA 90 bp ATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGGAAGTCTCATCCAGCTaGCTGGGCGATGAGGATGCC +
Preference number: 4 (lower is better)
Translates to: ILEPLSPEYSSGHHCWLEEVSSS*LGDEDA
Trigger: GGCATCCTCATCGCCCAGGCAGCTGGATGAGACTTC...CTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475162.3
CDS-3UTR GCA 90 bp GTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCATTTGAGCAACAGTCTTaGTTTTGCCAGCGAGGCCTA +
Preference number: 4 (lower is better)
Translates to: VSLQAPTGPLLMVIVWPSFEQQS*FCQRGL
Trigger: TAGGCCTCGCTGGCAAAAGCAAGACTGTTGCTCAAA...TGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674765.1
CDS-3UTR CCA 90 bp AGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCTTCACCCACATACATaGGCACGAAGCCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SPEYSSGHHCWLEKGAPGLHPHT*ARSLWS
Trigger: TGACCACAGGCTTCGTGCCCATGTATGTGGGTGAAG...GCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR CCA 90 bp CTCCATGTCTTCTTGAGCAGTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGCCCTACAGATTAGCTaGGTGAAGAAGGCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: LHVFLSSEFAGSHRPSSHALQIS*VKKASV
Trigger: GACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGC...ATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp GTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGCCATAGCCACCTCCTaGGATAGAAGCTTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: VSLQAPTGPLLMVIVWPSAIATS*DRSFVV
Trigger: AACTACAAAGCTTCTATCCCAGGAGGTGGCTATGGC...TGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp CAGGTTTGGAAGTCTCATCCAGCTGCCTGTGCTCCTGAGAGATCCTTAGGGCTGTCTAAGCCGTTGCAGTaGTTGCAACCCCACTTACTT +
Preference number: 4 (lower is better)
Translates to: QVWKSHPAACAPERSLGLSKPLQ*LQPHLL
Trigger: AAGTAAGTGGGGTTGCAACCACTGCAACGGCTTAGA...CAGCCCTAAGGATCTCTCAGGAGCACAGGCAGCTGGATGAGACTTCCAAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR TCA 90 bp CAAGTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGGAGCCGTTAAGTCCTaGATATTCTTCTGGACATCA +
Preference number: 4 (lower is better)
Translates to: QVSRQGLVSTLRHGTIQGGAVKS*IFFWTS
Trigger: TGATGTCCAGAAGAATATTCAGGACTTAACGGCTCC...ACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp CAGGTTTGGAAGTCTCATCCAGCTGCCTGTGCTCCTGAGAGATCCTTAGGGCTGGGAGCCGTTAAGTCCTaGATATTCTTCTGGACATCA +
Preference number: 4 (lower is better)
Translates to: QVWKSHPAACAPERSLGLGAVKS*IFFWTS
Trigger: TGATGTCCAGAAGAATATTCAGGACTTAACGGCTCC...CAGCCCTAAGGATCTCTCAGGAGCACAGGCAGCTGGATGAGACTTCCAAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp GGTGTTTTAGCTTATTCACTGTGCGACTTCAGGCACATAACCTCTTTGAGCCTGTGGAACCATTCAGGGTaGAGCCTGGGATGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GVLAYSLCDFRHITSLSLWNHSG*SLGCGH
Trigger: GTGCCCACATCCCAGGCTTCACCCTGAATGGTTCCA...CAGGCTCAAAGAGGTTATGTGCCTGAAGTCGCACAGTGAATAAGCTAAAACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR TCA 90 bp AAGGCAAGTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCATACAGATTAGCTGGGTaGAGAAGGCAAGTGTCTCGA +
Preference number: 4 (lower is better)
Translates to: KASVSTGLSLHPQAWNHSYRLAG*RRQVSR
Trigger: TCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTA...TGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACACTTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp GTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATAGGTCCAGCCCTACAGATAGCTGCTGGGACAGCTaGAGCACCACAGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: VVHSSISVSLGHRSSPTDSCWDS*STTAMR
Trigger: CCTCATCGCTGTGGTGCTGCAGCTGTCCCAGCAGCT...ATCTGTAGGGCTGGACCTATGTCCTAAGGACACACTAATCGAACTATGAACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp AGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCTCTTCTGGACATCATTaGTGGCTGGAGAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SPEYSSGHHCWLEKGAPGSSGHH*WLEKGA
Trigger: GGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGA...GCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR GCA 90 bp TGTCAGGTTTGGAAGTCTCATCCAGCTGCCTGTGCTCCTGAGAGATCCTTAGGGAAGGAGCAGATGAAGTaGTCTGGAAATTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: CQVWKSHPAACAPERSLGKEQMK*SGNSGV
Trigger: CACCCCTGAATTTCCAGAGCACTTCATCTGCTCCTT...CCCTAAGGATCTCTCAGGAGCACAGGCAGCTGGATGAGACTTCCAAACCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR GCA 90 bp GGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCCCAGTATTTTCTGAGTaGCTGCTGTGCATCAAGCAC +
Preference number: 4 (lower is better)
Translates to: GPLLMVIVWPSVQRRLEPPVFSE*LLCIKH
Trigger: GTGCTTGATGCACAGCAGGCACTCAGAAAATACTGG...GGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR CCA 90 bp TGGGATAGAAGCTTTGTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATAGGCCGACCCCCGTCGTTTaGTCTCCTGCTCCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: WDRSFVVHSSISVSLGHRPTPVV*SPAPWR
Trigger: ACGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGG...CCTATGTCCTAAGGACACACTAATCGAACTATGAACTACAAAGCTTCTATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp CTCCATGTCTTCTTGAGCAGTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATAGTTGCTCCACATACTaGAAGCACATGCCCACAATG +
Preference number: 4 (lower is better)
Translates to: LHVFLSSEFAGSHRPSSHSCSTY*KHMPTM
Trigger: CATTGTGGGCATGTGCTTCCAGTATGTGGAGCAACT...ATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp GAGGGGGCAATTCCAAATGAAATGAACACAGGGCAGCTTGACAGCTCATTGGGCGCCCTACAGATTAGCTaGGTGAAGAAGGCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: EGAIPNEMNTGQLDSSLGALQIS*VKKASV
Trigger: GACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGC...GCCCAATGAGCTGTCAAGCTGCCCTGTGTTCATTTCATTTGGAATTGCCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR CCA 90 bp GCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTAGTCTCCTCATGGTAATAGTGTaGCCCTCAGTGCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: ALQISWVKKASVSTGLSLLMVIV*PSVQRR
Trigger: TCTCCTTTGCACTGAGGGCCACACTATTACCATGAG...GAGACTAAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp GCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTAGTCTCGCAGATGAAGTGCTCTaGAAATTCAGGGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: ALQISWVKKASVSTGLSLADEVL*KFRGEG
Trigger: TCCTTCACCCCTGAATTTCCAGAGCACTTCATCTGC...GAGACTAAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR CAA 72 bp TGTAAGGGACTGGATCCTGAGTCGAAGTCTAAGCCGTaGCAGTGGTTGCAACCCCACTTACTTCTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: CKGLDPESKSKP*QWLQPHLLLSH
Trigger: GTGAGACAGAAGTAAGTGGGGTTGCAACCACTGCAACGGCTTAGACTTCGACTCAGGATCCAGTCCCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR TCA 90 bp TGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCTGTTGCTTGTCTaGATAGATTTGAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: WVKKASVSTGLSLHPQAWNLLLV*IDLSNS
Trigger: ACTGTTGCTCAAATCTATTCAGACAAGCAACAGGTT...CCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACACTTGCCTTCTTCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp GAGGGGGCAATTCCAAATGAAATGAACACAGGGCAGCTTGACAGCTCATTGGGCTACAGATTAGCTGGGTaGAGAAGGCAAGTGTCTCGA +
Preference number: 4 (lower is better)
Translates to: EGAIPNEMNTGQLDSSLGYRLAG*RRQVSR
Trigger: TCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTA...GCCCAATGAGCTGTCAAGCTGCCCTGTGTTCATTTCATTTGGAATTGCCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR TCA 90 bp AAGAGGACACTGATGAGAGGTACGTGTAAGGGACTGGATCCTGAGTCGAAGTCTCATCAAGCACTGTACTaGATAGTGCTGAGGACCCAC +
Preference number: 4 (lower is better)
Translates to: KRTLMRGTCKGLDPESKSHQALY*IVLRTH
Trigger: GTGGGTCCTCAGCACTATTCAGTACAGTGCTTGATG...AGACTTCGACTCAGGATCCAGTCCCTTACACGTACCTCTCATCAGTGTCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR GCA 90 bp TCCTGGGATAGAAGCTTTGTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATCCGTCAGCTTCTTGCTaGTGGGCTCCATGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: SWDRSFVVHSSISVSLGHPSASC*WAPWQR
Trigger: GCGCTGCCATGGAGCCCAGCAGCAAGAAGCTGACGG...ATGTCCTAAGGACACACTAATCGAACTATGAACTACAAAGCTTCTATCCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp TTTGTTAAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCCAGGGTCCGCCGGCCTaGTCGCTCCACCACAAACAG +
Preference number: 4 (lower is better)
Translates to: FVKILEPLSPEYSSGHHCQGPPA*SLHHKQ
Trigger: CTGTTTGTGGTGGAGCGAGCAGGCCGGCGGACCCTG...GCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTTAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp GTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATAGGTCCAGCCCTACAGATCCCCACGAAGGGCTGTaGGTGACACTTCACCCACAT +
Preference number: 4 (lower is better)
Translates to: VVHSSISVSLGHRSSPTDPHEGL*VTLHPH
Trigger: ATGTGGGTGAAGTGTCACCCACAGCCCTTCGTGGGG...ATCTGTAGGGCTGGACCTATGTCCTAAGGACACACTAATCGAACTATGAACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp TCCTGGGATAGAAGCTTTGTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATTCCAGGCCGAACACCTaGGCGATGAGGATGCCGACG +
Preference number: 4 (lower is better)
Translates to: SWDRSFVVHSSISVSLGHSRPNT*AMRMPT
Trigger: CGTCGGCATCCTCATCGCCCAGGTGTTCGGCCTGGA...ATGTCCTAAGGACACACTAATCGAACTATGAACTACAAAGCTTCTATCCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000674765.1
CDS-3UTR CCA 90 bp CTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCTTGGGTAGGAAGAGATaGGAAGGGGCAAATCCTAAT +
Preference number: 4 (lower is better)
Translates to: LLMVIVWPSVQRRLEPGSLGRKR*EGANPN
Trigger: ATTAGGATTTGCCCCTTCCCATCTCTTCCTACCCAA...GCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp AGTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCGTAACAGGAGTGAGGTaGTGTATTTACAAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: SEFAGSHRPSSHGNSVALVTGVR*CIYKLA
Trigger: AGCCAACTTGTAAATACACCACCTCACTCCTGTTAC...GAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp CACTTACTTCTGTCTCACTCCCATCCAAACCTCCTACCCTCAATCCACAAGCATGGGGGCAATTCCAAATaGAATGAACACAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HLLLSHSHPNLLPSIHKHGGNSK*NEHRAA
Trigger: AGCTGCCCTGTGTTCATTTCATTTGGAATTGCCCCC...ATGCTTGTGGATTGAGGGTAGGAGGTTTGGATGGGAGTGAGACAGAAGTAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR GCA 90 bp TCCTGGGATAGAAGCTTTGTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATGACCCGTCAGCTTCTTaGTGCTGGGCTCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: SWDRSFVVHSSISVSLGHDPSAS*CWAPWQ
Trigger: CTGCCATGGAGCCCAGCAGCAAGAAGCTGACGGGTC...ATGTCCTAAGGACACACTAATCGAACTATGAACTACAAAGCTTCTATCCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp GGTGTTTTAGCTTATTCACTGTGCGACTTCAGGCACATAACCTCTTTGAGCCTGCCCCAACAGAAAAGATaGCCACTGAGAGGGACCAGA +
Preference number: 4 (lower is better)
Translates to: GVLAYSLCDFRHITSLSLPQQKR*PLRGTR
Trigger: TCTGGTCCCTCTCAGTGGCCATCTTTTCTGTTGGGG...CAGGCTCAAAGAGGTTATGTGCCTGAAGTCGCACAGTGAATAAGCTAAAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR CCA 90 bp TTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCACCCCAACAGAAAAGATaGCCACTGAGAGGGACCAGA +
Preference number: 4 (lower is better)
Translates to: LSPEYSSGHHCWLEKGAPPQQKR*PLRGTR
Trigger: TCTGGTCCCTCTCAGTGGCCATCTTTTCTGTTGGGG...TGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR CCA 90 bp ATATATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTACGACGATGCCCAGCTaGTGCAGGGTGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: IYINILHLYTTGQESPCLTTMPS*CRVPRA
Trigger: GGCCCTGGGCACCCTGCACCAGCTGGGCATCGTCGT...AAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp GAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGATCTTTAGCACACTCTTaGCCCGGTTCTCCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: EPLSPEYSSGHHCWLEKGSLAHS*PGSPRC
Trigger: GCAACGAGGAGAACCGGGCCAAGAGTGTGCTAAAGA...TCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR CCA 90 bp CCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCGCCCTACAGATTAGCTaGGTGAAGAAGGCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: PLSPEYSSGHHCWLEKGAALQIS*VKKASV
Trigger: GACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGC...GGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp GGTCCAGCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTATTAATTTGAGTGGTTaGGTAGGAAGAGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: GPALQISWVKKASVSTGLINLSG*VGRDGK
Trigger: CTTCCCATCTCTTCCTACCCAACCACTCAAATTAAT...AAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGCTGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
3UTR CAA 72 bp CACAGTGAAGATGATGAAGACGTAGGGACCACACAGTaGCTCCACATACTGGAAGCACATGCCCACAATGAA +
Preference number: 4 (lower is better)
Translates to: HSEDDEDVGTTQ*LHILEAHAHNE
Trigger: TTCATTGTGGGCATGTGCTTCCAGTATGTGGAGCAACTGTGTGGTCCCTACGTCTTCATCATCTTCACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
CDS-3UTR TCA 90 bp GCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTAGTCTCAACCTGTTGCTTGTCTaGATAGATTTGAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: ALQISWVKKASVSTGLSLNLLLV*IDLSNS
Trigger: ACTGTTGCTCAAATCTATTCAGACAAGCAACAGGTT...GAGACTAAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp CCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGAACCTGTTGCTTGTCTaGATAGATTTGAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: PSSHGNSVALSAKETRTRNLLLV*IDLSNS
Trigger: ACTGTTGCTCAAATCTATTCAGACAAGCAACAGGTT...CCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp AAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGAATCCTAATGGAGCCTaGCCCCTAGAGTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: KILEPLSPEYSSGHHCWLNPNGA*PLEWGD
Trigger: ATCTCCCCACTCTAGGGGTCAGGCTCCATTAGGATT...CAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR GCA 90 bp TATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCTTGCGTGGTGGGCAGGATaGTCTCCCCATAGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: YINILHLYTTGQESPCLLAWWAG*SPHSGG
Trigger: TCCACCGCTATGGGGAGAGCATCCTGCCCACCACGC...AAGAAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp TTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCATCTTCCTTCATCTCCTaGAGGTCATGGGTCACGTCA +
Preference number: 4 (lower is better)
Translates to: LSPEYSSGHHCWLEKGAPSSFIS*RSWVTS
Trigger: TGACGTGACCCATGACCTGCAGGAGATGAAGGAAGA...TGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR GCA 90 bp TTGACAGCTCATTGGGCCCATACAAAGAACGTGGTTCATTTTGTGTGTGTGGGGCCGCCTTCTCGAAGATaGTCGTGGAGTAATAGAAGA +
Preference number: 4 (lower is better)
Translates to: LTAHWAHTKNVVHFVCVGPPSRR*SWSNRR
Trigger: TCTTCTATTACTCCACGAGCATCTTCGAGAAGGCGG...CCCCACACACACAAAATGAACCACGTTCTTTGTATGGGCCCAATGAGCTGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR GCA 90 bp TCCTGGGATAGAAGCTTTGTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATCTCCCTGCACTCCAGTaGTCCCAACTGGTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: SWDRSFVVHSSISVSLGHLPALQ*SQLVSG
Trigger: ACCTGAGACCAGTTGGGAGCACTGGAGTGCAGGGAG...ATGTCCTAAGGACACACTAATCGAACTATGAACTACAAAGCTTCTATCCCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp CTTGCTTTTGTTAAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATTGGGCACGAAGCCTGTaGTCAGGCCGCAGTACACAC +
Preference number: 4 (lower is better)
Translates to: LAFVKILEPLSPEYSSGHWARSL*SGRSTH
Trigger: GTGTGTACTGCGGCCTGACCACAGGCTTCGTGCCCA...ATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTTAACAAAAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR CCA 90 bp TTTGTTAAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGGCACGAAGCCTGTaGTCAGGCCGCAGTACACAC +
Preference number: 4 (lower is better)
Translates to: FVKILEPLSPEYSSGHHCWARSL*SGRSTH
Trigger: GTGTGTACTGCGGCCTGACCACAGGCTTCGTGCCCA...GCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTTAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR CCA 90 bp GTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATAGGTCCAGCCCTACAGATTCTTTAGCACACTCTTaGCCCGGTTCTCCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: VVHSSISVSLGHRSSPTDSLAHS*PGSPRC
Trigger: GCAACGAGGAGAACCGGGCCAAGAGTGTGCTAAAGA...ATCTGTAGGGCTGGACCTATGTCCTAAGGACACACTAATCGAACTATGAACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000674765.1
CDS-3UTR CCA 90 bp ATGAAATTCAGACTAGTGGCAGAAAACTGGACTTGTGATGAAGGAGCAGATGAAAACGGCAATGGCAGCTaGACGTGGACCCTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: MKFRLVAENWTCDEGADENGNGS*TWTLAE
Trigger: TTCAGCCAGGGTCCACGTCCAGCTGCCATTGCCGTT...TTCATCTGCTCCTTCATCACAAGTCCAGTTTTCTGCCACTAGTCTGAATTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR CCA 90 bp GGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGAATGTATATATTCTCTaGGTAACAGGGATCAAACAG +
Preference number: 4 (lower is better)
Translates to: GLVSTLRHGTIQGEAWDVNVYIL*VTGIKQ
Trigger: CTGTTTGATCCCTGTTACCCAGAGAATATATACATT...CACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR CCA 90 bp ACTTTATTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTCACAATGCAACACTGTaGTTAGAGACTTTATATAGC +
Preference number: 4 (lower is better)
Translates to: TLLDTAWMPGPGRPHTLPHNATL*LETLYS
Trigger: GCTATATAAAGTCTCTAACCACAGTGTTGCATTGTG...AGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAATAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR CCA 90 bp TTTGTTAAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTCTCATCCAGCTGCCTaGGCGATGAGGATGCCGACG +
Preference number: 4 (lower is better)
Translates to: FVKILEPLSPEYSSGHHCSHPAA*AMRMPT
Trigger: CGTCGGCATCCTCATCGCCCAGGCAGCTGGATGAGA...GCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTTAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475162.3
CDS-3UTR TCA 90 bp ATATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCTGTTTCGAGAAGCCCATaGGCACGGCGGACACGAAGG +
Preference number: 4 (lower is better)
Translates to: IYKYLASIHNRAGVSMSSVSRSP*ARRTRR
Trigger: CCTTCGTGTCCGCCGTGCTCATGGGCTTCTCGAAAC...AGAAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp AGTAACAGGAGTGAGGTGGTGTATTTACAAGTTGGCTTGTCCAGATATACTATACTAGCGCGATGGTCATaGGTATGGCACAACCCGCCA +
Preference number: 4 (lower is better)
Translates to: SNRSEVVYLQVGLSRYTILARWS*VWHNPP
Trigger: TGGCGGGTTGTGCCATACTCATGACCATCGCGCTAG...TATAGTATATCTGGACAAGCCAACTTGTAAATACACCACCTCACTCCTGTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR TCA 90 bp GAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGGTGAAGGAGGAGGATaGGCTGTCTTTAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: EPLSPEYSSGHHCWLEKGGEGGG*AVFRDE
Trigger: TTCATCTCTAAAGACAGCTCATCCTCCTCCTTCACC...TCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR TCA 90 bp CTTGCTTTTGTTAAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATTTTAGCACTGGGCGATaGGGATGCCGACGACGATGC +
Preference number: 4 (lower is better)
Translates to: LAFVKILEPLSPEYSSGHFSTGR*GCRRRC
Trigger: GCATCGTCGTCGGCATCCTCATCGCCCAGTGCTAAA...ATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTTAACAAAAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630287.2
CDS-3UTR GCA 90 bp ATATATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTGCGTGGTGGGCAGGATaGTCTCCCCATAGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: IYINILHLYTTGQESPCLAWWAG*SPHSGG
Trigger: TCCACCGCTATGGGGAGAGCATCCTGCCCACCACGC...AAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp ATATATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCAGGGAGCCAAGCACTaGTCCTCCCACGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: IYINILHLYTTGQESPCLQGAKH*SSHGQH
Trigger: ATGCTGGCCGTGGGAGGAGCAGTGCTTGGCTCCCTG...AAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp GAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGACTCATGGTAATAGTGTaGCCCTCAGTGCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: EPLSPEYSSGHHCWLEKGLMVIV*PSVQRR
Trigger: TCTCCTTTGCACTGAGGGCCACACTATTACCATGAG...TCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp TTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCATCCAGTGCTCCCAACTaGTCTCAGGTAAAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: LSPEYSSGHHCWLEKGAPSSAPN*SQVKKD
Trigger: ATCTTTCTTTACCTGAGACCAGTTGGGAGCACTGGA...TGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp CTCCATGTCTTCTTGAGCAGTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGTGTATTTACAAGTTaGCTTGTCCAGATATACTAT +
Preference number: 4 (lower is better)
Translates to: LHVFLSSEFAGSHRPSSHGVFTS*LVQIYY
Trigger: ATAGTATATCTGGACAAGCCAACTTGTAAATACACC...ATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACATGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp AAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGAGCTTGACAGCTCATTaGGCCCATACAAAGAACGTG +
Preference number: 4 (lower is better)
Translates to: KILEPLSPEYSSGHHCWLSLTAH*AHTKNV
Trigger: CACGTTCTTTGTATGGGCCCAATGAGCTGTCAAGCT...CAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR CAA 72 bp CCAAATGAAATGAACACAGGGCAGCTTGACAGCTCATaGGGCCCATACAAAGAACGTGGTTCATTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: PNEMNTGQLDSS*GPYKERGSFCV
Trigger: CACACAAAATGAACCACGTTCTTTGTATGGGCCCAATGAGCTGTCAAGCTGCCCTGTGTTCATTTCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR GCA 90 bp TCCTGGGATAGAAGCTTTGTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATTCTTCCTTCATCTCCTaGAGGTCATGGGTCACGTCA +
Preference number: 4 (lower is better)
Translates to: SWDRSFVVHSSISVSLGHSSFIS*RSWVTS
Trigger: TGACGTGACCCATGACCTGCAGGAGATGAAGGAAGA...ATGTCCTAAGGACACACTAATCGAACTATGAACTACAAAGCTTCTATCCCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp TTTGTTAAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCCCCCAACAGAAAAGATaGCCACTGAGAGGGACCAGA +
Preference number: 4 (lower is better)
Translates to: FVKILEPLSPEYSSGHHCPQQKR*PLRGTR
Trigger: TCTGGTCCCTCTCAGTGGCCATCTTTTCTGTTGGGG...GCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTTAACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR CCA 90 bp TGGGATAGAAGCTTTGTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATAGGCCACAAAGCCAAAGATaGCCACGATGCTCAGATAGG +
Preference number: 4 (lower is better)
Translates to: WDRSFVVHSSISVSLGHRPQSQR*PRCSDR
Trigger: CCTATCTGAGCATCGTGGCCATCTTTGGCTTTGTGG...CCTATGTCCTAAGGACACACTAATCGAACTATGAACTACAAAGCTTCTATCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp ATATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCTATTCAGGGTGAAGCCTaGGATGTGGGCACAGGAGAC +
Preference number: 4 (lower is better)
Translates to: IYKYLASIHNRAGVSMSSIQGEA*DVGTGD
Trigger: GTCTCCTGTGCCCACATCCCAGGCTTCACCCTGAAT...AGAAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp GTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATAGGTCCAGCCCTACAGATTCCAGTGCTCCCAACTaGTCTCAGGTAAAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: VVHSSISVSLGHRSSPTDSSAPN*SQVKKD
Trigger: ATCTTTCTTTACCTGAGACCAGTTGGGAGCACTGGA...ATCTGTAGGGCTGGACCTATGTCCTAAGGACACACTAATCGAACTATGAACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp ATATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCTAATAGAAGACAGCGTTaGTGCCAGACAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: IYKYLASIHNRAGVSMSSNRRQR*CQTAAG
Trigger: CCCAGCAGCTGTCTGGCATCAACGCTGTCTTCTATT...AGAAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp TATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCTTTGTCTTCTTGAGCAGTaGGTTTGCAGGCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: YINILHLYTTGQESPCLLCLLEQ*VCRLPQ
Trigger: CTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACA...AAGAAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp CTTGCTTTTGTTAAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATGTCTCCATGTCTTCTTaGGCAGTGAGTTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LAFVKILEPLSPEYSSGHVSMSS*AVSLQA
Trigger: AGCCTGCAAACTCACTGCTCAAGAAGACATGGAGAC...ATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTTAACAAAAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR GCA 90 bp AGTAACAGGAGTGAGGTGGTGTATTTACAAGTTGGCTTGTCCAGATATACTATACAAAGATGGCCACGATaGTCAGATAGGACATCCAGG +
Preference number: 4 (lower is better)
Translates to: SNRSEVVYLQVGLSRYTIQRWPR*SDRTSR
Trigger: CCTGGATGTCCTATCTGAGCATCGTGGCCATCTTTG...TATAGTATATCTGGACAAGCCAACTTGTAAATACACCACCTCACTCCTGTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp ATATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCTCCCCAACAGAAAAGATaGCCACTGAGAGGGACCAGA +
Preference number: 4 (lower is better)
Translates to: IYKYLASIHNRAGVSMSSPQQKR*PLRGTR
Trigger: TCTGGTCCCTCTCAGTGGCCATCTTTTCTGTTGGGG...AGAAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp TATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCTTCTTCACCCACATACATaGGCACGAAGCCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: YINILHLYTTGQESPCLLLHPHT*ARSLWS
Trigger: TGACCACAGGCTTCGTGCCCATGTATGTGGGTGAAG...AAGAAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp AATATATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTGTTCATCATCAGCATTaGATTCCGCCGGCCAAAGCG +
Preference number: 4 (lower is better)
Translates to: NIYKYLASIHNRAGVSMSVHHQH*IPPAKA
Trigger: CGCTTTGGCCGGCGGAATTCAATGCTGATGATGAAC...AGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR TCA 90 bp ATATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCTGTCTCCATGTCTTCTTaGGCAGTGAGTTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: IYKYLASIHNRAGVSMSSVSMSS*AVSLQA
Trigger: AGCCTGCAAACTCACTGCTCAAGAAGACATGGAGAC...AGAAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR GCA 90 bp CTTGCTTTTGTTAAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATAGAAGGAGCCAATCATaGCCCCAACAGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: LAFVKILEPLSPEYSSGHRRSQS*PQQKRW
Trigger: CCATCTTTTCTGTTGGGGGCATGATTGGCTCCTTCT...ATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTTAACAAAAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR GCA 90 bp ATATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCTTCTTCTGGACATCATTaGTGGCTGGAGAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: IYKYLASIHNRAGVSMSSSSGHH*WLEKGA
Trigger: GGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGA...AGAAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp GTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATAGGTCCAGCCCTACAGATATTAATTTGAGTGGTTaGGTAGGAAGAGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: VVHSSISVSLGHRSSPTDINLSG*VGRDGK
Trigger: CTTCCCATCTCTTCCTACCCAACCACTCAAATTAAT...ATCTGTAGGGCTGGACCTATGTCCTAAGGACACACTAATCGAACTATGAACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp ATGAAATTCAGACTAGTGGCAGAAAACTGGACTTGTGATGAAGGAGCAGATGAATCCAGTGCTCCCAACTaGTCTCAGGTAAAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: MKFRLVAENWTCDEGADESSAPN*SQVKKD
Trigger: ATCTTTCTTTACCTGAGACCAGTTGGGAGCACTGGA...TTCATCTGCTCCTTCATCACAAGTCCAGTTTTCTGCCACTAGTCTGAATTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
3UTR CAA 72 bp GCTTATTCACTGTGCGACTTCAGGCACATAACCTCTTaGAGCCTGTCCAATAAAGGTACAGTATTTACTTCA +
Preference number: 4 (lower is better)
Translates to: AYSLCDFRHITS*SLSNKGTVFTS
Trigger: TGAAGTAAATACTGTACCTTTATTGGACAGGCTCAAAGAGGTTATGTGCCTGAAGTCGCACAGTGAATAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR GCA 90 bp AATATATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCTTCCTTCATCTCCTaGAGGTCATGGGTCACGTCA +
Preference number: 4 (lower is better)
Translates to: NIYKYLASIHNRAGVSMSSSFIS*RSWVTS
Trigger: TGACGTGACCCATGACCTGCAGGAGATGAAGGAAGA...AGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CCA 90 bp CTTGCTTTTGTTAAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCTAGTGGCAGAAAACTaGACTTGTGATGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LAFVKILEPLSPEYSSGHLVAEN*TCDEGA
Trigger: TGCTCCTTCATCACAAGTCCAGTTTTCTGCCACTAG...ATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTTAACAAAAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR CCA 90 bp TCCTGGGATAGAAGCTTTGTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATGGTGTATTTACAAGTTaGCTTGTCCAGATATACTAT +
Preference number: 4 (lower is better)
Translates to: SWDRSFVVHSSISVSLGHGVFTS*LVQIYY
Trigger: ATAGTATATCTGGACAAGCCAACTTGTAAATACACC...ATGTCCTAAGGACACACTAATCGAACTATGAACTACAAAGCTTCTATCCCAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CCA 90 bp ATATATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCCCATACAAAGAACGTaGTTCATTTTGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: IYINILHLYTTGQESPCLPIQRT*FILCVW
Trigger: CCACACACACAAAATGAACCACGTTCTTTGTATGGG...AAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS CCA 90 bp ATGGCAGCGCTGCGCTGGTGGCTCTGGCTGCGCCGGGTACGCGGGTaGCGACGGGCGTGCGAGCGGCGCTCTCCCGCTCAGGCTCGTGCT +
Preference number: 5 (lower is better)
Translates to: MAALRWWLWLRRVRG*RRACERRSPAQARA
Trigger: AGCACGAGCCTGAGCGGGAGAGCGCCGCTCGCACGCCCGTCGCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCAT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000372500.4
ENST00000415851.6
ENST00000426263.10
ENST00000460369.3
ENST00000625233.2
ENST00000630287.2
ENST00000630821.1
ENST00000674765.1
ENST00000676097.1
CDS CCA 90 bp ATCACCTTGCTGCTGGGCTCCATGGCAGCGCTGCGCTGGTGGCTCTaGCTGCGCCGGGTACGCGGGTGGCGACGGGCGTGCGAGCGGCGC +
Preference number: 5 (lower is better)
Translates to: ITLLLGSMAALRWWL*LRRVRGWRRACERR
Trigger: GCGCCGCTCGCACGCCCGTCGCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCATGGAGCCCAGCAGCAAGGTGAT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372500.4
CDS CCA 90 bp AGCTTCTTGCTGCTGGGCTCCATGGCAGCGCTGCGCTGGTGGCTCTaGCTGCGCCGGGTACGCGGGTGGCGACGGGCGTGCGAGCGGCGC +
Preference number: 5 (lower is better)
Translates to: SFLLLGSMAALRWWL*LRRVRGWRRACERR
Trigger: GCGCCGCTCGCACGCCCGTCGCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCATGGAGCCCAGCAGCAAGAAGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415851.6
ENST00000426263.10
ENST00000625233.2
ENST00000630287.2
ENST00000630821.1
ENST00000674765.1
CDS CCA 90 bp CTCTACTTGCTGCTGGGCTCCATGGCAGCGCTGCGCTGGTGGCTCTaGCTGCGCCGGGTACGCGGGTGGCGACGGGCGTGCGAGCGGCGC +
Preference number: 5 (lower is better)
Translates to: LYLLLGSMAALRWWL*LRRVRGWRRACERR
Trigger: GCGCCGCTCGCACGCCCGTCGCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCATGGAGCCCAGCAGCAAGTAGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676097.1
CDS CCA 90 bp CGACCCGTCAGCTTCTTGCTGCTGGGCTCCATGGCAGCGCTGCGCTaGTGGCTCTGGCTGCGCCGGGTACGCGGGTGGCGACGGGCGTGC +
Preference number: 5 (lower is better)
Translates to: RPVSFLLLGSMAALR*WLWLRRVRGWRRAC
Trigger: GCACGCCCGTCGCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCATGGAGCCCAGCAGCAAGAAGCTGACGGGTCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415851.6
ENST00000426263.10
ENST00000625233.2
ENST00000630287.2
ENST00000630821.1
ENST00000674765.1
CDS CCA 90 bp AACTCCTCGATCACCTTGCTGCTGGGCTCCATGGCAGCGCTGCGCTaGTGGCTCTGGCTGCGCCGGGTACGCGGGTGGCGACGGGCGTGC +
Preference number: 5 (lower is better)
Translates to: NSSITLLLGSMAALR*WLWLRRVRGWRRAC
Trigger: GCACGCCCGTCGCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCATGGAGCCCAGCAGCAAGGTGATCGAGGAGTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372500.4
CDS TCA 90 bp CCCGCTCAGGCTCGTGCTCCGGTCCGGGGACTCCCACTGCGACTCTaGCTCCGACCCCCGTCGTTTGGTCTCCTGCTCCCTGGCGTGCTC +
Preference number: 5 (lower is better)
Translates to: PAQARAPVRGLPLRL*LRPPSFGLLLPGVL
Trigger: GAGCACGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGAGTCAGAGTCGCAGTGGGAGTCCCCGGACCGGAGCACGAGCCTGAGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000372500.4
ENST00000415851.6
ENST00000426263.10
ENST00000460369.3
ENST00000625233.2
ENST00000630287.2
ENST00000630821.1
ENST00000674765.1
ENST00000676097.1
CDS GCA 90 bp GGCGCTCTCCCGCTCAGGCTCGTGCTCCGGTCCGGGGACTCCCACTaGGACTCTGACTCCGACCCCCGTCGTTTGGTCTCCTGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: GALPLRLVLRSGDSH*DSDSDPRRLVSCSL
Trigger: CAGGGAGCAGGAGACCAAACGACGGGGGTCGGAGTCAGAGTCGCAGTGGGAGTCCCCGGACCGGAGCACGAGCCTGAGCGGGAGAGCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000372500.4
ENST00000415851.6
ENST00000426263.10
ENST00000460369.3
ENST00000625233.2
ENST00000630287.2
ENST00000630821.1
ENST00000674765.1
ENST00000676097.1
CDS GCA 90 bp TGTAGAACTCCTCGATCACCTTGCTGCTGGGCTCCATGGCAGCGCTaGGCTGGTGGCTCTGGCTGCGCCGGGTACGCGGGTGGCGACGGG +
Preference number: 5 (lower is better)
Translates to: CRTPRSPCCWAPWQR*AGGSGCAGYAGGDG
Trigger: CCCGTCGCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCATGGAGCCCAGCAGCAAGGTGATCGAGGAGTTCTACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372500.4
CDS GCA 90 bp GACTCCCACTGCGACTCTGACTCCGACCCCCGTCGTTTGGTCTCCTaGTCCCTGGCGTGCTCACTCGGGGACCCGCGACTAGCGACCGGC +
Preference number: 5 (lower is better)
Translates to: DSHCDSDSDPRRLVS*SLACSLGDPRLATG
Trigger: GCCGGTCGCTAGTCGCGGGTCCCCGAGTGAGCACGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGAGTCAGAGTCGCAGTGGGAGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000415851.6
ENST00000426263.10
ENST00000460369.3
ENST00000625233.2
ENST00000630287.2
ENST00000630821.1
ENST00000674765.1
ENST00000676097.1
CDS GCA 90 bp GACTCTGACTCCGACCCCCGTCGTTTGGTCTCCTGCTCCCTGGCGTaGTCACTCGGGGACCCGCGACTAGCGACCGGCACGCTCGCTGTT +
Preference number: 5 (lower is better)
Translates to: DSDSDPRRLVSCSLA*SLGDPRLATGTLAV
Trigger: AACAGCGAGCGTGCCGGTCGCTAGTCGCGGGTCCCCGAGTGAGCACGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGAGTCAGAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000415851.6
ENST00000426263.10
ENST00000460369.3
ENST00000625233.2
ENST00000630821.1
ENST00000674765.1
ENST00000676097.1
CDS GCA 90 bp ACCCGCCATGCCAGCGAGGCCTATGAGGTGCAGGGTCCGCCGGCCTaGTCGCTCCACCACAAACAGCTGTGGGCAGAGACAGTGTCAGTG +
Preference number: 5 (lower is better)
Translates to: TRHASEAYEVQGPPA*SLHHKQLWAETVSV
Trigger: CACTGACACTGTCTCTGCCCACAGCTGTTTGTGGTGGAGCGAGCAGGCCGGCGGACCCTGCACCTCATAGGCCTCGCTGGCATGGCGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CCA 90 bp GAGGTGCAGGGTCCGCCGGCCTGCTCGCTCCACCACAAACAGCTGTaGGCAGAGACAGTGTCAGTGCCACCCCTGCCTAGTGCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: EVQGPPACSLHHKQL*AETVSVPPLPSALL
Trigger: CAGAAGGGCACTAGGCAGGGGTGGCACTGACACTGTCTCTGCCCACAGCTGTTTGTGGTGGAGCGAGCAGGCCGGCGGACCCTGCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS-3UTR CAA 90 bp TGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTCCGACCCCCGTCGTTaGGTCTCCTGCTCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: WTSLLAGERSPRPGSADISDPRR*VSCSLA
Trigger: CGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGA...GATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS GCA 90 bp CAATCTTCCATAAATAAACCTTGCTGCTGGGCTCCATGGCAGCGCTaGGCTGGTGGCTCTGGCTGCGCCGGGTACGCGGGTGGCGACGGG +
Preference number: 5 (lower is better)
Translates to: QSSINKPCCWAPWQR*AGGSGCAGYAGGDG
Trigger: CCCGTCGCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCATGGAGCCCAGCAGCAAGGTTTATTTATGGAAGATTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS GCA 90 bp GTCATGAGTATGGCACAACCCGCCATGCCAGCGAGGCCTATGAGGTaGAGGGTCCGCCGGCCTGCTCGCTCCACCACAAACAGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: VMSMAQPAMPARPMR*RVRRPARSTTNSCG
Trigger: CCCACAGCTGTTTGTGGTGGAGCGAGCAGGCCGGCGGACCCTGCACCTCATAGGCCTCGCTGGCATGGCGGGTTGTGCCATACTCATGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS-3UTR CAA 90 bp TTGGACACAGCTTGGATGCCAGGACCTGGTAGGCCCCACACACTGCCTGCTAGGTCCGACCCCCGTCGTTaGGTCTCCTGCTCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: LDTAWMPGPGRPHTLPARSDPRR*VSCSLA
Trigger: CGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGA...CCTAGCAGGCAGTGTGTGGGGCCTACCAGGTCCTGGCATCCAAGCTGTGTCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS-3UTR CAA 90 bp TTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTGGGGCGACTCACACTaGGGAATCAGCCCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: LLAGERSPRPGSADICQVWGDSH*GISPQG
Trigger: CCCCTGGGGGCTGATTCCCAAGTGTGAGTCGCCCCA...AACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CAA 90 bp TTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTGGCCACAGGTCCTTGTaGCCCATGATGGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LLAGERSPRPGSADICQVGHRSL*PMMESR
Trigger: CCTGGACTCCATCATGGGCAACAAGGACCTGTGGCC...AACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR CAA 90 bp TGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCAGCTCCTCGGGTGTCTaGTCACTTTGGCTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: WTSLLAGERSPRPGSADISSSGV*SLWLAP
Trigger: GGGAGCCAGCCAAAGTGACAAGACACCCGAGGAGCT...GATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS GCA 90 bp GTGTGCATGTGGACGGTGCTAAGAGGCCCCATGGTCCCCTGTCTGTaGCTGCAGCACAGTCCGCCTGTGGCAGGATGCAGAACATTCCTG +
Preference number: 5 (lower is better)
Translates to: VCMWTVLRGPMVPCL*LQHSPPVAGCRTFL
Trigger: CAGGAATGTTCTGCATCCTGCCACAGGCGGACTGTGCTGCAGGCACAGACAGGGGACCATGGGGCCTCTTAGCACCGTCCACATGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS-3UTR CAA 90 bp TCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCTCCGACCCCCGTCGTTaGGTCTCCTGCTCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: SHGNSVALSAKETRTRQPSDPRR*VSCSLA
Trigger: CGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGA...GGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CAA 90 bp CAAGTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTTCCGACCCCCGTCGTTaGGTCTCCTGCTCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: QVSRQGLVSTLRHGTIQGSDPRR*VSCSLA
Trigger: CGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGA...ACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CAA 90 bp CTGACCCCTAGAGTGGGGAGATCCAGGCCAGCAGAACGGGTGGCCATAGCCACCACAGTGAAGGCCGTGTaGACGATACCGGAGCCAATG +
Preference number: 5 (lower is better)
Translates to: LTPRVGRSRPAERVAIATTVKAV*TIPEPM
Trigger: CATTGGCTCCGGTATCGTCAACACGGCCTTCACTGT...GGTGGCTATGGCCACCCGTTCTGCTGGCCTGGATCTCCCCACTCTAGGGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS TCA 90 bp GACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTaGCATCTGTCAGGTTTGGAAGTCTCATCCAGCTGCCTGGGCGAT +
Preference number: 5 (lower is better)
Translates to: DIIAGWRKEPQARLG*HLSGLEVSSSCLGD
Trigger: ATCGCCCAGGCAGCTGGATGAGACTTCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475162.3
CDS TCA 90 bp TGTGGGCAGAGACAGTGTCAGTGCCACCCCTGCCTAGTGCCCTTCTaGACCCACCCACCCAGAGGCCTTGCCTCAAGAGCTGAGAAAGTC +
Preference number: 5 (lower is better)
Translates to: CGQRQCQCHPCLVPF*THPPRGLASRAEKV
Trigger: GACTTTCTCAGCTCTTGAGGCAAGGCCTCTGGGTGGGTGGGTTCAGAAGGGCACTAGGCAGGGGTGGCACTGACACTGTCTCTGCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS GCA 90 bp TGGCTGCAAGTGTTGAGTCCACCCGCTGGGAGTGGTAATGTGGTGTaGATGTGGACGGTGCTAAGAGGCCCCATGGTCCCCTGTCTGTGC +
Preference number: 5 (lower is better)
Translates to: WLQVLSPPAGSGNVV*MWTVLRGPMVPCLC
Trigger: GCACAGACAGGGGACCATGGGGCCTCTTAGCACCGTCCACATGCACACCACATTACCACTCCCAGCGGGTGGACTCAACACTTGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CCA 90 bp TCTGGACCTGTGTACCATAGTTGTCCTCTGCAAGGCTGTGGGGGCTaGGCGGAAGAGAAACTCTGCCCTGCTGGGCACAGATCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: SGPVYHSCPLQGCGG*AEEKLCPAGHRSES
Trigger: GCTCTCGGATCTGTGCCCAGCAGGGCAGAGTTTCTCTTCCGCCCAGCCCCCACAGCCTTGCAGAGGACAACTATGGTACACAGGTCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625233.2
CDS CCA 90 bp CAAGTGTTGAGTCCACCCGCTGGGAGTGGTAATGTGGTGTGCATGTaGACGGTGCTAAGAGGCCCCATGGTCCCCTGTCTGTGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: QVLSPPAGSGNVVCM*TVLRGPMVPCLCLQ
Trigger: CTGCAGGCACAGACAGGGGACCATGGGGCCTCTTAGCACCGTCCACATGCACACCACATTACCACTCCCAGCGGGTGGACTCAACACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS-3UTR CAA 90 bp TTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTTTCTCCTCGTTGCGGTaGATGAGCAGGAAGCGGGGA +
Preference number: 5 (lower is better)
Translates to: FFWTSLLAGERSPRPGSAFSSLR*MSRKRG
Trigger: TCCCCGCTTCCTGCTCATCAACCGCAACGAGGAGAA...AGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS GCA 90 bp GCCATGGTGCTGTGTTCTCTGGACCTGTGTACCATAGTTGTCCTCTaGAAGGCTGTGGGGGCTGGGCGGAAGAGAAACTCTGCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: AMVLCSLDLCTIVVL*KAVGAGRKRNSALL
Trigger: CAGCAGGGCAGAGTTTCTCTTCCGCCCAGCCCCCACAGCCTTGCAGAGGACAACTATGGTACACAGGTCCAGAGAACACAGCACCATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625233.2
CDS CCA 90 bp GGTAGGCCCCACACACTGCCTGCTAGGCCCTGGACTGTCCAGGGCTaGAGTGAGGGTAGTTCATGCAAGGAAGTGTCAGACCACATGGTA +
Preference number: 5 (lower is better)
Translates to: GRPHTLPARPWTVQG*SEGSSCKEVSDHMV
Trigger: TACCATGTGGTCTGACACTTCCTTGCATGAACTACCCTCACTCCAGCCCTGGACAGTCCAGGGCCTAGCAGGCAGTGTGTGGGGCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460369.3
ENST00000629908.1
CDS CCA 90 bp TCCCGCATCATCTGCCGACTCTCTTCCTTCATCTCCTGCAGGTCATaGGTCACGTCAGCTGTCCCGCGCAGCTTCTTTAGCACTGGGCGA +
Preference number: 5 (lower is better)
Translates to: SRIICRLSSFISCRS*VTSAVPRSFFSTGR
Trigger: TCGCCCAGTGCTAAAGAAGCTGCGCGGGACAGCTGACGTGACCCATGACCTGCAGGAGATGAAGGAAGAGAGTCGGCAGATGATGCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630287.2
CDS-3UTR CAA 90 bp TGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTAGCATCTCAAAGGACTaGCCCAGTTTCGAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: CWLEKGAPGPARLTSVRFSISKD*PSFEKP
Trigger: GGGCTTCTCGAAACTGGGCAAGTCCTTTGAGATGCT...AAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR CAA 90 bp GGTCCAGCCCTACAGATTAGCTGGGTGAAGAAGGCAAGTGTCTCGACAGGGCTTCGACCCGTCAGCTTCTaGCTGCTGGGCTCCATGGCA +
Preference number: 5 (lower is better)
Translates to: GPALQISWVKKASVSTGLRPVSF*LLGSMA
Trigger: TGCCATGGAGCCCAGCAGCAAGAAGCTGACGGGTCG...AAGCCCTGTCGAGACACTTGCCTTCTTCACCCAGCTAATCTGTAGGGCTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CAA 90 bp TCCAGGCCAGCAGAACGGGTGGCCATAGCCACCTCCTGGGATAGAAGCTTTGTAAGGGGCCACAGGTCCTaGTTGCCCATGATGGAGTCC +
Preference number: 5 (lower is better)
Translates to: SRPAERVAIATSWDRSFVRGHRS*LPMMES
Trigger: GGACTCCATCATGGGCAACAAGGACCTGTGGCCCCT...TACAAAGCTTCTATCCCAGGAGGTGGCTATGGCCACCCGTTCTGCTGGCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000674765.1
CDS-3UTR CAA 90 bp GGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGGATGTGAGCTCCTCGGGTGTCTaGTCACTTTGGCTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: GLVSTLRHGTIQGEAWDVSSSGV*SLWLAP
Trigger: GGGAGCCAGCCAAAGTGACAAGACACCCGAGGAGCT...CACATCCCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CAA 90 bp ACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTTCGAAGTCTAAGCCGTaGCAGTGGTTGCAACCCCAC +
Preference number: 5 (lower is better)
Translates to: TSLLAGERSPRPGSADICSKSKP*QWLQPH
Trigger: GTGGGGTTGCAACCACTGCAACGGCTTAGACTTCGA...ACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR CAA 90 bp TTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACAGAACGTGGTTCATTTaGTGTGTGTGGGGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: FWTSLLAGERSPRPGSADRTWFI*CVWGGV
Trigger: CACCCCTCCCCACACACACAAAATGAACCACGTTCT...GTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS TCA 90 bp AGTGCCCTTCTGAACCCACCCACCCAGAGGCCTTGCCTCAAGAGCTaGGAAAGTCACAGGGCACTGCAAAGACCAGTGGGGAAGATGGCA +
Preference number: 5 (lower is better)
Translates to: SALLNPPTQRPCLKS*ESHRALQRPVGKMA
Trigger: TGCCATCTTCCCCACTGGTCTTTGCAGTGCCCTGTGACTTTCTCAGCTCTTGAGGCAAGGCCTCTGGGTGGGTGGGTTCAGAAGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS TCA 90 bp GAGAGGGCCAGGGCCTGGCTCTGCCACAGATTCACTGCATGTTCTTaGGCCAAGTCCCTCTATTTTTGTGGGCCTCACTTTCCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: ERARAWLCHRFTACS*AKSLYFCGPHFPQA
Trigger: CGCCTGGGGAAAGTGAGGCCCACAAAAATAGAGGGACTTGGCTCAAGAACATGCAGTGAATCTGTGGCAGAGCCAGGCCCTGGCCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676254.1
CDS GCA 90 bp AGACAACTTCAGGAGCCAGAAAGTCAGACCCACAGCCAGGGAGAATaGAGCCACCAAAAGGCCTGCCAGCCTGGGGCTGAGACAGGCATT +
Preference number: 5 (lower is better)
Translates to: RQLQEPESQTHSQGE*SHQKACQPGAETGI
Trigger: AATGCCTGTCTCAGCCCCAGGCTGGCAGGCCTTTTGGTGGCTGCATTCTCCCTGGCTGTGGGTCTGACTTTCTGGCTCCTGAAGTTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS GCA 90 bp GAGCGGAACAGCTCCAGGATGGTGACCTTCTTCTCCCGCATCATCTaGCGACTCTCTTCCTTCATCTCCACTCTTGGCCCGGTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: ERNSSRMVTFFSRII*RLSSFISTLGPVLL
Trigger: GAGGAGAACCGGGCCAAGAGTGGAGATGAAGGAAGAGAGTCGGCAGATGATGCGGGAGAAGAAGGTCACCATCCTGGAGCTGTTCCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669445.1
CDS CCA 90 bp AGACCTGCCAGACAAGAGAAACTGTTGGGGCCTACCTGGACATTGTaGCCCTTCCCTGCCTCTGTAGCAGTGGATGTGGGACCCAGGATG +
Preference number: 5 (lower is better)
Translates to: RPARQEKLLGPTWTL*PFPASVAVDVGPRM
Trigger: CATCCTGGGTCCCACATCCACTGCTACAGAGGCAGGGAAGGGCCACAATGTCCAGGTAGGCCCCAACAGTTTCTCTTGTCTGGCAGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674545.1
ENST00000675112.1
CDS-3UTR CAA 90 bp GTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGAAGGCCACAGGTCCTTGTaGCCCATGATGGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: VSRQGLVSTLRHGTIQGEGHRSL*PMMESR
Trigger: CCTGGACTCCATCATGGGCAACAAGGACCTGTGGCC...TTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000674765.1
CDS-3UTR CAA 90 bp CATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGTCTCCATGTCTTCTaGAGCAGTGAGTTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: HHCWLEKGAPGPARLTSVSLHVF*SSEFAG
Trigger: GCCTGCAAACTCACTGCTCAAGAAGACATGGAGACT...GACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CAA 90 bp TGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTGGACAGCTTGACAGCTCATaGGGCCCATACAAAGAACGT +
Preference number: 5 (lower is better)
Translates to: WLEKGAPGPARLTSVRFGQLDSS*GPYKER
Trigger: ACGTTCTTTGTATGGGCCCAATGAGCTGTCAAGCTG...TCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS GCA 90 bp ACCTTCTTCTCCCGCATCATCTGCCGACTCTCTTCCTTCATCTCCTaGAGGTCATGGGTCACGTCAGCTGTCCCGCGCAGCTTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: TFFSRIICRLSSFIS*RSWVTSAVPRSFFS
Trigger: GCTAAAGAAGCTGCGCGGGACAGCTGACGTGACCCATGACCTGCAGGAGATGAAGGAAGAGAGTCGGCAGATGATGCGGGAGAAGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
ENST00000675112.1
ENST00000676254.1
CDS GCA 90 bp CGGCAGAGGCGTATCTGTTGTTTCAAGTTTGGGACTTGTTCACCATaGACACTTGACCAGAGGGCTTGGCTGGGGCACAGGAAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: RQRRICCFKFGTCSP*TLDQRAWLGHRKGG
Trigger: CCCACCCTTCCTGTGCCCCAGCCAAGCCCTCTGGTCAAGTGTGCATGGTGAACAAGTCCCAAACTTGAAACAACAGATACGCCTCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675112.1
CDS CCA 90 bp TCCCGCATCATCTGCCGACTCTCTTCCTTCATCTCCTGCAGGTCATaGGTCACGTCAGCTGTCCCGCGCAGCTTCTTTAGCACACTCTTG +
Preference number: 5 (lower is better)
Translates to: SRIICRLSSFISCRS*VTSAVPRSFFSTLL
Trigger: CAAGAGTGTGCTAAAGAAGCTGCGCGGGACAGCTGACGTGACCCATGACCTGCAGGAGATGAAGGAAGAGAGTCGGCAGATGATGCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426263.10
ENST00000674765.1
ENST00000675112.1
ENST00000676254.1
CDS-3UTR CAA 90 bp CCCTCTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGGCCCGGTTCTCCTCGTaGCGGTTGATGAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: PSSHGNSVALSAKETRTRARFSS*RLMSRK
Trigger: CTTCCTGCTCATCAACCGCAACGAGGAGAACCGGGC...CCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000674765.1
CDS-3UTR CAA 90 bp CTTCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCGCCCGGTTCTCCTCGTaGCGGTTGATGAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: LLMVIVWPSVQRRLEPGSARFSS*RLMSRK
Trigger: CTTCCTGCTCATCAACCGCAACGAGGAGAACCGGGC...GCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000674765.1
CDS TCA 90 bp CCAGGATCAGCATCTCAAAGGACTTGCCCAGTTTCGAGAAGCCCATaGGCACGGCGGACACGAAGGCCAGCAGGTTCATCATCAGCATTG +
Preference number: 5 (lower is better)
Translates to: PGSASQRTCPVSRSP*ARRTRRPAGSSSAL
Trigger: CAATGCTGATGATGAACCTGCTGGCCTTCGTGTCCGCCGTGCTCATGGGCTTCTCGAAACTGGGCAAGTCCTTTGAGATGCTGATCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000372500.4
ENST00000426263.10
ENST00000475162.3
ENST00000625233.2
ENST00000630287.2
ENST00000674765.1
ENST00000675112.1
ENST00000676254.1
CDS GCA 90 bp CCTGCTAGGCCCTGGACTGTCCAGGGCTGGAGTGAGGGTAGTTCATaGAAGGAAGTGTCAGACCACATGGTAACCCCACAATGCAACACT +
Preference number: 5 (lower is better)
Translates to: PARPWTVQGWSEGSS*KEVSDHMVTPQCNT
Trigger: AGTGTTGCATTGTGGGGTTACCATGTGGTCTGACACTTCCTTGCATGAACTACCCTCACTCCAGCCCTGGACAGTCCAGGGCCTAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460369.3
ENST00000629908.1
CDS GCA 90 bp GGATCCTCAGGGGAAACAGAAGCTACAGAGGCCAGAGCAGAGCTATaGGAGAAGGCAGGAAGCCTGGGGATGGTCCTGGATTTGTTGTGT +
Preference number: 5 (lower is better)
Translates to: GSSGETEATEARAEL*EKAGSLGMVLDLLC
Trigger: ACACAACAAATCCAGGACCATCCCCAGGCTTCCTGCCTTCTCGCATAGCTCTGCTCTGGCCTCTGTAGCTTCTGTTTCCCCTGAGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS-3UTR CAA 90 bp AGTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCACAGTGAAGGCCGTGTaGACGATACCGGAGCCAATG +
Preference number: 5 (lower is better)
Translates to: SEFAGSHRPSSHGNSVALTVKAV*TIPEPM
Trigger: CATTGGCTCCGGTATCGTCAACACGGCCTTCACTGT...GAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CAA 90 bp CGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGGGTGAAGCCTGGAGTCTCCATGTCTTCTaGAGCAGTGAGTTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: RQGLVSTLRHGTIQGEAWSLHVF*SSEFAG
Trigger: GCCTGCAAACTCACTGCTCAAGAAGACATGGAGACT...CCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CAA 90 bp ATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCAGACGCAACAGTCTTGCTTTaGCCAGCGAGGCCTATGAGG +
Preference number: 5 (lower is better)
Translates to: MVIVWPSVQRRLEPGSPDATVLL*PARPMR
Trigger: CCTCATAGGCCTCGCTGGCAAAAGCAAGACTGTTGC...GTCTGGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674765.1
CDS CCA 90 bp CAGAGGCCAGAGCAGAGCTATGCGAGAAGGCAGGAAGCCTGGGGATaGTCCTGGATTTGTTGTGTATCCAGCATTGGGCCTAAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: QRPEQSYARRQEAWG*SWICCVSSIGPKFP
Trigger: AGGAAACTTAGGCCCAATGCTGGATACACAACAAATCCAGGACCATCCCCAGGCTTCCTGCCTTCTCGCATAGCTCTGCTCTGGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS-3UTR CAA 90 bp TCTCATGGTAATAGTGTGGCCCTCAGTGCAAAGGAGACTAGAACCCGGCAGCCCTTCTTTAGCACACTCTaGGCCCGGTTCTCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: SHGNSVALSAKETRTRQPFFSTL*ARFSSL
Trigger: CAACGAGGAGAACCGGGCCAAGAGTGTGCTAAAGAA...GGGCTGCCGGGTTCTAGTCTCCTTTGCACTGAGGGCCACACTATTACCATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000674765.1
CDS-3UTR CAA 90 bp ACATCATTGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTGCAACAGTCTTGCTTTaGTTAAAATCCTGGAGCCGT +
Preference number: 5 (lower is better)
Translates to: TSLLAGERSPRPGSADICATVLL*LKSWSR
Trigger: ACGGCTCCAGGATTTTAACAAAAGCAAGACTGTTGC...ACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCAATGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS TCA 90 bp CCTGCCTCTGTAGCAGTGGATGTGGGACCCAGGATGAGTAAAGAATaGAGGGGACAAATACTCAGGCAGAAGGGACACTGCACTGCAGTG +
Preference number: 5 (lower is better)
Translates to: PASVAVDVGPRMSKE*RGQILRQKGHCTAV
Trigger: CACTGCAGTGCAGTGTCCCTTCTGCCTGAGTATTTGTCCCCTTCATTCTTTACTCATCCTGGGTCCCACATCCACTGCTACAGAGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674545.1
ENST00000675112.1
CDS CCA 90 bp AGTAATAGAAGACCTGCCAGACAAGAGAAACTGTTGGGGCCTACCTaGACATTGTGGCCCTTCCCTGCCTCTGTAGCAGTGGATGTGGGA +
Preference number: 5 (lower is better)
Translates to: SNRRPARQEKLLGPT*TLWPFPASVAVDVG
Trigger: TCCCACATCCACTGCTACAGAGGCAGGGAAGGGCCACAATGTCCAGGTAGGCCCCAACAGTTTCTCTTGTCTGGCAGGTCTTCTATTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674545.1
ENST00000675112.1
CDS CCA 90 bp GAGGCCAGGGTAGAAAATTTATGGGCTTTCCACTTGCTGCCTGTCTaGCCTTTCGGCAACCACCAAACTTTCCAAGCCCAGGTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: EARVENLWAFHLLPV*PFGNHQTFQAQVEL
Trigger: CAGCTCAACCTGGGCTTGGAAAGTTTGGTGGTTGCCGAAAGGCCAGACAGGCAGCAAGTGGAAAGCCCATAAATTTTCTACCCTGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS-3UTR CAA 90 bp TTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCACGACCCGTCAGCTTCTaGCTGCTGGGCTCCATGGCA +
Preference number: 5 (lower is better)
Translates to: LSPEYSSGHHCWLEKGAPRPVSF*LLGSMA
Trigger: TGCCATGGAGCCCAGCAGCAAGAAGCTGACGGGTCG...TGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CAA 90 bp ATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAGGGGCCACAGGTCCTaGTTGCCCATGATGGAGTCC +
Preference number: 5 (lower is better)
Translates to: ILEPLSPEYSSGHHCWLERGHRS*LPMMES
Trigger: GGACTCCATCATGGGCAACAAGGACCTGTGGCCCCT...CTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR CAA 90 bp CTCCATGTCTTCTTGAGCAGTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATTTCTTTAGCACACTCTaGGCCCGGTTCTCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: LHVFLSSEFAGSHRPSSHFFSTL*ARFSSL
Trigger: CAACGAGGAGAACCGGGCCAAGAGTGTGCTAAAGAA...ATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000674765.1
CDS-3UTR CAA 90 bp GTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGTAATAGTGTGGCCCTCAAAATTTGAGGTCCAGTaGGAGAAGCCTGCAACGGCA +
Preference number: 5 (lower is better)
Translates to: VSLQAPTGPLLMVIVWPSKFEVQ*EKPATA
Trigger: TGCCGTTGCAGGCTTCTCCAACTGGACCTCAAATTT...TGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CAA 90 bp AAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGTGGGGCGACTCACACTaGGGAATCAGCCCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: KILEPLSPEYSSGHHCWLWGDSH*GISPQG
Trigger: CCCCTGGGGGCTGATTCCCAAGTGTGAGTCGCCCCA...CAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS CCA 90 bp ATACTCAGGCAGAAGGGACACTGCACTGCAGTGACCTTACGGGCTTaGGGTCTAAAGGGAAACTTCTTCGGCAGAGGCGTATCTGTTGTT +
Preference number: 5 (lower is better)
Translates to: ILRQKGHCTAVTLRA*GLKGNFFGRGVSVV
Trigger: AACAACAGATACGCCTCTGCCGAAGAAGTTTCCCTTTAGACCCCAAGCCCGTAAGGTCACTGCAGTGCAGTGTCCCTTCTGCCTGAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675112.1
CDS-3UTR CAA 90 bp GTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATAGGTCCAGCCCTACAGATCGACCCGTCAGCTTCTaGCTGCTGGGCTCCATGGCA +
Preference number: 5 (lower is better)
Translates to: VVHSSISVSLGHRSSPTDRPVSF*LLGSMA
Trigger: TGCCATGGAGCCCAGCAGCAAGAAGCTGACGGGTCG...ATCTGTAGGGCTGGACCTATGTCCTAAGGACACACTAATCGAACTATGAACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CAA 90 bp TGTCAGGTTTGGAAGTCTCATCCAGCTGCCTGTGCTCCTGAGAGATCCTTAGGGAAATTTGAGGTCCAGTaGGAGAAGCCTGCAACGGCA +
Preference number: 5 (lower is better)
Translates to: CQVWKSHPAACAPERSLGKFEVQ*EKPATA
Trigger: TGCCGTTGCAGGCTTCTCCAACTGGACCTCAAATTT...CCCTAAGGATCTCTCAGGAGCACAGGCAGCTGGATGAGACTTCCAAACCTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CAA 90 bp AAGGCAAGTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAAGTCTCCATGTCTTCTaGAGCAGTGAGTTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: KASVSTGLSLHPQAWNHSSLHVF*SSEFAG
Trigger: GCCTGCAAACTCACTGCTCAAGAAGACATGGAGACT...TGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACACTTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CAA 90 bp TGCTGGCTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTTGGTGTATTTACAAGTaGGCTTGTCCAGATATACTA +
Preference number: 5 (lower is better)
Translates to: CWLEKGAPGPARLTSVRFWCIYK*ACPDIL
Trigger: TAGTATATCTGGACAAGCCAACTTGTAAATACACCA...AAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAGCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS TCA 90 bp GAATTCTGCCACCCTGATTCCAAAGCAAGAGAAGAGTCTCTGACATaGTCAGGGCCAGAAAACTGGCTGGAGAGGCAGACAGTACAGTGC +
Preference number: 5 (lower is better)
Translates to: EFCHPDSKAREESLT*SGPENWLERQTVQC
Trigger: GCACTGTACTGTCTGCCTCTCCAGCCAGTTTTCTGGCCCTGATCATGTCAGAGACTCTTCTCTTGCTTTGGAATCAGGGTGGCAGAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630821.1
CDS TCA 90 bp CCCATAAAATGGGAAGAACTGAACTACACCTCCAGTCGTGTGAACTaGATGAGGCAAGGCATGTTTCTGCGCCTCTATGGGGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: PIKWEELNYTSSRVN*MRQGMFLRLYGEDS
Trigger: GCTGTCCTCCCCATAGAGGCGCAGAAACATGCCTTGCCTCATTCAGTTCACACGACTGGAGGTGTAGTTCAGTTCTTCCCATTTTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS TCA 90 bp TTCCAGTGCCCTGTGGTTTCACAGGCTCAGTGTGACTTGCTGGGATaGTGGCAAGTGATCAGTGGTGGAAGTTCAGGCATAGAACAGAGA +
Preference number: 5 (lower is better)
Translates to: FQCPVVSQAQCDLLG*WQVISGGSSGIEQR
Trigger: TCTCTGTTCTATGCCTGAACTTCCACCACTGATCACTTGCCATCATCCCAGCAAGTCACACTGAGCCTGTGAAACCACAGGGCACTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676254.1
CDS-3UTR CAA 90 bp CTGGAGAAAGGAGCCCCAGGCCCGGCTCGGCTGACATCTGTCAGGTTTGGAAGTGGTTGTATGGTACCATaGTTAAAAGCAGGTGTTTTA +
Preference number: 5 (lower is better)
Translates to: LEKGAPGPARLTSVRFGSGCMVP*LKAGVL
Trigger: TAAAACACCTGCTTTTAACAATGGTACCATACAACC...ACTTCCAAACCTGACAGATGTCAGCCGAGCCGGGCCTGGGGCTCCTTTCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR CAA 90 bp GCAATTCCAAATGAAATGAACACAGGGCAGCTTGACAGCTCATTGGGCCCATACGGTTCATCATCAGCATaGAATTCCGCCGGCCAAAGC +
Preference number: 5 (lower is better)
Translates to: AIPNEMNTGQLDSSLGPYGSSSA*NSAGQS
Trigger: GCTTTGGCCGGCGGAATTCAATGCTGATGATGAACC...GTATGGGCCCAATGAGCTGTCAAGCTGCCCTGTGTTCATTTCATTTGGAATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR CAA 90 bp GAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAACAGTGAAGGCCGTGTaGACGATACCGGAGCCAATG +
Preference number: 5 (lower is better)
Translates to: EPLSPEYSSGHHCWLEKGTVKAV*TIPEPM
Trigger: CATTGGCTCCGGTATCGTCAACACGGCCTTCACTGT...TCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CAA 90 bp AAGGCAAGTGTCTCGACAGGGCTTAGTCTCCACCCTCAGGCATGGAACCATTCAGCAACAGTCTTGCTTTaGTTAAAATCCTGGAGCCGT +
Preference number: 5 (lower is better)
Translates to: KASVSTGLSLHPQAWNHSATVLL*LKSWSR
Trigger: ACGGCTCCAGGATTTTAACAAAAGCAAGACTGTTGC...TGAATGGTTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACACTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS CCA 90 bp GTTCTGCATATAACCATTCTTGAGGAGGCCAGGGTAGAAAATTTATaGGCTTTCCACTTGCTGCCTGTCTGGCCTTTCGGCAACCACCAA +
Preference number: 5 (lower is better)
Translates to: VLHITILEEARVENL*AFHLLPVWPFGNHQ
Trigger: TTGGTGGTTGCCGAAAGGCCAGACAGGCAGCAAGTGGAAAGCCCATAAATTTTCTACCCTGGCCTCCTCAAGAATGGTTATATGCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS-3UTR CAA 90 bp CTCCATGTCTTCTTGAGCAGTGAGTTTGCAGGCTCCCACAGGCCCTCTTCTCATGGATCAAACAGATTTTaGAGCAAGAGGACACTGATG +
Preference number: 5 (lower is better)
Translates to: LHVFLSSEFAGSHRPSSHGSNRF*SKRTLM
Trigger: CATCAGTGTCCTCTTGCTCAAAAATCTGTTTGATCC...ATGAGAAGAGGGCCTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR CAA 90 bp TGGGATAGAAGCTTTGTAGTTCATAGTTCGATTAGTGTGTCCTTAGGACATAGGTTCTCCTCGTTGCGGTaGATGAGCAGGAAGCGGGGA +
Preference number: 5 (lower is better)
Translates to: WDRSFVVHSSISVSLGHRFSSLR*MSRKRG
Trigger: TCCCCGCTTCCTGCTCATCAACCGCAACGAGGAGAA...CCTATGTCCTAAGGACACACTAATCGAACTATGAACTACAAAGCTTCTATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000674765.1
CDS-3UTR CAA 90 bp TTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGAAAGGAGCCCCAGCAACAGTCTTGCTTTaGTTAAAATCCTGGAGCCGT +
Preference number: 5 (lower is better)
Translates to: LSPEYSSGHHCWLEKGAPATVLL*LKSWSR
Trigger: ACGGCTCCAGGATTTTAACAAAAGCAAGACTGTTGC...TGGGGCTCCTTTCTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR CAA 90 bp CTTGCTTTTGTTAAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATAGCATCTCAAAGGACTaGCCCAGTTTCGAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: LAFVKILEPLSPEYSSGHSISKD*PSFEKP
Trigger: GGGCTTCTCGAAACTGGGCAAGTCCTTTGAGATGCT...ATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTTAACAAAAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000630287.2
CDS-3UTR CAA 90 bp CTTGCTTTTGTTAAAATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATAAGCCGTTGCAGTGGTaGCAACCCCACTTACTTCTG +
Preference number: 5 (lower is better)
Translates to: LAFVKILEPLSPEYSSGHKPLQW*QPHLLL
Trigger: CAGAAGTAAGTGGGGTTGCAACCACTGCAACGGCTT...ATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTTAACAAAAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS-3UTR CAA 90 bp ATCCTGGAGCCGTTAAGTCCTGAATATTCTTCTGGACATCATTGCTGGCTGGAGTGGTGTATTTACAAGTaGGCTTGTCCAGATATACTA +
Preference number: 5 (lower is better)
Translates to: ILEPLSPEYSSGHHCWLEWCIYK*ACPDIL
Trigger: TAGTATATCTGGACAAGCCAACTTGTAAATACACCA...CTCCAGCCAGCAATGATGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426263.10
ENST00000630287.2
CDS-3UTR CAA 90 bp AATATATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTAGCATCTCAAAGGACTaGCCCAGTTTCGAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: NIYKYLASIHNRAGVSMSSISKD*PSFEKP
Trigger: GGGCTTCTCGAAACTGGGCAAGTCCTTTGAGATGCT...AGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426263.10
ENST00000630287.2
ENST00000674765.1
CDS-3UTR CAA 90 bp TATATAAATATCTTGCATCTATACACAACAGGGCAGGAGTCTCCATGTCTTCTTAGGCACATAACCTCTTaGAGCCTGTCCAATAAAGGT +
Preference number: 5 (lower is better)
Translates to: YINILHLYTTGQESPCLLRHITS*SLSNKG
Trigger: ACCTTTATTGGACAGGCTCAAAGAGGTTATGTGCCT...AAGAAGACATGGAGACTCCTGCCCTGTTGTGTATAGATGCAAGATATTTATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426263.10
CDS CCA 72 bp CTGCGCTGGTGGCTCTGGCTGCGCCGGGTACGCGGGTaGCGACGGGCGTGCGAGCGGCGCTCTCCCGCTCAG +
Preference number: 6 (lower is better)
Translates to: LRWWLWLRRVRG*RRACERRSPAQ
Trigger: CTGAGCGGGAGAGCGCCGCTCGCACGCCCGTCGCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000372500.4
ENST00000415851.6
ENST00000426263.10
ENST00000460369.3
ENST00000625233.2
ENST00000630287.2
ENST00000630821.1
ENST00000674765.1
ENST00000676097.1
CDS CCA 72 bp CTGCTGGGCTCCATGGCAGCGCTGCGCTGGTGGCTCTaGCTGCGCCGGGTACGCGGGTGGCGACGGGCGTGC +
Preference number: 6 (lower is better)
Translates to: LLGSMAALRWWL*LRRVRGWRRAC
Trigger: GCACGCCCGTCGCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCATGGAGCCCAGCAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000372500.4
ENST00000415851.6
ENST00000426263.10
ENST00000460369.3
ENST00000625233.2
ENST00000630287.2
ENST00000630821.1
ENST00000674765.1
ENST00000676097.1
CDS GCA 72 bp ACGGGCGTGCGAGCGGCGCTCTCCCGCTCAGGCTCGTaGTCCGGTCCGGGGACTCCCACTGCGACTCTGACT +
Preference number: 6 (lower is better)
Translates to: TGVRAALSRSGS*SGPGTPTATLT
Trigger: AGTCAGAGTCGCAGTGGGAGTCCCCGGACCGGAGCACGAGCCTGAGCGGGAGAGCGCCGCTCGCACGCCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000372500.4
ENST00000415851.6
ENST00000426263.10
ENST00000460369.3
ENST00000625233.2
ENST00000630287.2
ENST00000630821.1
ENST00000674765.1
ENST00000676097.1
CDS GCA 72 bp TCCGACCCCCGTCGTTTGGTCTCCTGCTCCCTGGCGTaGTCACTCGGGGACCCGCGACTAGCGACCGGCACG +
Preference number: 6 (lower is better)
Translates to: SDPRRLVSCSLA*SLGDPRLATGT
Trigger: CGTGCCGGTCGCTAGTCGCGGGTCCCCGAGTGAGCACGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000415851.6
ENST00000426263.10
ENST00000460369.3
ENST00000625233.2
ENST00000630287.2
ENST00000630821.1
ENST00000674765.1
ENST00000676097.1
CDS CCA 72 bp ATCACCTTGCTGCTGGGCTCCATGGCAGCGCTGCGCTaGTGGCTCTGGCTGCGCCGGGTACGCGGGTGGCGA +
Preference number: 6 (lower is better)
Translates to: ITLLLGSMAALR*WLWLRRVRGWR
Trigger: TCGCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCATGGAGCCCAGCAGCAAGGTGAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372500.4
CDS CCA 72 bp AGCTTCTTGCTGCTGGGCTCCATGGCAGCGCTGCGCTaGTGGCTCTGGCTGCGCCGGGTACGCGGGTGGCGA +
Preference number: 6 (lower is better)
Translates to: SFLLLGSMAALR*WLWLRRVRGWR
Trigger: TCGCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCATGGAGCCCAGCAGCAAGAAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415851.6
ENST00000426263.10
ENST00000625233.2
ENST00000630287.2
ENST00000630821.1
ENST00000674765.1
CDS GCA 72 bp CGGGGACCCGCGACTAGCGACCGGCACGCTCGCTGTTaGTACCTCTTGCCTCTTGCCAGAGAGCGCGCGGAC +
Preference number: 6 (lower is better)
Translates to: RGPATSDRHARC*YLLPLARERAD
Trigger: GTCCGCGCGCTCTCTGGCAAGAGGCAAGAGGTAGCAACAGCGAGCGTGCCGGTCGCTAGTCGCGGGTCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676097.1
CDS TCA 72 bp GCTCGTGCTCCGGTCCGGGGACTCCCACTGCGACTCTaGCTCCGACCCCCGTCGTTTGGTCTCCTGCTCCCT +
Preference number: 6 (lower is better)
Translates to: ARAPVRGLPLRL*LRPPSFGLLLP
Trigger: AGGGAGCAGGAGACCAAACGACGGGGGTCGGAGTCAGAGTCGCAGTGGGAGTCCCCGGACCGGAGCACGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000372500.4
ENST00000415851.6
ENST00000426263.10
ENST00000460369.3
ENST00000625233.2
ENST00000630287.2
ENST00000630821.1
ENST00000674765.1
ENST00000676097.1
CDS GCA 72 bp TGCGACTCTGACTCCGACCCCCGTCGTTTGGTCTCCTaGTCCCTGGCGTGCTCACTCGGGGACCCGCGACTA +
Preference number: 6 (lower is better)
Translates to: CDSDSDPRRLVS*SLACSLGDPRL
Trigger: TAGTCGCGGGTCCCCGAGTGAGCACGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGAGTCAGAGTCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000372500.4
ENST00000415851.6
ENST00000426263.10
ENST00000460369.3
ENST00000625233.2
ENST00000630287.2
ENST00000630821.1
ENST00000674765.1
ENST00000676097.1
CDS GCA 72 bp GCCAGCGAGGCCTATGAGGTGCAGGGTCCGCCGGCCTaGTCGCTCCACCACAAACAGCTGTGGGCAGAGACA +
Preference number: 6 (lower is better)
Translates to: ASEAYEVQGPPA*SLHHKQLWAET
Trigger: TGTCTCTGCCCACAGCTGTTTGTGGTGGAGCGAGCAGGCCGGCGGACCCTGCACCTCATAGGCCTCGCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CCA 72 bp ACTCCCACTGCGACTCTGACTCCGACCCCCGTCGTTTaGTCTCCTGCTCCCTGGCGTGCTCACTCGGGGACC +
Preference number: 6 (lower is better)
Translates to: TPTATLTPTPVV*SPAPWRAHSGT
Trigger: GGTCCCCGAGTGAGCACGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGAGTCAGAGTCGCAGTGGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000372500.4
ENST00000415851.6
ENST00000426263.10
ENST00000460369.3
ENST00000625233.2
ENST00000630287.2
ENST00000630821.1
ENST00000674765.1
ENST00000676097.1
CDS CAA 72 bp GACTCCCACTGCGACTCTGACTCCGACCCCCGTCGTTaGGTCTCCTGCTCCCTGGCGTGCTCACTCGGGGAC +
Preference number: 6 (lower is better)
Translates to: DSHCDSDSDPRR*VSCSLACSLGD
Trigger: GTCCCCGAGTGAGCACGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGAGTCAGAGTCGCAGTGGGAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000372500.4
ENST00000415851.6
ENST00000426263.10
ENST00000460369.3
ENST00000625233.2
ENST00000630287.2
ENST00000630821.1
ENST00000674765.1
ENST00000676097.1
CDS GCA 72 bp TCCCTGGGCAGGAGGGCATGGGCCCTCCAAGGGCAGTaGCAGGACCTCTCCTACTTACCGGCCAAAGCGGTT +
Preference number: 6 (lower is better)
Translates to: SLGRRAWALQGQ*QDLSYLPAKAV
Trigger: AACCGCTTTGGCCGGTAAGTAGGAGAGGTCCTGGCACTGCCCTTGGAGGGCCCATGCCCTCCTGCCCAGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415851.6
CDS CCA 72 bp GGTCCGCCGGCCTGCTCGCTCCACCACAAACAGCTGTaGGCAGAGACAGTGTCAGTGCCACCCCTGCCTAGT +
Preference number: 6 (lower is better)
Translates to: GPPACSLHHKQL*AETVSVPPLPS
Trigger: ACTAGGCAGGGGTGGCACTGACACTGTCTCTGCCCACAGCTGTTTGTGGTGGAGCGAGCAGGCCGGCGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS GCA 72 bp AGGCTGTGGGGGCTGGGCGGAAGAGAAACTCTGCCCTaGTGGGCACAGATCCGAGAGCCACTGAAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: RLWGLGGRETLP*WAQIREPLKLW
Trigger: CCACAGCTTCAGTGGCTCTCGGATCTGTGCCCAGCAGGGCAGAGTTTCTCTTCCGCCCAGCCCCCACAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625233.2
CDS GCA 72 bp TGGACGGTGCTAAGAGGCCCCATGGTCCCCTGTCTGTaGCTGCAGCACAGTCCGCCTGTGGCAGGATGCAGA +
Preference number: 6 (lower is better)
Translates to: WTVLRGPMVPCL*LQHSPPVAGCR
Trigger: TCTGCATCCTGCCACAGGCGGACTGTGCTGCAGGCACAGACAGGGGACCATGGGGCCTCTTAGCACCGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CAA 90 bp GTCCCGCGCAGCTTCTTTAGCACACTCTTGGCCCGGTTCTCCTCGTaGCGGTTGATGAGCAGGAAGCGGGGACTCTCGGGGCAGAAGGGC +
Preference number: 6 (lower is better)
Translates to: VPRSFFSTLLARFSS*RLMSRKRGLSGQKG
Trigger: GCCCTTCTGCCCCGAGAGTCCCCGCTTCCTGCTCATCAACCGCAACGAGGAGAACCGGGCCAAGAGTGTGCTAAAGAAGCTGCGCGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426263.10
ENST00000674765.1
ENST00000675112.1
ENST00000676254.1
CDS CAA 90 bp AGGGCCGGGATGAAGATGATGCTCAGCAGCAGGGGCCACAGGTCCTaGTTGCCCATGATGGAGTCCAGGCCGAACACCTGGGCGATGAGG +
Preference number: 6 (lower is better)
Translates to: RAGMKMMLSSRGHRS*LPMMESRPNTWAMR
Trigger: CCTCATCGCCCAGGTGTTCGGCCTGGACTCCATCATGGGCAACAAGGACCTGTGGCCCCTGCTGCTGAGCATCATCTTCATCCCGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426263.10
ENST00000674765.1
ENST00000675112.1
ENST00000676254.1
CDS GCA 72 bp GCAACAGTCTTGCTTTTGCCAGCGAGGCCTATGAGGTaGAGGGTCCGCCGGCCTGCTCGCTCCACCACAAAC +
Preference number: 6 (lower is better)
Translates to: ATVLLLPARPMR*RVRRPARSTTN
Trigger: GTTTGTGGTGGAGCGAGCAGGCCGGCGGACCCTGCACCTCATAGGCCTCGCTGGCAAAAGCAAGACTGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674765.1
CDS GCA 72 bp GTGTTGAGTCCACCCGCTGGGAGTGGTAATGTGGTGTaGATGTGGACGGTGCTAAGAGGCCCCATGGTCCCC +
Preference number: 6 (lower is better)
Translates to: VLSPPAGSGNVV*MWTVLRGPMVP
Trigger: GGGGACCATGGGGCCTCTTAGCACCGTCCACATGCACACCACATTACCACTCCCAGCGGGTGGACTCAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CCA 72 bp CAATCTTCCATAAATAAACCTTGCTGCTGGGCTCCATaGCAGCGCTGCGCTGGTGGCTCTGGCTGCGCCGGG +
Preference number: 6 (lower is better)
Translates to: QSSINKPCCWAP*QRCAGGSGCAG
Trigger: CCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCATGGAGCCCAGCAGCAAGGTTTATTTATGGAAGATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460369.3
CDS CCA 72 bp AGTCCACCCGCTGGGAGTGGTAATGTGGTGTGCATGTaGACGGTGCTAAGAGGCCCCATGGTCCCCTGTCTG +
Preference number: 6 (lower is better)
Translates to: SPPAGSGNVVCM*TVLRGPMVPCL
Trigger: CAGACAGGGGACCATGGGGCCTCTTAGCACCGTCCACATGCACACCACATTACCACTCCCAGCGGGTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CAA 72 bp GGAGAGAGGGTACTGTGCATAACAGCCTGCGGCATGTaGGGGGAAGGCGGGCCCTGTGGTTGGAAGCCTAGA +
Preference number: 6 (lower is better)
Translates to: GERVLCITACGM*GEGGPCGWKPR
Trigger: TCTAGGCTTCCAACCACAGGGCCCGCCTTCCCCCAACATGCCGCAGGCTGTTATGCACAGTACCCTCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625233.2
CDS TCA 72 bp CCTAGCAACTCACCAGCAGTGCTAGCGCGATGGTCATaGGTATGGCACAACCCGCCATGCCAGCGAGGCCTA +
Preference number: 6 (lower is better)
Translates to: PSNSPAVLARWS*VWHNPPCQRGL
Trigger: TAGGCCTCGCTGGCATGGCGGGTTGTGCCATACTCATGACCATCGCGCTAGCACTGCTGGTGAGTTGCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CCA 72 bp CACGAAGGGCTGTGGGTGACACTTCACCCACATACATaGGCACGAAGCCTGTGGTCAGGCCGCAGTACACAC +
Preference number: 6 (lower is better)
Translates to: HEGLWVTLHPHT*ARSLWSGRSTH
Trigger: GTGTGTACTGCGGCCTGACCACAGGCTTCGTGCCCATGTATGTGGGTGAAGTGTCACCCACAGCCCTTCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426263.10
ENST00000475162.3
ENST00000625233.2
ENST00000630287.2
ENST00000674765.1
ENST00000675112.1
ENST00000676254.1
CDS CCA 72 bp GTGTACCATAGTTGTCCTCTGCAAGGCTGTGGGGGCTaGGCGGAAGAGAAACTCTGCCCTGCTGGGCACAGA +
Preference number: 6 (lower is better)
Translates to: VYHSCPLQGCGG*AEEKLCPAGHR
Trigger: TCTGTGCCCAGCAGGGCAGAGTTTCTCTTCCGCCCAGCCCCCACAGCCTTGCAGAGGACAACTATGGTACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625233.2
CDS CAA 72 bp TTTAGCACACTCTTGGCCCGGTTCTCCTCGTTGCGGTaGATGAGCAGGAAGCGGGGACTCTCGGGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: FSTLLARFSSLR*MSRKRGLSGQK
Trigger: CTTCTGCCCCGAGAGTCCCCGCTTCCTGCTCATCAACCGCAACGAGGAGAACCGGGCCAAGAGTGTGCTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426263.10
ENST00000674765.1
ENST00000675112.1
ENST00000676254.1
CDS CAA 72 bp AGCTTCTTTAGCACACTCTTGGCCCGGTTCTCCTCGTaGCGGTTGATGAGCAGGAAGCGGGGACTCTCGGGG +
Preference number: 6 (lower is better)
Translates to: SFFSTLLARFSS*RLMSRKRGLSG
Trigger: CCCCGAGAGTCCCCGCTTCCTGCTCATCAACCGCAACGAGGAGAACCGGGCCAAGAGTGTGCTAAAGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426263.10
ENST00000674765.1
ENST00000675112.1
ENST00000676254.1
CDS CAA 90 bp AAGCCTCCTGGAGAGAGGGTACTGTGCATAACAGCCTGCGGCATGTaGGGGGAAGGCGGGCCCTGTGGTTGGAAGCCTAGAGTGAGAAGA +
Preference number: 6 (lower is better)
Translates to: KPPGERVLCITACGM*GEGGPCGWKPRVRR
Trigger: TCTTCTCACTCTAGGCTTCCAACCACAGGGCCCGCCTTCCCCCAACATGCCGCAGGCTGTTATGCACAGTACCCTCTCTCCAGGAGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625233.2
CDS CAA 90 bp TGCAGCCACCAAAAGGCCTGCCAGCCTGGGGCTGAGACAGGCATTTaGGGATATGAAGCCCAGGCAAACTCTCCCGCATCCCTCACTCTC +
Preference number: 6 (lower is better)
Translates to: CSHQKACQPGAETGI*GYEAQANSPASLTL
Trigger: GAGAGTGAGGGATGCGGGAGAGTTTGCCTGGGCTTCATATCCCAAAATGCCTGTCTCAGCCCCAGGCTGGCAGGCCTTTTGGTGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CAA 90 bp AGAAGACCTGCCAGACAAGAGAAACTGTTGGGGCCTACCTGGACATaGTGGCCCTTCCCTGCCTCTGTAGCAGTGGATGTGGGACCCAGG +
Preference number: 6 (lower is better)
Translates to: RRPARQEKLLGPTWT*WPFPASVAVDVGPR
Trigger: CCTGGGTCCCACATCCACTGCTACAGAGGCAGGGAAGGGCCACAATGTCCAGGTAGGCCCCAACAGTTTCTCTTGTCTGGCAGGTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674545.1
ENST00000675112.1
CDS GCA 72 bp GGCCTTGCCTCAAGAGCTGAGAAAGTCACAGGGCACTaGAAAGACCAGTGGGGAAGATGGCACTGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: GLASRAEKVTGH*KDQWGRWHCLL
Trigger: GAGGAGGCAGTGCCATCTTCCCCACTGGTCTTTGCAGTGCCCTGTGACTTTCTCAGCTCTTGAGGCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CCA 72 bp CACACACTGCCTGCTAGGCCCTGGACTGTCCAGGGCTaGAGTGAGGGTAGTTCATGCAAGGAAGTGTCAGAC +
Preference number: 6 (lower is better)
Translates to: HTLPARPWTVQG*SEGSSCKEVSD
Trigger: GTCTGACACTTCCTTGCATGAACTACCCTCACTCCAGCCCTGGACAGTCCAGGGCCTAGCAGGCAGTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460369.3
ENST00000629908.1
CDS CAA 72 bp CAAAAGGCCTGCCAGCCTGGGGCTGAGACAGGCATTTaGGGATATGAAGCCCAGGCAAACTCTCCCGCATCC +
Preference number: 6 (lower is better)
Translates to: QKACQPGAETGI*GYEAQANSPAS
Trigger: GGATGCGGGAGAGTTTGCCTGGGCTTCATATCCCAAAATGCCTGTCTCAGCCCCAGGCTGGCAGGCCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CAA 90 bp AGAGAGGGCCAGGGCCTGGCTCTGCCACAGATTCACTGCATGTTCTaGAGCCAAGTCCCTCTATTTTTGTGGGCCTCACTTTCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: REGQGLALPQIHCMF*SQVPLFLWASLSPG
Trigger: GCCTGGGGAAAGTGAGGCCCACAAAAATAGAGGGACTTGGCTCAAGAACATGCAGTGAATCTGTGGCAGAGCCAGGCCCTGGCCCTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676254.1
CDS GCA 72 bp AGCTCCAGGATGGTGACCTTCTTCTCCCGCATCATCTaGCGACTCTCTTCCTTCATCTCCACTCTTGGCCCG +
Preference number: 6 (lower is better)
Translates to: SSRMVTFFSRII*RLSSFISTLGP
Trigger: CGGGCCAAGAGTGGAGATGAAGGAAGAGAGTCGGCAGATGATGCGGGAGAAGAAGGTCACCATCCTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669445.1
CDS CCA 72 bp AGACCTGCCAGACAAGAGAAACTGTTGGGGCCTACCTaGACATTGTGGCCCTTCCCTGCCTCTGTAGCAGTG +
Preference number: 6 (lower is better)
Translates to: RPARQEKLLGPT*TLWPFPASVAV
Trigger: CACTGCTACAGAGGCAGGGAAGGGCCACAATGTCCAGGTAGGCCCCAACAGTTTCTCTTGTCTGGCAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674545.1
ENST00000675112.1
CDS CAA 72 bp GCCAGACAAGAGAAACTGTTGGGGCCTACCTGGACATaGTGGCCCTTCCCTGCCTCTGTAGCAGTGGATGTG +
Preference number: 6 (lower is better)
Translates to: ARQEKLLGPTWT*WPFPASVAVDV
Trigger: CACATCCACTGCTACAGAGGCAGGGAAGGGCCACAATGTCCAGGTAGGCCCCAACAGTTTCTCTTGTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674545.1
ENST00000675112.1
CDS TCA 72 bp GTGAGAGTTTGGGGTCTGGGACCAGAGGTGCTGCGCTaGGAATCCATCAAGCAGGGAGGAGCAAGTTCAAGA +
Preference number: 6 (lower is better)
Translates to: VRVWGLGPEVLR*ESIKQGGASSR
Trigger: TCTTGAACTTGCTCCTCCCTGCTTGATGGATTCTCAGCGCAGCACCTCTGGTCCCAGACCCCAAACTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS GCA 72 bp CCCTGGACTGTCCAGGGCTGGAGTGAGGGTAGTTCATaGAAGGAAGTGTCAGACCACATGGTAACCCCACAA +
Preference number: 6 (lower is better)
Translates to: PWTVQGWSEGSS*KEVSDHMVTPQ
Trigger: TTGTGGGGTTACCATGTGGTCTGACACTTCCTTGCATGAACTACCCTCACTCCAGCCCTGGACAGTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460369.3
ENST00000629908.1
CDS GCA 72 bp CCAACTCTCCCACTTCCCCTAACGTGTGGTTTCCAGTaGCCTGTGGTTTCACAGGCTCAGTGTGACTTGCTG +
Preference number: 6 (lower is better)
Translates to: PTLPLPLTCGFQ*PVVSQAQCDLL
Trigger: CAGCAAGTCACACTGAGCCTGTGAAACCACAGGGCACTGGAAACCACACGTTAGGGGAAGTGGGAGAGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676254.1
CDS CCA 72 bp AGACAAGAGAAACTGTTGGGGCCTACCTGGACATTGTaGCCCTTCCCTGCCTCTGTAGCAGTGGATGTGGGA +
Preference number: 6 (lower is better)
Translates to: RQEKLLGPTWTL*PFPASVAVDVG
Trigger: TCCCACATCCACTGCTACAGAGGCAGGGAAGGGCCACAATGTCCAGGTAGGCCCCAACAGTTTCTCTTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674545.1
ENST00000675112.1
CDS CCA 72 bp GAGCAGAGCTATGCGAGAAGGCAGGAAGCCTGGGGATaGTCCTGGATTTGTTGTGTATCCAGCATTGGGCCT +
Preference number: 6 (lower is better)
Translates to: EQSYARRQEAWG*SWICCVSSIGP
Trigger: AGGCCCAATGCTGGATACACAACAAATCCAGGACCATCCCCAGGCTTCCTGCCTTCTCGCATAGCTCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CCA 72 bp CAGAAGGGACACTGCACTGCAGTGACCTTACGGGCTTaGGGTCTAAAGGGAAACTTCTTCGGCAGAGGCGTA +
Preference number: 6 (lower is better)
Translates to: QKGHCTAVTLRA*GLKGNFFGRGV
Trigger: TACGCCTCTGCCGAAGAAGTTTCCCTTTAGACCCCAAGCCCGTAAGGTCACTGCAGTGCAGTGTCCCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675112.1
CDS GCA 72 bp AGAGAGGGCCAGGGCCTGGCTCTGCCACAGATTCACTaGATGTTCTTGAGCCAAGTCCCTCTATTTTTGTGG +
Preference number: 6 (lower is better)
Translates to: REGQGLALPQIH*MFLSQVPLFLW
Trigger: CCACAAAAATAGAGGGACTTGGCTCAAGAACATGCAGTGAATCTGTGGCAGAGCCAGGCCCTGGCCCTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676254.1
CDS CCA 72 bp GGAGTAATAGAAGACCTGCCAGACAAGAGAAACTGTTaGGGCCTACCTGGACATTGTGGCCCTTCCCTGCCT +
Preference number: 6 (lower is better)
Translates to: GVIEDLPDKRNC*GLPGHCGPSLP
Trigger: AGGCAGGGAAGGGCCACAATGTCCAGGTAGGCCCCAACAGTTTCTCTTGTCTGGCAGGTCTTCTATTACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674545.1
ENST00000675112.1
CDS CAA 72 bp TGGAGTAATAGAAGACCTGCCAGACAAGAGAAACTGTaGGGGCCTACCTGGACATTGTGGCCCTTCCCTGCC +
Preference number: 6 (lower is better)
Translates to: WSNRRPARQEKL*GPTWTLWPFPA
Trigger: GGCAGGGAAGGGCCACAATGTCCAGGTAGGCCCCAACAGTTTCTCTTGTCTGGCAGGTCTTCTATTACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674545.1
ENST00000675112.1
CDS CAA 90 bp AGATGCTCGTGGAGTAATAGAAGACCTGCCAGACAAGAGAAACTGTaGGGGCCTACCTGGACATTGTGGCCCTTCCCTGCCTCTGTAGCA +
Preference number: 6 (lower is better)
Translates to: RCSWSNRRPARQEKL*GPTWTLWPFPASVA
Trigger: TGCTACAGAGGCAGGGAAGGGCCACAATGTCCAGGTAGGCCCCAACAGTTTCTCTTGTCTGGCAGGTCTTCTATTACTCCACGAGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674545.1
ENST00000675112.1
CDS CAA 90 bp TGCCTGTCTGGCCTTTCGGCAACCACCAAACTTTCCAAGCCCAGGTaGAGCTGTAAAATGACAGTCATGGTGCTTTCCTTGCCCAGAGGC +
Preference number: 6 (lower is better)
Translates to: CLSGLSATTKLSKPR*SCKMTVMVLSLPRG
Trigger: GCCTCTGGGCAAGGAAAGCACCATGACTGTCATTTTACAGCTCAACCTGGGCTTGGAAAGTTTGGTGGTTGCCGAAAGGCCAGACAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS GCA 72 bp AAGGGGACAAATACTCAGGCAGAAGGGACACTGCACTaGAGTGACCTTACGGGCTTGGGGTCTAAAGGGAAA +
Preference number: 6 (lower is better)
Translates to: KGTNTQAEGTLH*SDLTGLGSKGK
Trigger: TTTCCCTTTAGACCCCAAGCCCGTAAGGTCACTGCAGTGCAGTGTCCCTTCTGCCTGAGTATTTGTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674545.1
ENST00000675112.1
CDS CAA 72 bp GAGGAGGCCAGGGTAGAAAATTTATGGGCTTTCCACTaGCTGCCTGTCTGGCCTTTCGGCAACCACCAAACT +
Preference number: 6 (lower is better)
Translates to: EEARVENLWAFH*LPVWPFGNHQT
Trigger: AGTTTGGTGGTTGCCGAAAGGCCAGACAGGCAGCAAGTGGAAAGCCCATAAATTTTCTACCCTGGCCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CAA 72 bp CAAAATGATTTAAGTCCTGCAGGGTGGCTGCAAGTGTaGAGTCCACCCGCTGGGAGTGGTAATGTGGTGTGC +
Preference number: 6 (lower is better)
Translates to: QNDLSPAGWLQV*SPPAGSGNVVC
Trigger: GCACACCACATTACCACTCCCAGCGGGTGGACTCAACACTTGCAGCCACCCTGCAGGACTTAAATCATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CAA 72 bp CAGGGCCTGGCTCTGCCACAGATTCACTGCATGTTCTaGAGCCAAGTCCCTCTATTTTTGTGGGCCTCACTT +
Preference number: 6 (lower is better)
Translates to: QGLALPQIHCMF*SQVPLFLWASL
Trigger: AAGTGAGGCCCACAAAAATAGAGGGACTTGGCTCAAGAACATGCAGTGAATCTGTGGCAGAGCCAGGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676254.1
CDS CAA 90 bp AATACTCAGGCAGAAGGGACACTGCACTGCAGTGACCTTACGGGCTaGGGGTCTAAAGGGAAACTTCTTCGGCAGAGGCGTATCTGTTGT +
Preference number: 6 (lower is better)
Translates to: NTQAEGTLHCSDLTG*GSKGKLLRQRRICC
Trigger: ACAACAGATACGCCTCTGCCGAAGAAGTTTCCCTTTAGACCCCAAGCCCGTAAGGTCACTGCAGTGCAGTGTCCCTTCTGCCTGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675112.1
CDS CAA 90 bp ACCATTCTTGAGGAGGCCAGGGTAGAAAATTTATGGGCTTTCCACTaGCTGCCTGTCTGGCCTTTCGGCAACCACCAAACTTTCCAAGCC +
Preference number: 6 (lower is better)
Translates to: TILEEARVENLWAFH*LPVWPFGNHQTFQA
Trigger: GGCTTGGAAAGTTTGGTGGTTGCCGAAAGGCCAGACAGGCAGCAAGTGGAAAGCCCATAAATTTTCTACCCTGGCCTCCTCAAGAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS TCA 72 bp CACCCTGATTCCAAAGCAAGAGAAGAGTCTCTGACATaGTCAGGGCCAGAAAACTGGCTGGAGAGGCAGACA +
Preference number: 6 (lower is better)
Translates to: HPDSKAREESLT*SGPENWLERQT
Trigger: TGTCTGCCTCTCCAGCCAGTTTTCTGGCCCTGATCATGTCAGAGACTCTTCTCTTGCTTTGGAATCAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630821.1
CDS TCA 72 bp CCTGTGGTTTCACAGGCTCAGTGTGACTTGCTGGGATaGTGGCAAGTGATCAGTGGTGGAAGTTCAGGCATA +
Preference number: 6 (lower is better)
Translates to: PVVSQAQCDLLG*WQVISGGSSGI
Trigger: TATGCCTGAACTTCCACCACTGATCACTTGCCATCATCCCAGCAAGTCACACTGAGCCTGTGAAACCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676254.1
CDS TCA 72 bp AGGGCCTGGCTCTGCCACAGATTCACTGCATGTTCTTaGGCCAAGTCCCTCTATTTTTGTGGGCCTCACTTT +
Preference number: 6 (lower is better)
Translates to: RAWLCHRFTACS*AKSLYFCGPHF
Trigger: AAAGTGAGGCCCACAAAAATAGAGGGACTTGGCTCAAGAACATGCAGTGAATCTGTGGCAGAGCCAGGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676254.1
CDS GCA 72 bp CGCCTCTATGGGGAGGACAGCACTACTTCCCGGGGTTaGTGTGAAGATGAATTGAGGCTACAGATGAAGATT +
Preference number: 6 (lower is better)
Translates to: RLYGEDSTTSRG*CEDELRLQMKI
Trigger: AATCTTCATCTGTAGCCTCAATTCATCTTCACAGCAACCCCGGGAAGTAGTGCTGTCCTCCCCATAGAGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CAA 72 bp AGCACAGCGGTCACAGTCACAGGCCTGGGACTGAGGTaGATTCCTGGCTTCATCCTTTATCTGACAAGTTAC +
Preference number: 6 (lower is better)
Translates to: STAVTVTGLGLR*IPGFILYLTSY
Trigger: GTAACTTGTCAGATAAAGGATGAAGCCAGGAATCAACCTCAGTCCCAGGCCTGTGACTGTGACCGCTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CAA 90 bp CTAAAGGGAAACTTCTTCGGCAGAGGCGTATCTGTTGTTTCAAGTTaGGGACTTGTTCACCATGCACACTTGACCAGAGGGCTTGGCTGG +
Preference number: 6 (lower is better)
Translates to: LKGNFFGRGVSVVSS*GLVHHAHLTRGLGW
Trigger: CCAGCCAAGCCCTCTGGTCAAGTGTGCATGGTGAACAAGTCCCAAACTTGAAACAACAGATACGCCTCTGCCGAAGAAGTTTCCCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675112.1
CDS TCA 72 bp AGGGTTAATATTAGGCAAAGCAATTCCTTAAGGAGGTaGGAGTTTGGGGTCTGGGACCAGAGGTGCTGCGCT +
Preference number: 6 (lower is better)
Translates to: RVNIRQSNSLRR*EFGVWDQRCCA
Trigger: AGCGCAGCACCTCTGGTCCCAGACCCCAAACTCTCACCTCCTTAAGGAATTGCTTTGCCTAATATTAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS GCA 72 bp CCCCAGGATTCTGTGGGACCTGAGATTCTAGAATTCTaGCACCCTGATTCCAAAGCAAGAGAAGAGTCTCTG +
Preference number: 6 (lower is better)
Translates to: PQDSVGPEILEF*HPDSKAREESL
Trigger: CAGAGACTCTTCTCTTGCTTTGGAATCAGGGTGGCAGAATTCTAGAATCTCAGGTCCCACAGAATCCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630821.1
CDS CCA 72 bp ATAAATGACTCTAATTCAGGTGGTGGCGTGAGACTGTaGGCATGTGTGATGTGCAACAGAGCAGGCTGGTGT +
Preference number: 6 (lower is better)
Translates to: INDSNSGGGVRL*ACVMCNRAGWC
Trigger: ACACCAGCCTGCTCTGTTGCACATCACACATGCCCACAGTCTCACGCCACCACCTGAATTAGAGTCATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630821.1
CDS CCA 72 bp GTAGAAAATTTATGGGCTTTCCACTTGCTGCCTGTCTaGCCTTTCGGCAACCACCAAACTTTCCAAGCCCAG +
Preference number: 6 (lower is better)
Translates to: VENLWAFHLLPV*PFGNHQTFQAQ
Trigger: CTGGGCTTGGAAAGTTTGGTGGTTGCCGAAAGGCCAGACAGGCAGCAAGTGGAAAGCCCATAAATTTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CCA 72 bp ATAACCATTCTTGAGGAGGCCAGGGTAGAAAATTTATaGGCTTTCCACTTGCTGCCTGTCTGGCCTTTCGGC +
Preference number: 6 (lower is better)
Translates to: ITILEEARVENL*AFHLLPVWPFG
Trigger: GCCGAAAGGCCAGACAGGCAGCAAGTGGAAAGCCCATAAATTTTCTACCCTGGCCTCCTCAAGAATGGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CAA 72 bp GGCCTTTCGGCAACCACCAAACTTTCCAAGCCCAGGTaGAGCTGTAAAATGACAGTCATGGTGCTTTCCTTG +
Preference number: 6 (lower is better)
Translates to: GLSATTKLSKPR*SCKMTVMVLSL
Trigger: CAAGGAAAGCACCATGACTGTCATTTTACAGCTCAACCTGGGCTTGGAAAGTTTGGTGGTTGCCGAAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CCA 72 bp GGTCACAGTCACAGGCCTGGGACTGAGGTTGATTCCTaGCTTCATCCTTTATCTGACAAGTTACTAACCTCA +
Preference number: 6 (lower is better)
Translates to: GHSHRPGTEVDS*LHPLSDKLLTS
Trigger: TGAGGTTAGTAACTTGTCAGATAAAGGATGAAGCCAGGAATCAACCTCAGTCCCAGGCCTGTGACTGTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674545.1
CDS CAA 72 bp AACTTCTTCGGCAGAGGCGTATCTGTTGTTTCAAGTTaGGGACTTGTTCACCATGCACACTTGACCAGAGGG +
Preference number: 6 (lower is better)
Translates to: NFFGRGVSVVSS*GLVHHAHLTRG
Trigger: CCCTCTGGTCAAGTGTGCATGGTGAACAAGTCCCAAACTTGAAACAACAGATACGCCTCTGCCGAAGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675112.1