RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC28A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000156222

Ensembl transcript IDs: ENST00000286749.3, ENST00000338602.6, ENST00000394573.6, ENST00000538177.5

Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTGGGCGGGAAGTCTGAATTTTCCCTCCACAACCTCCCTCTCCTaGCCTGTGACATCGCTGAGATTTCCAGCGCTCCAAGGAATCCAG +
Preference number: 1 (lower is better)
Translates to: GWAGSLNFPSTTSLS*PVTSLRFPALQGIQ
Trigger: CTGGATTCCTTGGAGCGCTGGAAATCTCAGCGATGTCACAGGGCAGGAGAGGGAGGTTGTGGAGGGAAAATTCAGACTTCCCGCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
3UTR CCA 90 bp AGTCCATCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATaGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGT +
Preference number: 1 (lower is better)
Translates to: SPSWNPLNASQDSVP*DLSLGSTLRKGGKG
Trigger: ACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGATGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR TCA 90 bp CACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTGTGGGATTaGGCTGGGTCTAAGTCCTGTGGCTTCCCTGAAGAGGGCTCTGGG +
Preference number: 1 (lower is better)
Translates to: HSLHTHSMNPSQLWD*AGSKSCGFPEEGSG
Trigger: CCCAGAGCCCTCTTCAGGGAAGCCACAGGACTTAGACCCAGCTCAATCCCACAATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR TCA 90 bp TTATTTAACCCAGTGGTTCCAAACCTAGTCCATCATGGAACCCTCTaGACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAA +
Preference number: 1 (lower is better)
Translates to: LFNPVVPNLVHHGTL*TPPRTVCHGTSVWE
Trigger: TTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGATGGACTAGGTTTGGAACCACTGGGTTAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR TCA 90 bp ATGTCCTTCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATaGACCCTTCCCAATTGTGGGATTGAGCTGGGTCTAAGTCCTGTG +
Preference number: 1 (lower is better)
Translates to: MSFLMSSLTLCTLTP*TLPNCGIELGLSPV
Trigger: CACAGGACTTAGACCCAGCTCAATCCCACAATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGAAGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR CCA 90 bp CTTATAAAACACATAAATTTAGAGCTGCCTGGTGAAATGGTGGGCTaGGCGGGAAGTCTGAATTTTCCCTCCACAACCTCCCTCTCCTGC +
Preference number: 1 (lower is better)
Translates to: LIKHINLELPGEMVG*AGSLNFPSTTSLSC
Trigger: GCAGGAGAGGGAGGTTGTGGAGGGAAAATTCAGACTTCCCGCCCAGCCCACCATTTCACCAGGCAGCTCTAAATTTATGTGTTTTATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338602.6
3UTR-3UTR CCA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAGAAGGTGGGGACAGATaGTTCCCGGGGGAGAACAGC +
Preference number: 2 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEEEGGDR*FPGENS
Trigger: GCTGTTCTCCCCCGGGAACCATCTGTCCCCACCTTC...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR-3UTR CCA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAGAGCAGGAAGGGGGATaGAGTGGGACATGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEEEQEGG*SGTCPS
Trigger: GGAAGGACATGTCCCACTCCATCCCCCTTCCTGCTC...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR-3UTR GCA 90 bp AACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGGAGGAGGCTTTGGTGTaGAGCCCACAACAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: NASQDSVPWDLSLGSTLREEALV*SPQQKG
Trigger: TCCCTTCTGTTGTGGGCTGCACACCAAAGCCTCCTC...CCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR-3UTR GCA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAGAGGAGGCTTTGGTGTaGAGCCCACAACAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEEEEALV*SPQQKG
Trigger: TCCCTTCTGTTGTGGGCTGCACACCAAAGCCTCCTC...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR-3UTR CCA 90 bp ATCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGAAGGTGGGGACAGATaGTTCCCGGGGGAGAACAGC +
Preference number: 2 (lower is better)
Translates to: IMEPSERLPGQCAMGPQFEGGDR*FPGENS
Trigger: GCTGTTCTCCCCCGGGAACCATCTGTCCCCACCTTC...AAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR-3UTR CCA 90 bp TCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGAGGGGAGGAGGCTTTaGTGTGCAGCCCACAACAGA +
Preference number: 2 (lower is better)
Translates to: SWNPLNASQDSVPWDLSLEGRRL*CAAHNR
Trigger: TCTGTTGTGGGCTGCACACCAAAGCCTCCTCCCCTC...CAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR-3UTR CCA 90 bp AGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTGAGGGGAGGAGGCTTTaGTGTGCAGCCCACAACAGA +
Preference number: 2 (lower is better)
Translates to: SVPWDLSLGSTLRKGGKGEGRRL*CAAHNR
Trigger: TCTGTTGTGGGCTGCACACCAAAGCCTCCTCCCCTC...ACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR CAA 90 bp AACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTaGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCTCTGAAAGC +
Preference number: 2 (lower is better)
Translates to: NPLNASQDSVPWDLS*GSTLRKGGKGFSES
Trigger: GCTTTCAGAGAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR-3UTR CCA 90 bp ACCCTTCCCAATTGTGGGATTGAGCTGGGTCTAAGTCCTGTGGCTTCCCTGAAGGAAGGTGGGGACAGATaGTTCCCGGGGGAGAACAGC +
Preference number: 2 (lower is better)
Translates to: TLPNCGIELGLSPVASLKEGGDR*FPGENS
Trigger: GCTGTTCTCCCCCGGGAACCATCTGTCCCCACCTTC...CTTCAGGGAAGCCACAGGACTTAGACCCAGCTCAATCCCACAATTGGGAAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR-3UTR TCA 90 bp AGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTGCACACTCACTCCATaGACCCTTCCCAATTGTGGG +
Preference number: 2 (lower is better)
Translates to: SVPWDLSLGSTLRKGGKGCTLTP*TLPNCG
Trigger: CCCACAATTGGGAAGGGTTCATGGAGTGAGTGTGCA...ACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR-3UTR CCA 90 bp CTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGGGAAGGGGGATGGAGTaGGACATGTCCTTCCTTATG +
Preference number: 2 (lower is better)
Translates to: LPGQCAMGPQFGKHSEERGRGME*DMSFLM
Trigger: CATAAGGAAGGACATGTCCCACTCCATCCCCCTTCC...CCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR-3UTR CCA 90 bp CCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCTCTGGAAGGGGGATGGAGTaGGACATGTCCTTCCTTATG +
Preference number: 2 (lower is better)
Translates to: PWDLSLGSTLRKGGKGFSGRGME*DMSFLM
Trigger: CATAAGGAAGGACATGTCCCACTCCATCCCCCTTCC...AGAGAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR-3UTR TCA 90 bp TGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTTCCCAATTGTGGGATTaGGCTGGGTCTAAGTCCTGT +
Preference number: 2 (lower is better)
Translates to: CAMGPQFGKHSEERREGFSQLWD*AGSKSC
Trigger: ACAGGACTTAGACCCAGCTCAATCCCACAATTGGGA...AAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR-3UTR CCA 90 bp TTTAAATGTGTTCATCCACAGGCTGGCTCAAATCATTTTGCTGTGGTATGTGGATACATCAGAATCCCCTaGAGGCTAATGAAAAATACC +
Preference number: 2 (lower is better)
Translates to: FKCVHPQAGSNHFAVVCGYIRIP*RLMKNT
Trigger: GGTATTTTTCATTAGCCTCCAGGGGATTCTGATGTA...TCCACATACCACAGCAAAATGATTTGAGCCAGCCTGTGGATGAACACATTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338602.6
3UTR-3UTR CAA 90 bp CTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGGGACCAGGGTGCTGTTaGGATGTGGAGGGGAAACGG +
Preference number: 3 (lower is better)
Translates to: LPGQCAMGPQFGKHSEERGPGCC*DVEGKR
Trigger: CCGTTTCCCCTCCACATCCAAACAGCACCCTGGTCC...CCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR-3UTR CAA 90 bp CCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCTCTGGACCAGGGTGCTGTTaGGATGTGGAGGGGAAACGG +
Preference number: 3 (lower is better)
Translates to: PWDLSLGSTLRKGGKGFSGPGCC*DVEGKR
Trigger: CCGTTTCCCCTCCACATCCAAACAGCACCCTGGTCC...AGAGAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR CCA 72 bp TGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATaGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGC +
Preference number: 3 (lower is better)
Translates to: WNPLNASQDSVP*DLSLGSTLRKG
Trigger: GCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR TCA 72 bp CCAGTGGTTCCAAACCTAGTCCATCATGGAACCCTCTaGACGCCTCCCAGGACAGTGTGCCATGGGACCTCA +
Preference number: 3 (lower is better)
Translates to: PVVPNLVHHGTL*TPPRTVCHGTS
Trigger: TGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGATGGACTAGGTTTGGAACCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR CCA 72 bp CACATAAATTTAGAGCTGCCTGGTGAAATGGTGGGCTaGGCGGGAAGTCTGAATTTTCCCTCCACAACCTCC +
Preference number: 3 (lower is better)
Translates to: HINLELPGEMVG*AGSLNFPSTTS
Trigger: GGAGGTTGTGGAGGGAAAATTCAGACTTCCCGCCCAGCCCACCATTTCACCAGGCAGCTCTAAATTTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
3UTR TCA 72 bp CTTATGTCCTCACTCACTCTCTGCACACTCACTCCATaGACCCTTCCCAATTGTGGGATTGAGCTGGGTCTA +
Preference number: 3 (lower is better)
Translates to: LMSSLTLCTLTP*TLPNCGIELGL
Trigger: TAGACCCAGCTCAATCCCACAATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR CCA 72 bp TCCACAGGCTGGCTCAAATCATTTTGCTGTGGTATGTaGATCTCACTTTGGGAAAGTGAGAGGCACCCCTGT +
Preference number: 3 (lower is better)
Translates to: STGWLKSFCCGM*ISLWESERHPC
Trigger: ACAGGGGTGCCTCTCACTTTCCCAAAGTGAGATCCACATACCACAGCAAAATGATTTGAGCCAGCCTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338602.6
3UTR TCA 72 bp ATCGCTGAGATTTCCAGCGCTCCAAGGAATCCAGTTTaGAAAGCAGCAGATCTCAAACTGTTGTCCAAGGAC +
Preference number: 3 (lower is better)
Translates to: IAEISSAPRNPV*KAADLKLLSKD
Trigger: GTCCTTGGACAACAGTTTGAGATCTGCTGCTTTTCAAACTGGATTCCTTGGAGCGCTGGAAATCTCAGCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338602.6
3UTR-3UTR CAA 90 bp GGCTGGCTCAAATCATTTTGCTGTGGTATGTGGATCTCACTTTGGGAAAGTGAGAGTCTTTGGGTATCTTaGGTCACCAGCTTCTTCATC +
Preference number: 3 (lower is better)
Translates to: GWLKSFCCGMWISLWESESLWVS*VTSFFI
Trigger: GATGAAGAAGCTGGTGACCAAAGATACCCAAAGACT...CTCACTTTCCCAAAGTGAGATCCACATACCACAGCAAAATGATTTGAGCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
3UTR-3UTR CAA 90 bp CACAGGCTGGCTCAAATCATTTTGCTGTGGTATGTGGATCTCACTTTGGGAAAGTCCAAGGAATCCAGTTaGAAAAGCAGCAGATCTCAA +
Preference number: 3 (lower is better)
Translates to: HRLAQIILLWYVDLTLGKSKESS*KSSRSQ
Trigger: TTGAGATCTGCTGCTTTTCAAACTGGATTCCTTGGA...CTTTCCCAAAGTGAGATCCACATACCACAGCAAAATGATTTGAGCCAGCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338602.6
3UTR TCA 72 bp TTGGCTTATAAAACACATAAATTTAGAGCTGCCTGGTaGAATGGTGGGCTGGGCGGGAAGTCTGAATTTTCC +
Preference number: 3 (lower is better)
Translates to: LAYKTHKFRAAW*NGGLGGKSEFS
Trigger: GGAAAATTCAGACTTCCCGCCCAGCCCACCATTTCACCAGGCAGCTCTAAATTTATGTGTTTTATAAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CCA 90 bp GGTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACACCACCTTCACGGAGATaGCGGCCCCAGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GGDRWFPGENSPQKRRSTPPSRR*RPQCWL
Trigger: CAGCCAGCACTGGGGCCGCCATCTCCGTGAAGGTGG...TGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR GCA 90 bp GGTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAGCGAAGGACACCAGTTaGTCAGGCCGCTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GGDRWFPGENSPQKRRSTAKDTS*SGRWEV
Trigger: CACCTCCCAGCGGCCTGAGCAACTGGTGTCCTTCGC...TGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp AGGGAAGGTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAGCTCTCAGGGCTGGCTaGAGGTTCCTCCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: REGGDRWFPGENSPQKRRALRAG*RFLHLE
Trigger: CTCCAGATGGAGGAACCTGCAGCCAGCCCTGAGAGC...TCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCACCTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp GTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAAAGGCAGAGAGCCCAGTaGAGAGCAGGCCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: VGTDGSRGRTALRSAEAQRQRAQ*RAGLCR
Trigger: TCGGCACAGGCCTGCTCTGCACTGGGCTCTCTGCCT...TTGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp AGGGAAGGTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGGCACCCAGCAGGCTaGCAGCAATGGTGGCGTAAC +
Preference number: 4 (lower is better)
Translates to: REGGDRWFPGENSPQKRRRHPAG*QQWWRN
Trigger: GTTACGCCACCATTGCTGGCAGCCTGCTGGGTGCCT...TCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCACCTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAACCACTCCTCGGCCCCTaGCAGGCGGCGTTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEEPLLGP*QAALLV
Trigger: TACAAGCAACGCCGCCTGGCAGGGGCCGAGGAGTGG...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CCA 90 bp GTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAACGTTTCAGCAGGCGGTaGCCCAGGAAGGTGAGGACC +
Preference number: 4 (lower is better)
Translates to: VGTDGSRGRTALRSAEAQRFSRR*PRKVRT
Trigger: GGTCCTCACCTTCCTGGGCCACCGCCTGCTGAAACG...TTGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCAGAGAGCCCAGTaGAGAGCAGGCCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEERQRAQ*RAGLCR
Trigger: TCGGCACAGGCCTGCTCTGCACTGGGCTCTCTGCCT...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp GGTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAAGGAAGATCCGGATCTaGTCGCCCAGCCACTCGAAC +
Preference number: 4 (lower is better)
Translates to: GGDRWFPGENSPQKRRSTRKIRI*SPSHSN
Trigger: GTTCGAGTGGCTGGGCGAGCAGATCCGGATCTTCCT...TGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp GGTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAGGCCCCAGTGCTGGCTaGTTCTATGAGGTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GGDRWFPGENSPQKRRSTGPSAG*FYEVLS
Trigger: GCTCAGAACCTCATAGAAGCAGCCAGCACTGGGGCC...TGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR GCA 90 bp GTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAACTGACGGAGATCCACTaGTTCCTGTCGCCGACCCAC +
Preference number: 4 (lower is better)
Translates to: VGTDGSRGRTALRSAEAQLTEIH*FLSPTH
Trigger: GTGGGTCGGCGACAGGAAGCAGTGGATCTCCGTCAG...TTGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CCA 90 bp GGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAAGCATGTTCTGTCGCAGGTTCCTCCATCTaGAGAAGGGCTTCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GSRGRTALRSAEAQACSVAGSSI*RRASAP
Trigger: CGGCGCCGAAGCCCTTCTCCAGATGGAGGAACCTGC...GACAGAACATGCTTGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp ATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGCGTTTCAGCAGGCGGTaGCCCAGGAAGGTGAGGACC +
Preference number: 4 (lower is better)
Translates to: MEPSERLPGQCAMGPQFGRFSRR*PRKVRT
Trigger: GGTCCTCACCTTCCTGGGCCACCGCCTGCTGAAACG...CCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp GTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCCCACCTTCACGGAGATaGCGGCCCCAGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VPWDLSLGSTLRKGGKGFPPSRR*RPQCWL
Trigger: CAGCCAGCACTGGGGCCGCCATCTCCGTGAAGGTGG...GAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CCA 90 bp AGGGAAGGTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAGGTTGGCAGCGATGTTaGCGACCACCTTCACGGAGA +
Preference number: 4 (lower is better)
Translates to: REGGDRWFPGENSPQKRRGWQRC*RPPSRR
Trigger: TCTCCGTGAAGGTGGTCGCCAACATCGCTGCCAACC...TCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCACCTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CCA 90 bp GGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAAGCATGTTCTGTCCAGCTCAGCTACCACTaGGCAGTCCTCCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: GSRGRTALRSAEAQACSVQLSYH*AVLPRH
Trigger: GTGGCGTGGGAGGACTGCCCAGTGGTAGCTGAGCTG...GACAGAACATGCTTGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CCA 90 bp GGTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACATCTGGATTGACGCTCTaGAAGGCCTCACGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GGDRWFPGENSPQKRRSTSGLTL*KASRQH
Trigger: GTGCTGCCGTGAGGCCTTCCAGAGCGTCAATCCAGA...TGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp CTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGCTCCAGCTGCTCCTaGTCTCTGCGGGGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: LPGQCAMGPQFGKHSEERRSSCS*SLRGSS
Trigger: ACTTGAGCCCCGCAGAGATCAGGAGCAGCTGGAGCG...CCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp GTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCAGGCGGGGATGGCCCTaGGGCTTGAGAAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: VPWDLSLGSTLRKGGKGFRRGWP*GLRNLL
Trigger: GAGGAGGTTTCTCAAGCCTCAGGGCCATCCCCGCCT...GAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp TCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGACACACAGGCTCCCGTaGAGAGCGCCCGGAGCACTA +
Preference number: 4 (lower is better)
Translates to: SWNPLNASQDSVPWDLSLTHRLP*RAPGAL
Trigger: TAGTGCTCCGGGCGCTCTTCACGGGAGCCTGTGTGT...CAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp GTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAAGCTGCTCCTGATCTCTaGGGGGCTCAAGTCACTCCT +
Preference number: 4 (lower is better)
Translates to: VGTDGSRGRTALRSAEAQAAPDL*GAQVTP
Trigger: AGGAGTGACTTGAGCCCCGCAGAGATCAGGAGCAGC...TTGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp AGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTAGGCAGAGAGCCCAGTaGAGAGCAGGCCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: SVPWDLSLGSTLRKGGKGRQRAQ*RAGLCR
Trigger: TCGGCACAGGCCTGCTCTGCACTGGGCTCTCTGCCT...ACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp GTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCGCGAAGGACACCAGTTaGTCAGGCCGCTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VPWDLSLGSTLRKGGKGFAKDTS*SGRWEV
Trigger: CACCTCCCAGCGGCCTGAGCAACTGGTGTCCTTCGC...GAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp GGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAAGCATGTTCTGTCTCCGTTGGGGGACCATaGAGGTCAAGCCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GSRGRTALRSAEAQACSVSVGGP*RSSLPA
Trigger: TGCTGGGAGGCTTGACCTCCATGGTCCCCCAACGGA...GACAGAACATGCTTGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp GGTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAAAGTCGCTCTTCCGTTaGGGGACCATGGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: GGDRWFPGENSPQKRRSTKSLFR*GTMEVK
Trigger: CTTGACCTCCATGGTCCCCCAACGGAAGAGCGACTT...TGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp GGTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACACAGGACACTGCGCAATaGTGCTTTGAGCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GGDRWFPGENSPQKRRSTQDTAQ*CFEQAK
Trigger: CTTTGCCTGCTCAAAGCATCATTGCGCAGTGTCCTG...TGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp AGGGAAGGTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGATGCACACTCACTCCATaGACCCTTCCCAATTGTGGG +
Preference number: 4 (lower is better)
Translates to: REGGDRWFPGENSPQKRRCTLTP*TLPNCG
Trigger: CCCACAATTGGGAAGGGTTCATGGAGTGAGTGTGCA...TCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCACCTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp GTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCCCGGGTAGACCAGCTTaGAGAGGGCCAAGGCACAAG +
Preference number: 4 (lower is better)
Translates to: VPWDLSLGSTLRKGGKGFPGRPA*RGPRHK
Trigger: CTTGTGCCTTGGCCCTCTCCAAGCTGGTCTACCCGG...GAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CCA 90 bp ATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGGGTTGGCAGCGATGTTaGCGACCACCTTCACGGAGA +
Preference number: 4 (lower is better)
Translates to: MEPSERLPGQCAMGPQFGGWQRC*RPPSRR
Trigger: TCTCCGTGAAGGTGGTCGCCAACATCGCTGCCAACC...CCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CCA 90 bp TCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGTCCGTTGGGGGACCATaGAGGTCAAGCCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SWNPLNASQDSVPWDLSLSVGGP*RSSLPA
Trigger: TGCTGGGAGGCTTGACCTCCATGGTCCCCCAACGGA...CAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp GTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCTCCGTTGGGGGACCATaGAGGTCAAGCCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VPWDLSLGSTLRKGGKGFSVGGP*RSSLPA
Trigger: TGCTGGGAGGCTTGACCTCCATGGTCCCCCAACGGA...GAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp AACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGGAGCAGGAAGGGGGATaGAGTGGGACATGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: NASQDSVPWDLSLGSTLREQEGG*SGTCPS
Trigger: GGAAGGACATGTCCCACTCCATCCCCCTTCCTGCTC...CCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp GGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAAGCATGTTCTGTCGAGGGGAGGAGGCTTTaGTGTGCAGCCCACAACAGA +
Preference number: 4 (lower is better)
Translates to: GSRGRTALRSAEAQACSVEGRRL*CAAHNR
Trigger: TCTGTTGTGGGCTGCACACCAAAGCCTCCTCCCCTC...GACAGAACATGCTTGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp ATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGCCTTGGCCACAGGTGTaGGAGAGATGGACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: MEPSERLPGQCAMGPQFGPWPQV*ERWTLF
Trigger: GAAGAGAGTCCATCTCTCTCACACCTGTGGCCAAGG...CCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp GGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAAGCATGTTCTGTCCCTTGGCCACAGGTGTaGGAGAGATGGACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GSRGRTALRSAEAQACSVPWPQV*ERWTLF
Trigger: GAAGAGAGTCCATCTCTCTCACACCTGTGGCCAAGG...GACAGAACATGCTTGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp GGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAAGCATGTTCTGTCCAAAGCTACTGCTGCTaGGGGTCGTGTTCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: GSRGRTALRSAEAQACSVQSYCC*GSCSRG
Trigger: CCCTCTTGAACACGACCCTCAGCAGCAGTAGCTTTG...GACAGAACATGCTTGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp AACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGCAAAGCTACTGCTGCTaGGGGTCGTGTTCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: NASQDSVPWDLSLGSTLRQSYCC*GSCSRG
Trigger: CCCTCTTGAACACGACCCTCAGCAGCAGTAGCTTTG...CCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp AACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGTGCAGAGCAGGCCTGTaGCGATCCATCGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: NASQDSVPWDLSLGSTLRCRAGL*RSIETA
Trigger: AGCTGTTTCGATGGATCGGCACAGGCCTGCTCTGCA...CCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp GTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAAAGAGAGTGTCATGTCTaGCAAGTAGGGCCGGATCAG +
Preference number: 4 (lower is better)
Translates to: VGTDGSRGRTALRSAEAQRECHV*QVGPDQ
Trigger: CTGATCCGGCCCTACTTGGCAGACATGACACTCTCT...TTGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp ATCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTAGGCACCCAGCAGGCTaGCAGCAATGGTGGCGTAAC +
Preference number: 4 (lower is better)
Translates to: IMEPSERLPGQCAMGPQFRHPAG*QQWWRN
Trigger: GTTACGCCACCATTGCTGGCAGCCTGCTGGGTGCCT...AAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp CCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCTCTAGGCACCCAGCAGGCTaGCAGCAATGGTGGCGTAAC +
Preference number: 4 (lower is better)
Translates to: PWDLSLGSTLRKGGKGFSRHPAG*QQWWRN
Trigger: GTTACGCCACCATTGCTGGCAGCCTGCTGGGTGCCT...AGAGAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp GTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAAAGCCATCACAGAGGCTaGAATCAACGAGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: VGTDGSRGRTALRSAEAQSHHRG*NQRGGI
Trigger: GATGCCACCTCGTTGATTGCAGCCTCTGTGATGGCT...TTGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR GCA 90 bp GTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCCCTCCCAGGACAGTGTaGCATGGGACCTCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: VPWDLSLGSTLRKGGKGFPPRTV*HGTSVW
Trigger: CCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGG...GAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAAGCTGGGTCCAACCTaGTTTGGCTCTGGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEEKLGPT*FGSGLP
Trigger: AGGCAAGCCAGAGCCAAAGCAGGTTGGACCCAGCTT...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394573.6
CDS-3UTR CCA 90 bp TCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGTCACTCCTAGGGAGCTaGCCTTCCTCCAGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SWNPLNASQDSVPWDLSLSLLGS*PSSRLS
Trigger: GGAAAGCCTGGAGGAAGGCCAGCTCCCTAGGAGTGA...CAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp GAAGTGACCCTGAGAATTCACACTGGGGGAGTTAGGAAATGGGGGAGCAGGAAGCGTTTCAGCAGGCGGTaGCCCAGGAAGGTGAGGACC +
Preference number: 4 (lower is better)
Translates to: EVTLRIHTGGVRKWGSRKRFSRR*PRKVRT
Trigger: GGTCCTCACCTTCCTGGGCCACCGCCTGCTGAAACG...CTTCCTGCTCCCCCATTTCCTAACTCCCCCAGTGTGAATTCTCAGGGTCACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp ATCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTAGTTGCTCAGGCCGCTaGGAGGTGTCCAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: IMEPSERLPGQCAMGPQFSCSGR*EVSRDS
Trigger: GCTGTCTCTGGACACCTCCCAGCGGCCTGAGCAACT...AAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp TGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTAGTTGCTCAGGCCGCTaGGAGGTGTCCAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: CAMGPQFGKHSEERREGFSCSGR*EVSRDS
Trigger: GCTGTCTCTGGACACCTCCCAGCGGCCTGAGCAACT...AAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp GTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCCCCCAAACACGAAGCTaGAGCCAGCCTTCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: VPWDLSLGSTLRKGGKGFPQTRS*SQPSCS
Trigger: GCTACACGAAGGCTGGCTCCAGCTTCGTGTTTGGGG...GAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp ATCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGCAGGCTGCCAGCAATaGTGGCGTAACCTCCGGTCA +
Preference number: 4 (lower is better)
Translates to: IMEPSERLPGQCAMGPQFAGCQQ*WRNLRS
Trigger: TGACCGGAGGTTACGCCACCATTGCTGGCAGCCTGC...AAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp TGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCCGGGTAGACCAGCTTaGAGAGGGCCAAGGCACAAG +
Preference number: 4 (lower is better)
Translates to: CAMGPQFGKHSEERREGFPGRPA*RGPRHK
Trigger: CTTGTGCCTTGGCCCTCTCCAAGCTGGTCTACCCGG...AAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CCA 90 bp GGTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAGGCGTTGCTTGTACTTaGAGAGGTCTTGATAGGCCA +
Preference number: 4 (lower is better)
Translates to: GGDRWFPGENSPQKRRSTGVACT*RGLDRP
Trigger: TGGCCTATCAAGACCTCTCCAAGTACAAGCAACGCC...TGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CCA 90 bp GTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCTCTGGATTGACGCTCTaGAAGGCCTCACGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VPWDLSLGSTLRKGGKGFSGLTL*KASRQH
Trigger: GTGCTGCCGTGAGGCCTTCCAGAGCGTCAATCCAGA...GAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp CTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGTCTGGATTGACGCTCTaGAAGGCCTCACGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LPGQCAMGPQFGKHSEERSGLTL*KASRQH
Trigger: GTGCTGCCGTGAGGCCTTCCAGAGCGTCAATCCAGA...CCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp GTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCGAGCAGGAAGGGGGATaGAGTGGGACATGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VPWDLSLGSTLRKGGKGFEQEGG*SGTCPS
Trigger: GGAAGGACATGTCCCACTCCATCCCCCTTCCTGCTC...GAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
3UTR CAA 72 bp AACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTaGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: NASQDSVPWDLS*GSTLRKGGKGF
Trigger: GAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp GAGCTGCCTGGTGAAATGGTGGGCTGGGCGGGAAGTCTGAATTTTCCCTCCACACCTTGGCCACAGGTGTaGGAGAGATGGACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ELPGEMVGWAGSLNFPSTPWPQV*ERWTLF
Trigger: GAAGAGAGTCCATCTCTCTCACACCTGTGGCCAAGG...TGTGGAGGGAAAATTCAGACTTCCCGCCCAGCCCACCATTTCACCAGGCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR TCA 90 bp GTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTGTGGGATAGGCGGGGATGGCCCTaGGGCTTGAGAAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: VLTHSLHTHSMNPSQLWDRRGWP*GLRNLL
Trigger: GAGGAGGTTTCTCAAGCCTCAGGGCCATCCCCGCCT...ATCCCACAATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAACAGGACACTGCGCAATaGTGCTTTGAGCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEEQDTAQ*CFEQAK
Trigger: CTTTGCCTGCTCAAAGCATCATTGCGCAGTGTCCTG...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp ATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGCGTAACCTCCGGTCATaGCAACGTGGACTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: MEPSERLPGQCAMGPQFGRNLRS*QRGLQR
Trigger: TCTCTGAAGTCCACGTTGTCATGACCGGAGGTTACG...CCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAACGTTCAGAAACAGCTTaGTCCCCAGCAGCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEERSETA*SPAAQL
Trigger: TAGCTGAGCTGCTGGGGATCAAGCTGTTTCTGAACG...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR TCA 90 bp AGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTCAAAGCTACTGCTGCTaGGGGTCGTGTTCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SVPWDLSLGSTLRKGGKGQSYCC*GSCSRG
Trigger: CCCTCTTGAACACGACCCTCAGCAGCAGTAGCTTTG...ACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp ATCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGCTGCTCCTGATCTCTaGGGGGCTCAAGTCACTCCT +
Preference number: 4 (lower is better)
Translates to: IMEPSERLPGQCAMGPQFAAPDL*GAQVTP
Trigger: AGGAGTGACTTGAGCCCCGCAGAGATCAGGAGCAGC...AAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp GGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAAGCATGTTCTGTCGAACACGCAGATTCCTaGGAAGGACACCAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GSRGRTALRSAEAQACSVEHADS*EGHQLL
Trigger: GAGCAACTGGTGTCCTTCGCAGGAATCTGCGTGTTC...GACAGAACATGCTTGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp TGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCCTGCCAGGCGGCGTTaGTTGTACTTGGAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: CAMGPQFGKHSEERREGFPARRR*LYLERS
Trigger: AGACCTCTCCAAGTACAAGCAACGCCGCCTGGCAGG...AAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR GCA 90 bp ATCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTCCTGCCAGGCGGCGTTaGTTGTACTTGGAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: IMEPSERLPGQCAMGPQFPARRR*LYLERS
Trigger: AGACCTCTCCAAGTACAAGCAACGCCGCCTGGCAGG...AAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR GCA 90 bp CTTCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAACCACTCCTCGGCCCCTaGCAGGCGGCGTTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: LPYVLTHSLHTHSMNPSQPLLGP*QAALLV
Trigger: TACAAGCAACGCCGCCTGGCAGGGGCCGAGGAGTGG...TTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR GCA 90 bp GAGCTGCCTGGTGAAATGGTGGGCTGGGCGGGAAGTCTGAATTTTCCCTCCACAAAGCTGGGTCCAACCTaGTTTGGCTCTGGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: ELPGEMVGWAGSLNFPSTKLGPT*FGSGLP
Trigger: AGGCAAGCCAGAGCCAAAGCAGGTTGGACCCAGCTT...TGTGGAGGGAAAATTCAGACTTCCCGCCCAGCCCACCATTTCACCAGGCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CCA 90 bp TGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTTCACTCCTAGGGAGCTaGCCTTCCTCCAGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: CAMGPQFGKHSEERREGFSLLGS*PSSRLS
Trigger: GGAAAGCCTGGAGGAAGGCCAGCTCCCTAGGAGTGA...AAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp ACCCTTCCCAATTGTGGGATTGAGCTGGGTCTAAGTCCTGTGGCTTCCCTGAAGAGTTGCTCAGGCCGCTaGGAGGTGTCCAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: TLPNCGIELGLSPVASLKSCSGR*EVSRDS
Trigger: GCTGTCTCTGGACACCTCCCAGCGGCCTGAGCAACT...CTTCAGGGAAGCCACAGGACTTAGACCCAGCTCAATCCCACAATTGGGAAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp TGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCCCCAAACACGAAGCTaGAGCCAGCCTTCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: CAMGPQFGKHSEERREGFPQTRS*SQPSCS
Trigger: GCTACACGAAGGCTGGCTCCAGCTTCGTGTTTGGGG...AAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp ATCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTCCCCAAACACGAAGCTaGAGCCAGCCTTCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: IMEPSERLPGQCAMGPQFPQTRS*SQPSCS
Trigger: GCTACACGAAGGCTGGCTCCAGCTTCGTGTTTGGGG...AAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp CTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGAAGTCGCTCTTCCGTTaGGGGACCATGGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: LPGQCAMGPQFGKHSEERKSLFR*GTMEVK
Trigger: CTTGACCTCCATGGTCCCCCAACGGAAGAGCGACTT...CCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp TGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTGCCCGGAGCACTATCTaGGAGAAGTCGCTCTTCCGT +
Preference number: 4 (lower is better)
Translates to: CAMGPQFGKHSEERREGFARSTI*EKSLFR
Trigger: ACGGAAGAGCGACTTCTCCCAGATAGTGCTCCGGGC...AAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp AGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTGTTGTCCAGGGCCTCTaGGCTGAACTCTGGATTGAC +
Preference number: 4 (lower is better)
Translates to: SVPWDLSLGSTLRKGGKGVVQGL*AELWID
Trigger: GTCAATCCAGAGTTCAGCCCAGAGGCCCTGGACAAC...ACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp GTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCGTTGTCCAGGGCCTCTaGGCTGAACTCTGGATTGAC +
Preference number: 4 (lower is better)
Translates to: VPWDLSLGSTLRKGGKGFVVQGL*AELWID
Trigger: GTCAATCCAGAGTTCAGCCCAGAGGCCCTGGACAAC...GAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAGGAAGGGGGATGGAGTaGGACATGTCCTTCCTTATG +
Preference number: 4 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEEGRGME*DMSFLM
Trigger: CATAAGGAAGGACATGTCCCACTCCATCCCCCTTCC...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp TGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTGAGCAGGAAGGGGGATaGAGTGGGACATGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: CAMGPQFGKHSEERREGFEQEGG*SGTCPS
Trigger: GGAAGGACATGTCCCACTCCATCCCCCTTCCTGCTC...AAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp CCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCTCTGAGGGGAGGAGGCTTTaGTGTGCAGCCCACAACAGA +
Preference number: 4 (lower is better)
Translates to: PWDLSLGSTLRKGGKGFSEGRRL*CAAHNR
Trigger: TCTGTTGTGGGCTGCACACCAAAGCCTCCTCCCCTC...AGAGAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp GTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCCAGGACAGTGTGCCATaGGACCTCAGTTTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VPWDLSLGSTLRKGGKGFQDSVP*DLSLGS
Trigger: GCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTG...GAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp CTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGGGGTCCAACCTGCTTTaGCTCTGGCTTGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LPGQCAMGPQFGKHSEERGSNLL*LWLALS
Trigger: TGACAAGGCAAGCCAGAGCCAAAGCAGGTTGGACCC...CCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394573.6
CDS-3UTR CCA 90 bp TCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGTCTGTGGGGACAAGCTaGGTCCAACCTGCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: SWNPLNASQDSVPWDLSLSVGTS*VQPALA
Trigger: AGCCAAAGCAGGTTGGACCCAGCTTGTCCCCACAGA...CAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394573.6
CDS-3UTR CCA 90 bp AATGGTGGGCTGGGCGGGAAGTCTGAATTTTCCCTCCACAACCTCCCTCTCCTGAAGCACACGTCTCTGTaGGGACAAGCTGGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: NGGLGGKSEFSLHNLPLLKHTSL*GQAGSN
Trigger: GTTGGACCCAGCTTGTCCCCACAGAGACGTGTGCTT...CAGGAGAGGGAGGTTGTGGAGGGAAAATTCAGACTTCCCGCCCAGCCCACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR TCA 90 bp ACCCTTCCCAATTGTGGGATTGAGCTGGGTCTAAGTCCTGTGGCTTCCCTGAAGGGATCACCCACTGCATaGGGCCCACGTGGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: TLPNCGIELGLSPVASLKGSPTA*GPRGRE
Trigger: TTCTCTACCACGTGGGCCTCATGCAGTGGGTGATCC...CTTCAGGGAAGCCACAGGACTTAGACCCAGCTCAATCCCACAATTGGGAAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAATCCCAATTGTGGGATTaGGCTGGGTCTAAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEESQLWD*AGSKSC
Trigger: ACAGGACTTAGACCCAGCTCAATCCCACAATTGGGA...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp TCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGTGCACACTCACTCCATaGACCCTTCCCAATTGTGGG +
Preference number: 4 (lower is better)
Translates to: SWNPLNASQDSVPWDLSLCTLTP*TLPNCG
Trigger: CCCACAATTGGGAAGGGTTCATGGAGTGAGTGTGCA...CAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp CCCCTGCATCCCCCTGACTTAGTCTTTGGGTATCTTTGGTCACCAGCTTCTTCATTTAGAGCTGCCTGGTaGAATGGTGGGCTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: PLHPPDLVFGYLWSPASSFRAAW*NGGLGG
Trigger: CCCGCCCAGCCCACCATTTCACCAGGCAGCTCTAAA...TGAAGAAGCTGGTGACCAAAGATACCCAAAGACTAAGTCAGGGGGATGCAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR GCA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAATCCATCGAAACAGCTaGATGTGCTCCCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEEIHRNS*MCSLQK
Trigger: CTTCTGCAGGGAGCACATGCAGCTGTTTCGATGGAT...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp CCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCTCTTGCAGAGCAGGCCTGTaGCGATCCATCGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: PWDLSLGSTLRKGGKGFSCRAGL*RSIETA
Trigger: AGCTGTTTCGATGGATCGGCACAGGCCTGCTCTGCA...AGAGAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp GTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAAAGTCCAAGTACAAACTaGAGTCCAAGTCCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: VGTDGSRGRTALRSAEAQSPSTN*SPSPQD
Trigger: GTCTTGGGGACTTGGACTGCAGTTTGTACTTGGACT...TTGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp GAAGTGACCCTGAGAATTCACACTGGGGGAGTTAGGAAATGGGGGAGCAGGAAGAGGAAGATCCGGATCTaGTCGCCCAGCCACTCGAAC +
Preference number: 4 (lower is better)
Translates to: EVTLRIHTGGVRKWGSRKRKIRI*SPSHSN
Trigger: GTTCGAGTGGCTGGGCGAGCAGATCCGGATCTTCCT...CTTCCTGCTCCCCCATTTCCTAACTCCCCCAGTGTGAATTCTCAGGGTCACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp TCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGAGAGAGTGTCATGTCTaGCAAGTAGGGCCGGATCAG +
Preference number: 4 (lower is better)
Translates to: SWNPLNASQDSVPWDLSLRECHV*QVGPDQ
Trigger: CTGATCCGGCCCTACTTGGCAGACATGACACTCTCT...CAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp ACCCTTCCCAATTGTGGGATTGAGCTGGGTCTAAGTCCTGTGGCTTCCCTGAAGGGCCCCAGTGCTGGCTaGTTCTATGAGGTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: TLPNCGIELGLSPVASLKGPSAG*FYEVLS
Trigger: GCTCAGAACCTCATAGAAGCAGCCAGCACTGGGGCC...CTTCAGGGAAGCCACAGGACTTAGACCCAGCTCAATCCCACAATTGGGAAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR GCA 90 bp ATCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGAGGAGGCTTTGGTGTaGAGCCCACAACAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: IMEPSERLPGQCAMGPQFEEALV*SPQQKG
Trigger: TCCCTTCTGTTGTGGGCTGCACACCAAAGCCTCCTC...AAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAACTGCAATCAACGAGGTaGCATCGATCCCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEELQSTR*HRSQRR
Trigger: TCTCCTTTGGGATCGATGCCACCTCGTTGATTGCAG...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CCA 90 bp CTTCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAACAGCTCAGCTACCACTaGGCAGTCCTCCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: LPYVLTHSLHTHSMNPSQQLSYH*AVLPRH
Trigger: GTGGCGTGGGAGGACTGCCCAGTGGTAGCTGAGCTG...TTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CCA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAGGCGTTGCTTGTACTTaGAGAGGTCTTGATAGGCCA +
Preference number: 4 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEEGVACT*RGLDRP
Trigger: TGGCCTATCAAGACCTCTCCAAGTACAAGCAACGCC...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CCA 90 bp TGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTAAGTCGCTCTTCCGTTaGGGGACCATGGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: CAMGPQFGKHSEERREGFKSLFR*GTMEVK
Trigger: CTTGACCTCCATGGTCCCCCAACGGAAGAGCGACTT...AAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp AGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTGGAAGGGGGATGGAGTaGGACATGTCCTTCCTTATG +
Preference number: 4 (lower is better)
Translates to: SVPWDLSLGSTLRKGGKGGRGME*DMSFLM
Trigger: CATAAGGAAGGACATGTCCCACTCCATCCCCCTTCC...ACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAAACCTAGTCCATCATaGAACCCTCTGAACGCCTCC +
Preference number: 4 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEEKPSPS*NPLNAS
Trigger: GGAGGCGTTCAGAGGGTTCCATGATGGACTAGGTTT...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp AACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAACCTAGTCCATCATaGAACCCTCTGAACGCCTCC +
Preference number: 4 (lower is better)
Translates to: NASQDSVPWDLSLGSTLRKPSPS*NPLNAS
Trigger: GGAGGCGTTCAGAGGGTTCCATGATGGACTAGGTTT...CCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp TCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTAGGCGGGGATGGCCCTaGGGCTTGAGAAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLCPHSLSAHSLHEPFPIRRGWP*GLRNLL
Trigger: GAGGAGGTTTCTCAAGCCTCAGGGCCATCCCCGCCT...AATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp AACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGATGATGGGCAGAACCTaGAAGGCAAAGACATCCTTG +
Preference number: 4 (lower is better)
Translates to: NASQDSVPWDLSLGSTLRMMGRT*KAKTSL
Trigger: CAAGGATGTCTTTGCCTTTCAGGTTCTGCCCATCAT...CCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAATGATGGGCAGAACCTaGAAGGCAAAGACATCCTTG +
Preference number: 4 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEEMMGRT*KAKTSL
Trigger: CAAGGATGTCTTTGCCTTTCAGGTTCTGCCCATCAT...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp ATCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTCGTAACCTCCGGTCATaGCAACGTGGACTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: IMEPSERLPGQCAMGPQFRNLRS*QRGLQR
Trigger: TCTCTGAAGTCCACGTTGTCATGACCGGAGGTTACG...AAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp GTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCTGCTGGCTGCTTCTATaGGGTTCTGAGCATCTCCAT +
Preference number: 4 (lower is better)
Translates to: VPWDLSLGSTLRKGGKGFCWLLL*GSEHLH
Trigger: ATGGAGATGCTCAGAACCTCATAGAAGCAGCCAGCA...GAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR TCA 90 bp CCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCTCTCGTTCAGAAACAGCTTaGTCCCCAGCAGCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: PWDLSLGSTLRKGGKGFSRSETA*SPAAQL
Trigger: TAGCTGAGCTGCTGGGGATCAAGCTGTTTCTGAACG...AGAGAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR TCA 90 bp TCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTACACACAGGCTCCCGTaGAGAGCGCCCGGAGCACTA +
Preference number: 4 (lower is better)
Translates to: SLCPHSLSAHSLHEPFPITHRLP*RAPGAL
Trigger: TAGTGCTCCGGGCGCTCTTCACGGGAGCCTGTGTGT...AATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp AGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTCCCAATTGTGGGATTaGGCTGGGTCTAAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: SVPWDLSLGSTLRKGGKGSQLWD*AGSKSC
Trigger: ACAGGACTTAGACCCAGCTCAATCCCACAATTGGGA...ACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp TCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGATCCATCGAAACAGCTaGATGTGCTCCCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SWNPLNASQDSVPWDLSLIHRNS*MCSLQK
Trigger: CTTCTGCAGGGAGCACATGCAGCTGTTTCGATGGAT...CAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp AATGGTGGGCTGGGCGGGAAGTCTGAATTTTCCCTCCACAACCTCCCTCTCCTGATCCATCGAAACAGCTaGATGTGCTCCCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: NGGLGGKSEFSLHNLPLLIHRNS*MCSLQK
Trigger: CTTCTGCAGGGAGCACATGCAGCTGTTTCGATGGAT...CAGGAGAGGGAGGTTGTGGAGGGAAAATTCAGACTTCCCGCCCAGCCCACCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR GCA 90 bp GTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCATCCATCGAAACAGCTaGATGTGCTCCCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VPWDLSLGSTLRKGGKGFIHRNS*MCSLQK
Trigger: CTTCTGCAGGGAGCACATGCAGCTGTTTCGATGGAT...GAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp GAAGTGACCCTGAGAATTCACACTGGGGGAGTTAGGAAATGGGGGAGCAGGAAGTGCAGAGCAGGCCTGTaGCGATCCATCGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: EVTLRIHTGGVRKWGSRKCRAGL*RSIETA
Trigger: AGCTGTTTCGATGGATCGGCACAGGCCTGCTCTGCA...CTTCCTGCTCCCCCATTTCCTAACTCCCCCAGTGTGAATTCTCAGGGTCACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp TCCAGTTTGAAAAGCAGCAGATCTCAAACTGTTGTCCAAGGACGCTGCTGGCTAAGGCAGAGAGCCCAGTaGAGAGCAGGCCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: SSLKSSRSQTVVQGRCWLRQRAQ*RAGLCR
Trigger: TCGGCACAGGCCTGCTCTGCACTGGGCTCTCTGCCT...TAGCCAGCAGCGTCCTTGGACAACAGTTTGAGATCTGCTGCTTTTCAAACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR GCA 90 bp TCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTGCGAAGGACACCAGTTaGTCAGGCCGCTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SLCPHSLSAHSLHEPFPIAKDTS*SGRWEV
Trigger: CACCTCCCAGCGGCCTGAGCAACTGGTGTCCTTCGC...AATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp CTTCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAACTGACGGAGATCCACTaGTTCCTGTCGCCGACCCAC +
Preference number: 4 (lower is better)
Translates to: LPYVLTHSLHTHSMNPSQLTEIH*FLSPTH
Trigger: GTGGGTCGGCGACAGGAAGCAGTGGATCTCCGTCAG...TTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR GCA 90 bp GAAGTGACCCTGAGAATTCACACTGGGGGAGTTAGGAAATGGGGGAGCAGGAAGGAGGAGGCTTTGGTGTaGAGCCCACAACAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: EVTLRIHTGGVRKWGSRKEEALV*SPQQKG
Trigger: TCCCTTCTGTTGTGGGCTGCACACCAAAGCCTCCTC...CTTCCTGCTCCCCCATTTCCTAACTCCCCCAGTGTGAATTCTCAGGGTCACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp ACCCTTCCCAATTGTGGGATTGAGCTGGGTCTAAGTCCTGTGGCTTCCCTGAAGGAGGAGGCTTTGGTGTaGAGCCCACAACAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: TLPNCGIELGLSPVASLKEEALV*SPQQKG
Trigger: TCCCTTCTGTTGTGGGCTGCACACCAAAGCCTCCTC...CTTCAGGGAAGCCACAGGACTTAGACCCAGCTCAATCCCACAATTGGGAAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp CTTCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAAGCAGGCTGCCAGCAATaGTGGCGTAACCTCCGGTCA +
Preference number: 4 (lower is better)
Translates to: LPYVLTHSLHTHSMNPSQAGCQQ*WRNLRS
Trigger: TGACCGGAGGTTACGCCACCATTGCTGGCAGCCTGC...TTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp GTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTGTGGGATGCCCGGAGCACTATCTaGGAGAAGTCGCTCTTCCGT +
Preference number: 4 (lower is better)
Translates to: VLTHSLHTHSMNPSQLWDARSTI*EKSLFR
Trigger: ACGGAAGAGCGACTTCTCCCAGATAGTGCTCCGGGC...ATCCCACAATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp ACCCTTCCCAATTGTGGGATTGAGCTGGGTCTAAGTCCTGTGGCTTCCCTGAAGCAGGACAGTGTGCCATaGGACCTCAGTTTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: TLPNCGIELGLSPVASLKQDSVP*DLSLGS
Trigger: GCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTG...CTTCAGGGAAGCCACAGGACTTAGACCCAGCTCAATCCCACAATTGGGAAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp AATGGTGGGCTGGGCGGGAAGTCTGAATTTTCCCTCCACAACCTCCCTCTCCTGATGTGGATCTCACTTTaGGAAAGTGAGAGGCACCCC +
Preference number: 4 (lower is better)
Translates to: NGGLGGKSEFSLHNLPLLMWISL*ESERHP
Trigger: GGGGTGCCTCTCACTTTCCCAAAGTGAGATCCACAT...CAGGAGAGGGAGGTTGTGGAGGGAAAATTCAGACTTCCCGCCCAGCCCACCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR TCA 90 bp GTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTGTGGGATCCTTGGCCACAGGTGTaGGAGAGATGGACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: VLTHSLHTHSMNPSQLWDPWPQV*ERWTLF
Trigger: GAAGAGAGTCCATCTCTCTCACACCTGTGGCCAAGG...ATCCCACAATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp GAAGTGACCCTGAGAATTCACACTGGGGGAGTTAGGAAATGGGGGAGCAGGAAGTGCGCAATGATGCTTTaGGCAGGCAAAGAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: EVTLRIHTGGVRKWGSRKCAMML*AGKEES
Trigger: GCTCTCCTCTTTGCCTGCTCAAAGCATCATTGCGCA...CTTCCTGCTCCCCCATTTCCTAACTCCCCCAGTGTGAATTCTCAGGGTCACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp GAAGTGACCCTGAGAATTCACACTGGGGGAGTTAGGAAATGGGGGAGCAGGAAGCGTAACCTCCGGTCATaGCAACGTGGACTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: EVTLRIHTGGVRKWGSRKRNLRS*QRGLQR
Trigger: TCTCTGAAGTCCACGTTGTCATGACCGGAGGTTACG...CTTCCTGCTCCCCCATTTCCTAACTCCCCCAGTGTGAATTCTCAGGGTCACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp ACCCTTCCCAATTGTGGGATTGAGCTGGGTCTAAGTCCTGTGGCTTCCCTGAAGGAACACGCAGATTCCTaGGAAGGACACCAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: TLPNCGIELGLSPVASLKEHADS*EGHQLL
Trigger: GAGCAACTGGTGTCCTTCGCAGGAATCTGCGTGTTC...CTTCAGGGAAGCCACAGGACTTAGACCCAGCTCAATCCCACAATTGGGAAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp CTTCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAAAGGAAGATCCGGATCTaGTCGCCCAGCCACTCGAAC +
Preference number: 4 (lower is better)
Translates to: LPYVLTHSLHTHSMNPSQRKIRI*SPSHSN
Trigger: GTTCGAGTGGCTGGGCGAGCAGATCCGGATCTTCCT...TTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp CTTCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAACCTCCCAGGACAGTGTaGCATGGGACCTCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: LPYVLTHSLHTHSMNPSQPPRTV*HGTSVW
Trigger: CCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGG...TTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp AACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGATCCAGCAGCAACCATaGAGTGCAGCTTATAACCTT +
Preference number: 4 (lower is better)
Translates to: NASQDSVPWDLSLGSTLRIQQQP*SAAYNL
Trigger: AAGGTTATAAGCTGCACTGCATGGTTGCTGCTGGAT...CCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp CTTCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATCACTCCTAGGGAGCTaGCCTTCCTCCAGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LPYVLTHSLHTHSMNPSQSLLGS*PSSRLS
Trigger: GGAAAGCCTGGAGGAAGGCCAGCTCCCTAGGAGTGA...TTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp ATCCACAGGCTGGCTCAAATCATTTTGCTGTGGTATGTGGATCTCACTTTGGGACGTTTCAGCAGGCGGTaGCCCAGGAAGGTGAGGACC +
Preference number: 4 (lower is better)
Translates to: IHRLAQIILLWYVDLTLGRFSRR*PRKVRT
Trigger: GGTCCTCACCTTCCTGGGCCACCGCCTGCTGAAACG...TCCCAAAGTGAGATCCACATACCACAGCAAAATGATTTGAGCCAGCCTGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CCA 90 bp CTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGAATGGAGCCTCGGTCTaGCTCACAAAGATGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LPGQCAMGPQFGKHSEERNGASV*LTKMFP
Trigger: TGGAAACATCTTTGTGAGCCAGACCGAGGCTCCATT...CCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp CCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCTCTCTGCAATCAACGAGGTaGCATCGATCCCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PWDLSLGSTLRKGGKGFSLQSTR*HRSQRR
Trigger: TCTCCTTTGGGATCGATGCCACCTCGTTGATTGCAG...AGAGAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CCA 90 bp GTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTGTGGGATCAGGACAGTGTGCCATaGGACCTCAGTTTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VLTHSLHTHSMNPSQLWDQDSVP*DLSLGS
Trigger: GCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTG...ATCCCACAATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp CCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCTCTAAACCTAGTCCATCATaGAACCCTCTGAACGCCTCC +
Preference number: 4 (lower is better)
Translates to: PWDLSLGSTLRKGGKGFSKPSPS*NPLNAS
Trigger: GGAGGCGTTCAGAGGGTTCCATGATGGACTAGGTTT...AGAGAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp GTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTGTGGGATTGCGCAATGATGCTTTaGGCAGGCAAAGAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VLTHSLHTHSMNPSQLWDCAMML*AGKEES
Trigger: GCTCTCCTCTTTGCCTGCTCAAAGCATCATTGCGCA...ATCCCACAATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp TCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTGGATCACCCACTGCATaGGGCCCACGTGGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: SLCPHSLSAHSLHEPFPIGSPTA*GPRGRE
Trigger: TTCTCTACCACGTGGGCCTCATGCAGTGGGTGATCC...AATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR TCA 90 bp GAAGTGACCCTGAGAATTCACACTGGGGGAGTTAGGAAATGGGGGAGCAGGAAGTGCTGGCTGCTTCTATaGGGTTCTGAGCATCTCCAT +
Preference number: 4 (lower is better)
Translates to: EVTLRIHTGGVRKWGSRKCWLLL*GSEHLH
Trigger: ATGGAGATGCTCAGAACCTCATAGAAGCAGCCAGCA...CTTCCTGCTCCCCCATTTCCTAACTCCCCCAGTGTGAATTCTCAGGGTCACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR GCA 90 bp TCCAGTTTGAAAAGCAGCAGATCTCAAACTGTTGTCCAAGGACGCTGCTGGCTAGCTGCTCCTGATCTCTaGGGGGCTCAAGTCACTCCT +
Preference number: 4 (lower is better)
Translates to: SSLKSSRSQTVVQGRCWLAAPDL*GAQVTP
Trigger: AGGAGTGACTTGAGCCCCGCAGAGATCAGGAGCAGC...TAGCCAGCAGCGTCCTTGGACAACAGTTTGAGATCTGCTGCTTTTCAAACTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR GCA 90 bp TCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTGCTGCTCCTGATCTCTaGGGGGCTCAAGTCACTCCT +
Preference number: 4 (lower is better)
Translates to: SLCPHSLSAHSLHEPFPIAAPDL*GAQVTP
Trigger: AGGAGTGACTTGAGCCCCGCAGAGATCAGGAGCAGC...AATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp GTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTGTGGGATGAACACGCAGATTCCTaGGAAGGACACCAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: VLTHSLHTHSMNPSQLWDEHADS*EGHQLL
Trigger: GAGCAACTGGTGTCCTTCGCAGGAATCTGCGTGTTC...ATCCCACAATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp GTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCATCCAGCAGCAACCATaGAGTGCAGCTTATAACCTT +
Preference number: 4 (lower is better)
Translates to: VPWDLSLGSTLRKGGKGFIQQQP*SAAYNL
Trigger: AAGGTTATAAGCTGCACTGCATGGTTGCTGCTGGAT...GAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp GAAGTGACCCTGAGAATTCACACTGGGGGAGTTAGGAAATGGGGGAGCAGGAAGGCTTTGGCTCTGGCTTaGCTTGTCACTTCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: EVTLRIHTGGVRKWGSRKALALA*LVTSAE
Trigger: TTCTGCTGAAGTGACAAGGCAAGCCAGAGCCAAAGC...CTTCCTGCTCCCCCATTTCCTAACTCCCCCAGTGTGAATTCTCAGGGTCACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394573.6
CDS-3UTR GCA 90 bp CCCCCTGACTTAGTCTTTGGGTATCTTTGGTCACCAGCTTCTTCATCAACAAAAGATTCGGGCCCTCCTTaGTCCATGGCCTGGGATCCC +
Preference number: 4 (lower is better)
Translates to: PPDLVFGYLWSPASSSTKDSGPP*SMAWDP
Trigger: GGGATCCCAGGCCATGGAGCAAGGAGGGCCCGAATC...TTTTGTTGATGAAGAAGCTGGTGACCAAAGATACCCAAAGACTAAGTCAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CCA 90 bp TGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTAATGGAGCCTCGGTCTaGCTCACAAAGATGTTTCCA +
Preference number: 4 (lower is better)
Translates to: CAMGPQFGKHSEERREGFNGASV*LTKMFP
Trigger: TGGAAACATCTTTGTGAGCCAGACCGAGGCTCCATT...AAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp GTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTGTGGGATGGAAGGGGGATGGAGTaGGACATGTCCTTCCTTATG +
Preference number: 4 (lower is better)
Translates to: VLTHSLHTHSMNPSQLWDGRGME*DMSFLM
Trigger: CATAAGGAAGGACATGTCCCACTCCATCCCCCTTCC...ATCCCACAATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp ACCCTTCCCAATTGTGGGATTGAGCTGGGTCTAAGTCCTGTGGCTTCCCTGAAGAACCTGCTTTGGCTCTaGCTTGCCTTGTCACTTCAG +
Preference number: 4 (lower is better)
Translates to: TLPNCGIELGLSPVASLKNLLWL*LALSLQ
Trigger: CTGAAGTGACAAGGCAAGCCAGAGCCAAAGCAGGTT...CTTCAGGGAAGCCACAGGACTTAGACCCAGCTCAATCCCACAATTGGGAAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394573.6
CDS-3UTR CCA 90 bp CTTCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAAAAGCACACGTCTCTGTaGGGACAAGCTGGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: LPYVLTHSLHTHSMNPSQKHTSL*GQAGSN
Trigger: GTTGGACCCAGCTTGTCCCCACAGAGACGTGTGCTT...TTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394573.6
CDS-3UTR TCA 90 bp AATGGTGGGCTGGGCGGGAAGTCTGAATTTTCCCTCCACAACCTCCCTCTCCTGCCAAGGAATCCAGTTTaGAAAGCAGCAGATCTCAAA +
Preference number: 4 (lower is better)
Translates to: NGGLGGKSEFSLHNLPLLPRNPV*KAADLK
Trigger: TTTGAGATCTGCTGCTTTTCAAACTGGATTCCTTGG...CAGGAGAGGGAGGTTGTGGAGGGAAAATTCAGACTTCCCGCCCAGCCCACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR GCA 90 bp CTTCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAAAGAGAGTGTCATGTCTaGCAAGTAGGGCCGGATCAG +
Preference number: 4 (lower is better)
Translates to: LPYVLTHSLHTHSMNPSQRECHV*QVGPDQ
Trigger: CTGATCCGGCCCTACTTGGCAGACATGACACTCTCT...TTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp GGCTGGCTCAAATCATTTTGCTGTGGTATGTGGATCTCACTTTGGGAAAGTGAGTCACTCCTAGGGAGCTaGCCTTCCTCCAGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GWLKSFCCGMWISLWESESLLGS*PSSRLS
Trigger: GGAAAGCCTGGAGGAAGGCCAGCTCCCTAGGAGTGA...CTCACTTTCCCAAAGTGAGATCCACATACCACAGCAAAATGATTTGAGCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CCA 90 bp GAAGTGACCCTGAGAATTCACACTGGGGGAGTTAGGAAATGGGGGAGCAGGAAGAATGGAGCCTCGGTCTaGCTCACAAAGATGTTTCCA +
Preference number: 4 (lower is better)
Translates to: EVTLRIHTGGVRKWGSRKNGASV*LTKMFP
Trigger: TGGAAACATCTTTGTGAGCCAGACCGAGGCTCCATT...CTTCCTGCTCCCCCATTTCCTAACTCCCCCAGTGTGAATTCTCAGGGTCACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CCA 90 bp TCCAGTTTGAAAAGCAGCAGATCTCAAACTGTTGTCCAAGGACGCTGCTGGCTAGCCCTCCTTGCTCCATaGCCTGGGATCCCTCTTAAA +
Preference number: 4 (lower is better)
Translates to: SSLKSSRSQTVVQGRCWLALLAP*PGIPLK
Trigger: TTTAAGAGGGATCCCAGGCCATGGAGCAAGGAGGGC...TAGCCAGCAGCGTCCTTGGACAACAGTTTGAGATCTGCTGCTTTTCAAACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR TCA 90 bp GTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTGTGGGATATGATGGGCAGAACCTaGAAGGCAAAGACATCCTTG +
Preference number: 4 (lower is better)
Translates to: VLTHSLHTHSMNPSQLWDMMGRT*KAKTSL
Trigger: CAAGGATGTCTTTGCCTTTCAGGTTCTGCCCATCAT...ATCCCACAATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp GTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTGTGGGATAGTCCAAGTACAAACTaGAGTCCAAGTCCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: VLTHSLHTHSMNPSQLWDSPSTN*SPSPQD
Trigger: GTCTTGGGGACTTGGACTGCAGTTTGTACTTGGACT...ATCCCACAATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR GCA 90 bp TCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTAGCCATCACAGAGGCTaGAATCAACGAGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: SLCPHSLSAHSLHEPFPISHHRG*NQRGGI
Trigger: GATGCCACCTCGTTGATTGCAGCCTCTGTGATGGCT...AATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR TCA 90 bp CACAGGCTGGCTCAAATCATTTTGCTGTGGTATGTGGATCTCACTTTGGGAAAGACCCCTGCATCCCCCTaGCTTAGTCTTTGGGTATCT +
Preference number: 4 (lower is better)
Translates to: HRLAQIILLWYVDLTLGKTPASP*LSLWVS
Trigger: AGATACCCAAAGACTAAGTCAGGGGGATGCAGGGGT...CTTTCCCAAAGTGAGATCCACATACCACAGCAAAATGATTTGAGCCAGCCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR GCA 90 bp TGTTCATCCACAGGCTGGCTCAAATCATTTTGCTGTGGTATGTGGATCTCACTTTGCAGAGCAGGCCTGTaGCGATCCATCGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: CSSTGWLKSFCCGMWISLCRAGL*RSIETA
Trigger: AGCTGTTTCGATGGATCGGCACAGGCCTGCTCTGCA...AAGTGAGATCCACATACCACAGCAAAATGATTTGAGCCAGCCTGTGGATGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CCA 90 bp TGTTCATCCACAGGCTGGCTCAAATCATTTTGCTGTGGTATGTGGATCTCACTTTCTGTGGGGACAAGCTaGGTCCAACCTGCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: CSSTGWLKSFCCGMWISLSVGTS*VQPALA
Trigger: AGCCAAAGCAGGTTGGACCCAGCTTGTCCCCACAGA...AAGTGAGATCCACATACCACAGCAAAATGATTTGAGCCAGCCTGTGGATGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR TCA 90 bp TTGTGTGAACCTTGGCTTATAAAACACATAAATTTAGAGCTGCCTGGTGAAATGAGGCGGGGATGGCCCTaGGGCTTGAGAAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: LCEPWLIKHINLELPGEMRRGWP*GLRNLL
Trigger: GAGGAGGTTTCTCAAGCCTCAGGGCCATCCCCGCCT...CATTTCACCAGGCAGCTCTAAATTTATGTGTTTTATAAGCCAAGGTTCACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR GCA 90 bp CACAGGCTGGCTCAAATCATTTTGCTGTGGTATGTGGATCTCACTTTGGGAAAGGCTTTGGCTCTGGCTTaGCTTGTCACTTCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: HRLAQIILLWYVDLTLGKALALA*LVTSAE
Trigger: TTCTGCTGAAGTGACAAGGCAAGCCAGAGCCAAAGC...CTTTCCCAAAGTGAGATCCACATACCACAGCAAAATGATTTGAGCCAGCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR GCA 90 bp AGATTTCCAGCGCTCCAAGGAATCCAGTTTGAAAAGCAGCAGATCTCAAACTGTTCCAGGGATGGTCCCTaGGGCTTTTTGTCTCACACT +
Preference number: 4 (lower is better)
Translates to: RFPALQGIQFEKQQISNCSRDGP*GFLSHT
Trigger: AGTGTGAGACAAAAAGCCGCAGGGACCATCCCTGGA...ACAGTTTGAGATCTGCTGCTTTTCAAACTGGATTCCTTGGAGCGCTGGAAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CCA 90 bp AAGGAATCCAGTTTGAAAAGCAGCAGATCTCAAACTGTTGTCCAAGGACGCTGCAACCTGCTTTGGCTCTaGCTTGCCTTGTCACTTCAG +
Preference number: 4 (lower is better)
Translates to: KESSLKSSRSQTVVQGRCNLLWL*LALSLQ
Trigger: CTGAAGTGACAAGGCAAGCCAGAGCCAAAGCAGGTT...GCAGCGTCCTTGGACAACAGTTTGAGATCTGCTGCTTTTCAAACTGGATTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CCA 90 bp AAATGTGTTCATCCACAGGCTGGCTCAAATCATTTTGCTGTGGTATGTGGATCTGGGTCCAACCTGCTTTaGCTCTGGCTTGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: KCVHPQAGSNHFAVVCGSGSNLL*LWLALS
Trigger: TGACAAGGCAAGCCAGAGCCAAAGCAGGTTGGACCC...AGATCCACATACCACAGCAAAATGATTTGAGCCAGCCTGTGGATGAACACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CCA 90 bp CCCCCTGACTTAGTCTTTGGGTATCTTTGGTCACCAGCTTCTTCATCAACAAAAGGTGAAATGGTGGGCTaGGCGGGAAGTCTGAATTTT +
Preference number: 4 (lower is better)
Translates to: PPDLVFGYLWSPASSSTKGEMVG*AGSLNF
Trigger: AAAATTCAGACTTCCCGCCCAGCCCACCATTTCACC...TTTTGTTGATGAAGAAGCTGGTGACCAAAGATACCCAAAGACTAAGTCAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR GCA 90 bp CCCCCTGACTTAGTCTTTGGGTATCTTTGGTCACCAGCTTCTTCATCAACAAAAATCCAGCAGCAACCATaGAGTGCAGCTTATAACCTT +
Preference number: 4 (lower is better)
Translates to: PPDLVFGYLWSPASSSTKIQQQP*SAAYNL
Trigger: AAGGTTATAAGCTGCACTGCATGGTTGCTGCTGGAT...TTTTGTTGATGAAGAAGCTGGTGACCAAAGATACCCAAAGACTAAGTCAGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR GCA 90 bp ATCCACAGGCTGGCTCAAATCATTTTGCTGTGGTATGTGGATCTCACTTTGGGATGGCTCAAATCATTTTaGTGTGGTATGTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: IHRLAQIILLWYVDLTLGWLKSF*CGMWIS
Trigger: TGAGATCCACATACCACAGCAAAATGATTTGAGCCA...TCCCAAAGTGAGATCCACATACCACAGCAAAATGATTTGAGCCAGCCTGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CCA 90 bp AGATTTCCAGCGCTCCAAGGAATCCAGTTTGAAAAGCAGCAGATCTCAAACTGTTACATCAGAATCCCCTaGAGGCTAATGAAAAATACC +
Preference number: 4 (lower is better)
Translates to: RFPALQGIQFEKQQISNCYIRIP*RLMKNT
Trigger: GGTATTTTTCATTAGCCTCCAGGGGATTCTGATGTA...ACAGTTTGAGATCTGCTGCTTTTCAAACTGGATTCCTTGGAGCGCTGGAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CCA 90 bp AAATGTGTTCATCCACAGGCTGGCTCAAATCATTTTGCTGTGGTATGTGGATCTTGTTCATCCACAGGCTaGCTCAAATCATTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: KCVHPQAGSNHFAVVCGSCSSTG*LKSFCC
Trigger: ACAGCAAAATGATTTGAGCCAGCCTGTGGATGAACA...AGATCCACATACCACAGCAAAATGATTTGAGCCAGCCTGTGGATGAACACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS GCA 90 bp GACGGAGATCCACTGCTTCCTGTCGCCGACCCACTCCTCGGCCCCTaGCAGGCGGCGTTGCTTGTACTTGGAGAGGTCTTGATAGGCCAC +
Preference number: 5 (lower is better)
Translates to: DGDPLLPVADPLLGP*QAALLVLGEVLIGH
Trigger: GTGGCCTATCAAGACCTCTCCAAGTACAAGCAACGCCGCCTGGCAGGGGCCGAGGAGTGGGTCGGCGACAGGAAGCAGTGGATCTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS GCA 90 bp GAGAGCCCAGTGCAGAGCAGGCCTGTGCCGATCCATCGAAACAGCTaGATGTGCTCCCTGCAGAAGCTTCTGGCTCTCAGGGCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: ESPVQSRPVPIHRNS*MCSLQKLLALRAGC
Trigger: GCAGCCAGCCCTGAGAGCCAGAAGCTTCTGCAGGGAGCACATGCAGCTGTTTCGATGGATCGGCACAGGCCTGCTCTGCACTGGGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286749.3
ENST00000338602.6
ENST00000394573.6
ENST00000538177.5
CDS CCA 90 bp ACCAGGGACACACAGGCTCCCGTGAAGAGCGCCCGGAGCACTATCTaGGAGAAGTCGCTCTTCCGTTGGGGGACCATGGAGGTCAAGCCT +
Preference number: 5 (lower is better)
Translates to: TRDTQAPVKSARSTI*EKSLFRWGTMEVKP
Trigger: AGGCTTGACCTCCATGGTCCCCCAACGGAAGAGCGACTTCTCCCAGATAGTGCTCCGGGCGCTCTTCACGGGAGCCTGTGTGTCCCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp AGGGAAGGTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAGGACCAGGGTGCTGTTaGGATGTGGAGGGGAAACGG +
Preference number: 5 (lower is better)
Translates to: REGGDRWFPGENSPQKRRGPGCC*DVEGKR
Trigger: CCGTTTCCCCTCCACATCCAAACAGCACCCTGGTCC...TCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCACCTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS TCA 90 bp GGCCTGGGATCCCTCTTAAACCAGAGCAGCAGGCGGGGATGGCCCTaGGGCTTGAGAAACCTCCTCAGCTTTGGCCCCAGAAGCCGTTTC +
Preference number: 5 (lower is better)
Translates to: GLGSLLNQSSRRGWP*GLRNLLSFGPRSRF
Trigger: GAAACGGCTTCTGGGGCCAAAGCTGAGGAGGTTTCTCAAGCCTCAGGGCCATCCCCGCCTGCTGCTCTGGTTTAAGAGGGATCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CAA 90 bp GGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAAGCATGTTCTGTCCCCTGCCAGGCGGCGTaGCTTGTACTTGGAGAGGTC +
Preference number: 5 (lower is better)
Translates to: GSRGRTALRSAEAQACSVPCQAA*LVLGEV
Trigger: GACCTCTCCAAGTACAAGCAACGCCGCCTGGCAGGG...GACAGAACATGCTTGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CAA 90 bp AACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGCCCTGCCAGGCGGCGTaGCTTGTACTTGGAGAGGTC +
Preference number: 5 (lower is better)
Translates to: NASQDSVPWDLSLGSTLRPCQAA*LVLGEV
Trigger: GACCTCTCCAAGTACAAGCAACGCCGCCTGGCAGGG...CCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS TCA 90 bp CCTCCAGGGATGGTCCCTGCGGCTTTTTGTCTCACACTGTCCAGGTaGTCTGAGGGAGGTACTGATTCGGGCCCTCCTTGCTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: PPGMVPAAFCLTLSR*SEGGTDSGPPCSMA
Trigger: GGCCATGGAGCAAGGAGGGCCCGAATCAGTACCTCCCTCAGATCACCTGGACAGTGTGAGACAAAAAGCCGCAGGGACCATCCCTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS CCA 90 bp AGAAACCTCCTCAGCTTTGGCCCCAGAAGCCGTTTCAGCAGGCGGTaGCCCAGGAAGGTGAGGACCACACAGGTGAGGACAAACAGAGCC +
Preference number: 5 (lower is better)
Translates to: RNLLSFGPRSRFSRR*PRKVRTTQVRTNRA
Trigger: GGCTCTGTTTGTCCTCACCTGTGTGGTCCTCACCTTCCTGGGCCACCGCCTGCTGAAACGGCTTCTGGGGCCAAAGCTGAGGAGGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286749.3
ENST00000338602.6
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp AACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAGGTTGGCAGCGATGTaGGCGACCACCTTCACGGAG +
Preference number: 5 (lower is better)
Translates to: NASQDSVPWDLSLGSTLRRLAAM*ATTFTE
Trigger: CTCCGTGAAGGTGGTCGCCAACATCGCTGCCAACCT...CCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CAA 90 bp AACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGGGACCAGGGTGCTGTTaGGATGTGGAGGGGAAACGG +
Preference number: 5 (lower is better)
Translates to: NASQDSVPWDLSLGSTLRGPGCC*DVEGKR
Trigger: CCGTTTCCCCTCCACATCCAAACAGCACCCTGGTCC...CCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAGGGCTGAACTCTGGATaGACGCTCTGGAAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEEGLNSG*TLWKAS
Trigger: TGAGGCCTTCCAGAGCGTCAATCCAGAGTTCAGCCC...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp AGGGAAGGTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGACCATGGGACCTCAGTTaGGGAAGCACTCTGAGGAAA +
Preference number: 5 (lower is better)
Translates to: REGGDRWFPGENSPQKRRPWDLS*GSTLRK
Trigger: TTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGG...TCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCACCTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp GGTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACACCATGGGACCTCAGTTaGGGAAGCACTCTGAGGAAA +
Preference number: 5 (lower is better)
Translates to: GGDRWFPGENSPQKRRSTPWDLS*GSTLRK
Trigger: TTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGG...TGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS CCA 90 bp AAACTCGTTCAGAAACAGCTTGATCCCCAGCAGCTCAGCTACCACTaGGCAGTCCTCCCACGCCACACCCATCAAGAAGGCTACAGGCCG +
Preference number: 5 (lower is better)
Translates to: KLVQKQLDPQQLSYH*AVLPRHTHQEGYRP
Trigger: CGGCCTGTAGCCTTCTTGATGGGTGTGGCGTGGGAGGACTGCCCAGTGGTAGCTGAGCTGCTGGGGATCAAGCTGTTTCTGAACGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS CCA 90 bp CGCTCTCAGAGAGAGAGGGAAGCACACGTCTCTGTGGGGACAAGCTaGGTCCAACCTGCTTTGGCTCTGGCTTGCCTTGTCACTTCAGCA +
Preference number: 5 (lower is better)
Translates to: RSQREREAHVSVGTS*VQPALALACLVTSA
Trigger: TGCTGAAGTGACAAGGCAAGCCAGAGCCAAAGCAGGTTGGACCCAGCTTGTCCCCACAGAGACGTGTGCTTCCCTCTCTCTCTGAGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338602.6
ENST00000394573.6
CDS-3UTR CAA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAGAAACCTCCTCAGCTTaGGCCCCAGAAGCCGTTTCA +
Preference number: 5 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEEETSSA*APEAVS
Trigger: TGAAACGGCTTCTGGGGCCAAAGCTGAGGAGGTTTC...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp TCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGCTGGAAGCTGAGCCCTaGGATGTCCACCATGTCTCC +
Preference number: 5 (lower is better)
Translates to: SWNPLNASQDSVPWDLSLLEAEP*DVHHVS
Trigger: GGAGACATGGTGGACATCCAAGGGCTCAGCTTCCAG...CAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CAA 90 bp CTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGGAAGTCGCTCTTCCGTaGGGGGACCATGGAGGTCAA +
Preference number: 5 (lower is better)
Translates to: LPGQCAMGPQFGKHSEEREVALP*GDHGGQ
Trigger: TTGACCTCCATGGTCCCCCAACGGAAGAGCGACTTC...CCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp GTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCGAAGTCGCTCTTCCGTaGGGGGACCATGGAGGTCAA +
Preference number: 5 (lower is better)
Translates to: VPWDLSLGSTLRKGGKGFEVALP*GDHGGQ
Trigger: TTGACCTCCATGGTCCCCCAACGGAAGAGCGACTTC...GAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp AGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTGGGCTGAACTCTGGATaGACGCTCTGGAAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: SVPWDLSLGSTLRKGGKGGLNSG*TLWKAS
Trigger: TGAGGCCTTCCAGAGCGTCAATCCAGAGTTCAGCCC...ACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp CTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGTGGGTCCAACCTGCTTaGGCTCTGGCTTGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: LPGQCAMGPQFGKHSEERWVQPA*ALACLV
Trigger: GACAAGGCAAGCCAGAGCCAAAGCAGGTTGGACCCA...CCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394573.6
CDS GCA 90 bp GATGTTGGCGACCACCTTCACGGAGATGGCGGCCCCAGTGCTGGCTaGTTCTATGAGGTTCTGAGCATCTCCATAGGTCAGTTTCACTCC +
Preference number: 5 (lower is better)
Translates to: DVGDHLHGDGGPSAG*FYEVLSISIGQFHS
Trigger: GGAGTGAAACTGACCTATGGAGATGCTCAGAACCTCATAGAAGCAGCCAGCACTGGGGCCGCCATCTCCGTGAAGGTGGTCGCCAACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS CCA 90 bp ACAGATCGTGTGGTTGTAAAACCGACAGCAGTTGTCCAGGGCCTCTaGGCTGAACTCTGGATTGACGCTCTGGAAGGCCTCACGGCAGCA +
Preference number: 5 (lower is better)
Translates to: TDRVVVKPTAVVQGL*AELWIDALEGLTAA
Trigger: TGCTGCCGTGAGGCCTTCCAGAGCGTCAATCCAGAGTTCAGCCCAGAGGCCCTGGACAACTGCTGTCGGTTTTACAACCACACGATCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp CTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGATGTTCTCCAGACCCTaGGCCACAGGTGTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: LPGQCAMGPQFGKHSEERMFSRP*ATGVRE
Trigger: CTCTCTCACACCTGTGGCCAAGGGTCTGGAGAACAT...CCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp CGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAATCGTTCAGAAACAGCTaGATCCCCAGCAGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: RLPGQCAMGPQFGKHSEESFRNS*IPSSSA
Trigger: AGCTGAGCTGCTGGGGATCAAGCTGTTTCTGAACGA...TTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CAA 90 bp CCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCTCTGAAGTCGCTCTTCCGTaGGGGGACCATGGAGGTCAA +
Preference number: 5 (lower is better)
Translates to: PWDLSLGSTLRKGGKGFSEVALP*GDHGGQ
Trigger: TTGACCTCCATGGTCCCCCAACGGAAGAGCGACTTC...AGAGAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp GTGGGGACAGATGGTTCCCGGGGGAGAACAGCCCTCAGAAGCGCAGAAGCACAAAGACCTTCCAGGTATTaGCGGTTAACAGGTCGCTCT +
Preference number: 5 (lower is better)
Translates to: VGTDGSRGRTALRSAEAQRPSRY*RLTGRS
Trigger: AGAGCGACCTGTTAACCGCAAATACCTGGAAGGTCT...TTGTGCTTCTGCGCTTCTGAGGGCTGTTCTCCCCCGGGAACCATCTGTCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394573.6
CDS TCA 90 bp CCAAGAAATCAGCCCCCATGTTCTCCAGACCCTTGGCCACAGGTGTaGGAGAGATGGACTCTCTTCGTCTCGAGGGGTCGTTCTCCATGT +
Preference number: 5 (lower is better)
Translates to: PRNQPPCSPDPWPQV*ERWTLFVSRGRSPC
Trigger: ACATGGAGAACGACCCCTCGAGACGAAGAGAGTCCATCTCTCTCACACCTGTGGCCAAGGGTCTGGAGAACATGGGGGCTGATTTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286749.3
ENST00000338602.6
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp ATCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGAAACCTCCTCAGCTTaGGCCCCAGAAGCCGTTTCA +
Preference number: 5 (lower is better)
Translates to: IMEPSERLPGQCAMGPQFETSSA*APEAVS
Trigger: TGAAACGGCTTCTGGGGCCAAAGCTGAGGAGGTTTC...AAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp GTGCCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCTCGTTCAGAAACAGCTaGATCCCCAGCAGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: VPWDLSLGSTLRKGGKGFSFRNS*IPSSSA
Trigger: AGCTGAGCTGCTGGGGATCAAGCTGTTTCTGAACGA...GAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS GCA 90 bp AGAGAGGGAAGCACACGTCTCTGTGGGGACAAGCTGGGTCCAACCTaGTTTGGCTCTGGCTTGCCTTGTCACTTCAGCAGAAATTCCCTT +
Preference number: 5 (lower is better)
Translates to: REGSTRLCGDKLGPT*FGSGLPCHFSRNSL
Trigger: AAGGGAATTTCTGCTGAAGTGACAAGGCAAGCCAGAGCCAAAGCAGGTTGGACCCAGCTTGTCCCCACAGAGACGTGTGCTTCCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338602.6
ENST00000394573.6
CDS CCA 90 bp GGGAAGCACACGTCTCTGTGGGGACAAGCTGGGTCCAACCTGCTTTaGCTCTGGCTTGCCTTGTCACTTCAGCAGAAATTCCCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: GKHTSLWGQAGSNLL*LWLALSLQQKFPCF
Trigger: GAAACAAGGGAATTTCTGCTGAAGTGACAAGGCAAGCCAGAGCCAAAGCAGGTTGGACCCAGCTTGTCCCCACAGAGACGTGTGCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338602.6
ENST00000394573.6
CDS-3UTR CAA 90 bp CTTCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAAAGGTTGGCAGCGATGTaGGCGACCACCTTCACGGAG +
Preference number: 5 (lower is better)
Translates to: LPYVLTHSLHTHSMNPSQRLAAM*ATTFTE
Trigger: CTCCGTGAAGGTGGTCGCCAACATCGCTGCCAACCT...TTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CAA 90 bp GTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTGTGGGATCTGGAAGCTGAGCCCTaGGATGTCCACCATGTCTCC +
Preference number: 5 (lower is better)
Translates to: VLTHSLHTHSMNPSQLWDLEAEP*DVHHVS
Trigger: GGAGACATGGTGGACATCCAAGGGCTCAGCTTCCAG...ATCCCACAATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CAA 90 bp ATCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTTGCTTTGGCTCTGGCTaGCCTTGTCACTTCAGCAGA +
Preference number: 5 (lower is better)
Translates to: IMEPSERLPGQCAMGPQFCFGSG*PCHFSR
Trigger: TCTGCTGAAGTGACAAGGCAAGCCAGAGCCAAAGCA...AAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394573.6
CDS-3UTR CAA 90 bp AATGGTGGGCTGGGCGGGAAGTCTGAATTTTCCCTCCACAACCTCCCTCTCCTGAGACCTTCCAGGTATTaGCGGTTAACAGGTCGCTCT +
Preference number: 5 (lower is better)
Translates to: NGGLGGKSEFSLHNLPLLRPSRY*RLTGRS
Trigger: AGAGCGACCTGTTAACCGCAAATACCTGGAAGGTCT...CAGGAGAGGGAGGTTGTGGAGGGAAAATTCAGACTTCCCGCCCAGCCCACCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS GCA 90 bp GTCTCTGTGGGGACAAGCTGGGTCCAACCTGCTTTGGCTCTGGCTTaGCTTGTCACTTCAGCAGAAATTCCCTTGTTTCTGTCAGCATCC +
Preference number: 5 (lower is better)
Translates to: VSVGTSWVQPALALA*LVTSAEIPLFLSAS
Trigger: GGATGCTGACAGAAACAAGGGAATTTCTGCTGAAGTGACAAGGCAAGCCAGAGCCAAAGCAGGTTGGACCCAGCTTGTCCCCACAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338602.6
ENST00000394573.6
CDS CCA 90 bp CACACGTCTCTGTGGGGACAAGCTGGGTCCAACCTGCTTTGGCTCTaGCTTGCCTTGTCACTTCAGCAGAAATTCCCTTGTTTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: HTSLWGQAGSNLLWL*LALSLQQKFPCFCQ
Trigger: CTGACAGAAACAAGGGAATTTCTGCTGAAGTGACAAGGCAAGCCAGAGCCAAAGCAGGTTGGACCCAGCTTGTCCCCACAGAGACGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338602.6
ENST00000394573.6
CDS-3UTR CAA 90 bp ACCCTTCCCAATTGTGGGATTGAGCTGGGTCTAAGTCCTGTGGCTTCCCTGAAGCCAGACCTTCCAGCCTaGTTTCTGTCAGCATCCAGA +
Preference number: 5 (lower is better)
Translates to: TLPNCGIELGLSPVASLKPDLPA*FLSASR
Trigger: TCTGGATGCTGACAGAAACAAGGCTGGAAGGTCTGG...CTTCAGGGAAGCCACAGGACTTAGACCCAGCTCAATCCCACAATTGGGAAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000538177.5
CDS-3UTR CAA 90 bp ATCATGGAACCCTCTGAACGCCTCCCAGGACAGTGTGCCATGGGACCTCAGTTTGTACTTGGAGAGGTCTaGATAGGCCACAAACTCGTT +
Preference number: 5 (lower is better)
Translates to: IMEPSERLPGQCAMGPQFVLGEV*IGHKLV
Trigger: AACGAGTTTGTGGCCTATCAAGACCTCTCCAAGTAC...AAACTGAGGTCCCATGGCACACTGTCCTGGGAGGCGTTCAGAGGGTTCCATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CAA 90 bp CCATGGGACCTCAGTTTGGGAAGCACTCTGAGGAAAGGCGGGAAGGGTTTCTCTGTACTTGGAGAGGTCTaGATAGGCCACAAACTCGTT +
Preference number: 5 (lower is better)
Translates to: PWDLSLGSTLRKGGKGFSVLGEV*IGHKLV
Trigger: AACGAGTTTGTGGCCTATCAAGACCTCTCCAAGTAC...AGAGAAACCCTTCCCGCCTTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS-3UTR CAA 90 bp TCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTGGGCTGAACTCTGGATaGACGCTCTGGAAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: SLCPHSLSAHSLHEPFPIGLNSG*TLWKAS
Trigger: TGAGGCCTTCCAGAGCGTCAATCCAGAGTTCAGCCC...AATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp AATGGTGGGCTGGGCGGGAAGTCTGAATTTTCCCTCCACAACCTCCCTCTCCTGTCAGCAGAAATTCCCTaGTTTCTGTCAGCATCCAGA +
Preference number: 5 (lower is better)
Translates to: NGGLGGKSEFSLHNLPLLSAEIP*FLSASR
Trigger: TCTGGATGCTGACAGAAACAAGGGAATTTCTGCTGA...CAGGAGAGGGAGGTTGTGGAGGGAAAATTCAGACTTCCCGCCCAGCCCACCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CAA 90 bp ACCCTTCCCAATTGTGGGATTGAGCTGGGTCTAAGTCCTGTGGCTTCCCTGAAGTGGCTCTGGCTTGCCTaGTCACTTCAGCAGAAATTC +
Preference number: 5 (lower is better)
Translates to: TLPNCGIELGLSPVASLKWLWLA*SLQQKF
Trigger: GAATTTCTGCTGAAGTGACAAGGCAAGCCAGAGCCA...CTTCAGGGAAGCCACAGGACTTAGACCCAGCTCAATCCCACAATTGGGAAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394573.6
CDS-3UTR CAA 90 bp CTTCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAACCAGACCTTCCAGCCTaGTTTCTGTCAGCATCCAGA +
Preference number: 5 (lower is better)
Translates to: LPYVLTHSLHTHSMNPSQPDLPA*FLSASR
Trigger: TCTGGATGCTGACAGAAACAAGGCTGGAAGGTCTGG...TTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000538177.5
CDS-3UTR CAA 90 bp TCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTATGTTCTCCAGACCCTaGGCCACAGGTGTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: SLCPHSLSAHSLHEPFPIMFSRP*ATGVRE
Trigger: CTCTCTCACACCTGTGGCCAAGGGTCTGGAGAACAT...AATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp GAATCCAGTTTGAAAAGCAGCAGATCTCAAACTGTTGTCCAAGGACGCTGCTGGATGTTCTCCAGACCCTaGGCCACAGGTGTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: ESSLKSSRSQTVVQGRCWMFSRP*ATGVRE
Trigger: CTCTCTCACACCTGTGGCCAAGGGTCTGGAGAACAT...CCAGCAGCGTCCTTGGACAACAGTTTGAGATCTGCTGCTTTTCAAACTGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CAA 90 bp TCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTGAAACCTCCTCAGCTTaGGCCCCAGAAGCCGTTTCA +
Preference number: 5 (lower is better)
Translates to: SLCPHSLSAHSLHEPFPIETSSA*APEAVS
Trigger: TGAAACGGCTTCTGGGGCCAAAGCTGAGGAGGTTTC...AATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp TCCAGTTTGAAAAGCAGCAGATCTCAAACTGTTGTCCAAGGACGCTGCTGGCTAGAAACCTCCTCAGCTTaGGCCCCAGAAGCCGTTTCA +
Preference number: 5 (lower is better)
Translates to: SSLKSSRSQTVVQGRCWLETSSA*APEAVS
Trigger: TGAAACGGCTTCTGGGGCCAAAGCTGAGGAGGTTTC...TAGCCAGCAGCGTCCTTGGACAACAGTTTGAGATCTGCTGCTTTTCAAACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CAA 90 bp AAGGAATCCAGTTTGAAAAGCAGCAGATCTCAAACTGTTGTCCAAGGACGCTGCTGGGTCCAACCTGCTTaGGCTCTGGCTTGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: KESSLKSSRSQTVVQGRCWVQPA*ALACLV
Trigger: GACAAGGCAAGCCAGAGCCAAAGCAGGTTGGACCCA...GCAGCGTCCTTGGACAACAGTTTGAGATCTGCTGCTTTTCAAACTGGATTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CAA 90 bp AATGGTGGGCTGGGCGGGAAGTCTGAATTTTCCCTCCACAACCTCCCTCTCCTGTCCAAGGAATCCAGTTaGAAAAGCAGCAGATCTCAA +
Preference number: 5 (lower is better)
Translates to: NGGLGGKSEFSLHNLPLLSKESS*KSSRSQ
Trigger: TTGAGATCTGCTGCTTTTCAAACTGGATTCCTTGGA...CAGGAGAGGGAGGTTGTGGAGGGAAAATTCAGACTTCCCGCCCAGCCCACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CAA 90 bp TCCTTATGTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTCCATGGGACCTCAGTTaGGGAAGCACTCTGAGGAAA +
Preference number: 5 (lower is better)
Translates to: SLCPHSLSAHSLHEPFPIPWDLS*GSTLRK
Trigger: TTTCCTCAGAGTGCTTCCCAAACTGAGGTCCCATGG...AATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGACATAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS-3UTR CAA 90 bp GTCCTCACTCACTCTCTGCACACTCACTCCATGAACCCTTCCCAATTGTGGGATTCAGCAGAAATTCCCTaGTTTCTGTCAGCATCCAGA +
Preference number: 5 (lower is better)
Translates to: VLTHSLHTHSMNPSQLWDSAEIP*FLSASR
Trigger: TCTGGATGCTGACAGAAACAAGGGAATTTCTGCTGA...ATCCCACAATTGGGAAGGGTTCATGGAGTGAGTGTGCAGAGAGTGAGTGAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394573.6
CDS-3UTR CAA 90 bp ACATCGCTGAGATTTCCAGCGCTCCAAGGAATCCAGTTTGAAAAGCAGCAGATCTGGCTCTGGCTTGCCTaGTCACTTCAGCAGAAATTC +
Preference number: 5 (lower is better)
Translates to: TSLRFPALQGIQFEKQQIWLWLA*SLQQKF
Trigger: GAATTTCTGCTGAAGTGACAAGGCAAGCCAGAGCCA...GATCTGCTGCTTTTCAAACTGGATTCCTTGGAGCGCTGGAAATCTCAGCGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CAA 90 bp CCCCCTGACTTAGTCTTTGGGTATCTTTGGTCACCAGCTTCTTCATCAACAAAATGCTTTGGCTCTGGCTaGCCTTGTCACTTCAGCAGA +
Preference number: 5 (lower is better)
Translates to: PPDLVFGYLWSPASSSTKCFGSG*PCHFSR
Trigger: TCTGCTGAAGTGACAAGGCAAGCCAGAGCCAAAGCA...TTTTGTTGATGAAGAAGCTGGTGACCAAAGATACCCAAAGACTAAGTCAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CAA 90 bp ATCCACAGGCTGGCTCAAATCATTTTGCTGTGGTATGTGGATCTCACTTTGGGAAGTCTTTGGGTATCTTaGGTCACCAGCTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: IHRLAQIILLWYVDLTLGSLWVS*VTSFFI
Trigger: GATGAAGAAGCTGGTGACCAAAGATACCCAAAGACT...TCCCAAAGTGAGATCCACATACCACAGCAAAATGATTTGAGCCAGCCTGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS-3UTR CAA 90 bp ATAAATTTAGAGCTGCCTGGTGAAATGGTGGGCTGGGCGGGAAGTCTGAATTTTCTGGCTCAAATCATTTaGCTGTGGTATGTGGATCTC +
Preference number: 5 (lower is better)
Translates to: INLELPGEMVGWAGSLNFLAQII*LWYVDL
Trigger: GAGATCCACATACCACAGCAAAATGATTTGAGCCAG...AAAATTCAGACTTCCCGCCCAGCCCACCATTTCACCAGGCAGCTCTAAATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS GCA 72 bp CCACTGCTTCCTGTCGCCGACCCACTCCTCGGCCCCTaGCAGGCGGCGTTGCTTGTACTTGGAGAGGTCTTG +
Preference number: 6 (lower is better)
Translates to: PLLPVADPLLGP*QAALLVLGEVL
Trigger: CAAGACCTCTCCAAGTACAAGCAACGCCGCCTGGCAGGGGCCGAGGAGTGGGTCGGCGACAGGAAGCAGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS TCA 72 bp CCATACAGGCGTTCACCAGGGACACACAGGCTCCCGTaGAGAGCGCCCGGAGCACTATCTGGGAGAAGTCGC +
Preference number: 6 (lower is better)
Translates to: PYRRSPGTHRLP*RAPGALSGRSR
Trigger: GCGACTTCTCCCAGATAGTGCTCCGGGCGCTCTTCACGGGAGCCTGTGTGTCCCTGGTGAACGCCTGTATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS CCA 72 bp CTCAGCTTTGGCCCCAGAAGCCGTTTCAGCAGGCGGTaGCCCAGGAAGGTGAGGACCACACAGGTGAGGACA +
Preference number: 6 (lower is better)
Translates to: LSFGPRSRFSRR*PRKVRTTQVRT
Trigger: TGTCCTCACCTGTGTGGTCCTCACCTTCCTGGGCCACCGCCTGCTGAAACGGCTTCTGGGGCCAAAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286749.3
ENST00000338602.6
ENST00000394573.6
ENST00000538177.5
CDS CCA 72 bp ACACAGGCTCCCGTGAAGAGCGCCCGGAGCACTATCTaGGAGAAGTCGCTCTTCCGTTGGGGGACCATGGAG +
Preference number: 6 (lower is better)
Translates to: TQAPVKSARSTI*EKSLFRWGTME
Trigger: CTCCATGGTCCCCCAACGGAAGAGCGACTTCTCCCAGATAGTGCTCCGGGCGCTCTTCACGGGAGCCTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS CCA 72 bp CTGAGGGAGGTACTGATTCGGGCCCTCCTTGCTCCATaGCCTGGGATCCCTCTTAAACCAGAGCAGCAGGCG +
Preference number: 6 (lower is better)
Translates to: LREVLIRALLAP*PGIPLKPEQQA
Trigger: CGCCTGCTGCTCTGGTTTAAGAGGGATCCCAGGCCATGGAGCAAGGAGGGCCCGAATCAGTACCTCCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS CAA 72 bp CGCCCGGAGCACTATCTGGGAGAAGTCGCTCTTCCGTaGGGGGACCATGGAGGTCAAGCCTCCCAGCATGAT +
Preference number: 6 (lower is better)
Translates to: RPEHYLGEVALP*GDHGGQASQHD
Trigger: ATCATGCTGGGAGGCTTGACCTCCATGGTCCCCCAACGGAAGAGCGACTTCTCCCAGATAGTGCTCCGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5
CDS TCA 72 bp CAGCCCCCATGTTCTCCAGACCCTTGGCCACAGGTGTaGGAGAGATGGACTCTCTTCGTCTCGAGGGGTCGT +
Preference number: 6 (lower is better)
Translates to: QPPCSPDPWPQV*ERWTLFVSRGR
Trigger: ACGACCCCTCGAGACGAAGAGAGTCCATCTCTCTCACACCTGTGGCCAAGGGTCTGGAGAACATGGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286749.3
ENST00000338602.6
ENST00000394573.6
ENST00000538177.5
CDS TCA 72 bp TCCCTCTTAAACCAGAGCAGCAGGCGGGGATGGCCCTaGGGCTTGAGAAACCTCCTCAGCTTTGGCCCCAGA +
Preference number: 6 (lower is better)
Translates to: SLLNQSSRRGWP*GLRNLLSFGPR
Trigger: TCTGGGGCCAAAGCTGAGGAGGTTTCTCAAGCCTCAGGGCCATCCCCGCCTGCTGCTCTGGTTTAAGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS GCA 72 bp GTGCAGAGCAGGCCTGTGCCGATCCATCGAAACAGCTaGATGTGCTCCCTGCAGAAGCTTCTGGCTCTCAGG +
Preference number: 6 (lower is better)
Translates to: VQSRPVPIHRNS*MCSLQKLLALR
Trigger: CCTGAGAGCCAGAAGCTTCTGCAGGGAGCACATGCAGCTGTTTCGATGGATCGGCACAGGCCTGCTCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286749.3
ENST00000338602.6
ENST00000394573.6
ENST00000538177.5
CDS CCA 72 bp CAGAAACAGCTTGATCCCCAGCAGCTCAGCTACCACTaGGCAGTCCTCCCACGCCACACCCATCAAGAAGGC +
Preference number: 6 (lower is better)
Translates to: QKQLDPQQLSYH*AVLPRHTHQEG
Trigger: GCCTTCTTGATGGGTGTGGCGTGGGAGGACTGCCCAGTGGTAGCTGAGCTGCTGGGGATCAAGCTGTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS CAA 90 bp CTCCTCGGCCCCTGCCAGGCGGCGTTGCTTGTACTTGGAGAGGTCTaGATAGGCCACAAACTCGTTCAGAAACAGCTTGATCCCCAGCAG +
Preference number: 6 (lower is better)
Translates to: LLGPCQAALLVLGEV*IGHKLVQKQLDPQQ
Trigger: CTGCTGGGGATCAAGCTGTTTCTGAACGAGTTTGTGGCCTATCAAGACCTCTCCAAGTACAAGCAACGCCGCCTGGCAGGGGCCGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS GCA 72 bp GACCACCTTCACGGAGATGGCGGCCCCAGTGCTGGCTaGTTCTATGAGGTTCTGAGCATCTCCATAGGTCAG +
Preference number: 6 (lower is better)
Translates to: DHLHGDGGPSAG*FYEVLSISIGQ
Trigger: CTGACCTATGGAGATGCTCAGAACCTCATAGAAGCAGCCAGCACTGGGGCCGCCATCTCCGTGAAGGTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS CCA 72 bp AGAGAGAGGGAAGCACACGTCTCTGTGGGGACAAGCTaGGTCCAACCTGCTTTGGCTCTGGCTTGCCTTGTC +
Preference number: 6 (lower is better)
Translates to: REREAHVSVGTS*VQPALALACLV
Trigger: GACAAGGCAAGCCAGAGCCAAAGCAGGTTGGACCCAGCTTGTCCCCACAGAGACGTGTGCTTCCCTCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338602.6
ENST00000394573.6
CDS CAA 90 bp TCCTCCAGGCTTTCCAAGAAATCAGCCCCCATGTTCTCCAGACCCTaGGCCACAGGTGTGAGAGAGATGGACTCTCTTCGTCTCGAGGGG +
Preference number: 6 (lower is better)
Translates to: SSRLSKKSAPMFSRP*ATGVREMDSLRLEG
Trigger: CCCCTCGAGACGAAGAGAGTCCATCTCTCTCACACCTGTGGCCAAGGGTCTGGAGAACATGGGGGCTGATTTCTTGGAAAGCCTGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286749.3
ENST00000338602.6
ENST00000394573.6
ENST00000538177.5
CDS TCA 72 bp ATGGTCCCTGCGGCTTTTTGTCTCACACTGTCCAGGTaGTCTGAGGGAGGTACTGATTCGGGCCCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: MVPAAFCLTLSR*SEGGTDSGPPC
Trigger: GCAAGGAGGGCCCGAATCAGTACCTCCCTCAGATCACCTGGACAGTGTGAGACAAAAAGCCGCAGGGACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS CCA 72 bp ACTCCTCGGCCCCTGCCAGGCGGCGTTGCTTGTACTTaGAGAGGTCTTGATAGGCCACAAACTCGTTCAGAA +
Preference number: 6 (lower is better)
Translates to: TPRPLPGGVACT*RGLDRPQTRSE
Trigger: TTCTGAACGAGTTTGTGGCCTATCAAGACCTCTCCAAGTACAAGCAACGCCGCCTGGCAGGGGCCGAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS TCA 72 bp TCACGGAGATGGCGGCCCCAGTGCTGGCTGCTTCTATaGGGTTCTGAGCATCTCCATAGGTCAGTTTCACTC +
Preference number: 6 (lower is better)
Translates to: SRRWRPQCWLLL*GSEHLHRSVSL
Trigger: GAGTGAAACTGACCTATGGAGATGCTCAGAACCTCATAGAAGCAGCCAGCACTGGGGCCGCCATCTCCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS CCA 72 bp CTGTGGGGACAAGCTGGGTCCAACCTGCTTTGGCTCTaGCTTGCCTTGTCACTTCAGCAGAAATTCCCTTGT +
Preference number: 6 (lower is better)
Translates to: LWGQAGSNLLWL*LALSLQQKFPC
Trigger: ACAAGGGAATTTCTGCTGAAGTGACAAGGCAAGCCAGAGCCAAAGCAGGTTGGACCCAGCTTGTCCCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338602.6
ENST00000394573.6
CDS CAA 72 bp CACGTCTCTGTGGGGACAAGCTGGGTCCAACCTGCTTaGGCTCTGGCTTGCCTTGTCACTTCAGCAGAAATT +
Preference number: 6 (lower is better)
Translates to: HVSVGTSWVQPA*ALACLVTSAEI
Trigger: AATTTCTGCTGAAGTGACAAGGCAAGCCAGAGCCAAAGCAGGTTGGACCCAGCTTGTCCCCACAGAGACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338602.6
ENST00000394573.6
CDS CAA 90 bp CGTCTCTGTGGGGACAAGCTGGGTCCAACCTGCTTTGGCTCTGGCTaGCCTTGTCACTTCAGCAGAAATTCCCTTGTTTCTGTCAGCATC +
Preference number: 6 (lower is better)
Translates to: RLCGDKLGPTCFGSG*PCHFSRNSLVSVSI
Trigger: GATGCTGACAGAAACAAGGGAATTTCTGCTGAAGTGACAAGGCAAGCCAGAGCCAAAGCAGGTTGGACCCAGCTTGTCCCCACAGAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338602.6
ENST00000394573.6
CDS CAA 90 bp AGGGAAGCACACGTCTCTGTGGGGACAAGCTGGGTCCAACCTGCTTaGGCTCTGGCTTGCCTTGTCACTTCAGCAGAAATTCCCTTGTTT +
Preference number: 6 (lower is better)
Translates to: REAHVSVGTSWVQPA*ALACLVTSAEIPLF
Trigger: AAACAAGGGAATTTCTGCTGAAGTGACAAGGCAAGCCAGAGCCAAAGCAGGTTGGACCCAGCTTGTCCCCACAGAGACGTGTGCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338602.6
ENST00000394573.6
CDS GCA 72 bp GGGAAGCCAGGAACACAACACATCCAGCAGCAACCATaGAGTGCAGCTTATAACCTTCACATCGTTGTGGGC +
Preference number: 6 (lower is better)
Translates to: GKPGTQHIQQQP*SAAYNLHIVVG
Trigger: GCCCACAACGATGTGAAGGTTATAAGCTGCACTGCATGGTTGCTGCTGGATGTGTTGTGTTCCTGGCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338602.6
CDS GCA 72 bp GGGACAAGCTGGGTCCAACCTGCTTTGGCTCTGGCTTaGCTTGTCACTTCAGCAGAAATTCCCTTGTTTCTG +
Preference number: 6 (lower is better)
Translates to: GTSWVQPALALA*LVTSAEIPLFL
Trigger: CAGAAACAAGGGAATTTCTGCTGAAGTGACAAGGCAAGCCAGAGCCAAAGCAGGTTGGACCCAGCTTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338602.6
ENST00000394573.6
CDS CAA 72 bp CTTTCCAAGAAATCAGCCCCCATGTTCTCCAGACCCTaGGCCACAGGTGTGAGAGAGATGGACTCTCTTCGT +
Preference number: 6 (lower is better)
Translates to: LSKKSAPMFSRP*ATGVREMDSLR
Trigger: ACGAAGAGAGTCCATCTCTCTCACACCTGTGGCCAAGGGTCTGGAGAACATGGGGGCTGATTTCTTGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286749.3
ENST00000338602.6
ENST00000394573.6
ENST00000538177.5
CDS CAA 72 bp CCCTGCCAGGCGGCGTTGCTTGTACTTGGAGAGGTCTaGATAGGCCACAAACTCGTTCAGAAACAGCTTGAT +
Preference number: 6 (lower is better)
Translates to: PCQAALLVLGEV*IGHKLVQKQLD
Trigger: ATCAAGCTGTTTCTGAACGAGTTTGTGGCCTATCAAGACCTCTCCAAGTACAAGCAACGCCGCCTGGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286749.3
ENST00000394573.6
CDS TCA 72 bp CACGGCAGCACTGGTAAATCTCAAAGCTACTGCTGCTaGGGGTCGTGTTCAAGAGGGACATGCAGTCAACTT +
Preference number: 6 (lower is better)
Translates to: HGSTGKSQSYCC*GSCSRGTCSQL
Trigger: AAGTTGACTGCATGTCCCTCTTGAACACGACCCTCAGCAGCAGTAGCTTTGAGATTTACCAGTGCTGCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286749.3
ENST00000394573.6
ENST00000538177.5