Pregenerated sensors for SLC27A6 (Homo sapiens)
Ensembl gene IDs: ENSG00000113396Ensembl transcript IDs: ENST00000262462.9, ENST00000395266.5, ENST00000506176.1, ENST00000508645.5
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AACCCCAGCGCTGCGCCCTCGCCTCCCAACCGCGACAGCGGCCCGTaGCCTGCGAGTTCCCCAGGACTTTCCAGACCTCTTCTCTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: NPSAAPSPPNRDSGP*PASSPGLSRPLLCE Trigger: CTCACAGAGAAGAGGTCTGGAAAGTCCTGGGGAACTCGCAGGGCACGGGCCGCTGTCGCGGTTGGGAGGCGAGGGCGCAGCGCTGGGGTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262462.9 |
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| CDS TCA 90 bp | AGAAAGGCCACCACGCAGCCCAGCTTGGCGAGGCCGAACCACACGTaGACGAAGTCCGGCTCATTGCTCATCAGCAGAGCCACCGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: RKATTQPSLARPNHT*TKSGSLLISRATVS Trigger: GGACACGGTGGCTCTGCTGATGAGCAATGAGCCGGACTTCGTTCACGTGTGGTTCGGCCTCGCCAAGCTGGGCTGCGTGGTGGCCTTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS TCA 90 bp | AGGCGCGGATGCAATTCAGGAGGGAGTTGGAGCGAATGTTGGTGTTaGGAAAGGCCACCACGCAGCCCAGCTTGGCGAGGCCGAACCACA | + |
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Preference number: 5 (lower is better) Translates to: RRGCNSGGSWSECWC*ERPPRSPAWRGRTT Trigger: TGTGGTTCGGCCTCGCCAAGCTGGGCTGCGTGGTGGCCTTTCTCAACACCAACATTCGCTCCAACTCCCTCCTGAATTGCATCCGCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS CCA 90 bp | TCGCCCCAAGTGGTGCTGAAGATTAAGCTTGGGTCACTGGGCGGCTaGAAAGCAGGGAGCCTCCGACTCCTGCGAGAAACCAACACAGCC | + |
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Preference number: 5 (lower is better) Translates to: SPQVVLKIKLGSLGG*KAGSLRLLRETNTA Trigger: GGCTGTGTTGGTTTCTCGCAGGAGTCGGAGGCTCCCTGCTTTCCAGCCGCCCAGTGACCCAAGCTTAATCTTCAGCACCACTTGGGGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262462.9 |
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| CDS GCA 90 bp | CCAGCTTGGCGAGGCCGAACCACACGTGAACGAAGTCCGGCTCATTaGTCATCAGCAGAGCCACCGTGTCCCCCTTTTTCAGAGAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: PAWRGRTTRERSPAH*SSAEPPCPPFSERN Trigger: ATTCCTCTCTGAAAAAGGGGGACACGGTGGCTCTGCTGATGAGCAATGAGCCGGACTTCGTTCACGTGTGGTTCGGCCTCGCCAAGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS TCA 90 bp | CCTGCGAGTTCCCCAGGACTTTCCAGACCTCTTCTCTGTGAGGGCTaGGTCAGTCCTCCCTGCTTCTGCGACCCTAAACAAACCTCACCA | + |
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Preference number: 5 (lower is better) Translates to: PASSPGLSRPLLCEG*VSPPCFCDPKQTSP Trigger: TGGTGAGGTTTGTTTAGGGTCGCAGAAGCAGGGAGGACTGACTCAGCCCTCACAGAGAAGAGGTCTGGAAAGTCCTGGGGAACTCGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262462.9 |
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| CDS TCA 90 bp | GGCTGCGTGGCACGGGCTCATCAGGTGAGGTGCTCAGTTTTTCTTTaGGTGAAATTACACCTTGTGGAACAGAATCTTTCATCCCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: GCVARAHQVRCSVFL*VKLHLVEQNLSSPK Trigger: TTTGGGGGATGAAAGATTCTGTTCCACAAGGTGTAATTTCACTCAAAGAAAAACTGAGCACCTCACCTGATGAGCCCGTGCCACGCAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 ENST00000508645.5 |
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| CDS GCA 90 bp | TGTGTAGACATTTGTGCGGATGGCCATCAAAGGAGCTTGCTATTCTaGCATCTTGCTCCACTTCACCTCTGTACTTTACTAAGGCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: CVDICADGHQRSLLF*HLAPLHLCTLLRQP Trigger: GGGCTGCCTTAGTAAAGTACAGAGGTGAAGTGGAGCAAGATGGCAGAATAGCAAGCTCCTTTGATGGCCATCCGCACAAATGTCTACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508645.5 |
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| CDS GCA 90 bp | CCTTTTTCAGAGAGGAATGGTTCAGGAAGACATGGGCCACTCTGCTaGTCCTTTTGTCTACATCCTGATAGGTGTAGATGTCTCCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: PFSERNGSGRHGPLC*SFCLHPDRCRCLPH Trigger: ATGAGGGAGACATCTACACCTATCAGGATGTAGACAAAAGGAGCAGCAGAGTGGCCCATGTCTTCCTGAACCATTCCTCTCTGAAAAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS GCA 90 bp | CATTTGTGCGGATGGCCATCAAAGGAGCTTGCTATTCTGCCATCTTaGTCCACTTCACCTCTGTACTTTACTAAGGCAGCCCTGTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: HLCGWPSKELAILPS*STSPLYFTKAALFL Trigger: AAGAAACAGGGCTGCCTTAGTAAAGTACAGAGGTGAAGTGGAGCAAGATGGCAGAATAGCAAGCTCCTTTGATGGCCATCCGCACAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508645.5 |
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| CDS GCA 90 bp | CTGTATGAAATCCAACATTCCAATAACATCAGCAACCTCAGTGGTTaGGACATTTTCTCCTTTCCATCTGAAAGTGTCTCCAGTACGGTC | + |
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Preference number: 5 (lower is better) Translates to: LYEIQHSNNISNLSG*DIFSFPSESVSSTV Trigger: GACCGTACTGGAGACACTTTCAGATGGAAAGGAGAAAATGTCGCAACCACTGAGGTTGCTGATGTTATTGGAATGTTGGATTTCATACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS TCA 90 bp | GTGAAATTACACCTTGTGGAACAGAATCTTTCATCCCCCAAACACTaGTATTTTCTGAGAGGCTTGGAAGGATTTCTTCTACCGTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: VKLHLVEQNLSSPKH*YFLRGLEGFLLPFQ Trigger: TTGGAACGGTAGAAGAAATCCTTCCAAGCCTCTCAGAAAATATCAGTGTTTGGGGGATGAAAGATTCTGTTCCACAAGGTGTAATTTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 ENST00000508645.5 |
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| CDS TCA 90 bp | CCCAATTGCTCCAATTCTCCCAGTGTAGTTCATGAAAGATATGCTTaGTTCGGTAGCTGCATAAAGTTCACACACCTTTATATTTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: PNCSNSPSVVHERYA*FGSCIKFTHLYISK Trigger: TTTGGAAATATAAAGGTGTGTGAACTTTATGCAGCTACCGAATCAAGCATATCTTTCATGAACTACACTGGGAGAATTGGAGCAATTGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS GCA 72 bp | GCTGCGCCCTCGCCTCCCAACCGCGACAGCGGCCCGTaGCCTGCGAGTTCCCCAGGACTTTCCAGACCTCTT | + |
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Preference number: 6 (lower is better) Translates to: AAPSPPNRDSGP*PASSPGLSRPL Trigger: AAGAGGTCTGGAAAGTCCTGGGGAACTCGCAGGGCACGGGCCGCTGTCGCGGTTGGGAGGCGAGGGCGCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262462.9 |
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| CDS CAA 90 bp | GCCTCCGACTCCTGCGAGAAACCAACACAGCCACCCTCAGGGGTCTaGGAATCTACAACCCCAGCGCTGCGCCCTCGCCTCCCAACCGCG | + |
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Preference number: 6 (lower is better) Translates to: ASDSCEKPTQPPSGV*ESTTPALRPRLPTA Trigger: CGCGGTTGGGAGGCGAGGGCGCAGCGCTGGGGTTGTAGATTCCAAGACCCCTGAGGGTGGCTGTGTTGGTTTCTCGCAGGAGTCGGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262462.9 |
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| CDS CAA 90 bp | GGCCCACAGGCGCGGATGCAATTCAGGAGGGAGTTGGAGCGAATGTaGGTGTTGAGAAAGGCCACCACGCAGCCCAGCTTGGCGAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: GPQARMQFRRELERM*VLRKATTQPSLARP Trigger: CGGCCTCGCCAAGCTGGGCTGCGTGGTGGCCTTTCTCAACACCAACATTCGCTCCAACTCCCTCCTGAATTGCATCCGCGCCTGTGGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS TCA 72 bp | ACCACGCAGCCCAGCTTGGCGAGGCCGAACCACACGTaGACGAAGTCCGGCTCATTGCTCATCAGCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: TTQPSLARPNHT*TKSGSLLISRA Trigger: GGCTCTGCTGATGAGCAATGAGCCGGACTTCGTTCACGTGTGGTTCGGCCTCGCCAAGCTGGGCTGCGTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS GCA 72 bp | CGCCCACCACTAGGGCTCTGGGCCCACAGGCGCGGATaGAATTCAGGAGGGAGTTGGAGCGAATGTTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: RPPLGLWAHRRG*NSGGSWSECWC Trigger: ACACCAACATTCGCTCCAACTCCCTCCTGAATTGCATCCGCGCCTGTGGGCCCAGAGCCCTAGTGGTGGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS CCA 72 bp | CCGTTCCAAGCAAATCTGCGCCCACCACTAGGGCTCTaGGCCCACAGGCGCGGATGCAATTCAGGAGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: PFQANLRPPLGL*AHRRGCNSGGS Trigger: ACTCCCTCCTGAATTGCATCCGCGCCTGTGGGCCCAGAGCCCTAGTGGTGGGCGCAGATTTGCTTGGAACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS CAA 72 bp | TCCTGCGAGAAACCAACACAGCCACCCTCAGGGGTCTaGGAATCTACAACCCCAGCGCTGCGCCCTCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SCEKPTQPPSGV*ESTTPALRPRL Trigger: GAGGCGAGGGCGCAGCGCTGGGGTTGTAGATTCCAAGACCCCTGAGGGTGGCTGTGTTGGTTTCTCGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262462.9 |
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| CDS CAA 90 bp | CAGGCGCGGATGCAATTCAGGAGGGAGTTGGAGCGAATGTTGGTGTaGAGAAAGGCCACCACGCAGCCCAGCTTGGCGAGGCCGAACCAC | + |
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Preference number: 6 (lower is better) Translates to: QARMQFRRELERMLV*RKATTQPSLARPNH Trigger: GTGGTTCGGCCTCGCCAAGCTGGGCTGCGTGGTGGCCTTTCTCAACACCAACATTCGCTCCAACTCCCTCCTGAATTGCATCCGCGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS CAA 90 bp | ACTAGGGCTCTGGGCCCACAGGCGCGGATGCAATTCAGGAGGGAGTaGGAGCGAATGTTGGTGTTGAGAAAGGCCACCACGCAGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TRALGPQARMQFRRE*ERMLVLRKATTQPS Trigger: GCTGGGCTGCGTGGTGGCCTTTCTCAACACCAACATTCGCTCCAACTCCCTCCTGAATTGCATCCGCGCCTGTGGGCCCAGAGCCCTAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS CCA 72 bp | GTGGTGCTGAAGATTAAGCTTGGGTCACTGGGCGGCTaGAAAGCAGGGAGCCTCCGACTCCTCACCACCCTC | + |
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Preference number: 6 (lower is better) Translates to: VVLKIKLGSLGG*KAGSLRLLTTL Trigger: GAGGGTGGTGAGGAGTCGGAGGCTCCCTGCTTTCCAGCCGCCCAGTGACCCAAGCTTAATCTTCAGCACCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506176.1 |
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| CDS CAA 72 bp | CTGGGCCCACAGGCGCGGATGCAATTCAGGAGGGAGTaGGAGCGAATGTTGGTGTTGAGAAAGGCCACCACG | + |
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Preference number: 6 (lower is better) Translates to: LGPQARMQFRRE*ERMLVLRKATT Trigger: CGTGGTGGCCTTTCTCAACACCAACATTCGCTCCAACTCCCTCCTGAATTGCATCCGCGCCTGTGGGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS GCA 72 bp | CGAGGCCGAACCACACGTGAACGAAGTCCGGCTCATTaGTCATCAGCAGAGCCACCGTGTCCCCCTTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: RGRTTRERSPAH*SSAEPPCPPFS Trigger: TGAAAAAGGGGGACACGGTGGCTCTGCTGATGAGCAATGAGCCGGACTTCGTTCACGTGTGGTTCGGCCTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS CAA 72 bp | GCGCGGATGCAATTCAGGAGGGAGTTGGAGCGAATGTaGGTGTTGAGAAAGGCCACCACGCAGCCCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: ARMQFRRELERM*VLRKATTQPSL Trigger: CAAGCTGGGCTGCGTGGTGGCCTTTCTCAACACCAACATTCGCTCCAACTCCCTCCTGAATTGCATCCGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS TCA 72 bp | GGAGACCGCAGATCCTCACTACTCAGGGCTTACACCTaGAGTTCTTGTCAGCTTTTCCGGGGCGAAGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: GDRRSSLLRAYT*SSCQLFRGEAG Trigger: TCCCGCTTCGCCCCGGAAAAGCTGACAAGAACTTCAGGTGTAAGCCCTGAGTAGTGAGGATCTGCGGTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS TCA 72 bp | GTAGGTTTGCACCGAAAAGGTCGCCCCAAGTGGTGCTaGAGATTAAGCTTGGGTCACTGGGCGGCTGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: VGLHRKGRPKWC*RLSLGHWAAGK Trigger: CTTTCCAGCCGCCCAGTGACCCAAGCTTAATCTTCAGCACCACTTGGGGCGACCTTTTCGGTGCAAACCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000262462.9 ENST00000506176.1 |
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| CDS CCA 72 bp | AGCAGAGCCACCGTGTCCCCCTTTTTCAGAGAGGAATaGTTCAGGAAGACATGGGCCACTCTGCTGCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SRATVSPFFREE*FRKTWATLLLL Trigger: AAGGAGCAGCAGAGTGGCCCATGTCTTCCTGAACCATTCCTCTCTGAAAAAGGGGGACACGGTGGCTCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS CAA 72 bp | TTTCTCCTCTCAGGTAGTCTTTCCCGCGAGCTTGAGTaGGAGGCTGAATTCGAGCCGGGAAAAGCTGGGATG | + |
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Preference number: 6 (lower is better) Translates to: FLLSGSLSRELE*EAEFEPGKAGM Trigger: CATCCCAGCTTTTCCCGGCTCGAATTCAGCCTCCAACTCAAGCTCGCGGGAAAGACTACCTGAGAGGAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS CAA 72 bp | AAGCTTTTCTCCTCTCAGGTAGTCTTTCCCGCGAGCTaGAGTTGGAGGCTGAATTCGAGCCGGGAAAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: KLFSSQVVFPAS*SWRLNSSREKL Trigger: CAGCTTTTCCCGGCTCGAATTCAGCCTCCAACTCAAGCTCGCGGGAAAGACTACCTGAGAGGAGAAAAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS CAA 90 bp | ACAGAAGCTTTTCTCCTCTCAGGTAGTCTTTCCCGCGAGCTTGAGTaGGAGGCTGAATTCGAGCCGGGAAAAGCTGGGATGATGATGACT | + |
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Preference number: 6 (lower is better) Translates to: TEAFLLSGSLSRELE*EAEFEPGKAGMMMT Trigger: AGTCATCATCATCCCAGCTTTTCCCGGCTCGAATTCAGCCTCCAACTCAAGCTCGCGGGAAAGACTACCTGAGAGGAGAAAAGCTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS GCA 72 bp | GGATGGCCATCAAAGGAGCTTGCTATTCTGCCATCTTaGTCCACTTCACCTCTGTACTTTACTAAGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GWPSKELAILPS*STSPLYFTKAA Trigger: GGCTGCCTTAGTAAAGTACAGAGGTGAAGTGGAGCAAGATGGCAGAATAGCAAGCTCCTTTGATGGCCATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508645.5 |
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| CDS CAA 90 bp | TGGCTGCGTGGCACGGGCTCATCAGGTGAGGTGCTCAGTTTTTCTTaGAGTGAAATTACACCTTGTGGAACAGAATCTTTCATCCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: WLRGTGSSGEVLSFS*SEITPCGTESFIPQ Trigger: TTGGGGGATGAAAGATTCTGTTCCACAAGGTGTAATTTCACTCAAAGAAAAACTGAGCACCTCACCTGATGAGCCCGTGCCACGCAGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 ENST00000508645.5 |
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| CDS GCA 72 bp | TCAGAGAGGAATGGTTCAGGAAGACATGGGCCACTCTaGTGCTCCTTTTGTCTACATCCTGATAGGTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: SERNGSGRHGPL*CSFCLHPDRCR Trigger: TCTACACCTATCAGGATGTAGACAAAAGGAGCAGCAGAGTGGCCCATGTCTTCCTGAACCATTCCTCTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS CAA 90 bp | ATAGGTGTAGATGTCTCCCTCATAGATGATGAAAGGTTTCCGAGGTaGTCTTTTGGCATGACTCAAGAATTTATCCAGCACAGTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: IGVDVSLIDDERFPR*SFGMTQEFIQHSHQ Trigger: CTGGTGACTGTGCTGGATAAATTCTTGAGTCATGCCAAAAGACAACCTCGGAAACCTTTCATCATCTATGAGGGAGACATCTACACCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS GCA 72 bp | ATCCAACATTCCAATAACATCAGCAACCTCAGTGGTTaGGACATTTTCTCCTTTCCATCTGAAAGTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: IQHSNNISNLSG*DIFSFPSESVS Trigger: GGAGACACTTTCAGATGGAAAGGAGAAAATGTCGCAACCACTGAGGTTGCTGATGTTATTGGAATGTTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS CAA 72 bp | GATGTCTCCCTCATAGATGATGAAAGGTTTCCGAGGTaGTCTTTTGGCATGACTCAAGAATTTATCCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: DVSLIDDERFPR*SFGMTQEFIQH Trigger: GTGCTGGATAAATTCTTGAGTCATGCCAAAAGACAACCTCGGAAACCTTTCATCATCTATGAGGGAGACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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| CDS CAA 72 bp | ATTCTCTCCATACATCACTCCGTATGCCATTTCCAATaGCCAAACGCACCTTATGATCCTTTTCTCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: ILSIHHSVCHFQ*PNAPYDPFLLL Trigger: GAGAAGGAGAAAAGGATCATAAGGTGCGTTTGGCAATTGGAAATGGCATACGGAGTGATGTATGGAGAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000262462.9 ENST00000395266.5 ENST00000506176.1 |
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