RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC26A9 (Homo sapiens)

Ensembl gene IDs: ENSG00000174502

Ensembl transcript IDs: ENST00000340781.8, ENST00000367134.2, ENST00000367135.8, ENST00000461505.1, ENST00000469392.1, ENST00000491127.5

Found 691 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGAGTGAGCAGGAGGCTTGTCCATTGCGGCCAGGGCCTGACGGGTaGAGAGTGGGCTCACCAGACTCTCACTCCTGTAAGGGTAGCACC +
Preference number: 1 (lower is better)
Translates to: WSEQEACPLRPGPDG*RVGSPDSHSCKGST
Trigger: GGTGCTACCCTTACAGGAGTGAGAGTCTGGTGAGCCCACTCTTCACCCGTCAGGCCCTGGCCGCAATGGACAAGCCTCCTGCTCACTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR GCA 90 bp CATGCAGTTAGGGGATGTAGCGGATCCCTGGAGGACTTCCACCTTTaGCTACAGAAGGACCCCATTGTGTCTCTGGGCCACAGGCTGATA +
Preference number: 1 (lower is better)
Translates to: HAVRGCSGSLEDFHL*LQKDPIVSLGHRLI
Trigger: TATCAGCCTGTGGCCCAGAGACACAATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCCCCTAACTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR GCA 90 bp TCCCTCTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTaGAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCAACTC +
Preference number: 1 (lower is better)
Translates to: SLCLMCFQSYLHSGL*NPQTCGRSLPEPQL
Trigger: GAGTTGAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR TCA 90 bp CTGACACCATCTGACACCGAGCCGTGTGGGCTCTGGGACACTTTTTaGAGCTTGTACAGCAGGCCAGCACAGTTGTACTTGTCCTTCTGT +
Preference number: 1 (lower is better)
Translates to: LTPSDTEPCGLWDTF*SLYSRPAQLYLSFC
Trigger: ACAGAAGGACAAGTACAACTGTGCTGGCCTGCTGTACAAGCTTCAAAAAGTGTCCCAGAGCCCACACGGCTCGGTGTCAGATGGTGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR TCA 90 bp CAAGCCAGAGTCCTAACCAAGTTTATCCCTATGTCCGTGACAGCCTaGCACCATCTGACACCGAGCCGTGTGGGCTCTGGGACACTTTTT +
Preference number: 1 (lower is better)
Translates to: QARVLTKFIPMSVTA*HHLTPSRVGSGTLF
Trigger: AAAAAGTGTCCCAGAGCCCACACGGCTCGGTGTCAGATGGTGTCAGGCTGTCACGGACATAGGGATAAACTTGGTTAGGACTCTGGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR TCA 90 bp TCTTGGCCAGCACCCCCTCCTTTAACTCTAAGAAGACTTGTTAGCTaGCCAGCTCACTCAACACACAGACACACAACGCAGGTCTGGCTG +
Preference number: 1 (lower is better)
Translates to: SWPAPPPLTLRRLVS*PAHSTHRHTTQVWL
Trigger: CAGCCAGACCTGCGTTGTGTGTCTGTGTGTTGAGTGAGCTGGTCAGCTAACAAGTCTTCTTAGAGTTAAAGGAGGGGGTGCTGGCCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR TCA 90 bp GGCTCTTGTCCTCCTGGAATTTGGCACTTCGGGTGCTGGGCACGGTaGATCCCAGATAACATTGTCCTTCGCCTTCCAAGTTTTGAGTTC +
Preference number: 1 (lower is better)
Translates to: GSCPPGIWHFGCWAR*IPDNIVLRLPSFEF
Trigger: GAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAATTCCAGGAGGACAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR CCA 90 bp GCACAGTTGTACTTGTCCTTCTGTTTTTGGCTCACTCGTAAAAGCTaGAAGTCAAGGTGTCCTTCAGCTGCCAAGGACAGGGCAGAGGTG +
Preference number: 1 (lower is better)
Translates to: AQLYLSFCFWLTRKS*KSRCPSAAKDRAEV
Trigger: CACCTCTGCCCTGTCCTTGGCAGCTGAAGGACACCTTGACTTCCAGCTTTTACGAGTGAGCCAAAAACAGAAGGACAAGTACAACTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR CCA 90 bp AGCTTGTACAGCAGGCCAGCACAGTTGTACTTGTCCTTCTGTTTTTaGCTCACTCGTAAAAGCTGGAAGTCAAGGTGTCCTTCAGCTGCC +
Preference number: 1 (lower is better)
Translates to: SLYSRPAQLYLSFCF*LTRKSWKSRCPSAA
Trigger: GGCAGCTGAAGGACACCTTGACTTCCAGCTTTTACGAGTGAGCCAAAAACAGAAGGACAAGTACAACTGTGCTGGCCTGCTGTACAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR CCA 90 bp TCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTaGGGGTTAATGATTACTTGGGGGTTAAGGATCACTTCATCAAGT +
Preference number: 1 (lower is better)
Translates to: SRSLGQQSPSVLRLV*GLMITWGLRITSSS
Trigger: ACTTGATGAAGTGATCCTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR TCA 90 bp CCCCATTGTGTCTCTGGGCCACAGGCTGATAAGGAAGAGTTAACATaGTTGGCTCTTTGCCAGGTAAAGAAGGATAAGGCAGATTTACCA +
Preference number: 1 (lower is better)
Translates to: PHCVSGPQADKEELT*LALCQVKKDKADLP
Trigger: TGGTAAATCTGCCTTATCCTTCTTTACCTGGCAAAGAGCCAATCATGTTAACTCTTCCTTATCAGCCTGTGGCCCAGAGACACAATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR CCA 90 bp ATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTaGCTCTTGGCCAGCACCCCCTCCTTTAACTCTAAGAAGACTTGT +
Preference number: 1 (lower is better)
Translates to: IMNSQKSNAPGPRMC*LLASTPSFNSKKTC
Trigger: ACAAGTCTTCTTAGAGTTAAAGGAGGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR CCA 90 bp ATCCCAGATAACATTGTCCTTCGCCTTCCAAGTTTTGAGTTCCATTaGCAGCCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCT +
Preference number: 1 (lower is better)
Translates to: IPDNIVLRLPSFEFH*QPDGIMNSQKSNAP
Trigger: AGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp CCCTCTTTGGGGTTTCTAGCCAGCCTCCAGGGGAAGGGAGCAGCCTCTGAGGGCGATGTTTCAGGAGGCTaGGGCAGAACCTTAGTGGGC +
Preference number: 2 (lower is better)
Translates to: PSLGFLASLQGKGAASEGDVSGG*GRTLVG
Trigger: GCCCACTAAGGTTCTGCCTCAGCCTCCTGAAACATC...GCCCTCAGAGGCTGCTCCCTTCCCCTGGAGGCTGGCTAGAAACCCCAAAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCTCAAGGGGGACTGTCTaGGCCCAGGTCCCATCCGTT +
Preference number: 2 (lower is better)
Translates to: STAGSATLRHVADLSLSLSRGTV*AQVPSV
Trigger: AACGGATGGGACCTGGGCCCAGACAGTCCCCCTTGA...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCGGGCCAAGAATGTGTTaGCTCTTGGCCAGCACCCCC +
Preference number: 2 (lower is better)
Translates to: STAGSATLRHVADLSLSLGPRMC*LLASTP
Trigger: GGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCC...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp GGATGTAGCGGATCCCTGGAGGACTTCCACCTTTGCCTACAGAAGGACCCCATTAGGGAGGCATTTCCCTaGTGGGCCCTGGGGTCAAGG +
Preference number: 2 (lower is better)
Translates to: GCSGSLEDFHLCLQKDPIREAFP*WALGSR
Trigger: CCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCT...AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp TTCCCTGTGTTGGTACTAGCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAATTGCGGCCAGGGCCTaGCGGGTGAAGAGTGGGCTC +
Preference number: 2 (lower is better)
Translates to: FPVLVLAPSSPLSLWVQRIAARA*RVKSGL
Trigger: GAGCCCACTCTTCACCCGTCAGGCCCTGGCCGCAAT...TCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGCTAGTACCAACACAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR-3UTR CCA 90 bp TGGTCTCGACGGTCCTGGCCACTGTCCAGGCTAGAGTCTGATGTGCTTGCTGACCTAGACTCCTGGGTGTaGAGAGCACATGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: WSRRSWPLSRLESDVLADLDSWV*RAHGPW
Trigger: CCAGGGACCATGTGCTCTCCACACCCAGGAGTCTAG...GTCAGCAAGCACATCAGACTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp GCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAGCGGATCCCTGGAGGACTTTCCCTGATGGGCCCTaGGGTCAAGGGGGACTGTCT +
Preference number: 2 (lower is better)
Translates to: APFHICMQLGDVADPWRTFPDGP*GQGGLS
Trigger: AGACAGTCCCCCTTGACCCCAGGGCCCATCAGGGAA...AGTCCTCCAGGGATCCGCTACATCCCCTAACTGCATGCAGATGTGGAAAGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp AAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCCTGGGGTCAAGGGGCACCCTCTTCCCCTCTaGGTCTCTGGGTGCAAAGAG +
Preference number: 2 (lower is better)
Translates to: KADLPKGGISLMGPGVKGHPLPL*VSGCKE
Trigger: CTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTG...CCCCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp AGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGCCCACCTCCTGGGCCTaGGCTGGACTTGGAAGGAGG +
Preference number: 2 (lower is better)
Translates to: RSLGQQSPSVLRLVWGLMPTSWA*AGLGRR
Trigger: CCTCCTTCCAAGTCCAGCTCAGGCCCAGGAGGTGGG...CATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp AAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCCTGGGGTCAAGGGGATGTCCGTGACAGCCTaGCACCATCTGACACCGAGC +
Preference number: 2 (lower is better)
Translates to: KADLPKGGISLMGPGVKGMSVTA*HHLTPS
Trigger: GCTCGGTGTCAGATGGTGTCAGGCTGTCACGGACAT...CCCCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR-3UTR GCA 90 bp CAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCGGCTCTCTCTGGAGATaGGGGGAGGGAAGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: QSYLHSGLCNPQTCGRSLGSLWR*GEGRKG
Trigger: TCCCTTCCTTCCCTCCCCGCATCTCCAGAGAGAGCC...GAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR-3UTR CCA 90 bp CAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGTGGTCTCGACGGTCCTaGCCACTGTCCAGGCTAGAG +
Preference number: 2 (lower is better)
Translates to: QLQVTGSTISFSSEAGLGWSRRS*PLSRLE
Trigger: CTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA...CCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp CAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCTGGTCTCGACGGTCCTaGCCACTGTCCAGGCTAGAG +
Preference number: 2 (lower is better)
Translates to: QSYLHSGLCNPQTCGRSLWSRRS*PLSRLE
Trigger: CTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA...GAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp GGATGTAGCGGATCCCTGGAGGACTTCCACCTTTGCCTACAGAAGGACCCCATTTCAAGGGGGACTGTCTaGGCCCAGGTCCCATCCGTT +
Preference number: 2 (lower is better)
Translates to: GCSGSLEDFHLCLQKDPISRGTV*AQVPSV
Trigger: AACGGATGGGACCTGGGCCCAGACAGTCCCCCTTGA...AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp GGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCAACTCCAGGATGTAGCGGATCCCTaGAGGACTTCCACCTTTGCC +
Preference number: 2 (lower is better)
Translates to: GLCNPQTCGRSLPEPQLQDVADP*RTSTFA
Trigger: GGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATC...CTGGAGTTGAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp CAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCTAGACTCCTGGGTGTaGAGAGCACATGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: QSYLHSGLCNPQTCGRSLLDSWV*RAHGPW
Trigger: CCAGGGACCATGTGCTCTCCACACCCAGGAGTCTAG...GAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCCTTCATAGGAGAAGATaGCCTGAGGTCCTAAGGGTG +
Preference number: 2 (lower is better)
Translates to: STAGSATLRHVADLSLSLLHRRR*PEVLRV
Trigger: CACCCTTAGGACCTCAGGCCATCTTCTCCTATGAAG...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp AGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGGCCAGCACCCCCTCAAGGCCTAGACTCCTaGGTGTGGAGAGCACATGGT +
Preference number: 2 (lower is better)
Translates to: RKAMLLGQECVGSWPAPPQGLDS*VWRAHG
Trigger: ACCATGTGCTCTCCACACCCAGGAGTCTAGGCCTTG...AGGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp AGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGGCCAGCACCCCCTACAGCAGTGGTGGTTTaGGCAGCCTTGGGGATGATG +
Preference number: 2 (lower is better)
Translates to: RKAMLLGQECVGSWPAPPTAVVV*AALGMM
Trigger: CATCATCCCCAAGGCTGCCCAAACCACCACTGCTGT...AGGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCGGGGATCTAGATACTTaGTTCAAAGGGGACTCTGAC +
Preference number: 2 (lower is better)
Translates to: STAGSATLRHVADLSLSLGDLDT*FKGDSD
Trigger: GTCAGAGTCCCCTTTGAACCAAGTATCTAGATCCCC...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp GGATGTAGCGGATCCCTGGAGGACTTCCACCTTTGCCTACAGAAGGACCCCATTCTGACGGGTGAAGAGTaGGCTCACCAGACTCTCACT +
Preference number: 2 (lower is better)
Translates to: GCSGSLEDFHLCLQKDPILTGEE*AHQTLT
Trigger: AGTGAGAGTCTGGTGAGCCCACTCTTCACCCGTCAG...AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR-3UTR TCA 90 bp TTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACATCAGCCTGACACCATCTaGCACCGAGCCGTGTGGGCT +
Preference number: 2 (lower is better)
Translates to: LKSLPVQEDPIWISPFPHQPDTI*HRAVWA
Trigger: AGCCCACACGGCTCGGTGTCAGATGGTGTCAGGCTG...ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR-3UTR CCA 90 bp GCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAAAGTTTTGGTGTGGAGAGCACATaGTCCCTGGGTGCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: APSSPLSLWVQRGIPKSFGVEST*SLGAEL
Trigger: CAGCTCTGCACCCAGGGACCATGTGCTCTCCACACC...AAAACTTTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp TGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACACAAGGCCTAGACTCCTaGGTGTGGAGAGCACATGGT +
Preference number: 2 (lower is better)
Translates to: CLMCFQSYLHSGLCNPQTQGLDS*VWRAHG
Trigger: ACCATGTGCTCTCCACACCCAGGAGTCTAGGCCTTG...TGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp GTTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACATGGTCTCGACGGTCCTaGCCACTGTCCAGGCTAGAG +
Preference number: 2 (lower is better)
Translates to: VKESSCAGRPNLDQPLSTWSRRS*PLSRLE
Trigger: CTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA...TGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp AAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCCTGGGGTCAAGGGGCAGGAAGACCCAATCTaGATCAGCCCCTTTCCACAT +
Preference number: 2 (lower is better)
Translates to: KADLPKGGISLMGPGVKGQEDPI*ISPFPH
Trigger: ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTG...CCCCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp GTTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACAGGGCCAAGAATGTGTTaGCTCTTGGCCAGCACCCCC +
Preference number: 2 (lower is better)
Translates to: VKESSCAGRPNLDQPLSTGPRMC*LLASTP
Trigger: GGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCC...TGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp GAAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTGATGTTTCAGGAGGCTaGGGCAGAACCTTAGTGGGC +
Preference number: 2 (lower is better)
Translates to: EDPIWISPFPHLHAVRGCDVSGG*GRTLVG
Trigger: GCCCACTAAGGTTCTGCCTCAGCCTCCTGAAACATC...ACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp GCCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGAGGGAGGCATTTCCCTaGTGGGCCCTGGGGTCAAGG +
Preference number: 2 (lower is better)
Translates to: ARWHNEFTEKQCSWAKNVREAFP*WALGSR
Trigger: CCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCT...CACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR GCA 90 bp CAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCGCCCCTTTCCACATCTaGATGCAGTTAGGGGATGTA +
Preference number: 2 (lower is better)
Translates to: QSYLHSGLCNPQTCGRSLAPFHI*MQLGDV
Trigger: TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGC...GAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp AATGTCTTCCCTCTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGACAGCAGTGGTGGTTTaGGCAGCCTTGGGGATGATG +
Preference number: 2 (lower is better)
Translates to: NVFPLPHVFPILPPQRALTAVVV*AALGMM
Trigger: CATCATCCCCAAGGCTGCCCAAACCACCACTGCTGT...CAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAGAGGGAAGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp AGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGGATGTAGCGGATCCCTaGAGGACTTCCACCTTTGCC +
Preference number: 2 (lower is better)
Translates to: RSLGQQSPSVLRLVWGLMDVADP*RTSTFA
Trigger: GGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATC...CATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp GGATGTAGCGGATCCCTGGAGGACTTCCACCTTTGCCTACAGAAGGACCCCATTCAGGAAGACCCAATCTaGATCAGCCCCTTTCCACAT +
Preference number: 2 (lower is better)
Translates to: GCSGSLEDFHLCLQKDPIQEDPI*ISPFPH
Trigger: ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTG...AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp CTCTCCCTGAGCCTCAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGTCGCCTTCCAAGTTTTaGGTTCCATTGGCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: LSLSLNSRSLGQQSPSVLSPSKF*VPLAAR
Trigger: TCTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGA...CAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTGAGGCTCAGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp TGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATCGCCTTCCAAGTTTTaGGTTCCATTGGCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: CLMCFQSYLHSGLCNPQTSPSKF*VPLAAR
Trigger: TCTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGA...TGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR GCA 90 bp TGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACAGAGGACTTCCACCTTTaGCTACAGAAGGACCCCATT +
Preference number: 2 (lower is better)
Translates to: CLMCFQSYLHSGLCNPQTEDFHL*LQKDPI
Trigger: AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTC...TGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR GCA 90 bp CTCTCCCTGAGCCTCAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGGCCCCTTTCCACATCTaGATGCAGTTAGGGGATGTA +
Preference number: 2 (lower is better)
Translates to: LSLSLNSRSLGQQSPSVLAPFHI*MQLGDV
Trigger: TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGC...CAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTGAGGCTCAGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp TCCCAGATAACATTGTCCTTCGCCTTCCAAGTTTTGAGTTCCATTGGCAGCCAGAGAGCACATGGTCCCTaGGTGCAGAGCTGCCAGAGA +
Preference number: 2 (lower is better)
Translates to: SQITLSFAFQVLSSIGSQRAHGP*VQSCQR
Trigger: TCTCTGGCAGCTCTGCACCCAGGGACCATGTGCTCT...CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp CAGGTAAAGAAGGATAAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCTAGACTCCTGGGTGTaGAGAGCACATGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: QVKKDKADLPKGGISLMGLDSWV*RAHGPW
Trigger: CCAGGGACCATGTGCTCTCCACACCCAGGAGTCTAG...GCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTTATCCTTCTTTACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp AATGTCTTCCCTCTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGTCCCCTCTGAGTCTCTaGGTGCAAAGAGGAATTCCC +
Preference number: 2 (lower is better)
Translates to: NVFPLPHVFPILPPQRALSPLSL*VQRGIP
Trigger: GGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGA...CAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAGAGGGAAGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp GAAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTTCCCCTCTGAGTCTCTaGGTGCAAAGAGGAATTCCC +
Preference number: 2 (lower is better)
Translates to: EDPIWISPFPHLHAVRGCSPLSL*VQRGIP
Trigger: GGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGA...ACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp GCCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTCCCTGATGGGCCCTaGGGTCAAGGGGGACTGTCT +
Preference number: 2 (lower is better)
Translates to: ARWHNEFTEKQCSWAKNVFPDGP*GQGGLS
Trigger: AGACAGTCCCCCTTGACCCCAGGGCCCATCAGGGAA...CACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp GGTGGAGTAGGGGAGAGTGAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAACAGGAAGACCCAATCTaGATCAGCCCCTTTCCACAT +
Preference number: 2 (lower is better)
Translates to: GGVGESELSLAKALVLLEQEDPI*ISPFPH
Trigger: ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTG...TTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTCACTCTCCCCTACTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCGAAAAGCAATGCTCCTaGGCCAAGAATGTGTTGGCT +
Preference number: 2 (lower is better)
Translates to: FGTSGAGHGESQITLSFAEKQCS*AKNVLA
Trigger: AGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTC...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp GGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCAACTCCAGAGTTTTGAGTTCCATTaGCAGCCAGATGGCATAATG +
Preference number: 2 (lower is better)
Translates to: GLCNPQTCGRSLPEPQLQSFEFH*QPDGIM
Trigger: CATTATGCCATCTGGCTGCCAATGGAACTCAAAACT...CTGGAGTTGAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR CAA 90 bp GAATTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATaGTCCTTCGCCTTCCAAGTTTTGAGTTCCATTGGCAGCCAGATG +
Preference number: 2 (lower is better)
Translates to: EFGTSGAGHGESQIT*SFAFQVLSSIGSQM
Trigger: CATCTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp GAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGGATCACTTCATCAAGGATGTTTCAGGAGGCTaGGGCAGAACCTTAGTGGGC +
Preference number: 2 (lower is better)
Translates to: EAGLGVNDYLGVKDHFIKDVSGG*GRTLVG
Trigger: GCCCACTAAGGTTCTGCCTCAGCCTCCTGAAACATC...CTTGATGAAGTGATCCTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR GCA 90 bp AGAGATAAGGTTCCCAGTCCTCCCTGGGAATTATATTATCACAGGTCAGTATCAAGGAGGCTTGTCCATTaGGGCCAGGGCCTGACGGGT +
Preference number: 2 (lower is better)
Translates to: RDKVPSPPWELYYHRSVSRRLVH*GQGLTG
Trigger: ACCCGTCAGGCCCTGGCCGCAATGGACAAGCCTCCT...TGATACTGACCTGTGATAATATAATTCCCAGGGAGGACTGGGAACCTTATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR-3UTR CCA 90 bp TCCCAGATAACATTGTCCTTCGCCTTCCAAGTTTTGAGTTCCATTGGCAGCCAGACAGCAGTGGTGGTTTaGGCAGCCTTGGGGATGATG +
Preference number: 2 (lower is better)
Translates to: SQITLSFAFQVLSSIGSQTAVVV*AALGMM
Trigger: CATCATCCCCAAGGCTGCCCAAACCACCACTGCTGT...CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp AATGTCTTCCCTCTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCTTCATAGGAGAAGATaGCCTGAGGTCCTAAGGGTG +
Preference number: 2 (lower is better)
Translates to: NVFPLPHVFPILPPQRALLHRRR*PEVLRV
Trigger: CACCCTTAGGACCTCAGGCCATCTTCTCCTATGAAG...CAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAGAGGGAAGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp CTCTCCCTGAGCCTCAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGGGGGATCTAGATACTTaGTTCAAAGGGGACTCTGAC +
Preference number: 2 (lower is better)
Translates to: LSLSLNSRSLGQQSPSVLGDLDT*FKGDSD
Trigger: GTCAGAGTCCCCTTTGAACCAAGTATCTAGATCCCC...CAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTGAGGCTCAGGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp AGAGATAAGGTTCCCAGTCCTCCCTGGGAATTATATTATCACAGGTCAGTATCAGGTGTGGAGAGCACATaGTCCCTGGGTGCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: RDKVPSPPWELYYHRSVSGVEST*SLGAEL
Trigger: CAGCTCTGCACCCAGGGACCATGTGCTCTCCACACC...TGATACTGACCTGTGATAATATAATTCCCAGGGAGGACTGGGAACCTTATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp TCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCATCAAGGGGGACTGTCTaGGCCCAGGTCCCATCCGTT +
Preference number: 2 (lower is better)
Translates to: SFLLQPGPEECSFPNIPASRGTV*AQVPSV
Trigger: AACGGATGGGACCTGGGCCCAGACAGTCCCCCTTGA...TGCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp GAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGGATCACTTCATCAAGGAATGTGTTGGCTCTTaGCCAGCACCCCCTCCTTTA +
Preference number: 2 (lower is better)
Translates to: EAGLGVNDYLGVKDHFIKECVGS*PAPPPL
Trigger: TAAAGGAGGGGGTGCTGGCCAAGAGCCAACACATTC...CTTGATGAAGTGATCCTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp CTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTCCATTGGCAGCCAGATaGCATAATGAATTCACAGAA +
Preference number: 2 (lower is better)
Translates to: LQVTGSTISFSSEAGLGVPLAAR*HNEFTE
Trigger: TTCTGTGAATTCATTATGCCATCTGGCTGCCAATGG...AACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp ATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGCAGGCTCATCCTTTATaGAAGTCCCAAGTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: ISFSSEAGLGVNDYLGVKQAHPL*KSQVPG
Trigger: GCCTGGCACTTGGGACTTCCATAAAGGATGAGCCTG...CTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR-3UTR CCA 90 bp CCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTGAGGAACCCAAGCTCTaGGGGATGCACTTTCCTCCG +
Preference number: 2 (lower is better)
Translates to: PDGIMNSQKSNAPGPRMCEEPKL*GMHFPP
Trigger: CGGAGGAAAGTGCATCCCCCAGAGCTTGGGTTCCTC...ACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR-3UTR TCA 90 bp ATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCCACCCTCTTCCCCTCTaGGTCTCTGGGTGCAAAGAG +
Preference number: 2 (lower is better)
Translates to: IFPASTRSRRVFFSKYSSHPLPL*VSGCKE
Trigger: CTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTG...GCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp CTCTCCCTGAGCCTCAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAAGGAAGAGTTAACATaGTTGGCTCTTTGCCAGGTA +
Preference number: 2 (lower is better)
Translates to: LSLSLNSRSLGQQSPSVLKEELT*LALCQV
Trigger: TACCTGGCAAAGAGCCAATCATGTTAACTCTTCCTT...CAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTGAGGCTCAGGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp GTTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACAAGAAGACTTGTTAGCTaGCCAGCTCACTCAACACAC +
Preference number: 2 (lower is better)
Translates to: VKESSCAGRPNLDQPLSTRRLVS*PAHSTH
Trigger: GTGTGTTGAGTGAGCTGGTCAGCTAACAAGTCTTCT...TGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR GCA 90 bp GGATGTAGCGGATCCCTGGAGGACTTCCACCTTTGCCTACAGAAGGACCCCATTTATCTATTACTAGGATaGCAGATGATTCTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: GCSGSLEDFHLCLQKDPIYLLLG*QMILPA
Trigger: AGCTGGCAGAATCATCTGGCATCCTAGTAATAGATA...AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR GCA 90 bp TATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGGAGGACTTCCACCTTTaGCTACAGAAGGACCCCATT +
Preference number: 2 (lower is better)
Translates to: YLLLGCQMILPATHPPLWEDFHL*LQKDPI
Trigger: AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTC...CCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp TCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCAAGAGCACATGGTCCCTaGGTGCAGAGCTGCCAGAGA +
Preference number: 2 (lower is better)
Translates to: SFLLQPGPEECSFPNIPARAHGP*VQSCQR
Trigger: TCTCTGGCAGCTCTGCACCCAGGGACCATGTGCTCT...TGCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp ATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCAGAGCACATGGTCCCTaGGTGCAGAGCTGCCAGAGA +
Preference number: 2 (lower is better)
Translates to: IFPASTRSRRVFFSKYSSRAHGP*VQSCQR
Trigger: TCTCTGGCAGCTCTGCACCCAGGGACCATGTGCTCT...GCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp GGTGGAGTAGGGGAGAGTGAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAACCATTGGCAGCCAGATaGCATAATGAATTCACAGAA +
Preference number: 2 (lower is better)
Translates to: GGVGESELSLAKALVLLEPLAAR*HNEFTE
Trigger: TTCTGTGAATTCATTATGCCATCTGGCTGCCAATGG...TTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTCACTCTCCCCTACTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp AATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCGGGTTAATGATTACTTaGGGGTTAAGGATCACTTCA +
Preference number: 2 (lower is better)
Translates to: NLTSTAGSATLRHVADLSGLMIT*GLRITS
Trigger: TGAAGTGATCCTTAACCCCCAAGTAATCATTAACCC...GGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp AGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGAAGGAAGAGTTAACATaGTTGGCTCTTTGCCAGGTA +
Preference number: 2 (lower is better)
Translates to: RSLGQQSPSVLRLVWGLMKEELT*LALCQV
Trigger: TACCTGGCAAAGAGCCAATCATGTTAACTCTTCCTT...CATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp GAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGGATCACTTCATCAAGAGAAGACTTGTTAGCTaGCCAGCTCACTCAACACAC +
Preference number: 2 (lower is better)
Translates to: EAGLGVNDYLGVKDHFIKRRLVS*PAHSTH
Trigger: GTGTGTTGAGTGAGCTGGTCAGCTAACAAGTCTTCT...CTTGATGAAGTGATCCTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR GCA 90 bp TGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATATCTATTACTAGGATaGCAGATGATTCTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: CLMCFQSYLHSGLCNPQTYLLLG*QMILPA
Trigger: AGCTGGCAGAATCATCTGGCATCCTAGTAATAGATA...TGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR GCA 90 bp ATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGAAGGTGTCCTTCAGCTaGCAAGGACAGGGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: IMNSQKSNAPGPRMCWLLKVSFS*QGQGRG
Trigger: ACCTCTGCCCTGTCCTTGGCAGCTGAAGGACACCTT...CAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR-3UTR CCA 90 bp ATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGCAAGGCCTAGACTCCTaGGTGTGGAGAGCACATGGT +
Preference number: 2 (lower is better)
Translates to: IMNSQKSNAPGPRMCWLLQGLDS*VWRAHG
Trigger: ACCATGTGCTCTCCACACCCAGGAGTCTAGGCCTTG...CAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp AAAAGTTTTGTGCAGAATAACTGGTATCTATTACTAGGATGCCAGATGATTCTGAGGGAGGCATTTCCCTaGTGGGCCCTGGGGTCAAGG +
Preference number: 2 (lower is better)
Translates to: KSFVQNNWYLLLGCQMILREAFP*WALGSR
Trigger: CCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCT...CAGAATCATCTGGCATCCTAGTAATAGATACCAGTTATTCTGCACAAAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp AAAAGCATTGAAATTCTGGATTATTTCACTACTTTGCCTCCATCTTTCCTGCTTGCCCGACACCCCCTGTaGCCCCAGGCTCATCCTTTA +
Preference number: 2 (lower is better)
Translates to: KSIEILDYFTTLPPSFLLARHPL*PQAHPL
Trigger: TAAAGGATGAGCCTGGGGTCACAGGGGGTGTCGGGC...AAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAATCCAGAATTTCAATGCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR-3UTR CCA 90 bp ATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCTCCCCTCTGAGTCTCTaGGTGCAAAGAGGAATTCCC +
Preference number: 2 (lower is better)
Translates to: IFPASTRSRRVFFSKYSSSPLSL*VQRGIP
Trigger: GGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGA...GCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp ATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCGAATGTGTTGGCTCTTaGCCAGCACCCCCTCCTTTA +
Preference number: 2 (lower is better)
Translates to: IFPASTRSRRVFFSKYSSECVGS*PAPPPL
Trigger: TAAAGGAGGGGGTGCTGGCCAAGAGCCAACACATTC...GCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp CAGGTAAAGAAGGATAAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCTCACTCGTAAAAGCTaGAAGTCAAGGTGTCCTTCA +
Preference number: 2 (lower is better)
Translates to: QVKKDKADLPKGGISLMGLTRKS*KSRCPS
Trigger: TGAAGGACACCTTGACTTCCAGCTTTTACGAGTGAG...GCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTTATCCTTCTTTACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR-3UTR CCA 90 bp GCCTCCATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATGTTCTGAGGCTGGTCTaGGGGTTAATGATTACTTGG +
Preference number: 2 (lower is better)
Translates to: ASIFPASTRSRRVFFSKYVLRLV*GLMITW
Trigger: CCAAGTAATCATTAACCCCCAGACCAGCCTCAGAAC...ATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGATGGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR GCA 90 bp TTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACATTATCTATTACTAGGATaGCAGATGATTCTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: LKSLPVQEDPIWISPFPHYLLLG*QMILPA
Trigger: AGCTGGCAGAATCATCTGGCATCCTAGTAATAGATA...ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp CACATGGAACCTATTTATTTTCAAGTCAACAGTAGGGTTCCTCTCAATACCTCCCTTCATAGGAGAAGATaGCCTGAGGTCCTAAGGGTG +
Preference number: 2 (lower is better)
Translates to: HMEPIYFQVNSRVPLNTSLHRRR*PEVLRV
Trigger: CACCCTTAGGACCTCAGGCCATCTTCTCCTATGAAG...GGAGGTATTGAGAGGAACCCTACTGTTGACTTGAAAATAAATAGGTTCCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp ATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCAAGGGGACTCTGACTTaGAAATTCCTGAGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: IFPASTRSRRVFFSKYSSKGTLT*KFLRLC
Trigger: ACAGAGCCTCAGGAATTTCCAAGTCAGAGTCCCCTT...GCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CCA 90 bp GAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGGATCACTTCATCAAGGGGTTAATGATTACTTaGGGGTTAAGGATCACTTCA +
Preference number: 2 (lower is better)
Translates to: EAGLGVNDYLGVKDHFIKGLMIT*GLRITS
Trigger: TGAAGTGATCCTTAACCCCCAAGTAATCATTAACCC...CTTGATGAAGTGATCCTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR GCA 90 bp AAAAGTTTTGTGCAGAATAACTGGTATCTATTACTAGGATGCCAGATGATTCTGTATGGAAGTCCCAAGTaGCAGGCACTCTGTAGGCAG +
Preference number: 2 (lower is better)
Translates to: KSFVQNNWYLLLGCQMILYGSPK*QALCRQ
Trigger: CTGCCTACAGAGTGCCTGGCACTTGGGACTTCCATA...CAGAATCATCTGGCATCCTAGTAATAGATACCAGTTATTCTGCACAAAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR-3UTR TCA 90 bp CACATGGAACCTATTTATTTTCAAGTCAACAGTAGGGTTCCTCTCAATACCTCCAAGGAAGAGTTAACATaGTTGGCTCTTTGCCAGGTA +
Preference number: 2 (lower is better)
Translates to: HMEPIYFQVNSRVPLNTSKEELT*LALCQV
Trigger: TACCTGGCAAAGAGCCAATCATGTTAACTCTTCCTT...GGAGGTATTGAGAGGAACCCTACTGTTGACTTGAAAATAAATAGGTTCCATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR TCA 90 bp CACATGGAACCTATTTATTTTCAAGTCAACAGTAGGGTTCCTCTCAATACCTCCAAGGGGTTGTTAAGCTaGAGAAGCTTGAGAAAAGCA +
Preference number: 2 (lower is better)
Translates to: HMEPIYFQVNSRVPLNTSKGLLS*RSLRKA
Trigger: TGCTTTTCTCAAGCTTCTTCAGCTTAACAACCCCTT...GGAGGTATTGAGAGGAACCCTACTGTTGACTTGAAAATAAATAGGTTCCATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR TCA 72 bp GGAGCAGCCTCTGAGGGCAGTGATGTTTCAGGAGGCTaGGGCAGAACCTTAGTGGGCTGTCCCCGGGGAGGT +
Preference number: 3 (lower is better)
Translates to: GAASEGSDVSGG*GRTLVGCPRGG
Trigger: ACCTCCCCGGGGACAGCCCACTAAGGTTCTGCCTCAGCCTCCTGAAACATCACTGCCCTCAGAGGCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR CCA 72 bp GGGGCGCATAGTTACCAAGGCCTAGACTCCTGGGTGTaGAGAGCACATGGTCCCTGGGTGCAGAGCTGCCAG +
Preference number: 3 (lower is better)
Translates to: GAHSYQGLDSWV*RAHGPWVQSCQ
Trigger: CTGGCAGCTCTGCACCCAGGGACCATGTGCTCTCCACACCCAGGAGTCTAGGCCTTGGTAACTATGCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR TCA 72 bp CAGGAGGCTTGTCCATTGCGGCCAGGGCCTGACGGGTaGAGAGTGGGCTCACCAGACTCTCACTCCTGTAAG +
Preference number: 3 (lower is better)
Translates to: QEACPLRPGPDG*RVGSPDSHSCK
Trigger: CTTACAGGAGTGAGAGTCTGGTGAGCCCACTCTTCACCCGTCAGGCCCTGGCCGCAATGGACAAGCCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR CCA 72 bp AGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCCTaGGGTCAAGGGGGACTGTCTGGGCCCAGGTCCCAT +
Preference number: 3 (lower is better)
Translates to: RFTKGRHFPDGP*GQGGLSGPRSH
Trigger: ATGGGACCTGGGCCCAGACAGTCCCCCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCTTTGGTAAATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR CCA 72 bp CTTGTCCATTGCGGCCAGGGCCTGACGGGTGAAGAGTaGGCTCACCAGACTCTCACTCCTGTAAGGGTAGCA +
Preference number: 3 (lower is better)
Translates to: LVHCGQGLTGEE*AHQTLTPVRVA
Trigger: TGCTACCCTTACAGGAGTGAGAGTCTGGTGAGCCCACTCTTCACCCGTCAGGCCCTGGCCGCAATGGACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR-3UTR CAA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCGGAGGACTTCCACCTTaGCCTACAGAAGGACCCCAT +
Preference number: 3 (lower is better)
Translates to: STAGSATLRHVADLSLSLGGLPP*PTEGPH
Trigger: ATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCC...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp CTGGTATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTCAGGAGGCTTGTCCATaGCGGCCAGGGCCTGACGGG +
Preference number: 3 (lower is better)
Translates to: LVSITRMPDDSASYPSPSQEACP*RPGPDG
Trigger: CCCGTCAGGCCCTGGCCGCAATGGACAAGCCTCCTG...AGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR GCA 72 bp AGGGGATGTAGCGGATCCCTGGAGGACTTCCACCTTTaGCTACAGAAGGACCCCATTGTGTCTCTGGGCCAC +
Preference number: 3 (lower is better)
Translates to: RGCSGSLEDFHL*LQKDPIVSLGH
Trigger: GTGGCCCAGAGACACAATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR CCA 72 bp TTACCAAGGCCTAGACTCCTGGGTGTGGAGAGCACATaGTCCCTGGGTGCAGAGCTGCCAGAGACAGAGTTG +
Preference number: 3 (lower is better)
Translates to: LPRPRLLGVEST*SLGAELPETEL
Trigger: CAACTCTGTCTCTGGCAGCTCTGCACCCAGGGACCATGTGCTCTCCACACCCAGGAGTCTAGGCCTTGGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCGACAGCAGTGGTGGTTaGGGCAGCCTTGGGGATGAT +
Preference number: 3 (lower is better)
Translates to: FGTSGAGHGESQITLSFADSSGG*GSLGDD
Trigger: ATCATCCCCAAGGCTGCCCAAACCACCACTGCTGTC...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp TGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGGGCCAAGAATGTGTaGGCTCTTGGCCAGCACCCC +
Preference number: 3 (lower is better)
Translates to: CLMCFQSYLHSGLCNPQTWAKNV*ALGQHP
Trigger: GGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCA...TGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR TCA 72 bp GTCCTAACCAAGTTTATCCCTATGTCCGTGACAGCCTaGCACCATCTGACACCGAGCCGTGTGGGCTCTGGG +
Preference number: 3 (lower is better)
Translates to: VLTKFIPMSVTA*HHLTPSRVGSG
Trigger: CCCAGAGCCCACACGGCTCGGTGTCAGATGGTGTCAGGCTGTCACGGACATAGGGATAAACTTGGTTAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR GCA 72 bp TGTGACCCCAGGCTCATCCTTTATGGAAGTCCCAAGTaGCAGGCACTCTGTAGGCAGCATGAGGACTGGCTG +
Preference number: 3 (lower is better)
Translates to: CDPRLILYGSPK*QALCRQHEDWL
Trigger: CAGCCAGTCCTCATGCTGCCTACAGAGTGCCTGGCACTTGGGACTTCCATAAAGGATGAGCCTGGGGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR-3UTR CAA 90 bp CACCATCTGACACCGAGCCGTGTGGGCTCTGGGACACTTTTTGAAGCTTGTACAGACAGCAGTGGTGGTTaGGGCAGCCTTGGGGATGAT +
Preference number: 3 (lower is better)
Translates to: HHLTPSRVGSGTLFEACTDSSGG*GSLGDD
Trigger: ATCATCCCCAAGGCTGCCCAAACCACCACTGCTGTC...TGTACAAGCTTCAAAAAGTGTCCCAGAGCCCACACGGCTCGGTGTCAGATGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR CCA 72 bp CACATCTGCATGCAGTTAGGGGATGTAGCGGATCCCTaGAGGACTTCCACCTTTGCCTACAGAAGGACCCCA +
Preference number: 3 (lower is better)
Translates to: HICMQLGDVADP*RTSTFAYRRTP
Trigger: TGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCCCCTAACTGCATGCAGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCTCCGTTTTCCCTGTGTaGGTACTAGCACCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: FGTSGAGHGESQITLSFASVFPV*VLAPSS
Trigger: GGAAGAGGGTGCTAGTACCAACACAGGGAAAACGGA...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp GGTGGAGTAGGGGAGAGTGAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAAGGAGGACTTCCACCTTaGCCTACAGAAGGACCCCAT +
Preference number: 3 (lower is better)
Translates to: GGVGESELSLAKALVLLEGGLPP*PTEGPH
Trigger: ATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCC...TTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTCACTCTCCCCTACTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCGAATCCCAGATAACATaGTCCTTCGCCTTCCAAGTT +
Preference number: 3 (lower is better)
Translates to: STAGSATLRHVADLSLSLESQIT*SFAFQV
Trigger: AACTTGGAAGGCGAAGGACAATGTTATCTGGGATTC...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCGCTCTGGGACACTTTTaGAAGCTTGTACAGCAGGCC +
Preference number: 3 (lower is better)
Translates to: FGTSGAGHGESQITLSFAALGHF*KLVQQA
Trigger: GGCCTGCTGTACAAGCTTCAAAAAGTGTCCCAGAGC...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR TCA 72 bp CCTCCTGGAATTTGGCACTTCGGGTGCTGGGCACGGTaGATCCCAGATAACATTGTCCTTCGCCTTCCAAGT +
Preference number: 3 (lower is better)
Translates to: PPGIWHFGCWAR*IPDNIVLRLPS
Trigger: ACTTGGAAGGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAATTCCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR TCA 72 bp TCTGACACCGAGCCGTGTGGGCTCTGGGACACTTTTTaGAGCTTGTACAGCAGGCCAGCACAGTTGTACTTG +
Preference number: 3 (lower is better)
Translates to: SDTEPCGLWDTF*SLYSRPAQLYL
Trigger: CAAGTACAACTGTGCTGGCCTGCTGTACAAGCTTCAAAAAGTGTCCCAGAGCCCACACGGCTCGGTGTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR GCA 72 bp CTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTaGAACCCTCAGACATGTGGCAGATCTCTCCCTGAG +
Preference number: 3 (lower is better)
Translates to: LMCFQSYLHSGL*NPQTCGRSLPE
Trigger: CTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp GAAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAGAATGTGTTGGCTCTaGGCCAGCACCCCCTCCTTT +
Preference number: 3 (lower is better)
Translates to: EDPIWISPFPHLHAVRGCRMCWL*ASTPSF
Trigger: AAAGGAGGGGGTGCTGGCCAAGAGCCAACACATTCT...ACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp AGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGAGAATGTGTTGGCTCTaGGCCAGCACCCCCTCCTTT +
Preference number: 3 (lower is better)
Translates to: RSLGQQSPSVLRLVWGLMRMCWL*ASTPSF
Trigger: AAAGGAGGGGGTGCTGGCCAAGAGCCAACACATTCT...CATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp CAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGTTCGCCTTCCAAGTTTaGAGTTCCATTGGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: QLQVTGSTISFSSEAGLGFAFQV*SSIGSQ
Trigger: CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAA...CCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp GCCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGTCCTCCTGGAATTaGGCACTTCGGGTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: ARWHNEFTEKQCSWAKNVLSSWN*ALRVLG
Trigger: GCCCAGCACCCGAAGTGCCAAATTCCAGGAGGACAA...CACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp AATGTCTTCCCTCTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGAAAGGGGACTCTGACTaGGAAATTCCTGAGGCTCTG +
Preference number: 3 (lower is better)
Translates to: NVFPLPHVFPILPPQRALKGDSD*EIPEAL
Trigger: CAGAGCCTCAGGAATTTCCAAGTCAGAGTCCCCTTT...CAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAGAGGGAAGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp CAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCGGGGTTAATGATTACTaGGGGGTTAAGGATCACTTC +
Preference number: 3 (lower is better)
Translates to: QSYLHSGLCNPQTCGRSLGVNDY*GVKDHF
Trigger: GAAGTGATCCTTAACCCCCAAGTAATCATTAACCCC...GAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp GGTGGAGTAGGGGAGAGTGAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAACCAGCACAGTTGTACTaGTCCTTCTGTTTTTGGCTC +
Preference number: 3 (lower is better)
Translates to: GGVGESELSLAKALVLLEPAQLY*SFCFWL
Trigger: GAGCCAAAAACAGAAGGACAAGTACAACTGTGCTGG...TTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTCACTCTCCCCTACTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR CCA 72 bp TCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTaGCTCTTGGCCAGCACCCCCTCCTTTAACTCTAAG +
Preference number: 3 (lower is better)
Translates to: SQKSNAPGPRMC*LLASTPSFNSK
Trigger: CTTAGAGTTAAAGGAGGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp GCCTCCATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTACCCATCCCCCTCTTaGGGGTTTCTAGCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: ASIFPASTRSRRVFFSKYYPSPS*GFLASL
Trigger: GAGGCTGGCTAGAAACCCCAAAGAGGGGGATGGGTA...ATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGATGGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp TCCCAGATAACATTGTCCTTCGCCTTCCAAGTTTTGAGTTCCATTGGCAGCCAGTCCGTTTTCCCTGTGTaGGTACTAGCACCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: SQITLSFAFQVLSSIGSQSVFPV*VLAPSS
Trigger: GGAAGAGGGTGCTAGTACCAACACAGGGAAAACGGA...CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp GCCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGGGAGGACTTCCACCTTaGCCTACAGAAGGACCCCAT +
Preference number: 3 (lower is better)
Translates to: ARWHNEFTEKQCSWAKNVGGLPP*PTEGPH
Trigger: ATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCC...CACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR GCA 72 bp GCAGCCAGATGGCATAATGAATTCACAGAAAAGCAATaGTCCTGGGCCAAGAATGTGTTGGCTCTTGGCCAG +
Preference number: 3 (lower is better)
Translates to: AARWHNEFTEKQ*SWAKNVLALGQ
Trigger: CTGGCCAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR CCA 72 bp GTGTTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTaGATCAGCCCCTTTCCACATCTGCATGCAGTTAGG +
Preference number: 3 (lower is better)
Translates to: VLKSLPVQEDPI*ISPFPHLHAVR
Trigger: CCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR CCA 72 bp AGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTaGGCCAAGAATGTGTTGGCTCTTGGCCAGCACCCC +
Preference number: 3 (lower is better)
Translates to: RWHNEFTEKQCS*AKNVLALGQHP
Trigger: GGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR CCA 72 bp TCAGTTCTGAGGCTGGTCTGGGGGTTAATGATTACTTaGGGGTTAAGGATCACTTCATCAAGTCCTCAGGGG +
Preference number: 3 (lower is better)
Translates to: SVLRLVWGLMIT*GLRITSSSPQG
Trigger: CCCCTGAGGACTTGATGAAGTGATCCTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTCAGAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp ATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGGACAGCAGTGGTGGTTaGGGCAGCCTTGGGGATGAT +
Preference number: 3 (lower is better)
Translates to: IMNSQKSNAPGPRMCWLLDSSGG*GSLGDD
Trigger: ATCATCCCCAAGGCTGCCCAAACCACCACTGCTGTC...CAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp GCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAGCGGATCCCTGGAGGACTGAATTCCCAAAAGTTTaGTGCAGAATAACTGGTATC +
Preference number: 3 (lower is better)
Translates to: APFHICMQLGDVADPWRTEFPKV*CRITGI
Trigger: GATACCAGTTATTCTGCACAAAACTTTTGGGAATTC...AGTCCTCCAGGGATCCGCTACATCCCCTAACTGCATGCAGATGTGGAAAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp GAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGGATCACTTCATCAAGGAGAGTGAGTTGTCATaGGCTAAGGCTCTTGTCCTC +
Preference number: 3 (lower is better)
Translates to: EAGLGVNDYLGVKDHFIKESELS*AKALVL
Trigger: GAGGACAAGAGCCTTAGCCAATGACAACTCACTCTC...CTTGATGAAGTGATCCTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp GAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAATTTGGCACTTCGGGTGCTGGGGTTAATGATTACTaGGGGGTTAAGGATCACTTC +
Preference number: 3 (lower is better)
Translates to: ELSLAKALVLLEFGTSGAGVNDY*GVKDHF
Trigger: GAAGTGATCCTTAACCCCCAAGTAATCATTAACCCC...AGCACCCGAAGTGCCAAATTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR CCA 72 bp CTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTaGGGGTTAATGATTACTTGGGGGTTAAGGATCACT +
Preference number: 3 (lower is better)
Translates to: LGQQSPSVLRLV*GLMITWGLRIT
Trigger: AGTGATCCTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR CCA 72 bp TACTTGTCCTTCTGTTTTTGGCTCACTCGTAAAAGCTaGAAGTCAAGGTGTCCTTCAGCTGCCAAGGACAGG +
Preference number: 3 (lower is better)
Translates to: YLSFCFWLTRKS*KSRCPSAAKDR
Trigger: CCTGTCCTTGGCAGCTGAAGGACACCTTGACTTCCAGCTTTTACGAGTGAGCCAAAAACAGAAGGACAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR CCA 72 bp AGCAGGCCAGCACAGTTGTACTTGTCCTTCTGTTTTTaGCTCACTCGTAAAAGCTGGAAGTCAAGGTGTCCT +
Preference number: 3 (lower is better)
Translates to: SRPAQLYLSFCF*LTRKSWKSRCP
Trigger: AGGACACCTTGACTTCCAGCTTTTACGAGTGAGCCAAAAACAGAAGGACAAGTACAACTGTGCTGGCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR-3UTR CAA 90 bp TCAGGGGATCTAGATACTTGGTTCAAAGGGGACTCTGACTTGGAAATTCCTGAGTTCGCCTTCCAAGTTTaGAGTTCCATTGGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: SGDLDTWFKGDSDLEIPEFAFQV*SSIGSQ
Trigger: CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAA...CTCAGGAATTTCCAAGTCAGAGTCCCCTTTGAACCAAGTATCTAGATCCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp TCAGGGGATCTAGATACTTGGTTCAAAGGGGACTCTGACTTGGAAATTCCTGAGCATTGGCTAAGGCTCTaGTCCTCCTGGAATTTGGCA +
Preference number: 3 (lower is better)
Translates to: SGDLDTWFKGDSDLEIPEHWLRL*SSWNLA
Trigger: TGCCAAATTCCAGGAGGACAAGAGCCTTAGCCAATG...CTCAGGAATTTCCAAGTCAGAGTCCCCTTTGAACCAAGTATCTAGATCCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR TCA 72 bp GTCTCTGGGCCACAGGCTGATAAGGAAGAGTTAACATaGTTGGCTCTTTGCCAGGTAAAGAAGGATAAGGCA +
Preference number: 3 (lower is better)
Translates to: VSGPQADKEELT*LALCQVKKDKA
Trigger: TGCCTTATCCTTCTTTACCTGGCAAAGAGCCAATCATGTTAACTCTTCCTTATCAGCCTGTGGCCCAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR GCA 72 bp ATTCCAGCAGAGATGTTTTCTTCAATGTCTTCCCTCTaGCTCATGTGTTTCCAATCTTACCTCCACAGCGGG +
Preference number: 3 (lower is better)
Translates to: IPAEMFSSMSSL*LMCFQSYLHSG
Trigger: CCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAGAGGGAAGACATTGAAGAAAACATCTCTGCTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp AAAAGCATTGAAATTCTGGATTATTTCACTACTTTGCCTCCATCTTTCCTGCTTTACCCATCCCCCTCTTaGGGGTTTCTAGCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: KSIEILDYFTTLPPSFLLYPSPS*GFLASL
Trigger: GAGGCTGGCTAGAAACCCCAAAGAGGGGGATGGGTA...AAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAATCCAGAATTTCAATGCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR GCA 72 bp AGTTTTGTGCAGAATAACTGGTATCTATTACTAGGATaGCAGATGATTCTGCCAGCTACCCATCCCCCTCTT +
Preference number: 3 (lower is better)
Translates to: SFVQNNWYLLLG*QMILPATHPPL
Trigger: AAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATACCAGTTATTCTGCACAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp TTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACATGAATTCCCAAAAGTTTaGTGCAGAATAACTGGTATC +
Preference number: 3 (lower is better)
Translates to: LKSLPVQEDPIWISPFPHEFPKV*CRITGI
Trigger: GATACCAGTTATTCTGCACAAAACTTTTGGGAATTC...ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR CCA 72 bp AAACTTAACCCCTATTTTCATCTTCATAGGAGAAGATaGCCTGAGGTCCTAAGGGTGTTAAAGAGTCTTCCT +
Preference number: 3 (lower is better)
Translates to: KLNPYFHLHRRR*PEVLRVLKSLP
Trigger: AGGAAGACTCTTTAACACCCTTAGGACCTCAGGCCATCTTCTCCTATGAAGATGAAAATAGGGGTTAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR-3UTR CAA 90 bp AAAAGCATTGAAATTCTGGATTATTTCACTACTTTGCCTCCATCTTTCCTGCTTGAATTCCCAAAAGTTTaGTGCAGAATAACTGGTATC +
Preference number: 3 (lower is better)
Translates to: KSIEILDYFTTLPPSFLLEFPKV*CRITGI
Trigger: GATACCAGTTATTCTGCACAAAACTTTTGGGAATTC...AAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAATCCAGAATTTCAATGCTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TGTCCCCGGGGAGGTAGCTCTGGTGGTCTCGACGGTCCTGGCCACTGTCCAGGCCCGGCTGGGCAGGGCTaGAGGTGTGTCTGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: CPRGGSSGGLDGPGHCPGPAGQG*RCVWGA
Trigger: CGCTCCCCAGACACACCTGCAGCCCTGCCCAGCCGG...GCCTGGACAGTGGCCAGGACCGTCGAGACCACCAGAGCTACCTCCCCGGGGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CCGACACCCCCTGTGACCCCAGGCTCATCCTTTATGGAAGTCCCAAGTGCCAGGCCGGCTGGGCAGGGCTaGAGGTGTGTCTGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: PTPPVTPGSSFMEVPSARPAGQG*RCVWGA
Trigger: CGCTCCCCAGACACACCTGCAGCCCTGCCCAGCCGG...CCTGGCACTTGGGACTTCCATAAAGGATGAGCCTGGGGTCACAGGGGGTGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CCA 90 bp AGAGGCTCTCTCTGGAGATGCGGGGAGGGAAGGAAGGGAGGAGAGAGGGGGAGATGGCCAGCATGTCACTaGGCTCGCCGGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RGSLWRCGEGRKGGERGRWPACH*ARRGPQ
Trigger: CTGAGGCCCCCGGCGAGCCCAGTGACATGCTGGCCA...TCTCCCCCTCTCTCCTCCCTTCCTTCCCTCCCCGCATCTCCAGAGAGAGCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CCA 90 bp TGTCCCCGGGGAGGTAGCTCTGGTGGTCTCGACGGTCCTGGCCACTGTCCAGGCTCAAGGGGGACTGTCTaGGCCCAGGTCCCATCCGTT +
Preference number: 4 (lower is better)
Translates to: CPRGGSSGGLDGPGHCPGSRGTV*AQVPSV
Trigger: AACGGATGGGACCTGGGCCCAGACAGTCCCCCTTGA...GCCTGGACAGTGGCCAGGACCGTCGAGACCACCAGAGCTACCTCCCCGGGGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp CCCTCTTTGGGGTTTCTAGCCAGCCTCCAGGGGAAGGGAGCAGCCTCTGAGGGCGCCCGACACCCCCTGTaGCCCCAGGCTCATCCTTTA +
Preference number: 4 (lower is better)
Translates to: PSLGFLASLQGKGAASEGARHPL*PQAHPL
Trigger: TAAAGGATGAGCCTGGGGTCACAGGGGGTGTCGGGC...GCCCTCAGAGGCTGCTCCCTTCCCCTGGAGGCTGGCTAGAAACCCCAAAGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR GCA 90 bp TGTCCCCGGGGAGGTAGCTCTGGTGGTCTCGACGGTCCTGGCCACTGTCCAGGCGACTCTGGGGCCAGCTaGAGACAGATGTTACCCACC +
Preference number: 4 (lower is better)
Translates to: CPRGGSSGGLDGPGHCPGDSGAS*RQMLPT
Trigger: GGTGGGTAACATCTGTCTGCAGCTGGCCCCAGAGTC...GCCTGGACAGTGGCCAGGACCGTCGAGACCACCAGAGCTACCTCCCCGGGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TGTCCCCGGGGAGGTAGCTCTGGTGGTCTCGACGGTCCTGGCCACTGTCCAGGCGAGACACACACAGGCTaGCCACCTGGGATTTTCCTC +
Preference number: 4 (lower is better)
Translates to: CPRGGSSGGLDGPGHCPGETHTG*PPGIFL
Trigger: GAGGAAAATCCCAGGTGGCCAGCCTGTGTGTGTCTC...GCCTGGACAGTGGCCAGGACCGTCGAGACCACCAGAGCTACCTCCCCGGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CCCTCTTTGGGGTTTCTAGCCAGCCTCCAGGGGAAGGGAGCAGCCTCTGAGGGCCCGTTAGCCGGGGTCTaGTTGTTGTTGGGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: PSLGFLASLQGKGAASEGPLAGV*LLLGSV
Trigger: CACCGACCCCAACAACAACCAGACCCCGGCTAACGG...GCCCTCAGAGGCTGCTCCCTTCCCCTGGAGGCTGGCTAGAAACCCCAAAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CCCTCTTTGGGGTTTCTAGCCAGCCTCCAGGGGAAGGGAGCAGCCTCTGAGGGCTGGTCTCGACGGTCCTaGCCACTGTCCAGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: PSLGFLASLQGKGAASEGWSRRS*PLSRLE
Trigger: CTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA...GCCCTCAGAGGCTGCTCCCTTCCCCTGGAGGCTGGCTAGAAACCCCAAAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCAACTCCAGGGATGGATCCCCCGCTaGGTCCACCGAGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GLCNPQTCGRSLPEPQLQGWIPR*VHRAGQ
Trigger: CTGACCTGCTCGGTGGACTCAGCGGGGGATCCATCC...CTGGAGTTGAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp TGGTCTCGACGGTCCTGGCCACTGTCCAGGCTAGAGTCTGATGTGCTTGCTGACCCCACCTCCTGGGCCTaGGCTGGACTTGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: WSRRSWPLSRLESDVLADPTSWA*AGLGRR
Trigger: CCTCCTTCCAAGTCCAGCTCAGGCCCAGGAGGTGGG...GTCAGCAAGCACATCAGACTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AGAGGCTCTCTCTGGAGATGCGGGGAGGGAAGGAAGGGAGGAGAGAGGGGGAGAGAAGGTGACGAAGGGTaGGACGCTGGCCAGCATGTC +
Preference number: 4 (lower is better)
Translates to: RGSLWRCGEGRKGGERGREGDEG*DAGQHV
Trigger: GACATGCTGGCCAGCGTCCCACCCTTCGTCACCTTC...TCTCCCCCTCTCTCCTCCCTTCCTTCCCTCCCCGCATCTCCAGAGAGAGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CCA 90 bp TGTCCCCGGGGAGGTAGCTCTGGTGGTCTCGACGGTCCTGGCCACTGTCCAGGCTCCCCTCTGAGTCTCTaGGTGCAAAGAGGAATTCCC +
Preference number: 4 (lower is better)
Translates to: CPRGGSSGGLDGPGHCPGSPLSL*VQRGIP
Trigger: GGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGA...GCCTGGACAGTGGCCAGGACCGTCGAGACCACCAGAGCTACCTCCCCGGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp CCCTCTTTGGGGTTTCTAGCCAGCCTCCAGGGGAAGGGAGCAGCCTCTGAGGGCGCATGTAGCGAGCATTaGGCTCCTTCACCAGCACCA +
Preference number: 4 (lower is better)
Translates to: PSLGFLASLQGKGAASEGACSEH*APSPAP
Trigger: TGGTGCTGGTGAAGGAGCTCAATGCTCGCTACATGC...GCCCTCAGAGGCTGCTCCCTTCCCCTGGAGGCTGGCTAGAAACCCCAAAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CCGACACCCCCTGTGACCCCAGGCTCATCCTTTATGGAAGTCCCAAGTGCCAGGACCGAAATCAGGATCTaGAGGCCGGCGGCCGTCATG +
Preference number: 4 (lower is better)
Translates to: PTPPVTPGSSFMEVPSARTEIRI*RPAAVM
Trigger: CATGACGGCCGCCGGCCTGCAGATCCTGATTTCGGT...CCTGGCACTTGGGACTTCCATAAAGGATGAGCCTGGGGTCACAGGGGGTGTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR GCA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCGAAGGCGACACCCACTaGCACACCATAGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: STAGSATLRHVADLSLSLEGDTH*HTIGQA
Trigger: AGCCTGCCCTATGGTGTGGCAGTGGGTGTCGCCTTC...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TGTCCCCGGGGAGGTAGCTCTGGTGGTCTCGACGGTCCTGGCCACTGTCCAGGCCATGACCTGGGCCAGTaGATAGCCATTTCGAAACTG +
Preference number: 4 (lower is better)
Translates to: CPRGGSSGGLDGPGHCPGHDLGQ*IAISKL
Trigger: CAGTTTCGAAATGGCTATGCACTGGCCCAGGTCATG...GCCTGGACAGTGGCCAGGACCGTCGAGACCACCAGAGCTACCTCCCCGGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp AGAGGCTCTCTCTGGAGATGCGGGGAGGGAAGGAAGGGAGGAGAGAGGGGGAGAGGCGGTCAGGGTCTCTaGGTGAAACATGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: RGSLWRCGEGRKGGERGRGGQGL*VKHAPE
Trigger: TTCGGGAGCATGTTTCACGCAGAGACCCTGACCGCC...TCTCCCCCTCTCTCCTCCCTTCCTTCCCTCCCCGCATCTCCAGAGAGAGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CCA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCGCTGGTGGCTCACTCTaGGCAGGTGAGGAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: STAGSATLRHVADLSLSLAGGSL*AGEELS
Trigger: TGACAGCTCCTCACCTGCCCAGAGTGAGCCACCAGC...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CCCTCTTTGGGGTTTCTAGCCAGCCTCCAGGGGAAGGGAGCAGCCTCTGAGGGCCTGACGGGTGAAGAGTaGGCTCACCAGACTCTCACT +
Preference number: 4 (lower is better)
Translates to: PSLGFLASLQGKGAASEGLTGEE*AHQTLT
Trigger: AGTGAGAGTCTGGTGAGCCCACTCTTCACCCGTCAG...GCCCTCAGAGGCTGCTCCCTTCCCCTGGAGGCTGGCTAGAAACCCCAAAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TGGTCTCGACGGTCCTGGCCACTGTCCAGGCTAGAGTCTGATGTGCTTGCTGACGTGAGCAAAGCCGGCTaGGCAGGGCTGCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: WSRRSWPLSRLESDVLADVSKAG*AGLQVC
Trigger: ACACACCTGCAGCCCTGCCCAGCCGGCTTTGCTCAC...GTCAGCAAGCACATCAGACTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCCTGGGGTCAAGGGGCCACGTAGCGGGGCCTaGGCTGGCTCATATCTGGGG +
Preference number: 4 (lower is better)
Translates to: KADLPKGGISLMGPGVKGPRSGA*AGSYLG
Trigger: CCCCAGATATGAGCCAGCCCAGGCCCCGCTACGTGG...CCCCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCGGATGGATCCCCCGCTaGGTCCACCGAGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: FGTSGAGHGESQITLSFAGWIPR*VHRAGQ
Trigger: CTGACCTGCTCGGTGGACTCAGCGGGGGATCCATCC...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCATGTCCGTGACAGCCTaGCACCATCTGACACCGAGC +
Preference number: 4 (lower is better)
Translates to: STAGSATLRHVADLSLSLMSVTA*HHLTPS
Trigger: GCTCGGTGTCAGATGGTGTCAGGCTGTCACGGACAT...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp CAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGCCCACCTCCTGGGCCTaGGCTGGACTTGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: QLQVTGSTISFSSEAGLGPTSWA*AGLGRR
Trigger: CCTCCTTCCAAGTCCAGCTCAGGCCCAGGAGGTGGG...CCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TGGTCTCGACGGTCCTGGCCACTGTCCAGGCTAGAGTCTGATGTGCTTGCTGACGAAGGCGACACCCACTaGCACACCATAGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: WSRRSWPLSRLESDVLADEGDTH*HTIGQA
Trigger: AGCCTGCCCTATGGTGTGGCAGTGGGTGTCGCCTTC...GTCAGCAAGCACATCAGACTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCGCCTCTCAGCCTCCATaGCTGCTGTGTCCACATAGC +
Preference number: 4 (lower is better)
Translates to: STAGSATLRHVADLSLSLASQPP*LLCPHS
Trigger: GCTATGTGGACACAGCAGCCATGGAGGCTGAGAGGC...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GGTGGAGTAGGGGAGAGTGAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAAGGCCTCAGCGGAGGCTaGTGGCTCACTCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GGVGESELSLAKALVLLEGLSGG*WLTLGR
Trigger: CCTGCCCAGAGTGAGCCACCAGCCTCCGCTGAGGCC...TTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTCACTCTCCCCTACTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCAACTCCAGGGTGTGGAGAGCACATaGTCCCTGGGTGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GLCNPQTCGRSLPEPQLQGVEST*SLGAEL
Trigger: CAGCTCTGCACCCAGGGACCATGTGCTCTCCACACC...CTGGAGTTGAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TGGTCTCGACGGTCCTGGCCACTGTCCAGGCTAGAGTCTGATGTGCTTGCTGACGGTGTGGAGAGCACATaGTCCCTGGGTGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: WSRRSWPLSRLESDVLADGVEST*SLGAEL
Trigger: CAGCTCTGCACCCAGGGACCATGTGCTCTCCACACC...GTCAGCAAGCACATCAGACTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp CCGACACCCCCTGTGACCCCAGGCTCATCCTTTATGGAAGTCCCAAGTGCCAGGGCGAATGTCCTCCTCTaGGTCGTACAAGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: PTPPVTPGSSFMEVPSARANVLL*VVQGEL
Trigger: GAGCTCTCCTTGTACGACTCAGAGGAGGACATTCGC...CCTGGCACTTGGGACTTCCATAAAGGATGAGCCTGGGGTCACAGGGGGTGTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR TCA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCCAGCCTGACACCATCTaGCACCGAGCCGTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: FGTSGAGHGESQITLSFAQPDTI*HRAVWA
Trigger: AGCCCACACGGCTCGGTGTCAGATGGTGTCAGGCTG...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCGGGTGCTGGGCACGGTaGATCCCAGATAACATTGTC +
Preference number: 4 (lower is better)
Translates to: STAGSATLRHVADLSLSLGCWAR*IPDNIV
Trigger: GACAATGTTATCTGGGATTCACCGTGCCCAGCACCC...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCAACTCCAGGGCCAGCAGAGCAAATaGCATGCCTTGTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: GLCNPQTCGRSLPEPQLQGQQSK*HALWDL
Trigger: CAGGTCCCACAAGGCATGGCATTTGCTCTGCTGGCC...CTGGAGTTGAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TGGTCTCGACGGTCCTGGCCACTGTCCAGGCTAGAGTCTGATGTGCTTGCTGACGACTCTGGGGCCAGCTaGAGACAGATGTTACCCACC +
Preference number: 4 (lower is better)
Translates to: WSRRSWPLSRLESDVLADDSGAS*RQMLPT
Trigger: GGTGGGTAACATCTGTCTGCAGCTGGCCCCAGAGTC...GTCAGCAAGCACATCAGACTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCAACTCCAGGCCTCTCAGCCTCCATaGCTGCTGTGTCCACATAGC +
Preference number: 4 (lower is better)
Translates to: GLCNPQTCGRSLPEPQLQASQPP*LLCPHS
Trigger: GCTATGTGGACACAGCAGCCATGGAGGCTGAGAGGC...CTGGAGTTGAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGGGTTTCTAGCCCAGGCGACACCGGGGTaGGGAACCCGCGTTGGATTT +
Preference number: 4 (lower is better)
Translates to: RMPDDSASYPSPSLGFLAQATPG*GTRVGF
Trigger: AAATCCAACGCGGGTTCCCCACCCCGGTGTCGCCTG...GGCTAGAAACCCCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACCAGGCGACACCGGGGTaGGGAACCCGCGTTGGATTT +
Preference number: 4 (lower is better)
Translates to: LPHVFPILPPQRALQPSDQATPG*GTRVGF
Trigger: AAATCCAACGCGGGTTCCCCACCCCGGTGTCGCCTG...GTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCCTGGGGTCAAGGGGGAAGGTGACGAAGGGTaGGACGCTGGCCAGCATGTC +
Preference number: 4 (lower is better)
Translates to: KADLPKGGISLMGPGVKGEGDEG*DAGQHV
Trigger: GACATGCTGGCCAGCGTCCCACCCTTCGTCACCTTC...CCCCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AGAGGCTCTCTCTGGAGATGCGGGGAGGGAAGGAAGGGAGGAGAGAGGGGGAGATCCCCTCTGAGTCTCTaGGTGCAAAGAGGAATTCCC +
Preference number: 4 (lower is better)
Translates to: RGSLWRCGEGRKGGERGRSPLSL*VQRGIP
Trigger: GGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGA...TCTCCCCCTCTCTCCTCCCTTCCTTCCCTCCCCGCATCTCCAGAGAGAGCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CCA 90 bp GGATGTAGCGGATCCCTGGAGGACTTCCACCTTTGCCTACAGAAGGACCCCATTAGGCAGCATGAGGACTaGCTGAGCCCTCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: GCSGSLEDFHLCLQKDPIRQHED*LSPHRA
Trigger: CGCCCTGTGAGGGCTCAGCCAGTCCTCATGCTGCCT...AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR TCA 90 bp AGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGGCCAGCACCCCCTCATGTCCTTCCACTGTaGGACCACAGGCGACACCGG +
Preference number: 4 (lower is better)
Translates to: RKAMLLGQECVGSWPAPPHVLPL*DHRRHR
Trigger: CCGGTGTCGCCTGTGGTCTCACAGTGGAAGGACATG...AGGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GAAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTATTGCGGCCAGGGCCTaGCGGGTGAAGAGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: EDPIWISPFPHLHAVRGCIAARA*RVKSGL
Trigger: GAGCCCACTCTTCACCCGTCAGGCCCTGGCCGCAAT...ACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGATTGCGGCCAGGGCCTaGCGGGTGAAGAGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: RSLGQQSPSVLRLVWGLMIAARA*RVKSGL
Trigger: GAGCCCACTCTTCACCCGTCAGGCCCTGGCCGCAAT...CATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp CTCTCCCTGAGCCTCAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGGAGGCATTTCCCTaGTGGGCCCTGGGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: LSLSLNSRSLGQQSPSVLREAFP*WALGSR
Trigger: CCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCT...CAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTGAGGCTCAGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GGTGGAGTAGGGGAGAGTGAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAAAGGGAGGCATTTCCCTaGTGGGCCCTGGGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: GGVGESELSLAKALVLLEREAFP*WALGSR
Trigger: CCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCT...TTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTCACTCTCCCCTACTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TTCCCTGTGTTGGTACTAGCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAAGGAGGCTTGTCCATTaGGGCCAGGGCCTGACGGGT +
Preference number: 4 (lower is better)
Translates to: FPVLVLAPSSPLSLWVQRRRLVH*GQGLTG
Trigger: ACCCGTCAGGCCCTGGCCGCAATGGACAAGCCTCCT...TCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGCTAGTACCAACACAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCGGCTCTCTCTGGAGATaGGGGGAGGGAAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: FGTSGAGHGESQITLSFAGSLWR*GEGRKG
Trigger: TCCCTTCCTTCCCTCCCCGCATCTCCAGAGAGAGCC...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CCA 90 bp AGAGGCTCTCTCTGGAGATGCGGGGAGGGAAGGAAGGGAGGAGAGAGGGGGAGAGAGGCGATGTTGGTGTaGGGGAGGTTTTTGCAAATG +
Preference number: 4 (lower is better)
Translates to: RGSLWRCGEGRKGGERGREAMLV*GRFLQM
Trigger: CATTTGCAAAAACCTCCCCCACACCAACATCGCCTC...TCTCCCCCTCTCTCCTCCCTTCCTTCCCTCCCCGCATCTCCAGAGAGAGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CCA 90 bp CGAGCCGTGTGGGCTCTGGGACACTTTTTGAAGCTTGTACAGCAGGCCAGCACAGTGGGGAACCCGCGTTaGATTTCTCCCACGATCTGC +
Preference number: 4 (lower is better)
Translates to: RAVWALGHFLKLVQQASTVGNPR*ISPTIC
Trigger: GCAGATCGTGGGAGAAATCCAACGCGGGTTCCCCAC...TGTGCTGGCCTGCTGTACAAGCTTCAAAAAGTGTCCCAGAGCCCACACGGCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CCA 90 bp AATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCGCTGGTGGCTCACTCTaGGCAGGTGAGGAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: NLTSTAGSATLRHVADLSAGGSL*AGEELS
Trigger: TGACAGCTCCTCACCTGCCCAGAGTGAGCCACCAGC...GGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CATAGGAGAAGATGGCCTGAGGTCCTAAGGGTGTTAAAGAGTCTTCCTGTGCAGTGGCCAGCATGTCACTaGGCTCGCCGGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: HRRRWPEVLRVLKSLPVQWPACH*ARRGPQ
Trigger: CTGAGGCCCCCGGCGAGCCCAGTGACATGCTGGCCA...CTGCACAGGAAGACTCTTTAACACCCTTAGGACCTCAGGCCATCTTCTCCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TGGTCTCGACGGTCCTGGCCACTGTCCAGGCTAGAGTCTGATGTGCTTGCTGACCAAGGCCTAGACTCCTaGGTGTGGAGAGCACATGGT +
Preference number: 4 (lower is better)
Translates to: WSRRSWPLSRLESDVLADQGLDS*VWRAHG
Trigger: ACCATGTGCTCTCCACACCCAGGAGTCTAGGCCTTG...GTCAGCAAGCACATCAGACTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CAGGGCCTGACGGGTGAAGAGTGGGCTCACCAGACTCTCACTCCTGTAAGGGTAACAGCAGTGGTGGTTTaGGCAGCCTTGGGGATGATG +
Preference number: 4 (lower is better)
Translates to: QGLTGEEWAHQTLTPVRVTAVVV*AALGMM
Trigger: CATCATCCCCAAGGCTGCCCAAACCACCACTGCTGT...TACCCTTACAGGAGTGAGAGTCTGGTGAGCCCACTCTTCACCCGTCAGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CCA 90 bp TGGTCTCGACGGTCCTGGCCACTGTCCAGGCTAGAGTCTGATGTGCTTGCTGACGATGTAGCGGATCCCTaGAGGACTTCCACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: WSRRSWPLSRLESDVLADDVADP*RTSTFA
Trigger: GGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATC...GTCAGCAAGCACATCAGACTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCGAATGTGTTGGCTCTTaGCCAGCACCCCCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: STAGSATLRHVADLSLSLECVGS*PAPPPL
Trigger: TAAAGGAGGGGGTGCTGGCCAAGAGCCAACACATTC...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCGGGCCAAGAATGTGTTaGCTCTTGGCCAGCACCCCC +
Preference number: 4 (lower is better)
Translates to: NLTSTAGSATLRHVADLSGPRMC*LLASTP
Trigger: GGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCC...GGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CCCTCTTTGGGGTTTCTAGCCAGCCTCCAGGGGAAGGGAGCAGCCTCTGAGGGCGAAAAGCAATGCTCCTaGGCCAAGAATGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: PSLGFLASLQGKGAASEGEKQCS*AKNVLA
Trigger: AGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTC...GCCCTCAGAGGCTGCTCCCTTCCCCTGGAGGCTGGCTAGAAACCCCAAAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GGTGGAGTAGGGGAGAGTGAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAAGTGAGCAAAGCCGGCTaGGCAGGGCTGCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: GGVGESELSLAKALVLLEVSKAG*AGLQVC
Trigger: ACACACCTGCAGCCCTGCCCAGCCGGCTTTGCTCAC...TTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTCACTCTCCCCTACTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367134.2
ENST00000367135.8
3UTR CAA 72 bp ACTGTCTGGGCCCAGGTCCCATCCGTTTTCCCTGTGTaGGTACTAGCACCCTCTTCCCCTCTGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TVWAQVPSVFPV*VLAPSSPLSLW
Trigger: CCAGAGACTCAGAGGGGAAGAGGGTGCTAGTACCAACACAGGGAAAACGGATGGGACCTGGGCCCAGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCCTGGGGTCAAGGGGCCAGGACCAGCATGGTaGTCATCACCACCAGAGACA +
Preference number: 4 (lower is better)
Translates to: KADLPKGGISLMGPGVKGPGPAW*SSPPET
Trigger: TGTCTCTGGTGGTGATGATCACCATGCTGGTCCTGG...CCCCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAAAGTTTTATTGCGGCCAGGGCCTaGCGGGTGAAGAGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: APSSPLSLWVQRGIPKSFIAARA*RVKSGL
Trigger: GAGCCCACTCTTCACCCGTCAGGCCCTGGCCGCAAT...AAAACTTTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GAAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTCAGCCTGACACCATCTaGCACCGAGCCGTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: EDPIWISPFPHLHAVRGCQPDTI*HRAVWA
Trigger: AGCCCACACGGCTCGGTGTCAGATGGTGTCAGGCTG...ACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GGATGTAGCGGATCCCTGGAGGACTTCCACCTTTGCCTACAGAAGGACCCCATTATGTCCGTGACAGCCTaGCACCATCTGACACCGAGC +
Preference number: 4 (lower is better)
Translates to: GCSGSLEDFHLCLQKDPIMSVTA*HHLTPS
Trigger: GCTCGGTGTCAGATGGTGTCAGGCTGTCACGGACAT...AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GGATGTAGCGGATCCCTGGAGGACTTCCACCTTTGCCTACAGAAGGACCCCATTCACCCTCTTCCCCTCTaGGTCTCTGGGTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: GCSGSLEDFHLCLQKDPIHPLPL*VSGCKE
Trigger: CTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTG...AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TGGTCTCGACGGTCCTGGCCACTGTCCAGGCTAGAGTCTGATGTGCTTGCTGACGAGGGTAAGGGAGTATaGGGCTCTGTCTACCACGTA +
Preference number: 4 (lower is better)
Translates to: WSRRSWPLSRLESDVLADEGKGV*GSVYHV
Trigger: TACGTGGTAGACAGAGCCGCATACTCCCTTACCCTC...GTCAGCAAGCACATCAGACTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAGCGTAGCTGACACGTaGAGCCTCTCAGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: LQVTGSTISFSSEAGLGVSVADT*SLSASM
Trigger: CATGGAGGCTGAGAGGCTGCACGTGTCAGCTACGCT...AACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CAGGGCCTGACGGGTGAAGAGTGGGCTCACCAGACTCTCACTCCTGTAAGGGTACCCGGAGATAGCTGTTaGCACCACCACCACAATCAT +
Preference number: 4 (lower is better)
Translates to: QGLTGEEWAHQTLTPVRVPGDSC*HHHHNH
Trigger: ATGATTGTGGTGGTGGTGGCAACAGCTATCTCCGGG...TACCCTTACAGGAGTGAGAGTCTGGTGAGCCCACTCTTCACCCGTCAGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR GCA 90 bp CTCTCCCTGAGCCTCAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGGAAGGCGACACCCACTaGCACACCATAGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LSLSLNSRSLGQQSPSVLEGDTH*HTIGQA
Trigger: AGCCTGCCCTATGGTGTGGCAGTGGGTGTCGCCTTC...CAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTGAGGCTCAGGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GGATGTAGCGGATCCCTGGAGGACTTCCACCTTTGCCTACAGAAGGACCCCATTGGCGGTCAGGGTCTCTaGGTGAAACATGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: GCSGSLEDFHLCLQKDPIGGQGL*VKHAPE
Trigger: TTCGGGAGCATGTTTCACGCAGAGACCCTGACCGCC...AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCATGCCTTGTGGGACCTaGATGGATCCCCCGCTGAGT +
Preference number: 4 (lower is better)
Translates to: FGTSGAGHGESQITLSFAMPCGT*MDPPLS
Trigger: ACTCAGCGGGGGATCCATCCAGGTCCCACAAGGCAT...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCCTGGGGTCAAGGGGAAATGCCATGCCTTGTaGGACCTGGATGGATCCCCC +
Preference number: 4 (lower is better)
Translates to: KADLPKGGISLMGPGVKGKCHAL*DLDGSP
Trigger: GGGGGATCCATCCAGGTCCCACAAGGCATGGCATTT...CCCCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGGGTTTCTAGCCAAGCCCAGACCCATCTaGATGATGGCGGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RMPDDSASYPSPSLGFLAKPRPI*MMAVRQ
Trigger: CTGCCTCACCGCCATCATCCAGATGGGTCTGGGCTT...GGCTAGAAACCCCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCCACAGGCTGGCCACCTaGGATTTTCCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: FGTSGAGHGESQITLSFAHRLAT*DFPPAP
Trigger: TGGAGCTGGAGGAAAATCCCAGGTGGCCAGCCTGTG...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CTCTCCCTGAGCCTCAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGGCTGGTGGCTCACTCTaGGCAGGTGAGGAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LSLSLNSRSLGQQSPSVLAGGSL*AGEELS
Trigger: TGACAGCTCCTCACCTGCCCAGAGTGAGCCACCAGC...CAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTGAGGCTCAGGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GCAGGCCAGCACAGTTGTACTTGTCCTTCTGTTTTTGGCTCACTCGTAAAAGCTGGCCTCAGCGGAGGCTaGTGGCTCACTCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGQHSCTCPSVFGSLVKAGLSGG*WLTLGR
Trigger: CCTGCCCAGAGTGAGCCACCAGCCTCCGCTGAGGCC...AGCTTTTACGAGTGAGCCAAAAACAGAAGGACAAGTACAACTGTGCTGGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CCA 90 bp TCCCAGATAACATTGTCCTTCGCCTTCCAAGTTTTGAGTTCCATTGGCAGCCAGTGGCCAGCATGTCACTaGGCTCGCCGGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SQITLSFAFQVLSSIGSQWPACH*ARRGPQ
Trigger: CTGAGGCCCCCGGCGAGCCCAGTGACATGCTGGCCA...CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AATGTCTTCCCTCTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCGAAGGGTGGGACGCTaGCCAGCATGTCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: NVFPLPHVFPILPPQRALRRVGR*PACHWA
Trigger: AGCCCAGTGACATGCTGGCCAGCGTCCCACCCTTCG...CAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAGAGGGAAGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GAAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTCGAAGGGTGGGACGCTaGCCAGCATGTCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: EDPIWISPFPHLHAVRGCRRVGR*PACHWA
Trigger: AGCCCAGTGACATGCTGGCCAGCGTCCCACCCTTCG...ACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGAGAGCACATGGTCCCTaGGTGCAGAGCTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: QLQVTGSTISFSSEAGLGRAHGP*VQSCQR
Trigger: TCTCTGGCAGCTCTGCACCCAGGGACCATGTGCTCT...CCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GGATGTAGCGGATCCCTGGAGGACTTCCACCTTTGCCTACAGAAGGACCCCATTCTAGACTCCTGGGTGTaGAGAGCACATGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GCSGSLEDFHLCLQKDPILDSWV*RAHGPW
Trigger: CCAGGGACCATGTGCTCTCCACACCCAGGAGTCTAG...AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCCTAGACTCCTGGGTGTaGAGAGCACATGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: FGTSGAGHGESQITLSFALDSWV*RAHGPW
Trigger: CCAGGGACCATGTGCTCTCCACACCCAGGAGTCTAG...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAGCGGATCCCTGGAGGACTGATGTAGCGGATCCCTaGAGGACTTCCACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: APFHICMQLGDVADPWRTDVADP*RTSTFA
Trigger: GGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATC...AGTCCTCCAGGGATCCGCTACATCCCCTAACTGCATGCAGATGTGGAAAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCCACACAACGCAGGTCTaGCTGAAGTTAGAAATGGGG +
Preference number: 4 (lower is better)
Translates to: STAGSATLRHVADLSLSLHTTQV*LKLEMG
Trigger: CCCCATTTCTAACTTCAGCCAGACCTGCGTTGTGTG...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TTCCCTGTGTTGGTACTAGCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGGCCAAGAATGTGTTaGCTCTTGGCCAGCACCCCC +
Preference number: 4 (lower is better)
Translates to: FPVLVLAPSSPLSLWVQRGPRMC*LLASTP
Trigger: GGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCC...TCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGCTAGTACCAACACAGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTACCACGTAGCGGGGCCTaGGCTGGCTCATATCTGGGG +
Preference number: 4 (lower is better)
Translates to: KTQSGSAPFHICMQLGDVPRSGA*AGSYLG
Trigger: CCCCAGATATGAGCCAGCCCAGGCCCCGCTACGTGG...TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp CCGACACCCCCTGTGACCCCAGGCTCATCCTTTATGGAAGTCCCAAGTGCCAGGCAAACACCACAGCTTTaGTCTTGGCTGAGGAACATC +
Preference number: 4 (lower is better)
Translates to: PTPPVTPGSSFMEVPSARQTPQL*SWLRNI
Trigger: GATGTTCCTCAGCCAAGATCAAAGCTGTGGTGTTTG...CCTGGCACTTGGGACTTCCATAAAGGATGAGCCTGGGGTCACAGGGGGTGTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR TCA 90 bp AAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCCTGGGGTCAAGGGGCAAAGCCAAACTGCATaGAGCCCAGACCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: KADLPKGGISLMGPGVKGQSQTA*SPDPSG
Trigger: TCCAGATGGGTCTGGGCTTCATGCAGTTTGGCTTTG...CCCCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AATGTCTTCCCTCTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCATGTCCTTCCACTGTaGGACCACAGGCGACACCGG +
Preference number: 4 (lower is better)
Translates to: NVFPLPHVFPILPPQRALHVLPL*DHRRHR
Trigger: CCGGTGTCGCCTGTGGTCTCACAGTGGAAGGACATG...CAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAGAGGGAAGACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCGCGAATGTCCTCCTCTaGGTCGTACAAGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: NLTSTAGSATLRHVADLSANVLL*VVQGEL
Trigger: GAGCTCTCCTTGTACGACTCAGAGGAGGACATTCGC...GGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGGGTTTCTAGCCGCGAATGTCCTCCTCTaGGTCGTACAAGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RMPDDSASYPSPSLGFLAANVLL*VVQGEL
Trigger: GAGCTCTCCTTGTACGACTCAGAGGAGGACATTCGC...GGCTAGAAACCCCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTACAGCCTGACACCATCTaGCACCGAGCCGTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: KTQSGSAPFHICMQLGDVQPDTI*HRAVWA
Trigger: AGCCCACACGGCTCGGTGTCAGATGGTGTCAGGCTG...TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GGATGTAGCGGATCCCTGGAGGACTTCCACCTTTGCCTACAGAAGGACCCCATTGATGTTTCAGGAGGCTaGGGCAGAACCTTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: GCSGSLEDFHLCLQKDPIDVSGG*GRTLVG
Trigger: GCCCACTAAGGTTCTGCCTCAGCCTCCTGAAACATC...AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GTTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACAAGCATGAGGACTGGCTaGGCCCTCACAGGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: VKESSCAGRPNLDQPLSTSMRTG*ALTGRS
Trigger: TGACCGCCCTGTGAGGGCTCAGCCAGTCCTCATGCT...TGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR GCA 90 bp CTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTGTAGAGGCCATTGACTaGAGGAAGGTTGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LQVTGSTISFSSEAGLGVVEAID*RKVGQQ
Trigger: CTGCTGGCCAACCTTCCTGCAGTCAATGGCCTCTAC...AACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCAACTCCAGAGCCAAAGAAGTTGCTaGAGCCGAGAGCGATCATCT +
Preference number: 4 (lower is better)
Translates to: GLCNPQTCGRSLPEPQLQSQRSC*SRERSS
Trigger: AGATGATCGCTCTCGGCTGCAGCAACTTCTTTGGCT...CTGGAGTTGAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CCCTCTTTGGGGTTTCTAGCCAGCCTCCAGGGGAAGGGAGCAGCCTCTGAGGGCATTCTCCGCTTCTCCTaGTTCTTGAGGTATTTTTGC +
Preference number: 4 (lower is better)
Translates to: PSLGFLASLQGKGAASEGILRFS*FLRYFC
Trigger: GCAAAAATACCTCAAGAAGCAGGAGAAGCGGAGAAT...GCCCTCAGAGGCTGCTCCCTTCCCCTGGAGGCTGGCTAGAAACCCCAAAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAGCGGATCCCTGGAGGACTTTCTCAAAGTCCTGCTaGAGCTCCTGCAGGGAGACA +
Preference number: 4 (lower is better)
Translates to: APFHICMQLGDVADPWRTFSKSC*SSCRET
Trigger: TGTCTCCCTGCAGGAGCTGCAGCAGGACTTTGAGAA...AGTCCTCCAGGGATCCGCTACATCCCCTAACTGCATGCAGATGTGGAAAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCATGCTGGGAAAGACGTaGTTGCATTCTAGACTCCCA +
Preference number: 4 (lower is better)
Translates to: STAGSATLRHVADLSLSLMLGKT*LHSRLP
Trigger: TGGGAGTCTAGAATGCAAGCACGTCTTTCCCAGCAT...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAGCGGATCCCTGGAGGACTCACGTCTCTAGCATTTaGCTGGGCAAAGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: APFHICMQLGDVADPWRTHVSSI*LGKEDC
Trigger: GCAGTCCTCTTTGCCCAGGCAAATGCTAGAGACGTG...AGTCCTCCAGGGATCCGCTACATCCCCTAACTGCATGCAGATGTGGAAAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CATAGGAGAAGATGGCCTGAGGTCCTAAGGGTGTTAAAGAGTCTTCCTGTGCAGAGGAGGCTTGTCCATTaGGGCCAGGGCCTGACGGGT +
Preference number: 4 (lower is better)
Translates to: HRRRWPEVLRVLKSLPVQRRLVH*GQGLTG
Trigger: ACCCGTCAGGCCCTGGCCGCAATGGACAAGCCTCCT...CTGCACAGGAAGACTCTTTAACACCCTTAGGACCTCAGGCCATCTTCTCCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp AGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGGGTTTCTAGCCAAGGTGTCCTTCAGCTaGCAAGGACAGGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RMPDDSASYPSPSLGFLAKVSFS*QGQGRG
Trigger: ACCTCTGCCCTGTCCTTGGCAGCTGAAGGACACCTT...GGCTAGAAACCCCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GTACTAGCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAACTCCACAGCGGGCTCTaGAACCCTCAGACATGTGGC +
Preference number: 4 (lower is better)
Translates to: VLAPSSPLSLWVQRGIPKLHSGL*NPQTCG
Trigger: GCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAG...TTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGCTAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CCGAGCCGTGTGGGCTCTGGGACACTTTTTGAAGCTTGTACAGCAGGCCAGCACTGCCTCCATCTTTCCTaGTTCAACCAGGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PSRVGSGTLFEACTAGQHCLHLS*FNQVQK
Trigger: CTTCTGGACCTGGTTGAAGCAGGAAAGATGGAGGCA...GTGCTGGCCTGCTGTACAAGCTTCAAAAAGTGTCCCAGAGCCCACACGGCTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR GCA 90 bp AAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCCTGGGGTCAAGGGGTATGGAAGTCCCAAGTaGCAGGCACTCTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: KADLPKGGISLMGPGVKGYGSPK*QALCRQ
Trigger: CTGCCTACAGAGTGCCTGGCACTTGGGACTTCCATA...CCCCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CCA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCAAAGACGATGGACCCTaGGCCTGTGTAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: FGTSGAGHGESQITLSFAKDDGP*ACVGGD
Trigger: ATCCCCTCCTACACAGGCCCAGGGTCCATCGTCTTT...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCAACTCCAGGCATGTGATACTTTTTaGGCATCTTACAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: GLCNPQTCGRSLPEPQLQACDTF*ASYSPR
Trigger: CCGGGGGCTGTAAGATGCCCAAAAAGTATCACATGC...CTGGAGTTGAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCGCTAGTAATACTTTCTaGGGGTCCATGCCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: STAGSATLRHVADLSLSLASNTF*GSMPVL
Trigger: CAAGACAGGCATGGACCCCCAGAAAGTATTACTAGC...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TGGTCTCGACGGTCCTGGCCACTGTCCAGGCTAGAGTCTGATGTGCTTGCTGACTCTCTAGCATTTGCCTaGGCAAAGAGGACTGCGTCA +
Preference number: 4 (lower is better)
Translates to: WSRRSWPLSRLESDVLADSLAFA*AKRTAS
Trigger: TGACGCAGTCCTCTTTGCCCAGGCAAATGCTAGAGA...GTCAGCAAGCACATCAGACTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCTTGGAAGTTGTGTCCTaGGGTCACGTCTCTAGCATT +
Preference number: 4 (lower is better)
Translates to: STAGSATLRHVADLSLSLLEVVS*GHVSSI
Trigger: AATGCTAGAGACGTGACCCCAGGACACAACTTCCAA...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GTACTAGCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAATGGTCTCGACGGTCCTaGCCACTGTCCAGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: VLAPSSPLSLWVQRGIPKWSRRS*PLSRLE
Trigger: CTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA...TTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGCTAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TGGTCTCGACGGTCCTGGCCACTGTCCAGGCTAGAGTCTGATGTGCTTGCTGACCACACAACGCAGGTCTaGCTGAAGTTAGAAATGGGG +
Preference number: 4 (lower is better)
Translates to: WSRRSWPLSRLESDVLADHTTQV*LKLEMG
Trigger: CCCCATTTCTAACTTCAGCCAGACCTGCGTTGTGTG...GTCAGCAAGCACATCAGACTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GGATGTAGCGGATCCCTGGAGGACTTCCACCTTTGCCTACAGAAGGACCCCATTCAAAGCCAAACTGCATaGAGCCCAGACCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: GCSGSLEDFHLCLQKDPIQSQTA*SPDPSG
Trigger: TCCAGATGGGTCTGGGCTTCATGCAGTTTGGCTTTG...AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCAAATGTCAGTGTCCATaGCCTGGGCCAGTGCATAGC +
Preference number: 4 (lower is better)
Translates to: NLTSTAGSATLRHVADLSKCQCP*PGPVHS
Trigger: GCTATGCACTGGCCCAGGTCATGGACACTGACATTT...GGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCTCAAGTCCACGAAGCTaGCTCCACTCATGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: NLTSTAGSATLRHVADLSSSPRS*LHSCPG
Trigger: TCCTGGACATGAGTGGAGTCAGCTTCGTGGACTTGA...GGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GTACTAGCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAAAGCGTAGCTGACACGTaGAGCCTCTCAGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: VLAPSSPLSLWVQRGIPKSVADT*SLSASM
Trigger: CATGGAGGCTGAGAGGCTGCACGTGTCAGCTACGCT...TTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGCTAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCTTCTCAAAGTCCTGCTaGAGCTCCTGCAGGGAGACA +
Preference number: 4 (lower is better)
Translates to: FGTSGAGHGESQITLSFAFSKSC*SSCRET
Trigger: TGTCTCCCTGCAGGAGCTGCAGCAGGACTTTGAGAA...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CTCTCCCTGAGCCTCAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAAGGTGTCCTTCAGCTaGCAAGGACAGGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LSLSLNSRSLGQQSPSVLKVSFS*QGQGRG
Trigger: ACCTCTGCCCTGTCCTTGGCAGCTGAAGGACACCTT...CAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTGAGGCTCAGGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCTGGAATTTCGACTCTaGGGCCAGCTGCAGACAGAT +
Preference number: 4 (lower is better)
Translates to: QSYLHSGLCNPQTCGRSLLEFRL*GQLQTD
Trigger: ATCTGTCTGCAGCTGGCCCCAGAGTCGAAATTCCAG...GAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAGCGGATCCCTGGAGGACTCTGTGTAGGAGGGGATaGTCAGTCCGAAGATGTACT +
Preference number: 4 (lower is better)
Translates to: APFHICMQLGDVADPWRTLCRRG*SVRRCT
Trigger: AGTACATCTTCGGACTGACCATCCCCTCCTACACAG...AGTCCTCCAGGGATCCGCTACATCCCCTAACTGCATGCAGATGTGGAAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAAAAGACGATGGACCCTaGGCCTGTGTAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: CVSNLTSTAGSATLRHVAKDDGP*ACVGGD
Trigger: ATCCCCTCCTACACAGGCCCAGGGTCCATCGTCTTT...TGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGGTGGGGAACCCGCGTTaGATTTCTCCCACGATCTGC +
Preference number: 4 (lower is better)
Translates to: RSLGQQSPSVLRLVWGLMVGNPR*ISPTIC
Trigger: GCAGATCGTGGGAGAAATCCAACGCGGGTTCCCCAC...CATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGGCCAGCACCCCCTACCTCCTCTGTTGTGTaGGCCTCATTCTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: RKAMLLGQECVGSWPAPPTSSVV*ASFSAS
Trigger: AGAAGCGGAGAATGAGGCCCACACAACAGAGGAGGT...AGGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CATAGGAGAAGATGGCCTGAGGTCCTAAGGGTGTTAAAGAGTCTTCCTGTGCAGCCGTTAGCCGGGGTCTaGTTGTTGTTGGGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: HRRRWPEVLRVLKSLPVQPLAGV*LLLGSV
Trigger: CACCGACCCCAACAACAACCAGACCCCGGCTAACGG...CTGCACAGGAAGACTCTTTAACACCCTTAGGACCTCAGGCCATCTTCTCCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTACCGTTAGCCGGGGTCTaGTTGTTGTTGGGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: KTQSGSAPFHICMQLGDVPLAGV*LLLGSV
Trigger: CACCGACCCCAACAACAACCAGACCCCGGCTAACGG...TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCACTGACGGGTGAAGAGTaGGCTCACCAGACTCTCACT +
Preference number: 4 (lower is better)
Translates to: CVSNLTSTAGSATLRHVALTGEE*AHQTLT
Trigger: AGTGAGAGTCTGGTGAGCCCACTCTTCACCCGTCAG...TGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGAGAGCACATGGTCCCTaGGTGCAGAGCTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RSLGQQSPSVLRLVWGLMRAHGP*VQSCQR
Trigger: TCTCTGGCAGCTCTGCACCCAGGGACCATGTGCTCT...CATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CATAGGAGAAGATGGCCTGAGGTCCTAAGGGTGTTAAAGAGTCTTCCTGTGCAGTGGTCTCGACGGTCCTaGCCACTGTCCAGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: HRRRWPEVLRVLKSLPVQWSRRS*PLSRLE
Trigger: CTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA...CTGCACAGGAAGACTCTTTAACACCCTTAGGACCTCAGGCCATCTTCTCCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GGATGTAGCGGATCCCTGGAGGACTTCCACCTTTGCCTACAGAAGGACCCCATTTCCCCTCTGAGTCTCTaGGTGCAAAGAGGAATTCCC +
Preference number: 4 (lower is better)
Translates to: GCSGSLEDFHLCLQKDPISPLSL*VQRGIP
Trigger: GGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGA...AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CATAGGAGAAGATGGCCTGAGGTCCTAAGGGTGTTAAAGAGTCTTCCTGTGCAGTTCCCTGATGGGCCCTaGGGTCAAGGGGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: HRRRWPEVLRVLKSLPVQFPDGP*GQGGLS
Trigger: AGACAGTCCCCCTTGACCCCAGGGCCCATCAGGGAA...CTGCACAGGAAGACTCTTTAACACCCTTAGGACCTCAGGCCATCTTCTCCTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTATTCCCTGATGGGCCCTaGGGTCAAGGGGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: KTQSGSAPFHICMQLGDVFPDGP*GQGGLS
Trigger: AGACAGTCCCCCTTGACCCCAGGGCCCATCAGGGAA...TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACGAATGTGTTGGCTCTTaGCCAGCACCCCCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: LPHVFPILPPQRALQPSDECVGS*PAPPPL
Trigger: TAAAGGAGGGGGTGCTGGCCAAGAGCCAACACATTC...GTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGGCATTTACAAGCAGTaGGTGAGCAAAGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: CVSNLTSTAGSATLRHVAGIYKQ*VSKAGW
Trigger: CCAGCCGGCTTTGCTCACCCACTGCTTGTAAATGCC...TGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367134.2
ENST00000367135.8
3UTR CAA 72 bp AGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAATTaGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGA +
Preference number: 4 (lower is better)
Translates to: SCHWLRLLSSWN*ALRVLGTVNPR
Trigger: TCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAATTCCAGGAGGACAAGAGCCTTAGCCAATGACAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAATTTGGCACTTCGGGTGCTCCAGGACCAGCATGGTaGTCATCACCACCAGAGACA +
Preference number: 4 (lower is better)
Translates to: ELSLAKALVLLEFGTSGAPGPAW*SSPPET
Trigger: TGTCTCTGGTGGTGATGATCACCATGCTGGTCCTGG...AGCACCCGAAGTGCCAAATTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp CTGGTATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTCACCCTCTTCCCCTCTaGGTCTCTGGGTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LVSITRMPDDSASYPSPSHPLPL*VSGCKE
Trigger: CTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTG...AGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCAAGGAAGAGTTAACATaGTTGGCTCTTTGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: STAGSATLRHVADLSLSLKEELT*LALCQV
Trigger: TACCTGGCAAAGAGCCAATCATGTTAACTCTTCCTT...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGGGTTTCTAGCCTCGCCTTCCAAGTTTTaGGTTCCATTGGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RMPDDSASYPSPSLGFLASPSKF*VPLAAR
Trigger: TCTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGA...GGCTAGAAACCCCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACATACCGAAATCAGGATCTaGAGGCCGGCGGCCGTCATG +
Preference number: 4 (lower is better)
Translates to: LKSLPVQEDPIWISPFPHTEIRI*RPAAVM
Trigger: CATGACGGCCGCCGGCCTGCAGATCCTGATTTCGGT...ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GTACTAGCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAAGCATTCTCAAAGTCCTaGTGCAGCTCCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VLAPSSPLSLWVQRGIPKAFSKS*CSSCRE
Trigger: CTCCCTGCAGGAGCTGCAGCAGGACTTTGAGAATGC...TTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGCTAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACCTAAGTCCCAGTAGCTaGGAATGTCCTCCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LPHVFPILPPQRALQPSDLSPSS*ECPPLS
Trigger: ACTCAGAGGAGGACATTCGCAGCTACTGGGACTTAG...GTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCTAAGTCCCAGTAGCTaGGAATGTCCTCCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: QSYLHSGLCNPQTCGRSLLSPSS*ECPPLS
Trigger: ACTCAGAGGAGGACATTCGCAGCTACTGGGACTTAG...GAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGTCTCTGCGTGAAACATaGTCCCGAACATCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: QLQVTGSTISFSSEAGLGSLRET*SRTSPA
Trigger: AGCAGGAGATGTTCGGGAGCATGTTTCACGCAGAGA...CCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GTTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACAGGCGGTCAGGGTCTCTaGGTGAAACATGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: VKESSCAGRPNLDQPLSTGGQGL*VKHAPE
Trigger: TTCGGGAGCATGTTTCACGCAGAGACCCTGACCGCC...TGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp AGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGGGTTTCTAGCCGAGGACTTCCACCTTTaGCTACAGAAGGACCCCATT +
Preference number: 4 (lower is better)
Translates to: RMPDDSASYPSPSLGFLAEDFHL*LQKDPI
Trigger: AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTC...GGCTAGAAACCCCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCAACTCCAGTTCACAGAAAAGCAATaGTCCTGGGCCAAGAATGTG +
Preference number: 4 (lower is better)
Translates to: GLCNPQTCGRSLPEPQLQFTEKQ*SWAKNV
Trigger: CACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAA...CTGGAGTTGAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CAGGTAAAGAAGGATAAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCTCCACAGCGGGCTCTaGAACCCTCAGACATGTGGC +
Preference number: 4 (lower is better)
Translates to: QVKKDKADLPKGGISLMGLHSGL*NPQTCG
Trigger: GCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAG...GCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTTATCCTTCTTTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CCCTCTTTGGGGTTTCTAGCCAGCCTCCAGGGGAAGGGAGCAGCCTCTGAGGGCATTATTTCACTACTTTaGCTCCATCTTTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PSLGFLASLQGKGAASEGIISLL*LHLSCF
Trigger: GAAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAAT...GCCCTCAGAGGCTGCTCCCTTCCCCTGGAGGCTGGCTAGAAACCCCAAAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GTTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACAATGCCTTGTGGGACCTaGATGGATCCCCCGCTGAGT +
Preference number: 4 (lower is better)
Translates to: VKESSCAGRPNLDQPLSTMPCGT*MDPPLS
Trigger: ACTCAGCGGGGGATCCATCCAGGTCCCACAAGGCAT...TGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TTCCCTGTGTTGGTACTAGCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGACTGGAATTTCGACTCTaGGGCCAGCTGCAGACAGAT +
Preference number: 4 (lower is better)
Translates to: FPVLVLAPSSPLSLWVQRLEFRL*GQLQTD
Trigger: ATCTGTCTGCAGCTGGCCCCAGAGTCGAAATTCCAG...TCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGCTAGTACCAACACAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCACTCGGAGAGGTAGATaGCCACAAAGCCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: QSYLHSGLCNPQTCGRSLTRRGR*PQSQTA
Trigger: TGCAGTTTGGCTTTGTGGCCATCTACCTCTCCGAGT...GAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTGCATGTGATACTTTTTaGGCATCTTACAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: LQVTGSTISFSSEAGLGVACDTF*ASYSPR
Trigger: CCGGGGGCTGTAAGATGCCCAAAAAGTATCACATGC...AACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTACACAGGCTGGCCACCTaGGATTTTCCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KTQSGSAPFHICMQLGDVHRLAT*DFPPAP
Trigger: TGGAGCTGGAGGAAAATCCCAGGTGGCCAGCCTGTG...TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCTCTCTAGCATTTGCCTaGGCAAAGAGGACTGCGTCA +
Preference number: 4 (lower is better)
Translates to: FGTSGAGHGESQITLSFASLAFA*AKRTAS
Trigger: TGACGCAGTCCTCTTTGCCCAGGCAAATGCTAGAGA...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAATTTGGCACTTCGGGTGCTCTGACGGGTGAAGAGTaGGCTCACCAGACTCTCACT +
Preference number: 4 (lower is better)
Translates to: ELSLAKALVLLEFGTSGALTGEE*AHQTLT
Trigger: AGTGAGAGTCTGGTGAGCCCACTCTTCACCCGTCAG...AGCACCCGAAGTGCCAAATTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp ATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGGGTGTGGAGAGCACATaGTCCCTGGGTGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: ISFSSEAGLGVNDYLGVKGVEST*SLGAEL
Trigger: CAGCTCTGCACCCAGGGACCATGTGCTCTCCACACC...CTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CATAGGAGAAGATGGCCTGAGGTCCTAAGGGTGTTAAAGAGTCTTCCTGTGCAGCTAGACTCCTGGGTGTaGAGAGCACATGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: HRRRWPEVLRVLKSLPVQLDSWV*RAHGPW
Trigger: CCAGGGACCATGTGCTCTCCACACCCAGGAGTCTAG...CTGCACAGGAAGACTCTTTAACACCCTTAGGACCTCAGGCCATCTTCTCCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GAAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTCAAGGCCTAGACTCCTaGGTGTGGAGAGCACATGGT +
Preference number: 4 (lower is better)
Translates to: EDPIWISPFPHLHAVRGCQGLDS*VWRAHG
Trigger: ACCATGTGCTCTCCACACCCAGGAGTCTAGGCCTTG...ACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GTACTAGCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAAACAGCAGTGGTGGTTTaGGCAGCCTTGGGGATGATG +
Preference number: 4 (lower is better)
Translates to: VLAPSSPLSLWVQRGIPKTAVVV*AALGMM
Trigger: CATCATCCCCAAGGCTGCCCAAACCACCACTGCTGT...TTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGCTAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGGATCACTTCATCAAGTTCCCTGATGGGCCCTaGGGTCAAGGGGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: EAGLGVNDYLGVKDHFIKFPDGP*GQGGLS
Trigger: AGACAGTCCCCCTTGACCCCAGGGCCCATCAGGGAA...CTTGATGAAGTGATCCTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GTACTAGCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAAGATGTAGCGGATCCCTaGAGGACTTCCACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: VLAPSSPLSLWVQRGIPKDVADP*RTSTFA
Trigger: GGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATC...TTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGCTAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCAGGAAGACCCAATCTaGATCAGCCCCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: NLTSTAGSATLRHVADLSQEDPI*ISPFPH
Trigger: ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTG...GGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTCTTCATAGGAGAAGATaGCCTGAGGTCCTAAGGGTG +
Preference number: 4 (lower is better)
Translates to: LQVTGSTISFSSEAGLGVLHRRR*PEVLRV
Trigger: CACCCTTAGGACCTCAGGCCATCTTCTCCTATGAAG...AACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TCCCAGATAACATTGTCCTTCGCCTTCCAAGTTTTGAGTTCCATTGGCAGCCAGGGGCCAAGAATGTGTTaGCTCTTGGCCAGCACCCCC +
Preference number: 4 (lower is better)
Translates to: SQITLSFAFQVLSSIGSQGPRMC*LLASTP
Trigger: GGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCC...CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGGGTTTCTAGCCCAAACACCACAGCTTTaGTCTTGGCTGAGGAACATC +
Preference number: 4 (lower is better)
Translates to: RMPDDSASYPSPSLGFLAQTPQL*SWLRNI
Trigger: GATGTTCCTCAGCCAAGATCAAAGCTGTGGTGTTTG...GGCTAGAAACCCCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGGCCAGCACCCCCTGTCCGAAGATGTACTTaGGCACCGAAATCAGGATCT +
Preference number: 4 (lower is better)
Translates to: RKAMLLGQECVGSWPAPPVRRCT*APKSGS
Trigger: AGATCCTGATTTCGGTGCTCAAGTACATCTTCGGAC...AGGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp CATAGGAGAAGATGGCCTGAGGTCCTAAGGGTGTTAAAGAGTCTTCCTGTGCAGGCATGTAGCGAGCATTaGGCTCCTTCACCAGCACCA +
Preference number: 4 (lower is better)
Translates to: HRRRWPEVLRVLKSLPVQACSEH*APSPAP
Trigger: TGGTGCTGGTGAAGGAGCTCAATGCTCGCTACATGC...CTGCACAGGAAGACTCTTTAACACCCTTAGGACCTCAGGCCATCTTCTCCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCCTGGGGTCAAGGGGCCCACGATCTGCATGTaGTACTTTTTGGGCATCTTA +
Preference number: 4 (lower is better)
Translates to: KADLPKGGISLMGPGVKGPTICM*YFLGIL
Trigger: TAAGATGCCCAAAAAGTATCACATGCAGATCGTGGG...CCCCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAGCGGATCCCTGGAGGACTCCCACGATCTGCATGTaGTACTTTTTGGGCATCTTA +
Preference number: 4 (lower is better)
Translates to: APFHICMQLGDVADPWRTPTICM*YFLGIL
Trigger: TAAGATGCCCAAAAAGTATCACATGCAGATCGTGGG...AGTCCTCCAGGGATCCGCTACATCCCCTAACTGCATGCAGATGTGGAAAGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCCTGGGGTCAAGGGGGCTTCTCCTGCTTCTTaGGGTATTTTTGCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: KADLPKGGISLMGPGVKGASPAS*GIFAWL
Trigger: TAGCCAAGCAAAAATACCTCAAGAAGCAGGAGAAGC...CCCCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp ATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGCACCCTCTTCCCCTCTaGGTCTCTGGGTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: ISFSSEAGLGVNDYLGVKHPLPL*VSGCKE
Trigger: CTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTG...CTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GGTGGAGTAGGGGAGAGTGAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAATCGCCTTCCAAGTTTTaGGTTCCATTGGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GGVGESELSLAKALVLLESPSKF*VPLAAR
Trigger: TCTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGA...TTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTCACTCTCCCCTACTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGGATCACTTCATCAAGGACTCTGGGGCCAGCTaGAGACAGATGTTACCCACC +
Preference number: 4 (lower is better)
Translates to: EAGLGVNDYLGVKDHFIKDSGAS*RQMLPT
Trigger: GGTGGGTAACATCTGTCTGCAGCTGGCCCCAGAGTC...CTTGATGAAGTGATCCTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GAAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAGGAGCCAAAGAAGTTaGTGCAGCCGAGAGCGATCA +
Preference number: 4 (lower is better)
Translates to: EDPIWISPFPHLHAVRGCRSQRS*CSRERS
Trigger: TGATCGCTCTCGGCTGCAGCAACTTCTTTGGCTCCT...ACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GGTGGAGTAGGGGAGAGTGAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAATGCAACAGTCCAGCTTaGTCTTCCTCCACAGGTAGT +
Preference number: 4 (lower is better)
Translates to: GGVGESELSLAKALVLLECNSPA*SSSTGS
Trigger: ACTACCTGTGGAGGAAGAGCAAGCTGGACTGTTGCA...TTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTCACTCTCCCCTACTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGCAACAGTCCAGCTTaGTCTTCCTCCACAGGTAGT +
Preference number: 4 (lower is better)
Translates to: CLMCFQSYLHSGLCNPQTCNSPA*SSSTGS
Trigger: ACTACCTGTGGAGGAAGAGCAAGCTGGACTGTTGCA...TGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCTGGGAAAGACGTGCTTaGATTCTAGACTCCCATCCT +
Preference number: 4 (lower is better)
Translates to: FGTSGAGHGESQITLSFAWERRA*ILDSHP
Trigger: AGGATGGGAGTCTAGAATGCAAGCACGTCTTTCCCA...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GGATGTAGCGGATCCCTGGAGGACTTCCACCTTTGCCTACAGAAGGACCCCATTATGCTGGGAAAGACGTaGTTGCATTCTAGACTCCCA +
Preference number: 4 (lower is better)
Translates to: GCSGSLEDFHLCLQKDPIMLGKT*LHSRLP
Trigger: TGGGAGTCTAGAATGCAAGCACGTCTTTCCCAGCAT...AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp AATGTCTTCCCTCTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGGGACTGCGTCATGTATaGTGGGAAAGACGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: NVFPLPHVFPILPPQRALGLRHV*WERRAC
Trigger: GCAAGCACGTCTTTCCCAGCATACATGACGCAGTCC...CAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAGAGGGAAGACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CTCTCCCTGAGCCTCAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGCTGGGCAAAGAGGACTaGGTCATGTATGCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LSLSLNSRSLGQQSPSVLLGKED*VMYAGK
Trigger: TTTCCCAGCATACATGACGCAGTCCTCTTTGCCCAG...CAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTGAGGCTCAGGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GCCTCCATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATAGGAGGCTTGTCCATTaGGGCCAGGGCCTGACGGGT +
Preference number: 4 (lower is better)
Translates to: ASIFPASTRSRRVFFSKYRRLVH*GQGLTG
Trigger: ACCCGTCAGGCCCTGGCCGCAATGGACAAGCCTCCT...ATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGATGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAGCGGATCCCTGGAGGACTTTCACAGAAAAGCAATaGTCCTGGGCCAAGAATGTG +
Preference number: 4 (lower is better)
Translates to: APFHICMQLGDVADPWRTFTEKQ*SWAKNV
Trigger: CACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAA...AGTCCTCCAGGGATCCGCTACATCCCCTAACTGCATGCAGATGTGGAAAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCAACTCCAGTCAATGTCTTCCCTCTaGCTCATGTGTTTCCAATCT +
Preference number: 4 (lower is better)
Translates to: GLCNPQTCGRSLPEPQLQSMSSL*LMCFQS
Trigger: AGATTGGAAACACATGAGGCAGAGGGAAGACATTGA...CTGGAGTTGAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CAGGGCCTGACGGGTGAAGAGTGGGCTCACCAGACTCTCACTCCTGTAAGGGTATCAATGTCTTCCCTCTaGCTCATGTGTTTCCAATCT +
Preference number: 4 (lower is better)
Translates to: QGLTGEEWAHQTLTPVRVSMSSL*LMCFQS
Trigger: AGATTGGAAACACATGAGGCAGAGGGAAGACATTGA...TACCCTTACAGGAGTGAGAGTCTGGTGAGCCCACTCTTCACCCGTCAGGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CCA 90 bp AGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGGCCAGCACCCCCTAAGTTTCTCTCCCACTaGGTATGTCCGGTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RKAMLLGQECVGSWPAPPKFLSH*VCPVLL
Trigger: AAGAAGGACCGGACATACCCAGTGGGAGAGAAACTT...AGGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CTGGTATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTAAATGCCATGCCTTGTaGGACCTGGATGGATCCCCC +
Preference number: 4 (lower is better)
Translates to: LVSITRMPDDSASYPSPSKCHAL*DLDGSP
Trigger: GGGGGATCCATCCAGGTCCCACAAGGCATGGCATTT...AGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAAAATGCCATGCCTTGTaGGACCTGGATGGATCCCCC +
Preference number: 4 (lower is better)
Translates to: KTQSGSAPFHICMQLGDVKCHAL*DLDGSP
Trigger: GGGGGATCCATCCAGGTCCCACAAGGCATGGCATTT...TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CACCATCTGACACCGAGCCGTGTGGGCTCTGGGACACTTTTTGAAGCTTGTACAACTCGGAGAGGTAGATaGCCACAAAGCCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: HHLTPSRVGSGTLFEACTTRRGR*PQSQTA
Trigger: TGCAGTTTGGCTTTGTGGCCATCTACCTCTCCGAGT...TGTACAAGCTTCAAAAAGTGTCCCAGAGCCCACACGGCTCGGTGTCAGATGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CCA 90 bp GGTGGAGTAGGGGAGAGTGAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAAGAGGCGATGTTGGTGTaGGGGAGGTTTTTGCAAATG +
Preference number: 4 (lower is better)
Translates to: GGVGESELSLAKALVLLEEAMLV*GRFLQM
Trigger: CATTTGCAAAAACCTCCCCCACACCAACATCGCCTC...TTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTCACTCTCCCCTACTCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGGATCACTTCATCAAGGTGGGGAACCCGCGTTaGATTTCTCCCACGATCTGC +
Preference number: 4 (lower is better)
Translates to: EAGLGVNDYLGVKDHFIKVGNPR*ISPTIC
Trigger: GCAGATCGTGGGAGAAATCCAACGCGGGTTCCCCAC...CTTGATGAAGTGATCCTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTCAGGCGACACCGGGGTaGGGAACCCGCGTTGGATTT +
Preference number: 4 (lower is better)
Translates to: PDGIMNSQKSNAPGPRMCQATPG*GTRVGF
Trigger: AAATCCAACGCGGGTTCCCCACCCCGGTGTCGCCTG...ACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGCACAGGCTGGCCACCTaGGATTTTCCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: YLLLGCQMILPATHPPLWHRLAT*DFPPAP
Trigger: TGGAGCTGGAGGAAAATCCCAGGTGGCCAGCCTGTG...CCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGGCCAGCACCCCCTCTGCGTCATGTATGCTaGGAAAGACGTGCTTGCATT +
Preference number: 4 (lower is better)
Translates to: RKAMLLGQECVGSWPAPPLRHVC*ERRACI
Trigger: AATGCAAGCACGTCTTTCCCAGCATACATGACGCAG...AGGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTCTGCGTCATGTATGCTaGGAAAGACGTGCTTGCATT +
Preference number: 4 (lower is better)
Translates to: LQVTGSTISFSSEAGLGVLRHVC*ERRACI
Trigger: AATGCAAGCACGTCTTTCCCAGCATACATGACGCAG...AACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CTCTCCCTGAGCCTCAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGTCTCTAGCATTTGCCTaGGCAAAGAGGACTGCGTCA +
Preference number: 4 (lower is better)
Translates to: LSLSLNSRSLGQQSPSVLSLAFA*AKRTAS
Trigger: TGACGCAGTCCTCTTTGCCCAGGCAAATGCTAGAGA...CAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTGAGGCTCAGGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAAAGTTTTCAAGGCCTAGACTCCTaGGTGTGGAGAGCACATGGT +
Preference number: 4 (lower is better)
Translates to: APSSPLSLWVQRGIPKSFQGLDS*VWRAHG
Trigger: ACCATGTGCTCTCCACACCCAGGAGTCTAGGCCTTG...AAAACTTTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAATTTGGCACTTCGGGTGCTGAATGTGTTGGCTCTTaGCCAGCACCCCCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: ELSLAKALVLLEFGTSGAECVGS*PAPPPL
Trigger: TAAAGGAGGGGGTGCTGGCCAAGAGCCAACACATTC...AGCACCCGAAGTGCCAAATTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACGAAAAGCAATGCTCCTaGGCCAAGAATGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LPHVFPILPPQRALQPSDEKQCS*AKNVLA
Trigger: AGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTC...GTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTGGGGATCTAGATACTTaGTTCAAAGGGGACTCTGAC +
Preference number: 4 (lower is better)
Translates to: LQVTGSTISFSSEAGLGVGDLDT*FKGDSD
Trigger: GTCAGAGTCCCCTTTGAACCAAGTATCTAGATCCCC...AACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAATTTGGCACTTCGGGTGCTGGGCTGGCTCATATCTaGGGCATTTACAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ELSLAKALVLLEFGTSGAGLAHI*GIYKQW
Trigger: CCACTGCTTGTAAATGCCCCAGATATGAGCCAGCCC...AGCACCCGAAGTGCCAAATTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GAAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTCAGGCTCATCCTTTATaGAAGTCCCAAGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EDPIWISPFPHLHAVRGCQAHPL*KSQVPG
Trigger: GCCTGGCACTTGGGACTTCCATAAAGGATGAGCCTG...ACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR TCA 90 bp CTCTCCCTGAGCCTCAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGCAAACACCACAGCTTTaGTCTTGGCTGAGGAACATC +
Preference number: 4 (lower is better)
Translates to: LSLSLNSRSLGQQSPSVLQTPQL*SWLRNI
Trigger: GATGTTCCTCAGCCAAGATCAAAGCTGTGGTGTTTG...CAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTGAGGCTCAGGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGGGTTTCTAGCCCATTGGTGGCATTGTTaGAGACCTGGAATTTCGACT +
Preference number: 4 (lower is better)
Translates to: RMPDDSASYPSPSLGFLAHWWHC*RPGIST
Trigger: AGTCGAAATTCCAGGTCTTCAACAATGCCACCAATG...GGCTAGAAACCCCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp CTGGTATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTCAAAGCCAAACTGCATaGAGCCCAGACCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: LVSITRMPDDSASYPSPSQSQTA*SPDPSG
Trigger: TCCAGATGGGTCTGGGCTTCATGCAGTTTGGCTTTG...AGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp TTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACATGCATGTAGCGAGCATTaGGCTCCTTCACCAGCACCA +
Preference number: 4 (lower is better)
Translates to: LKSLPVQEDPIWISPFPHACSEH*APSPAP
Trigger: TGGTGCTGGTGAAGGAGCTCAATGCTCGCTACATGC...ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GCCTCCATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATCATGTCCTTCCACTGTaGGACCACAGGCGACACCGG +
Preference number: 4 (lower is better)
Translates to: ASIFPASTRSRRVFFSKYHVLPL*DHRRHR
Trigger: CCGGTGTCGCCTGTGGTCTCACAGTGGAAGGACATG...ATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGATGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GGTGGAGTAGGGGAGAGTGAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAAAGAAGACTTGTTAGCTaGCCAGCTCACTCAACACAC +
Preference number: 4 (lower is better)
Translates to: GGVGESELSLAKALVLLERRLVS*PAHSTH
Trigger: GTGTGTTGAGTGAGCTGGTCAGCTAACAAGTCTTCT...TTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTCACTCTCCCCTACTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp ATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGGGGTGCTGGGCACGGTaGATCCCAGATAACATTGTC +
Preference number: 4 (lower is better)
Translates to: ISFSSEAGLGVNDYLGVKGCWAR*IPDNIV
Trigger: GACAATGTTATCTGGGATTCACCGTGCCCAGCACCC...CTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CAGGTAAAGAAGGATAAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCGTAGAGGCCATTGACTaGAGGAAGGTTGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QVKKDKADLPKGGISLMGVEAID*RKVGQQ
Trigger: CTGCTGGCCAACCTTCCTGCAGTCAATGGCCTCTAC...GCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTTATCCTTCTTTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GTTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACAGCCACAAAGCCAAACTaGATGAAGCCCAGACCCATC +
Preference number: 4 (lower is better)
Translates to: VKESSCAGRPNLDQPLSTATKPN*MKPRPI
Trigger: GATGGGTCTGGGCTTCATGCAGTTTGGCTTTGTGGC...TGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAAAGTTTTTTCTCAAAGTCCTGCTaGAGCTCCTGCAGGGAGACA +
Preference number: 4 (lower is better)
Translates to: APSSPLSLWVQRGIPKSFFSKSC*SSCRET
Trigger: TGTCTCCCTGCAGGAGCTGCAGCAGGACTTTGAGAA...AAAACTTTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGGATCACTTCATCAAGGCATTCTCAAAGTCCTaGTGCAGCTCCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: EAGLGVNDYLGVKDHFIKAFSKS*CSSCRE
Trigger: CTCCCTGCAGGAGCTGCAGCAGGACTTTGAGAATGC...CTTGATGAAGTGATCCTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CATAGGAGAAGATGGCCTGAGGTCCTAAGGGTGTTAAAGAGTCTTCCTGTGCAGGGACTGCGTCATGTATaGTGGGAAAGACGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: HRRRWPEVLRVLKSLPVQGLRHV*WERRAC
Trigger: GCAAGCACGTCTTTCCCAGCATACATGACGCAGTCC...CTGCACAGGAAGACTCTTTAACACCCTTAGGACCTCAGGCCATCTTCTCCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GAAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTGCCCCTTTCCACATCTaGATGCAGTTAGGGGATGTA +
Preference number: 4 (lower is better)
Translates to: EDPIWISPFPHLHAVRGCAPFHI*MQLGDV
Trigger: TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGC...ACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAGCGGATCCCTGGAGGACTTCAATGTCTTCCCTCTaGCTCATGTGTTTCCAATCT +
Preference number: 4 (lower is better)
Translates to: APFHICMQLGDVADPWRTSMSSL*LMCFQS
Trigger: AGATTGGAAACACATGAGGCAGAGGGAAGACATTGA...AGTCCTCCAGGGATCCGCTACATCCCCTAACTGCATGCAGATGTGGAAAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TTCCCTGTGTTGGTACTAGCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAAAGTTTCTCTCCCACTaGGTATGTCCGGTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: FPVLVLAPSSPLSLWVQRKFLSH*VCPVLL
Trigger: AAGAAGGACCGGACATACCCAGTGGGAGAGAAACTT...TCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGCTAGTACCAACACAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CTGGTATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTAACGGCAAAGGTACCTaGCACCATCTGGTGAACACC +
Preference number: 4 (lower is better)
Translates to: LVSITRMPDDSASYPSPSNGKGT*HHLVNT
Trigger: GGTGTTCACCAGATGGTGCCAGGTACCTTTGCCGTT...AGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAATTTGGCACTTCGGGTGCTCTGTGTAGGAGGGGATaGTCAGTCCGAAGATGTACT +
Preference number: 4 (lower is better)
Translates to: ELSLAKALVLLEFGTSGALCRRG*SVRRCT
Trigger: AGTACATCTTCGGACTGACCATCCCCTCCTACACAG...AGCACCCGAAGTGCCAAATTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CTCTCCCTGAGCCTCAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGGCTAGTAATACTTTCTaGGGGTCCATGCCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: LSLSLNSRSLGQQSPSVLASNTF*GSMPVL
Trigger: CAAGACAGGCATGGACCCCCAGAAAGTATTACTAGC...CAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTGAGGCTCAGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAACCTCCTCTGTTGTGTaGGCCTCATTCTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: KTQSGSAPFHICMQLGDVTSSVV*ASFSAS
Trigger: AGAAGCGGAGAATGAGGCCCACACAACAGAGGAGGT...TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATTGTACACCTGGGCATaGATGTTCACCAAGAAGACC +
Preference number: 4 (lower is better)
Translates to: CLMCFQSYLHSGLCNPQTLYTWA*MFTKKT
Trigger: GGTCTTCTTGGTGAACATCCATGCCCAGGTGTACAA...TGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGGCCAGCACCCCCTCTCACTCGTAAAAGCTaGAAGTCAAGGTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RKAMLLGQECVGSWPAPPLTRKS*KSRCPS
Trigger: TGAAGGACACCTTGACTTCCAGCTTTTACGAGTGAG...AGGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGCTCACTCGTAAAAGCTaGAAGTCAAGGTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QLQVTGSTISFSSEAGLGLTRKS*KSRCPS
Trigger: TGAAGGACACCTTGACTTCCAGCTTTTACGAGTGAG...CCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACAGAAAAGCAATGCTCCTaGGCCAAGAATGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: CLMCFQSYLHSGLCNPQTEKQCS*AKNVLA
Trigger: AGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTC...TGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CTCTCCCTGAGCCTCAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGAGTGAGTTGTCATTaGCTAAGGCTCTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSLSLNSRSLGQQSPSVLRVSCH*LRLLSS
Trigger: GGAGGACAAGAGCCTTAGCCAATGACAACTCACTCT...CAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTGAGGCTCAGGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TCCCAGATAACATTGTCCTTCGCCTTCCAAGTTTTGAGTTCCATTGGCAGCCAGGGCATTTACAAGCAGTaGGTGAGCAAAGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SQITLSFAFQVLSSIGSQGIYKQ*VSKAGW
Trigger: CCAGCCGGCTTTGCTCACCCACTGCTTGTAAATGCC...CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367134.2
ENST00000367135.8
3UTR CAA 72 bp ACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATaGTCCTTCGCCTTCCAAGTTTTGAGTTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: TSGAGHGESQIT*SFAFQVLSSIG
Trigger: GCCAATGGAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp ATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGAAATGTCAGTGTCCATaGCCTGGGCCAGTGCATAGC +
Preference number: 4 (lower is better)
Translates to: ISFSSEAGLGVNDYLGVKKCQCP*PGPVHS
Trigger: GCTATGCACTGGCCCAGGTCATGGACACTGACATTT...CTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp CACATGGAACCTATTTATTTTCAAGTCAACAGTAGGGTTCCTCTCAATACCTCCAGGGAGGCATTTCCCTaGTGGGCCCTGGGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: HMEPIYFQVNSRVPLNTSREAFP*WALGSR
Trigger: CCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCT...GGAGGTATTGAGAGGAACCCTACTGTTGACTTGAAAATAAATAGGTTCCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGAGAAGACTTGTTAGCTaGCCAGCTCACTCAACACAC +
Preference number: 4 (lower is better)
Translates to: RSLGQQSPSVLRLVWGLMRRLVS*PAHSTH
Trigger: GTGTGTTGAGTGAGCTGGTCAGCTAACAAGTCTTCT...CATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACATGAGGGTAAGGGAGTATaGGGCTCTGTCTACCACGTA +
Preference number: 4 (lower is better)
Translates to: LKSLPVQEDPIWISPFPHEGKGV*GSVYHV
Trigger: TACGTGGTAGACAGAGCCGCATACTCCCTTACCCTC...ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTAGCGTAGCTGACACGTaGAGCCTCTCAGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: PDGIMNSQKSNAPGPRMCSVADT*SLSASM
Trigger: CATGGAGGCTGAGAGGCTGCACGTGTCAGCTACGCT...ACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CAGGTAAAGAAGGATAAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCGCCACAAAGCCAAACTaGATGAAGCCCAGACCCATC +
Preference number: 4 (lower is better)
Translates to: QVKKDKADLPKGGISLMGATKPN*MKPRPI
Trigger: GATGGGTCTGGGCTTCATGCAGTTTGGCTTTGTGGC...GCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTTATCCTTCTTTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CAGGTAAAGAAGGATAAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCCCGGAGATAGCTGTTaGCACCACCACCACAATCAT +
Preference number: 4 (lower is better)
Translates to: QVKKDKADLPKGGISLMGPGDSC*HHHHNH
Trigger: ATGATTGTGGTGGTGGTGGCAACAGCTATCTCCGGG...GCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTTATCCTTCTTTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CATAGGAGAAGATGGCCTGAGGTCCTAAGGGTGTTAAAGAGTCTTCCTGTGCAGCTAGGGAGAAGGCTGTaGCTATCATGTCCTTCCACT +
Preference number: 4 (lower is better)
Translates to: HRRRWPEVLRVLKSLPVQLGRRL*LSCPST
Trigger: AGTGGAAGGACATGATAGGCACAGCCTTCTCCCTAG...CTGCACAGGAAGACTCTTTAACACCCTTAGGACCTCAGGCCATCTTCTCCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGAGGAGCCAAAGAAGTTaGTGCAGCCGAGAGCGATCA +
Preference number: 4 (lower is better)
Translates to: YLLLGCQMILPATHPPLWRSQRS*CSRERS
Trigger: TGATCGCTCTCGGCTGCAGCAACTTCTTTGGCTCCT...CCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAAAGTTTTCATGACCTGGGCCAGTaGATAGCCATTTCGAAACTG +
Preference number: 4 (lower is better)
Translates to: APSSPLSLWVQRGIPKSFHDLGQ*IAISKL
Trigger: CAGTTTCGAAATGGCTATGCACTGGCCCAGGTCATG...AAAACTTTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp ATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGGGACTGCGTCATGTATaGTGGGAAAGACGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: ISFSSEAGLGVNDYLGVKGLRHV*WERRAC
Trigger: GCAAGCACGTCTTTCCCAGCATACATGACGCAGTCC...CTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp AAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTACTGGGCAAAGAGGACTaGGTCATGTATGCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: KTQSGSAPFHICMQLGDVLGKED*VMYAGK
Trigger: TTTCCCAGCATACATGACGCAGTCCTCTTTGCCCAG...TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp AAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAGCCCCTTTCCACATCTaGATGCAGTTAGGGGATGTA +
Preference number: 4 (lower is better)
Translates to: KTQSGSAPFHICMQLGDVAPFHI*MQLGDV
Trigger: TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGC...TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TCCCAGATAACATTGTCCTTCGCCTTCCAAGTTTTGAGTTCCATTGGCAGCCAGAACGGCAAAGGTACCTaGCACCATCTGGTGAACACC +
Preference number: 4 (lower is better)
Translates to: SQITLSFAFQVLSSIGSQNGKGT*HHLVNT
Trigger: GGTGTTCACCAGATGGTGCCAGGTACCTTTGCCGTT...CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GTTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACAGCATTGTTGAAGACCTaGAATTTCGACTCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: VKESSCAGRPNLDQPLSTALLKT*NFDSGA
Trigger: GGCCCCAGAGTCGAAATTCCAGGTCTTCAACAATGC...TGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CTGGTATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTCTGTGTAGGAGGGGATaGTCAGTCCGAAGATGTACT +
Preference number: 4 (lower is better)
Translates to: LVSITRMPDDSASYPSPSLCRRG*SVRRCT
Trigger: AGTACATCTTCGGACTGACCATCCCCTCCTACACAG...AGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TCAGGGGATCTAGATACTTGGTTCAAAGGGGACTCTGACTTGGAAATTCCTGAGAAAGACGATGGACCCTaGGCCTGTGTAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: SGDLDTWFKGDSDLEIPEKDDGP*ACVGGD
Trigger: ATCCCCTCCTACACAGGCCCAGGGTCCATCGTCTTT...CTCAGGAATTTCCAAGTCAGAGTCCCCTTTGAACCAAGTATCTAGATCCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAGCATGTGATACTTTTTaGGCATCTTACAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: KTQSGSAPFHICMQLGDVACDTF*ASYSPR
Trigger: CCGGGGGCTGTAAGATGCCCAAAAAGTATCACATGC...TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AATGTCTTCCCTCTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGGCTAGTAATACTTTCTaGGGGTCCATGCCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: NVFPLPHVFPILPPQRALASNTF*GSMPVL
Trigger: CAAGACAGGCATGGACCCCCAGAAAGTATTACTAGC...CAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAGAGGGAAGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TCCCAGATAACATTGTCCTTCGCCTTCCAAGTTTTGAGTTCCATTGGCAGCCAGACCTCCTCTGTTGTGTaGGCCTCATTCTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SQITLSFAFQVLSSIGSQTSSVV*ASFSAS
Trigger: AGAAGCGGAGAATGAGGCCCACACAACAGAGGAGGT...CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AGAGATAAGGTTCCCAGTCCTCCCTGGGAATTATATTATCACAGGTCAGTATCAGAAGGTGACGAAGGGTaGGACGCTGGCCAGCATGTC +
Preference number: 4 (lower is better)
Translates to: RDKVPSPPWELYYHRSVSEGDEG*DAGQHV
Trigger: GACATGCTGGCCAGCGTCCCACCCTTCGTCACCTTC...TGATACTGACCTGTGATAATATAATTCCCAGGGAGGACTGGGAACCTTATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCATCAAAGACGCCTCCATaGCTAATGTCATTGTACACC +
Preference number: 4 (lower is better)
Translates to: CVSNLTSTAGSATLRHVASKTPP*LMSLYT
Trigger: GGTGTACAATGACATTAGCCATGGAGGCGTCTTTGA...TGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GGTGGAGTAGGGGAGAGTGAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAATCAAAGACGCCTCCATaGCTAATGTCATTGTACACC +
Preference number: 4 (lower is better)
Translates to: GGVGESELSLAKALVLLESKTPP*LMSLYT
Trigger: GGTGTACAATGACATTAGCCATGGAGGCGTCTTTGA...TTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTCACTCTCCCCTACTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AGAGATAAGGTTCCCAGTCCTCCCTGGGAATTATATTATCACAGGTCAGTATCATCAAGGGGGACTGTCTaGGCCCAGGTCCCATCCGTT +
Preference number: 4 (lower is better)
Translates to: RDKVPSPPWELYYHRSVSSRGTV*AQVPSV
Trigger: AACGGATGGGACCTGGGCCCAGACAGTCCCCCTTGA...TGATACTGACCTGTGATAATATAATTCCCAGGGAGGACTGGGAACCTTATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGAGAGTGAGTTGTCATTaGCTAAGGCTCTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RSLGQQSPSVLRLVWGLMRVSCH*LRLLSS
Trigger: GGAGGACAAGAGCCTTAGCCAATGACAACTCACTCT...CATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GAAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTGGGGATCTAGATACTTaGTTCAAAGGGGACTCTGAC +
Preference number: 4 (lower is better)
Translates to: EDPIWISPFPHLHAVRGCGDLDT*FKGDSD
Trigger: GTCAGAGTCCCCTTTGAACCAAGTATCTAGATCCCC...ACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
3UTR CAA 72 bp AAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTaGGCCAGCACCCCCTCCTTTAACTCTAAGAAGACT +
Preference number: 4 (lower is better)
Translates to: KSNAPGPRMCWL*ASTPSFNSKKT
Trigger: AGTCTTCTTAGAGTTAAAGGAGGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGGCTTCTCCTGCTTCTTaGGGTATTTTTGCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: RSLGQQSPSVLRLVWGLMASPAS*GIFAWL
Trigger: TAGCCAAGCAAAAATACCTCAAGAAGCAGGAGAAGC...CATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp CCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTGATGTTTCAGGAGGCTaGGGCAGAACCTTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: PDGIMNSQKSNAPGPRMCDVSGG*GRTLVG
Trigger: GCCCACTAAGGTTCTGCCTCAGCCTCCTGAAACATC...ACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp TTCCCTGTGTTGGTACTAGCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAAAGGGGTTGTTAAGCTaGAGAAGCTTGAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: FPVLVLAPSSPLSLWVQRKGLLS*RSLRKA
Trigger: TGCTTTTCTCAAGCTTCTTCAGCTTAACAACCCCTT...TCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGCTAGTACCAACACAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp ATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCGGCCAGCAGAGCAAATaGCATGCCTTGTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: IFPASTRSRRVFFSKYSSGQQSK*HALWDL
Trigger: CAGGTCCCACAAGGCATGGCATTTGCTCTGCTGGCC...GCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TCCCAGATAACATTGTCCTTCGCCTTCCAAGTTTTGAGTTCCATTGGCAGCCAGCTAGGGAGAAGGCTGTaGCTATCATGTCCTTCCACT +
Preference number: 4 (lower is better)
Translates to: SQITLSFAFQVLSSIGSQLGRRL*LSCPST
Trigger: AGTGGAAGGACATGATAGGCACAGCCTTCTCCCTAG...CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TCCCAGATAACATTGTCCTTCGCCTTCCAAGTTTTGAGTTCCATTGGCAGCCAGTGCAACAGTCCAGCTTaGTCTTCCTCCACAGGTAGT +
Preference number: 4 (lower is better)
Translates to: SQITLSFAFQVLSSIGSQCNSPA*SSSTGS
Trigger: ACTACCTGTGGAGGAAGAGCAAGCTGGACTGTTGCA...CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GTTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACATGGGAAAGACGTGCTTaGATTCTAGACTCCCATCCT +
Preference number: 4 (lower is better)
Translates to: VKESSCAGRPNLDQPLSTWERRA*ILDSHP
Trigger: AGGATGGGAGTCTAGAATGCAAGCACGTCTTTCCCA...TGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CTGGTATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTATGCTGGGAAAGACGTaGTTGCATTCTAGACTCCCA +
Preference number: 4 (lower is better)
Translates to: LVSITRMPDDSASYPSPSMLGKT*LHSRLP
Trigger: TGGGAGTCTAGAATGCAAGCACGTCTTTCCCAGCAT...AGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACATCTAAGTCCCAGTAGCTaGGAATGTCCTCCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LKSLPVQEDPIWISPFPHLSPSS*ECPPLS
Trigger: ACTCAGAGGAGGACATTCGCAGCTACTGGGACTTAG...ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TCCCAGATAACATTGTCCTTCGCCTTCCAAGTTTTGAGTTCCATTGGCAGCCAGGAGGACTTCCACCTTTaGCTACAGAAGGACCCCATT +
Preference number: 4 (lower is better)
Translates to: SQITLSFAFQVLSSIGSQEDFHL*LQKDPI
Trigger: AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTC...CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TCCCAGATAACATTGTCCTTCGCCTTCCAAGTTTTGAGTTCCATTGGCAGCCAGGCCCCTTTCCACATCTaGATGCAGTTAGGGGATGTA +
Preference number: 4 (lower is better)
Translates to: SQITLSFAFQVLSSIGSQAPFHI*MQLGDV
Trigger: TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGC...CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAAAGTTTTAAGTTTCTCTCCCACTaGGTATGTCCGGTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: APSSPLSLWVQRGIPKSFKFLSH*VCPVLL
Trigger: AAGAAGGACCGGACATACCCAGTGGGAGAGAAACTT...AAAACTTTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCAAAGCCCAGACCCATCTaGATGATGGCGGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SFLLQPGPEECSFPNIPAKPRPI*MMAVRQ
Trigger: CTGCCTCACCGCCATCATCCAGATGGGTCTGGGCTT...TGCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp ATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCAAGCCCAGACCCATCTaGATGATGGCGGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: IFPASTRSRRVFFSKYSSKPRPI*MMAVRQ
Trigger: CTGCCTCACCGCCATCATCCAGATGGGTCTGGGCTT...GCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGGAGGCGATGTTGGTGTaGGGGAGGTTTTTGCAAATG +
Preference number: 4 (lower is better)
Translates to: YLLLGCQMILPATHPPLWEAMLV*GRFLQM
Trigger: CATTTGCAAAAACCTCCCCCACACCAACATCGCCTC...CCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AAAAGTTTTGTGCAGAATAACTGGTATCTATTACTAGGATGCCAGATGATTCTGGGCCTCAGCGGAGGCTaGTGGCTCACTCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KSFVQNNWYLLLGCQMILGLSGG*WLTLGR
Trigger: CCTGCCCAGAGTGAGCCACCAGCCTCCGCTGAGGCC...CAGAATCATCTGGCATCCTAGTAATAGATACCAGTTATTCTGCACAAAACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CATAGGAGAAGATGGCCTGAGGTCCTAAGGGTGTTAAAGAGTCTTCCTGTGCAGTTGGAAGTTGTGTCCTaGGGTCACGTCTCTAGCATT +
Preference number: 4 (lower is better)
Translates to: HRRRWPEVLRVLKSLPVQLEVVS*GHVSSI
Trigger: AATGCTAGAGACGTGACCCCAGGACACAACTTCCAA...CTGCACAGGAAGACTCTTTAACACCCTTAGGACCTCAGGCCATCTTCTCCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGCTTCATAGGAGAAGATaGCCTGAGGTCCTAAGGGTG +
Preference number: 4 (lower is better)
Translates to: YLLLGCQMILPATHPPLWLHRRR*PEVLRV
Trigger: CACCCTTAGGACCTCAGGCCATCTTCTCCTATGAAG...CCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GCAGGCCAGCACAGTTGTACTTGTCCTTCTGTTTTTGGCTCACTCGTAAAAGCTCACACAACGCAGGTCTaGCTGAAGTTAGAAATGGGG +
Preference number: 4 (lower is better)
Translates to: AGQHSCTCPSVFGSLVKAHTTQV*LKLEMG
Trigger: CCCCATTTCTAACTTCAGCCAGACCTGCGTTGTGTG...AGCTTTTACGAGTGAGCCAAAAACAGAAGGACAAGTACAACTGTGCTGGCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CCA 90 bp TGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACAAGTTTTGAGTTCCATTaGCAGCCAGATGGCATAATG +
Preference number: 4 (lower is better)
Translates to: CLMCFQSYLHSGLCNPQTSFEFH*QPDGIM
Trigger: CATTATGCCATCTGGCTGCCAATGGAACTCAAAACT...TGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAAGTTTTGAGTTCCATTaGCAGCCAGATGGCATAATG +
Preference number: 4 (lower is better)
Translates to: CVSNLTSTAGSATLRHVASFEFH*QPDGIM
Trigger: CATTATGCCATCTGGCTGCCAATGGAACTCAAAACT...TGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAGGGGATCTAGATACTTaGTTCAAAGGGGACTCTGAC +
Preference number: 4 (lower is better)
Translates to: KTQSGSAPFHICMQLGDVGDLDT*FKGDSD
Trigger: GTCAGAGTCCCCTTTGAACCAAGTATCTAGATCCCC...TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACGGGTTAATGATTACTTaGGGGTTAAGGATCACTTCA +
Preference number: 4 (lower is better)
Translates to: LPHVFPILPPQRALQPSDGLMIT*GLRITS
Trigger: TGAAGTGATCCTTAACCCCCAAGTAATCATTAACCC...GTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AGAGATAAGGTTCCCAGTCCTCCCTGGGAATTATATTATCACAGGTCAGTATCAGAGGAACCCAAGCTCTaGGGGATGCACTTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: RDKVPSPPWELYYHRSVSEEPKL*GMHFPP
Trigger: CGGAGGAAAGTGCATCCCCCAGAGCTTGGGTTCCTC...TGATACTGACCTGTGATAATATAATTCCCAGGGAGGACTGGGAACCTTATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367135.8
3UTR CAA 72 bp TTCAGTTCTGAGGCTGGTCTGGGGGTTAATGATTACTaGGGGGTTAAGGATCACTTCATCAAGTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: FSSEAGLGVNDY*GVKDHFIKSSG
Trigger: CCCTGAGGACTTGATGAAGTGATCCTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTCAGAACTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAAAGTTTTCATTGGTGGCATTGTTaGAGACCTGGAATTTCGACT +
Preference number: 4 (lower is better)
Translates to: APSSPLSLWVQRGIPKSFHWWHC*RPGIST
Trigger: AGTCGAAATTCCAGGTCTTCAACAATGCCACCAATG...AAAACTTTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp TTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACATGTCCGAAGATGTACTTaGGCACCGAAATCAGGATCT +
Preference number: 4 (lower is better)
Translates to: LKSLPVQEDPIWISPFPHVRRCT*APKSGS
Trigger: AGATCCTGATTTCGGTGCTCAAGTACATCTTCGGAC...ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp TATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGGTCCGAAGATGTACTTaGGCACCGAAATCAGGATCT +
Preference number: 4 (lower is better)
Translates to: YLLLGCQMILPATHPPLWVRRCT*APKSGS
Trigger: AGATCCTGATTTCGGTGCTCAAGTACATCTTCGGAC...CCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp CTGGTATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTCCCACGATCTGCATGTaGTACTTTTTGGGCATCTTA +
Preference number: 4 (lower is better)
Translates to: LVSITRMPDDSASYPSPSPTICM*YFLGIL
Trigger: TAAGATGCCCAAAAAGTATCACATGCAGATCGTGGG...AGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp CTGGTATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTGCTTCTCCTGCTTCTTaGGGTATTTTTGCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: LVSITRMPDDSASYPSPSASPAS*GIFAWL
Trigger: TAGCCAAGCAAAAATACCTCAAGAAGCAGGAGAAGC...AGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GCCTCCATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCAAGTCCACGAAGCTaGCTCCACTCATGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ASIFPASTRSRRVFFSKYSSPRS*LHSCPG
Trigger: TCCTGGACATGAGTGGAGTCAGCTTCGTGGACTTGA...ATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGATGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp ATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGGATGTTTCAGGAGGCTaGGGCAGAACCTTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: IMNSQKSNAPGPRMCWLLDVSGG*GRTLVG
Trigger: GCCCACTAAGGTTCTGCCTCAGCCTCCTGAAACATC...CAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GAAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAAGGAAGAGTTAACATaGTTGGCTCTTTGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: EDPIWISPFPHLHAVRGCKEELT*LALCQV
Trigger: TACCTGGCAAAGAGCCAATCATGTTAACTCTTCCTT...ACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp GCAGGCCAGCACAGTTGTACTTGTCCTTCTGTTTTTGGCTCACTCGTAAAAGCTAGAAGACTTGTTAGCTaGCCAGCTCACTCAACACAC +
Preference number: 4 (lower is better)
Translates to: AGQHSCTCPSVFGSLVKARRLVS*PAHSTH
Trigger: GTGTGTTGAGTGAGCTGGTCAGCTAACAAGTCTTCT...AGCTTTTACGAGTGAGCCAAAAACAGAAGGACAAGTACAACTGTGCTGGCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR GCA 90 bp CTGGTATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGCGATGACCTTTTaGCTGAAGATCTCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: LVSITRMPDDSASYPSPSLAMTF*LKISEL
Trigger: CAACTCAGAGATCTTCAGGCAAAAGGTCATCGCCAA...AGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCAGCATTCTCAAAGTCCTaGTGCAGCTCCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SFLLQPGPEECSFPNIPAAFSKS*CSSCRE
Trigger: CTCCCTGCAGGAGCTGCAGCAGGACTTTGAGAATGC...TGCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACATTGGGAAAGACGTGCTTaGATTCTAGACTCCCATCCT +
Preference number: 4 (lower is better)
Translates to: LKSLPVQEDPIWISPFPHWERRA*ILDSHP
Trigger: AGGATGGGAGTCTAGAATGCAAGCACGTCTTTCCCA...ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GCCTCCATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATCACGTCTCTAGCATTTaGCTGGGCAAAGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: ASIFPASTRSRRVFFSKYHVSSI*LGKEDC
Trigger: GCAGTCCTCTTTGCCCAGGCAAATGCTAGAGACGTG...ATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGATGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp AGAGATAAGGTTCCCAGTCCTCCCTGGGAATTATATTATCACAGGTCAGTATCAAAGGTGTCCTTCAGCTaGCAAGGACAGGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RDKVPSPPWELYYHRSVSKVSFS*QGQGRG
Trigger: ACCTCTGCCCTGTCCTTGGCAGCTGAAGGACACCTT...TGATACTGACCTGTGATAATATAATTCCCAGGGAGGACTGGGAACCTTATCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCATATCTATTACTAGGATaGCAGATGATTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: CVSNLTSTAGSATLRHVAYLLLG*QMILPA
Trigger: AGCTGGCAGAATCATCTGGCATCCTAGTAATAGATA...TGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp ATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCGAGACACACACAGGCTaGCCACCTGGGATTTTCCTC +
Preference number: 4 (lower is better)
Translates to: IFPASTRSRRVFFSKYSSETHTG*PPGIFL
Trigger: GAGGAAAATCCCAGGTGGCCAGCCTGTGTGTGTCTC...GCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGTTGTACACCTGGGCATaGATGTTCACCAAGAAGACC +
Preference number: 4 (lower is better)
Translates to: YLLLGCQMILPATHPPLWLYTWA*MFTKKT
Trigger: GGTCTTCTTGGTGAACATCCATGCCCAGGTGTACAA...CCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAAAGTTTTTCAAAGACGCCTCCATaGCTAATGTCATTGTACACC +
Preference number: 4 (lower is better)
Translates to: APSSPLSLWVQRGIPKSFSKTPP*LMSLYT
Trigger: GGTGTACAATGACATTAGCCATGGAGGCGTCTTTGA...AAAACTTTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACATTTGGAAGTTGTGTCCTaGGGTCACGTCTCTAGCATT +
Preference number: 4 (lower is better)
Translates to: LKSLPVQEDPIWISPFPHLEVVS*GHVSSI
Trigger: AATGCTAGAGACGTGACCCCAGGACACAACTTCCAA...ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCAACAGCAGTGGTGGTTTaGGCAGCCTTGGGGATGATG +
Preference number: 4 (lower is better)
Translates to: SFLLQPGPEECSFPNIPATAVVV*AALGMM
Trigger: CATCATCCCCAAGGCTGCCCAAACCACCACTGCTGT...TGCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GCCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGCAGGAAGACCCAATCTaGATCAGCCCCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: ARWHNEFTEKQCSWAKNVQEDPI*ISPFPH
Trigger: ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTG...CACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGGATCACTTCATCAAGGTTCTGAGGCTGGTCTaGGGGTTAATGATTACTTGG +
Preference number: 4 (lower is better)
Translates to: EAGLGVNDYLGVKDHFIKVLRLV*GLMITW
Trigger: CCAAGTAATCATTAACCCCCAGACCAGCCTCAGAAC...CTTGATGAAGTGATCCTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp TCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCAAAATGTCAGTGTCCATaGCCTGGGCCAGTGCATAGC +
Preference number: 4 (lower is better)
Translates to: SFLLQPGPEECSFPNIPAKCQCP*PGPVHS
Trigger: GCTATGCACTGGCCCAGGTCATGGACACTGACATTT...TGCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp TCAGGGGATCTAGATACTTGGTTCAAAGGGGACTCTGACTTGGAAATTCCTGAGTTGCCTGAAGATCTCTaGGTTGGCAAAGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SGDLDTWFKGDSDLEIPELPEDL*VGKVER
Trigger: CCTCTCTACTTTGCCAACTCAGAGATCTTCAGGCAA...CTCAGGAATTTCCAAGTCAGAGTCCCCTTTGAACCAAGTATCTAGATCCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp CACATGGAACCTATTTATTTTCAAGTCAACAGTAGGGTTCCTCTCAATACCTCCGGGTGCTGGGCACGGTaGATCCCAGATAACATTGTC +
Preference number: 4 (lower is better)
Translates to: HMEPIYFQVNSRVPLNTSGCWAR*IPDNIV
Trigger: GACAATGTTATCTGGGATTCACCGTGCCCAGCACCC...GGAGGTATTGAGAGGAACCCTACTGTTGACTTGAAAATAAATAGGTTCCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp ATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGGAGGGTAAGGGAGTATaGGGCTCTGTCTACCACGTA +
Preference number: 4 (lower is better)
Translates to: IMNSQKSNAPGPRMCWLLEGKGV*GSVYHV
Trigger: TACGTGGTAGACAGAGCCGCATACTCCCTTACCCTC...CAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp AGAGATAAGGTTCCCAGTCCTCCCTGGGAATTATATTATCACAGGTCAGTATCACCCGGAGATAGCTGTTaGCACCACCACCACAATCAT +
Preference number: 4 (lower is better)
Translates to: RDKVPSPPWELYYHRSVSPGDSC*HHHHNH
Trigger: ATGATTGTGGTGGTGGTGGCAACAGCTATCTCCGGG...TGATACTGACCTGTGATAATATAATTCCCAGGGAGGACTGGGAACCTTATCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTCTAGGGAGAAGGCTGTaGCTATCATGTCCTTCCACT +
Preference number: 4 (lower is better)
Translates to: PDGIMNSQKSNAPGPRMCLGRRL*LSCPST
Trigger: AGTGGAAGGACATGATAGGCACAGCCTTCTCCCTAG...ACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CAGGTAAAGAAGGATAAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCTTGGCGATGACCTTTTaGCTGAAGATCTCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: QVKKDKADLPKGGISLMGLAMTF*LKISEL
Trigger: CAACTCAGAGATCTTCAGGCAAAAGGTCATCGCCAA...GCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTTATCCTTCTTTACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp AGAGATAAGGTTCCCAGTCCTCCCTGGGAATTATATTATCACAGGTCAGTATCACACGTCTCTAGCATTTaGCTGGGCAAAGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: RDKVPSPPWELYYHRSVSHVSSI*LGKEDC
Trigger: GCAGTCCTCTTTGCCCAGGCAAATGCTAGAGACGTG...TGATACTGACCTGTGATAATATAATTCCCAGGGAGGACTGGGAACCTTATCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAATTTGGCACTTCGGGTGCTTATCTATTACTAGGATaGCAGATGATTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: ELSLAKALVLLEFGTSGAYLLLG*QMILPA
Trigger: AGCTGGCAGAATCATCTGGCATCCTAGTAATAGATA...AGCACCCGAAGTGCCAAATTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp ATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGTTCACAGAAAAGCAATaGTCCTGGGCCAAGAATGTG +
Preference number: 4 (lower is better)
Translates to: ISFSSEAGLGVNDYLGVKFTEKQ*SWAKNV
Trigger: CACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAA...CTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp GCCTCCATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTGCCTCCATCTTTCCTaGTTCAACCAGGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: ASIFPASTRSRRVFFSKYCLHLS*FNQVQK
Trigger: CTTCTGGACCTGGTTGAAGCAGGAAAGATGGAGGCA...ATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGATGGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGCCTCCATCTTTCCTaGTTCAACCAGGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PDGIMNSQKSNAPGPRMCCLHLS*FNQVQK
Trigger: CTTCTGGACCTGGTTGAAGCAGGAAAGATGGAGGCA...ACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACAATTATTTCACTACTTTaGCTCCATCTTTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CLMCFQSYLHSGLCNPQTIISLL*LHLSCF
Trigger: GAAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAAT...TGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AGAGATAAGGTTCCCAGTCCTCCCTGGGAATTATATTATCACAGGTCAGTATCAAACGGCAAAGGTACCTaGCACCATCTGGTGAACACC +
Preference number: 4 (lower is better)
Translates to: RDKVPSPPWELYYHRSVSNGKGT*HHLVNT
Trigger: GGTGTTCACCAGATGGTGCCAGGTACCTTTGCCGTT...TGATACTGACCTGTGATAATATAATTCCCAGGGAGGACTGGGAACCTTATCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTCAGGAAGACCCAATCTaGATCAGCCCCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: PDGIMNSQKSNAPGPRMCQEDPI*ISPFPH
Trigger: ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTG...ACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CTGGTATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTCCATTGGCAGCCAGATaGCATAATGAATTCACAGAA +
Preference number: 4 (lower is better)
Translates to: LVSITRMPDDSASYPSPSPLAAR*HNEFTE
Trigger: TTCTGTGAATTCATTATGCCATCTGGCTGCCAATGG...AGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TCAGGGGATCTAGATACTTGGTTCAAAGGGGACTCTGACTTGGAAATTCCTGAGAAGGGGACTCTGACTTaGAAATTCCTGAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SGDLDTWFKGDSDLEIPEKGTLT*KFLRLC
Trigger: ACAGAGCCTCAGGAATTTCCAAGTCAGAGTCCCCTT...CTCAGGAATTTCCAAGTCAGAGTCCCCTTTGAACCAAGTATCTAGATCCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TCAGGGGATCTAGATACTTGGTTCAAAGGGGACTCTGACTTGGAAATTCCTGAGGTTCTGAGGCTGGTCTaGGGGTTAATGATTACTTGG +
Preference number: 4 (lower is better)
Translates to: SGDLDTWFKGDSDLEIPEVLRLV*GLMITW
Trigger: CCAAGTAATCATTAACCCCCAGACCAGCCTCAGAAC...CTCAGGAATTTCCAAGTCAGAGTCCCCTTTGAACCAAGTATCTAGATCCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp TTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACATCAGTCTTGGTTTTCATaGATAGAGACCTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LKSLPVQEDPIWISPFPHQSWFS*IETSSV
Trigger: AACAGAGGAGGTCTCTATTCATGAAAACCAAGACTG...ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp CACATGGAACCTATTTATTTTCAAGTCAACAGTAGGGTTCCTCTCAATACCTCCTCAAGTCCACGAAGCTaGCTCCACTCATGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: HMEPIYFQVNSRVPLNTSSSPRS*LHSCPG
Trigger: TCCTGGACATGAGTGGAGTCAGCTTCGTGGACTTGA...GGAGGTATTGAGAGGAACCCTACTGTTGACTTGAAAATAAATAGGTTCCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AGAGATAAGGTTCCCAGTCCTCCCTGGGAATTATATTATCACAGGTCAGTATCATCGCCTTCCAAGTTTTaGGTTCCATTGGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RDKVPSPPWELYYHRSVSSPSKF*VPLAAR
Trigger: TCTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGA...TGATACTGACCTGTGATAATATAATTCCCAGGGAGGACTGGGAACCTTATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp AAAAGCATTGAAATTCTGGATTATTTCACTACTTTGCCTCCATCTTTCCTGCTTACCGAAATCAGGATCTaGAGGCCGGCGGCCGTCATG +
Preference number: 4 (lower is better)
Translates to: KSIEILDYFTTLPPSFLLTEIRI*RPAAVM
Trigger: CATGACGGCCGCCGGCCTGCAGATCCTGATTTCGGT...AAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAATCCAGAATTTCAATGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp AGAGATAAGGTTCCCAGTCCTCCCTGGGAATTATATTATCACAGGTCAGTATCAAGCCAAAGAAGTTGCTaGAGCCGAGAGCGATCATCT +
Preference number: 4 (lower is better)
Translates to: RDKVPSPPWELYYHRSVSSQRSC*SRERSS
Trigger: AGATGATCGCTCTCGGCTGCAGCAACTTCTTTGGCT...TGATACTGACCTGTGATAATATAATTCCCAGGGAGGACTGGGAACCTTATCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp ATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGATTCTCCGCTTCTCCTaGTTCTTGAGGTATTTTTGC +
Preference number: 4 (lower is better)
Translates to: ISFSSEAGLGVNDYLGVKILRFS*FLRYFC
Trigger: GCAAAAATACCTCAAGAAGCAGGAGAAGCGGAGAAT...CTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp TATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGATTCTCCGCTTCTCCTaGTTCTTGAGGTATTTTTGC +
Preference number: 4 (lower is better)
Translates to: YLLLGCQMILPATHPPLWILRFS*FLRYFC
Trigger: GCAAAAATACCTCAAGAAGCAGGAGAAGCGGAGAAT...CCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp ATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCTCTCTGCGTGAAACATaGTCCCGAACATCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: IFPASTRSRRVFFSKYSSSLRET*SRTSPA
Trigger: AGCAGGAGATGTTCGGGAGCATGTTTCACGCAGAGA...GCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AGAGATAAGGTTCCCAGTCCTCCCTGGGAATTATATTATCACAGGTCAGTATCAGCATTGTTGAAGACCTaGAATTTCGACTCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: RDKVPSPPWELYYHRSVSALLKT*NFDSGA
Trigger: GGCCCCAGAGTCGAAATTCCAGGTCTTCAACAATGC...TGATACTGACCTGTGATAATATAATTCCCAGGGAGGACTGGGAACCTTATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp ATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCACTCGGAGAGGTAGATaGCCACAAAGCCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: IFPASTRSRRVFFSKYSSTRRGR*PQSQTA
Trigger: TGCAGTTTGGCTTTGTGGCCATCTACCTCTCCGAGT...GCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GTTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACAATGATTTTAATCCCCTaGATATCCTGGGCCCTATTA +
Preference number: 4 (lower is better)
Translates to: VKESSCAGRPNLDQPLSTMILIP*ISWALL
Trigger: TAATAGGGCCCAGGATATCCAGGGGATTAAAATCAT...TGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GCCTCCATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATCTGCGTCATGTATGCTaGGAAAGACGTGCTTGCATT +
Preference number: 4 (lower is better)
Translates to: ASIFPASTRSRRVFFSKYLRHVC*ERRACI
Trigger: AATGCAAGCACGTCTTTCCCAGCATACATGACGCAG...ATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGATGGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TCCCAGATAACATTGTCCTTCGCCTTCCAAGTTTTGAGTTCCATTGGCAGCCAGCCATTGGCAGCCAGATaGCATAATGAATTCACAGAA +
Preference number: 4 (lower is better)
Translates to: SQITLSFAFQVLSSIGSQPLAAR*HNEFTE
Trigger: TTCTGTGAATTCATTATGCCATCTGGCTGCCAATGG...CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTAAGGGGACTCTGACTTaGAAATTCCTGAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PDGIMNSQKSNAPGPRMCKGTLT*KFLRLC
Trigger: ACAGAGCCTCAGGAATTTCCAAGTCAGAGTCCCCTT...ACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CACATGGAACCTATTTATTTTCAAGTCAACAGTAGGGTTCCTCTCAATACCTCCGGGCTGGCTCATATCTaGGGCATTTACAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: HMEPIYFQVNSRVPLNTSGLAHI*GIYKQW
Trigger: CCACTGCTTGTAAATGCCCCAGATATGAGCCAGCCC...GGAGGTATTGAGAGGAACCCTACTGTTGACTTGAAAATAAATAGGTTCCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp ATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGTTGCCTGAAGATCTCTaGGTTGGCAAAGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: IMNSQKSNAPGPRMCWLLLPEDL*VGKVER
Trigger: CCTCTCTACTTTGCCAACTCAGAGATCTTCAGGCAA...CAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CACATGGAACCTATTTATTTTCAAGTCAACAGTAGGGTTCCTCTCAATACCTCCAGCCAAAGAAGTTGCTaGAGCCGAGAGCGATCATCT +
Preference number: 4 (lower is better)
Translates to: HMEPIYFQVNSRVPLNTSSQRSC*SRERSS
Trigger: AGATGATCGCTCTCGGCTGCAGCAACTTCTTTGGCT...GGAGGTATTGAGAGGAACCCTACTGTTGACTTGAAAATAAATAGGTTCCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CACATGGAACCTATTTATTTTCAAGTCAACAGTAGGGTTCCTCTCAATACCTCCCTGGGCAAAGAGGACTaGGTCATGTATGCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: HMEPIYFQVNSRVPLNTSLGKED*VMYAGK
Trigger: TTTCCCAGCATACATGACGCAGTCCTCTTTGCCCAG...GGAGGTATTGAGAGGAACCCTACTGTTGACTTGAAAATAAATAGGTTCCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp ATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGTATCTATTACTAGGATaGCAGATGATTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: ISFSSEAGLGVNDYLGVKYLLLG*QMILPA
Trigger: AGCTGGCAGAATCATCTGGCATCCTAGTAATAGATA...CTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CACATGGAACCTATTTATTTTCAAGTCAACAGTAGGGTTCCTCTCAATACCTCCGCATTGTTGAAGACCTaGAATTTCGACTCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: HMEPIYFQVNSRVPLNTSALLKT*NFDSGA
Trigger: GGCCCCAGAGTCGAAATTCCAGGTCTTCAACAATGC...GGAGGTATTGAGAGGAACCCTACTGTTGACTTGAAAATAAATAGGTTCCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AAAAGTTTTGTGCAGAATAACTGGTATCTATTACTAGGATGCCAGATGATTCTGGCCTCTCAGCCTCCATaGCTGCTGTGTCCACATAGC +
Preference number: 4 (lower is better)
Translates to: KSFVQNNWYLLLGCQMILASQPP*LLCPHS
Trigger: GCTATGTGGACACAGCAGCCATGGAGGCTGAGAGGC...CAGAATCATCTGGCATCCTAGTAATAGATACCAGTTATTCTGCACAAAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GCAGGCCAGCACAGTTGTACTTGTCCTTCTGTTTTTGGCTCACTCGTAAAAGCTATGATTTTAATCCCCTaGATATCCTGGGCCCTATTA +
Preference number: 4 (lower is better)
Translates to: AGQHSCTCPSVFGSLVKAMILIP*ISWALL
Trigger: TAATAGGGCCCAGGATATCCAGGGGATTAAAATCAT...AGCTTTTACGAGTGAGCCAAAAACAGAAGGACAAGTACAACTGTGCTGGCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CCA 90 bp ATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCTTGTACACCTGGGCATaGATGTTCACCAAGAAGACC +
Preference number: 4 (lower is better)
Translates to: IFPASTRSRRVFFSKYSSLYTWA*MFTKKT
Trigger: GGTCTTCTTGGTGAACATCCATGCCCAGGTGTACAA...GCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TCAGGGGATCTAGATACTTGGTTCAAAGGGGACTCTGACTTGGAAATTCCTGAGCCATTGGCAGCCAGATaGCATAATGAATTCACAGAA +
Preference number: 4 (lower is better)
Translates to: SGDLDTWFKGDSDLEIPEPLAAR*HNEFTE
Trigger: TTCTGTGAATTCATTATGCCATCTGGCTGCCAATGG...CTCAGGAATTTCCAAGTCAGAGTCCCCTTTGAACCAAGTATCTAGATCCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp TCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCAAGAGTGAGTTGTCATTaGCTAAGGCTCTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SFLLQPGPEECSFPNIPARVSCH*LRLLSS
Trigger: GGAGGACAAGAGCCTTAGCCAATGACAACTCACTCT...TGCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp ATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGAAGGGGACTCTGACTTaGAAATTCCTGAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: IMNSQKSNAPGPRMCWLLKGTLT*KFLRLC
Trigger: ACAGAGCCTCAGGAATTTCCAAGTCAGAGTCCCCTT...CAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp CAGGTAAAGAAGGATAAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCGGGTTAATGATTACTTaGGGGTTAAGGATCACTTCA +
Preference number: 4 (lower is better)
Translates to: QVKKDKADLPKGGISLMGGLMIT*GLRITS
Trigger: TGAAGTGATCCTTAACCCCCAAGTAATCATTAACCC...GCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTTATCCTTCTTTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AAAAGTTTTGTGCAGAATAACTGGTATCTATTACTAGGATGCCAGATGATTCTGCCAGGACCAGCATGGTaGTCATCACCACCAGAGACA +
Preference number: 4 (lower is better)
Translates to: KSFVQNNWYLLLGCQMILPGPAW*SSPPET
Trigger: TGTCTCTGGTGGTGATGATCACCATGCTGGTCCTGG...CAGAATCATCTGGCATCCTAGTAATAGATACCAGTTATTCTGCACAAAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp CCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTCAGTCTTGGTTTTCATaGATAGAGACCTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: PDGIMNSQKSNAPGPRMCQSWFS*IETSSV
Trigger: AACAGAGGAGGTCTCTATTCATGAAAACCAAGACTG...ACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AAAAGTTTTGTGCAGAATAACTGGTATCTATTACTAGGATGCCAGATGATTCTGGAGACACACACAGGCTaGCCACCTGGGATTTTCCTC +
Preference number: 4 (lower is better)
Translates to: KSFVQNNWYLLLGCQMILETHTG*PPGIFL
Trigger: GAGGAAAATCCCAGGTGGCCAGCCTGTGTGTGTCTC...CAGAATCATCTGGCATCCTAGTAATAGATACCAGTTATTCTGCACAAAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp ATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGCAGTCTTGGTTTTCATaGATAGAGACCTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: IMNSQKSNAPGPRMCWLLQSWFS*IETSSV
Trigger: AACAGAGGAGGTCTCTATTCATGAAAACCAAGACTG...CAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp TCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCAAAGGGGTTGTTAAGCTaGAGAAGCTTGAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: SFLLQPGPEECSFPNIPAKGLLS*RSLRKA
Trigger: TGCTTTTCTCAAGCTTCTTCAGCTTAACAACCCCTT...TGCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AGAGATAAGGTTCCCAGTCCTCCCTGGGAATTATATTATCACAGGTCAGTATCAAAGGGGTTGTTAAGCTaGAGAAGCTTGAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: RDKVPSPPWELYYHRSVSKGLLS*RSLRKA
Trigger: TGCTTTTCTCAAGCTTCTTCAGCTTAACAACCCCTT...TGATACTGACCTGTGATAATATAATTCCCAGGGAGGACTGGGAACCTTATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp GCCTCCATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATGGGTTAATGATTACTTaGGGGTTAAGGATCACTTCA +
Preference number: 4 (lower is better)
Translates to: ASIFPASTRSRRVFFSKYGLMIT*GLRITS
Trigger: TGAAGTGATCCTTAACCCCCAAGTAATCATTAACCC...ATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGATGGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp AAAAGCATTGAAATTCTGGATTATTTCACTACTTTGCCTCCATCTTTCCTGCTTCATGACCTGGGCCAGTaGATAGCCATTTCGAAACTG +
Preference number: 4 (lower is better)
Translates to: KSIEILDYFTTLPPSFLLHDLGQ*IAISKL
Trigger: CAGTTTCGAAATGGCTATGCACTGGCCCAGGTCATG...AAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAATCCAGAATTTCAATGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp AAAAGCATTGAAATTCTGGATTATTTCACTACTTTGCCTCCATCTTTCCTGCTTTCTCTGCGTGAAACATaGTCCCGAACATCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KSIEILDYFTTLPPSFLLSLRET*SRTSPA
Trigger: AGCAGGAGATGTTCGGGAGCATGTTTCACGCAGAGA...AAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAATCCAGAATTTCAATGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp ATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCATGATTTTAATCCCCTaGATATCCTGGGCCCTATTA +
Preference number: 4 (lower is better)
Translates to: IFPASTRSRRVFFSKYSSMILIP*ISWALL
Trigger: TAATAGGGCCCAGGATATCCAGGGGATTAAAATCAT...GCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AAAAGCATTGAAATTCTGGATTATTTCACTACTTTGCCTCCATCTTTCCTGCTTCTTCATAGGAGAAGATaGCCTGAGGTCCTAAGGGTG +
Preference number: 4 (lower is better)
Translates to: KSIEILDYFTTLPPSFLLLHRRR*PEVLRV
Trigger: CACCCTTAGGACCTCAGGCCATCTTCTCCTATGAAG...AAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAATCCAGAATTTCAATGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CCA 90 bp AAAAGCATTGAAATTCTGGATTATTTCACTACTTTGCCTCCATCTTTCCTGCTTGTTCTGAGGCTGGTCTaGGGGTTAATGATTACTTGG +
Preference number: 4 (lower is better)
Translates to: KSIEILDYFTTLPPSFLLVLRLV*GLMITW
Trigger: CCAAGTAATCATTAACCCCCAGACCAGCCTCAGAAC...AAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAATCCAGAATTTCAATGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR TCA 90 bp AAAAGTTTTGTGCAGAATAACTGGTATCTATTACTAGGATGCCAGATGATTCTGCATTGGTGGCATTGTTaGAGACCTGGAATTTCGACT +
Preference number: 4 (lower is better)
Translates to: KSFVQNNWYLLLGCQMILHWWHC*RPGIST
Trigger: AGTCGAAATTCCAGGTCTTCAACAATGCCACCAATG...CAGAATCATCTGGCATCCTAGTAATAGATACCAGTTATTCTGCACAAAACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp AAAAGTTTTGTGCAGAATAACTGGTATCTATTACTAGGATGCCAGATGATTCTGTTGGCGATGACCTTTTaGCTGAAGATCTCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: KSFVQNNWYLLLGCQMILLAMTF*LKISEL
Trigger: CAACTCAGAGATCTTCAGGCAAAAGGTCATCGCCAA...CAGAATCATCTGGCATCCTAGTAATAGATACCAGTTATTCTGCACAAAACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR GCA 90 bp CACATGGAACCTATTTATTTTCAAGTCAACAGTAGGGTTCCTCTCAATACCTCCATTATTTCACTACTTTaGCTCCATCTTTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: HMEPIYFQVNSRVPLNTSIISLL*LHLSCF
Trigger: GAAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAAT...GGAGGTATTGAGAGGAACCCTACTGTTGACTTGAAAATAAATAGGTTCCATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TGTCCCCGGGGAGGTAGCTCTGGTGGTCTCGACGGTCCTGGCCACTGTCCAGGCAGCTTGGCCAGGGCCTaGATGCCCATCAAGTCCACG +
Preference number: 5 (lower is better)
Translates to: CPRGGSSGGLDGPGHCPGSLARA*MPIKST
Trigger: CGTGGACTTGATGGGCATCAAGGCCCTGGCCAAGCT...GCCTGGACAGTGGCCAGGACCGTCGAGACCACCAGAGCTACCTCCCCGGGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS CCA 90 bp GTAGCGGGGCCTGGGCTGGCTCATATCTGGGGCATTTACAAGCAGTaGGTGAGCAAAGCCGGCTGGGCAGGGCTGCAGGTGTGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: VAGPGLAHIWGIYKQ*VSKAGWAGLQVCLG
Trigger: CCCCAGACACACCTGCAGCCCTGCCCAGCCGGCTTTGCTCACCCACTGCTTGTAAATGCCCCAGATATGAGCCAGCCCAGGCCCCGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367134.2
ENST00000367135.8
CDS CCA 90 bp TGCGGCTCTGTCTACCACGTAGCGGGGCCTGGGCTGGCTCATATCTaGGGCATTTACAAGCAGTGGGTGAGCAAAGCCGGCTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: CGSVYHVAGPGLAHI*GIYKQWVSKAGWAG
Trigger: CCCTGCCCAGCCGGCTTTGCTCACCCACTGCTTGTAAATGCCCCAGATATGAGCCAGCCCAGGCCCCGCTACGTGGTAGACAGAGCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TGTCCCCGGGGAGGTAGCTCTGGTGGTCTCGACGGTCCTGGCCACTGTCCAGGCCTGGGAAAGACGTGCTaGCATTCTAGACTCCCATCC +
Preference number: 5 (lower is better)
Translates to: CPRGGSSGGLDGPGHCPGLGKTC*HSRLPS
Trigger: GGATGGGAGTCTAGAATGCAAGCACGTCTTTCCCAG...GCCTGGACAGTGGCCAGGACCGTCGAGACCACCAGAGCTACCTCCCCGGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS TCA 90 bp GAAGTCCCAAGTGCCAGGCACTCTGTAGGCAGCATGAGGACTGGCTaGGCCCTCACAGGGCGGTCAGGGTCTCTGCGTGAAACATGCTCC +
Preference number: 5 (lower is better)
Translates to: EVPSARHSVGSMRTG*ALTGRSGSLRETCS
Trigger: GGAGCATGTTTCACGCAGAGACCCTGACCGCCCTGTGAGGGCTCAGCCAGTCCTCATGCTGCCTACAGAGTGCCTGGCACTTGGGACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367135.8
ENST00000491127.5
CDS-3UTR CAA 90 bp CCCTCTTTGGGGTTTCTAGCCAGCCTCCAGGGGAAGGGAGCAGCCTCTGAGGGCGTAGGGGTCGGTGAGTaGCTTGAGGGAGTTCTTGAG +
Preference number: 5 (lower is better)
Translates to: PSLGFLASLQGKGAASEGVGVGE*LEGVLE
Trigger: CTCAAGAACTCCCTCAAGCAACTCACCGACCCCTAC...GCCCTCAGAGGCTGCTCCCTTCCCCTGGAGGCTGGCTAGAAACCCCAAAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCAGCTTGGCCAGGGCCTaGATGCCCATCAAGTCCACG +
Preference number: 5 (lower is better)
Translates to: STAGSATLRHVADLSLSLSLARA*MPIKST
Trigger: CGTGGACTTGATGGGCATCAAGGCCCTGGCCAAGCT...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS GCA 90 bp GGGATGGTCAGTCCGAAGATGTACTTGAGCACCGAAATCAGGATCTaGAGGCCGGCGGCCGTCATGAAGCCCCGGATGAAGGACTCGGAG +
Preference number: 5 (lower is better)
Translates to: GMVSPKMYLSTEIRI*RPAAVMKPRMKDSE
Trigger: CTCCGAGTCCTTCATCCGGGGCTTCATGACGGCCGCCGGCCTGCAGATCCTGATTTCGGTGCTCAAGTACATCTTCGGACTGACCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000469392.1
CDS GCA 90 bp GACACCCCCTGTGACCCCAGGCTCATCCTTTATGGAAGTCCCAAGTaGCAGGCACTCTGTAGGCAGCATGAGGACTGGCTGAGCCCTCAC +
Preference number: 5 (lower is better)
Translates to: DTPCDPRLILYGSPK*QALCRQHEDWLSPH
Trigger: GTGAGGGCTCAGCCAGTCCTCATGCTGCCTACAGAGTGCCTGGCACTTGGGACTTCCATAAAGGATGAGCCTGGGGTCACAGGGGGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367135.8
ENST00000491127.5
CDS GCA 90 bp CAGCCCACAGGGACCAGCCAGGCCCCCATGGTGTGCCGGGATCTTTaGCTAAGTTATCCCATCCAGTCTGAATCCTCAGCACCACCCCAT +
Preference number: 5 (lower is better)
Translates to: QPTGTSQAPMVCRDL*LSYPIQSESSAPPH
Trigger: ATGGGGTGGTGCTGAGGATTCAGACTGGATGGGATAACTTAGGCAAAGATCCCGGCACACCATGGGGGCCTGGCTGGTCCCTGTGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491127.5
CDS CCA 90 bp CCATCTGAGAGGAGGAAAAGGGTGGTTGGTGGCGGAAGACCAATGTaGTTCAGCAGTTCCAACGACCCGCCCCACACACACGCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: PSERRKRVVGGGRPM*FSSSNDPPHTHAGL
Trigger: CAGACCTGCGTGTGTGTGGGGCGGGTCGTTGGAACTGCTGAACCACATTGGTCTTCCGCCACCAACCACCCTTTTCCTCCTCTCAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469392.1
CDS-3UTR CAA 90 bp TGTCCCCGGGGAGGTAGCTCTGGTGGTCTCGACGGTCCTGGCCACTGTCCAGGCTCATTGGTGGCATTGTaGAAGACCTGGAATTTCGAC +
Preference number: 5 (lower is better)
Translates to: CPRGGSSGGLDGPGHCPGSLVAL*KTWNFD
Trigger: GTCGAAATTCCAGGTCTTCAACAATGCCACCAATGA...GCCTGGACAGTGGCCAGGACCGTCGAGACCACCAGAGCTACCTCCCCGGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCAACTCCAGGGGTCCATGCCTGTCTaGGCGATGACCTTTTGCCTG +
Preference number: 5 (lower is better)
Translates to: GLCNPQTCGRSLPEPQLQGSMPV*AMTFCL
Trigger: CAGGCAAAAGGTCATCGCCAAGACAGGCATGGACCC...CTGGAGTTGAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTTTAGCCGGGGTCTGGTaGTTGTTGGGGTCGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LQVTGSTISFSSEAGLGVLAGVW*LLGSVG
Trigger: CCCCACCGACCCCAACAACAACCAGACCCCGGCTAA...AACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCAACTCCAGTTGTCCTCCTGGAATTaGGCACTTCGGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GLCNPQTCGRSLPEPQLQLSSWN*ALRVLG
Trigger: GCCCAGCACCCGAAGTGCCAAATTCCAGGAGGACAA...CTGGAGTTGAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CAGGGCCTGACGGGTGAAGAGTGGGCTCACCAGACTCTCACTCCTGTAAGGGTATTGTCCTCCTGGAATTaGGCACTTCGGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: QGLTGEEWAHQTLTPVRVLSSWN*ALRVLG
Trigger: GCCCAGCACCCGAAGTGCCAAATTCCAGGAGGACAA...TACCCTTACAGGAGTGAGAGTCTGGTGAGCCCACTCTTCACCCGTCAGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CAA 90 bp CCCTCTTTGGGGTTTCTAGCCAGCCTCCAGGGGAAGGGAGCAGCCTCTGAGGGCGAGAGTGAGTTGTCATaGGCTAAGGCTCTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: PSLGFLASLQGKGAASEGESELS*AKALVL
Trigger: GAGGACAAGAGCCTTAGCCAATGACAACTCACTCTC...GCCCTCAGAGGCTGCTCCCTTCCCCTGGAGGCTGGCTAGAAACCCCAAAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS GCA 90 bp CCGGTCCTTCTTCTCAAACTCATCGTCGAAGAGGGTAAGGGAGTATaGGGCTCTGTCTACCACGTAGCGGGGCCTGGGCTGGCTCATATC +
Preference number: 5 (lower is better)
Translates to: PVLLLKLIVEEGKGV*GSVYHVAGPGLAHI
Trigger: GATATGAGCCAGCCCAGGCCCCGCTACGTGGTAGACAGAGCCGCATACTCCCTTACCCTCTTCGACGATGAGTTTGAGAAGAAGGACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TGGTCTCGACGGTCCTGGCCACTGTCCAGGCTAGAGTCTGATGTGCTTGCTGACAGCAAATGCCATGCCTaGTGGGACCTGGATGGATCC +
Preference number: 5 (lower is better)
Translates to: WSRRSWPLSRLESDVLADSKCHA*WDLDGS
Trigger: GGATCCATCCAGGTCCCACAAGGCATGGCATTTGCT...GTCAGCAAGCACATCAGACTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCGGTGGGGAACCCGCGTaGGATTTCTCCCACGATCTG +
Preference number: 5 (lower is better)
Translates to: NLTSTAGSATLRHVADLSGGEPA*DFSHDL
Trigger: CAGATCGTGGGAGAAATCCAACGCGGGTTCCCCACC...GGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CATAGGAGAAGATGGCCTGAGGTCCTAAGGGTGTTAAAGAGTCTTCCTGTGCAGCAGGAGGCTTGTCCATaGCGGCCAGGGCCTGACGGG +
Preference number: 5 (lower is better)
Translates to: HRRRWPEVLRVLKSLPVQQEACP*RPGPDG
Trigger: CCCGTCAGGCCCTGGCCGCAATGGACAAGCCTCCTG...CTGCACAGGAAGACTCTTTAACACCCTTAGGACCTCAGGCCATCTTCTCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CGAGCCGTGTGGGCTCTGGGACACTTTTTGAAGCTTGTACAGCAGGCCAGCACATACCCATCCCCCTCTTaGGGGTTTCTAGCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: RAVWALGHFLKLVQQASTYPSPS*GFLASL
Trigger: GAGGCTGGCTAGAAACCCCAAAGAGGGGGATGGGTA...TGTGCTGGCCTGCTGTACAAGCTTCAAAAAGTGTCCCAGAGCCCACACGGCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CAA 90 bp AAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCCTGGGGTCAAGGGGATGAGCGAGGCGATGTaGGTGTGGGGGAGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: KADLPKGGISLMGPGVKGMSEAM*VWGRFL
Trigger: CAAAAACCTCCCCCACACCAACATCGCCTCGCTCAT...CCCCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CTCTCCCTGAGCCTCAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGGGTGGGGAACCCGCGTaGGATTTCTCCCACGATCTG +
Preference number: 5 (lower is better)
Translates to: LSLSLNSRSLGQQSPSVLGGEPA*DFSHDL
Trigger: CAGATCGTGGGAGAAATCCAACGCGGGTTCCCCACC...CAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTGAGGCTCAGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGGGTTTCTAGCCGGGTCCATGCCTGTCTaGGCGATGACCTTTTGCCTG +
Preference number: 5 (lower is better)
Translates to: RMPDDSASYPSPSLGFLAGSMPV*AMTFCL
Trigger: CAGGCAAAAGGTCATCGCCAAGACAGGCATGGACCC...GGCTAGAAACCCCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGGCCAGCACCCCCTTACCCATCCCCCTCTTaGGGGTTTCTAGCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: RKAMLLGQECVGSWPAPPYPSPS*GFLASL
Trigger: GAGGCTGGCTAGAAACCCCAAAGAGGGGGATGGGTA...AGGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCGAGAGTGAGTTGTCATaGGCTAAGGCTCTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: STAGSATLRHVADLSLSLESELS*AKALVL
Trigger: GAGGACAAGAGCCTTAGCCAATGACAACTCACTCTC...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CCGACACCCCCTGTGACCCCAGGCTCATCCTTTATGGAAGTCCCAAGTGCCAGGGTAGGGGAGAGTGAGTaGTCATTGGCTAAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: PTPPVTPGSSFMEVPSARVGESE*SLAKAL
Trigger: AAGAGCCTTAGCCAATGACAACTCACTCTCCCCTAC...CCTGGCACTTGGGACTTCCATAAAGGATGAGCCTGGGGTCACAGGGGGTGTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS GCA 90 bp TGGAGCCCCTTGGAAGTTGTGTCCTGGGGTCACGTCTCTAGCATTTaGCTGGGCAAAGAGGACTGCGTCATGTATGCTGGGAAAGACGTG +
Preference number: 5 (lower is better)
Translates to: WSPLEVVSWGHVSSI*LGKEDCVMYAGKDV
Trigger: CACGTCTTTCCCAGCATACATGACGCAGTCCTCTTTGCCCAGGCAAATGCTAGAGACGTGACCCCAGGACACAACTTCCAAGGGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS CCA 90 bp GCCCCTTGGAAGTTGTGTCCTGGGGTCACGTCTCTAGCATTTGCCTaGGCAAAGAGGACTGCGTCATGTATGCTGGGAAAGACGTGCTTG +
Preference number: 5 (lower is better)
Translates to: APWKLCPGVTSLAFA*AKRTASCMLGKTCL
Trigger: CAAGCACGTCTTTCCCAGCATACATGACGCAGTCCTCTTTGCCCAGGCAAATGCTAGAGACGTGACCCCAGGACACAACTTCCAAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS CCA 90 bp GCCAAACTGCATGAAGCCCAGACCCATCTGAGAGGAGGAAAAGGGTaGTTGGTGGCGGAAGACCAATGTGGTTCAGCAGTTCCAACGACC +
Preference number: 5 (lower is better)
Translates to: AKLHEAQTHLRGGKG*LVAEDQCGSAVPTT
Trigger: GGTCGTTGGAACTGCTGAACCACATTGGTCTTCCGCCACCAACCACCCTTTTCCTCCTCTCAGATGGGTCTGGGCTTCATGCAGTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469392.1
CDS-3UTR CAA 90 bp TCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCAGTCCGAAGATGTACTaGAGCACCGAAATCAGGATC +
Preference number: 5 (lower is better)
Translates to: STAGSATLRHVADLSLSLSPKMY*STEIRI
Trigger: GATCCTGATTTCGGTGCTCAAGTACATCTTCGGACT...GAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AATGTCTTCCCTCTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGGGTGGGGAACCCGCGTaGGATTTCTCCCACGATCTG +
Preference number: 5 (lower is better)
Translates to: NVFPLPHVFPILPPQRALGGEPA*DFSHDL
Trigger: CAGATCGTGGGAGAAATCCAACGCGGGTTCCCCACC...CAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAGAGGGAAGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCAAGGAGCCAAAGAAGTaGCTGCAGCCGAGAGCGATC +
Preference number: 5 (lower is better)
Translates to: FGTSGAGHGESQITLSFAKEPKK*LQPRAI
Trigger: GATCGCTCTCGGCTGCAGCAACTTCTTTGGCTCCTT...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCAAGGAGCCAAAGAAGTaGCTGCAGCCGAGAGCGATC +
Preference number: 5 (lower is better)
Translates to: QSYLHSGLCNPQTCGRSLKEPKK*LQPRAI
Trigger: GATCGCTCTCGGCTGCAGCAACTTCTTTGGCTCCTT...GAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GGATGTAGCGGATCCCTGGAGGACTTCCACCTTTGCCTACAGAAGGACCCCATTGTAGGGGTCGGTGAGTaGCTTGAGGGAGTTCTTGAG +
Preference number: 5 (lower is better)
Translates to: GCSGSLEDFHLCLQKDPIVGVGE*LEGVLE
Trigger: CTCAAGAACTCCCTCAAGCAACTCACCGACCCCTAC...AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTATTAGCCGGGGTCTGGTaGTTGTTGGGGTCGGTGGGG +
Preference number: 5 (lower is better)
Translates to: KTQSGSAPFHICMQLGDVLAGVW*LLGSVG
Trigger: CCCCACCGACCCCAACAACAACCAGACCCCGGCTAA...TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GTACTAGCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAATGGGCCAAGAATGTGTaGGCTCTTGGCCAGCACCCC +
Preference number: 5 (lower is better)
Translates to: VLAPSSPLSLWVQRGIPKWAKNV*ALGQHP
Trigger: GGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCA...TTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGCTAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TGGTCTCGACGGTCCTGGCCACTGTCCAGGCTAGAGTCTGATGTGCTTGCTGACTTCGCCTTCCAAGTTTaGAGTTCCATTGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: WSRRSWPLSRLESDVLADFAFQV*SSIGSQ
Trigger: CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAA...GTCAGCAAGCACATCAGACTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TGGTCTCGACGGTCCTGGCCACTGTCCAGGCTAGAGTCTGATGTGCTTGCTGACAGTCCGAAGATGTACTaGAGCACCGAAATCAGGATC +
Preference number: 5 (lower is better)
Translates to: WSRRSWPLSRLESDVLADSPKMY*STEIRI
Trigger: GATCCTGATTTCGGTGCTCAAGTACATCTTCGGACT...GTCAGCAAGCACATCAGACTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TTCCCTGTGTTGGTACTAGCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAAAGGAGCCAAAGAAGTaGCTGCAGCCGAGAGCGATC +
Preference number: 5 (lower is better)
Translates to: FPVLVLAPSSPLSLWVQRKEPKK*LQPRAI
Trigger: GATCGCTCTCGGCTGCAGCAACTTCTTTGGCTCCTT...TCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGCTAGTACCAACACAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACAGGGAGTTCTTGAGATaGACAGCGATCAGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: LPHVFPILPPQRALQPSDREFLR*TAIRAP
Trigger: AGGAGCCCTGATCGCTGTCAATCTCAAGAACTCCCT...GTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAAGCTTGGCCAGGGCCTaGATGCCCATCAAGTCCACG +
Preference number: 5 (lower is better)
Translates to: KTQSGSAPFHICMQLGDVSLARA*MPIKST
Trigger: CGTGGACTTGATGGGCATCAAGGCCCTGGCCAAGCT...TACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGCTCTGGGACACTTTTaGAAGCTTGTACAGCAGGCC +
Preference number: 5 (lower is better)
Translates to: QLQVTGSTISFSSEAGLGALGHF*KLVQQA
Trigger: GGCCTGCTGTACAAGCTTCAAAAAGTGTCCCAGAGC...CCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CTGGTATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTGGGCCAAGAATGTGTaGGCTCTTGGCCAGCACCCC +
Preference number: 5 (lower is better)
Translates to: LVSITRMPDDSASYPSPSWAKNV*ALGQHP
Trigger: GGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCA...AGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAGCGGATCCCTGGAGGACTGAGAGTGAGTTGTCATaGGCTAAGGCTCTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: APFHICMQLGDVADPWRTESELS*AKALVL
Trigger: GAGGACAAGAGCCTTAGCCAATGACAACTCACTCTC...AGTCCTCCAGGGATCCGCTACATCCCCTAACTGCATGCAGATGTGGAAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CGAGCCGTGTGGGCTCTGGGACACTTTTTGAAGCTTGTACAGCAGGCCAGCACAAAAGGGGACTCTGACTaGGAAATTCCTGAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: RAVWALGHFLKLVQQASTKGDSD*EIPEAL
Trigger: CAGAGCCTCAGGAATTTCCAAGTCAGAGTCCCCTTT...TGTGCTGGCCTGCTGTACAAGCTTCAAAAAGTGTCCCAGAGCCCACACGGCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367135.8
CDS-3UTR CAA 90 bp GAAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTAGCAAATGCCATGCCTaGTGGGACCTGGATGGATCC +
Preference number: 5 (lower is better)
Translates to: EDPIWISPFPHLHAVRGCSKCHA*WDLDGS
Trigger: GGATCCATCCAGGTCCCACAAGGCATGGCATTTGCT...ACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCCTGGGGTCAAGGGGAGTCCGAAGATGTACTaGAGCACCGAAATCAGGATC +
Preference number: 5 (lower is better)
Translates to: KADLPKGGISLMGPGVKGSPKMY*STEIRI
Trigger: GATCCTGATTTCGGTGCTCAAGTACATCTTCGGACT...CCCCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCCTGGGGTCAAGGGGCGCTTCTCCTGCTTCTaGAGGTATTTTTGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: KADLPKGGISLMGPGVKGRFSCF*RYFCLA
Trigger: AGCCAAGCAAAAATACCTCAAGAAGCAGGAGAAGCG...CCCCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCCCATGGCTAATGTCATaGTACACCTGGGCATGGATG +
Preference number: 5 (lower is better)
Translates to: FGTSGAGHGESQITLSFAPWLMS*YTWAWM
Trigger: CATCCATGCCCAGGTGTACAATGACATTAGCCATGG...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCACAGGAGGCTTGTCCATaGCGGCCAGGGCCTGACGGG +
Preference number: 5 (lower is better)
Translates to: SFLLQPGPEECSFPNIPAQEACP*RPGPDG
Trigger: CCCGTCAGGCCCTGGCCGCAATGGACAAGCCTCCTG...TGCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CTCTCCCTGAGCCTCAACTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGGCTCTGGGACACTTTTaGAAGCTTGTACAGCAGGCC +
Preference number: 5 (lower is better)
Translates to: LSLSLNSRSLGQQSPSVLALGHF*KLVQQA
Trigger: GGCCTGCTGTACAAGCTTCAAAAAGTGTCCCAGAGC...CAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAGTTGAGGCTCAGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACAGCTCTGGGACACTTTTaGAAGCTTGTACAGCAGGCC +
Preference number: 5 (lower is better)
Translates to: CLMCFQSYLHSGLCNPQTALGHF*KLVQQA
Trigger: GGCCTGCTGTACAAGCTTCAAAAAGTGTCCCAGAGC...TGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTTTCGCCTTCCAAGTTTaGAGTTCCATTGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: LQVTGSTISFSSEAGLGVFAFQV*SSIGSQ
Trigger: CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAA...AACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCAAAGGGGACTCTGACTaGGAAATTCCTGAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: FGTSGAGHGESQITLSFAKGDSD*EIPEAL
Trigger: CAGAGCCTCAGGAATTTCCAAGTCAGAGTCCCCTTT...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS GCA 90 bp TTTGCCTGGGCAAAGAGGACTGCGTCATGTATGCTGGGAAAGACGTaGTTGCATTCTAGACTCCCATCCTCAAAGACGCCTCCATGGCTA +
Preference number: 5 (lower is better)
Translates to: FAWAKRTASCMLGKT*LHSRLPSSKTPPWL
Trigger: TAGCCATGGAGGCGTCTTTGAGGATGGGAGTCTAGAATGCAAGCACGTCTTTCCCAGCATACATGACGCAGTCCTCTTTGCCCAGGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS GCA 90 bp TGTGGTAGGGCCTCGTTTGTTAACTCCCAGATTCTGAACCCTGTATaGTCACGAGTCCACAGACCCCTAGACCTTTGGTGCTATGTGGTC +
Preference number: 5 (lower is better)
Translates to: CGRASFVNSQILNPV*SRVHRPLDLWCYVV
Trigger: GACCACATAGCACCAAAGGTCTAGGGGTCTGTGGACTCGTGAGCATACAGGGTTCAGAATCTGGGAGTTAACAAACGAGGCCCTACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491127.5
CDS-3UTR CAA 90 bp AGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGGGTTTCTAGCCGAACATCTGAAGGCATaGCGAAGTTTCTCTCCCACT +
Preference number: 5 (lower is better)
Translates to: RMPDDSASYPSPSLGFLAEHLKA*RSFSPT
Trigger: AGTGGGAGAGAAACTTCGCAATGCCTTCAGATGTTC...GGCTAGAAACCCCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTCCAAACACCACAGCTTaGATCTTGGCTGAGGAACAT +
Preference number: 5 (lower is better)
Translates to: LQVTGSTISFSSEAGLGVPNTTA*ILAEEH
Trigger: ATGTTCCTCAGCCAAGATCAAAGCTGTGGTGTTTGG...AACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GGATGTAGCGGATCCCTGGAGGACTTCCACCTTTGCCTACAGAAGGACCCCATTTCTTTAATCTTGTACTaGGGGAGCCAGGAGAGCACA +
Preference number: 5 (lower is better)
Translates to: GCSGSLEDFHLCLQKDPISLILY*GSQEST
Trigger: TGTGCTCTCCTGGCTCCCCAAGTACAAGATTAAAGA...AATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCCAGGGATCCGCTACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AATGTCTTCCCTCTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGAGGGAGTTCTTGAGATaGACAGCGATCAGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: NVFPLPHVFPILPPQRALREFLR*TAIRAP
Trigger: AGGAGCCCTGATCGCTGTCAATCTCAAGAACTCCCT...CAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAGAGGGAAGACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCCCTGGGGTCAAGGGGTGCAGGGAGACAGTCTaGGTTTTCATGAATAGAGAC +
Preference number: 5 (lower is better)
Translates to: KADLPKGGISLMGPGVKGCRETV*VFMNRD
Trigger: GTCTCTATTCATGAAAACCAAGACTGTCTCCCTGCA...CCCCTTGACCCCAGGGCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTTAGCCGGGGTCTGGTaGTTGTTGGGGTCGGTGGGG +
Preference number: 5 (lower is better)
Translates to: PDGIMNSQKSNAPGPRMCLAGVW*LLGSVG
Trigger: CCCCACCGACCCCAACAACAACCAGACCCCGGCTAA...ACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAATTTGGCACTTCGGGTGCTCTGGGAAAGACGTGCTaGCATTCTAGACTCCCATCC +
Preference number: 5 (lower is better)
Translates to: ELSLAKALVLLEFGTSGALGKTC*HSRLPS
Trigger: GGATGGGAGTCTAGAATGCAAGCACGTCTTTCCCAG...AGCACCCGAAGTGCCAAATTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCCCAGCACAGTTGTACTaGTCCTTCTGTTTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: FGTSGAGHGESQITLSFAPAQLY*SFCFWL
Trigger: GAGCCAAAAACAGAAGGACAAGTACAACTGTGCTGG...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TTTGGCACTTCGGGTGCTGGGCACGGTGAATCCCAGATAACATTGTCCTTCGCCAGCAGGCCAGCACAGTaGTACTTGTCCTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: FGTSGAGHGESQITLSFASRPAQ*YLSFCF
Trigger: AAAACAGAAGGACAAGTACAACTGTGCTGGCCTGCT...GGCGAAGGACAATGTTATCTGGGATTCACCGTGCCCAGCACCCGAAGTGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GCCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTGGGCCAAGAATGTGTaGGCTCTTGGCCAGCACCCC +
Preference number: 5 (lower is better)
Translates to: ARWHNEFTEKQCSWAKNVWAKNV*ALGQHP
Trigger: GGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCA...CACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCACATTGGCTAAGGCTCTaGTCCTCCTGGAATTTGGCA +
Preference number: 5 (lower is better)
Translates to: CVSNLTSTAGSATLRHVAHWLRL*SSWNLA
Trigger: TGCCAAATTCCAGGAGGACAAGAGCCTTAGCCAATG...TGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGTAGGGGAGAGTGAGTaGTCATTGGCTAAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: CVSNLTSTAGSATLRHVAVGESE*SLAKAL
Trigger: AAGAGCCTTAGCCAATGACAACTCACTCTCCCCTAC...TGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS GCA 90 bp TTGGTGGCATTGTTGAAGACCTGGAATTTCGACTCTGGGGCCAGCTaGAGACAGATGTTACCCACCAGGATGCTGATAACGGCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: LVALLKTWNFDSGAS*RQMLPTRMLITAKV
Trigger: TACCTTTGCCGTTATCAGCATCCTGGTGGGTAACATCTGTCTGCAGCTGGCCCCAGAGTCGAAATTCCAGGTCTTCAACAATGCCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS GCA 90 bp TGTGTGGGCCTCATTCTCCGCTTCTCCTGCTTCTTGAGGTATTTTTaGTTGGCTAGTAATACTTTCTGGGGGTCCATGCCTGTCTTGGCG +
Preference number: 5 (lower is better)
Translates to: CVGLILRFSCFLRYF*LASNTFWGSMPVLA
Trigger: CGCCAAGACAGGCATGGACCCCCAGAAAGTATTACTAGCCAAGCAAAAATACCTCAAGAAGCAGGAGAAGCGGAGAATGAGGCCCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS-3UTR CAA 90 bp AGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGGGTTTCTAGCCGTGTGGGGGAGGTTTTaGCAAATGTCAATGAAGGTA +
Preference number: 5 (lower is better)
Translates to: RMPDDSASYPSPSLGFLAVWGRF*QMSMKV
Trigger: TACCTTCATTGACATTTGCAAAAACCTCCCCCACAC...GGCTAGAAACCCCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CTCCAGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTGTGTGGGGGAGGTTTTaGCAAATGTCAATGAAGGTA +
Preference number: 5 (lower is better)
Translates to: LQVTGSTISFSSEAGLGVVWGRF*QMSMKV
Trigger: TACCTTCATTGACATTTGCAAAAACCTCCCCCACAC...AACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp ATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGATGAGCGAGGCGATGTaGGTGTGGGGGAGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: ISFSSEAGLGVNDYLGVKMSEAM*VWGRFL
Trigger: CAAAAACCTCCCCCACACCAACATCGCCTCGCTCAT...CTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CAGGTAAAGAAGGATAAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCATGAGCGAGGCGATGTaGGTGTGGGGGAGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: QVKKDKADLPKGGISLMGMSEAM*VWGRFL
Trigger: CAAAAACCTCCCCCACACCAACATCGCCTCGCTCAT...GCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTTATCCTTCTTTACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AATGTCTTCCCTCTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGTGCTTGAGGGAGTTCTaGAGATTGACAGCGATCAGG +
Preference number: 5 (lower is better)
Translates to: NVFPLPHVFPILPPQRALCLREF*RLTAIR
Trigger: CCTGATCGCTGTCAATCTCAAGAACTCCCTCAAGCA...CAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAGAGGGAAGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGGTAGGGGTCGGTGAGTaGCTTGAGGGAGTTCTTGAG +
Preference number: 5 (lower is better)
Translates to: YLLLGCQMILPATHPPLWVGVGE*LEGVLE
Trigger: CTCAAGAACTCCCTCAAGCAACTCACCGACCCCTAC...CCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GGTGGAGTAGGGGAGAGTGAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAACGCTTCTCCTGCTTCTaGAGGTATTTTTGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: GGVGESELSLAKALVLLERFSCF*RYFCLA
Trigger: AGCCAAGCAAAAATACCTCAAGAAGCAGGAGAAGCG...TTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTCACTCTCCCCTACTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGGCCAGCACCCCCTTGCAGGGAGACAGTCTaGGTTTTCATGAATAGAGAC +
Preference number: 5 (lower is better)
Translates to: RKAMLLGQECVGSWPAPPCRETV*VFMNRD
Trigger: GTCTCTATTCATGAAAACCAAGACTGTCTCCCTGCA...AGGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GAGTTGTCATTGGCTAAGGCTCTTGTCCTCCTGGAATTTGGCACTTCGGGTGCTCCATGGCTAATGTCATaGTACACCTGGGCATGGATG +
Preference number: 5 (lower is better)
Translates to: ELSLAKALVLLEFGTSGAPWLMS*YTWAWM
Trigger: CATCCATGCCCAGGTGTACAATGACATTAGCCATGG...AGCACCCGAAGTGCCAAATTCCAGGAGGACAAGAGCCTTAGCCAATGACAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GCCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGGACAGCAGTGGTGGTTaGGGCAGCCTTGGGGATGAT +
Preference number: 5 (lower is better)
Translates to: ARWHNEFTEKQCSWAKNVDSSGG*GSLGDD
Trigger: ATCATCCCCAAGGCTGCCCAAACCACCACTGCTGTC...CACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GCCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTACCCATCCCCCTCTTaGGGGTTTCTAGCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: ARWHNEFTEKQCSWAKNVYPSPS*GFLASL
Trigger: GAGGCTGGCTAGAAACCCCAAAGAGGGGGATGGGTA...CACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CATAGGAGAAGATGGCCTGAGGTCCTAAGGGTGTTAAAGAGTCTTCCTGTGCAGTCCGTTTTCCCTGTGTaGGTACTAGCACCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: HRRRWPEVLRVLKSLPVQSVFPV*VLAPSS
Trigger: GGAAGAGGGTGCTAGTACCAACACAGGGAAAACGGA...CTGCACAGGAAGACTCTTTAACACCCTTAGGACCTCAGGCCATCTTCTCCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CAGGTAAAGAAGGATAAGGCAGATTTACCAAAGGGAGGCATTTCCCTGATGGGCAGAATGTGTTGGCTCTaGGCCAGCACCCCCTCCTTT +
Preference number: 5 (lower is better)
Translates to: QVKKDKADLPKGGISLMGRMCWL*ASTPSF
Trigger: AAAGGAGGGGGTGCTGGCCAAGAGCCAACACATTCT...GCCCATCAGGGAAATGCCTCCCTTTGGTAAATCTGCCTTATCCTTCTTTACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGGCCAGCACCCCCTGAATCCCAGATAACATaGTCCTTCGCCTTCCAAGTT +
Preference number: 5 (lower is better)
Translates to: RKAMLLGQECVGSWPAPPESQIT*SFAFQV
Trigger: AACTTGGAAGGCGAAGGACAATGTTATCTGGGATTC...AGGGGGTGCTGGCCAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GAAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTCATTGGCTAAGGCTCTaGTCCTCCTGGAATTTGGCA +
Preference number: 5 (lower is better)
Translates to: EDPIWISPFPHLHAVRGCHWLRL*SSWNLA
Trigger: TGCCAAATTCCAGGAGGACAAGAGCCTTAGCCAATG...ACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGCATTGGCTAAGGCTCTaGTCCTCCTGGAATTTGGCA +
Preference number: 5 (lower is better)
Translates to: RSLGQQSPSVLRLVWGLMHWLRL*SSWNLA
Trigger: TGCCAAATTCCAGGAGGACAAGAGCCTTAGCCAATG...CATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGGGTTTCTAGCCGGGGTTAATGATTACTaGGGGGTTAAGGATCACTTC +
Preference number: 5 (lower is better)
Translates to: RMPDDSASYPSPSLGFLAGVNDY*GVKDHF
Trigger: GAAGTGATCCTTAACCCCCAAGTAATCATTAACCCC...GGCTAGAAACCCCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS TCA 90 bp GCTCCATCCACAGCCAGAGTGACAGAAAGCGCACAGCAAATGACATaGATTTTAAAGAAGGAGCCAAAGAAGTTGCTGCAGCCGAGAGCG +
Preference number: 5 (lower is better)
Translates to: APSTARVTESAQQMT*ILKKEPKKLLQPRA
Trigger: CGCTCTCGGCTGCAGCAACTTCTTTGGCTCCTTCTTTAAAATTCATGTCATTTGCTGTGCGCTTTCTGTCACTCTGGCTGTGGATGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000469392.1
ENST00000491127.5
CDS CCA 90 bp ATAGCTCTCATTGGTGGCATTGTTGAAGACCTGGAATTTCGACTCTaGGGCCAGCTGCAGACAGATGTTACCCACCAGGATGCTGATAAC +
Preference number: 5 (lower is better)
Translates to: IALIGGIVEDLEFRL*GQLQTDVTHQDADN
Trigger: GTTATCAGCATCCTGGTGGGTAACATCTGTCTGCAGCTGGCCCCAGAGTCGAAATTCCAGGTCTTCAACAATGCCACCAATGAGAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GTACTAGCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAAGAACATCTGAAGGCATaGCGAAGTTTCTCTCCCACT +
Preference number: 5 (lower is better)
Translates to: VLAPSSPLSLWVQRGIPKEHLKA*RSFSPT
Trigger: AGTGGGAGAGAAACTTCGCAATGCCTTCAGATGTTC...TTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGCTAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGTCTTTAATCTTGTACTaGGGGAGCCAGGAGAGCACA +
Preference number: 5 (lower is better)
Translates to: RSLGQQSPSVLRLVWGLMSLILY*GSQEST
Trigger: TGTGCTCTCCTGGCTCCCCAAGTACAAGATTAAAGA...CATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGGATCACTTCATCAAGAGGGAGTTCTTGAGATaGACAGCGATCAGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: EAGLGVNDYLGVKDHFIKREFLR*TAIRAP
Trigger: AGGAGCCCTGATCGCTGTCAATCTCAAGAACTCCCT...CTTGATGAAGTGATCCTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp ATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGGGGTCGGTGAGTTGCTaGAGGGAGTTCTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: ISFSSEAGLGVNDYLGVKGSVSC*REFLRL
Trigger: CAATCTCAAGAACTCCCTCAAGCAACTCACCGACCC...CTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GCCTCCATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATGGGTCCATGCCTGTCTaGGCGATGACCTTTTGCCTG +
Preference number: 5 (lower is better)
Translates to: ASIFPASTRSRRVFFSKYGSMPV*AMTFCL
Trigger: CAGGCAAAAGGTCATCGCCAAGACAGGCATGGACCC...ATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGATGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TCCCAGATAACATTGTCCTTCGCCTTCCAAGTTTTGAGTTCCATTGGCAGCCAGCTGGGAAAGACGTGCTaGCATTCTAGACTCCCATCC +
Preference number: 5 (lower is better)
Translates to: SQITLSFAFQVLSSIGSQLGKTC*HSRLPS
Trigger: GGATGGGAGTCTAGAATGCAAGCACGTCTTTCCCAG...CTGGCTGCCAATGGAACTCAAAACTTGGAAGGCGAAGGACAATGTTATCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GCCTCCATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATGACAGCAGTGGTGGTTaGGGCAGCCTTGGGGATGAT +
Preference number: 5 (lower is better)
Translates to: ASIFPASTRSRRVFFSKYDSSGG*GSLGDD
Trigger: ATCATCCCCAAGGCTGCCCAAACCACCACTGCTGTC...ATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGATGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GGGCTCTGCAACCCTCAGACATGTGGCAGATCTCTCCCTGAGCCTCAACTCCAGGAATTCCCAAAAGTTTaGTGCAGAATAACTGGTATC +
Preference number: 5 (lower is better)
Translates to: GLCNPQTCGRSLPEPQLQEFPKV*CRITGI
Trigger: GATACCAGTTATTCTGCACAAAACTTTTGGGAATTC...CTGGAGTTGAGGCTCAGGGAGAGATCTGCCACATGTCTGAGGGTTGCAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TGGTCTCGACGGTCCTGGCCACTGTCCAGGCTAGAGTCTGATGTGCTTGCTGACGAATTCCCAAAAGTTTaGTGCAGAATAACTGGTATC +
Preference number: 5 (lower is better)
Translates to: WSRRSWPLSRLESDVLADEFPKV*CRITGI
Trigger: GATACCAGTTATTCTGCACAAAACTTTTGGGAATTC...GTCAGCAAGCACATCAGACTCTAGCCTGGACAGTGGCCAGGACCGTCGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TCAGGGGATCTAGATACTTGGTTCAAAGGGGACTCTGACTTGGAAATTCCTGAGAGAATGTGTTGGCTCTaGGCCAGCACCCCCTCCTTT +
Preference number: 5 (lower is better)
Translates to: SGDLDTWFKGDSDLEIPERMCWL*ASTPSF
Trigger: AAAGGAGGGGGTGCTGGCCAAGAGCCAACACATTCT...CTCAGGAATTTCCAAGTCAGAGTCCCCTTTGAACCAAGTATCTAGATCCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCAACCCTCAGACATGTGGCAGAATCCCAGATAACATaGTCCTTCGCCTTCCAAGTT +
Preference number: 5 (lower is better)
Translates to: CVSNLTSTAGSATLRHVAESQIT*SFAFQV
Trigger: AACTTGGAAGGCGAAGGACAATGTTATCTGGGATTC...TGCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS CCA 90 bp AAGACGTGCTTGCATTCTAGACTCCCATCCTCAAAGACGCCTCCATaGCTAATGTCATTGTACACCTGGGCATGGATGTTCACCAAGAAG +
Preference number: 5 (lower is better)
Translates to: KTCLHSRLPSSKTPP*LMSLYTWAWMFTKK
Trigger: CTTCTTGGTGAACATCCATGCCCAGGTGTACAATGACATTAGCCATGGAGGCGTCTTTGAGGATGGGAGTCTAGAATGCAAGCACGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS-3UTR CAA 90 bp GTTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACAGAACATCTGAAGGCATaGCGAAGTTTCTCTCCCACT +
Preference number: 5 (lower is better)
Translates to: VKESSCAGRPNLDQPLSTEHLKA*RSFSPT
Trigger: AGTGGGAGAGAAACTTCGCAATGCCTTCAGATGTTC...TGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AATGTCTTCCCTCTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGCTCTCATTGGTGGCATaGTTGAAGACCTGGAATTTC +
Preference number: 5 (lower is better)
Translates to: NVFPLPHVFPILPPQRALLSLVA*LKTWNF
Trigger: GAAATTCCAGGTCTTCAACAATGCCACCAATGAGAG...CAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAGAGGGAAGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGGTGTGGGGGAGGTTTTaGCAAATGTCAATGAAGGTA +
Preference number: 5 (lower is better)
Translates to: RSLGQQSPSVLRLVWGLMVWGRF*QMSMKV
Trigger: TACCTTCATTGACATTTGCAAAAACCTCCCCCACAC...CATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TATCTATTACTAGGATGCCAGATGATTCTGCCAGCTACCCATCCCCCTCTTTGGTGCTTGAGGGAGTTCTaGAGATTGACAGCGATCAGG +
Preference number: 5 (lower is better)
Translates to: YLLLGCQMILPATHPPLWCLREF*RLTAIR
Trigger: CCTGATCGCTGTCAATCTCAAGAACTCCCTCAAGCA...CCAAAGAGGGGGATGGGTAGCTGGCAGAATCATCTGGCATCCTAGTAATAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TCAGGGGATCTAGATACTTGGTTCAAAGGGGACTCTGACTTGGAAATTCCTGAGGGGTCGGTGAGTTGCTaGAGGGAGTTCTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: SGDLDTWFKGDSDLEIPEGSVSC*REFLRL
Trigger: CAATCTCAAGAACTCCCTCAAGCAACTCACCGACCC...CTCAGGAATTTCCAAGTCAGAGTCCCCTTTGAACCAAGTATCTAGATCCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp ATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGCCATGGCTAATGTCATaGTACACCTGGGCATGGATG +
Preference number: 5 (lower is better)
Translates to: ISFSSEAGLGVNDYLGVKPWLMS*YTWAWM
Trigger: CATCCATGCCCAGGTGTACAATGACATTAGCCATGG...CTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CATAGGAGAAGATGGCCTGAGGTCCTAAGGGTGTTAAAGAGTCTTCCTGTGCAGAGCAGGCCAGCACAGTaGTACTTGTCCTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: HRRRWPEVLRVLKSLPVQSRPAQ*YLSFCF
Trigger: AAAACAGAAGGACAAGTACAACTGTGCTGGCCTGCT...CTGCACAGGAAGACTCTTTAACACCCTTAGGACCTCAGGCCATCTTCTCCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AGGTCACTGGGTCAACAATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGGAATCCCAGATAACATaGTCCTTCGCCTTCCAAGTT +
Preference number: 5 (lower is better)
Translates to: RSLGQQSPSVLRLVWGLMESQIT*SFAFQV
Trigger: AACTTGGAAGGCGAAGGACAATGTTATCTGGGATTC...CATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGATTGTTGACCCAGTGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GAAGACCCAATCTGGATCAGCCCCTTTCCACATCTGCATGCAGTTAGGGGATGTGGGGTTAATGATTACTaGGGGGTTAAGGATCACTTC +
Preference number: 5 (lower is better)
Translates to: EDPIWISPFPHLHAVRGCGVNDY*GVKDHF
Trigger: GAAGTGATCCTTAACCCCCAAGTAATCATTAACCCC...ACATCCCCTAACTGCATGCAGATGTGGAAAGGGGCTGATCCAGATTGGGTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AATGTCTTCCCTCTGCCTCATGTGTTTCCAATCTTACCTCCACAGCGGGCTCTGGGGGTTAATGATTACTaGGGGGTTAAGGATCACTTC +
Preference number: 5 (lower is better)
Translates to: NVFPLPHVFPILPPQRALGVNDY*GVKDHF
Trigger: GAAGTGATCCTTAACCCCCAAGTAATCATTAACCCC...CAGAGCCCGCTGTGGAGGTAAGATTGGAAACACATGAGGCAGAGGGAAGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS TCA 90 bp GGGCCCTATTATAGGTCTTGGGATTCACATAAATGTCAGTGTCCATaGCCTGGGCCAGTGCATAGCCATTTCGAAACTGAGTCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: GPYYRSWDSHKCQCP*PGPVHSHFETESGR
Trigger: TCTTCCAGACTCAGTTTCGAAATGGCTATGCACTGGCCCAGGTCATGGACACTGACATTTATGTGAATCCCAAGACCTATAATAGGGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000461505.1
ENST00000491127.5
CDS-3UTR CAA 90 bp TCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCAAGCAAATGCCATGCCTaGTGGGACCTGGATGGATCC +
Preference number: 5 (lower is better)
Translates to: SFLLQPGPEECSFPNIPASKCHA*WDLDGS
Trigger: GGATCCATCCAGGTCCCACAAGGCATGGCATTTGCT...TGCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GTTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACACTCTCATTGGTGGCATaGTTGAAGACCTGGAATTTC +
Preference number: 5 (lower is better)
Translates to: VKESSCAGRPNLDQPLSTLSLVA*LKTWNF
Trigger: GAAATTCCAGGTCTTCAACAATGCCACCAATGAGAG...TGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAAAGTTTTCTCTCATTGGTGGCATaGTTGAAGACCTGGAATTTC +
Preference number: 5 (lower is better)
Translates to: APSSPLSLWVQRGIPKSFLSLVA*LKTWNF
Trigger: GAAATTCCAGGTCTTCAACAATGCCACCAATGAGAG...AAAACTTTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GCCTCCATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATGGGTCGGTGAGTTGCTaGAGGGAGTTCTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: ASIFPASTRSRRVFFSKYGSVSC*REFLRL
Trigger: CAATCTCAAGAACTCCCTCAAGCAACTCACCGACCC...ATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGATGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGGATCACTTCATCAAGAGCAGGCCAGCACAGTaGTACTTGTCCTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: EAGLGVNDYLGVKDHFIKSRPAQ*YLSFCF
Trigger: AAAACAGAAGGACAAGTACAACTGTGCTGGCCTGCT...CTTGATGAAGTGATCCTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTCCGTTTTCCCTGTGTaGGTACTAGCACCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: PDGIMNSQKSNAPGPRMCSVFPV*VLAPSS
Trigger: GGAAGAGGGTGCTAGTACCAACACAGGGAAAACGGA...ACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AGAGATAAGGTTCCCAGTCCTCCCTGGGAATTATATTATCACAGGTCAGTATCAGGAGGACTTCCACCTTaGCCTACAGAAGGACCCCAT +
Preference number: 5 (lower is better)
Translates to: RDKVPSPPWELYYHRSVSGGLPP*PTEGPH
Trigger: ATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCC...TGATACTGACCTGTGATAATATAATTCCCAGGGAGGACTGGGAACCTTATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp ATCTTTCCTGCTTCAACCAGGTCCAGAAGAGTGTTCTTTTCCAAATATTCCAGCAGAATGTGTTGGCTCTaGGCCAGCACCCCCTCCTTT +
Preference number: 5 (lower is better)
Translates to: IFPASTRSRRVFFSKYSSRMCWL*ASTPSF
Trigger: AAAGGAGGGGGTGCTGGCCAAGAGCCAACACATTCT...GCTGGAATATTTGGAAAAGAACACTCTTCTGGACCTGGTTGAAGCAGGAAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CCAGATGGCATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGCTTGAGGGAGTTCTaGAGATTGACAGCGATCAGG +
Preference number: 5 (lower is better)
Translates to: PDGIMNSQKSNAPGPRMCCLREF*RLTAIR
Trigger: CCTGATCGCTGTCAATCTCAAGAACTCCCTCAAGCA...ACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTATGCCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp GTACTAGCACCCTCTTCCCCTCTGAGTCTCTGGGTGCAAAGAGGAATTCCCAAAGATTATTTCACTACTTaGCCTCCATCTTTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: VLAPSSPLSLWVQRGIPKDYFTT*PPSFLL
Trigger: AAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAATC...TTTGGGAATTCCTCTTTGCACCCAGAGACTCAGAGGGGAAGAGGGTGCTAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp ATAATGAATTCACAGAAAAGCAATGCTCCTGGGCCAAGAATGTGTTGGCTCTTGGTAGGGGAGAGTGAGTaGTCATTGGCTAAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: IMNSQKSNAPGPRMCWLLVGESE*SLAKAL
Trigger: AAGAGCCTTAGCCAATGACAACTCACTCTCCCCTAC...CAAGAGCCAACACATTCTTGGCCCAGGAGCATTGCTTTTCTGTGAATTCATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp CATAGGAGAAGATGGCCTGAGGTCCTAAGGGTGTTAAAGAGTCTTCCTGTGCAGGATTATTTCACTACTTaGCCTCCATCTTTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: HRRRWPEVLRVLKSLPVQDYFTT*PPSFLL
Trigger: AAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAATC...CTGCACAGGAAGACTCTTTAACACCCTTAGGACCTCAGGCCATCTTCTCCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp TTAAAGAGTCTTCCTGTGCAGGAAGACCCAATCTGGATCAGCCCCTTTCCACATGATTATTTCACTACTTaGCCTCCATCTTTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: LKSLPVQEDPIWISPFPHDYFTT*PPSFLL
Trigger: AAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAATC...ATGTGGAAAGGGGCTGATCCAGATTGGGTCTTCCTGCACAGGAAGACTCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp ATCTCCTTCAGTTCTGAGGCTGGTCTGGGGGTTAATGATTACTTGGGGGTTAAGGAATTCCCAAAAGTTTaGTGCAGAATAACTGGTATC +
Preference number: 5 (lower is better)
Translates to: ISFSSEAGLGVNDYLGVKEFPKV*CRITGI
Trigger: GATACCAGTTATTCTGCACAAAACTTTTGGGAATTC...CTTAACCCCCAAGTAATCATTAACCCCCAGACCAGCCTCAGAACTGAAGGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AAAAGCATTGAAATTCTGGATTATTTCACTACTTTGCCTCCATCTTTCCTGCTTGGAGGACTTCCACCTTaGCCTACAGAAGGACCCCAT +
Preference number: 5 (lower is better)
Translates to: KSIEILDYFTTLPPSFLLGGLPP*PTEGPH
Trigger: ATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCC...AAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAATCCAGAATTTCAATGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AAAAGTTTTGTGCAGAATAACTGGTATCTATTACTAGGATGCCAGATGATTCTGGGAGGACTTCCACCTTaGCCTACAGAAGGACCCCAT +
Preference number: 5 (lower is better)
Translates to: KSFVQNNWYLLLGCQMILGGLPP*PTEGPH
Trigger: ATGGGGTCCTTCTGTAGGCAAAGGTGGAAGTCCTCC...CAGAATCATCTGGCATCCTAGTAATAGATACCAGTTATTCTGCACAAAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AAAAGTTTTGTGCAGAATAACTGGTATCTATTACTAGGATGCCAGATGATTCTGAAAGGGGACTCTGACTaGGAAATTCCTGAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: KSFVQNNWYLLLGCQMILKGDSD*EIPEAL
Trigger: CAGAGCCTCAGGAATTTCCAAGTCAGAGTCCCCTTT...CAGAATCATCTGGCATCCTAGTAATAGATACCAGTTATTCTGCACAAAACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AAAAGCATTGAAATTCTGGATTATTTCACTACTTTGCCTCCATCTTTCCTGCTTCCAAACACCACAGCTTaGATCTTGGCTGAGGAACAT +
Preference number: 5 (lower is better)
Translates to: KSIEILDYFTTLPPSFLLPNTTA*ILAEEH
Trigger: ATGTTCCTCAGCCAAGATCAAAGCTGTGGTGTTTGG...AAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAATCCAGAATTTCAATGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AAAAGTTTTGTGCAGAATAACTGGTATCTATTACTAGGATGCCAGATGATTCTGTCTTTAATCTTGTACTaGGGGAGCCAGGAGAGCACA +
Preference number: 5 (lower is better)
Translates to: KSFVQNNWYLLLGCQMILSLILY*GSQEST
Trigger: TGTGCTCTCCTGGCTCCCCAAGTACAAGATTAAAGA...CAGAATCATCTGGCATCCTAGTAATAGATACCAGTTATTCTGCACAAAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AAAAGTTTTGTGCAGAATAACTGGTATCTATTACTAGGATGCCAGATGATTCTGCGCTTCTCCTGCTTCTaGAGGTATTTTTGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: KSFVQNNWYLLLGCQMILRFSCF*RYFCLA
Trigger: AGCCAAGCAAAAATACCTCAAGAAGCAGGAGAAGCG...CAGAATCATCTGGCATCCTAGTAATAGATACCAGTTATTCTGCACAAAACTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AAAAGCATTGAAATTCTGGATTATTTCACTACTTTGCCTCCATCTTTCCTGCTTCCAGCACAGTTGTACTaGTCCTTCTGTTTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: KSIEILDYFTTLPPSFLLPAQLY*SFCFWL
Trigger: GAGCCAAAAACAGAAGGACAAGTACAACTGTGCTGG...AAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAATCCAGAATTTCAATGCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS-3UTR CAA 90 bp AAAAGCATTGAAATTCTGGATTATTTCACTACTTTGCCTCCATCTTTCCTGCTTTCATTGGTGGCATTGTaGAAGACCTGGAATTTCGAC +
Preference number: 5 (lower is better)
Translates to: KSIEILDYFTTLPPSFLLSLVAL*KTWNFD
Trigger: GTCGAAATTCCAGGTCTTCAACAATGCCACCAATGA...AAGCAGGAAAGATGGAGGCAAAGTAGTGAAATAATCCAGAATTTCAATGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS CCA 72 bp CATGTCCAGGATGAGGGTGTGGAAGGTGACGAAGGGTaGGACGCTGGCCAGCATGTCACTGGGCTCGCCGGG +
Preference number: 6 (lower is better)
Translates to: HVQDEGVEGDEG*DAGQHVTGLAG
Trigger: CCCGGCGAGCCCAGTGACATGCTGGCCAGCGTCCCACCCTTCGTCACCTTCCACACCCTCATCCTGGACATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS CCA 72 bp CCCAAGTGCCAGGCACTCTGTAGGCAGCATGAGGACTaGCTGAGCCCTCACAGGGCGGTCAGGGTCTCTGCG +
Preference number: 6 (lower is better)
Translates to: PKCQALCRQHED*LSPHRAVRVSA
Trigger: CGCAGAGACCCTGACCGCCCTGTGAGGGCTCAGCCAGTCCTCATGCTGCCTACAGAGTGCCTGGCACTTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367135.8
ENST00000491127.5
CDS TCA 72 bp AGTGCCAGGCACTCTGTAGGCAGCATGAGGACTGGCTaGGCCCTCACAGGGCGGTCAGGGTCTCTGCGTGAA +
Preference number: 6 (lower is better)
Translates to: SARHSVGSMRTG*ALTGRSGSLRE
Trigger: TTCACGCAGAGACCCTGACCGCCCTGTGAGGGCTCAGCCAGTCCTCATGCTGCCTACAGAGTGCCTGGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367135.8
ENST00000491127.5
CDS CCA 72 bp CCTGGGCTGGCTCATATCTGGGGCATTTACAAGCAGTaGGTGAGCAAAGCCGGCTGGGCAGGGCTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: PGLAHIWGIYKQ*VSKAGWAGLQV
Trigger: CACCTGCAGCCCTGCCCAGCCGGCTTTGCTCACCCACTGCTTGTAAATGCCCCAGATATGAGCCAGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367134.2
ENST00000367135.8
CDS TCA 72 bp GGCTGGCTCATATCTGGGGCATTTACAAGCAGTGGGTaGGCAAAGCCGGCTGGGCAGGGCTGCAGGTGTGTC +
Preference number: 6 (lower is better)
Translates to: GWLISGAFTSSG*AKPAGQGCRCV
Trigger: GACACACCTGCAGCCCTGCCCAGCCGGCTTTGCTCACCCACTGCTTGTAAATGCCCCAGATATGAGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367134.2
ENST00000367135.8
CDS GCA 72 bp ATGATGGCGGTGAGGCAGGCTAGCGTAGCTGACACGTaGAGCCTCTCAGCCTCCATGGCTGCTGTGTCCACA +
Preference number: 6 (lower is better)
Translates to: MMAVRQASVADT*SLSASMAAVST
Trigger: TGTGGACACAGCAGCCATGGAGGCTGAGAGGCTGCACGTGTCAGCTACGCTAGCCTGCCTCACCGCCATCAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS CCA 72 bp GTCTACCACGTAGCGGGGCCTGGGCTGGCTCATATCTaGGGCATTTACAAGCAGTGGGTGAGCAAAGCCGGC +
Preference number: 6 (lower is better)
Translates to: VYHVAGPGLAHI*GIYKQWVSKAG
Trigger: GCCGGCTTTGCTCACCCACTGCTTGTAAATGCCCCAGATATGAGCCAGCCCAGGCCCCGCTACGTGGTAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367134.2
ENST00000367135.8
CDS GCA 72 bp GCCCTCACAGGGCGGTCAGGGTCTCTGCGTGAAACATaGTCCCGAACATCTCCTGCTCTAAGTCCCAGTAGC +
Preference number: 6 (lower is better)
Translates to: ALTGRSGSLRET*SRTSPALSPSS
Trigger: GCTACTGGGACTTAGAGCAGGAGATGTTCGGGAGCATGTTTCACGCAGAGACCCTGACCGCCCTGTGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367135.8
ENST00000491127.5
CDS CCA 72 bp GGGAGTATGCGGCTCTGTCTACCACGTAGCGGGGCCTaGGCTGGCTCATATCTGGGGCATTTACAAGCAGTG +
Preference number: 6 (lower is better)
Translates to: GSMRLCLPRSGA*AGSYLGHLQAV
Trigger: CACTGCTTGTAAATGCCCCAGATATGAGCCAGCCCAGGCCCCGCTACGTGGTAGACAGAGCCGCATACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367134.2
ENST00000367135.8
CDS GCA 72 bp CTTCTCAAACTCATCGTCGAAGAGGGTAAGGGAGTATaGGGCTCTGTCTACCACGTAGCGGGGCCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: LLKLIVEEGKGV*GSVYHVAGPGL
Trigger: CAGCCCAGGCCCCGCTACGTGGTAGACAGAGCCGCATACTCCCTTACCCTCTTCGACGATGAGTTTGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS GCA 72 bp AGTCCGAAGATGTACTTGAGCACCGAAATCAGGATCTaGAGGCCGGCGGCCGTCATGAAGCCCCGGATGAAG +
Preference number: 6 (lower is better)
Translates to: SPKMYLSTEIRI*RPAAVMKPRMK
Trigger: CTTCATCCGGGGCTTCATGACGGCCGCCGGCCTGCAGATCCTGATTTCGGTGCTCAAGTACATCTTCGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000469392.1
CDS GCA 72 bp GGCTCTCTAGGGCGGTCAGGGTCTCTGCGTGAAACATaGTCCCGAACATCTCCTGCTCTAAGTCCCAGTAGC +
Preference number: 6 (lower is better)
Translates to: GSLGRSGSLRET*SRTSPALSPSS
Trigger: GCTACTGGGACTTAGAGCAGGAGATGTTCGGGAGCATGTTTCACGCAGAGACCCTGACCGCCCTAGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340781.8
ENST00000367134.2
CDS GCA 72 bp GGGACCAGCCAGGCCCCCATGGTGTGCCGGGATCTTTaGCTAAGTTATCCCATCCAGTCTGAATCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: GTSQAPMVCRDL*LSYPIQSESSA
Trigger: TGCTGAGGATTCAGACTGGATGGGATAACTTAGGCAAAGATCCCGGCACACCATGGGGGCCTGGCTGGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491127.5
CDS CCA 72 bp CTCAGCATCCCCTGGAGCCCCTTGGAAGTTGTGTCCTaGGGTCACGTCTCTAGCATTTGCCTGGGCAAAGAG +
Preference number: 6 (lower is better)
Translates to: LSIPWSPLEVVS*GHVSSICLGKE
Trigger: CTCTTTGCCCAGGCAAATGCTAGAGACGTGACCCCAGGACACAACTTCCAAGGGGCTCCAGGGGATGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS CCA 72 bp AGGAGGAAAAGGGTGGTTGGTGGCGGAAGACCAATGTaGTTCAGCAGTTCCAACGACCCGCCCCACACACAC +
Preference number: 6 (lower is better)
Translates to: RRKRVVGGGRPM*FSSSNDPPHTH
Trigger: GTGTGTGTGGGGCGGGTCGTTGGAACTGCTGAACCACATTGGTCTTCCGCCACCAACCACCCTTTTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469392.1
CDS TCA 72 bp TCTGGAGCTCCGTGCAGTCCTAGCGTAGCAGTAGCTTaGGGGAATTGGACCATCTGTGACCTTCACCTGCCC +
Preference number: 6 (lower is better)
Translates to: SGAPCSPSVAVA*GNWTICDLHLP
Trigger: GGGCAGGTGAAGGTCACAGATGGTCCAATTCCCTCAAGCTACTGCTACGCTAGGACTGCACGGAGCTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469392.1
CDS TCA 72 bp ACTCGGAGAGGTAGATGGCCACAAAGCCAAACTGCATaGAGCCCAGACCCATCTGAGAGGAGGAAAAGGGTG +
Preference number: 6 (lower is better)
Translates to: TRRGRWPQSQTA*SPDPSERRKRV
Trigger: CACCCTTTTCCTCCTCTCAGATGGGTCTGGGCTTCATGCAGTTTGGCTTTGTGGCCATCTACCTCTCCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469392.1
CDS GCA 72 bp TTGGAAGTTGTGTCCTGGGGTCACGTCTCTAGCATTTaGCTGGGCAAAGAGGACTGCGTCATGTATGCTGGG +
Preference number: 6 (lower is better)
Translates to: LEVVSWGHVSSI*LGKEDCVMYAG
Trigger: CCCAGCATACATGACGCAGTCCTCTTTGCCCAGGCAAATGCTAGAGACGTGACCCCAGGACACAACTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS GCA 72 bp TGCTCCCGAACATCTCCTGCTCTAAGTCCCAGTAGCTaGGAATGTCCTCCTCTGAGTCGTACAAGGAGAGCT +
Preference number: 6 (lower is better)
Translates to: CSRTSPALSPSS*ECPPLSRTRRA
Trigger: AGCTCTCCTTGTACGACTCAGAGGAGGACATTCGCAGCTACTGGGACTTAGAGCAGGAGATGTTCGGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS CCA 72 bp CATGAAGCCCAGACCCATCTGAGAGGAGGAAAAGGGTaGTTGGTGGCGGAAGACCAATGTGGTTCAGCAGTT +
Preference number: 6 (lower is better)
Translates to: HEAQTHLRGGKG*LVAEDQCGSAV
Trigger: AACTGCTGAACCACATTGGTCTTCCGCCACCAACCACCCTTTTCCTCCTCTCAGATGGGTCTGGGCTTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469392.1
CDS CAA 72 bp CAGGAGAGCACAGGCAGCAGCCCAAACACCACAGCTTaGATCTTGGCTGAGGAACATCTGAAGGCATTGCGA +
Preference number: 6 (lower is better)
Translates to: QESTGSSPNTTA*ILAEEHLKALR
Trigger: TCGCAATGCCTTCAGATGTTCCTCAGCCAAGATCAAAGCTGTGGTGTTTGGGCTGCTGCCTGTGCTCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS CAA 90 bp TTGGGGAGCCAGGAGAGCACAGGCAGCAGCCCAAACACCACAGCTTaGATCTTGGCTGAGGAACATCTGAAGGCATTGCGAAGTTTCTCT +
Preference number: 6 (lower is better)
Translates to: LGSQESTGSSPNTTA*ILAEEHLKALRSFS
Trigger: AGAGAAACTTCGCAATGCCTTCAGATGTTCCTCAGCCAAGATCAAAGCTGTGGTGTTTGGGCTGCTGCCTGTGCTCTCCTGGCTCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS CAA 90 bp GCCTGGGCAAAGAGGACTGCGTCATGTATGCTGGGAAAGACGTGCTaGCATTCTAGACTCCCATCCTCAAAGACGCCTCCATGGCTAATG +
Preference number: 6 (lower is better)
Translates to: AWAKRTASCMLGKTC*HSRLPSSKTPPWLM
Trigger: CATTAGCCATGGAGGCGTCTTTGAGGATGGGAGTCTAGAATGCAAGCACGTCTTTCCCAGCATACATGACGCAGTCCTCTTTGCCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS TCA 72 bp GGGAACCCGCGTTGGATTTCTCCCACGATCTGCATGTaGTACTTTTTGGGCATCTTACAGCCCCCGGAGATA +
Preference number: 6 (lower is better)
Translates to: GNPRWISPTICM*YFLGILQPPEI
Trigger: TATCTCCGGGGGCTGTAAGATGCCCAAAAAGTATCACATGCAGATCGTGGGAGAAATCCAACGCGGGTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000469392.1
CDS GCA 72 bp GGTCACGTCTCTAGCATTTGCCTGGGCAAAGAGGACTaGGTCATGTATGCTGGGAAAGACGTGCTTGCATTC +
Preference number: 6 (lower is better)
Translates to: GHVSSICLGKED*VMYAGKDVLAF
Trigger: GAATGCAAGCACGTCTTTCCCAGCATACATGACGCAGTCCTCTTTGCCCAGGCAAATGCTAGAGACGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS GCA 72 bp ATTGGACCATCTGTGACCTTCACCTGCCCTTCACTGTaGTCTACATGGCTGCCATCAGACCTTCAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: IGPSVTFTCPSL*STWLPSDLQLL
Trigger: AAGGAGCTGAAGGTCTGATGGCAGCCATGTAGAGCACAGTGAAGGGCAGGTGAAGGTCACAGATGGTCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469392.1
CDS GCA 72 bp GCCTCGTTTGTTAACTCCCAGATTCTGAACCCTGTATaGTCACGAGTCCACAGACCCCTAGACCTTTGGTGC +
Preference number: 6 (lower is better)
Translates to: ASFVNSQILNPV*SRVHRPLDLWC
Trigger: GCACCAAAGGTCTAGGGGTCTGTGGACTCGTGAGCATACAGGGTTCAGAATCTGGGAGTTAACAAACGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491127.5
CDS CCA 72 bp AAGTTGTGTCCTGGGGTCACGTCTCTAGCATTTGCCTaGGCAAAGAGGACTGCGTCATGTATGCTGGGAAAG +
Preference number: 6 (lower is better)
Translates to: KLCPGVTSLAFA*AKRTASCMLGK
Trigger: CTTTCCCAGCATACATGACGCAGTCCTCTTTGCCCAGGCAAATGCTAGAGACGTGACCCCAGGACACAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS CAA 72 bp GCACCGCTGATGAGAGCGAAGATGAGCGAGGCGATGTaGGTGTGGGGGAGGTTTTTGCAAATGTCAATGAAG +
Preference number: 6 (lower is better)
Translates to: APLMRAKMSEAM*VWGRFLQMSMK
Trigger: CTTCATTGACATTTGCAAAAACCTCCCCCACACCAACATCGCCTCGCTCATCTTCGCTCTCATCAGCGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000469392.1
CDS CAA 72 bp CTTGCTCTTCCTCCACAGGTAGTAGGGGTCGGTGAGTaGCTTGAGGGAGTTCTTGAGATTGACAGCGATCAG +
Preference number: 6 (lower is better)
Translates to: LALPPQVVGVGE*LEGVLEIDSDQ
Trigger: CTGATCGCTGTCAATCTCAAGAACTCCCTCAAGCAACTCACCGACCCCTACTACCTGTGGAGGAAGAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS CAA 90 bp ACCAGGAAGGCACCGCTGATGAGAGCGAAGATGAGCGAGGCGATGTaGGTGTGGGGGAGGTTTTTGCAAATGTCAATGAAGGTAAAGACG +
Preference number: 6 (lower is better)
Translates to: TRKAPLMRAKMSEAM*VWGRFLQMSMKVKT
Trigger: CGTCTTTACCTTCATTGACATTTGCAAAAACCTCCCCCACACCAACATCGCCTCGCTCATCTTCGCTCTCATCAGCGGTGCCTTCCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000469392.1
CDS CAA 90 bp GTGGGCCTCATTCTCCGCTTCTCCTGCTTCTTGAGGTATTTTTGCTaGGCTAGTAATACTTTCTGGGGGTCCATGCCTGTCTTGGCGATG +
Preference number: 6 (lower is better)
Translates to: VGLILRFSCFLRYFC*ASNTFWGSMPVLAM
Trigger: CATCGCCAAGACAGGCATGGACCCCCAGAAAGTATTACTAGCCAAGCAAAAATACCTCAAGAAGCAGGAGAAGCGGAGAATGAGGCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS GCA 72 bp AGAGGACTGCGTCATGTATGCTGGGAAAGACGTGCTTaGATTCTAGACTCCCATCCTCAAAGACGCCTCCAT +
Preference number: 6 (lower is better)
Translates to: RGLRHVCWERRA*ILDSHPQRRLH
Trigger: ATGGAGGCGTCTTTGAGGATGGGAGTCTAGAATGCAAGCACGTCTTTCCCAGCATACATGACGCAGTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS GCA 72 bp GCAAAGAGGACTGCGTCATGTATGCTGGGAAAGACGTaGTTGCATTCTAGACTCCCATCCTCAAAGACGCCT +
Preference number: 6 (lower is better)
Translates to: AKRTASCMLGKT*LHSRLPSSKTP
Trigger: AGGCGTCTTTGAGGATGGGAGTCTAGAATGCAAGCACGTCTTTCCCAGCATACATGACGCAGTCCTCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS CCA 72 bp ATTGGTGGCATTGTTGAAGACCTGGAATTTCGACTCTaGGGCCAGCTGCAGACAGATGTTACCCACCAGGAT +
Preference number: 6 (lower is better)
Translates to: IGGIVEDLEFRL*GQLQTDVTHQD
Trigger: ATCCTGGTGGGTAACATCTGTCTGCAGCTGGCCCCAGAGTCGAAATTCCAGGTCTTCAACAATGCCACCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS CCA 72 bp CATTTGCCTGGGCAAAGAGGACTGCGTCATGTATGCTaGGAAAGACGTGCTTGCATTCTAGACTCCCATCCT +
Preference number: 6 (lower is better)
Translates to: HLPGQRGLRHVC*ERRACILDSHP
Trigger: AGGATGGGAGTCTAGAATGCAAGCACGTCTTTCCCAGCATACATGACGCAGTCCTCTTTGCCCAGGCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS CAA 72 bp CTCCCATCCTCAAAGACGCCTCCATGGCTAATGTCATaGTACACCTGGGCATGGATGTTCACCAAGAAGACC +
Preference number: 6 (lower is better)
Translates to: LPSSKTPPWLMS*YTWAWMFTKKT
Trigger: GGTCTTCTTGGTGAACATCCATGCCCAGGTGTACAATGACATTAGCCATGGAGGCGTCTTTGAGGATGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS CAA 72 bp AAGAGGACTGCGTCATGTATGCTGGGAAAGACGTGCTaGCATTCTAGACTCCCATCCTCAAAGACGCCTCCA +
Preference number: 6 (lower is better)
Translates to: KRTASCMLGKTC*HSRLPSSKTPP
Trigger: TGGAGGCGTCTTTGAGGATGGGAGTCTAGAATGCAAGCACGTCTTTCCCAGCATACATGACGCAGTCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS CCA 72 bp GGAACATCTGAAGGCATTGCGAAGTTTCTCTCCCACTaGGTATGTCCGGTCCTTCTTCTCAAACTCATCGTC +
Preference number: 6 (lower is better)
Translates to: GTSEGIAKFLSH*VCPVLLLKLIV
Trigger: GACGATGAGTTTGAGAAGAAGGACCGGACATACCCAGTGGGAGAGAAACTTCGCAATGCCTTCAGATGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
CDS CCA 72 bp TTTGCAAATGTCAATGAAGGTAAAGACGATGGACCCTaGGCCTGTGTAGGAGGGGATGGTCAGTCCGAAGAT +
Preference number: 6 (lower is better)
Translates to: FANVNEGKDDGP*ACVGGDGQSED
Trigger: ATCTTCGGACTGACCATCCCCTCCTACACAGGCCCAGGGTCCATCGTCTTTACCTTCATTGACATTTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000469392.1
CDS TCA 72 bp GAAGGAGGAGAGGAAGCTCACTACCCAGATGCACTGTaGAAAGAGAGATGTCAAAAGCAGACCTGGGGAAAA +
Preference number: 6 (lower is better)
Translates to: EGGEEAHYPDAL*KERCQKQTWGK
Trigger: TTTTCCCCAGGTCTGCTTTTGACATCTCTCTTTTCACAGTGCATCTGGGTAGTGAGCTTCCTCTCCTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461505.1
CDS CCA 72 bp TTGCATTCTAGACTCCCATCCTCAAAGACGCCTCCATaGCTAATGTCATTGTACACCTGGGCATGGATGTTC +
Preference number: 6 (lower is better)
Translates to: LHSRLPSSKTPP*LMSLYTWAWMF
Trigger: GAACATCCATGCCCAGGTGTACAATGACATTAGCCATGGAGGCGTCTTTGAGGATGGGAGTCTAGAATGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000491127.5
CDS GCA 72 bp ATTCACATAAATGTCAGTGTCCATGACCTGGGCCAGTaGATAGCCATTTCGAAACTGAGTCTGGAAGACCAC +
Preference number: 6 (lower is better)
Translates to: IHINVSVHDLGQ*IAISKLSLEDH
Trigger: GTGGTCTTCCAGACTCAGTTTCGAAATGGCTATGCACTGGCCCAGGTCATGGACACTGACATTTATGTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000461505.1
ENST00000491127.5
CDS TCA 72 bp TATAGGTCTTGGGATTCACATAAATGTCAGTGTCCATaGCCTGGGCCAGTGCATAGCCATTTCGAAACTGAG +
Preference number: 6 (lower is better)
Translates to: YRSWDSHKCQCP*PGPVHSHFETE
Trigger: CTCAGTTTCGAAATGGCTATGCACTGGCCCAGGTCATGGACACTGACATTTATGTGAATCCCAAGACCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340781.8
ENST00000367134.2
ENST00000367135.8
ENST00000461505.1
ENST00000491127.5