RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC26A5 (Homo sapiens)

Ensembl gene IDs: ENSG00000170615

Ensembl transcript IDs: ENST00000306312.8, ENST00000339444.10, ENST00000354356.8, ENST00000356767.8, ENST00000393723.2, ENST00000393727.5, ENST00000393729.5, ENST00000393730.5, ENST00000393735.6, ENST00000423416.5, ENST00000432958.6, ENST00000445809.5, ENST00000454864.5, ENST00000456463.5, ENST00000487407.1

Found 888 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGTGAGGTCCTCATCTATGCCTCAGGAGTGGCAGGAGTGGCATTaGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTTCCTGTT +
Preference number: 1 (lower is better)
Translates to: RVRSSSMPQEWQEWH*APSPPGKGEPRLPV
Trigger: AACAGGAAGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCCTGAGGCATAGATGAGGACCTCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR CCA 90 bp CATCCTAGGGTGAGGTCCTCATCTATGCCTCAGGAGTGGCAGGAGTaGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTT +
Preference number: 1 (lower is better)
Translates to: HPRVRSSSMPQEWQE*HWAPSPPGKGEPRL
Trigger: AAGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCCTGAGGCATAGATGAGGACCTCACCCTAGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR CCA 90 bp TATGCCTCAGGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTaGGAAGGGGGAGCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTA +
Preference number: 1 (lower is better)
Translates to: YASGVAGVALGSKSS*EGGAEASCSASASL
Trigger: TAGAGAGGCACTTGCTGAACAGGAAGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCCTGAGGCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR CCA 90 bp CGATGGCTATGGCAATGGCATCTACGTACACAAGGTGGAAGAGGCTaGTGTCCGGATTGGCTGGAGGTAGCAGCCCTAGAGGAAGTGTTC +
Preference number: 1 (lower is better)
Translates to: RWLWQWHLRTQGGRG*CPDWLEVAALEEVF
Trigger: GAACACTTCCTCTAGGGCTGCTACCTCCAGCCAATCCGGACACCAGCCTCTTCCACCTTGTGTACGTAGATGCCATTGCCATAGCCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR TCA 90 bp ATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTaGACTGCTTGGATTACACGGCATTTCCCCTACGGTCTCCATCTT +
Preference number: 1 (lower is better)
Translates to: IPELAFKPCPPGPKA*TAWITRHFPYGLHL
Trigger: AAGATGGAGACCGTAGGGGAAATGCCGTGTAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339444.10
3UTR CCA 90 bp GAAAATCCAACGATGGCTATGGCAATGGCATCTACGTACACAAGGTaGAAGAGGCTGGTGTCCGGATTGGCTGGAGGTAGCAGCCCTAGA +
Preference number: 1 (lower is better)
Translates to: ENPTMAMAMASTYTR*KRLVSGLAGGSSPR
Trigger: TCTAGGGCTGCTACCTCCAGCCAATCCGGACACCAGCCTCTTCCACCTTGTGTACGTAGATGCCATTGCCATAGCCATCGTTGGATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR TCA 90 bp GAGGCCAAACAACCTGCAAGCTGTGTCTTCCCACCGGTTCCCTCCTaGACAAGGCTTCGAGACAAGGAGCATGAAATTGAAAAGGTCTGG +
Preference number: 1 (lower is better)
Translates to: EAKQPASCVFPPVPS*TRLRDKEHEIEKVW
Trigger: CCAGACCTTTTCAATTTCATGCTCCTTGTCTCGAAGCCTTGTTCAGGAGGGAACCGGTGGGAAGACACAGCTTGCAGGTTGTTTGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR CCA 90 bp TGGCCATGGAGATGGTCACTGAAAATCCAACGATGGCTATGGCAATaGCATCTACGTACACAAGGTGGAAGAGGCTGGTGTCCGGATTGG +
Preference number: 1 (lower is better)
Translates to: WPWRWSLKIQRWLWQ*HLRTQGGRGWCPDW
Trigger: CCAATCCGGACACCAGCCTCTTCCACCTTGTGTACGTAGATGCCATTGCCATAGCCATCGTTGGATTTTCAGTGACCATCTCCATGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR CCA 90 bp AGGTCTTGGCCATGGAGATGGTCACTGAAAATCCAACGATGGCTATaGCAATGGCATCTACGTACACAAGGTGGAAGAGGCTGGTGTCCG +
Preference number: 1 (lower is better)
Translates to: RSWPWRWSLKIQRWL*QWHLRTQGGRGWCP
Trigger: CGGACACCAGCCTCTTCCACCTTGTGTACGTAGATGCCATTGCCATAGCCATCGTTGGATTTTCAGTGACCATCTCCATGGCCAAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR CCA 90 bp TTGCTAAGGTCTTGGCCATGGAGATGGTCACTGAAAATCCAACGATaGCTATGGCAATGGCATCTACGTACACAAGGTGGAAGAGGCTGG +
Preference number: 1 (lower is better)
Translates to: LLRSWPWRWSLKIQR*LWQWHLRTQGGRGW
Trigger: CCAGCCTCTTCCACCTTGTGTACGTAGATGCCATTGCCATAGCCATCGTTGGATTTTCAGTGACCATCTCCATGGCCAAGACCTTAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR CCA 90 bp TGCCGTCAACCTGGTAGCCATGTTTATTTGCTAAGGTCTTGGCCATaGAGATGGTCACTGAAAATCCAACGATGGCTATGGCAATGGCAT +
Preference number: 1 (lower is better)
Translates to: CRQPGSHVYLLRSWP*RWSLKIQRWLWQWH
Trigger: ATGCCATTGCCATAGCCATCGTTGGATTTTCAGTGACCATCTCCATGGCCAAGACCTTAGCAAATAAACATGGCTACCAGGTTGACGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR CCA 90 bp CCTGATTGCCGTCAACCTGGTAGCCATGTTTATTTGCTAAGGTCTTaGCCATGGAGATGGTCACTGAAAATCCAACGATGGCTATGGCAA +
Preference number: 1 (lower is better)
Translates to: PDCRQPGSHVYLLRS*PWRWSLKIQRWLWQ
Trigger: TTGCCATAGCCATCGTTGGATTTTCAGTGACCATCTCCATGGCCAAGACCTTAGCAAATAAACATGGCTACCAGGTTGACGGCAATCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR TCA 90 bp TGTTCAGCAAGTGCCTCTCTAAGTTGGCTGCCTAAAACTGCATCATaGATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAA +
Preference number: 1 (lower is better)
Translates to: CSASASLSWLPKTAS*MLWNSSSHRAGFSK
Trigger: TTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAGTTTTAGGCAGCCAACTTAGAGAGGCACTTGCTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR TCA 90 bp GCACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTAATATaGCCAGCAGAATCATTAATGAGGCCAAACAACCTGCAAGCTGTG +
Preference number: 1 (lower is better)
Translates to: AQPGAMIQRGIQLLI*PAESLMRPNNLQAV
Trigger: CACAGCTTGCAGGTTGTTTGGCCTCATTAATGATTCTGCTGGTCATATTAGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR GCA 90 bp ATCTACTTCTGCATCTGCTTTGACAACAGTTGCGTTGGCCATATTTaGATTTCCGACTTCCTTAGCGTACTTCCGCATGGCCTTTCTCCT +
Preference number: 1 (lower is better)
Translates to: IYFCICFDNSCVGHI*ISDFLSVLPHGLSP
Trigger: AGGAGAAAGGCCATGCGGAAGTACGCTAAGGAAGTCGGAAATGCAAATATGGCCAACGCAACTGTTGTCAAAGCAGATGCAGAAGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR CCA 90 bp CAACCTGGTAGCCATGTTTATTTGCTAAGGTCTTGGCCATGGAGATaGTCACTGAAAATCCAACGATGGCTATGGCAATGGCATCTACGT +
Preference number: 1 (lower is better)
Translates to: QPGSHVYLLRSWPWR*SLKIQRWLWQWHLR
Trigger: ACGTAGATGCCATTGCCATAGCCATCGTTGGATTTTCAGTGACCATCTCCATGGCCAAGACCTTAGCAAATAAACATGGCTACCAGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR-3UTR CCA 90 bp CTGGGAAGGGGGAGCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTGGCTCCAAGTCCTCCTaGGAAGGGGGAGCCGAGGCT +
Preference number: 2 (lower is better)
Translates to: LGRGSRGFLFSKCLSKLAGSKSS*EGGAEA
Trigger: AGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCC...AGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGCTCCCCCTTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR-3UTR CCA 90 bp GTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTGCCGACAGCACAGCCTaGGGCAATGATTCAAAGAGG +
Preference number: 2 (lower is better)
Translates to: VAGVALGSKSSWEGGAEAADSTA*GNDSKR
Trigger: CCTCTTTGAATCATTGCCCCAGGCTGTGCTGTCGGC...AGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR GCA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTTCCTGTTCAGCAAGTaGCTCTCTAAGTTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGFLFSK*LSKLAA
Trigger: GGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAA...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR-3UTR GCA 90 bp GTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTAAACTGCATCATGAATaGTGTGGAACAGCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: VAGVALGSKSSWEGGAEAKLHHE*CGTAAP
Trigger: GGGAGCTGCTGTTCCACAGCATTCATGATGCAGTTT...AGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR-3UTR GCA 90 bp GTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTTGCGTTGGCCATATTTaGATTTCCGACTTCCTTAGC +
Preference number: 2 (lower is better)
Translates to: VAGVALGSKSSWEGGAEACVGHI*ISDFLS
Trigger: GCTAAGGAAGTCGGAAATGCAAATATGGCCAACGCA...AGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR GCA 90 bp GGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGTGCGTTGGCCATATTTaGATTTCCGACTTCCTTAGC +
Preference number: 2 (lower is better)
Translates to: GVAGVALGSKSSWEGGAECVGHI*ISDFLS
Trigger: GCTAAGGAAGTCGGAAATGCAAATATGGCCAACGCA...CTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR GCA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCGGGAGATCTGAGAACTaGATAAACATTCCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGGRSEN*INIPFR
Trigger: CCTGAAGGGAATGTTTATGCAGTTCTCAGATCTCCC...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR TCA 90 bp CTTCCGCATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTCCACCGGTTCCCTCCTaGACAAGGCTTCGAGACAAG +
Preference number: 2 (lower is better)
Translates to: LPHGLSPCSHDDCWVHSSPPVPS*TRLRDK
Trigger: CTTGTCTCGAAGCCTTGTTCAGGAGGGAACCGGTGG...ACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATGCGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR GCA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCGGGGGCATAAATCTTTaGATTTCCTCAGGAAATGTG +
Preference number: 2 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGGGINL*ISSGNV
Trigger: CACATTTCCTGAGGAAATGCAAAGATTTATGCCCCC...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR-3UTR GCA 90 bp GAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGGGGGGCATAAATCTTTaGATTTCCTCAGGAAATGTG +
Preference number: 2 (lower is better)
Translates to: EWQEWHWAPSPPGKGEPRGGINL*ISSGNV
Trigger: CACATTTCCTGAGGAAATGCAAAGATTTATGCCCCC...CCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR-3UTR TCA 90 bp GTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTAAAATCTATTCCGAGTaGGGTCATTCACAACTTGTG +
Preference number: 2 (lower is better)
Translates to: VAGVALGSKSSWEGGAEAKIYSE*GHSQLV
Trigger: CACAAGTTGTGAATGACCTCACTCGGAATAGATTTT...AGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR-3UTR TCA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCAAAATCTATTCCGAGTaGGGTCATTCACAACTTGTG +
Preference number: 2 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGKIYSE*GHSQLV
Trigger: CACAAGTTGTGAATGACCTCACTCGGAATAGATTTT...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR-3UTR GCA 90 bp GGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGATCTACTTCTGCATCTaGTTTGACAACAGTTGCGTT +
Preference number: 2 (lower is better)
Translates to: GVAGVALGSKSSWEGGAEIYFCI*FDNSCV
Trigger: AACGCAACTGTTGTCAAAGCAGATGCAGAAGTAGAT...CTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR GCA 90 bp GGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGTTCTTTTACAATCCCTaGCAGAGTTTTCACTCCAAC +
Preference number: 2 (lower is better)
Translates to: GVAGVALGSKSSWEGGAEFFYNP*QSFHSN
Trigger: GTTGGAGTGAAAACTCTGGCAGGGATTGTAAAAGAA...CTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR-3UTR GCA 90 bp CTGGGAAGGGGGAGCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTTTCCTGTTCAGCAAGTaGCTCTCTAAGTTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: LGRGSRGFLFSKCLSKLAFLFSK*LSKLAA
Trigger: GGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAA...AGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGCTCCCCCTTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR-3UTR CCA 90 bp CTGGGAAGGGGGAGCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTGTGGACGTTATCCCCTaGGGGCATAAATCTTTGCAT +
Preference number: 2 (lower is better)
Translates to: LGRGSRGFLFSKCLSKLAVDVIP*GHKSLH
Trigger: ATGCAAAGATTTATGCCCCCAGGGGATAACGTCCAC...AGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGCTCCCCCTTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR-3UTR CCA 90 bp CTTCCGCATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTGGAAGAGTGAGCCAATaGAATTGCACAGTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: LPHGLSPCSHDDCWVHSSGRVSQ*NCTVPG
Trigger: CCCTGGGACTGTGCAATTCCATTGGCTCACTCTTCC...ACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATGCGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CCA 90 bp TTTGCATTTCCGACTTCCTTAGCGTACTTCCGCATGGCCTTTCTCCTTGCTCCCTCTATGCCTCAGGAGTaGCAGGAGTGGCATTGGGCT +
Preference number: 2 (lower is better)
Translates to: FAFPTSLAYFRMAFLLAPSMPQE*QEWHWA
Trigger: AGCCCAATGCCACTCCTGCCACTCCTGAGGCATAGA...GGGAGCAAGGAGAAAGGCCATGCGGAAGTACGCTAAGGAAGTCGGAAATGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR GCA 90 bp TTTGCATTTCCGACTTCCTTAGCGTACTTCCGCATGGCCTTTCTCCTTGCTCCCCATGGCCTTTCTCCTTaGTCCCATGATGACTGCTGG +
Preference number: 2 (lower is better)
Translates to: FAFPTSLAYFRMAFLLAPHGLSP*SHDDCW
Trigger: CCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATG...GGGAGCAAGGAGAAAGGCCATGCGGAAGTACGCTAAGGAAGTCGGAAATGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CCA 90 bp TGGCTATGGCAATGGCATCTACGTACACAAGGTGGAAGAGGCTGGTGTCCGGATTCCCATGATGACTGCTaGGTTCACTCCAGTCTTTCG +
Preference number: 2 (lower is better)
Translates to: WLWQWHLRTQGGRGWCPDSHDDC*VHSSLS
Trigger: CGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGA...ATCCGGACACCAGCCTCTTCCACCTTGTGTACGTAGATGCCATTGCCATAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR-3UTR CCA 90 bp TTTGCATTTCCGACTTCCTTAGCGTACTTCCGCATGGCCTTTCTCCTTGCTCCCGGAAGAGTGAGCCAATaGAATTGCACAGTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: FAFPTSLAYFRMAFLLAPGRVSQ*NCTVPG
Trigger: CCCTGGGACTGTGCAATTCCATTGGCTCACTCTTCC...GGGAGCAAGGAGAAAGGCCATGCGGAAGTACGCTAAGGAAGTCGGAAATGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CCA 90 bp CCCCATCCTAGGGTGAGGTCCTCATCTATGCCTCAGGAGTGGCAGGAGTGGCATCTGAAAATCCAACGATaGCTATGGCAATGGCATCTA +
Preference number: 2 (lower is better)
Translates to: PHPRVRSSSMPQEWQEWHLKIQR*LWQWHL
Trigger: TAGATGCCATTGCCATAGCCATCGTTGGATTTTCAG...ATGCCACTCCTGCCACTCCTGAGGCATAGATGAGGACCTCACCCTAGGATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR-3UTR GCA 90 bp CCCCATCCTAGGGTGAGGTCCTCATCTATGCCTCAGGAGTGGCAGGAGTGGCATATCTACTTCTGCATCTaGTTTGACAACAGTTGCGTT +
Preference number: 2 (lower is better)
Translates to: PHPRVRSSSMPQEWQEWHIYFCI*FDNSCV
Trigger: AACGCAACTGTTGTCAAAGCAGATGCAGAAGTAGAT...ATGCCACTCCTGCCACTCCTGAGGCATAGATGAGGACCTCACCCTAGGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CCA 90 bp CTTCCGCATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTAGTGCCTCTCTAAGTTaGCTGCCTAAAACTGCATCA +
Preference number: 2 (lower is better)
Translates to: LPHGLSPCSHDDCWVHSSSASLS*LPKTAS
Trigger: TGATGCAGTTTTAGGCAGCCAACTTAGAGAGGCACT...ACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATGCGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR CAA 90 bp CACCGGTTCCCTCCTGAACAAGGCTTCGAGACAAGGAGCATGAAATaGAAAAGGTCTGGAAGAGTGAGCCAATGGAATTGCACAGTCCCA +
Preference number: 2 (lower is better)
Translates to: HRFPPEQGFETRSMK*KRSGRVSQWNCTVP
Trigger: TGGGACTGTGCAATTCCATTGGCTCACTCTTCCAGACCTTTTCAATTTCATGCTCCTTGTCTCGAAGCCTTGTTCAGGAGGGAACCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CCA 90 bp TGCCTAAAACTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTCCCATGATGACTGCTaGGTTCACTCCAGTCTTTCG +
Preference number: 2 (lower is better)
Translates to: CLKLHHECCGTAAPIGQDSHDDC*VHSSLS
Trigger: CGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGA...ATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAGTTTTAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CCA 90 bp ACAATGGCCGACAGCACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTCGATGGCTATGGCAATaGCATCTACGTACACAAGGT +
Preference number: 2 (lower is better)
Translates to: TMADSTAWGNDSKRNPVARWLWQ*HLRTQG
Trigger: ACCTTGTGTACGTAGATGCCATTGCCATAGCCATCG...AGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTGCTGTCGGCCATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR-3UTR GCA 90 bp CTTCCGCATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTATCTACTTCTGCATCTaGTTTGACAACAGTTGCGTT +
Preference number: 2 (lower is better)
Translates to: LPHGLSPCSHDDCWVHSSIYFCI*FDNSCV
Trigger: AACGCAACTGTTGTCAAAGCAGATGCAGAAGTAGAT...ACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATGCGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CCA 90 bp CATCAGTTTCAGGAAGCTTTCCAAGGACTTTGTAGCTTGGACTCTGTGTTCTGTTCTATGCCTCAGGAGTaGCAGGAGTGGCATTGGGCT +
Preference number: 2 (lower is better)
Translates to: HQFQEAFQGLCSLDSVFCSMPQE*QEWHWA
Trigger: AGCCCAATGCCACTCCTGCCACTCCTGAGGCATAGA...ACAGAACACAGAGTCCAAGCTACAAAGTCCTTGGAAAGCTTCCTGAAACTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR-3UTR CCA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAATCTACGTACACAAGGTaGAAGAGGCTGGTGTCCGGA +
Preference number: 2 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKSTYTR*KRLVSG
Trigger: TCCGGACACCAGCCTCTTCCACCTTGTGTACGTAGA...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR-3UTR CCA 90 bp ACAATGGCCGACAGCACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTTCTTGGCCATGGAGATaGTCACTGAAAATCCAACGA +
Preference number: 2 (lower is better)
Translates to: TMADSTAWGNDSKRNPVASWPWR*SLKIQR
Trigger: TCGTTGGATTTTCAGTGACCATCTCCATGGCCAAGA...AGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTGCTGTCGGCCATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR CAA 90 bp AAGGAGCATGAAATTGAAAAGGTCTGGAAGAGTGAGCCAATGGAATaGCACAGTCCCAGGGCAATGAGCTCCCTAGAGGAAGTGTTCCAA +
Preference number: 2 (lower is better)
Translates to: KEHEIEKVWKSEPME*HSPRAMSSLEEVFQ
Trigger: TTGGAACACTTCCTCTAGGGAGCTCATTGCCCTGGGACTGTGCAATTCCATTGGCTCACTCTTCCAGACCTTTTCAATTTCATGCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445809.5
3UTR CAA 90 bp GCTGGAGGTAGCAGCCCTAGAGGAAGTGTTCCAACGACATCCACATaGTATGATTCTTTCAAGTTAAACCCAGCTGAAATGCCAGTTCCC +
Preference number: 2 (lower is better)
Translates to: AGGSSPRGSVPTTST*YDSFKLNPAEMPVP
Trigger: GGGAACTGGCATTTCAGCTGGGTTTAACTTGAAAGAATCATACAATGTGGATGTCGTTGGAACACTTCCTCTAGGGCTGCTACCTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR-3UTR TCA 90 bp TGCCTAAAACTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATCAAGTTAAACCCAGCTaGAATGCCAGTTCCCATTAC +
Preference number: 2 (lower is better)
Translates to: CLKLHHECCGTAAPIGQDQVKPS*NASSHY
Trigger: GTAATGGGAACTGGCATTTCAGCTGGGTTTAACTTG...ATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAGTTTTAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR TCA 90 bp CGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCAACAGAATCAACCACCGGTTCCCTCCTaGACAAGGCTTCGAGACAAG +
Preference number: 2 (lower is better)
Translates to: RLHILLQSLPEFSLQQNQPPVPS*TRLRDK
Trigger: CTTGTCTCGAAGCCTTGTTCAGGAGGGAACCGGTGG...TTGATTCTGTTGGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR TCA 90 bp CTTCCGCATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTATCCAGTTGCTAATATaGCCAGCAGAATCATTAATG +
Preference number: 2 (lower is better)
Translates to: LPHGLSPCSHDDCWVHSSIQLLI*PAESLM
Trigger: CATTAATGATTCTGCTGGTCATATTAGCAACTGGAT...ACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATGCGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CCA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAATCCCATGATGACTGCTaGGTTCACTCCAGTCTTTCG +
Preference number: 2 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKSHDDC*VHSSLS
Trigger: CGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGA...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR CAA 90 bp CAGGGCAATGAGCTCCCTAGAGGAAGTGTTCCAACGACATCCACATaGTATGATTCTTTCAAGTTAAACCCAGCTGAAATGCCAGTTCCC +
Preference number: 2 (lower is better)
Translates to: QGNELPRGSVPTTST*YDSFKLNPAEMPVP
Trigger: GGGAACTGGCATTTCAGCTGGGTTTAACTTGAAAGAATCATACAATGTGGATGTCGTTGGAACACTTCCTCTAGGGAGCTCATTGCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445809.5
3UTR-3UTR TCA 90 bp CTTTCACCTCTGTGTTCTGTAAATCACAGTCAGCAGAGCAATGATCACAGCAGTCACAGCCTGGGGCAATaGTTCAAAGAGGAATCCAGT +
Preference number: 2 (lower is better)
Translates to: LSPLCSVNHSQQSNDHSSHSLGQ*FKEESS
Trigger: ACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTG...ACTGCTGTGATCATTGCTCTGCTGACTGTGATTTACAGAACACAGAGGTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445809.5
3UTR-3UTR GCA 90 bp TTTGCATTTCCGACTTCCTTAGCGTACTTCCGCATGGCCTTTCTCCTTGCTCCCTGCTTTGACAACAGTTaGGTTGGCCATATTTGCATT +
Preference number: 2 (lower is better)
Translates to: FAFPTSLAYFRMAFLLAPCFDNS*VGHICI
Trigger: AATGCAAATATGGCCAACGCAACTGTTGTCAAAGCA...GGGAGCAAGGAGAAAGGCCATGCGGAAGTACGCTAAGGAAGTCGGAAATGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR GCA 90 bp ATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTTCACAACTTGTGCACTaGATCCTGCTAAGTATACAT +
Preference number: 2 (lower is better)
Translates to: MAFLLAPMMTAGFTPVFRSQLVH*ILLSIH
Trigger: ATGTATACTTAGCAGGATGCAGTGCACAAGTTGTGA...ACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR GCA 90 bp GCATCTGCTTTGACAACAGTTGCGTTGGCCATATTTGCATTTCCGACTTCCTTATTCCTGTTCAGCAAGTaGCTCTCTAAGTTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: ASALTTVALAIFAFPTSLFLFSK*LSKLAA
Trigger: GGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAA...TAAGGAAGTCGGAAATGCAAATATGGCCAACGCAACTGTTGTCAAAGCAGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CCA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAAGTGGACGTTATCCCCTaGGGGCATAAATCTTTGCAT +
Preference number: 2 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKVDVIP*GHKSLH
Trigger: ATGCAAAGATTTATGCCCCCAGGGGATAACGTCCAC...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR-3UTR CCA 90 bp AATGACAGTGTGGACGTTATCCCCTGGGGGCATAAATCTTTGCATTTCCTCAGGAGTGCCTCTCTAAGTTaGCTGCCTAAAACTGCATCA +
Preference number: 2 (lower is better)
Translates to: NDSVDVIPWGHKSLHFLRSASLS*LPKTAS
Trigger: TGATGCAGTTTTAGGCAGCCAACTTAGAGAGGCACT...CCTGAGGAAATGCAAAGATTTATGCCCCCAGGGGATAACGTCCACACTGTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR-3UTR TCA 90 bp ACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTAATATGACCAGCAGACAAGTTAAACCCAGCTaGAATGCCAGTTCCCATTAC +
Preference number: 2 (lower is better)
Translates to: TAWGNDSKRNPVANMTSRQVKPS*NASSHY
Trigger: GTAATGGGAACTGGCATTTCAGCTGGGTTTAACTTG...TCTGCTGGTCATATTAGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR GCA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAATGCGTTGGCCATATTTaGATTTCCGACTTCCTTAGC +
Preference number: 2 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKCVGHI*ISDFLS
Trigger: GCTAAGGAAGTCGGAAATGCAAATATGGCCAACGCA...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR TCA 90 bp AATATGACCAGCAGAATCATTAATGAGGCCAAACAACCTGCAAGCTGTGTCTTCAAAGGTCTGGAAGAGTaGGCCAATGGAATTGCACAG +
Preference number: 2 (lower is better)
Translates to: NMTSRIINEAKQPASCVFKGLEE*ANGIAQ
Trigger: CTGTGCAATTCCATTGGCTCACTCTTCCAGACCTTT...GAAGACACAGCTTGCAGGTTGTTTGGCCTCATTAATGATTCTGCTGGTCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR GCA 90 bp AGCACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTAATATGACCAGCTTCTTTTACAATCCCTaGCAGAGTTTTCACTCCAAC +
Preference number: 2 (lower is better)
Translates to: STAWGNDSKRNPVANMTSFFYNP*QSFHSN
Trigger: GTTGGAGTGAAAACTCTGGCAGGGATTGTAAAAGAA...GCTGGTCATATTAGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CCA 90 bp AATGACAGTGTGGACGTTATCCCCTGGGGGCATAAATCTTTGCATTTCCTCAGGGAAATTGAAAAGGTCTaGAAGAGTGAGCCAATGGAA +
Preference number: 2 (lower is better)
Translates to: NDSVDVIPWGHKSLHFLREIEKV*KSEPME
Trigger: TTCCATTGGCTCACTCTTCCAGACCTTTTCAATTTC...CCTGAGGAAATGCAAAGATTTATGCCCCCAGGGGATAACGTCCACACTGTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CCA 90 bp CATCAGTTTCAGGAAGCTTTCCAAGGACTTTGTAGCTTGGACTCTGTGTTCTGTATCCAACGATGGCTATaGCAATGGCATCTACGTACA +
Preference number: 2 (lower is better)
Translates to: HQFQEAFQGLCSLDSVFCIQRWL*QWHLRT
Trigger: TGTACGTAGATGCCATTGCCATAGCCATCGTTGGAT...ACAGAACACAGAGTCCAAGCTACAAAGTCCTTGGAAAGCTTCCTGAAACTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR CAA 90 bp ATCACTATTGGGGGATATTTTACTTCACCATCCTCTTCTTCAGGCTaGGTAGCATCCTCTCCATCTACTTCTGCATCTGCTTTGACAACA +
Preference number: 2 (lower is better)
Translates to: ITIGGYFTSPSSSSG*VASSPSTSASALTT
Trigger: TGTTGTCAAAGCAGATGCAGAAGTAGATGGAGAGGATGCTACCAAGCCTGAAGAAGAGGATGGTGAAGTAAAATATCCCCCAATAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR TCA 90 bp GCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTAAAAATCTATTCCGAGTaGGGTCATTCACAACTTGTG +
Preference number: 2 (lower is better)
Translates to: APMMTAGFTPVFRFNALLKIYSE*GHSQLV
Trigger: CACAAGTTGTGAATGACCTCACTCGGAATAGATTTT...TAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR TCA 90 bp CATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCAAAGGTCTGGAAGAGTaGGCCAATGGAATTGCACAG +
Preference number: 2 (lower is better)
Translates to: HIYRRLHILLQSLPEFSLKGLEE*ANGIAQ
Trigger: CTGTGCAATTCCATTGGCTCACTCTTCCAGACCTTT...GAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR TCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCACATTCCCTTCAGGTTaGCAATCACAATGGCCGACA +
Preference number: 2 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSTFPSG*QSQWPT
Trigger: TGTCGGCCATTGTGATTGTCAACCTGAAGGGAATGT...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445809.5
3UTR-3UTR GCA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAATTCTTTTACAATCCCTaGCAGAGTTTTCACTCCAAC +
Preference number: 2 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKFFYNP*QSFHSN
Trigger: GTTGGAGTGAAAACTCTGGCAGGGATTGTAAAAGAA...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR-3UTR GCA 90 bp GCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTATCACAACTTGTGCACTaGATCCTGCTAAGTATACAT +
Preference number: 2 (lower is better)
Translates to: APMMTAGFTPVFRFNALLSQLVH*ILLSIH
Trigger: ATGTATACTTAGCAGGATGCAGTGCACAAGTTGTGA...TAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CCA 90 bp GCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTAGAAATTGAAAAGGTCTaGAAGAGTGAGCCAATGGAA +
Preference number: 2 (lower is better)
Translates to: APMMTAGFTPVFRFNALLEIEKV*KSEPME
Trigger: TTCCATTGGCTCACTCTTCCAGACCTTTTCAATTTC...TAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR TCA 90 bp ACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTAATATGACCAGCAGAGACATCCACATTGTATaGTTCTTTCAAGTTAAACCC +
Preference number: 2 (lower is better)
Translates to: TAWGNDSKRNPVANMTSRDIHIV*FFQVKP
Trigger: GGGTTTAACTTGAAAGAATCATACAATGTGGATGTC...TCTGCTGGTCATATTAGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR TCA 90 bp GCATCTGCTTTGACAACAGTTGCGTTGGCCATATTTGCATTTCCGACTTCCTTAGACATCCACATTGTATaGTTCTTTCAAGTTAAACCC +
Preference number: 2 (lower is better)
Translates to: ASALTTVALAIFAFPTSLDIHIV*FFQVKP
Trigger: GGGTTTAACTTGAAAGAATCATACAATGTGGATGTC...TAAGGAAGTCGGAAATGCAAATATGGCCAACGCAACTGTTGTCAAAGCAGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR TCA 90 bp CTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTATACAAGTCGCTATTTGGAAAAAGGGGAGATCTaGGAACTGCATAAACATTCC +
Preference number: 2 (lower is better)
Translates to: LGSLQSFVLMHCYTSRYLEKGEI*ELHKHS
Trigger: GGAATGTTTATGCAGTTCTCAGATCTCCCCTTTTTC...CAAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR TCA 90 bp TGTGCACTGCATCCTGCTAAGTATACATATATACCGACGTCTCCATATTCTTTTCATGGAGATGGTCACTaGAAATCCAACGATGGCTAT +
Preference number: 2 (lower is better)
Translates to: CALHPAKYTYIPTSPYSFHGDGH*KSNDGY
Trigger: ATAGCCATCGTTGGATTTTCAGTGACCATCTCCATG...AAAAGAATATGGAGACGTCGGTATATATGTATACTTAGCAGGATGCAGTGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR-3UTR GCA 90 bp CTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTATACAAGTCGCTATTTGGGGGGCATAAATCTTTaGATTTCCTCAGGAAATGTG +
Preference number: 2 (lower is better)
Translates to: LGSLQSFVLMHCYTSRYLGGINL*ISSGNV
Trigger: CACATTTCCTGAGGAAATGCAAAGATTTATGCCCCC...CAAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CCA 90 bp CCTCATATGCGTCTATATCAATATACACATCAGTTTCAGGAAGCTTTCCAAGGATATTTGCTAAGGTCTTaGCCATGGAGATGGTCACTG +
Preference number: 2 (lower is better)
Translates to: PHMRLYQYTHQFQEAFQGYLLRS*PWRWSL
Trigger: CAGTGACCATCTCCATGGCCAAGACCTTAGCAAATA...TCCTTGGAAAGCTTCCTGAAACTGATGTGTATATTGATATAGACGCATATGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR CCA 72 bp GGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTaGGAAGGGGGAGCCGAGGCTTCCTGTTCAGCAAGT +
Preference number: 3 (lower is better)
Translates to: GVAGVALGSKSS*EGGAEASCSAS
Trigger: ACTTGCTGAACAGGAAGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR CCA 72 bp TCCTCATCTATGCCTCAGGAGTGGCAGGAGTGGCATTaGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGG +
Preference number: 3 (lower is better)
Translates to: SSSMPQEWQEWH*APSPPGKGEPR
Trigger: CCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCCTGAGGCATAGATGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR CCA 72 bp TGGCAATGGCATCTACGTACACAAGGTGGAAGAGGCTaGTGTCCGGATTGGCTGGAGGTAGCAGCCCTAGAG +
Preference number: 3 (lower is better)
Translates to: WQWHLRTQGGRG*CPDWLEVAALE
Trigger: CTCTAGGGCTGCTACCTCCAGCCAATCCGGACACCAGCCTCTTCCACCTTGTGTACGTAGATGCCATTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR-3UTR CAA 90 bp CTGGGAAGGGGGAGCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTACTTCTGCATCTGCTTaGACAACAGTTGCGTTGGCC +
Preference number: 3 (lower is better)
Translates to: LGRGSRGFLFSKCLSKLATSASA*TTVALA
Trigger: GGCCAACGCAACTGTTGTCAAAGCAGATGCAGAAGT...AGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGCTCCCCCTTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR TCA 72 bp CTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTaGACTGCTTGGATTACACGGCATTTCCCCTACGGT +
Preference number: 3 (lower is better)
Translates to: LAFKPCPPGPKA*TAWITRHFPYG
Trigger: ACCGTAGGGGAAATGCCGTGTAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339444.10
3UTR CCA 72 bp CTACGTACACAAGGTGGAAGAGGCTGGTGTCCGGATTaGCTGGAGGTAGCAGCCCTAGAGGAAGTGTTCCAA +
Preference number: 3 (lower is better)
Translates to: LRTQGGRGWCPD*LEVAALEEVFQ
Trigger: TTGGAACACTTCCTCTAGGGCTGCTACCTCCAGCCAATCCGGACACCAGCCTCTTCCACCTTGTGTACGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR CCA 72 bp ACGATGGCTATGGCAATGGCATCTACGTACACAAGGTaGAAGAGGCTGGTGTCCGGATTGGCTGGAGGTAGC +
Preference number: 3 (lower is better)
Translates to: TMAMAMASTYTR*KRLVSGLAGGS
Trigger: GCTACCTCCAGCCAATCCGGACACCAGCCTCTTCCACCTTGTGTACGTAGATGCCATTGCCATAGCCATCGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR-3UTR CAA 90 bp CCCCATCCTAGGGTGAGGTCCTCATCTATGCCTCAGGAGTGGCAGGAGTGGCATCAAGTACAATACATCTaGCTAGGCGTCATTCACCCT +
Preference number: 3 (lower is better)
Translates to: PHPRVRSSSMPQEWQEWHQVQYI*LGVIHP
Trigger: AGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG...ATGCCACTCCTGCCACTCCTGAGGCATAGATGAGGACCTCACCCTAGGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000454864.5
3UTR-3UTR CAA 90 bp TACACAAGGTGGAAGAGGCTGGTGTCCGGATTGGCTGGAGGTAGCAGCCCTAGACTCTCATTAAACTCCTaGCCACCCAACAGCAAACCA +
Preference number: 3 (lower is better)
Translates to: YTRWKRLVSGLAGGSSPRLSLNS*PPNSKP
Trigger: TGGTTTGCTGTTGGGTGGCAAGGAGTTTAATGAGAG...TCTAGGGCTGCTACCTCCAGCCAATCCGGACACCAGCCTCTTCCACCTTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR GCA 72 bp GACTTCCTTAGCGTACTTCCGCATGGCCTTTCTCCTTaGTCCCATGATGACTGCTGGGTTCACTCCAGTCTT +
Preference number: 3 (lower is better)
Translates to: DFLSVLPHGLSP*SHDDCWVHSSL
Trigger: AAGACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATGCGGAAGTACGCTAAGGAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CAA 90 bp GCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTGCCTAAAACTGCAACTTCTGCATCTGCTTaGACAACAGTTGCGTTGGCC +
Preference number: 3 (lower is better)
Translates to: AEASCSASASLSWLPKTATSASA*TTVALA
Trigger: GGCCAACGCAACTGTTGTCAAAGCAGATGCAGAAGT...TGCAGTTTTAGGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR TCA 72 bp AGTGCCTCTCTAAGTTGGCTGCCTAAAACTGCATCATaGATGCTGTGGAACAGCAGCTCCCATAGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: SASLSWLPKTAS*MLWNSSSHRAG
Trigger: TCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAGTTTTAGGCAGCCAACTTAGAGAGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR TCA 72 bp CAACCTGCAAGCTGTGTCTTCCCACCGGTTCCCTCCTaGACAAGGCTTCGAGACAAGGAGCATGAAATTGAA +
Preference number: 3 (lower is better)
Translates to: QPASCVFPPVPS*TRLRDKEHEIE
Trigger: TTCAATTTCATGCTCCTTGTCTCGAAGCCTTGTTCAGGAGGGAACCGGTGGGAAGACACAGCTTGCAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CAA 90 bp GCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTGCCTAAAACTGCATTGACAACAGTTGCGTaGGCCATATTTGCATTTCCG +
Preference number: 3 (lower is better)
Translates to: AEASCSASASLSWLPKTALTTVA*AIFAFP
Trigger: CGGAAATGCAAATATGGCCAACGCAACTGTTGTCAA...TGCAGTTTTAGGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR CCA 72 bp CCATGGAGATGGTCACTGAAAATCCAACGATGGCTATaGCAATGGCATCTACGTACACAAGGTGGAAGAGGC +
Preference number: 3 (lower is better)
Translates to: PWRWSLKIQRWL*QWHLRTQGGRG
Trigger: GCCTCTTCCACCTTGTGTACGTAGATGCCATTGCCATAGCCATCGTTGGATTTTCAGTGACCATCTCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR GCA 72 bp TGCATCTGCTTTGACAACAGTTGCGTTGGCCATATTTaGATTTCCGACTTCCTTAGCGTACTTCCGCATGGC +
Preference number: 3 (lower is better)
Translates to: CICFDNSCVGHI*ISDFLSVLPHG
Trigger: GCCATGCGGAAGTACGCTAAGGAAGTCGGAAATGCAAATATGGCCAACGCAACTGTTGTCAAAGCAGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR CCA 72 bp AGATGGTCACTGAAAATCCAACGATGGCTATGGCAATaGCATCTACGTACACAAGGTGGAAGAGGCTGGTGT +
Preference number: 3 (lower is better)
Translates to: RWSLKIQRWLWQ*HLRTQGGRGWC
Trigger: ACACCAGCCTCTTCCACCTTGTGTACGTAGATGCCATTGCCATAGCCATCGTTGGATTTTCAGTGACCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR CCA 72 bp TCTTGGCCATGGAGATGGTCACTGAAAATCCAACGATaGCTATGGCAATGGCATCTACGTACACAAGGTGGA +
Preference number: 3 (lower is better)
Translates to: SWPWRWSLKIQR*LWQWHLRTQGG
Trigger: TCCACCTTGTGTACGTAGATGCCATTGCCATAGCCATCGTTGGATTTTCAGTGACCATCTCCATGGCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR-3UTR CAA 90 bp CAAAGTTCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCCAAAGCCTGAACTGCTaGGATTACACGGCATTTCCC +
Preference number: 3 (lower is better)
Translates to: QSSEVLSDLAEVTPLTDSQSLNC*DYTAFP
Trigger: GGGAAATGCCGTGTAATCCAAGCAGTTCAGGCTTTG...GGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGAACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
3UTR-3UTR CAA 90 bp GATCAAACCATAGTCCAATCCCAGGAACAAGGAGGACACAAAAGTGGTAAGCCAACTTCTGCATCTGCTTaGACAACAGTTGCGTTGGCC +
Preference number: 3 (lower is better)
Translates to: DQTIVQSQEQGGHKSGKPTSASA*TTVALA
Trigger: GGCCAACGCAACTGTTGTCAAAGCAGATGCAGAAGT...TGGCTTACCACTTTTGTGTCCTCCTTGTTCCTGGGATTGGACTATGGTTTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CAA 90 bp GATCAAACCATAGTCCAATCCCAGGAACAAGGAGGACACAAAAGTGGTAAGCCAGGTAGCCATGTTTATTaGCTAAGGTCTTGGCCATGG +
Preference number: 3 (lower is better)
Translates to: DQTIVQSQEQGGHKSGKPGSHVY*LRSWPW
Trigger: CCATGGCCAAGACCTTAGCAAATAAACATGGCTACC...TGGCTTACCACTTTTGTGTCCTCCTTGTTCCTGGGATTGGACTATGGTTTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR CCA 72 bp CCTGGTAGCCATGTTTATTTGCTAAGGTCTTGGCCATaGAGATGGTCACTGAAAATCCAACGATGGCTATGG +
Preference number: 3 (lower is better)
Translates to: PGSHVYLLRSWP*RWSLKIQRWLW
Trigger: CCATAGCCATCGTTGGATTTTCAGTGACCATCTCCATGGCCAAGACCTTAGCAAATAAACATGGCTACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR CCA 72 bp CGTCAACCTGGTAGCCATGTTTATTTGCTAAGGTCTTaGCCATGGAGATGGTCACTGAAAATCCAACGATGG +
Preference number: 3 (lower is better)
Translates to: RQPGSHVYLLRS*PWRWSLKIQRW
Trigger: CCATCGTTGGATTTTCAGTGACCATCTCCATGGCCAAGACCTTAGCAAATAAACATGGCTACCAGGTTGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR-3UTR CAA 90 bp GCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTACAAGTACAATACATCTaGCTAGGCGTCATTCACCCT +
Preference number: 3 (lower is better)
Translates to: APMMTAGFTPVFRFNALLQVQYI*LGVIHP
Trigger: AGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG...TAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445809.5
3UTR-3UTR CAA 90 bp AATGACAGTGTGGACGTTATCCCCTGGGGGCATAAATCTTTGCATTTCCTCAGGTGGGGGCATAAATCTTaGCATTTCCTCAGGAAATGT +
Preference number: 3 (lower is better)
Translates to: NDSVDVIPWGHKSLHFLRWGHKS*HFLRKC
Trigger: ACATTTCCTGAGGAAATGCAAAGATTTATGCCCCCA...CCTGAGGAAATGCAAAGATTTATGCCCCCAGGGGATAACGTCCACACTGTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
3UTR-3UTR CAA 90 bp GATCAAACCATAGTCCAATCCCAGGAACAAGGAGGACACAAAAGTGGTAAGCCATTATTTGCTAAGGTCTaGGCCATGGAGATGGTCACT +
Preference number: 3 (lower is better)
Translates to: DQTIVQSQEQGGHKSGKPLFAKV*AMEMVT
Trigger: AGTGACCATCTCCATGGCCAAGACCTTAGCAAATAA...TGGCTTACCACTTTTGTGTCCTCCTTGTTCCTGGGATTGGACTATGGTTTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
3UTR-3UTR CAA 90 bp GTGAGGTCATTCACAACTTGTGCACTGCATCCTGCTAAGTATACATATATACCGTTGACAACAGTTGCGTaGGCCATATTTGCATTTCCG +
Preference number: 3 (lower is better)
Translates to: VRSFTTCALHPAKYTYIPLTTVA*AIFAFP
Trigger: CGGAAATGCAAATATGGCCAACGCAACTGTTGTCAA...CGGTATATATGTATACTTAGCAGGATGCAGTGCACAAGTTGTGAATGACCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CAA 90 bp GCATCTGCTTTGACAACAGTTGCGTTGGCCATATTTGCATTTCCGACTTCCTTATGGGGGCATAAATCTTaGCATTTCCTCAGGAAATGT +
Preference number: 3 (lower is better)
Translates to: ASALTTVALAIFAFPTSLWGHKS*HFLRKC
Trigger: ACATTTCCTGAGGAAATGCAAAGATTTATGCCCCCA...TAAGGAAGTCGGAAATGCAAATATGGCCAACGCAACTGTTGTCAAAGCAGATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CAA 90 bp ATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCCTCTCATTAAACTCCTaGCCACCCAACAGCAAACCA +
Preference number: 3 (lower is better)
Translates to: IYTDVSIFFYNPCQSFHSLSLNS*PPNSKP
Trigger: TGGTTTGCTGTTGGGTGGCAAGGAGTTTAATGAGAG...GGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCAACATTCCCTTCAGGTaGACAATCACAATGGCCGAC +
Preference number: 3 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSNIPFR*TITMAD
Trigger: GTCGGCCATTGTGATTGTCAACCTGAAGGGAATGTT...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445809.5
3UTR TCA 72 bp GGGGCAATGATTCAAAGAGGAATCCAGTTGCTAATATaGCCAGCAGAATCATTAATGAGGCCAAACAACCTG +
Preference number: 3 (lower is better)
Translates to: GAMIQRGIQLLI*PAESLMRPNNL
Trigger: CAGGTTGTTTGGCCTCATTAATGATTCTGCTGGTCATATTAGCAACTGGATTCCTCTTTGAATCATTGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR GCA 72 bp TTGCTGGTTCTCCAGAAAAAGGGGAGATCTGAGAACTaGATAAACATTCCCTTCAGGTTGACAATCACAATG +
Preference number: 3 (lower is better)
Translates to: LLVLQKKGRSEN*INIPFRLTITM
Trigger: CATTGTGATTGTCAACCTGAAGGGAATGTTTATGCAGTTCTCAGATCTCCCCTTTTTCTGGAGAACCAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CAA 90 bp CTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTATACAAGTCGCTATTTGATGGTCAGCTCTATTTaGCTGGTTCTCCAGAAAAAG +
Preference number: 3 (lower is better)
Translates to: LGSLQSFVLMHCYTSRYLMVSSI*LVLQKK
Trigger: CTTTTTCTGGAGAACCAGCAAAATAGAGCTGACCAT...CAAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR GCA 72 bp CTGCTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTaGTATACAAGTCGCTATTTGCATAGTAAATTGGTG +
Preference number: 3 (lower is better)
Translates to: LLGSLQSFVLMH*YTSRYLHSKLV
Trigger: CACCAATTTACTATGCAAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR-3UTR CAA 90 bp ATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCCCAACGACATCCACATaGTATGATTCTTTCAAGTTA +
Preference number: 3 (lower is better)
Translates to: IYTDVSIFFYNPCQSFHSPTTST*YDSFKL
Trigger: TAACTTGAAAGAATCATACAATGTGGATGTCGTTGG...GGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
3UTR GCA 72 bp CTCCATCTACTTCTGCATCCTTTCGTTTTAATGCATTaGTATACAAGTCGCTATTTGCATAGTAAATTGGTG +
Preference number: 3 (lower is better)
Translates to: LHLLLHPFVLMH*YTSRYLHSKLV
Trigger: CACCAATTTACTATGCAAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGGATGCAGAAGTAGATGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454864.5
CDS-3UTR CCA 90 bp GGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGGCTGGTGTCCGGATTaGCTGGAGGTAGCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: GVAGVALGSKSSWEGGAEGWCPD*LEVAAL
Trigger: TAGGGCTGCTACCTCCAGCCAATCCGGACACCAGCC...CTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp GAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGGGCTGGTGTCCGGATTaGCTGGAGGTAGCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: EWQEWHWAPSPPGKGEPRGWCPD*LEVAAL
Trigger: TAGGGCTGCTACCTCCAGCCAATCCGGACACCAGCC...CCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp GTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTCCACCGGTTCCCTCCTaGACAAGGCTTCGAGACAAG +
Preference number: 4 (lower is better)
Translates to: VAGVALGSKSSWEGGAEAPPVPS*TRLRDK
Trigger: CTTGTCTCGAAGCCTTGTTCAGGAGGGAACCGGTGG...AGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp GAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGGACATGCACAGCTGCTaGGGTGGTAAACCCACGGAC +
Preference number: 4 (lower is better)
Translates to: EWQEWHWAPSPPGKGEPRDMHSC*GGKPTD
Trigger: GTCCGTGGGTTTACCACCGCAGCAGCTGTGCATGTC...CCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp GGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCGGAGAGCTCGCTCCTTaGCCCAGCCCGGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GHPTNRFQSWHSNPVHLAGELAP*PSPGCP
Trigger: AGGGCAGCCCGGGCTGGGCCAAGGAGCGAGCTCTCC...GGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCCCCTGTGCTTATGCCTaGGACCAAGTCACCCAACAC +
Preference number: 4 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGPCAYA*DQVTQH
Trigger: GTGTTGGGTGACTTGGTCTCAGGCATAAGCACAGGG...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp GTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTAACCCCATCCTAGGGTaGGGTCCTCATCTATGCCTC +
Preference number: 4 (lower is better)
Translates to: VAGVALGSKSSWEGGAEANPILG*GPHLCL
Trigger: GAGGCATAGATGAGGACCTCACCCTAGGATGGGGTT...AGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp AGGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGACATGCACAGCTGCTaGGGTGGTAAACCCACGGAC +
Preference number: 4 (lower is better)
Translates to: RSGRSGIGLQVLLGRGSRDMHSC*GGKPTD
Trigger: GTCCGTGGGTTTACCACCGCAGCAGCTGTGCATGTC...TCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCATGGAGGTGAAGACATaGACAGCTGCTGCGGTGGTA +
Preference number: 4 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGMEVKT*TAAAVV
Trigger: TACCACCGCAGCAGCTGTGCATGTCTTCACCTCCAT...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp AGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGGATTAGGAGAGCTCGCTCCTTaGCCCAGCCCGGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SWHSNPVHLAPKPELLGLGELAP*PSPGCP
Trigger: AGGGCAGCCCGGGCTGGGCCAAGGAGCGAGCTCTCC...TAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp GAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGGGAAGAGTGAGCCAATaGAATTGCACAGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: EWQEWHWAPSPPGKGEPRGRVSQ*NCTVPG
Trigger: CCCTGGGACTGTGCAATTCCATTGGCTCACTCTTCC...CCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp GTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTGTACAGGCCAAATATTaGAGGCACAGCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: VAGVALGSKSSWEGGAEAVQAKY*RHSCQH
Trigger: ATGCTGGCAGCTGTGCCTCCAATATTTGGCCTGTAC...AGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp CACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAGGCTGGTGTCCGGATTaGCTGGAGGTAGCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: HPTNRFQSWHSNPVHLAPGWCPD*LEVAAL
Trigger: TAGGGCTGCTACCTCCAGCCAATCCGGACACCAGCC...TGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR TCA 90 bp AGGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGAGACAAGCATTTCCTaGGTGTCACCAGATCCAATG +
Preference number: 4 (lower is better)
Translates to: RSGRSGIGLQVLLGRGSRETSIS*VSPDPM
Trigger: CATTGGATCTGGTGACACTCAGGAAATGCTTGTCTC...TCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp GATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCCCTGGCCCCAAAGCCTaGACTGCTTGGATTACACGG +
Preference number: 4 (lower is better)
Translates to: DSRAGIQTLSTWPQSLNCPGPKA*TAWITR
Trigger: CCGTGTAATCCAAGCAGTTCAGGCTTTGGGGCCAGG...GCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp GTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTAGGAGTACATGTGAATaGCTGTTTCAGCTTATCCGC +
Preference number: 4 (lower is better)
Translates to: VAGVALGSKSSWEGGAEARSTCE*LFQLIR
Trigger: GCGGATAAGCTGAAACAGGCATTCACATGTACTCCT...AGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp CACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAGACATGCACAGCTGCTaGGGTGGTAAACCCACGGAC +
Preference number: 4 (lower is better)
Translates to: HPTNRFQSWHSNPVHLAPDMHSC*GGKPTD
Trigger: GTCCGTGGGTTTACCACCGCAGCAGCTGTGCATGTC...TGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp GGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCGACATGCACAGCTGCTaGGGTGGTAAACCCACGGAC +
Preference number: 4 (lower is better)
Translates to: GHPTNRFQSWHSNPVHLADMHSC*GGKPTD
Trigger: GTCCGTGGGTTTACCACCGCAGCAGCTGTGCATGTC...GGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTGCGTTGGCCATATTTaGATTTCCGACTTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGCVGHI*ISDFLS
Trigger: GCTAAGGAAGTCGGAAATGCAAATATGGCCAACGCA...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp AGGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAAAACTGCATCATGAATaGTGTGGAACAGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RSGRSGIGLQVLLGRGSRKLHHE*CGTAAP
Trigger: GGGAGCTGCTGTTCCACAGCATTCATGATGCAGTTT...TCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp TCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCAGAGCTGGAGAGCTCGCTCCTTaGCCCAGCCCGGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SEVLSDLAEVTPLTDSRAGELAP*PSPGCP
Trigger: AGGGCAGCCCGGGCTGGGCCAAGGAGCGAGCTCTCC...AGCTCTGGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp GGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCGACAAGATCCCCCGCTaGGAGCTCCAGTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: GHPTNRFQSWHSNPVHLADKIPR*ELQCSS
Trigger: TGAACTGCACTGGAGCTCCCAGCGGGGGATCTTGTC...GGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp TACACAAGGTGGAAGAGGCTGGTGTCCGGATTGGCTGGAGGTAGCAGCCCTAGAGACAAGATCCCCCGCTaGGAGCTCCAGTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: YTRWKRLVSGLAGGSSPRDKIPR*ELQCSS
Trigger: TGAACTGCACTGGAGCTCCCAGCGGGGGATCTTGTC...TCTAGGGCTGCTACCTCCAGCCAATCCGGACACCAGCCTCTTCCACCTTGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR CCA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGGGCTGGTGTCCGGATTaGCTGGAGGTAGCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWGWCPD*LEVAAL
Trigger: TAGGGCTGCTACCTCCAGCCAATCCGGACACCAGCC...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp GGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGATCCAACGATGGCTATaGCAATGGCATCTACGTACA +
Preference number: 4 (lower is better)
Translates to: GVAGVALGSKSSWEGGAEIQRWL*QWHLRT
Trigger: TGTACGTAGATGCCATTGCCATAGCCATCGTTGGAT...CTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTATTTGCTAAGGTCTTaGCCATGGAGATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGYLLRS*PWRWSL
Trigger: CAGTGACCATCTCCATGGCCAAGACCTTAGCAAATA...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCAGTGCCTCTCTAAGTTaGCTGCCTAAAACTGCATCA +
Preference number: 4 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGSASLS*LPKTAS
Trigger: TGATGCAGTTTTAGGCAGCCAACTTAGAGAGGCACT...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp TTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTCCACCGGTTCCCTCCTaGACAAGGCTTCGAGACAAG +
Preference number: 4 (lower is better)
Translates to: FQSWHSNPVHLAPKPELLPPVPS*TRLRDK
Trigger: CTTGTCTCGAAGCCTTGTTCAGGAGGGAACCGGTGG...AAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR TCA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCTGGCCCCAAAGCCTaGACTGCTTGGATTACACGG +
Preference number: 4 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWPGPKA*TAWITR
Trigger: CCGTGTAATCCAAGCAGTTCAGGCTTTGGGGCCAGG...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCGCGCTGCCTCCAGGTaGGGCTCTAGGAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWRAASR*GSRRRR
Trigger: GCGCCTCCTCCTAGAGCCGCACCTGGAGGCAGCGCG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306312.8
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGCGCTCCACAGCCGCTaGCTCTTCGACGCGCGCGCT +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWALHSR*LFDARA
Trigger: AGCGCGCGCGTCGAAGAGGCAGCGGCTGTGGAGCGC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000432958.6
CDS-3UTR GCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACGCGCTCCACAGCCGCTaGCTCTTCGACGCGCGCGCT +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYALHSR*LFDARA
Trigger: AGCGCGCGCGTCGAAGAGGCAGCGGCTGTGGAGCGC...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000432958.6
CDS-3UTR GCA 90 bp CTGGGAAGGGGGAGCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTCATGGCCTTTCTCCTTaGTCCCATGATGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: LGRGSRGFLFSKCLSKLAHGLSP*SHDDCW
Trigger: CCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATG...AGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGCTCCCCCTTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGGAGAGCTCGCTCCTTaGCCCAGCCCGGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWGELAP*PSPGCP
Trigger: AGGGCAGCCCGGGCTGGGCCAAGGAGCGAGCTCTCC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000432958.6
CDS-3UTR CCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTGGAGAGCTCGCTCCTTaGCCCAGCCCGGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTGELAP*PSPGCP
Trigger: AGGGCAGCCCGGGCTGGGCCAAGGAGCGAGCTCTCC...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000432958.6
CDS-3UTR CCA 90 bp ACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAGACAAGATCCCCCGCTaGGAGCTCCAGTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: TPLTDSRAGIQTLSTWPQDKIPR*ELQCSS
Trigger: TGAACTGCACTGGAGCTCCCAGCGGGGGATCTTGTC...TTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp AGGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGACAGCAAAAGGACCTATaGATATGTGTCTGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: RSGRSGIGLQVLLGRGSRQQKDL*ICVWRF
Trigger: GAACCTCCAGACACATATCCATAGGTCCTTTTGCTG...TCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCAAGGTGGAAGAGGCTaGTGTCCGGATTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWQGGRG*CPDWLE
Trigger: CTCCAGCCAATCCGGACACCAGCCTCTTCCACCTTG...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp GCTGAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCCAAGGTGGAAGAGGCTaGTGTCCGGATTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AEVTPLTDSRAGIQTLSTQGGRG*CPDWLE
Trigger: CTCCAGCCAATCCGGACACCAGCCTCTTCCACCTTG...GGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp CTGGGAAGGGGGAGCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTTCTACGTACACAAGGTaGAAGAGGCTGGTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: LGRGSRGFLFSKCLSKLASTYTR*KRLVSG
Trigger: TCCGGACACCAGCCTCTTCCACCTTGTGTACGTAGA...AGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGCTCCCCCTTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp TACTTCCGCATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCATGGCAGGAGTGGCATTaGGCTCCAAGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: YFRMAFLLAPMMTAGFTPWQEWH*APSPPG
Trigger: CCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCA...TGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATGCGGAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCAAACCCTGTCCACCTaGCCCCAAAGCCTGAACTGC +
Preference number: 4 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSQTLST*PQSLNC
Trigger: GCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTG...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp TTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTCAAACCCTGTCCACCTaGCCCCAAAGCCTGAACTGC +
Preference number: 4 (lower is better)
Translates to: FQSWHSNPVHLAPKPELLQTLST*PQSLNC
Trigger: GCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTG...AAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp GGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCTCCTGGAGGACCGGATaGCTAAAGATAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GHPTNRFQSWHSNPVHLASWRTG*LKIGLS
Trigger: GGAAAGGCCTATCTTTAGTCATCCGGTCCTCCAGGA...GGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp TACACAAGGTGGAAGAGGCTGGTGTCCGGATTGGCTGGAGGTAGCAGCCCTAGATCCTGGAGGACCGGATaGCTAAAGATAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: YTRWKRLVSGLAGGSSPRSWRTG*LKIGLS
Trigger: GGAAAGGCCTATCTTTAGTCATCCGGTCCTCCAGGA...TCTAGGGCTGCTACCTCCAGCCAATCCGGACACCAGCCTCTTCCACCTTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR TCA 90 bp TTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTCCCTGTGCTTATGCCTaGGACCAAGTCACCCAACAC +
Preference number: 4 (lower is better)
Translates to: FQSWHSNPVHLAPKPELLPCAYA*DQVTQH
Trigger: GTGTTGGGTGACTTGGTCTCAGGCATAAGCACAGGG...AAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp GAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTAGGCAAAACTGAATaGTTCCTGAAAGTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: EWQEWHWAPSPPGKGEPRLGKTE*FLKVRS
Trigger: TGACCTTACTTTCAGGAATCATTCAGTTTTGCCTAG...CCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCCTAGGCAAAACTGAATaGTTCCTGAAAGTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGLGKTE*FLKVRS
Trigger: TGACCTTACTTTCAGGAATCATTCAGTTTTGCCTAG...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp GGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGACACCTAGGCAAAACTaGATGATTCCTGAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: GVAGVALGSKSSWEGGAETPRQN*MIPESK
Trigger: CTTACTTTCAGGAATCATTCAGTTTTGCCTAGGTGT...CTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCACACCTAGGCAAAACTaGATGATTCCTGAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGTPRQN*MIPESK
Trigger: CTTACTTTCAGGAATCATTCAGTTTTGCCTAGGTGT...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGACAGTCCCAGGGCAATaGGCTCCTGATTGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWTVPGQ*APDCRQ
Trigger: TTGACGGCAATCAGGAGCTCATTGCCCTGGGACTGT...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR GCA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCATAGTACCTCTGGGTTaGTGCAAGGATTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGIVPLG*CKDFIF
Trigger: GAAAATGAAATCCTTGCAGCAACCCAGAGGTACTAT...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGGCACCCCTGTGCTTATaGCTGAGACCAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWAPLCL*LRPSHP
Trigger: TGGGTGACTTGGTCTCAGGCATAAGCACAGGGGTGC...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp GGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCGCTGAAGCACCCCTGTaGTTATGCCTGAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: GHPTNRFQSWHSNPVHLAAEAPL*LCLRPS
Trigger: ACTTGGTCTCAGGCATAAGCACAGGGGTGCTTCAGC...GGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp GCTGAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCGAAGACATGCACAGCTaGTGCGGTGGTAAACCCACG +
Preference number: 4 (lower is better)
Translates to: AEVTPLTDSRAGIQTLSTEDMHS*CGGKPT
Trigger: CGTGGGTTTACCACCGCAGCAGCTGTGCATGTCTTC...GGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCGAAGACATGCACAGCTaGTGCGGTGGTAAACCCACG +
Preference number: 4 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSEDMHS*CGGKPT
Trigger: CGTGGGTTTACCACCGCAGCAGCTGTGCATGTCTTC...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTGCTTTGACAACAGTTaGGTTGGCCATATTTGCATT +
Preference number: 4 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGCFDNS*VGHICI
Trigger: AATGCAAATATGGCCAACGCAACTGTTGTCAAAGCA...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp CCCCATCCTAGGGTGAGGTCCTCATCTATGCCTCAGGAGTGGCAGGAGTGGCATTTCCTGTTCAGCAAGTaGCTCTCTAAGTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PHPRVRSSSMPQEWQEWHFLFSK*LSKLAA
Trigger: GGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAA...ATGCCACTCCTGCCACTCCTGAGGCATAGATGAGGACCTCACCCTAGGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGACAAGATCCCCCGCTaGGAGCTCCAGTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPDKIPR*ELQCSS
Trigger: TGAACTGCACTGGAGCTCCCAGCGGGGGATCTTGTC...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp GTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTCTTGAATTTGTATGCTaGCAGCCATTTAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: VAGVALGSKSSWEGGAEALEFVC*QPFSYG
Trigger: CCCATAACTAAATGGCTGCCAGCATACAAATTCAAG...AGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTGCATTTACTCCTCCTaGAATGACTATATCATCTGG +
Preference number: 4 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGCIYSS*NDYIIW
Trigger: CCAGATGATATAGTCATTCCAGGAGGAGTAAATGCA...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp CTGGGAAGGGGGAGCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTTGGCCTCTGTGCCATTaGTTGCATTTACTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LGRGSRGFLFSKCLSKLAWPLCH*LHLLLL
Trigger: CAGGAGGAGTAAATGCAACCAATGGCACAGAGGCCA...AGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGCTCCCCCTTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp GGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCTCTCAAGGCATCTCTaGCCTCTGTGCCATTGGTTG +
Preference number: 4 (lower is better)
Translates to: GHPTNRFQSWHSNPVHLALSRHL*PLCHWL
Trigger: CAACCAATGGCACAGAGGCCAGAGATGCCTTGAGAG...GGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp CTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGGCCGACAGCACAGCCTaGGGCAATGATTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LTDSRAGIQTLSTWPQSLADSTA*GNDSKR
Trigger: CCTCTTTGAATCATTGCCCCAGGCTGTGCTGTCGGC...CAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp CCCCATCCTAGGGTGAGGTCCTCATCTATGCCTCAGGAGTGGCAGGAGTGGCATTCCCATGATGACTGCTaGGTTCACTCCAGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: PHPRVRSSSMPQEWQEWHSHDDC*VHSSLS
Trigger: CGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGA...ATGCCACTCCTGCCACTCCTGAGGCATAGATGAGGACCTCACCCTAGGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGGCTCCAAGTCCTCCTaGGAAGGGGGAGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPGSKSS*EGGAEA
Trigger: AGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
3UTR CAA 72 bp CAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTaGGATTACACGGCATTTCCCCTACGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: QTLSTWPQSLNC*DYTAFPLRSPS
Trigger: AGATGGAGACCGTAGGGGAAATGCCGTGTAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339444.10
CDS-3UTR TCA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGTCCTGGAGGACCGGATaGCTAAAGATAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWSWRTG*LKIGLS
Trigger: GGAAAGGCCTATCTTTAGTCATCCGGTCCTCCAGGA...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTCCCTGTGCTTATGCCTaGGACCAAGTCACCCAACAC +
Preference number: 4 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPPCAYA*DQVTQH
Trigger: GTGTTGGGTGACTTGGTCTCAGGCATAAGCACAGGG...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp GTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTGATAACAGGGTAAAATaGAGAGTACAGGCCAAATAT +
Preference number: 4 (lower is better)
Translates to: VAGVALGSKSSWEGGAEADNRVK*RVQAKY
Trigger: ATATTTGGCCTGTACTCTTCATTTTACCCTGTTATC...AGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCGATAACAGGGTAAAATaGAGAGTACAGGCCAAATAT +
Preference number: 4 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGDNRVK*RVQAKY
Trigger: ATATTTGGCCTGTACTCTTCATTTTACCCTGTTATC...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp GCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTGCCTAAAACTGCAACAGTCCCAGGGCAATaGGCTCCTGATTGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: AEASCSASASLSWLPKTATVPGQ*APDCRQ
Trigger: TTGACGGCAATCAGGAGCTCATTGCCCTGGGACTGT...TGCAGTTTTAGGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp CTGGGAAGGGGGAGCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTAAAGGTCTGGAAGAGTaGGCCAATGGAATTGCACAG +
Preference number: 4 (lower is better)
Translates to: LGRGSRGFLFSKCLSKLAKGLEE*ANGIAQ
Trigger: CTGTGCAATTCCATTGGCTCACTCTTCCAGACCTTT...AGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGCTCCCCCTTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp GTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTATCCAGTTGCTAATATaGCCAGCAGAATCATTAATG +
Preference number: 4 (lower is better)
Translates to: VAGVALGSKSSWEGGAEAIQLLI*PAESLM
Trigger: CATTAATGATTCTGCTGGTCATATTAGCAACTGGAT...AGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR TCA 90 bp AGGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAAAAATCTATTCCGAGTaGGGTCATTCACAACTTGTG +
Preference number: 4 (lower is better)
Translates to: RSGRSGIGLQVLLGRGSRKIYSE*GHSQLV
Trigger: CACAAGTTGTGAATGACCTCACTCGGAATAGATTTT...TCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGCACCCCTGTGCTTATaGCTGAGACCAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPAPLCL*LRPSHP
Trigger: TGGGTGACTTGGTCTCAGGCATAAGCACAGGGGTGC...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp GCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTGCCTAAAACTGCAGCACCCCTGTGCTTATaGCTGAGACCAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: AEASCSASASLSWLPKTAAPLCL*LRPSHP
Trigger: TGGGTGACTTGGTCTCAGGCATAAGCACAGGGGTGC...TGCAGTTTTAGGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCGCTGAAGCACCCCTGTaGTTATGCCTGAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSAEAPL*LCLRPS
Trigger: ACTTGGTCTCAGGCATAAGCACAGGGGTGCTTCAGC...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp AGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGGATTAGAAGACATGCACAGCTaGTGCGGTGGTAAACCCACG +
Preference number: 4 (lower is better)
Translates to: SWHSNPVHLAPKPELLGLEDMHS*CGGKPT
Trigger: CGTGGGTTTACCACCGCAGCAGCTGTGCATGTCTTC...TAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp GCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTGCCTAAAACTGCAGAAGACATGCACAGCTaGTGCGGTGGTAAACCCACG +
Preference number: 4 (lower is better)
Translates to: AEASCSASASLSWLPKTAEDMHS*CGGKPT
Trigger: CGTGGGTTTACCACCGCAGCAGCTGTGCATGTCTTC...TGCAGTTTTAGGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp GCTGAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCATGGAGGTGAAGACATaGACAGCTGCTGCGGTGGTA +
Preference number: 4 (lower is better)
Translates to: AEVTPLTDSRAGIQTLSTMEVKT*TAAAVV
Trigger: TACCACCGCAGCAGCTGTGCATGTCTTCACCTCCAT...GGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp CTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGATGGAGGTGAAGACATaGACAGCTGCTGCGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LTDSRAGIQTLSTWPQSLMEVKT*TAAAVV
Trigger: TACCACCGCAGCAGCTGTGCATGTCTTCACCTCCAT...CAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp TTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTATGGAGGTGAAGACATaGACAGCTGCTGCGGTGGTA +
Preference number: 4 (lower is better)
Translates to: FQSWHSNPVHLAPKPELLMEVKT*TAAAVV
Trigger: TACCACCGCAGCAGCTGTGCATGTCTTCACCTCCAT...AAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp GGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCTGGCCTCTGTGCCATTaGTTGCATTTACTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GHPTNRFQSWHSNPVHLAWPLCH*LHLLLL
Trigger: CAGGAGGAGTAAATGCAACCAATGGCACAGAGGCCA...GGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCTCTACGTACACAAGGTaGAAGAGGCTGGTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSSTYTR*KRLVSG
Trigger: TCCGGACACCAGCCTCTTCCACCTTGTGTACGTAGA...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCGGAAGAGTGAGCCAATaGAATTGCACAGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSGRVSQ*NCTVPG
Trigger: CCCTGGGACTGTGCAATTCCATTGGCTCACTCTTCC...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp ACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAGGAAGAGTGAGCCAATaGAATTGCACAGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TPLTDSRAGIQTLSTWPQGRVSQ*NCTVPG
Trigger: CCCTGGGACTGTGCAATTCCATTGGCTCACTCTTCC...TTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp AGGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGAAATTGAAAAGGTCTaGAAGAGTGAGCCAATGGAA +
Preference number: 4 (lower is better)
Translates to: RSGRSGIGLQVLLGRGSREIEKV*KSEPME
Trigger: TTCCATTGGCTCACTCTTCCAGACCTTTTCAATTTC...TCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp CACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCATCCCATGATGACTGCTaGGTTCACTCCAGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: HPTNRFQSWHSNPVHLAPSHDDC*VHSSLS
Trigger: CGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGA...TGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339444.10
CDS-3UTR CCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTGGCTCCAAGTCCTCCTaGGAAGGGGGAGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTGSKSS*EGGAEA
Trigger: AGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCC...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACGGCTCCAAGTCCTCCTaGGAAGGGGGAGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYGSKSS*EGGAEA
Trigger: AGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCC...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp ACTGAAAATCCAACGATGGCTATGGCAATGGCATCTACGTACACAAGGTGGAAGGGCTCCAAGTCCTCCTaGGAAGGGGGAGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: TENPTMAMAMASTYTRWKGSKSS*EGGAEA
Trigger: AGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCC...CTTCCACCTTGTGTACGTAGATGCCATTGCCATAGCCATCGTTGGATTTTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR TCA 90 bp TTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTAGTTCACTGAAGCCTTaGTCACTGAGGCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: FQSWHSNPVHLAPKPELLSSLKP*SLRLRA
Trigger: TGCTCTCAGCCTCAGTGATCAAGGCTTCAGTGAACT...AAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp GGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCGAGACAAGCATTTCCTaGGTGTCACCAGATCCAATG +
Preference number: 4 (lower is better)
Translates to: GHPTNRFQSWHSNPVHLAETSIS*VSPDPM
Trigger: CATTGGATCTGGTGACACTCAGGAAATGCTTGTCTC...GGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTTCCTGGAGGACCGGATaGCTAAAGATAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPSWRTG*LKIGLS
Trigger: GGAAAGGCCTATCTTTAGTCATCCGGTCCTCCAGGA...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp AGGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGACATCCACATTGTATaGTTCTTTCAAGTTAAACCC +
Preference number: 4 (lower is better)
Translates to: RSGRSGIGLQVLLGRGSRDIHIV*FFQVKP
Trigger: GGGTTTAACTTGAAAGAATCATACAATGTGGATGTC...TCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp GGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTTTACAGTCCCAGGGCAATaGGCTCCTGATTGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: GLSPCSHDDCWVHSSLSFTVPGQ*APDCRQ
Trigger: TTGACGGCAATCAGGAGCTCATTGCCCTGGGACTGT...AAACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423416.5
ENST00000456463.5
CDS-3UTR TCA 90 bp GGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCAAAGGTCTGGAAGAGTaGGCCAATGGAATTGCACAG +
Preference number: 4 (lower is better)
Translates to: GHPTNRFQSWHSNPVHLAKGLEE*ANGIAQ
Trigger: CTGTGCAATTCCATTGGCTCACTCTTCCAGACCTTT...GGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR GCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCGCGCTCCACAGCCGCTaGCTCTTCGACGCGCGCGCT +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSALHSR*LFDARA
Trigger: AGCGCGCGCGTCGAAGAGGCAGCGGCTGTGGAGCGC...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000432958.6
CDS-3UTR GCA 90 bp TTTGCATTTCCGACTTCCTTAGCGTACTTCCGCATGGCCTTTCTCCTTGCTCCCGCACCCCTGTGCTTATaGCTGAGACCAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: FAFPTSLAYFRMAFLLAPAPLCL*LRPSHP
Trigger: TGGGTGACTTGGTCTCAGGCATAAGCACAGGGGTGC...GGGAGCAAGGAGAAAGGCCATGCGGAAGTACGCTAAGGAAGTCGGAAATGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp AGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGGATTAGCTGAAGCACCCCTGTaGTTATGCCTGAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: SWHSNPVHLAPKPELLGLAEAPL*LCLRPS
Trigger: ACTTGGTCTCAGGCATAAGCACAGGGGTGCTTCAGC...TAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp GCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTGCCTAAAACTGCAGCTGAAGCACCCCTGTaGTTATGCCTGAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: AEASCSASASLSWLPKTAAEAPL*LCLRPS
Trigger: ACTTGGTCTCAGGCATAAGCACAGGGGTGCTTCAGC...TGCAGTTTTAGGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp ATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTGAAGACATGCACAGCTaGTGCGGTGGTAAACCCACG +
Preference number: 4 (lower is better)
Translates to: MAFLLAPMMTAGFTPVFREDMHS*CGGKPT
Trigger: CGTGGGTTTACCACCGCAGCAGCTGTGCATGTCTTC...ACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTCATGGCCTTTCTCCTTaGTCCCATGATGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPHGLSP*SHDDCW
Trigger: CCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATG...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339444.10
CDS-3UTR GCA 90 bp TACTTCCGCATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCACATGGCCTTTCTCCTTaGTCCCATGATGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: YFRMAFLLAPMMTAGFTPHGLSP*SHDDCW
Trigger: CCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATG...TGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATGCGGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp CTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGGTACAGGCCAAATATTaGAGGCACAGCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LTDSRAGIQTLSTWPQSLVQAKY*RHSCQH
Trigger: ATGCTGGCAGCTGTGCCTCCAATATTTGGCCTGTAC...CAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp ACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAGTACAGGCCAAATATTaGAGGCACAGCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: TPLTDSRAGIQTLSTWPQVQAKY*RHSCQH
Trigger: ATGCTGGCAGCTGTGCCTCCAATATTTGGCCTGTAC...TTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp ACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGGCCTCTGTGCCATTaGTTGCATTTACTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TDSRAGIQTLSTWPQSLNWPLCH*LHLLLL
Trigger: CAGGAGGAGTAAATGCAACCAATGGCACAGAGGCCA...GTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTCTCTCAAGGCATCTCTaGCCTCTGTGCCATTGGTTG +
Preference number: 4 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPLSRHL*PLCHWL
Trigger: CAACCAATGGCACAGAGGCCAGAGATGCCTTGAGAG...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp GCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTGCCTAAAACTGCACTCTCAAGGCATCTCTaGCCTCTGTGCCATTGGTTG +
Preference number: 4 (lower is better)
Translates to: AEASCSASASLSWLPKTALSRHL*PLCHWL
Trigger: CAACCAATGGCACAGAGGCCAGAGATGCCTTGAGAG...TGCAGTTTTAGGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp AATGACAGTGTGGACGTTATCCCCTGGGGGCATAAATCTTTGCATTTCCTCAGGGGCTGGTGTCCGGATTaGCTGGAGGTAGCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: NDSVDVIPWGHKSLHFLRGWCPD*LEVAAL
Trigger: TAGGGCTGCTACCTCCAGCCAATCCGGACACCAGCC...CCTGAGGAAATGCAAAGATTTATGCCCCCAGGGGATAACGTCCACACTGTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGGCTGGTGTCCGGATTaGCTGGAGGTAGCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPGWCPD*LEVAAL
Trigger: TAGGGCTGCTACCTCCAGCCAATCCGGACACCAGCC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp TACACAAGGTGGAAGAGGCTGGTGTCCGGATTGGCTGGAGGTAGCAGCCCTAGACGATGGCTATGGCAATaGCATCTACGTACACAAGGT +
Preference number: 4 (lower is better)
Translates to: YTRWKRLVSGLAGGSSPRRWLWQ*HLRTQG
Trigger: ACCTTGTGTACGTAGATGCCATTGCCATAGCCATCG...TCTAGGGCTGCTACCTCCAGCCAATCCGGACACCAGCCTCTTCCACCTTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR CCA 90 bp CCCCATCCTAGGGTGAGGTCCTCATCTATGCCTCAGGAGTGGCAGGAGTGGCATAGTGCCTCTCTAAGTTaGCTGCCTAAAACTGCATCA +
Preference number: 4 (lower is better)
Translates to: PHPRVRSSSMPQEWQEWHSASLS*LPKTAS
Trigger: TGATGCAGTTTTAGGCAGCCAACTTAGAGAGGCACT...ATGCCACTCCTGCCACTCCTGAGGCATAGATGAGGACCTCACCCTAGGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTTGGCAGGAGTGGCATTaGGCTCCAAGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPWQEWH*APSPPG
Trigger: CCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCA...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp AGCACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTAATATGACCAGCTGGCAGGAGTGGCATTaGGCTCCAAGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: STAWGNDSKRNPVANMTSWQEWH*APSPPG
Trigger: CCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCA...GCTGGTCATATTAGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp GGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCAACAGATTCCAGAGCTaGCATTCAAACCCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: GHPTNRFQSWHSNPVHLANRFQS*HSNPVH
Trigger: GTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTT...GGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp AGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGGATTAAGTTCACTGAAGCCTTaGTCACTGAGGCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SWHSNPVHLAPKPELLGLSSLKP*SLRLRA
Trigger: TGCTCTCAGCCTCAGTGATCAAGGCTTCAGTGAACT...TAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTAGTTCACTGAAGCCTTaGTCACTGAGGCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPSSLKP*SLRLRA
Trigger: TGCTCTCAGCCTCAGTGATCAAGGCTTCAGTGAACT...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCGAGACAAGCATTTCCTaGGTGTCACCAGATCCAATG +
Preference number: 4 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSETSIS*VSPDPM
Trigger: CATTGGATCTGGTGACACTCAGGAAATGCTTGTCTC...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp CACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCACAAGTTAAACCCAGCTaGAATGCCAGTTCCCATTAC +
Preference number: 4 (lower is better)
Translates to: HPTNRFQSWHSNPVHLAPQVKPS*NASSHY
Trigger: GTAATGGGAACTGGCATTTCAGCTGGGTTTAACTTG...TGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCCACCGGTTCCCTCCTaGACAAGGCTTCGAGACAAG +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPPPVPS*TRLRDK
Trigger: CTTGTCTCGAAGCCTTGTTCAGGAGGGAACCGGTGG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp TCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCAGAGCTCCACCGGTTCCCTCCTaGACAAGGCTTCGAGACAAG +
Preference number: 4 (lower is better)
Translates to: SEVLSDLAEVTPLTDSRAPPVPS*TRLRDK
Trigger: CTTGTCTCGAAGCCTTGTTCAGGAGGGAACCGGTGG...AGCTCTGGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR TCA 90 bp AATGACAGTGTGGACGTTATCCCCTGGGGGCATAAATCTTTGCATTTCCTCAGGCCACCGGTTCCCTCCTaGACAAGGCTTCGAGACAAG +
Preference number: 4 (lower is better)
Translates to: NDSVDVIPWGHKSLHFLRPPVPS*TRLRDK
Trigger: CTTGTCTCGAAGCCTTGTTCAGGAGGGAACCGGTGG...CCTGAGGAAATGCAAAGATTTATGCCCCCAGGGGATAACGTCCACACTGTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp AGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGGATTACACAGCCTGGGGCAATaGTTCAAAGAGGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: SWHSNPVHLAPKPELLGLHSLGQ*FKEESS
Trigger: ACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTG...TAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR TCA 90 bp TACTTCCGCATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCACACAGCCTGGGGCAATaGTTCAAAGAGGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: YFRMAFLLAPMMTAGFTPHSLGQ*FKEESS
Trigger: ACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTG...TGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATGCGGAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR TCA 90 bp ACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAACATTCCCTTCAGGTTaGCAATCACAATGGCCGACA +
Preference number: 4 (lower is better)
Translates to: TPLTDSRAGIQTLSTWPQTFPSG*QSQWPT
Trigger: TGTCGGCCATTGTGATTGTCAACCTGAAGGGAATGT...TTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR TCA 90 bp ACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACCTGGTCATCTCTGTATaGAAGCACTGCATCCTGCTA +
Preference number: 4 (lower is better)
Translates to: TDSRAGIQTLSTWPQSLNLVISV*KHCILL
Trigger: TAGCAGGATGCAGTGCTTTCATACAGAGATGACCAG...GTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339444.10
CDS-3UTR GCA 90 bp GATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCAGGAGTACATGTGAATaGCTGTTTCAGCTTATCCGC +
Preference number: 4 (lower is better)
Translates to: DSRAGIQTLSTWPQSLNCRSTCE*LFQLIR
Trigger: GCGGATAAGCTGAAACAGGCATTCACATGTACTCCT...GCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp GGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCTCTGTGCCATTGGTTaGATTTACTCCTCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: GHPTNRFQSWHSNPVHLALCAIG*IYSSWN
Trigger: ATTCCAGGAGGAGTAAATGCAACCAATGGCACAGAG...GGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGACATGCACAGCTGCTaGGGTGGTAAACCCACGGAC +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPDMHSC*GGKPTD
Trigger: GTCCGTGGGTTTACCACCGCAGCAGCTGTGCATGTC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp GGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCGGGAGATCTGAGAACTaGATAAACATTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GHPTNRFQSWHSNPVHLAGRSEN*INIPFR
Trigger: CCTGAAGGGAATGTTTATGCAGTTCTCAGATCTCCC...GGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR GCA 90 bp CTGGGAAGGGGGAGCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTGGGGGCATAAATCTTTaGATTTCCTCAGGAAATGTG +
Preference number: 4 (lower is better)
Translates to: LGRGSRGFLFSKCLSKLAGGINL*ISSGNV
Trigger: CACATTTCCTGAGGAAATGCAAAGATTTATGCCCCC...AGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGCTCCCCCTTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGACAAGATCCCCCGCTaGGAGCTCCAGTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPDKIPR*ELQCSS
Trigger: TGAACTGCACTGGAGCTCCCAGCGGGGGATCTTGTC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp CACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCATCAGCTTATCCGCAATaGAATCAGGAACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: HPTNRFQSWHSNPVHLAPSAYPQ*NQEPCP
Trigger: AGGACAAGGTTCCTGATTCCATTGCGGATAAGCTGA...TGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp GATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCCAGCAAAAGGACCTATaGATATGTGTCTGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: DSRAGIQTLSTWPQSLNCQQKDL*ICVWRF
Trigger: GAACCTCCAGACACATATCCATAGGTCCTTTTGCTG...GCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp AGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGGATTATGGCCTCTGTGCCATTaGTTGCATTTACTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SWHSNPVHLAPKPELLGLWPLCH*LHLLLL
Trigger: CAGGAGGAGTAAATGCAACCAATGGCACAGAGGCCA...TAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp ACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACGTAAGGTCACAGACATaGCGACTTTCACTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: TDSRAGIQTLSTWPQSLNVRSQT*RLSLSR
Trigger: CCTTGAGAGTGAAAGTCGCCATGTCTGTGACCTTAC...GTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp CTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGGTAAGGTCACAGACATaGCGACTTTCACTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: LTDSRAGIQTLSTWPQSLVRSQT*RLSLSR
Trigger: CCTTGAGAGTGAAAGTCGCCATGTCTGTGACCTTAC...CAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp CTTCCGCATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTGTAAGGTCACAGACATaGCGACTTTCACTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: LPHGLSPCSHDDCWVHSSVRSQT*RLSLSR
Trigger: CCTTGAGAGTGAAAGTCGCCATGTCTGTGACCTTAC...ACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATGCGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTGGCTGGTGTCCGGATTaGCTGGAGGTAGCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTGWCPD*LEVAAL
Trigger: TAGGGCTGCTACCTCCAGCCAATCCGGACACCAGCC...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGGCTGGTGTCCGGATTaGCTGGAGGTAGCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWGWCPD*LEVAAL
Trigger: TAGGGCTGCTACCTCCAGCCAATCCGGACACCAGCC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACGGCTGGTGTCCGGATTaGCTGGAGGTAGCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYGWCPD*LEVAAL
Trigger: TAGGGCTGCTACCTCCAGCCAATCCGGACACCAGCC...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCGATGGCTATGGCAATaGCATCTACGTACACAAGGT +
Preference number: 4 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSRWLWQ*HLRTQG
Trigger: ACCTTGTGTACGTAGATGCCATTGCCATAGCCATCG...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp ACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAACGATGGCTATGGCAATaGCATCTACGTACACAAGGT +
Preference number: 4 (lower is better)
Translates to: TPLTDSRAGIQTLSTWPQRWLWQ*HLRTQG
Trigger: ACCTTGTGTACGTAGATGCCATTGCCATAGCCATCG...TTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp ACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACGTGGACGTTATCCCCTaGGGGCATAAATCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: TDSRAGIQTLSTWPQSLNVDVIP*GHKSLH
Trigger: ATGCAAAGATTTATGCCCCCAGGGGATAACGTCCAC...GTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339444.10
CDS-3UTR CCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTTGGCAGGAGTGGCATTaGGCTCCAAGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTWQEWH*APSPPG
Trigger: CCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCA...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGTGGCAGGAGTGGCATTaGGCTCCAAGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWWQEWH*APSPPG
Trigger: CCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCA...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp TCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCAGAGCTCAAACCCTGTCCACCTaGCCCCAAAGCCTGAACTGC +
Preference number: 4 (lower is better)
Translates to: SEVLSDLAEVTPLTDSRAQTLST*PQSLNC
Trigger: GCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTG...AGCTCTGGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCAACAGATTCCAGAGCTaGCATTCAAACCCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSNRFQS*HSNPVH
Trigger: GTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTT...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp AGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGGATTAGAGACAAGCATTTCCTaGGTGTCACCAGATCCAATG +
Preference number: 4 (lower is better)
Translates to: SWHSNPVHLAPKPELLGLETSIS*VSPDPM
Trigger: CATTGGATCTGGTGACACTCAGGAAATGCTTGTCTC...TAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp TCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCAGAGCTCCCTGTGCTTATGCCTaGGACCAAGTCACCCAACAC +
Preference number: 4 (lower is better)
Translates to: SEVLSDLAEVTPLTDSRAPCAYA*DQVTQH
Trigger: GTGTTGGGTGACTTGGTCTCAGGCATAAGCACAGGG...AGCTCTGGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCCCTGTGCTTATGCCTaGGACCAAGTCACCCAACAC +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPPCAYA*DQVTQH
Trigger: GTGTTGGGTGACTTGGTCTCAGGCATAAGCACAGGG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp CCCCATCCTAGGGTGAGGTCCTCATCTATGCCTCAGGAGTGGCAGGAGTGGCATCTAGGCAAAACTGAATaGTTCCTGAAAGTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: PHPRVRSSSMPQEWQEWHLGKTE*FLKVRS
Trigger: TGACCTTACTTTCAGGAATCATTCAGTTTTGCCTAG...ATGCCACTCCTGCCACTCCTGAGGCATAGATGAGGACCTCACCCTAGGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp CCCCATCCTAGGGTGAGGTCCTCATCTATGCCTCAGGAGTGGCAGGAGTGGCATACACCTAGGCAAAACTaGATGATTCCTGAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: PHPRVRSSSMPQEWQEWHTPRQN*MIPESK
Trigger: CTTACTTTCAGGAATCATTCAGTTTTGCCTAGGTGT...ATGCCACTCCTGCCACTCCTGAGGCATAGATGAGGACCTCACCCTAGGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCAAGTTAAACCCAGCTaGAATGCCAGTTCCCATTAC +
Preference number: 4 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWQVKPS*NASSHY
Trigger: GTAATGGGAACTGGCATTTCAGCTGGGTTTAACTTG...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp CTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGCATGGAGATGGTCACTaGAAATCCAACGATGGCTAT +
Preference number: 4 (lower is better)
Translates to: LTDSRAGIQTLSTWPQSLHGDGH*KSNDGY
Trigger: ATAGCCATCGTTGGATTTTCAGTGACCATCTCCATG...CAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR TCA 90 bp TCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCAGAGCTACAGTCCCAGGGCAATaGGCTCCTGATTGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: SEVLSDLAEVTPLTDSRATVPGQ*APDCRQ
Trigger: TTGACGGCAATCAGGAGCTCATTGCCCTGGGACTGT...AGCTCTGGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR TCA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTAAAGGTCTGGAAGAGTaGGCCAATGGAATTGCACAG +
Preference number: 4 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPKGLEE*ANGIAQ
Trigger: CTGTGCAATTCCATTGGCTCACTCTTCCAGACCTTT...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR TCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTCCACCGGTTCCCTCCTaGACAAGGCTTCGAGACAAG +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTPPVPS*TRLRDK
Trigger: CTTGTCTCGAAGCCTTGTTCAGGAGGGAACCGGTGG...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCCACCGGTTCCCTCCTaGACAAGGCTTCGAGACAAG +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWPPVPS*TRLRDK
Trigger: CTTGTCTCGAAGCCTTGTTCAGGAGGGAACCGGTGG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTACATTCCCTTCAGGTTaGCAATCACAATGGCCGACA +
Preference number: 4 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPTFPSG*QSQWPT
Trigger: TGTCGGCCATTGTGATTGTCAACCTGAAGGGAATGT...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR TCA 90 bp CACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAGAAAAAGGGGAGATCTaGGAACTGCATAAACATTCC +
Preference number: 4 (lower is better)
Translates to: HPTNRFQSWHSNPVHLAPEKGEI*ELHKHS
Trigger: GGAATGTTTATGCAGTTCTCAGATCTCCCCTTTTTC...TGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR TCA 90 bp CTGGGAAGGGGGAGCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTAAAATCTATTCCGAGTaGGGTCATTCACAACTTGTG +
Preference number: 4 (lower is better)
Translates to: LGRGSRGFLFSKCLSKLAKIYSE*GHSQLV
Trigger: CACAAGTTGTGAATGACCTCACTCGGAATAGATTTT...AGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGCTCCCCCTTCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTAACCCCATCCTAGGGTaGGGTCCTCATCTATGCCTC +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPNPILG*GPHLCL
Trigger: GAGGCATAGATGAGGACCTCACCCTAGGATGGGGTT...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp CAAAGTTCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCCCTGGCCCCAAAGCCTaGACTGCTTGGATTACACGG +
Preference number: 4 (lower is better)
Translates to: QSSEVLSDLAEVTPLTDSPGPKA*TAWITR
Trigger: CCGTGTAATCCAAGCAGTTCAGGCTTTGGGGCCAGG...GGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGAACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp ACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGGAGTACATGTGAATaGCTGTTTCAGCTTATCCGC +
Preference number: 4 (lower is better)
Translates to: TPLTDSRAGIQTLSTWPQRSTCE*LFQLIR
Trigger: GCGGATAAGCTGAAACAGGCATTCACATGTACTCCT...TTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp TTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTCTCTGTGCCATTGGTTaGATTTACTCCTCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: FQSWHSNPVHLAPKPELLLCAIG*IYSSWN
Trigger: ATTCCAGGAGGAGTAAATGCAACCAATGGCACAGAG...AAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGACATGCACAGCTGCTaGGGTGGTAAACCCACGGAC +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWDMHSC*GGKPTD
Trigger: GTCCGTGGGTTTACCACCGCAGCAGCTGTGCATGTC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACGACATGCACAGCTGCTaGGGTGGTAAACCCACGGAC +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYDMHSC*GGKPTD
Trigger: GTCCGTGGGTTTACCACCGCAGCAGCTGTGCATGTC...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGAAGACATGCACAGCTaGTGCGGTGGTAAACCCACG +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPEDMHS*CGGKPT
Trigger: CGTGGGTTTACCACCGCAGCAGCTGTGCATGTCTTC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp CTTCCGCATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTGGGAGATCTGAGAACTaGATAAACATTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LPHGLSPCSHDDCWVHSSGRSEN*INIPFR
Trigger: CCTGAAGGGAATGTTTATGCAGTTCTCAGATCTCCC...ACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATGCGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp ACAATGGCCGACAGCACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTTTCCTGTTCAGCAAGTaGCTCTCTAAGTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TMADSTAWGNDSKRNPVAFLFSK*LSKLAA
Trigger: GGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAA...AGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTGCTGTCGGCCATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACGACAAGATCCCCCGCTaGGAGCTCCAGTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYDKIPR*ELQCSS
Trigger: TGAACTGCACTGGAGCTCCCAGCGGGGGATCTTGTC...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGACAAGATCCCCCGCTaGGAGCTCCAGTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWDKIPR*ELQCSS
Trigger: TGAACTGCACTGGAGCTCCCAGCGGGGGATCTTGTC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAAGACAAGATCCCCCGCTaGGAGCTCCAGTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKDKIPR*ELQCSS
Trigger: TGAACTGCACTGGAGCTCCCAGCGGGGGATCTTGTC...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp AGGCTTCGAGACAAGGAGCATGAAATTGAAAAGGTCTGGAAGAGTGAGCCAATGGACAAGATCCCCCGCTaGGAGCTCCAGTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: RLRDKEHEIEKVWKSEPMDKIPR*ELQCSS
Trigger: TGAACTGCACTGGAGCTCCCAGCGGGGGATCTTGTC...CATTGGCTCACTCTTCCAGACCTTTTCAATTTCATGCTCCTTGTCTCGAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCTCAGCTTATCCGCAATaGAATCAGGAACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSSAYPQ*NQEPCP
Trigger: AGGACAAGGTTCCTGATTCCATTGCGGATAAGCTGA...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCAGCAAAAGGACCTATaGATATGTGTCTGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWQQKDL*ICVWRF
Trigger: GAACCTCCAGACACATATCCATAGGTCCTTTTGCTG...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp TTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTCAGCAAAAGGACCTATaGATATGTGTCTGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: FQSWHSNPVHLAPKPELLQQKDL*ICVWRF
Trigger: GAACCTCCAGACACATATCCATAGGTCCTTTTGCTG...AAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGTAAGGTCACAGACATaGCGACTTTCACTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPVRSQT*RLSLSR
Trigger: CCTTGAGAGTGAAAGTCGCCATGTCTGTGACCTTAC...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCAAGGTGGAAGAGGCTaGTGTCCGGATTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWQGGRG*CPDWLE
Trigger: CTCCAGCCAATCCGGACACCAGCCTCTTCCACCTTG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACCAAGGTGGAAGAGGCTaGTGTCCGGATTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYQGGRG*CPDWLE
Trigger: CTCCAGCCAATCCGGACACCAGCCTCTTCCACCTTG...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp GCTGAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCATCCAACGATGGCTATaGCAATGGCATCTACGTACA +
Preference number: 4 (lower is better)
Translates to: AEVTPLTDSRAGIQTLSTIQRWL*QWHLRT
Trigger: TGTACGTAGATGCCATTGCCATAGCCATCGTTGGAT...GGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCATCCAACGATGGCTATaGCAATGGCATCTACGTACA +
Preference number: 4 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSIQRWL*QWHLRT
Trigger: TGTACGTAGATGCCATTGCCATAGCCATCGTTGGAT...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCTCTTGGCCATGGAGATaGTCACTGAAAATCCAACGA +
Preference number: 4 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSSWPWR*SLKIQR
Trigger: TCGTTGGATTTTCAGTGACCATCTCCATGGCCAAGA...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp ACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAATCTTGGCCATGGAGATaGTCACTGAAAATCCAACGA +
Preference number: 4 (lower is better)
Translates to: TPLTDSRAGIQTLSTWPQSWPWR*SLKIQR
Trigger: TCGTTGGATTTTCAGTGACCATCTCCATGGCCAAGA...TTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCTATTTGCTAAGGTCTTaGCCATGGAGATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSYLLRS*PWRWSL
Trigger: CAGTGACCATCTCCATGGCCAAGACCTTAGCAAATA...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp TGCCTAAAACTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATGGAAGAGTGAGCCAATaGAATTGCACAGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: CLKLHHECCGTAAPIGQDGRVSQ*NCTVPG
Trigger: CCCTGGGACTGTGCAATTCCATTGGCTCACTCTTCC...ATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAGTTTTAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp CTGGGAAGGGGGAGCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTGAAATTGAAAAGGTCTaGAAGAGTGAGCCAATGGAA +
Preference number: 4 (lower is better)
Translates to: LGRGSRGFLFSKCLSKLAEIEKV*KSEPME
Trigger: TTCCATTGGCTCACTCTTCCAGACCTTTTCAATTTC...AGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGCTCCCCCTTCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGCCGACAGCACAGCCTaGGGCAATGATTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPADSTA*GNDSKR
Trigger: CCTCTTTGAATCATTGCCCCAGGCTGTGCTGTCGGC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000445809.5
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTTCTATGCCTCAGGAGTaGCAGGAGTGGCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPSMPQE*QEWHWA
Trigger: AGCCCAATGCCACTCCTGCCACTCCTGAGGCATAGA...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp AATGACAGTGTGGACGTTATCCCCTGGGGGCATAAATCTTTGCATTTCCTCAGGTCTATGCCTCAGGAGTaGCAGGAGTGGCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: NDSVDVIPWGHKSLHFLRSMPQE*QEWHWA
Trigger: AGCCCAATGCCACTCCTGCCACTCCTGAGGCATAGA...CCTGAGGAAATGCAAAGATTTATGCCCCCAGGGGATAACGTCCACACTGTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp GCTGAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCACGGTCTCCATCTTCTaGTCATCTCTGTATGAAAGC +
Preference number: 4 (lower is better)
Translates to: AEVTPLTDSRAGIQTLSTTVSIF*SSLYES
Trigger: GCTTTCATACAGAGATGACCAGAAGATGGAGACCGT...GGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp ACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAACGGTCTCCATCTTCTaGTCATCTCTGTATGAAAGC +
Preference number: 4 (lower is better)
Translates to: TPLTDSRAGIQTLSTWPQTVSIF*SSLYES
Trigger: GCTTTCATACAGAGATGACCAGAAGATGGAGACCGT...TTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACCCCTGTGCTTATGCCTaGGACCAAGTCACCCAACAC +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYPCAYA*DQVTQH
Trigger: GTGTTGGGTGACTTGGTCTCAGGCATAAGCACAGGG...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCCCTGTGCTTATGCCTaGGACCAAGTCACCCAACAC +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWPCAYA*DQVTQH
Trigger: GTGTTGGGTGACTTGGTCTCAGGCATAAGCACAGGG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp CACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCACTAGGCAAAACTGAATaGTTCCTGAAAGTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: HPTNRFQSWHSNPVHLAPLGKTE*FLKVRS
Trigger: TGACCTTACTTTCAGGAATCATTCAGTTTTGCCTAG...TGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp CACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAACACCTAGGCAAAACTaGATGATTCCTGAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: HPTNRFQSWHSNPVHLAPTPRQN*MIPESK
Trigger: CTTACTTTCAGGAATCATTCAGTTTTGCCTAGGTGT...TGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp AGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGGATTACAAGTTAAACCCAGCTaGAATGCCAGTTCCCATTAC +
Preference number: 4 (lower is better)
Translates to: SWHSNPVHLAPKPELLGLQVKPS*NASSHY
Trigger: GTAATGGGAACTGGCATTTCAGCTGGGTTTAACTTG...TAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp TACTTCCGCATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCACAAGTTAAACCCAGCTaGAATGCCAGTTCCCATTAC +
Preference number: 4 (lower is better)
Translates to: YFRMAFLLAPMMTAGFTPQVKPS*NASSHY
Trigger: GTAATGGGAACTGGCATTTCAGCTGGGTTTAACTTG...TGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATGCGGAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR TCA 90 bp GCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTGCCTAAAACTGCACAAGTTAAACCCAGCTaGAATGCCAGTTCCCATTAC +
Preference number: 4 (lower is better)
Translates to: AEASCSASASLSWLPKTAQVKPS*NASSHY
Trigger: GTAATGGGAACTGGCATTTCAGCTGGGTTTAACTTG...TGCAGTTTTAGGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp AGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGGATTACATGGAGATGGTCACTaGAAATCCAACGATGGCTAT +
Preference number: 4 (lower is better)
Translates to: SWHSNPVHLAPKPELLGLHGDGH*KSNDGY
Trigger: ATAGCCATCGTTGGATTTTCAGTGACCATCTCCATG...TAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR TCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACAGTCCCAGGGCAATaGGCTCCTGATTGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTTVPGQ*APDCRQ
Trigger: TTGACGGCAATCAGGAGCTCATTGCCCTGGGACTGT...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR TCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACACAGTCCCAGGGCAATaGGCTCCTGATTGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYTVPGQ*APDCRQ
Trigger: TTGACGGCAATCAGGAGCTCATTGCCCTGGGACTGT...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR TCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACAGTCCCAGGGCAATaGGCTCCTGATTGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWTVPGQ*APDCRQ
Trigger: TTGACGGCAATCAGGAGCTCATTGCCCTGGGACTGT...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR TCA 90 bp TTTGCATTTCCGACTTCCTTAGCGTACTTCCGCATGGCCTTTCTCCTTGCTCCCAAAGGTCTGGAAGAGTaGGCCAATGGAATTGCACAG +
Preference number: 4 (lower is better)
Translates to: FAFPTSLAYFRMAFLLAPKGLEE*ANGIAQ
Trigger: CTGTGCAATTCCATTGGCTCACTCTTCCAGACCTTT...GGGAGCAAGGAGAAAGGCCATGCGGAAGTACGCTAAGGAAGTCGGAAATGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR TCA 90 bp TTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGAAAAAGGGGAGATCTaGGAACTGCATAAACATTCC +
Preference number: 4 (lower is better)
Translates to: FQSWHSNPVHLAPKPELLEKGEI*ELHKHS
Trigger: GGAATGTTTATGCAGTTCTCAGATCTCCCCTTTTTC...AAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR TCA 90 bp TTTGCATTTCCGACTTCCTTAGCGTACTTCCGCATGGCCTTTCTCCTTGCTCCCCCTAAAACTGCATCATaGATGCTGTGGAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: FAFPTSLAYFRMAFLLAPPKTAS*MLWNSS
Trigger: GCTGCTGTTCCACAGCATTCATGATGCAGTTTTAGG...GGGAGCAAGGAGAAAGGCCATGCGGAAGTACGCTAAGGAAGTCGGAAATGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR TCA 90 bp GGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTTTCCTAAAACTGCATCATaGATGCTGTGGAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLSPCSHDDCWVHSSLSFPKTAS*MLWNSS
Trigger: GCTGCTGTTCCACAGCATTCATGATGCAGTTTTAGG...AAACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR TCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTAACCCCATCCTAGGGTaGGGTCCTCATCTATGCCTC +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTNPILG*GPHLCL
Trigger: GAGGCATAGATGAGGACCTCACCCTAGGATGGGGTT...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACAACCCCATCCTAGGGTaGGGTCCTCATCTATGCCTC +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYNPILG*GPHLCL
Trigger: GAGGCATAGATGAGGACCTCACCCTAGGATGGGGTT...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAAAACCCCATCCTAGGGTaGGGTCCTCATCTATGCCTC +
Preference number: 4 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKNPILG*GPHLCL
Trigger: GAGGCATAGATGAGGACCTCACCCTAGGATGGGGTT...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp GATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCATAGTACCTCTGGGTTaGTGCAAGGATTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: DSRAGIQTLSTWPQSLNCIVPLG*CKDFIF
Trigger: GAAAATGAAATCCTTGCAGCAACCCAGAGGTACTAT...GCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp AGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGGATTAAGGAGTACATGTGAATaGCTGTTTCAGCTTATCCGC +
Preference number: 4 (lower is better)
Translates to: SWHSNPVHLAPKPELLGLRSTCE*LFQLIR
Trigger: GCGGATAAGCTGAAACAGGCATTCACATGTACTCCT...TAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACGCACCCCTGTGCTTATaGCTGAGACCAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYAPLCL*LRPSHP
Trigger: TGGGTGACTTGGTCTCAGGCATAAGCACAGGGGTGC...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGCACCCCTGTGCTTATaGCTGAGACCAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWAPLCL*LRPSHP
Trigger: TGGGTGACTTGGTCTCAGGCATAAGCACAGGGGTGC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAAGCACCCCTGTGCTTATaGCTGAGACCAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKAPLCL*LRPSHP
Trigger: TGGGTGACTTGGTCTCAGGCATAAGCACAGGGGTGC...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGCTGAAGCACCCCTGTaGTTATGCCTGAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPAEAPL*LCLRPS
Trigger: ACTTGGTCTCAGGCATAAGCACAGGGGTGCTTCAGC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp AGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGGATTACTCTGTGCCATTGGTTaGATTTACTCCTCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SWHSNPVHLAPKPELLGLLCAIG*IYSSWN
Trigger: ATTCCAGGAGGAGTAAATGCAACCAATGGCACAGAG...TAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACGAAGACATGCACAGCTaGTGCGGTGGTAAACCCACG +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYEDMHS*CGGKPT
Trigger: CGTGGGTTTACCACCGCAGCAGCTGTGCATGTCTTC...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAAGAAGACATGCACAGCTaGTGCGGTGGTAAACCCACG +
Preference number: 4 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKEDMHS*CGGKPT
Trigger: CGTGGGTTTACCACCGCAGCAGCTGTGCATGTCTTC...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGGGAGATCTGAGAACTaGATAAACATTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPGRSEN*INIPFR
Trigger: CCTGAAGGGAATGTTTATGCAGTTCTCAGATCTCCC...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR GCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCATGGCCTTTCTCCTTaGTCCCATGATGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPHGLSP*SHDDCW
Trigger: CCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR GCA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTTGCGTTGGCCATATTTaGATTTCCGACTTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPCVGHI*ISDFLS
Trigger: GCTAAGGAAGTCGGAAATGCAAATATGGCCAACGCA...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339444.10
CDS-3UTR GCA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCGGGGGCATAAATCTTTaGATTTCCTCAGGAAATGTG +
Preference number: 4 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSGGINL*ISSGNV
Trigger: CACATTTCCTGAGGAAATGCAAAGATTTATGCCCCC...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339444.10
CDS-3UTR CCA 90 bp GCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTGCCTAAAACTGCACAGCAAAAGGACCTATaGATATGTGTCTGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: AEASCSASASLSWLPKTAQQKDL*ICVWRF
Trigger: GAACCTCCAGACACATATCCATAGGTCCTTTTGCTG...TGCAGTTTTAGGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCTCTCAAGGCATCTCTaGCCTCTGTGCCATTGGTTG +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPLSRHL*PLCHWL
Trigger: CAACCAATGGCACAGAGGCCAGAGATGCCTTGAGAG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp AATGACAGTGTGGACGTTATCCCCTGGGGGCATAAATCTTTGCATTTCCTCAGGCTCTCAAGGCATCTCTaGCCTCTGTGCCATTGGTTG +
Preference number: 4 (lower is better)
Translates to: NDSVDVIPWGHKSLHFLRLSRHL*PLCHWL
Trigger: CAACCAATGGCACAGAGGCCAGAGATGCCTTGAGAG...CCTGAGGAAATGCAAAGATTTATGCCCCCAGGGGATAACGTCCACACTGTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp TCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCAGAGCTTCTACGTACACAAGGTaGAAGAGGCTGGTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: SEVLSDLAEVTPLTDSRASTYTR*KRLVSG
Trigger: TCCGGACACCAGCCTCTTCCACCTTGTGTACGTAGA...AGCTCTGGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTTCTACGTACACAAGGTaGAAGAGGCTGGTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPSTYTR*KRLVSG
Trigger: TCCGGACACCAGCCTCTTCCACCTTGTGTACGTAGA...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp GCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTGCCTAAAACTGCATCTTGGCCATGGAGATaGTCACTGAAAATCCAACGA +
Preference number: 4 (lower is better)
Translates to: AEASCSASASLSWLPKTASWPWR*SLKIQR
Trigger: TCGTTGGATTTTCAGTGACCATCTCCATGGCCAAGA...TGCAGTTTTAGGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTTATTTGCTAAGGTCTTaGCCATGGAGATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPYLLRS*PWRWSL
Trigger: CAGTGACCATCTCCATGGCCAAGACCTTAGCAAATA...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGGAAGAGTGAGCCAATaGAATTGCACAGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPGRVSQ*NCTVPG
Trigger: CCCTGGGACTGTGCAATTCCATTGGCTCACTCTTCC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp TGTGCACTGCATCCTGCTAAGTATACATATATACCGACGTCTCCATATTCTTTTGGCTCCAAGTCCTCCTaGGAAGGGGGAGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: CALHPAKYTYIPTSPYSFGSKSS*EGGAEA
Trigger: AGCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCC...AAAAGAATATGGAGACGTCGGTATATATGTATACTTAGCAGGATGCAGTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGTCTATGCCTCAGGAGTaGCAGGAGTGGCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWSMPQE*QEWHWA
Trigger: AGCCCAATGCCACTCCTGCCACTCCTGAGGCATAGA...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAATCTATGCCTCAGGAGTaGCAGGAGTGGCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKSMPQE*QEWHWA
Trigger: AGCCCAATGCCACTCCTGCCACTCCTGAGGCATAGA...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp AGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGGATTAACGGTCTCCATCTTCTaGTCATCTCTGTATGAAAGC +
Preference number: 4 (lower is better)
Translates to: SWHSNPVHLAPKPELLGLTVSIF*SSLYES
Trigger: GCTTTCATACAGAGATGACCAGAAGATGGAGACCGT...TAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTCCTGGAGGACCGGATaGCTAAAGATAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYSWRTG*LKIGLS
Trigger: GGAAAGGCCTATCTTTAGTCATCCGGTCCTCCAGGA...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGTCCTGGAGGACCGGATaGCTAAAGATAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWSWRTG*LKIGLS
Trigger: GGAAAGGCCTATCTTTAGTCATCCGGTCCTCCAGGA...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTTCCTGGAGGACCGGATaGCTAAAGATAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTSWRTG*LKIGLS
Trigger: GGAAAGGCCTATCTTTAGTCATCCGGTCCTCCAGGA...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp ACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTAATATGACCAGCAGATCCTGGAGGACCGGATaGCTAAAGATAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: TAWGNDSKRNPVANMTSRSWRTG*LKIGLS
Trigger: GGAAAGGCCTATCTTTAGTCATCCGGTCCTCCAGGA...TCTGCTGGTCATATTAGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR TCA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAATCCTGGAGGACCGGATaGCTAAAGATAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKSWRTG*LKIGLS
Trigger: GGAAAGGCCTATCTTTAGTCATCCGGTCCTCCAGGA...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp CACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAGATAACAGGGTAAAATaGAGAGTACAGGCCAAATAT +
Preference number: 4 (lower is better)
Translates to: HPTNRFQSWHSNPVHLAPDNRVK*RVQAKY
Trigger: ATATTTGGCCTGTACTCTTCATTTTACCCTGTTATC...TGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp GCTGAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCCTAGGCAAAACTGAATaGTTCCTGAAAGTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: AEVTPLTDSRAGIQTLSTLGKTE*FLKVRS
Trigger: TGACCTTACTTTCAGGAATCATTCAGTTTTGCCTAG...GGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCACACCTAGGCAAAACTaGATGATTCCTGAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSTPRQN*MIPESK
Trigger: CTTACTTTCAGGAATCATTCAGTTTTGCCTAGGTGT...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp ACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAACACCTAGGCAAAACTaGATGATTCCTGAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: TPLTDSRAGIQTLSTWPQTPRQN*MIPESK
Trigger: CTTACTTTCAGGAATCATTCAGTTTTGCCTAGGTGT...TTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp GGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCGACATCCACATTGTATaGTTCTTTCAAGTTAAACCC +
Preference number: 4 (lower is better)
Translates to: GHPTNRFQSWHSNPVHLADIHIV*FFQVKP
Trigger: GGGTTTAACTTGAAAGAATCATACAATGTGGATGTC...GGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp CACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAGACATCCACATTGTATaGTTCTTTCAAGTTAAACCC +
Preference number: 4 (lower is better)
Translates to: HPTNRFQSWHSNPVHLAPDIHIV*FFQVKP
Trigger: GGGTTTAACTTGAAAGAATCATACAATGTGGATGTC...TGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp TATTTTACTTCACCATCCTCTTCTTCAGGCTTGGTAGCATCCTCTCCATCTACTCCACCGGTTCCCTCCTaGACAAGGCTTCGAGACAAG +
Preference number: 4 (lower is better)
Translates to: YFTSPSSSSGLVASSPSTPPVPS*TRLRDK
Trigger: CTTGTCTCGAAGCCTTGTTCAGGAGGGAACCGGTGG...AGTAGATGGAGAGGATGCTACCAAGCCTGAAGAAGAGGATGGTGAAGTAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp GTGAGGTCATTCACAACTTGTGCACTGCATCCTGCTAAGTATACATATATACCGCCACCGGTTCCCTCCTaGACAAGGCTTCGAGACAAG +
Preference number: 4 (lower is better)
Translates to: VRSFTTCALHPAKYTYIPPPVPS*TRLRDK
Trigger: CTTGTCTCGAAGCCTTGTTCAGGAGGGAACCGGTGG...CGGTATATATGTATACTTAGCAGGATGCAGTGCACAAGTTGTGAATGACCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCACAGCCTGGGGCAATaGTTCAAAGAGGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPHSLGQ*FKEESS
Trigger: ACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000445809.5
CDS-3UTR TCA 90 bp TCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCAGAGCTCACAGCCTGGGGCAATaGTTCAAAGAGGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: SEVLSDLAEVTPLTDSRAHSLGQ*FKEESS
Trigger: ACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTG...AGCTCTGGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR GCA 90 bp TTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTATAGTACCTCTGGGTTaGTGCAAGGATTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: FQSWHSNPVHLAPKPELLIVPLG*CKDFIF
Trigger: GAAAATGAAATCCTTGCAGCAACCCAGAGGTACTAT...AAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp CCCCATCCTAGGGTGAGGTCCTCATCTATGCCTCAGGAGTGGCAGGAGTGGCATTTCCTTGAATTTGTATaGTGGCAGCCATTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: PHPRVRSSSMPQEWQEWHFLEFV*WQPFSY
Trigger: ATAACTAAATGGCTGCCAGCATACAAATTCAAGGAA...ATGCCACTCCTGCCACTCCTGAGGCATAGATGAGGACCTCACCCTAGGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTGCTGAAGCACCCCTGTaGTTATGCCTGAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTAEAPL*LCLRPS
Trigger: ACTTGGTCTCAGGCATAAGCACAGGGGTGCTTCAGC...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGCTGAAGCACCCCTGTaGTTATGCCTGAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWAEAPL*LCLRPS
Trigger: ACTTGGTCTCAGGCATAAGCACAGGGGTGCTTCAGC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACATGGAGGTGAAGACATaGACAGCTGCTGCGGTGGTA +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYMEVKT*TAAAVV
Trigger: TACCACCGCAGCAGCTGTGCATGTCTTCACCTCCAT...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTATGGAGGTGAAGACATaGACAGCTGCTGCGGTGGTA +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTMEVKT*TAAAVV
Trigger: TACCACCGCAGCAGCTGTGCATGTCTTCACCTCCAT...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGATGGAGGTGAAGACATaGACAGCTGCTGCGGTGGTA +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWMEVKT*TAAAVV
Trigger: TACCACCGCAGCAGCTGTGCATGTCTTCACCTCCAT...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAACATGGCCTTTCTCCTTaGTCCCATGATGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKHGLSP*SHDDCW
Trigger: CCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATG...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCATGGCCTTTCTCCTTaGTCCCATGATGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWHGLSP*SHDDCW
Trigger: CCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR GCA 90 bp ACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTTGACAACAGTTaGGTTGGCCATATTTGCATT +
Preference number: 4 (lower is better)
Translates to: TDSRAGIQTLSTWPQSLNCFDNS*VGHICI
Trigger: AATGCAAATATGGCCAACGCAACTGTTGTCAAAGCA...GTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339444.10
CDS-3UTR GCA 90 bp TTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTTTCTTTTACAATCCCTaGCAGAGTTTTCACTCCAAC +
Preference number: 4 (lower is better)
Translates to: FQSWHSNPVHLAPKPELLFFYNP*QSFHSN
Trigger: GTTGGAGTGAAAACTCTGGCAGGGATTGTAAAAGAA...AAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000339444.10
CDS-3UTR GCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTTTCCTGTTCAGCAAGTaGCTCTCTAAGTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPFLFSK*LSKLAA
Trigger: GGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAA...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp TTTGCATTTCCGACTTCCTTAGCGTACTTCCGCATGGCCTTTCTCCTTGCTCCCTCAGCTTATCCGCAATaGAATCAGGAACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: FAFPTSLAYFRMAFLLAPSAYPQ*NQEPCP
Trigger: AGGACAAGGTTCCTGATTCCATTGCGGATAAGCTGA...GGGAGCAAGGAGAAAGGCCATGCGGAAGTACGCTAAGGAAGTCGGAAATGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp ACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCATTTACTCCTCCTaGAATGACTATATCATCTGG +
Preference number: 4 (lower is better)
Translates to: TDSRAGIQTLSTWPQSLNCIYSS*NDYIIW
Trigger: CCAGATGATATAGTCATTCCAGGAGGAGTAAATGCA...GTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp CTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGTGCATTTACTCCTCCTaGAATGACTATATCATCTGG +
Preference number: 4 (lower is better)
Translates to: LTDSRAGIQTLSTWPQSLCIYSS*NDYIIW
Trigger: CCAGATGATATAGTCATTCCAGGAGGAGTAAATGCA...CAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTTGGCCTCTGTGCCATTaGTTGCATTTACTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPWPLCH*LHLLLL
Trigger: CAGGAGGAGTAAATGCAACCAATGGCACAGAGGCCA...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp CAAAGTTCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCCTCTCAAGGCATCTCTaGCCTCTGTGCCATTGGTTG +
Preference number: 4 (lower is better)
Translates to: QSSEVLSDLAEVTPLTDSLSRHL*PLCHWL
Trigger: CAACCAATGGCACAGAGGCCAGAGATGCCTTGAGAG...GGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGAACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACCTCTCAAGGCATCTCTaGCCTCTGTGCCATTGGTTG +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYLSRHL*PLCHWL
Trigger: CAACCAATGGCACAGAGGCCAGAGATGCCTTGAGAG...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCTCTCAAGGCATCTCTaGCCTCTGTGCCATTGGTTG +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWLSRHL*PLCHWL
Trigger: CAACCAATGGCACAGAGGCCAGAGATGCCTTGAGAG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGTCTACGTACACAAGGTaGAAGAGGCTGGTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWSTYTR*KRLVSG
Trigger: TCCGGACACCAGCCTCTTCCACCTTGTGTACGTAGA...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTTCTACGTACACAAGGTaGAAGAGGCTGGTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTSTYTR*KRLVSG
Trigger: TCCGGACACCAGCCTCTTCCACCTTGTGTACGTAGA...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp ATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTATCCAACGATGGCTATaGCAATGGCATCTACGTACA +
Preference number: 4 (lower is better)
Translates to: MAFLLAPMMTAGFTPVFRIQRWL*QWHLRT
Trigger: TGTACGTAGATGCCATTGCCATAGCCATCGTTGGAT...ACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423416.5
ENST00000456463.5
CDS-3UTR CCA 90 bp AGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGGATTACTGAAAATCCAACGATaGCTATGGCAATGGCATCTA +
Preference number: 4 (lower is better)
Translates to: SWHSNPVHLAPKPELLGLLKIQR*LWQWHL
Trigger: TAGATGCCATTGCCATAGCCATCGTTGGATTTTCAG...TAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACGGAAGAGTGAGCCAATaGAATTGCACAGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYGRVSQ*NCTVPG
Trigger: CCCTGGGACTGTGCAATTCCATTGGCTCACTCTTCC...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp CTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGGAAATTGAAAAGGTCTaGAAGAGTGAGCCAATGGAA +
Preference number: 4 (lower is better)
Translates to: LTDSRAGIQTLSTWPQSLEIEKV*KSEPME
Trigger: TTCCATTGGCTCACTCTTCCAGACCTTTTCAATTTC...CAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCGAAATTGAAAAGGTCTaGAAGAGTGAGCCAATGGAA +
Preference number: 4 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSEIEKV*KSEPME
Trigger: TTCCATTGGCTCACTCTTCCAGACCTTTTCAATTTC...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTTCCCATGATGACTGCTaGGTTCACTCCAGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPSHDDC*VHSSLS
Trigger: CGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGA...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR CCA 90 bp TGGCCGACAGCACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTAATAGTGGACGTTATCCCCTaGGGGCATAAATCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: WPTAQPGAMIQRGIQLLIVDVIP*GHKSLH
Trigger: ATGCAAAGATTTATGCCCCCAGGGGATAACGTCCAC...TATTAGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTGCTGTCGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp GCATCTGCTTTGACAACAGTTGCGTTGGCCATATTTGCATTTCCGACTTCCTTATCTATGCCTCAGGAGTaGCAGGAGTGGCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: ASALTTVALAIFAFPTSLSMPQE*QEWHWA
Trigger: AGCCCAATGCCACTCCTGCCACTCCTGAGGCATAGA...TAAGGAAGTCGGAAATGCAAATATGGCCAACGCAACTGTTGTCAAAGCAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
3UTR CAA 72 bp GCTCCTGATTGCCGTCAACCTGGTAGCCATGTTTATTaGCTAAGGTCTTGGCCATGGAGATGGTCACTGAAA +
Preference number: 4 (lower is better)
Translates to: APDCRQPGSHVY*LRSWPWRWSLK
Trigger: TTTCAGTGACCATCTCCATGGCCAAGACCTTAGCAAATAAACATGGCTACCAGGTTGACGGCAATCAGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR TCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACAGTTCACTGAAGCCTTaGTCACTGAGGCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYSSLKP*SLRLRA
Trigger: TGCTCTCAGCCTCAGTGATCAAGGCTTCAGTGAACT...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGAGACAAGCATTTCCTaGGTGTCACCAGATCCAATG +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPETSIS*VSPDPM
Trigger: CATTGGATCTGGTGACACTCAGGAAATGCTTGTCTC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp CTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGGATAACAGGGTAAAATaGAGAGTACAGGCCAAATAT +
Preference number: 4 (lower is better)
Translates to: LTDSRAGIQTLSTWPQSLDNRVK*RVQAKY
Trigger: ATATTTGGCCTGTACTCTTCATTTTACCCTGTTATC...CAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGGATAACAGGGTAAAATaGAGAGTACAGGCCAAATAT +
Preference number: 4 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWDNRVK*RVQAKY
Trigger: ATATTTGGCCTGTACTCTTCATTTTACCCTGTTATC...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTCTAGGCAAAACTGAATaGTTCCTGAAAGTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPLGKTE*FLKVRS
Trigger: TGACCTTACTTTCAGGAATCATTCAGTTTTGCCTAG...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp GCTGAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCGACATCCACATTGTATaGTTCTTTCAAGTTAAACCC +
Preference number: 4 (lower is better)
Translates to: AEVTPLTDSRAGIQTLSTDIHIV*FFQVKP
Trigger: GGGTTTAACTTGAAAGAATCATACAATGTGGATGTC...GGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp AATATGACCAGCAGAATCATTAATGAGGCCAAACAACCTGCAAGCTGTGTCTTCACAGTCCCAGGGCAATaGGCTCCTGATTGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: NMTSRIINEAKQPASCVFTVPGQ*APDCRQ
Trigger: TTGACGGCAATCAGGAGCTCATTGCCCTGGGACTGT...GAAGACACAGCTTGCAGGTTGTTTGGCCTCATTAATGATTCTGCTGGTCATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR TCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTAAAGGTCTGGAAGAGTaGGCCAATGGAATTGCACAG +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPKGLEE*ANGIAQ
Trigger: CTGTGCAATTCCATTGGCTCACTCTTCCAGACCTTT...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGATCCAGTTGCTAATATaGCCAGCAGAATCATTAATG +
Preference number: 4 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWIQLLI*PAESLM
Trigger: CATTAATGATTCTGCTGGTCATATTAGCAACTGGAT...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR TCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCACAGCCTGGGGCAATaGTTCAAAGAGGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWHSLGQ*FKEESS
Trigger: ACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000445809.5
CDS-3UTR TCA 90 bp AGCACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTAATATGACCAGCACATTCCCTTCAGGTTaGCAATCACAATGGCCGACA +
Preference number: 4 (lower is better)
Translates to: STAWGNDSKRNPVANMTSTFPSG*QSQWPT
Trigger: TGTCGGCCATTGTGATTGTCAACCTGAAGGGAATGT...GCTGGTCATATTAGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR TCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCCTAAAACTGCATCATaGATGCTGTGGAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPPKTAS*MLWNSS
Trigger: GCTGCTGTTCCACAGCATTCATGATGCAGTTTTAGG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGATGGTCTGGGGCAATaGTTCAAAGAGGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPDGLGQ*FKEESS
Trigger: ACTGGATTCCTCTTTGAATCATTGCCCCAGACCATC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393730.5
ENST00000432958.6
CDS-3UTR GCA 90 bp CACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCATTCCTTGAATTTGTATaGTGGCAGCCATTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: HPTNRFQSWHSNPVHLAPFLEFV*WQPFSY
Trigger: ATAACTAAATGGCTGCCAGCATACAAATTCAAGGAA...TGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp ATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCGACATGCACAGCTGCTaGGGTGGTAAACCCACGGAC +
Preference number: 4 (lower is better)
Translates to: IYTDVSIFFYNPCQSFHSDMHSC*GGKPTD
Trigger: GTCCGTGGGTTTACCACCGCAGCAGCTGTGCATGTC...GGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp AGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGGATTAATCTACTTCTGCATCTaGTTTGACAACAGTTGCGTT +
Preference number: 4 (lower is better)
Translates to: SWHSNPVHLAPKPELLGLIYFCI*FDNSCV
Trigger: AACGCAACTGTTGTCAAAGCAGATGCAGAAGTAGAT...TAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339444.10
CDS-3UTR GCA 90 bp TGGCTATGGCAATGGCATCTACGTACACAAGGTGGAAGAGGCTGGTGTCCGGATTTCTTTTACAATCCCTaGCAGAGTTTTCACTCCAAC +
Preference number: 4 (lower is better)
Translates to: WLWQWHLRTQGGRGWCPDFFYNP*QSFHSN
Trigger: GTTGGAGTGAAAACTCTGGCAGGGATTGTAAAAGAA...ATCCGGACACCAGCCTCTTCCACCTTGTGTACGTAGATGCCATTGCCATAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR GCA 90 bp AATGACAGTGTGGACGTTATCCCCTGGGGGCATAAATCTTTGCATTTCCTCAGGAAACTGCATCATGAATaGTGTGGAACAGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: NDSVDVIPWGHKSLHFLRKLHHE*CGTAAP
Trigger: GGGAGCTGCTGTTCCACAGCATTCATGATGCAGTTT...CCTGAGGAAATGCAAAGATTTATGCCCCCAGGGGATAACGTCCACACTGTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTAAACTGCATCATGAATaGTGTGGAACAGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPKLHHE*CGTAAP
Trigger: GGGAGCTGCTGTTCCACAGCATTCATGATGCAGTTT...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGTTCCTGTTCAGCAAGTaGCTCTCTAAGTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWFLFSK*LSKLAA
Trigger: GGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAA...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp AGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGGATTACTTGAATTTGTATGCTaGCAGCCATTTAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: SWHSNPVHLAPKPELLGLLEFVC*QPFSYG
Trigger: CCCATAACTAAATGGCTGCCAGCATACAAATTCAAG...TAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp GCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTGCCTAAAACTGCACTTGAATTTGTATGCTaGCAGCCATTTAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: AEASCSASASLSWLPKTALEFVC*QPFSYG
Trigger: CCCATAACTAAATGGCTGCCAGCATACAAATTCAAG...TGCAGTTTTAGGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACGTACAGGCCAAATATTaGAGGCACAGCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYVQAKY*RHSCQH
Trigger: ATGCTGGCAGCTGTGCCTCCAATATTTGGCCTGTAC...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGTACAGGCCAAATATTaGAGGCACAGCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWVQAKY*RHSCQH
Trigger: ATGCTGGCAGCTGTGCCTCCAATATTTGGCCTGTAC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp CTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGCTATGGATATGTGTCTaGAGGTTCCAAGAAAACAAT +
Preference number: 4 (lower is better)
Translates to: LTDSRAGIQTLSTWPQSLLWICV*RFQENN
Trigger: ATTGTTTTCTTGGAACCTCCAGACACATATCCATAG...CAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp TTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTCTATGGATATGTGTCTaGAGGTTCCAAGAAAACAAT +
Preference number: 4 (lower is better)
Translates to: FQSWHSNPVHLAPKPELLLWICV*RFQENN
Trigger: ATTGTTTTCTTGGAACCTCCAGACACATATCCATAG...AAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp AGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGGATTATGCATTTACTCCTCCTaGAATGACTATATCATCTGG +
Preference number: 4 (lower is better)
Translates to: SWHSNPVHLAPKPELLGLCIYSS*NDYIIW
Trigger: CCAGATGATATAGTCATTCCAGGAGGAGTAAATGCA...TAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTTGGCCTCTGTGCCATTaGTTGCATTTACTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTWPLCH*LHLLLL
Trigger: CAGGAGGAGTAAATGCAACCAATGGCACAGAGGCCA...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp CCTGGTAGCCATGTTTATTTGCTAAGGTCTTGGCCATGGAGATGGTCACTGAAATGGCCTCTGTGCCATTaGTTGCATTTACTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PGSHVYLLRSWPWRWSLKWPLCH*LHLLLL
Trigger: CAGGAGGAGTAAATGCAACCAATGGCACAGAGGCCA...TTTCAGTGACCATCTCCATGGCCAAGACCTTAGCAAATAAACATGGCTACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR CCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCAAGGTGGAAGAGGCTaGTGTCCGGATTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSQGGRG*CPDWLE
Trigger: CTCCAGCCAATCCGGACACCAGCCTCTTCCACCTTG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp AGCCCTAGAGGAAGTGTTCCAACGACATCCACATTGTATGATTCTTTCAAGTTACAAGGTGGAAGAGGCTaGTGTCCGGATTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SPRGSVPTTSTLYDSFKLQGGRG*CPDWLE
Trigger: CTCCAGCCAATCCGGACACCAGCCTCTTCCACCTTG...TAACTTGAAAGAATCATACAATGTGGATGTCGTTGGAACACTTCCTCTAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCGATGGCTATGGCAATaGCATCTACGTACACAAGGT +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPRWLWQ*HLRTQG
Trigger: ACCTTGTGTACGTAGATGCCATTGCCATAGCCATCG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp AATATGACCAGCAGAATCATTAATGAGGCCAAACAACCTGCAAGCTGTGTCTTCGCCGACAGCACAGCCTaGGGCAATGATTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: NMTSRIINEAKQPASCVFADSTA*GNDSKR
Trigger: CCTCTTTGAATCATTGCCCCAGGCTGTGCTGTCGGC...GAAGACACAGCTTGCAGGTTGTTTGGCCTCATTAATGATTCTGCTGGTCATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGTCCCATGATGACTGCTaGGTTCACTCCAGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWSHDDC*VHSSLS
Trigger: CGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGA...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR CCA 90 bp GCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTATCCCATGATGACTGCTaGGTTCACTCCAGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: APMMTAGFTPVFRFNALLSHDDC*VHSSLS
Trigger: CGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGA...TAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGTGGACGTTATCCCCTaGGGGCATAAATCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPVDVIP*GHKSLH
Trigger: ATGCAAAGATTTATGCCCCCAGGGGATAACGTCCAC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp AAAATCCAACGATGGCTATGGCAATGGCATCTACGTACACAAGGTGGAAGAGGCGTGGACGTTATCCCCTaGGGGCATAAATCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: KIQRWLWQWHLRTQGGRGVDVIP*GHKSLH
Trigger: ATGCAAAGATTTATGCCCCCAGGGGATAACGTCCAC...GCCTCTTCCACCTTGTGTACGTAGATGCCATTGCCATAGCCATCGTTGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR CCA 90 bp TCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCAGAGCTAACAGATTCCAGAGCTaGCATTCAAACCCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SEVLSDLAEVTPLTDSRANRFQS*HSNPVH
Trigger: GTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTT...AGCTCTGGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR TCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGAGACAAGCATTTCCTaGGTGTCACCAGATCCAATG +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWETSIS*VSPDPM
Trigger: CATTGGATCTGGTGACACTCAGGAAATGCTTGTCTC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCCCTGTGCTTATGCCTaGGACCAAGTCACCCAACAC +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSPCAYA*DQVTQH
Trigger: GTGTTGGGTGACTTGGTCTCAGGCATAAGCACAGGG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCAAGTTAAACCCAGCTaGAATGCCAGTTCCCATTAC +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPQVKPS*NASSHY
Trigger: GTAATGGGAACTGGCATTTCAGCTGGGTTTAACTTG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCATGGAGATGGTCACTaGAAATCCAACGATGGCTAT +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPHGDGH*KSNDGY
Trigger: ATAGCCATCGTTGGATTTTCAGTGACCATCTCCATG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR TCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTAAAGGTCTGGAAGAGTaGGCCAATGGAATTGCACAG +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTKGLEE*ANGIAQ
Trigger: CTGTGCAATTCCATTGGCTCACTCTTCCAGACCTTT...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGAAAGGTCTGGAAGAGTaGGCCAATGGAATTGCACAG +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWKGLEE*ANGIAQ
Trigger: CTGTGCAATTCCATTGGCTCACTCTTCCAGACCTTT...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACAAAGGTCTGGAAGAGTaGGCCAATGGAATTGCACAG +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYKGLEE*ANGIAQ
Trigger: CTGTGCAATTCCATTGGCTCACTCTTCCAGACCTTT...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTATCCAGTTGCTAATATaGCCAGCAGAATCATTAATG +
Preference number: 4 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPIQLLI*PAESLM
Trigger: CATTAATGATTCTGCTGGTCATATTAGCAACTGGAT...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR TCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACACATTCCCTTCAGGTTaGCAATCACAATGGCCGACA +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYTFPSG*QSQWPT
Trigger: TGTCGGCCATTGTGATTGTCAACCTGAAGGGAATGT...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000445809.5
CDS-3UTR TCA 90 bp AGGCTTCGAGACAAGGAGCATGAAATTGAAAAGGTCTGGAAGAGTGAGCCAATGACATTCCCTTCAGGTTaGCAATCACAATGGCCGACA +
Preference number: 4 (lower is better)
Translates to: RLRDKEHEIEKVWKSEPMTFPSG*QSQWPT
Trigger: TGTCGGCCATTGTGATTGTCAACCTGAAGGGAATGT...CATTGGCTCACTCTTCCAGACCTTTTCAATTTCATGCTCCTTGTCTCGAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR TCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACCCTAAAACTGCATCATaGATGCTGTGGAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYPKTAS*MLWNSS
Trigger: GCTGCTGTTCCACAGCATTCATGATGCAGTTTTAGG...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCCTAAAACTGCATCATaGATGCTGTGGAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWPKTAS*MLWNSS
Trigger: GCTGCTGTTCCACAGCATTCATGATGCAGTTTTAGG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCAACCCCATCCTAGGGTaGGGTCCTCATCTATGCCTC +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSNPILG*GPHLCL
Trigger: GAGGCATAGATGAGGACCTCACCCTAGGATGGGGTT...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACGATGGTCTGGGGCAATaGTTCAAAGAGGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYDGLGQ*FKEESS
Trigger: ACTGGATTCCTCTTTGAATCATTGCCCCAGACCATC...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393730.5
ENST00000432958.6
CDS-3UTR GCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTTCACCAGATCCAATGTaGAGCACAAAAGTCGGGACA +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTSPDPM*STKVGT
Trigger: TGTCCCGACTTTTGTGCTGCACATTGGATCTGGTGA...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTAGGAGTACATGTGAATaGCTGTTTCAGCTTATCCGC +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPRSTCE*LFQLIR
Trigger: GCGGATAAGCTGAAACAGGCATTCACATGTACTCCT...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp ACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTTCCTTGAATTTGTATaGTGGCAGCCATTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: TDSRAGIQTLSTWPQSLNFLEFV*WQPFSY
Trigger: ATAACTAAATGGCTGCCAGCATACAAATTCAAGGAA...GTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGTTCCTTGAATTTGTATaGTGGCAGCCATTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWFLEFV*WQPFSY
Trigger: ATAACTAAATGGCTGCCAGCATACAAATTCAAGGAA...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCGCACCCCTGTGCTTATaGCTGAGACCAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSAPLCL*LRPSHP
Trigger: TGGGTGACTTGGTCTCAGGCATAAGCACAGGGGTGC...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp CAGTTTCAGGAAGCTTTCCAAGGACTTTGTAGCTTGGACTCTGTGTTCTGTAAAGCTGAAGCACCCCTGTaGTTATGCCTGAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: QFQEAFQGLCSLDSVFCKAEAPL*LCLRPS
Trigger: ACTTGGTCTCAGGCATAAGCACAGGGGTGCTTCAGC...TTTACAGAACACAGAGTCCAAGCTACAAAGTCCTTGGAAAGCTTCCTGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR GCA 90 bp AATGACAGTGTGGACGTTATCCCCTGGGGGCATAAATCTTTGCATTTCCTCAGGCTCTGTGCCATTGGTTaGATTTACTCCTCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: NDSVDVIPWGHKSLHFLRLCAIG*IYSSWN
Trigger: ATTCCAGGAGGAGTAAATGCAACCAATGGCACAGAG...CCTGAGGAAATGCAAAGATTTATGCCCCCAGGGGATAACGTCCACACTGTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCGAAGACATGCACAGCTaGTGCGGTGGTAAACCCACG +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSEDMHS*CGGKPT
Trigger: CGTGGGTTTACCACCGCAGCAGCTGTGCATGTCTTC...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp ACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGGTTTTTAACATTCTaGAACACAGCAACTGTACTA +
Preference number: 4 (lower is better)
Translates to: TPLTDSRAGIQTLSTWPQRFLTF*NTATVL
Trigger: TAGTACAGTTGCTGTGTTGCAGAATGTTAAAAACCT...TTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp ACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACAGGTTTTTAACATTCTaGAACACAGCAACTGTACTA +
Preference number: 4 (lower is better)
Translates to: TDSRAGIQTLSTWPQSLNRFLTF*NTATVL
Trigger: TAGTACAGTTGCTGTGTTGCAGAATGTTAAAAACCT...GTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp TTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTAGGTTTTTAACATTCTaGAACACAGCAACTGTACTA +
Preference number: 4 (lower is better)
Translates to: FQSWHSNPVHLAPKPELLRFLTF*NTATVL
Trigger: TAGTACAGTTGCTGTGTTGCAGAATGTTAAAAACCT...AAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR GCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTTGCGTTGGCCATATTTaGATTTCCGACTTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPCVGHI*ISDFLS
Trigger: GCTAAGGAAGTCGGAAATGCAAATATGGCCAACGCA...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR GCA 90 bp AGCACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTAATATGACCAGCTGCGTTGGCCATATTTaGATTTCCGACTTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: STAWGNDSKRNPVANMTSCVGHI*ISDFLS
Trigger: GCTAAGGAAGTCGGAAATGCAAATATGGCCAACGCA...GCTGGTCATATTAGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp ACAATGGCCGACAGCACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTATCTACTTCTGCATCTaGTTTGACAACAGTTGCGTT +
Preference number: 4 (lower is better)
Translates to: TMADSTAWGNDSKRNPVAIYFCI*FDNSCV
Trigger: AACGCAACTGTTGTCAAAGCAGATGCAGAAGTAGAT...AGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTGCTGTCGGCCATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp TTTGCATTTCCGACTTCCTTAGCGTACTTCCGCATGGCCTTTCTCCTTGCTCCCATCTACTTCTGCATCTaGTTTGACAACAGTTGCGTT +
Preference number: 4 (lower is better)
Translates to: FAFPTSLAYFRMAFLLAPIYFCI*FDNSCV
Trigger: AACGCAACTGTTGTCAAAGCAGATGCAGAAGTAGAT...GGGAGCAAGGAGAAAGGCCATGCGGAAGTACGCTAAGGAAGTCGGAAATGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp ACAATGGCCGACAGCACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTTCACAACTTGTGCACTaGATCCTGCTAAGTATACAT +
Preference number: 4 (lower is better)
Translates to: TMADSTAWGNDSKRNPVASQLVH*ILLSIH
Trigger: ATGTATACTTAGCAGGATGCAGTGCACAAGTTGTGA...AGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTGCTGTCGGCCATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTAAACTGCATCATGAATaGTGTGGAACAGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTKLHHE*CGTAAP
Trigger: GGGAGCTGCTGTTCCACAGCATTCATGATGCAGTTT...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACAAACTGCATCATGAATaGTGTGGAACAGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYKLHHE*CGTAAP
Trigger: GGGAGCTGCTGTTCCACAGCATTCATGATGCAGTTT...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGAAACTGCATCATGAATaGTGTGGAACAGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWKLHHE*CGTAAP
Trigger: GGGAGCTGCTGTTCCACAGCATTCATGATGCAGTTT...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTTCAGCTTATCCGCAATaGAATCAGGAACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPSAYPQ*NQEPCP
Trigger: AGGACAAGGTTCCTGATTCCATTGCGGATAAGCTGA...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp TCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCAGAGCTTCAGCTTATCCGCAATaGAATCAGGAACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SEVLSDLAEVTPLTDSRASAYPQ*NQEPCP
Trigger: AGGACAAGGTTCCTGATTCCATTGCGGATAAGCTGA...AGCTCTGGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp AATGACAGTGTGGACGTTATCCCCTGGGGGCATAAATCTTTGCATTTCCTCAGGTCAGCTTATCCGCAATaGAATCAGGAACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: NDSVDVIPWGHKSLHFLRSAYPQ*NQEPCP
Trigger: AGGACAAGGTTCCTGATTCCATTGCGGATAAGCTGA...CCTGAGGAAATGCAAAGATTTATGCCCCCAGGGGATAACGTCCACACTGTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCAGCAAAAGGACCTATaGATATGTGTCTGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPQQKDL*ICVWRF
Trigger: GAACCTCCAGACACATATCCATAGGTCCTTTTGCTG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp GGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTTTTGCATTTACTCCTCCTaGAATGACTATATCATCTGG +
Preference number: 4 (lower is better)
Translates to: GLSPCSHDDCWVHSSLSFCIYSS*NDYIIW
Trigger: CCAGATGATATAGTCATTCCAGGAGGAGTAAATGCA...AAACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGTAAGGTCACAGACATaGCGACTTTCACTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWVRSQT*RLSLSR
Trigger: CCTTGAGAGTGAAAGTCGCCATGTCTGTGACCTTAC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACGTAAGGTCACAGACATaGCGACTTTCACTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYVRSQT*RLSLSR
Trigger: CCTTGAGAGTGAAAGTCGCCATGTCTGTGACCTTAC...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp TGTGCACTGCATCCTGCTAAGTATACATATATACCGACGTCTCCATATTCTTTTCAAGGTGGAAGAGGCTaGTGTCCGGATTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: CALHPAKYTYIPTSPYSFQGGRG*CPDWLE
Trigger: CTCCAGCCAATCCGGACACCAGCCTCTTCCACCTTG...AAAAGAATATGGAGACGTCGGTATATATGTATACTTAGCAGGATGCAGTGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp GTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCAACAGAATCAATCAAGGTGGAAGAGGCTaGTGTCCGGATTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VSIFFYNPCQSFHSNRINQGGRG*CPDWLE
Trigger: CTCCAGCCAATCCGGACACCAGCCTCTTCCACCTTG...ATTGATTCTGTTGGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTATCCAACGATGGCTATaGCAATGGCATCTACGTACA +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPIQRWL*QWHLRT
Trigger: TGTACGTAGATGCCATTGCCATAGCCATCGTTGGAT...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTTATTTGCTAAGGTCTTaGCCATGGAGATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPYLLRS*PWRWSL
Trigger: CAGTGACCATCTCCATGGCCAAGACCTTAGCAAATA...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCGCCGACAGCACAGCCTaGGGCAATGATTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSADSTA*GNDSKR
Trigger: CCTCTTTGAATCATTGCCCCAGGCTGTGCTGTCGGC...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000445809.5
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACGTGGACGTTATCCCCTaGGGGCATAAATCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYVDVIP*GHKSLH
Trigger: ATGCAAAGATTTATGCCCCCAGGGGATAACGTCCAC...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTGTGGACGTTATCCCCTaGGGGCATAAATCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTVDVIP*GHKSLH
Trigger: ATGCAAAGATTTATGCCCCCAGGGGATAACGTCCAC...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGTGGACGTTATCCCCTaGGGGCATAAATCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWVDVIP*GHKSLH
Trigger: ATGCAAAGATTTATGCCCCCAGGGGATAACGTCCAC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp ATACATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCATGGCAGGAGTGGCATTaGGCTCCAAGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: IHIYRRLHILLQSLPEFSWQEWH*APSPPG
Trigger: CCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCA...TGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCTCTATGCCTCAGGAGTaGCAGGAGTGGCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSSMPQE*QEWHWA
Trigger: AGCCCAATGCCACTCCTGCCACTCCTGAGGCATAGA...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTGTAAGCCAGATGGTCTaGGGCAATGATTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTVSQMV*GNDSKR
Trigger: CCTCTTTGAATCATTGCCCCAGACCATCTGGCTTAC...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393730.5
ENST00000432958.6
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGTAAGCCAGATGGTCTaGGGCAATGATTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWVSQMV*GNDSKR
Trigger: CCTCTTTGAATCATTGCCCCAGACCATCTGGCTTAC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393730.5
ENST00000432958.6
CDS-3UTR TCA 90 bp GCATCTGCTTTGACAACAGTTGCGTTGGCCATATTTGCATTTCCGACTTCCTTAGAGACAAGCATTTCCTaGGTGTCACCAGATCCAATG +
Preference number: 4 (lower is better)
Translates to: ASALTTVALAIFAFPTSLETSIS*VSPDPM
Trigger: CATTGGATCTGGTGACACTCAGGAAATGCTTGTCTC...TAAGGAAGTCGGAAATGCAAATATGGCCAACGCAACTGTTGTCAAAGCAGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR TCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCTCCTGGAGGACCGGATaGCTAAAGATAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSSWRTG*LKIGLS
Trigger: GGAAAGGCCTATCTTTAGTCATCCGGTCCTCCAGGA...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp TGTGCACTGCATCCTGCTAAGTATACATATATACCGACGTCTCCATATTCTTTTCCCTGTGCTTATGCCTaGGACCAAGTCACCCAACAC +
Preference number: 4 (lower is better)
Translates to: CALHPAKYTYIPTSPYSFPCAYA*DQVTQH
Trigger: GTGTTGGGTGACTTGGTCTCAGGCATAAGCACAGGG...AAAAGAATATGGAGACGTCGGTATATATGTATACTTAGCAGGATGCAGTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCAAGTTAAACCCAGCTaGAATGCCAGTTCCCATTAC +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWQVKPS*NASSHY
Trigger: GTAATGGGAACTGGCATTTCAGCTGGGTTTAACTTG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACCAAGTTAAACCCAGCTaGAATGCCAGTTCCCATTAC +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYQVKPS*NASSHY
Trigger: GTAATGGGAACTGGCATTTCAGCTGGGTTTAACTTG...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp GGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTTTGACATCCACATTGTATaGTTCTTTCAAGTTAAACCC +
Preference number: 4 (lower is better)
Translates to: GLSPCSHDDCWVHSSLSFDIHIV*FFQVKP
Trigger: GGGTTTAACTTGAAAGAATCATACAATGTGGATGTC...AAACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR TCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTCATGGAGATGGTCACTaGAAATCCAACGATGGCTAT +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTHGDGH*KSNDGY
Trigger: ATAGCCATCGTTGGATTTTCAGTGACCATCTCCATG...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR TCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGAAAAAGGGGAGATCTaGGAACTGCATAAACATTCC +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPEKGEI*ELHKHS
Trigger: GGAATGTTTATGCAGTTCTCAGATCTCCCCTTTTTC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000445809.5
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGAGGAGTACATGTGAATaGCTGTTTCAGCTTATCCGC +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWRSTCE*LFQLIR
Trigger: GCGGATAAGCTGAAACAGGCATTCACATGTACTCCT...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAAAGGAGTACATGTGAATaGCTGTTTCAGCTTATCCGC +
Preference number: 4 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKRSTCE*LFQLIR
Trigger: GCGGATAAGCTGAAACAGGCATTCACATGTACTCCT...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp TGTGCACTGCATCCTGCTAAGTATACATATATACCGACGTCTCCATATTCTTTTGCACCCCTGTGCTTATaGCTGAGACCAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: CALHPAKYTYIPTSPYSFAPLCL*LRPSHP
Trigger: TGGGTGACTTGGTCTCAGGCATAAGCACAGGGGTGC...AAAAGAATATGGAGACGTCGGTATATATGTATACTTAGCAGGATGCAGTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCGCTGAAGCACCCCTGTaGTTATGCCTGAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSAEAPL*LCLRPS
Trigger: ACTTGGTCTCAGGCATAAGCACAGGGGTGCTTCAGC...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACCTCTGTGCCATTGGTTaGATTTACTCCTCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYLCAIG*IYSSWN
Trigger: ATTCCAGGAGGAGTAAATGCAACCAATGGCACAGAG...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp AGGCTTCGAGACAAGGAGCATGAAATTGAAAAGGTCTGGAAGAGTGAGCCAATGCTCTGTGCCATTGGTTaGATTTACTCCTCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: RLRDKEHEIEKVWKSEPMLCAIG*IYSSWN
Trigger: ATTCCAGGAGGAGTAAATGCAACCAATGGCACAGAG...CATTGGCTCACTCTTCCAGACCTTTTCAATTTCATGCTCCTTGTCTCGAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp CTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTATACAAGTCGCTATTTGATGGAGGTGAAGACATaGACAGCTGCTGCGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LGSLQSFVLMHCYTSRYLMEVKT*TAAAVV
Trigger: TACCACCGCAGCAGCTGTGCATGTCTTCACCTCCAT...CAAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp TGTTCTGTAAATCACAGTCAGCAGAGCAATGATCACAGCAGTGATCAAACCATAATGGAGGTGAAGACATaGACAGCTGCTGCGGTGGTA +
Preference number: 4 (lower is better)
Translates to: CSVNHSQQSNDHSSDQTIMEVKT*TAAAVV
Trigger: TACCACCGCAGCAGCTGTGCATGTCTTCACCTCCAT...TATGGTTTGATCACTGCTGTGATCATTGCTCTGCTGACTGTGATTTACAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACGGGAGATCTGAGAACTaGATAAACATTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYGRSEN*INIPFR
Trigger: CCTGAAGGGAATGTTTATGCAGTTCTCAGATCTCCC...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000445809.5
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGGGAGATCTGAGAACTaGATAAACATTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWGRSEN*INIPFR
Trigger: CCTGAAGGGAATGTTTATGCAGTTCTCAGATCTCCC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000445809.5
CDS-3UTR GCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCATGGCCTTTCTCCTTaGTCCCATGATGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSHGLSP*SHDDCW
Trigger: CCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR GCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTTGCGTTGGCCATATTTaGATTTCCGACTTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTCVGHI*ISDFLS
Trigger: GCTAAGGAAGTCGGAAATGCAAATATGGCCAACGCA...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR GCA 90 bp CTTTCACCTCTGTGTTCTGTAAATCACAGTCAGCAGAGCAATGATCACAGCAGTAAACTGCATCATGAATaGTGTGGAACAGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LSPLCSVNHSQQSNDHSSKLHHE*CGTAAP
Trigger: GGGAGCTGCTGTTCCACAGCATTCATGATGCAGTTT...ACTGCTGTGATCATTGCTCTGCTGACTGTGATTTACAGAACACAGAGGTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445809.5
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCTCTCCATCTACTTCTaGATCCTGTGTTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWLSIYF*ILCCFD
Trigger: GTCAAAGCAACACAGGATGCAGAAGTAGATGGAGAG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354356.8
CDS-3UTR CCA 90 bp ATACATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCAGACAAGATCCCCCGCTaGGAGCTCCAGTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: IHIYRRLHILLQSLPEFSDKIPR*ELQCSS
Trigger: TGAACTGCACTGGAGCTCCCAGCGGGGGATCTTGTC...TGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTTCAGCTTATCCGCAATaGAATCAGGAACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTSAYPQ*NQEPCP
Trigger: AGGACAAGGTTCCTGATTCCATTGCGGATAAGCTGA...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTCAGCTTATCCGCAATaGAATCAGGAACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYSAYPQ*NQEPCP
Trigger: AGGACAAGGTTCCTGATTCCATTGCGGATAAGCTGA...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp GTGAGGTCATTCACAACTTGTGCACTGCATCCTGCTAAGTATACATATATACCGGTACAGGCCAAATATTaGAGGCACAGCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: VRSFTTCALHPAKYTYIPVQAKY*RHSCQH
Trigger: ATGCTGGCAGCTGTGCCTCCAATATTTGGCCTGTAC...CGGTATATATGTATACTTAGCAGGATGCAGTGCACAAGTTGTGAATGACCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACCAGCAAAAGGACCTATaGATATGTGTCTGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYQQKDL*ICVWRF
Trigger: GAACCTCCAGACACATATCCATAGGTCCTTTTGCTG...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTCAGCAAAAGGACCTATaGATATGTGTCTGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTQQKDL*ICVWRF
Trigger: GAACCTCCAGACACATATCCATAGGTCCTTTTGCTG...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTCTCAAGGCATCTCTaGCCTCTGTGCCATTGGTTG +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSLSRHL*PLCHWL
Trigger: CAACCAATGGCACAGAGGCCAGAGATGCCTTGAGAG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACATCCAACGATGGCTATaGCAATGGCATCTACGTACA +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYIQRWL*QWHLRT
Trigger: TGTACGTAGATGCCATTGCCATAGCCATCGTTGGAT...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTCTTGGCCATGGAGATaGTCACTGAAAATCCAACGA +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYSWPWR*SLKIQR
Trigger: TCGTTGGATTTTCAGTGACCATCTCCATGGCCAAGA...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGTCTTGGCCATGGAGATaGTCACTGAAAATCCAACGA +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWSWPWR*SLKIQR
Trigger: TCGTTGGATTTTCAGTGACCATCTCCATGGCCAAGA...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTATTTGCTAAGGTCTTaGCCATGGAGATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYYLLRS*PWRWSL
Trigger: CAGTGACCATCTCCATGGCCAAGACCTTAGCAAATA...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAATATTTGCTAAGGTCTTaGCCATGGAGATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKYLLRS*PWRWSL
Trigger: CAGTGACCATCTCCATGGCCAAGACCTTAGCAAATA...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGTATTTGCTAAGGTCTTaGCCATGGAGATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWYLLRS*PWRWSL
Trigger: CAGTGACCATCTCCATGGCCAAGACCTTAGCAAATA...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp ACATTGTATGATTCTTTCAAGTTAAACCCAGCTGAAATGCCAGTTCCCATTACGGCCGACAGCACAGCCTaGGGCAATGATTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: TLYDSFKLNPAEMPVPITADSTA*GNDSKR
Trigger: CCTCTTTGAATCATTGCCCCAGGCTGTGCTGTCGGC...CGTAATGGGAACTGGCATTTCAGCTGGGTTTAACTTGAAAGAATCATACAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGAGTGCCTCTCTAAGTTaGCTGCCTAAAACTGCATCA +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWSASLS*LPKTAS
Trigger: TGATGCAGTTTTAGGCAGCCAACTTAGAGAGGCACT...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACAGTGCCTCTCTAAGTTaGCTGCCTAAAACTGCATCA +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYSASLS*LPKTAS
Trigger: TGATGCAGTTTTAGGCAGCCAACTTAGAGAGGCACT...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp TGTGCACTGCATCCTGCTAAGTATACATATATACCGACGTCTCCATATTCTTTTTCTATGCCTCAGGAGTaGCAGGAGTGGCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: CALHPAKYTYIPTSPYSFSMPQE*QEWHWA
Trigger: AGCCCAATGCCACTCCTGCCACTCCTGAGGCATAGA...AAAAGAATATGGAGACGTCGGTATATATGTATACTTAGCAGGATGCAGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCAGTTCACTGAAGCCTTaGTCACTGAGGCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSSSLKP*SLRLRA
Trigger: TGCTCTCAGCCTCAGTGATCAAGGCTTCAGTGAACT...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp ATACATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACCCTGTGCTTATGCCTaGGACCAAGTCACCCAACAC +
Preference number: 4 (lower is better)
Translates to: IHIYRRLHILLQSLPEFSPCAYA*DQVTQH
Trigger: GTGTTGGGTGACTTGGTCTCAGGCATAAGCACAGGG...TGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCTAGGCAAAACTGAATaGTTCCTGAAAGTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPLGKTE*FLKVRS
Trigger: TGACCTTACTTTCAGGAATCATTCAGTTTTGCCTAG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTACACCTAGGCAAAACTaGATGATTCCTGAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPTPRQN*MIPESK
Trigger: CTTACTTTCAGGAATCATTCAGTTTTGCCTAGGTGT...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp TGGCCGACAGCACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTAATAGACATCCACATTGTATaGTTCTTTCAAGTTAAACCC +
Preference number: 4 (lower is better)
Translates to: WPTAQPGAMIQRGIQLLIDIHIV*FFQVKP
Trigger: GGGTTTAACTTGAAAGAATCATACAATGTGGATGTC...TATTAGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTGCTGTCGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR TCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGAAAAAGGGGAGATCTaGGAACTGCATAAACATTCC +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWEKGEI*ELHKHS
Trigger: GGAATGTTTATGCAGTTCTCAGATCTCCCCTTTTTC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000445809.5
CDS-3UTR TCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTGAAAAAGGGGAGATCTaGGAACTGCATAAACATTCC +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTEKGEI*ELHKHS
Trigger: GGAATGTTTATGCAGTTCTCAGATCTCCCCTTTTTC...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000445809.5
CDS-3UTR TCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTAAAATCTATTCCGAGTaGGGTCATTCACAACTTGTG +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPKIYSE*GHSQLV
Trigger: CACAAGTTGTGAATGACCTCACTCGGAATAGATTTT...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp CCATCTACTTCTGCATCCTTTCGTTTTAATGCATTGCTATACAAGTCGCTATTTAACCCCATCCTAGGGTaGGGTCCTCATCTATGCCTC +
Preference number: 4 (lower is better)
Translates to: PSTSASFRFNALLYKSLFNPILG*GPHLCL
Trigger: GAGGCATAGATGAGGACCTCACCCTAGGATGGGGTT...AAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGGATGCAGAAGTAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454864.5
CDS-3UTR TCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCATCCTGTGTTGCTTTaGCAACAGTTGCGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSHPVLL*QQLRWP
Trigger: TGGCCAACGCAACTGTTGTCAAAGCAACACAGGATG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354356.8
CDS-3UTR GCA 90 bp AGCACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTAATATGACCAGCATAGTACCTCTGGGTTaGTGCAAGGATTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: STAWGNDSKRNPVANMTSIVPLG*CKDFIF
Trigger: GAAAATGAAATCCTTGCAGCAACCCAGAGGTACTAT...GCTGGTCATATTAGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp AATGACAGTGTGGACGTTATCCCCTGGGGGCATAAATCTTTGCATTTCCTCAGGATAGTACCTCTGGGTTaGTGCAAGGATTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: NDSVDVIPWGHKSLHFLRIVPLG*CKDFIF
Trigger: GAAAATGAAATCCTTGCAGCAACCCAGAGGTACTAT...CCTGAGGAAATGCAAAGATTTATGCCCCCAGGGGATAACGTCCACACTGTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp ACAATGGCCGACAGCACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTTTCCTTGAATTTGTATaGTGGCAGCCATTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: TMADSTAWGNDSKRNPVAFLEFV*WQPFSY
Trigger: ATAACTAAATGGCTGCCAGCATACAAATTCAAGGAA...AGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTGCTGTCGGCCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGGGGGCATAAATCTTTaGATTTCCTCAGGAAATGTG +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWGGINL*ISSGNV
Trigger: CACATTTCCTGAGGAAATGCAAAGATTTATGCCCCC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTGGGGGCATAAATCTTTaGATTTCCTCAGGAAATGTG +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTGGINL*ISSGNV
Trigger: CACATTTCCTGAGGAAATGCAAAGATTTATGCCCCC...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAAGGGGGCATAAATCTTTaGATTTCCTCAGGAAATGTG +
Preference number: 4 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKGGINL*ISSGNV
Trigger: CACATTTCCTGAGGAAATGCAAAGATTTATGCCCCC...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTTCACAACTTGTGCACTaGATCCTGCTAAGTATACAT +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPSQLVH*ILLSIH
Trigger: ATGTATACTTAGCAGGATGCAGTGCACAAGTTGTGA...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCTTCCTGTTCAGCAAGTaGCTCTCTAAGTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSFLFSK*LSKLAA
Trigger: GGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAA...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTTTCTGCATCCTGTGTTaGTTTGACAACAGTTGCGTT +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTFCILC*FDNSCV
Trigger: AACGCAACTGTTGTCAAAGCAACACAGGATGCAGAA...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354356.8
CDS-3UTR CCA 90 bp ATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCGTACAGGCCAAATATTaGAGGCACAGCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: IYTDVSIFFYNPCQSFHSVQAKY*RHSCQH
Trigger: ATGCTGGCAGCTGTGCCTCCAATATTTGGCCTGTAC...GGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTTGCATTTACTCCTCCTaGAATGACTATATCATCTGG +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPCIYSS*NDYIIW
Trigger: CCAGATGATATAGTCATTCCAGGAGGAGTAAATGCA...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp GCTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTATACAAGTCGCTATTTTGGCCTCTGTGCCATTaGTTGCATTTACTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: AGFTPVFRFNALLYKSLFWPLCH*LHLLLL
Trigger: CAGGAGGAGTAAATGCAACCAATGGCACAGAGGCCA...AAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp CCTCATATGCGTCTATATCAATATACACATCAGTTTCAGGAAGCTTTCCAAGGACTCTCAAGGCATCTCTaGCCTCTGTGCCATTGGTTG +
Preference number: 4 (lower is better)
Translates to: PHMRLYQYTHQFQEAFQGLSRHL*PLCHWL
Trigger: CAACCAATGGCACAGAGGCCAGAGATGCCTTGAGAG...TCCTTGGAAAGCTTCCTGAAACTGATGTGTATATTGATATAGACGCATATGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR CCA 90 bp GTGAGGTCATTCACAACTTGTGCACTGCATCCTGCTAAGTATACATATATACCGCGATGGCTATGGCAATaGCATCTACGTACACAAGGT +
Preference number: 4 (lower is better)
Translates to: VRSFTTCALHPAKYTYIPRWLWQ*HLRTQG
Trigger: ACCTTGTGTACGTAGATGCCATTGCCATAGCCATCG...CGGTATATATGTATACTTAGCAGGATGCAGTGCACAAGTTGTGAATGACCTCAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACCTGAAAATCCAACGATaGCTATGGCAATGGCATCTA +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYLKIQR*LWQWHL
Trigger: TAGATGCCATTGCCATAGCCATCGTTGGATTTTCAG...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTCTGAAAATCCAACGATaGCTATGGCAATGGCATCTA +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTLKIQR*LWQWHL
Trigger: TAGATGCCATTGCCATAGCCATCGTTGGATTTTCAG...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp CAAAGTTCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCCTGAAAATCCAACGATaGCTATGGCAATGGCATCTA +
Preference number: 4 (lower is better)
Translates to: QSSEVLSDLAEVTPLTDSLKIQR*LWQWHL
Trigger: TAGATGCCATTGCCATAGCCATCGTTGGATTTTCAG...GGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGAACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CCA 90 bp TGTGCACTGCATCCTGCTAAGTATACATATATACCGACGTCTCCATATTCTTTTGGAAGAGTGAGCCAATaGAATTGCACAGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: CALHPAKYTYIPTSPYSFGRVSQ*NCTVPG
Trigger: CCCTGGGACTGTGCAATTCCATTGGCTCACTCTTCC...AAAAGAATATGGAGACGTCGGTATATATGTATACTTAGCAGGATGCAGTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGAAATTGAAAAGGTCTaGAAGAGTGAGCCAATGGAA +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPEIEKV*KSEPME
Trigger: TTCCATTGGCTCACTCTTCCAGACCTTTTCAATTTC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCTCCCATGATGACTGCTaGGTTCACTCCAGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSSHDDC*VHSSLS
Trigger: CGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGA...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR TCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCGAGACAAGCATTTCCTaGGTGTCACCAGATCCAATG +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSETSIS*VSPDPM
Trigger: CATTGGATCTGGTGACACTCAGGAAATGCTTGTCTC...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp ATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCGAGACAAGCATTTCCTaGGTGTCACCAGATCCAATG +
Preference number: 4 (lower is better)
Translates to: IYTDVSIFFYNPCQSFHSETSIS*VSPDPM
Trigger: CATTGGATCTGGTGACACTCAGGAAATGCTTGTCTC...GGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp ATACATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCATCCTGGAGGACCGGATaGCTAAAGATAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: IHIYRRLHILLQSLPEFSSWRTG*LKIGLS
Trigger: GGAAAGGCCTATCTTTAGTCATCCGGTCCTCCAGGA...TGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGATAACAGGGTAAAATaGAGAGTACAGGCCAAATAT +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPDNRVK*RVQAKY
Trigger: ATATTTGGCCTGTACTCTTCATTTTACCCTGTTATC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCTAGGCAAAACTGAATaGTTCCTGAAAGTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWLGKTE*FLKVRS
Trigger: TGACCTTACTTTCAGGAATCATTCAGTTTTGCCTAG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTCTAGGCAAAACTGAATaGTTCCTGAAAGTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTLGKTE*FLKVRS
Trigger: TGACCTTACTTTCAGGAATCATTCAGTTTTGCCTAG...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACACCTAGGCAAAACTaGATGATTCCTGAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTTPRQN*MIPESK
Trigger: CTTACTTTCAGGAATCATTCAGTTTTGCCTAGGTGT...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACACCTAGGCAAAACTaGATGATTCCTGAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWTPRQN*MIPESK
Trigger: CTTACTTTCAGGAATCATTCAGTTTTGCCTAGGTGT...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGACATCCACATTGTATaGTTCTTTCAAGTTAAACCC +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPDIHIV*FFQVKP
Trigger: GGGTTTAACTTGAAAGAATCATACAATGTGGATGTC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp ATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCAAAGGTCTGGAAGAGTaGGCCAATGGAATTGCACAG +
Preference number: 4 (lower is better)
Translates to: IYTDVSIFFYNPCQSFHSKGLEE*ANGIAQ
Trigger: CTGTGCAATTCCATTGGCTCACTCTTCCAGACCTTT...GGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp AATGACAGTGTGGACGTTATCCCCTGGGGGCATAAATCTTTGCATTTCCTCAGGATCCAGTTGCTAATATaGCCAGCAGAATCATTAATG +
Preference number: 4 (lower is better)
Translates to: NDSVDVIPWGHKSLHFLRIQLLI*PAESLM
Trigger: CATTAATGATTCTGCTGGTCATATTAGCAACTGGAT...CCTGAGGAAATGCAAAGATTTATGCCCCCAGGGGATAACGTCCACACTGTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR TCA 90 bp ACATTGTATGATTCTTTCAAGTTAAACCCAGCTGAAATGCCAGTTCCCATTACGCACAGCCTGGGGCAATaGTTCAAAGAGGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: TLYDSFKLNPAEMPVPITHSLGQ*FKEESS
Trigger: ACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTG...CGTAATGGGAACTGGCATTTCAGCTGGGTTTAACTTGAAAGAATCATACAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR TCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTAAAATCTATTCCGAGTaGGGTCATTCACAACTTGTG +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTKIYSE*GHSQLV
Trigger: CACAAGTTGTGAATGACCTCACTCGGAATAGATTTT...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp CATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCCTAAAACTGCATCATaGATGCTGTGGAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: HIYRRLHILLQSLPEFSLPKTAS*MLWNSS
Trigger: GCTGCTGTTCCACAGCATTCATGATGCAGTTTTAGG...GAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp CGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCAACAGAATCAAGATGGTCTGGGGCAATaGTTCAAAGAGGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: RLHILLQSLPEFSLQQNQDGLGQ*FKEESS
Trigger: ACTGGATTCCTCTTTGAATCATTGCCCCAGACCATC...TTGATTCTGTTGGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423416.5
CDS-3UTR GCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACATAGTACCTCTGGGTTaGTGCAAGGATTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYIVPLG*CKDFIF
Trigger: GAAAATGAAATCCTTGCAGCAACCCAGAGGTACTAT...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTATAGTACCTCTGGGTTaGTGCAAGGATTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTIVPLG*CKDFIF
Trigger: GAAAATGAAATCCTTGCAGCAACCCAGAGGTACTAT...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp ATACATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCAATGGAGGTGAAGACATaGACAGCTGCTGCGGTGGTA +
Preference number: 4 (lower is better)
Translates to: IHIYRRLHILLQSLPEFSMEVKT*TAAAVV
Trigger: TACCACCGCAGCAGCTGTGCATGTCTTCACCTCCAT...TGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTGCTTTGACAACAGTTaGGTTGGCCATATTTGCATT +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYCFDNS*VGHICI
Trigger: AATGCAAATATGGCCAACGCAACTGTTGTCAAAGCA...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR GCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTTGCTTTGACAACAGTTaGGTTGGCCATATTTGCATT +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTCFDNS*VGHICI
Trigger: AATGCAAATATGGCCAACGCAACTGTTGTCAAAGCA...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGATCTACTTCTGCATCTaGTTTGACAACAGTTGCGTT +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWIYFCI*FDNSCV
Trigger: AACGCAACTGTTGTCAAAGCAGATGCAGAAGTAGAT...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306312.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR GCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACATCTACTTCTGCATCTaGTTTGACAACAGTTGCGTT +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYIYFCI*FDNSCV
Trigger: AACGCAACTGTTGTCAAAGCAGATGCAGAAGTAGAT...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306312.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR GCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTATCTACTTCTGCATCTaGTTTGACAACAGTTGCGTT +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTIYFCI*FDNSCV
Trigger: AACGCAACTGTTGTCAAAGCAGATGCAGAAGTAGAT...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306312.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGTTCTTTTACAATCCCTaGCAGAGTTTTCACTCCAAC +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWFFYNP*QSFHSN
Trigger: GTTGGAGTGAAAACTCTGGCAGGGATTGTAAAAGAA...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTTTCTTTTACAATCCCTaGCAGAGTTTTCACTCCAAC +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTFFYNP*QSFHSN
Trigger: GTTGGAGTGAAAACTCTGGCAGGGATTGTAAAAGAA...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTTCTTTTACAATCCCTaGCAGAGTTTTCACTCCAAC +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYFFYNP*QSFHSN
Trigger: GTTGGAGTGAAAACTCTGGCAGGGATTGTAAAAGAA...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGTCACAACTTGTGCACTaGATCCTGCTAAGTATACAT +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWSQLVH*ILLSIH
Trigger: ATGTATACTTAGCAGGATGCAGTGCACAAGTTGTGA...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp TGTGCACTGCATCCTGCTAAGTATACATATATACCGACGTCTCCATATTCTTTTTTCCTGTTCAGCAAGTaGCTCTCTAAGTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CALHPAKYTYIPTSPYSFFLFSK*LSKLAA
Trigger: GGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAA...AAAAGAATATGGAGACGTCGGTATATATGTATACTTAGCAGGATGCAGTGCACA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACCTTGAATTTGTATGCTaGCAGCCATTTAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYLEFVC*QPFSYG
Trigger: CCCATAACTAAATGGCTGCCAGCATACAAATTCAAG...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp CAAAGTTCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCCTTGAATTTGTATGCTaGCAGCCATTTAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: QSSEVLSDLAEVTPLTDSLEFVC*QPFSYG
Trigger: CCCATAACTAAATGGCTGCCAGCATACAAATTCAAG...GGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGAACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTCTTGAATTTGTATGCTaGCAGCCATTTAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTLEFVC*QPFSYG
Trigger: CCCATAACTAAATGGCTGCCAGCATACAAATTCAAG...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCTATGGATATGTGTCTaGAGGTTCCAAGAAAACAAT +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPLWICV*RFQENN
Trigger: ATTGTTTTCTTGGAACCTCCAGACACATATCCATAG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp TCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCAGAGCTCTATGGATATGTGTCTaGAGGTTCCAAGAAAACAAT +
Preference number: 4 (lower is better)
Translates to: SEVLSDLAEVTPLTDSRALWICV*RFQENN
Trigger: ATTGTTTTCTTGGAACCTCCAGACACATATCCATAG...AGCTCTGGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTTGCATTTACTCCTCCTaGAATGACTATATCATCTGG +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTCIYSS*NDYIIW
Trigger: CCAGATGATATAGTCATTCCAGGAGGAGTAAATGCA...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTGCATTTACTCCTCCTaGAATGACTATATCATCTGG +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYCIYSS*NDYIIW
Trigger: CCAGATGATATAGTCATTCCAGGAGGAGTAAATGCA...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAATGCATTTACTCCTCCTaGAATGACTATATCATCTGG +
Preference number: 4 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKCIYSS*NDYIIW
Trigger: CCAGATGATATAGTCATTCCAGGAGGAGTAAATGCA...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp TGTGCACTGCATCCTGCTAAGTATACATATATACCGACGTCTCCATATTCTTTTTGGCCTCTGTGCCATTaGTTGCATTTACTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: CALHPAKYTYIPTSPYSFWPLCH*LHLLLL
Trigger: CAGGAGGAGTAAATGCAACCAATGGCACAGAGGCCA...AAAAGAATATGGAGACGTCGGTATATATGTATACTTAGCAGGATGCAGTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCGTAAGGTCACAGACATaGCGACTTTCACTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSVRSQT*RLSLSR
Trigger: CCTTGAGAGTGAAAGTCGCCATGTCTGTGACCTTAC...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp TGTTCTGTAAATCACAGTCAGCAGAGCAATGATCACAGCAGTGATCAAACCATAGTAAGGTCACAGACATaGCGACTTTCACTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: CSVNHSQQSNDHSSDQTIVRSQT*RLSLSR
Trigger: CCTTGAGAGTGAAAGTCGCCATGTCTGTGACCTTAC...TATGGTTTGATCACTGCTGTGATCATTGCTCTGCTGACTGTGATTTACAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp CATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCGTAAGGTCACAGACATaGCGACTTTCACTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: HIYRRLHILLQSLPEFSLVRSQT*RLSLSR
Trigger: CCTTGAGAGTGAAAGTCGCCATGTCTGTGACCTTAC...GAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp GTCTATATCAATATACACATCAGTTTCAGGAAGCTTTCCAAGGACTTTGTAGCTTCTACGTACACAAGGTaGAAGAGGCTGGTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: VYINIHISFRKLSKDFVASTYTR*KRLVSG
Trigger: TCCGGACACCAGCCTCTTCCACCTTGTGTACGTAGA...AGCTACAAAGTCCTTGGAAAGCTTCCTGAAACTGATGTGTATATTGATATAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR CCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCGATGGCTATGGCAATaGCATCTACGTACACAAGGT +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSRWLWQ*HLRTQG
Trigger: ACCTTGTGTACGTAGATGCCATTGCCATAGCCATCG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp GCATCTGCTTTGACAACAGTTGCGTTGGCCATATTTGCATTTCCGACTTCCTTACTGAAAATCCAACGATaGCTATGGCAATGGCATCTA +
Preference number: 4 (lower is better)
Translates to: ASALTTVALAIFAFPTSLLKIQR*LWQWHL
Trigger: TAGATGCCATTGCCATAGCCATCGTTGGATTTTCAG...TAAGGAAGTCGGAAATGCAAATATGGCCAACGCAACTGTTGTCAAAGCAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423416.5
ENST00000456463.5
CDS-3UTR CCA 90 bp TATTTTACTTCACCATCCTCTTCTTCAGGCTTGGTAGCATCCTCTCCATCTACTTCTTGGCCATGGAGATaGTCACTGAAAATCCAACGA +
Preference number: 4 (lower is better)
Translates to: YFTSPSSSSGLVASSPSTSWPWR*SLKIQR
Trigger: TCGTTGGATTTTCAGTGACCATCTCCATGGCCAAGA...AGTAGATGGAGAGGATGCTACCAAGCCTGAAGAAGAGGATGGTGAAGTAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp CAGTTTCAGGAAGCTTTCCAAGGACTTTGTAGCTTGGACTCTGTGTTCTGTAAATCTTGGCCATGGAGATaGTCACTGAAAATCCAACGA +
Preference number: 4 (lower is better)
Translates to: QFQEAFQGLCSLDSVFCKSWPWR*SLKIQR
Trigger: TCGTTGGATTTTCAGTGACCATCTCCATGGCCAAGA...TTTACAGAACACAGAGTCCAAGCTACAAAGTCCTTGGAAAGCTTCCTGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR CCA 90 bp GTGAGGTCATTCACAACTTGTGCACTGCATCCTGCTAAGTATACATATATACCGTATTTGCTAAGGTCTTaGCCATGGAGATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: VRSFTTCALHPAKYTYIPYLLRS*PWRWSL
Trigger: CAGTGACCATCTCCATGGCCAAGACCTTAGCAAATA...CGGTATATATGTATACTTAGCAGGATGCAGTGCACAAGTTGTGAATGACCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGAAATTGAAAAGGTCTaGAAGAGTGAGCCAATGGAA +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWEIEKV*KSEPME
Trigger: TTCCATTGGCTCACTCTTCCAGACCTTTTCAATTTC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp CGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCAACAGAATCAAGTGGACGTTATCCCCTaGGGGCATAAATCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: RLHILLQSLPEFSLQQNQVDVIP*GHKSLH
Trigger: ATGCAAAGATTTATGCCCCCAGGGGATAACGTCCAC...TTGATTCTGTTGGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp AATATGACCAGCAGAATCATTAATGAGGCCAAACAACCTGCAAGCTGTGTCTTCAGTGCCTCTCTAAGTTaGCTGCCTAAAACTGCATCA +
Preference number: 4 (lower is better)
Translates to: NMTSRIINEAKQPASCVFSASLS*LPKTAS
Trigger: TGATGCAGTTTTAGGCAGCCAACTTAGAGAGGCACT...GAAGACACAGCTTGCAGGTTGTTTGGCCTCATTAATGATTCTGCTGGTCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp GCTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTATACAAGTCGCTATTTGTAAGCCAGATGGTCTaGGGCAATGATTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: AGFTPVFRFNALLYKSLFVSQMV*GNDSKR
Trigger: CCTCTTTGAATCATTGCCCCAGACCATCTGGCTTAC...AAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423416.5
3UTR CAA 72 bp GAGCTCCCTAGAGGAAGTGTTCCAACGACATCCACATaGTATGATTCTTTCAAGTTAAACCCAGCTGAAATG +
Preference number: 4 (lower is better)
Translates to: ELPRGSVPTTST*YDSFKLNPAEM
Trigger: CATTTCAGCTGGGTTTAACTTGAAAGAATCATACAATGTGGATGTCGTTGGAACACTTCCTCTAGGGAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445809.5
3UTR CAA 72 bp AGCAGCCCTAGAGGAAGTGTTCCAACGACATCCACATaGTATGATTCTTTCAAGTTAAACCCAGCTGAAATG +
Preference number: 4 (lower is better)
Translates to: SSPRGSVPTTST*YDSFKLNPAEM
Trigger: CATTTCAGCTGGGTTTAACTTGAAAGAATCATACAATGTGGATGTCGTTGGAACACTTCCTCTAGGGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR TCA 90 bp TGTGCACTGCATCCTGCTAAGTATACATATATACCGACGTCTCCATATTCTTTTGAGACAAGCATTTCCTaGGTGTCACCAGATCCAATG +
Preference number: 4 (lower is better)
Translates to: CALHPAKYTYIPTSPYSFETSIS*VSPDPM
Trigger: CATTGGATCTGGTGACACTCAGGAAATGCTTGTCTC...AAAAGAATATGGAGACGTCGGTATATATGTATACTTAGCAGGATGCAGTGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGATAACAGGGTAAAATaGAGAGTACAGGCCAAATAT +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWDNRVK*RVQAKY
Trigger: ATATTTGGCCTGTACTCTTCATTTTACCCTGTTATC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTGACATCCACATTGTATaGTTCTTTCAAGTTAAACCC +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTDIHIV*FFQVKP
Trigger: GGGTTTAACTTGAAAGAATCATACAATGTGGATGTC...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGACATCCACATTGTATaGTTCTTTCAAGTTAAACCC +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWDIHIV*FFQVKP
Trigger: GGGTTTAACTTGAAAGAATCATACAATGTGGATGTC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp CTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTATACAAGTCGCTATTTGCATGGAGATGGTCACTaGAAATCCAACGATGGCTAT +
Preference number: 4 (lower is better)
Translates to: LGSLQSFVLMHCYTSRYLHGDGH*KSNDGY
Trigger: ATAGCCATCGTTGGATTTTCAGTGACCATCTCCATG...CAAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423416.5
ENST00000456463.5
CDS-3UTR TCA 90 bp ATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCCATGGAGATGGTCACTaGAAATCCAACGATGGCTAT +
Preference number: 4 (lower is better)
Translates to: IYTDVSIFFYNPCQSFHSHGDGH*KSNDGY
Trigger: ATAGCCATCGTTGGATTTTCAGTGACCATCTCCATG...GGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp TGTGCACTGCATCCTGCTAAGTATACATATATACCGACGTCTCCATATTCTTTTAAAGGTCTGGAAGAGTaGGCCAATGGAATTGCACAG +
Preference number: 4 (lower is better)
Translates to: CALHPAKYTYIPTSPYSFKGLEE*ANGIAQ
Trigger: CTGTGCAATTCCATTGGCTCACTCTTCCAGACCTTT...AAAAGAATATGGAGACGTCGGTATATATGTATACTTAGCAGGATGCAGTGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACATCCAGTTGCTAATATaGCCAGCAGAATCATTAATG +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYIQLLI*PAESLM
Trigger: CATTAATGATTCTGCTGGTCATATTAGCAACTGGAT...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR TCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGATCCAGTTGCTAATATaGCCAGCAGAATCATTAATG +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWIQLLI*PAESLM
Trigger: CATTAATGATTCTGCTGGTCATATTAGCAACTGGAT...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR GCA 90 bp CATCAGTTTCAGGAAGCTTTCCAAGGACTTTGTAGCTTGGACTCTGTGTTCTGTATAGTACCTCTGGGTTaGTGCAAGGATTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: HQFQEAFQGLCSLDSVFCIVPLG*CKDFIF
Trigger: GAAAATGAAATCCTTGCAGCAACCCAGAGGTACTAT...ACAGAACACAGAGTCCAAGCTACAAAGTCCTTGGAAAGCTTCCTGAAACTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR GCA 90 bp CATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCAGGAGTACATGTGAATaGCTGTTTCAGCTTATCCGC +
Preference number: 4 (lower is better)
Translates to: HIYRRLHILLQSLPEFSLRSTCE*LFQLIR
Trigger: GCGGATAAGCTGAAACAGGCATTCACATGTACTCCT...GAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCAGGAGTACATGTGAATaGCTGTTTCAGCTTATCCGC +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSRSTCE*LFQLIR
Trigger: GCGGATAAGCTGAAACAGGCATTCACATGTACTCCT...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTCTGTGCCATTGGTTaGATTTACTCCTCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSLCAIG*IYSSWN
Trigger: ATTCCAGGAGGAGTAAATGCAACCAATGGCACAGAG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp CATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCTCTGTGCCATTGGTTaGATTTACTCCTCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: HIYRRLHILLQSLPEFSLLCAIG*IYSSWN
Trigger: ATTCCAGGAGGAGTAAATGCAACCAATGGCACAGAG...GAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTAGGTTTTTAACATTCTaGAACACAGCAACTGTACTA +
Preference number: 4 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPRFLTF*NTATVL
Trigger: TAGTACAGTTGCTGTGTTGCAGAATGTTAAAAACCT...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR GCA 90 bp CGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCAACAGAATCAAGGGAGATCTGAGAACTaGATAAACATTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RLHILLQSLPEFSLQQNQGRSEN*INIPFR
Trigger: CCTGAAGGGAATGTTTATGCAGTTCTCAGATCTCCC...TTGATTCTGTTGGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCTGCGTTGGCCATATTTaGATTTCCGACTTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSCVGHI*ISDFLS
Trigger: GCTAAGGAAGTCGGAAATGCAAATATGGCCAACGCA...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR GCA 90 bp ATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCTGCGTTGGCCATATTTaGATTTCCGACTTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: IYTDVSIFFYNPCQSFHSCVGHI*ISDFLS
Trigger: GCTAAGGAAGTCGGAAATGCAAATATGGCCAACGCA...GGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp TATTTTACTTCACCATCCTCTTCTTCAGGCTTGGTAGCATCCTCTCCATCTACTGGGGGCATAAATCTTTaGATTTCCTCAGGAAATGTG +
Preference number: 4 (lower is better)
Translates to: YFTSPSSSSGLVASSPSTGGINL*ISSGNV
Trigger: CACATTTCCTGAGGAAATGCAAAGATTTATGCCCCC...AGTAGATGGAGAGGATGCTACCAAGCCTGAAGAAGAGGATGGTGAAGTAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp GCATCTGCTTTGACAACAGTTGCGTTGGCCATATTTGCATTTCCGACTTCCTTATTCTTTTACAATCCCTaGCAGAGTTTTCACTCCAAC +
Preference number: 4 (lower is better)
Translates to: ASALTTVALAIFAFPTSLFFYNP*QSFHSN
Trigger: GTTGGAGTGAAAACTCTGGCAGGGATTGTAAAAGAA...TAAGGAAGTCGGAAATGCAAATATGGCCAACGCAACTGTTGTCAAAGCAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp CGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCAACAGAATCAATCAGCTTATCCGCAATaGAATCAGGAACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RLHILLQSLPEFSLQQNQSAYPQ*NQEPCP
Trigger: AGGACAAGGTTCCTGATTCCATTGCGGATAAGCTGA...TTGATTCTGTTGGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCTATGGATATGTGTCTaGAGGTTCCAAGAAAACAAT +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWLWICV*RFQENN
Trigger: ATTGTTTTCTTGGAACCTCCAGACACATATCCATAG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACCTATGGATATGTGTCTaGAGGTTCCAAGAAAACAAT +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYLWICV*RFQENN
Trigger: ATTGTTTTCTTGGAACCTCCAGACACATATCCATAG...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCAGCAAAAGGACCTATaGATATGTGTCTGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSQQKDL*ICVWRF
Trigger: GAACCTCCAGACACATATCCATAGGTCCTTTTGCTG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp TGTGCACTGCATCCTGCTAAGTATACATATATACCGACGTCTCCATATTCTTTTCGATGGCTATGGCAATaGCATCTACGTACACAAGGT +
Preference number: 4 (lower is better)
Translates to: CALHPAKYTYIPTSPYSFRWLWQ*HLRTQG
Trigger: ACCTTGTGTACGTAGATGCCATTGCCATAGCCATCG...AAAAGAATATGGAGACGTCGGTATATATGTATACTTAGCAGGATGCAGTGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp TGTTCTGTAAATCACAGTCAGCAGAGCAATGATCACAGCAGTGATCAAACCATAATCCAACGATGGCTATaGCAATGGCATCTACGTACA +
Preference number: 4 (lower is better)
Translates to: CSVNHSQQSNDHSSDQTIIQRWL*QWHLRT
Trigger: TGTACGTAGATGCCATTGCCATAGCCATCGTTGGAT...TATGGTTTGATCACTGCTGTGATCATTGCTCTGCTGACTGTGATTTACAGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR CCA 90 bp AATATGACCAGCAGAATCATTAATGAGGCCAAACAACCTGCAAGCTGTGTCTTCCTGAAAATCCAACGATaGCTATGGCAATGGCATCTA +
Preference number: 4 (lower is better)
Translates to: NMTSRIINEAKQPASCVFLKIQR*LWQWHL
Trigger: TAGATGCCATTGCCATAGCCATCGTTGGATTTTCAG...GAAGACACAGCTTGCAGGTTGTTTGGCCTCATTAATGATTCTGCTGGTCATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR CCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCTCTTGGCCATGGAGATaGTCACTGAAAATCCAACGA +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSSWPWR*SLKIQR
Trigger: TCGTTGGATTTTCAGTGACCATCTCCATGGCCAAGA...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp ATACATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCATCCCATGATGACTGCTaGGTTCACTCCAGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: IHIYRRLHILLQSLPEFSSHDDC*VHSSLS
Trigger: CGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGA...TGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCAGTGCCTCTCTAAGTTaGCTGCCTAAAACTGCATCA +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSSASLS*LPKTAS
Trigger: TGATGCAGTTTTAGGCAGCCAACTTAGAGAGGCACT...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp CTCCCTAGAGGAAGTGTTCCAACGACATCCACATTGTATGATTCTTTCAAGTTAAGTGCCTCTCTAAGTTaGCTGCCTAAAACTGCATCA +
Preference number: 4 (lower is better)
Translates to: LPRGSVPTTSTLYDSFKLSASLS*LPKTAS
Trigger: TGATGCAGTTTTAGGCAGCCAACTTAGAGAGGCACT...TAACTTGAAAGAATCATACAATGTGGATGTCGTTGGAACACTTCCTCTAGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445809.5
CDS-3UTR TCA 90 bp CCTCATATGCGTCTATATCAATATACACATCAGTTTCAGGAAGCTTTCCAAGGACATGGAGATGGTCACTaGAAATCCAACGATGGCTAT +
Preference number: 4 (lower is better)
Translates to: PHMRLYQYTHQFQEAFQGHGDGH*KSNDGY
Trigger: ATAGCCATCGTTGGATTTTCAGTGACCATCTCCATG...TCCTTGGAAAGCTTCCTGAAACTGATGTGTATATTGATATAGACGCATATGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR TCA 90 bp TGTTCTGTAAATCACAGTCAGCAGAGCAATGATCACAGCAGTGATCAAACCATAGAAAAAGGGGAGATCTaGGAACTGCATAAACATTCC +
Preference number: 4 (lower is better)
Translates to: CSVNHSQQSNDHSSDQTIEKGEI*ELHKHS
Trigger: GGAATGTTTATGCAGTTCTCAGATCTCCCCTTTTTC...TATGGTTTGATCACTGCTGTGATCATTGCTCTGCTGACTGTGATTTACAGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTTTCCTTGAATTTGTATaGTGGCAGCCATTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTFLEFV*WQPFSY
Trigger: ATAACTAAATGGCTGCCAGCATACAAATTCAAGGAA...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGTTCCTTGAATTTGTATaGTGGCAGCCATTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWFLEFV*WQPFSY
Trigger: ATAACTAAATGGCTGCCAGCATACAAATTCAAGGAA...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp ACTGAAAATCCAACGATGGCTATGGCAATGGCATCTACGTACACAAGGTGGAAGTTCCTTGAATTTGTATaGTGGCAGCCATTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: TENPTMAMAMASTYTRWKFLEFV*WQPFSY
Trigger: ATAACTAAATGGCTGCCAGCATACAAATTCAAGGAA...CTTCCACCTTGTGTACGTAGATGCCATTGCCATAGCCATCGTTGGATTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR GCA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGAGGTTTTTAACATTCTaGAACACAGCAACTGTACTA +
Preference number: 4 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWRFLTF*NTATVL
Trigger: TAGTACAGTTGCTGTGTTGCAGAATGTTAAAAACCT...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR GCA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAAAGGTTTTTAACATTCTaGAACACAGCAACTGTACTA +
Preference number: 4 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKRFLTF*NTATVL
Trigger: TAGTACAGTTGCTGTGTTGCAGAATGTTAAAAACCT...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000423416.5
ENST00000454864.5
CDS-3UTR GCA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACAGGTTTTTAACATTCTaGAACACAGCAACTGTACTA +
Preference number: 4 (lower is better)
Translates to: STIHLARRHSPSKSSLDYRFLTF*NTATVL
Trigger: TAGTACAGTTGCTGTGTTGCAGAATGTTAAAAACCT...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR GCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCGGGGGCATAAATCTTTaGATTTCCTCAGGAAATGTG +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSGGINL*ISSGNV
Trigger: CACATTTCCTGAGGAAATGCAAAGATTTATGCCCCC...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp GTGAGGTCATTCACAACTTGTGCACTGCATCCTGCTAAGTATACATATATACCGTTCTTTTACAATCCCTaGCAGAGTTTTCACTCCAAC +
Preference number: 4 (lower is better)
Translates to: VRSFTTCALHPAKYTYIPFFYNP*QSFHSN
Trigger: GTTGGAGTGAAAACTCTGGCAGGGATTGTAAAAGAA...CGGTATATATGTATACTTAGCAGGATGCAGTGCACAAGTTGTGAATGACCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp TATTTTACTTCACCATCCTCTTCTTCAGGCTTGGTAGCATCCTCTCCATCTACTCTTGAATTTGTATGCTaGCAGCCATTTAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: YFTSPSSSSGLVASSPSTLEFVC*QPFSYG
Trigger: CCCATAACTAAATGGCTGCCAGCATACAAATTCAAG...AGTAGATGGAGAGGATGCTACCAAGCCTGAAGAAGAGGATGGTGAAGTAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp ATACATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCAGTAAGGTCACAGACATaGCGACTTTCACTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: IHIYRRLHILLQSLPEFSVRSQT*RLSLSR
Trigger: CCTTGAGAGTGAAAGTCGCCATGTCTGTGACCTTAC...TGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGAAAATCCAACGATaGCTATGGCAATGGCATCTA +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSLKIQR*LWQWHL
Trigger: TAGATGCCATTGCCATAGCCATCGTTGGATTTTCAG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CCA 90 bp ATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCCTGAAAATCCAACGATaGCTATGGCAATGGCATCTA +
Preference number: 4 (lower is better)
Translates to: IYTDVSIFFYNPCQSFHSLKIQR*LWQWHL
Trigger: TAGATGCCATTGCCATAGCCATCGTTGGATTTTCAG...GGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR TCA 90 bp GCTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTATACAAGTCGCTATTTACACCTAGGCAAAACTaGATGATTCCTGAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: AGFTPVFRFNALLYKSLFTPRQN*MIPESK
Trigger: CTTACTTTCAGGAATCATTCAGTTTTGCCTAGGTGT...AAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR TCA 90 bp CCATCTACTTCTGCATCCTTTCGTTTTAATGCATTGCTATACAAGTCGCTATTTCAAGTTAAACCCAGCTaGAATGCCAGTTCCCATTAC +
Preference number: 4 (lower is better)
Translates to: PSTSASFRFNALLYKSLFQVKPS*NASSHY
Trigger: GTAATGGGAACTGGCATTTCAGCTGGGTTTAACTTG...AAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGGATGCAGAAGTAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454864.5
CDS-3UTR TCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCAAAATCTATTCCGAGTaGGGTCATTCACAACTTGTG +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSKIYSE*GHSQLV
Trigger: CACAAGTTGTGAATGACCTCACTCGGAATAGATTTT...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp GCTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTATACAAGTCGCTATTTAAAATCTATTCCGAGTaGGGTCATTCACAACTTGTG +
Preference number: 4 (lower is better)
Translates to: AGFTPVFRFNALLYKSLFKIYSE*GHSQLV
Trigger: CACAAGTTGTGAATGACCTCACTCGGAATAGATTTT...AAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp ATACATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCTGTGCCATTGGTTaGATTTACTCCTCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: IHIYRRLHILLQSLPEFSLCAIG*IYSSWN
Trigger: ATTCCAGGAGGAGTAAATGCAACCAATGGCACAGAG...TGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp TGTTCTGTAAATCACAGTCAGCAGAGCAATGATCACAGCAGTGATCAAACCATATGCTTTGACAACAGTTaGGTTGGCCATATTTGCATT +
Preference number: 4 (lower is better)
Translates to: CSVNHSQQSNDHSSDQTICFDNS*VGHICI
Trigger: AATGCAAATATGGCCAACGCAACTGTTGTCAAAGCA...TATGGTTTGATCACTGCTGTGATCATTGCTCTGCTGACTGTGATTTACAGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp ATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCATCTACTTCTGCATCTaGTTTGACAACAGTTGCGTT +
Preference number: 4 (lower is better)
Translates to: IYTDVSIFFYNPCQSFHSIYFCI*FDNSCV
Trigger: AACGCAACTGTTGTCAAAGCAGATGCAGAAGTAGAT...GGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR GCA 90 bp GCTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTATACAAGTCGCTATTTTCACAACTTGTGCACTaGATCCTGCTAAGTATACAT +
Preference number: 4 (lower is better)
Translates to: AGFTPVFRFNALLYKSLFSQLVH*ILLSIH
Trigger: ATGTATACTTAGCAGGATGCAGTGCACAAGTTGTGA...AAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp CCATCTACTTCTGCATCCTTTCGTTTTAATGCATTGCTATACAAGTCGCTATTTTCAGCTTATCCGCAATaGAATCAGGAACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: PSTSASFRFNALLYKSLFSAYPQ*NQEPCP
Trigger: AGGACAAGGTTCCTGATTCCATTGCGGATAAGCTGA...AAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGGATGCAGAAGTAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454864.5
CDS-3UTR CCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTTGAATTTGTATGCTaGCAGCCATTTAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSLEFVC*QPFSYG
Trigger: CCCATAACTAAATGGCTGCCAGCATACAAATTCAAG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp ATACATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACAGCAAAAGGACCTATaGATATGTGTCTGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: IHIYRRLHILLQSLPEFSQQKDL*ICVWRF
Trigger: GAACCTCCAGACACATATCCATAGGTCCTTTTGCTG...TGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCGACATCCACATTGTATaGTTCTTTCAAGTTAAACCC +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSDIHIV*FFQVKP
Trigger: GGGTTTAACTTGAAAGAATCATACAATGTGGATGTC...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCATCCAGTTGCTAATATaGCCAGCAGAATCATTAATG +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSIQLLI*PAESLM
Trigger: CATTAATGATTCTGCTGGTCATATTAGCAACTGGAT...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR TCA 90 bp GCTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTATACAAGTCGCTATTTATCCAGTTGCTAATATaGCCAGCAGAATCATTAATG +
Preference number: 4 (lower is better)
Translates to: AGFTPVFRFNALLYKSLFIQLLI*PAESLM
Trigger: CATTAATGATTCTGCTGGTCATATTAGCAACTGGAT...AAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CCA 90 bp ATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCCTATGGATATGTGTCTaGAGGTTCCAAGAAAACAAT +
Preference number: 4 (lower is better)
Translates to: IYTDVSIFFYNPCQSFHSLWICV*RFQENN
Trigger: ATTGTTTTCTTGGAACCTCCAGACACATATCCATAG...GGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTATGGATATGTGTCTaGAGGTTCCAAGAAAACAAT +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSLWICV*RFQENN
Trigger: ATTGTTTTCTTGGAACCTCCAGACACATATCCATAG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CCA 90 bp ACATTGTATGATTCTTTCAAGTTAAACCCAGCTGAAATGCCAGTTCCCATTACGGAAATTGAAAAGGTCTaGAAGAGTGAGCCAATGGAA +
Preference number: 4 (lower is better)
Translates to: TLYDSFKLNPAEMPVPITEIEKV*KSEPME
Trigger: TTCCATTGGCTCACTCTTCCAGACCTTTTCAATTTC...CGTAATGGGAACTGGCATTTCAGCTGGGTTTAACTTGAAAGAATCATACAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR TCA 90 bp TGTGCACTGCATCCTGCTAAGTATACATATATACCGACGTCTCCATATTCTTTTGATAACAGGGTAAAATaGAGAGTACAGGCCAAATAT +
Preference number: 4 (lower is better)
Translates to: CALHPAKYTYIPTSPYSFDNRVK*RVQAKY
Trigger: ATATTTGGCCTGTACTCTTCATTTTACCCTGTTATC...AAAAGAATATGGAGACGTCGGTATATATGTATACTTAGCAGGATGCAGTGCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
CDS-3UTR TCA 90 bp ATACATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTAGGCAAAACTGAATaGTTCCTGAAAGTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: IHIYRRLHILLQSLPEFSLGKTE*FLKVRS
Trigger: TGACCTTACTTTCAGGAATCATTCAGTTTTGCCTAG...TGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR GCA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCTTCCTTGAATTTGTATaGTGGCAGCCATTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSFLEFV*WQPFSY
Trigger: ATAACTAAATGGCTGCCAGCATACAAATTCAAGGAA...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp ATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCAGGTTTTTAACATTCTaGAACACAGCAACTGTACTA +
Preference number: 4 (lower is better)
Translates to: IYTDVSIFFYNPCQSFHSRFLTF*NTATVL
Trigger: TAGTACAGTTGCTGTGTTGCAGAATGTTAAAAACCT...GGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423416.5
ENST00000454864.5
CDS-3UTR GCA 90 bp GTCTATATCAATATACACATCAGTTTCAGGAAGCTTTCCAAGGACTTTGTAGCTTCACAACTTGTGCACTaGATCCTGCTAAGTATACAT +
Preference number: 4 (lower is better)
Translates to: VYINIHISFRKLSKDFVASQLVH*ILLSIH
Trigger: ATGTATACTTAGCAGGATGCAGTGCACAAGTTGTGA...AGCTACAAAGTCCTTGGAAAGCTTCCTGAAACTGATGTGTATATTGATATAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR CCA 90 bp GTCTATATCAATATACACATCAGTTTCAGGAAGCTTTCCAAGGACTTTGTAGCTTGCATTTACTCCTCCTaGAATGACTATATCATCTGG +
Preference number: 4 (lower is better)
Translates to: VYINIHISFRKLSKDFVACIYSS*NDYIIW
Trigger: CCAGATGATATAGTCATTCCAGGAGGAGTAAATGCA...AGCTACAAAGTCCTTGGAAAGCTTCCTGAAACTGATGTGTATATTGATATAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR TCA 90 bp ATACATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCAGACATCCACATTGTATaGTTCTTTCAAGTTAAACCC +
Preference number: 4 (lower is better)
Translates to: IHIYRRLHILLQSLPEFSDIHIV*FFQVKP
Trigger: GGGTTTAACTTGAAAGAATCATACAATGTGGATGTC...TGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CCA 90 bp ATACATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTATGGATATGTGTCTaGAGGTTCCAAGAAAACAAT +
Preference number: 4 (lower is better)
Translates to: IHIYRRLHILLQSLPEFSLWICV*RFQENN
Trigger: ATTGTTTTCTTGGAACCTCCAGACACATATCCATAG...TGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
CDS-3UTR GCA 90 bp CCATCTACTTCTGCATCCTTTCGTTTTAATGCATTGCTATACAAGTCGCTATTTTTCCTTGAATTTGTATaGTGGCAGCCATTTAGTTAT +
Preference number: 4 (lower is better)
Translates to: PSTSASFRFNALLYKSLFFLEFV*WQPFSY
Trigger: ATAACTAAATGGCTGCCAGCATACAAATTCAAGGAA...AAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGGATGCAGAAGTAGATGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454864.5
CDS-3UTR CAA 90 bp GATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCGGGAGAGCTCGCTCCTaGGCCCAGCCCGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: DSRAGIQTLSTWPQSLNCGRARS*AQPGLP
Trigger: GGGCAGCCCGGGCTGGGCCAAGGAGCGAGCTCTCCC...GCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCGTGGCAGGAGTGGCATaGGGCTCCAAGTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGVAGVA*GSKSSW
Trigger: CCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp GCTGAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCGGGAGAGCTCGCTCCTaGGCCCAGCCCGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: AEVTPLTDSRAGIQTLSTGRARS*AQPGLP
Trigger: GGGCAGCCCGGGCTGGGCCAAGGAGCGAGCTCTCCC...GGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCCTGGCCTCTGTGCCATaGGTTGCATTTACTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGLASVP*VAFTPP
Trigger: AGGAGGAGTAAATGCAACCAATGGCACAGAGGCCAG...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTGGGAGAGCTCGCTCCTaGGCCCAGCCCGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTGRARS*AQPGLP
Trigger: GGGCAGCCCGGGCTGGGCCAAGGAGCGAGCTCTCCC...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000432958.6
CDS-3UTR CAA 90 bp GAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGGGTAGCCATGTTTATTaGCTAAGGTCTTGGCCATGG +
Preference number: 5 (lower is better)
Translates to: EWQEWHWAPSPPGKGEPRGSHVY*LRSWPW
Trigger: CCATGGCCAAGACCTTAGCAAATAAACATGGCTACC...CCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp AGGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGACAGGAACCTTGTCCTTaGTGTGTAGTCTTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: RSGRSGIGLQVLLGRGSRQEPCP*CVVFPG
Trigger: TCCAGGAAAGACTACACACAAAGGACAAGGTTCCTG...TCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp GGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGCCTAGGGAACACACGTaGAGGTTTTTAACATTCTGC +
Preference number: 5 (lower is better)
Translates to: GVAGVALGSKSSWEGGAEPREHT*RFLTFC
Trigger: GCAGAATGTTAAAAACCTCAACGTGTGTTCCCTAGG...CTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423416.5
ENST00000454864.5
CDS-3UTR CAA 90 bp GAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGTTGACAACAGTTGCGTaGGCCATATTTGCATTTCCG +
Preference number: 5 (lower is better)
Translates to: EWQEWHWAPSPPGKGEPRLTTVA*AIFAFP
Trigger: CGGAAATGCAAATATGGCCAACGCAACTGTTGTCAA...CCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCCATAGTACCTCTGGGTaGCTGCAAGGATTTCATTTT +
Preference number: 5 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGHSTSG*LQGFHF
Trigger: AAAATGAAATCCTTGCAGCAACCCAGAGGTACTATG...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp CCCCATCCTAGGGTGAGGTCCTCATCTATGCCTCAGGAGTGGCAGGAGTGGCATAGTACAGGCCAAATATaGGAGGCACAGCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: PHPRVRSSSMPQEWQEWHSTGQI*EAQLPA
Trigger: TGCTGGCAGCTGTGCCTCCAATATTTGGCCTGTACT...ATGCCACTCCTGCCACTCCTGAGGCATAGATGAGGACCTCACCCTAGGATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp AGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGGCTGGGGGCATAAATCTTaGCATTTCCTCAGGAAATGT +
Preference number: 5 (lower is better)
Translates to: SGRSGIGLQVLLGRGSRGWGHKS*HFLRKC
Trigger: ACATTTCCTGAGGAAATGCAAAGATTTATGCCCCCA...GCCTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCGGGAGAGCTCGCTCCTaGGCCCAGCCCGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSGRARS*AQPGLP
Trigger: GGGCAGCCCGGGCTGGGCCAAGGAGCGAGCTCTCCC...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000432958.6
CDS-3UTR CAA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCGCACAGCTGCCAGCATaGCAAAGGCTAAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSAQLPA*QRLSLE
Trigger: CTCAAGGCTTAGCCTTTGCAATGCTGGCAGCTGTGC...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGGCACAGCTGCCAGCATaGCAAAGGCTAAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWAQLPA*QRLSLE
Trigger: CTCAAGGCTTAGCCTTTGCAATGCTGGCAGCTGTGC...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp CACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAGTACAGGCCAAATATaGGAGGCACAGCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: HPTNRFQSWHSNPVHLAPSTGQI*EAQLPA
Trigger: TGCTGGCAGCTGTGCCTCCAATATTTGGCCTGTACT...TGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp CCCCATCCTAGGGTGAGGTCCTCATCTATGCCTCAGGAGTGGCAGGAGTGGCATCCTCTGTGCCATTGGTaGCATTTACTCCTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: PHPRVRSSSMPQEWQEWHPLCHW*HLLLLE
Trigger: TTCCAGGAGGAGTAAATGCAACCAATGGCACAGAGG...ATGCCACTCCTGCCACTCCTGAGGCATAGATGAGGACCTCACCCTAGGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp GGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCAGTGAGCCAATGGAATaGCACAGTCCCAGGGCAATG +
Preference number: 5 (lower is better)
Translates to: GHPTNRFQSWHSNPVHLASEPME*HSPRAM
Trigger: CATTGCCCTGGGACTGTGCAATTCCATTGGCTCACT...GGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CAA 90 bp CCCCATCCTAGGGTGAGGTCCTCATCTATGCCTCAGGAGTGGCAGGAGTGGCATACTTCTGCATCTGCTTaGACAACAGTTGCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: PHPRVRSSSMPQEWQEWHTSASA*TTVALA
Trigger: GGCCAACGCAACTGTTGTCAAAGCAGATGCAGAAGT...ATGCCACTCCTGCCACTCCTGAGGCATAGATGAGGACCTCACCCTAGGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp GGAGTGGCAGGAGTGGCATTGGGCTCCAAGTCCTCCTGGGAAGGGGGAGCCGAGACATATTCCTTGAATTaGTATGCTGGCAGCCATTTA +
Preference number: 5 (lower is better)
Translates to: GVAGVALGSKSSWEGGAETYSLN*YAGSHL
Trigger: TAAATGGCTGCCAGCATACAAATTCAAGGAATATGT...CTCGGCTCCCCCTTCCCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp ACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGTACAGGCCAAATATaGGAGGCACAGCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: TPLTDSRAGIQTLSTWPQSTGQI*EAQLPA
Trigger: TGCTGGCAGCTGTGCCTCCAATATTTGGCCTGTACT...TTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp GATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCCCTCTGTGCCATTGGTaGCATTTACTCCTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: DSRAGIQTLSTWPQSLNCPLCHW*HLLLLE
Trigger: TTCCAGGAGGAGTAAATGCAACCAATGGCACAGAGG...GCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp CTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGCTGGCCTCTGTGCCATaGGTTGCATTTACTCCTCCT +
Preference number: 5 (lower is better)
Translates to: LTDSRAGIQTLSTWPQSLLASVP*VAFTPP
Trigger: AGGAGGAGTAAATGCAACCAATGGCACAGAGGCCAG...CAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCTGGCCTCTGTGCCATaGGTTGCATTTACTCCTCCT +
Preference number: 5 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWLASVP*VAFTPP
Trigger: AGGAGGAGTAAATGCAACCAATGGCACAGAGGCCAG...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGAGTGAGCCAATGGAATaGCACAGTCCCAGGGCAATG +
Preference number: 5 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWSEPME*HSPRAM
Trigger: CATTGCCCTGGGACTGTGCAATTCCATTGGCTCACT...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CAA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGTGGCAGGAGTGGCATaGGGCTCCAAGTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPVAGVA*GSKSSW
Trigger: CCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp GATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCGAAGTGTTAAGTGACTaGGCTGAGGTCACCCCACTA +
Preference number: 5 (lower is better)
Translates to: DSRAGIQTLSTWPQSLNCEVLSD*AEVTPL
Trigger: TAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTC...GCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp GGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCTCTCATTAAACTCCTaGCCACCCAACAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: GHPTNRFQSWHSNPVHLALSLNS*PPNSKP
Trigger: TGGTTTGCTGTTGGGTGGCAAGGAGTTTAATGAGAG...GGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp GATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCGGTAGCCATGTTTATTaGCTAAGGTCTTGGCCATGG +
Preference number: 5 (lower is better)
Translates to: DSRAGIQTLSTWPQSLNCGSHVY*LRSWPW
Trigger: CCATGGCCAAGACCTTAGCAAATAAACATGGCTACC...GCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CAA 90 bp TACTTCCGCATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAAGTGAGCCAATGGAATaGCACAGTCCCAGGGCAATG +
Preference number: 5 (lower is better)
Translates to: YFRMAFLLAPMMTAGFTPSEPME*HSPRAM
Trigger: CATTGCCCTGGGACTGTGCAATTCCATTGGCTCACT...TGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATGCGGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp GCCGAGGCTTCCTGTTCAGCAAGTGCCTCTCTAAGTTGGCTGCCTAAAACTGCAAGTGAGCCAATGGAATaGCACAGTCCCAGGGCAATG +
Preference number: 5 (lower is better)
Translates to: AEASCSASASLSWLPKTASEPME*HSPRAM
Trigger: CATTGCCCTGGGACTGTGCAATTCCATTGGCTCACT...TGCAGTTTTAGGCAGCCAACTTAGAGAGGCACTTGCTGAACAGGAAGCCTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCACTTCTGCATCTGCTTaGACAACAGTTGCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSTSASA*TTVALA
Trigger: GGCCAACGCAACTGTTGTCAAAGCAGATGCAGAAGT...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339444.10
CDS-3UTR CAA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTGTGGCAGGAGTGGCATaGGGCTCCAAGTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTVAGVA*GSKSSW
Trigger: CCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGTGGCAGGAGTGGCATaGGGCTCCAAGTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWVAGVA*GSKSSW
Trigger: CCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp GCTGAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCCAAAGCCTGAACTGCTaGGATTACACGGCATTTCCC +
Preference number: 5 (lower is better)
Translates to: AEVTPLTDSRAGIQTLSTQSLNC*DYTAFP
Trigger: GGGAAATGCCGTGTAATCCAAGCAGTTCAGGCTTTG...GGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp ACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAACAAAGCCTGAACTGCTaGGATTACACGGCATTTCCC +
Preference number: 5 (lower is better)
Translates to: TPLTDSRAGIQTLSTWPQQSLNC*DYTAFP
Trigger: GGGAAATGCCGTGTAATCCAAGCAGTTCAGGCTTTG...TTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGGAAGTGTTAAGTGACTaGGCTGAGGTCACCCCACTA +
Preference number: 5 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWEVLSD*AEVTPL
Trigger: TAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTC...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCAGGAACCTTGTCCTTaGTGTGTAGTCTTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWQEPCP*CVVFPG
Trigger: TCCAGGAAAGACTACACACAAAGGACAAGGTTCCTG...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp ACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAACAGGAACCTTGTCCTTaGTGTGTAGTCTTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: TPLTDSRAGIQTLSTWPQQEPCP*CVVFPG
Trigger: TCCAGGAAAGACTACACACAAAGGACAAGGTTCCTG...TTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp CTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGCAGGAACCTTGTCCTTaGTGTGTAGTCTTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: LTDSRAGIQTLSTWPQSLQEPCP*CVVFPG
Trigger: TCCAGGAAAGACTACACACAAAGGACAAGGTTCCTG...CAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp AGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTGGATTACCTCTGTGCCATTGGTaGCATTTACTCCTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: SWHSNPVHLAPKPELLGLPLCHW*HLLLLE
Trigger: TTCCAGGAGGAGTAAATGCAACCAATGGCACAGAGG...TAATCCAAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp GGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCTAGGGAACACACGTaGAGGTTTTTAACATTCTGC +
Preference number: 5 (lower is better)
Translates to: GHPTNRFQSWHSNPVHLAPREHT*RFLTFC
Trigger: GCAGAATGTTAAAAACCTCAACGTGTGTTCCCTAGG...GGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp GCTGAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCCTCTCATTAAACTCCTaGCCACCCAACAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: AEVTPLTDSRAGIQTLSTLSLNS*PPNSKP
Trigger: TGGTTTGCTGTTGGGTGGCAAGGAGTTTAATGAGAG...GGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp TTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGAACTGCTTCTCTCATTAAACTCCTaGCCACCCAACAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: FQSWHSNPVHLAPKPELLLSLNS*PPNSKP
Trigger: TGGTTTGCTGTTGGGTGGCAAGGAGTTTAATGAGAG...AAGCAGTTCAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp GCTGAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCGGTAGCCATGTTTATTaGCTAAGGTCTTGGCCATGG +
Preference number: 5 (lower is better)
Translates to: AEVTPLTDSRAGIQTLSTGSHVY*LRSWPW
Trigger: CCATGGCCAAGACCTTAGCAAATAAACATGGCTACC...GGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CAA 90 bp ATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTAGTGAGCCAATGGAATaGCACAGTCCCAGGGCAATG +
Preference number: 5 (lower is better)
Translates to: MAFLLAPMMTAGFTPVFRSEPME*HSPRAM
Trigger: CATTGCCCTGGGACTGTGCAATTCCATTGGCTCACT...ACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGAACATTCCCTTCAGGTaGACAATCACAATGGCCGAC +
Preference number: 5 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWNIPFR*TITMAD
Trigger: GTCGGCCATTGTGATTGTCAACCTGAAGGGAATGTT...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CAA 90 bp ACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAACATTCCCTTCAGGTaGACAATCACAATGGCCGAC +
Preference number: 5 (lower is better)
Translates to: TPLTDSRAGIQTLSTWPQNIPFR*TITMAD
Trigger: GTCGGCCATTGTGATTGTCAACCTGAAGGGAATGTT...TTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CAA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTCAAAGCCTGAACTGCTaGGATTACACGGCATTTCCC +
Preference number: 5 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPQSLNC*DYTAFP
Trigger: GGGAAATGCCGTGTAATCCAAGCAGTTCAGGCTTTG...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGCACAGCTGCCAGCATaGCAAAGGCTAAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPAQLPA*QRLSLE
Trigger: CTCAAGGCTTAGCCTTTGCAATGCTGGCAGCTGTGC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp AGCACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTAATATGACCAGCGCACAGCTGCCAGCATaGCAAAGGCTAAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: STAWGNDSKRNPVANMTSAQLPA*QRLSLE
Trigger: CTCAAGGCTTAGCCTTTGCAATGCTGGCAGCTGTGC...GCTGGTCATATTAGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445809.5
CDS-3UTR CAA 90 bp TACTTCCGCATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCACTCTCATTAAACTCCTaGCCACCCAACAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: YFRMAFLLAPMMTAGFTPLSLNS*PPNSKP
Trigger: TGGTTTGCTGTTGGGTGGCAAGGAGTTTAATGAGAG...TGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATGCGGAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp CTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGTTATTTGCTAAGGTCTaGGCCATGGAGATGGTCACT +
Preference number: 5 (lower is better)
Translates to: LTDSRAGIQTLSTWPQSLLFAKV*AMEMVT
Trigger: AGTGACCATCTCCATGGCCAAGACCTTAGCAAATAA...CAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CAA 90 bp GCTGAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTTATTTGCTAAGGTCTaGGCCATGGAGATGGTCACT +
Preference number: 5 (lower is better)
Translates to: AEVTPLTDSRAGIQTLSTLFAKV*AMEMVT
Trigger: AGTGACCATCTCCATGGCCAAGACCTTAGCAAATAA...GGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CAA 90 bp CACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAATGGTCAGCTCTATTTaGCTGGTTCTCCAGAAAAAG +
Preference number: 5 (lower is better)
Translates to: HPTNRFQSWHSNPVHLAPMVSSI*LVLQKK
Trigger: CTTTTTCTGGAGAACCAGCAAAATAGAGCTGACCAT...TGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CAA 90 bp CCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCTTGACAACAGTTGCGTaGGCCATATTTGCATTTCCG +
Preference number: 5 (lower is better)
Translates to: PLTDSRAGIQTLSTWPQSLTTVA*AIFAFP
Trigger: CGGAAATGCAAATATGGCCAACGCAACTGTTGTCAA...GCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339444.10
CDS-3UTR CAA 90 bp CACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCATGGGGGCATAAATCTTaGCATTTCCTCAGGAAATGT +
Preference number: 5 (lower is better)
Translates to: HPTNRFQSWHSNPVHLAPWGHKS*HFLRKC
Trigger: ACATTTCCTGAGGAAATGCAAAGATTTATGCCCCCA...TGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339444.10
CDS TCA 90 bp AAAGTGGTAAGCCAGATGGTCTGTGTCTTCCCACCGGTTCCCTCCTaGACAAGGCTTCGAGACAAGGAGCATGAAATTGAAAAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: KVVSQMVCVFPPVPS*TRLRDKEHEIEKVW
Trigger: CCAGACCTTTTCAATTTCATGCTCCTTGTCTCGAAGCCTTGTTCAGGAGGGAACCGGTGGGAAGACACAGACCATCTGGCTTACCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454864.5
CDS-3UTR CAA 90 bp GAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCATAGTACCTCTGGGTaGCTGCAAGGATTTCATTTT +
Preference number: 5 (lower is better)
Translates to: EVTPLTDSRAGIQTLSTWHSTSG*LQGFHF
Trigger: AAAATGAAATCCTTGCAGCAACCCAGAGGTACTATG...CCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp GGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTTTCAGGAACCTTGTCCTTaGTGTGTAGTCTTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: GLSPCSHDDCWVHSSLSFQEPCP*CVVFPG
Trigger: TCCAGGAAAGACTACACACAAAGGACAAGGTTCCTG...AAACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTGCACAGCTGCCAGCATaGCAAAGGCTAAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTAQLPA*QRLSLE
Trigger: CTCAAGGCTTAGCCTTTGCAATGCTGGCAGCTGTGC...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGCACAGCTGCCAGCATaGCAAAGGCTAAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWAQLPA*QRLSLE
Trigger: CTCAAGGCTTAGCCTTTGCAATGCTGGCAGCTGTGC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCTGGCCTCTGTGCCATaGGTTGCATTTACTCCTCCT +
Preference number: 5 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPLASVP*VAFTPP
Trigger: AGGAGGAGTAAATGCAACCAATGGCACAGAGGCCAG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp AATGACAGTGTGGACGTTATCCCCTGGGGGCATAAATCTTTGCATTTCCTCAGGCTGGCCTCTGTGCCATaGGTTGCATTTACTCCTCCT +
Preference number: 5 (lower is better)
Translates to: NDSVDVIPWGHKSLHFLRLASVP*VAFTPP
Trigger: AGGAGGAGTAAATGCAACCAATGGCACAGAGGCCAG...CCTGAGGAAATGCAAAGATTTATGCCCCCAGGGGATAACGTCCACACTGTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp ATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTCTCTCATTAAACTCCTaGCCACCCAACAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: MAFLLAPMMTAGFTPVFRLSLNS*PPNSKP
Trigger: TGGTTTGCTGTTGGGTGGCAAGGAGTTTAATGAGAG...ACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTAGTGAGCCAATGGAATaGCACAGTCCCAGGGCAATG +
Preference number: 5 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPSEPME*HSPRAM
Trigger: CATTGCCCTGGGACTGTGCAATTCCATTGGCTCACT...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp CTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTGATGGTCAGCTCTATTTaGCTGGTTCTCCAGAAAAAG +
Preference number: 5 (lower is better)
Translates to: LTDSRAGIQTLSTWPQSLMVSSI*LVLQKK
Trigger: CTTTTTCTGGAGAACCAGCAAAATAGAGCTGACCAT...CAGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339444.10
ENST00000393735.6
CDS-3UTR CAA 90 bp GCTGAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCCAAGGACTTTGTAGCTaGGACTCTGTGTTCTGTAAA +
Preference number: 5 (lower is better)
Translates to: AEVTPLTDSRAGIQTLSTQGLCS*DSVFCK
Trigger: TTTACAGAACACAGAGTCCAAGCTACAAAGTCCTTG...GGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339444.10
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCGTGGCAGGAGTGGCATaGGGCTCCAAGTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSVAGVA*GSKSSW
Trigger: CCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp CTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTATACAAGTCGCTATTTGGTGGCAGGAGTGGCATaGGGCTCCAAGTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LGSLQSFVLMHCYTSRYLVAGVA*GSKSSW
Trigger: CCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC...CAAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp CATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCGTGGCAGGAGTGGCATaGGGCTCCAAGTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: HIYRRLHILLQSLPEFSLVAGVA*GSKSSW
Trigger: CCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC...GAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp TACTTCCGCATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCACAAGTACAATACATCTaGCTAGGCGTCATTCACCCT +
Preference number: 5 (lower is better)
Translates to: YFRMAFLLAPMMTAGFTPQVQYI*LGVIHP
Trigger: AGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG...TGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCATGCGGAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445809.5
CDS CCA 90 bp GTCAACATTGTCATCTCTGCCGGGACATTCACACCCATTCCAATCTaGGCACTCACCTCTGTGTTCTGTAAATCACAGTCAGCAGAGCAA +
Preference number: 5 (lower is better)
Translates to: VNIVISAGTFTPIPI*ALTSVFCKSQSAEQ
Trigger: TTGCTCTGCTGACTGTGATTTACAGAACACAGAGGTGAGTGCCCAGATTGGAATGGGTGTGAATGTCCCGGCAGAGATGACAATGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487407.1
CDS-3UTR CAA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCAGTTCACTGAAGCCTaGATCACTGAGGCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWQFTEA*ITEAES
Trigger: GCTCTCAGCCTCAGTGATCAAGGCTTCAGTGAACTG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTCATAGTACCTCTGGGTaGCTGCAAGGATTTCATTTT +
Preference number: 5 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPHSTSG*LQGFHF
Trigger: AAAATGAAATCCTTGCAGCAACCCAGAGGTACTATG...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp CACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAACATATTCCTTGAATTaGTATGCTGGCAGCCATTTA +
Preference number: 5 (lower is better)
Translates to: HPTNRFQSWHSNPVHLAPTYSLN*YAGSHL
Trigger: TAAATGGCTGCCAGCATACAAATTCAAGGAATATGT...TGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp GGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCACATATTCCTTGAATTaGTATGCTGGCAGCCATTTA +
Preference number: 5 (lower is better)
Translates to: GHPTNRFQSWHSNPVHLATYSLN*YAGSHL
Trigger: TAAATGGCTGCCAGCATACAAATTCAAGGAATATGT...GGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACAGTACAGGCCAAATATaGGAGGCACAGCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: STIHLARRHSPSKSSLDYSTGQI*EAQLPA
Trigger: TGCTGGCAGCTGTGCCTCCAATATTTGGCCTGTACT...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp AATGACAGTGTGGACGTTATCCCCTGGGGGCATAAATCTTTGCATTTCCTCAGGCCTCTGTGCCATTGGTaGCATTTACTCCTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: NDSVDVIPWGHKSLHFLRPLCHW*HLLLLE
Trigger: TTCCAGGAGGAGTAAATGCAACCAATGGCACAGAGG...CCTGAGGAAATGCAAAGATTTATGCCCCCAGGGGATAACGTCCACACTGTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACCTGGCCTCTGTGCCATaGGTTGCATTTACTCCTCCT +
Preference number: 5 (lower is better)
Translates to: STIHLARRHSPSKSSLDYLASVP*VAFTPP
Trigger: AGGAGGAGTAAATGCAACCAATGGCACAGAGGCCAG...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTCTGGCCTCTGTGCCATaGGTTGCATTTACTCCTCCT +
Preference number: 5 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTLASVP*VAFTPP
Trigger: AGGAGGAGTAAATGCAACCAATGGCACAGAGGCCAG...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp CAAAGTTCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCCTGGCCTCTGTGCCATaGGTTGCATTTACTCCTCCT +
Preference number: 5 (lower is better)
Translates to: QSSEVLSDLAEVTPLTDSLASVP*VAFTPP
Trigger: AGGAGGAGTAAATGCAACCAATGGCACAGAGGCCAG...GGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGAACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp ATGGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTTTATTTGCTAAGGTCTaGGCCATGGAGATGGTCACT +
Preference number: 5 (lower is better)
Translates to: MAFLLAPMMTAGFTPVFRLFAKV*AMEMVT
Trigger: AGTGACCATCTCCATGGCCAAGACCTTAGCAAATAA...ACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423416.5
ENST00000456463.5
CDS-3UTR CAA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACAGTGAGCCAATGGAATaGCACAGTCCCAGGGCAATG +
Preference number: 5 (lower is better)
Translates to: STIHLARRHSPSKSSLDYSEPME*HSPRAM
Trigger: CATTGCCCTGGGACTGTGCAATTCCATTGGCTCACT...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp TTTGCATTTCCGACTTCCTTAGCGTACTTCCGCATGGCCTTTCTCCTTGCTCCCTTGACAACAGTTGCGTaGGCCATATTTGCATTTCCG +
Preference number: 5 (lower is better)
Translates to: FAFPTSLAYFRMAFLLAPLTTVA*AIFAFP
Trigger: CGGAAATGCAAATATGGCCAACGCAACTGTTGTCAA...GGGAGCAAGGAGAAAGGCCATGCGGAAGTACGCTAAGGAAGTCGGAAATGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp CCAGCAGAATCATTAATGAGGCCAAACAACCTGCAAGCTGTGTCTTCCCACCGGTTGACAACAGTTGCGTaGGCCATATTTGCATTTCCG +
Preference number: 5 (lower is better)
Translates to: PAESLMRPNNLQAVSSHRLTTVA*AIFAFP
Trigger: CGGAAATGCAAATATGGCCAACGCAACTGTTGTCAA...CCGGTGGGAAGACACAGCTTGCAGGTTGTTTGGCCTCATTAATGATTCTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS GCA 90 bp TTCTGCATCCTGTGTTGCTTTGACAACAGTTGCGTTGGCCATATTTaGATTTCCGACTTCCTTAGCGTACTTCCGCATGGCCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: FCILCCFDNSCVGHI*ISDFLSVLPHGLSP
Trigger: AGGAGAAAGGCCATGCGGAAGTACGCTAAGGAAGTCGGAAATGCAAATATGGCCAACGCAACTGTTGTCAAAGCAACACAGGATGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354356.8
ENST00000393723.2
ENST00000393727.5
CDS-3UTR CAA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCAGGAACCTTGTCCTTaGTGTGTAGTCTTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPQEPCP*CVVFPG
Trigger: TCCAGGAAAGACTACACACAAAGGACAAGGTTCCTG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp GCTGAGGTCACCCCACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCACATATTCCTTGAATTaGTATGCTGGCAGCCATTTA +
Preference number: 5 (lower is better)
Translates to: AEVTPLTDSRAGIQTLSTTYSLN*YAGSHL
Trigger: TAAATGGCTGCCAGCATACAAATTCAAGGAATATGT...GGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGTGGGGTGACCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCCTCTGTGCCATTGGTaGCATTTACTCCTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWPLCHW*HLLLLE
Trigger: TTCCAGGAGGAGTAAATGCAACCAATGGCACAGAGG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACCCTCTGTGCCATTGGTaGCATTTACTCCTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: STIHLARRHSPSKSSLDYPLCHW*HLLLLE
Trigger: TTCCAGGAGGAGTAAATGCAACCAATGGCACAGAGG...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCTCTCATTAAACTCCTaGCCACCCAACAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPLSLNS*PPNSKP
Trigger: TGGTTTGCTGTTGGGTGGCAAGGAGTTTAATGAGAG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTGGTAGCCATGTTTATTaGCTAAGGTCTTGGCCATGG +
Preference number: 5 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPGSHVY*LRSWPW
Trigger: CCATGGCCAAGACCTTAGCAAATAAACATGGCTACC...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CAA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTAACATTCCCTTCAGGTaGACAATCACAATGGCCGAC +
Preference number: 5 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPNIPFR*TITMAD
Trigger: GTCGGCCATTGTGATTGTCAACCTGAAGGGAATGTT...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000445809.5
CDS-3UTR CAA 90 bp CCAGCAGAATCATTAATGAGGCCAAACAACCTGCAAGCTGTGTCTTCCCACCGGCAAGGACTTTGTAGCTaGGACTCTGTGTTCTGTAAA +
Preference number: 5 (lower is better)
Translates to: PAESLMRPNNLQAVSSHRQGLCS*DSVFCK
Trigger: TTTACAGAACACAGAGTCCAAGCTACAAAGTCCTTG...CCGGTGGGAAGACACAGCTTGCAGGTTGTTTGGCCTCATTAATGATTCTGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR CAA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTTCTGCATCTGCTTaGACAACAGTTGCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTTSASA*TTVALA
Trigger: GGCCAACGCAACTGTTGTCAAAGCAGATGCAGAAGT...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306312.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR CAA 90 bp ACAATGGCCGACAGCACAGCCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTTGGGGGCATAAATCTTaGCATTTCCTCAGGAAATGT +
Preference number: 5 (lower is better)
Translates to: TMADSTAWGNDSKRNPVAWGHKS*HFLRKC
Trigger: ACATTTCCTGAGGAAATGCAAAGATTTATGCCCCCA...AGCAACTGGATTCCTCTTTGAATCATTGCCCCAGGCTGTGCTGTCGGCCATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp GTCTATATCAATATACACATCAGTTTCAGGAAGCTTTCCAAGGACTTTGTAGCTGTGGCAGGAGTGGCATaGGGCTCCAAGTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: VYINIHISFRKLSKDFVAVAGVA*GSKSSW
Trigger: CCAGGAGGACTTGGAGCCCAATGCCACTCCTGCCAC...AGCTACAAAGTCCTTGGAAAGCTTCCTGAAACTGATGTGTATATTGATATAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR CAA 90 bp GCATCTGCTTTGACAACAGTTGCGTTGGCCATATTTGCATTTCCGACTTCCTTAAACAGCAAAAGGACCTaGAGGAAGCTGAAGCACCCC +
Preference number: 5 (lower is better)
Translates to: ASALTTVALAIFAFPTSLNSKRT*RKLKHP
Trigger: GGGGTGCTTCAGCTTCCTCAAGGTCCTTTTGCTGTT...TAAGGAAGTCGGAAATGCAAATATGGCCAACGCAACTGTTGTCAAAGCAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS GCA 90 bp TTTGTTTTAACTCCAAACAGATATTTTAACATGGAGGTGAAGACATaGACAGCTGCTGCGGTGGTAAACCCACGGACCAGAGGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: FVLTPNRYFNMEVKT*TAAAVVNPRTRGSV
Trigger: CACAGAGCCTCTGGTCCGTGGGTTTACCACCGCAGCAGCTGTGCATGTCTTCACCTCCATGTTAAAATATCTGTTTGGAGTTAAAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000306312.8
ENST00000339444.10
ENST00000354356.8
ENST00000356767.8
ENST00000393723.2
ENST00000393727.5
ENST00000393729.5
ENST00000393730.5
ENST00000393735.6
ENST00000423416.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
ENST00000487407.1
CDS-3UTR CAA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTCAGGAACCTTGTCCTTaGTGTGTAGTCTTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTQEPCP*CVVFPG
Trigger: TCCAGGAAAGACTACACACAAAGGACAAGGTTCCTG...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCGCACAGCTGCCAGCATaGCAAAGGCTAAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSAQLPA*QRLSLE
Trigger: CTCAAGGCTTAGCCTTTGCAATGCTGGCAGCTGTGC...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp ATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCGCACAGCTGCCAGCATaGCAAAGGCTAAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: IYTDVSIFFYNPCQSFHSAQLPA*QRLSLE
Trigger: CTCAAGGCTTAGCCTTTGCAATGCTGGCAGCTGTGC...GGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp GTGAGGTCATTCACAACTTGTGCACTGCATCCTGCTAAGTATACATATATACCGCTGGCCTCTGTGCCATaGGTTGCATTTACTCCTCCT +
Preference number: 5 (lower is better)
Translates to: VRSFTTCALHPAKYTYIPLASVP*VAFTPP
Trigger: AGGAGGAGTAAATGCAACCAATGGCACAGAGGCCAG...CGGTATATATGTATACTTAGCAGGATGCAGTGCACAAGTTGTGAATGACCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp TCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCAGAGCTCCTAGGGAACACACGTaGAGGTTTTTAACATTCTGC +
Preference number: 5 (lower is better)
Translates to: SEVLSDLAEVTPLTDSRAPREHT*RFLTFC
Trigger: GCAGAATGTTAAAAACCTCAACGTGTGTTCCCTAGG...AGCTCTGGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCTCTCATTAAACTCCTaGCCACCCAACAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWLSLNS*PPNSKP
Trigger: TGGTTTGCTGTTGGGTGGCAAGGAGTTTAATGAGAG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp GCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTTTTAATGCATTGCTACTCTCATTAAACTCCTaGCCACCCAACAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: APMMTAGFTPVFRFNALLLSLNS*PPNSKP
Trigger: TGGTTTGCTGTTGGGTGGCAAGGAGTTTAATGAGAG...TAGCAATGCATTAAAACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACCTCTCATTAAACTCCTaGCCACCCAACAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: STIHLARRHSPSKSSLDYLSLNS*PPNSKP
Trigger: TGGTTTGCTGTTGGGTGGCAAGGAGTTTAATGAGAG...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp ACTAACAGATTCCAGAGCTGGCATTCAAACCCTGTCCACCTGGCCCCAAAGCCTCCAACGACATCCACATaGTATGATTCTTTCAAGTTA +
Preference number: 5 (lower is better)
Translates to: TNRFQSWHSNPVHLAPKPPTTST*YDSFKL
Trigger: TAACTTGAAAGAATCATACAATGTGGATGTCGTTGG...AGGCTTTGGGGCCAGGTGGACAGGGTTTGAATGCCAGCTCTGGAATCTGTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGGGTAGCCATGTTTATTaGCTAAGGTCTTGGCCATGG +
Preference number: 5 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWGSHVY*LRSWPW
Trigger: CCATGGCCAAGACCTTAGCAAATAAACATGGCTACC...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CAA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTGGTAGCCATGTTTATTaGCTAAGGTCTTGGCCATGG +
Preference number: 5 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTGSHVY*LRSWPW
Trigger: CCATGGCCAAGACCTTAGCAAATAAACATGGCTACC...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CAA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACGGTAGCCATGTTTATTaGCTAAGGTCTTGGCCATGG +
Preference number: 5 (lower is better)
Translates to: STIHLARRHSPSKSSLDYGSHVY*LRSWPW
Trigger: CCATGGCCAAGACCTTAGCAAATAAACATGGCTACC...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CAA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGAACATTCCCTTCAGGTaGACAATCACAATGGCCGAC +
Preference number: 5 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWNIPFR*TITMAD
Trigger: GTCGGCCATTGTGATTGTCAACCTGAAGGGAATGTT...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000445809.5
CDS-3UTR CAA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTTTGACAACAGTTGCGTaGGCCATATTTGCATTTCCG +
Preference number: 5 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPLTTVA*AIFAFP
Trigger: CGGAAATGCAAATATGGCCAACGCAACTGTTGTCAA...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR CAA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCAAGTACAATACATCTaGCTAGGCGTCATTCACCCT +
Preference number: 5 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPQVQYI*LGVIHP
Trigger: AGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS TCA 90 bp CATCTCTGGCCTCTGTGCCATTGGTTGCATTTACTCCTCCTGGAATaGCTATATCATCTGGTACTAATCGAACAGCTACACCACCAATCA +
Preference number: 5 (lower is better)
Translates to: HLWPLCHWLHLLLLE*LYHLVLIEQLHHQS
Trigger: TGATTGGTGGTGTAGCTGTTCGATTAGTACCAGATGATATAGTCATTCCAGGAGGAGTAAATGCAACCAATGGCACAGAGGCCAGAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000306312.8
ENST00000339444.10
ENST00000354356.8
ENST00000356767.8
ENST00000393723.2
ENST00000393727.5
ENST00000393729.5
ENST00000393730.5
ENST00000393735.6
ENST00000423416.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
ENST00000487407.1
CDS-3UTR CAA 90 bp TCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCAGAGCTCATAGTACCTCTGGGTaGCTGCAAGGATTTCATTTT +
Preference number: 5 (lower is better)
Translates to: SEVLSDLAEVTPLTDSRAHSTSG*LQGFHF
Trigger: AAAATGAAATCCTTGCAGCAACCCAGAGGTACTATG...AGCTCTGGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCATAGTACCTCTGGGTaGCTGCAAGGATTTCATTTT +
Preference number: 5 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPHSTSG*LQGFHF
Trigger: AAAATGAAATCCTTGCAGCAACCCAGAGGTACTATG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp TTTGCATTTCCGACTTCCTTAGCGTACTTCCGCATGGCCTTTCTCCTTGCTCCCACATATTCCTTGAATTaGTATGCTGGCAGCCATTTA +
Preference number: 5 (lower is better)
Translates to: FAFPTSLAYFRMAFLLAPTYSLN*YAGSHL
Trigger: TAAATGGCTGCCAGCATACAAATTCAAGGAATATGT...GGGAGCAAGGAGAAAGGCCATGCGGAAGTACGCTAAGGAAGTCGGAAATGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCAGTACAGGCCAAATATaGGAGGCACAGCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSSTGQI*EAQLPA
Trigger: TGCTGGCAGCTGTGCCTCCAATATTTGGCCTGTACT...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp ATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCAGTACAGGCCAAATATaGGAGGCACAGCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: IYTDVSIFFYNPCQSFHSSTGQI*EAQLPA
Trigger: TGCTGGCAGCTGTGCCTCCAATATTTGGCCTGTACT...GGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCCTAGGGAACACACGTaGAGGTTTTTAACATTCTGC +
Preference number: 5 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWPREHT*RFLTFC
Trigger: GCAGAATGTTAAAAACCTCAACGTGTGTTCCCTAGG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CAA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTCCTAGGGAACACACGTaGAGGTTTTTAACATTCTGC +
Preference number: 5 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTPREHT*RFLTFC
Trigger: GCAGAATGTTAAAAACCTCAACGTGTGTTCCCTAGG...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CAA 90 bp CAAAGTTCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCCCTAGGGAACACACGTaGAGGTTTTTAACATTCTGC +
Preference number: 5 (lower is better)
Translates to: QSSEVLSDLAEVTPLTDSPREHT*RFLTFC
Trigger: GCAGAATGTTAAAAACCTCAACGTGTGTTCCCTAGG...GGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGAACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACCCTAGGGAACACACGTaGAGGTTTTTAACATTCTGC +
Preference number: 5 (lower is better)
Translates to: STIHLARRHSPSKSSLDYPREHT*RFLTFC
Trigger: GCAGAATGTTAAAAACCTCAACGTGTGTTCCCTAGG...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CAA 90 bp GGCCTTTCTCCTTGCTCCCATGATGACTGCTGGGTTCACTCCAGTCTTTCGTTTCCAACGACATCCACATaGTATGATTCTTTCAAGTTA +
Preference number: 5 (lower is better)
Translates to: GLSPCSHDDCWVHSSLSFPTTST*YDSFKL
Trigger: TAACTTGAAAGAATCATACAATGTGGATGTCGTTGG...AAACGAAAGACTGGAGTGAACCCAGCAGTCATCATGGGAGCAAGGAGAAAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGTTATTTGCTAAGGTCTaGGCCATGGAGATGGTCACT +
Preference number: 5 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWLFAKV*AMEMVT
Trigger: AGTGACCATCTCCATGGCCAAGACCTTAGCAAATAA...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CAA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTTTATTTGCTAAGGTCTaGGCCATGGAGATGGTCACT +
Preference number: 5 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTLFAKV*AMEMVT
Trigger: AGTGACCATCTCCATGGCCAAGACCTTAGCAAATAA...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CAA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTTATTTGCTAAGGTCTaGGCCATGGAGATGGTCACT +
Preference number: 5 (lower is better)
Translates to: STIHLARRHSPSKSSLDYLFAKV*AMEMVT
Trigger: AGTGACCATCTCCATGGCCAAGACCTTAGCAAATAA...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCAGTGAGCCAATGGAATaGCACAGTCCCAGGGCAATG +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSSEPME*HSPRAM
Trigger: CATTGCCCTGGGACTGTGCAATTCCATTGGCTCACT...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp GCATCTGCTTTGACAACAGTTGCGTTGGCCATATTTGCATTTCCGACTTCCTTAAACATTCCCTTCAGGTaGACAATCACAATGGCCGAC +
Preference number: 5 (lower is better)
Translates to: ASALTTVALAIFAFPTSLNIPFR*TITMAD
Trigger: GTCGGCCATTGTGATTGTCAACCTGAAGGGAATGTT...TAAGGAAGTCGGAAATGCAAATATGGCCAACGCAACTGTTGTCAAAGCAGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTCAAGGACTTTGTAGCTaGGACTCTGTGTTCTGTAAA +
Preference number: 5 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPQGLCS*DSVFCK
Trigger: TTTACAGAACACAGAGTCCAAGCTACAAAGTCCTTG...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
CDS-3UTR CAA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGTTGACAACAGTTGCGTaGGCCATATTTGCATTTCCG +
Preference number: 5 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWLTTVA*AIFAFP
Trigger: CGGAAATGCAAATATGGCCAACGCAACTGTTGTCAA...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR CAA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTCAAGTACAATACATCTaGCTAGGCGTCATTCACCCT +
Preference number: 5 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTQVQYI*LGVIHP
Trigger: AGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCGCATCCTGTGTTGCTTaGACAACAGTTGCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSASCVA*TTVALA
Trigger: GGCCAACGCAACTGTTGTCAAAGCAACACAGGATGC...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354356.8
CDS TCA 90 bp GTGTCTGGAGGTTCCAAGAAAACAATACATGATAACAGGGTAAAATaGAGAGTACAGGCCAAATATTGGAGGCACAGCTGCCAGCATTGC +
Preference number: 5 (lower is better)
Translates to: VSGGSKKTIHDNRVK*RVQAKYWRHSCQHC
Trigger: GCAATGCTGGCAGCTGTGCCTCCAATATTTGGCCTGTACTCTTCATTTTACCCTGTTATCATGTATTGTTTTCTTGGAACCTCCAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000306312.8
ENST00000339444.10
ENST00000354356.8
ENST00000356767.8
ENST00000393723.2
ENST00000393727.5
ENST00000393730.5
ENST00000393735.6
ENST00000423416.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS TCA 90 bp AGATGGTCTGGGGCAATGATTCAAAGAGGAATCCAGTTGCTAATATaGCCAGCAGAATCATTAATGAGGCCAAACAACCTGCAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: RWSGAMIQRGIQLLI*PAESLMRPNNLQAV
Trigger: CACAGCTTGCAGGTTGTTTGGCCTCATTAATGATTCTGCTGGTCATATTAGCAACTGGATTCCTCTTTGAATCATTGCCCCAGACCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393723.2
ENST00000393730.5
ENST00000423416.5
ENST00000432958.6
CDS-3UTR CAA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCATAGTACCTCTGGGTaGCTGCAAGGATTTCATTTT +
Preference number: 5 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWHSTSG*LQGFHF
Trigger: AAAATGAAATCCTTGCAGCAACCCAGAGGTACTATG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp CTGCATCATGAATGCTGTGGAACAGCAGCTCCCATAGGGCAGGATTTTCAAAAACATAGTACCTCTGGGTaGCTGCAAGGATTTCATTTT +
Preference number: 5 (lower is better)
Translates to: LHHECCGTAAPIGQDFQKHSTSG*LQGFHF
Trigger: AAAATGAAATCCTTGCAGCAACCCAGAGGTACTATG...TTTTTGAAAATCCTGCCCTATGGGAGCTGCTGTTCCACAGCATTCATGATGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp TATTTTACTTCACCATCCTCTTCTTCAGGCTTGGTAGCATCCTCTCCATCTACTCAGGAACCTTGTCCTTaGTGTGTAGTCTTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: YFTSPSSSSGLVASSPSTQEPCP*CVVFPG
Trigger: TCCAGGAAAGACTACACACAAAGGACAAGGTTCCTG...AGTAGATGGAGAGGATGCTACCAAGCCTGAAGAAGAGGATGGTGAAGTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp TGTGCACTGCATCCTGCTAAGTATACATATATACCGACGTCTCCATATTCTTTTAGTACAGGCCAAATATaGGAGGCACAGCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: CALHPAKYTYIPTSPYSFSTGQI*EAQLPA
Trigger: TGCTGGCAGCTGTGCCTCCAATATTTGGCCTGTACT...AAAAGAATATGGAGACGTCGGTATATATGTATACTTAGCAGGATGCAGTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCCTCTGTGCCATTGGTaGCATTTACTCCTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSPLCHW*HLLLLE
Trigger: TTCCAGGAGGAGTAAATGCAACCAATGGCACAGAGG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp CATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCCTCTGTGCCATTGGTaGCATTTACTCCTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: HIYRRLHILLQSLPEFSLPLCHW*HLLLLE
Trigger: TTCCAGGAGGAGTAAATGCAACCAATGGCACAGAGG...GAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp ATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCCCTCTGTGCCATTGGTaGCATTTACTCCTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: IYTDVSIFFYNPCQSFHSPLCHW*HLLLLE
Trigger: TTCCAGGAGGAGTAAATGCAACCAATGGCACAGAGG...GGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp CATCAGTTTCAGGAAGCTTTCCAAGGACTTTGTAGCTTGGACTCTGTGTTCTGTTTATTTGCTAAGGTCTaGGCCATGGAGATGGTCACT +
Preference number: 5 (lower is better)
Translates to: HQFQEAFQGLCSLDSVFCLFAKV*AMEMVT
Trigger: AGTGACCATCTCCATGGCCAAGACCTTAGCAAATAA...ACAGAACACAGAGTCCAAGCTACAAAGTCCTTGGAAAGCTTCCTGAAACTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR CAA 90 bp CAGTTTCAGGAAGCTTTCCAAGGACTTTGTAGCTTGGACTCTGTGTTCTGTAAAGGTAGCCATGTTTATTaGCTAAGGTCTTGGCCATGG +
Preference number: 5 (lower is better)
Translates to: QFQEAFQGLCSLDSVFCKGSHVY*LRSWPW
Trigger: CCATGGCCAAGACCTTAGCAAATAAACATGGCTACC...TTTACAGAACACAGAGTCCAAGCTACAAAGTCCTTGGAAAGCTTCCTGAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR CAA 90 bp CCTCATATGCGTCTATATCAATATACACATCAGTTTCAGGAAGCTTTCCAAGGAAGTGAGCCAATGGAATaGCACAGTCCCAGGGCAATG +
Preference number: 5 (lower is better)
Translates to: PHMRLYQYTHQFQEAFQGSEPME*HSPRAM
Trigger: CATTGCCCTGGGACTGTGCAATTCCATTGGCTCACT...TCCTTGGAAAGCTTCCTGAAACTGATGTGTATATTGATATAGACGCATATGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR CAA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACATGGTCAGCTCTATTTaGCTGGTTCTCCAGAAAAAG +
Preference number: 5 (lower is better)
Translates to: STIHLARRHSPSKSSLDYMVSSI*LVLQKK
Trigger: CTTTTTCTGGAGAACCAGCAAAATAGAGCTGACCAT...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000445809.5
CDS-3UTR CAA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCAAGGACTTTGTAGCTaGGACTCTGTGTTCTGTAAA +
Preference number: 5 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWQGLCS*DSVFCK
Trigger: TTTACAGAACACAGAGTCCAAGCTACAAAGTCCTTG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCACTTCTGCATCTGCTTaGACAACAGTTGCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSTSASA*TTVALA
Trigger: GGCCAACGCAACTGTTGTCAAAGCAGATGCAGAAGT...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306312.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR CAA 90 bp CATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCACTTCTGCATCTGCTTaGACAACAGTTGCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: HIYRRLHILLQSLPEFSLTSASA*TTVALA
Trigger: GGCCAACGCAACTGTTGTCAAAGCAGATGCAGAAGT...GAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp AGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTGGGGGCATAAATCTTaGCATTTCCTCAGGAAATGT +
Preference number: 5 (lower is better)
Translates to: STIHLARRHSPSKSSLDYWGHKS*HFLRKC
Trigger: ACATTTCCTGAGGAAATGCAAAGATTTATGCCCCCA...GTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTTGGGGGCATAAATCTTaGCATTTCCTCAGGAAATGT +
Preference number: 5 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTWGHKS*HFLRKC
Trigger: ACATTTCCTGAGGAAATGCAAAGATTTATGCCCCCA...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp AGGCTTCGAGACAAGGAGCATGAAATTGAAAAGGTCTGGAAGAGTGAGCCAATGTGGGGGCATAAATCTTaGCATTTCCTCAGGAAATGT +
Preference number: 5 (lower is better)
Translates to: RLRDKEHEIEKVWKSEPMWGHKS*HFLRKC
Trigger: ACATTTCCTGAGGAAATGCAAAGATTTATGCCCCCA...CATTGGCTCACTCTTCCAGACCTTTTCAATTTCATGCTCCTTGTCTCGAAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCAGGAACCTTGTCCTTaGTGTGTAGTCTTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSQEPCP*CVVFPG
Trigger: TCCAGGAAAGACTACACACAAAGGACAAGGTTCCTG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp TTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACTAGTATTCACCCTACATATTCCTTGAATTaGTATGCTGGCAGCCATTTA +
Preference number: 5 (lower is better)
Translates to: LLGVIHPPNQAWTTSIHPTYSLN*YAGSHL
Trigger: TAAATGGCTGCCAGCATACAAATTCAAGGAATATGT...AGGGTGAATACTAGTAGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp ATACATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTGGCCTCTGTGCCATaGGTTGCATTTACTCCTCCT +
Preference number: 5 (lower is better)
Translates to: IHIYRRLHILLQSLPEFSLASVP*VAFTPP
Trigger: AGGAGGAGTAAATGCAACCAATGGCACAGAGGCCAG...TGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTCTCATTAAACTCCTaGCCACCCAACAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSLSLNS*PPNSKP
Trigger: TGGTTTGCTGTTGGGTGGCAAGGAGTTTAATGAGAG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp TCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCAGAGCTCCAACGACATCCACATaGTATGATTCTTTCAAGTTA +
Preference number: 5 (lower is better)
Translates to: SEVLSDLAEVTPLTDSRAPTTST*YDSFKL
Trigger: TAACTTGAAAGAATCATACAATGTGGATGTCGTTGG...AGCTCTGGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCGGTAGCCATGTTTATTaGCTAAGGTCTTGGCCATGG +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSGSHVY*LRSWPW
Trigger: CCATGGCCAAGACCTTAGCAAATAAACATGGCTACC...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CAA 90 bp GCATCTGCTTTGACAACAGTTGCGTTGGCCATATTTGCATTTCCGACTTCCTTAATGGTCAGCTCTATTTaGCTGGTTCTCCAGAAAAAG +
Preference number: 5 (lower is better)
Translates to: ASALTTVALAIFAFPTSLMVSSI*LVLQKK
Trigger: CTTTTTCTGGAGAACCAGCAAAATAGAGCTGACCAT...TAAGGAAGTCGGAAATGCAAATATGGCCAACGCAACTGTTGTCAAAGCAGATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACATATTCCTTGAATTaGTATGCTGGCAGCCATTTA +
Preference number: 5 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWTYSLN*YAGSHL
Trigger: TAAATGGCTGCCAGCATACAAATTCAAGGAATATGT...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTACATATTCCTTGAATTaGTATGCTGGCAGCCATTTA +
Preference number: 5 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTTYSLN*YAGSHL
Trigger: TAAATGGCTGCCAGCATACAAATTCAAGGAATATGT...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp AGGCTTCGAGACAAGGAGCATGAAATTGAAAAGGTCTGGAAGAGTGAGCCAATGACATATTCCTTGAATTaGTATGCTGGCAGCCATTTA +
Preference number: 5 (lower is better)
Translates to: RLRDKEHEIEKVWKSEPMTYSLN*YAGSHL
Trigger: TAAATGGCTGCCAGCATACAAATTCAAGGAATATGT...CATTGGCTCACTCTTCCAGACCTTTTCAATTTCATGCTCCTTGTCTCGAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp CAAAGTTCAGAAGTGTTAAGTGACTTGGCTGAGGTCACCCCACTAACAGATTCCCCAACGACATCCACATaGTATGATTCTTTCAAGTTA +
Preference number: 5 (lower is better)
Translates to: QSSEVLSDLAEVTPLTDSPTTST*YDSFKL
Trigger: TAACTTGAAAGAATCATACAATGTGGATGTCGTTGG...GGAATCTGTTAGTGGGGTGACCTCAGCCAAGTCACTTAACACTTCTGAACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339444.10
ENST00000356767.8
ENST00000393735.6
CDS-3UTR CAA 90 bp CAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGACTCCAACGACATCCACATaGTATGATTCTTTCAAGTTA +
Preference number: 5 (lower is better)
Translates to: QVQYILLGVIHPPNQAWTPTTST*YDSFKL
Trigger: TAACTTGAAAGAATCATACAATGTGGATGTCGTTGG...AGTCCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp ACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCTGGCCAACGACATCCACATaGTATGATTCTTTCAAGTTA +
Preference number: 5 (lower is better)
Translates to: TQVQYILLGVIHPPNQAWPTTST*YDSFKL
Trigger: TAACTTGAAAGAATCATACAATGTGGATGTCGTTGG...CCAGGCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp ACTGAAAATCCAACGATGGCTATGGCAATGGCATCTACGTACACAAGGTGGAAGCCAACGACATCCACATaGTATGATTCTTTCAAGTTA +
Preference number: 5 (lower is better)
Translates to: TENPTMAMAMASTYTRWKPTTST*YDSFKL
Trigger: TAACTTGAAAGAATCATACAATGTGGATGTCGTTGG...CTTCCACCTTGTGTACGTAGATGCCATTGCCATAGCCATCGTTGGATTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456463.5
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCTTATTTGCTAAGGTCTaGGCCATGGAGATGGTCACT +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSLFAKV*AMEMVT
Trigger: AGTGACCATCTCCATGGCCAAGACCTTAGCAAATAA...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000454864.5
CDS-3UTR CAA 90 bp ACATTGTATGATTCTTTCAAGTTAAACCCAGCTGAAATGCCAGTTCCCATTACGAACATTCCCTTCAGGTaGACAATCACAATGGCCGAC +
Preference number: 5 (lower is better)
Translates to: TLYDSFKLNPAEMPVPITNIPFR*TITMAD
Trigger: GTCGGCCATTGTGATTGTCAACCTGAAGGGAATGTT...CGTAATGGGAACTGGCATTTCAGCTGGGTTTAACTTGAAAGAATCATACAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000456463.5
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCTTGACAACAGTTGCGTaGGCCATATTTGCATTTCCG +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSLTTVA*AIFAFP
Trigger: CGGAAATGCAAATATGGCCAACGCAACTGTTGTCAA...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCAAGTACAATACATCTaGCTAGGCGTCATTCACCCT +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSQVQYI*LGVIHP
Trigger: AGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp CATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCAAGTACAATACATCTaGCTAGGCGTCATTCACCCT +
Preference number: 5 (lower is better)
Translates to: HIYRRLHILLQSLPEFSLQVQYI*LGVIHP
Trigger: AGGGTGAATGACGCCTAGCAAGATGTATTGTACTTG...GAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCATAGTACCTCTGGGTaGCTGCAAGGATTTCATTTT +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSHSTSG*LQGFHF
Trigger: AAAATGAAATCCTTGCAGCAACCCAGAGGTACTATG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp ATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCCATAGTACCTCTGGGTaGCTGCAAGGATTTCATTTT +
Preference number: 5 (lower is better)
Translates to: IYTDVSIFFYNPCQSFHSHSTSG*LQGFHF
Trigger: AAAATGAAATCCTTGCAGCAACCCAGAGGTACTATG...GGAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp TGTGCACTGCATCCTGCTAAGTATACATATATACCGACGTCTCCATATTCTTTTCCTAGGGAACACACGTaGAGGTTTTTAACATTCTGC +
Preference number: 5 (lower is better)
Translates to: CALHPAKYTYIPTSPYSFPREHT*RFLTFC
Trigger: GCAGAATGTTAAAAACCTCAACGTGTGTTCCCTAGG...AAAAGAATATGGAGACGTCGGTATATATGTATACTTAGCAGGATGCAGTGCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423416.5
ENST00000454864.5
CDS-3UTR CAA 90 bp CCATCTACTTCTGCATCCTTTCGTTTTAATGCATTGCTATACAAGTCGCTATTTCTCTCATTAAACTCCTaGCCACCCAACAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: PSTSASFRFNALLYKSLFLSLNS*PPNSKP
Trigger: TGGTTTGCTGTTGGGTGGCAAGGAGTTTAATGAGAG...AAATAGCGACTTGTATAGCAATGCATTAAAACGAAAGGATGCAGAAGTAGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454864.5
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCAAGGACTTTGTAGCTaGGACTCTGTGTTCTGTAAA +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSQGLCS*DSVFCK
Trigger: TTTACAGAACACAGAGTCCAAGCTACAAAGTCCTTG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCTGGGGGCATAAATCTTaGCATTTCCTCAGGAAATGT +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSWGHKS*HFLRKC
Trigger: ACATTTCCTGAGGAAATGCAAAGATTTATGCCCCCA...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp CATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCTGGGGGCATAAATCTTaGCATTTCCTCAGGAAATGT +
Preference number: 5 (lower is better)
Translates to: HIYRRLHILLQSLPEFSLWGHKS*HFLRKC
Trigger: ACATTTCCTGAGGAAATGCAAAGATTTATGCCCCCA...GAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS TCA 90 bp AGGAATGCATACGATAACTTGGTGTCAGAGTTTGCTTCATGTCATTaGAACTCATGTCAGTACTTGGTGCCAAAACAAATCACAAGAGGA +
Preference number: 5 (lower is better)
Translates to: RNAYDNLVSEFASCH*NSCQYLVPKQITRG
Trigger: TCCTCTTGTGATTTGTTTTGGCACCAAGTACTGACATGAGTTTCAATGACATGAAGCAAACTCTGACACCAAGTTATCGTATGCATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487407.1
CDS-3UTR CAA 90 bp GTGAGGTCATTCACAACTTGTGCACTGCATCCTGCTAAGTATACATATATACCGCCAACGACATCCACATaGTATGATTCTTTCAAGTTA +
Preference number: 5 (lower is better)
Translates to: VRSFTTCALHPAKYTYIPPTTST*YDSFKL
Trigger: TAACTTGAAAGAATCATACAATGTGGATGTCGTTGG...CGGTATATATGTATACTTAGCAGGATGCAGTGCACAAGTTGTGAATGACCTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCACATATTCCTTGAATTaGTATGCTGGCAGCCATTTA +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSTYSLN*YAGSHL
Trigger: TAAATGGCTGCCAGCATACAAATTCAAGGAATATGT...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp AAAAACACAAGTACAATACATCTTGCTAGGCGTCATTCACCCTCCAAATCAAGCCCAACGACATCCACATaGTATGATTCTTTCAAGTTA +
Preference number: 5 (lower is better)
Translates to: KNTSTIHLARRHSPSKSSPTTST*YDSFKL
Trigger: TAACTTGAAAGAATCATACAATGTGGATGTCGTTGG...GCTTGATTTGGAGGGTGAATGACGCCTAGCAAGATGTATTGTACTTGTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306312.8
ENST00000354356.8
ENST00000393730.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS-3UTR CAA 90 bp CATATATACCGACGTCTCCATATTCTTTTACAATCCCTGCCAGAGTTTTCACTCCCAACGACATCCACATaGTATGATTCTTTCAAGTTA +
Preference number: 5 (lower is better)
Translates to: HIYRRLHILLQSLPEFSLPTTST*YDSFKL
Trigger: TAACTTGAAAGAATCATACAATGTGGATGTCGTTGG...GAGTGAAAACTCTGGCAGGGATTGTAAAAGAATATGGAGACGTCGGTATATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423416.5
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
CDS TCA 72 bp AGCCAGATGGTCTGTGTCTTCCCACCGGTTCCCTCCTaGACAAGGCTTCGAGACAAGGAGCATGAAATTGAA +
Preference number: 6 (lower is better)
Translates to: SQMVCVFPPVPS*TRLRDKEHEIE
Trigger: TTCAATTTCATGCTCCTTGTCTCGAAGCCTTGTTCAGGAGGGAACCGGTGGGAAGACACAGACCATCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454864.5
CDS CCA 72 bp TCACAGACATGGCGACTTTCACTCTCAAGGCATCTCTaGCCTCTGTGCCATTGGTTGCATTTACTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: SQTWRLSLSRHL*PLCHWLHLLLL
Trigger: CAGGAGGAGTAAATGCAACCAATGGCACAGAGGCCAGAGATGCCTTGAGAGTGAAAGTCGCCATGTCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000306312.8
ENST00000339444.10
ENST00000354356.8
ENST00000356767.8
ENST00000393723.2
ENST00000393727.5
ENST00000393729.5
ENST00000393730.5
ENST00000393735.6
ENST00000423416.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
ENST00000487407.1
CDS GCA 72 bp CAAAGGCTAAGCCTTGAGGAAGCTGAAGCACCCCTGTaGTTATGCCTGAGACCAAGTCACCCAACACATATT +
Preference number: 6 (lower is better)
Translates to: QRLSLEEAEAPL*LCLRPSHPTHI
Trigger: AATATGTGTTGGGTGACTTGGTCTCAGGCATAAGCACAGGGGTGCTTCAGCTTCCTCAAGGCTTAGCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000306312.8
ENST00000339444.10
ENST00000354356.8
ENST00000356767.8
ENST00000393723.2
ENST00000393727.5
ENST00000393730.5
ENST00000393735.6
ENST00000423416.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS GCA 72 bp CAGCAAAAGGACCTTGAGGAAGCTGAAGCACCCCTGTaGTTATGCCTGAGACCAAGTCACCCAACACATATT +
Preference number: 6 (lower is better)
Translates to: QQKDLEEAEAPL*LCLRPSHPTHI
Trigger: AATATGTGTTGGGTGACTTGGTCTCAGGCATAAGCACAGGGGTGCTTCAGCTTCCTCAAGGTCCTTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393729.5
ENST00000456463.5
ENST00000487407.1
CDS CCA 72 bp GTCATCTCTGCCGGGACATTCACACCCATTCCAATCTaGGCACTCACCTCTGTGTTCTGTAAATCACAGTCA +
Preference number: 6 (lower is better)
Translates to: VISAGTFTPIPI*ALTSVFCKSQS
Trigger: TGACTGTGATTTACAGAACACAGAGGTGAGTGCCCAGATTGGAATGGGTGTGAATGTCCCGGCAGAGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487407.1
CDS CAA 90 bp GGAATAGGCGCCGGCAATTTCTCTTTAAATCTCTCATTAAACTCCTaGCCACCCAACAGCAAACCAAAAACCATCAGCCCGACGCCTAGG +
Preference number: 6 (lower is better)
Translates to: GIGAGNFSLNLSLNS*PPNSKPKTISPTPR
Trigger: CCTAGGCGTCGGGCTGATGGTTTTTGGTTTGCTGTTGGGTGGCAAGGAGTTTAATGAGAGATTTAAAGAGAAATTGCCGGCGCCTATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000306312.8
ENST00000339444.10
ENST00000354356.8
ENST00000356767.8
ENST00000393723.2
ENST00000393727.5
ENST00000393729.5
ENST00000393730.5
ENST00000393735.6
ENST00000423416.5
ENST00000432958.6
ENST00000454864.5
CDS TCA 72 bp GCCTTGAGGAAGCTGAAGCACCCCTGTGCTTATGCCTaGGACCAAGTCACCCAACACATATTCCTTGAATTT +
Preference number: 6 (lower is better)
Translates to: ALRKLKHPCAYA*DQVTQHIFLEF
Trigger: AAATTCAAGGAATATGTGTTGGGTGACTTGGTCTCAGGCATAAGCACAGGGGTGCTTCAGCTTCCTCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000306312.8
ENST00000339444.10
ENST00000354356.8
ENST00000356767.8
ENST00000393723.2
ENST00000393727.5
ENST00000393730.5
ENST00000393735.6
ENST00000423416.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
CDS GCA 72 bp CTGTGTTGCTTTGACAACAGTTGCGTTGGCCATATTTaGATTTCCGACTTCCTTAGCGTACTTCCGCATGGC +
Preference number: 6 (lower is better)
Translates to: LCCFDNSCVGHI*ISDFLSVLPHG
Trigger: GCCATGCGGAAGTACGCTAAGGAAGTCGGAAATGCAAATATGGCCAACGCAACTGTTGTCAAAGCAACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354356.8
ENST00000393723.2
ENST00000393727.5
CDS CAA 90 bp GACATGGCGACTTTCACTCTCAAGGCATCTCTGGCCTCTGTGCCATaGGTTGCATTTACTCCTCCTGGAATGACTATATCATCTGGTACT +
Preference number: 6 (lower is better)
Translates to: DMATFTLKASLASVP*VAFTPPGMTISSGT
Trigger: AGTACCAGATGATATAGTCATTCCAGGAGGAGTAAATGCAACCAATGGCACAGAGGCCAGAGATGCCTTGAGAGTGAAAGTCGCCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000306312.8
ENST00000339444.10
ENST00000354356.8
ENST00000356767.8
ENST00000393723.2
ENST00000393727.5
ENST00000393729.5
ENST00000393730.5
ENST00000393735.6
ENST00000423416.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
ENST00000487407.1
CDS CAA 90 bp GGAATAGGCGCCGGCAATTTCTCTTTAAATCTCTCATTAAACTCCTaGCCACCCAACAGCAAACCAAAAACCATCAGCCCGACGCATACA +
Preference number: 6 (lower is better)
Translates to: GIGAGNFSLNLSLNS*PPNSKPKTISPTHT
Trigger: TGTATGCGTCGGGCTGATGGTTTTTGGTTTGCTGTTGGGTGGCAAGGAGTTTAATGAGAGATTTAAAGAGAAATTGCCGGCGCCTATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445809.5
ENST00000456463.5
ENST00000487407.1
CDS TCA 72 bp ACCTTGAGGAAGCTGAAGCACCCCTGTGCTTATGCCTaGGACCAAGTCACCCAACACATATTCCTTGAATTT +
Preference number: 6 (lower is better)
Translates to: TLRKLKHPCAYA*DQVTQHIFLEF
Trigger: AAATTCAAGGAATATGTGTTGGGTGACTTGGTCTCAGGCATAAGCACAGGGGTGCTTCAGCTTCCTCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393729.5
ENST00000456463.5
ENST00000487407.1
CDS CAA 90 bp AACAGCAAACCAAAAACCATCAGCCCGACGCCTAGGGAACACACGTaGAGGTTTTTAACATTCTGCAACACAGCAACTGTACTATACACC +
Preference number: 6 (lower is better)
Translates to: NSKPKTISPTPREHT*RFLTFCNTATVLYT
Trigger: GGTGTATAGTACAGTTGCTGTGTTGCAGAATGTTAAAAACCTCAACGTGTGTTCCCTAGGCGTCGGGCTGATGGTTTTTGGTTTGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000306312.8
ENST00000339444.10
ENST00000354356.8
ENST00000356767.8
ENST00000393723.2
ENST00000393727.5
ENST00000393729.5
ENST00000393730.5
ENST00000393735.6
ENST00000423416.5
ENST00000432958.6
ENST00000454864.5
CDS CAA 90 bp TCCACTTCTACCAACTTAAACTTTGGTCTACACCTAAAGTCAACATaGTCATCTCTGCCGGGACATTCACACCCATTCCAATCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: STSTNLNFGLHLKST*SSLPGHSHPFQSGH
Trigger: GTGCCCAGATTGGAATGGGTGTGAATGTCCCGGCAGAGATGACAATGTTGACTTTAGGTGTAGACCAAAGTTTAAGTTGGTAGAAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487407.1
CDS CAA 72 bp ACTTTCACTCTCAAGGCATCTCTGGCCTCTGTGCCATaGGTTGCATTTACTCCTCCTGGAATGACTATATCA +
Preference number: 6 (lower is better)
Translates to: TFTLKASLASVP*VAFTPPGMTIS
Trigger: TGATATAGTCATTCCAGGAGGAGTAAATGCAACCAATGGCACAGAGGCCAGAGATGCCTTGAGAGTGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000306312.8
ENST00000339444.10
ENST00000354356.8
ENST00000356767.8
ENST00000393723.2
ENST00000393727.5
ENST00000393729.5
ENST00000393730.5
ENST00000393735.6
ENST00000423416.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
ENST00000487407.1
CDS CAA 72 bp ACTTCTGCATCCTGTGTTGCTTTGACAACAGTTGCGTaGGCCATATTTGCATTTCCGACTTCCTTAGCGTAC +
Preference number: 6 (lower is better)
Translates to: TSASCVALTTVA*AIFAFPTSLAY
Trigger: GTACGCTAAGGAAGTCGGAAATGCAAATATGGCCAACGCAACTGTTGTCAAAGCAACACAGGATGCAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354356.8
ENST00000393723.2
ENST00000393727.5
CDS CAA 90 bp ACCCCTGTGCTTATGCCTGAGACCAAGTCACCCAACACATATTCCTaGAATTTGTATGCTGGCAGCCATTTAGTTATGGGTAGGAACATA +
Preference number: 6 (lower is better)
Translates to: TPVLMPETKSPNTYS*NLYAGSHLVMGRNI
Trigger: TATGTTCCTACCCATAACTAAATGGCTGCCAGCATACAAATTCAAGGAATATGTGTTGGGTGACTTGGTCTCAGGCATAAGCACAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000306312.8
ENST00000339444.10
ENST00000354356.8
ENST00000356767.8
ENST00000393723.2
ENST00000393727.5
ENST00000393729.5
ENST00000393730.5
ENST00000393735.6
ENST00000423416.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
ENST00000487407.1
CDS TCA 72 bp CCTCTGTGCCATTGGTTGCATTTACTCCTCCTGGAATaGCTATATCATCTGGTACTAATCGAACAGCTACAC +
Preference number: 6 (lower is better)
Translates to: PLCHWLHLLLLE*LYHLVLIEQLH
Trigger: GTGTAGCTGTTCGATTAGTACCAGATGATATAGTCATTCCAGGAGGAGTAAATGCAACCAATGGCACAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000306312.8
ENST00000339444.10
ENST00000354356.8
ENST00000356767.8
ENST00000393723.2
ENST00000393727.5
ENST00000393729.5
ENST00000393730.5
ENST00000393735.6
ENST00000423416.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
ENST00000487407.1
CDS GCA 72 bp ACGCCTAGGGAACACACGTTGAGGTTTTTAACATTCTaGAACACAGCAACTGTACTATACACCACGGAAAAG +
Preference number: 6 (lower is better)
Translates to: TPREHTLRFLTF*NTATVLYTTEK
Trigger: CTTTTCCGTGGTGTATAGTACAGTTGCTGTGTTGCAGAATGTTAAAAACCTCAACGTGTGTTCCCTAGGCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000306312.8
ENST00000339444.10
ENST00000354356.8
ENST00000356767.8
ENST00000393723.2
ENST00000393727.5
ENST00000393729.5
ENST00000393730.5
ENST00000393735.6
ENST00000423416.5
ENST00000432958.6
ENST00000454864.5
CDS GCA 72 bp ATCTACTTCTGCATCCTGTGTTGCTTTGACAACAGTTaGGTTGGCCATATTTGCATTTCCGACTTCCTTAGC +
Preference number: 6 (lower is better)
Translates to: IYFCILCCFDNS*VGHICISDFLS
Trigger: GCTAAGGAAGTCGGAAATGCAAATATGGCCAACGCAACTGTTGTCAAAGCAACACAGGATGCAGAAGTAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354356.8
ENST00000393723.2
ENST00000393727.5
CDS CAA 72 bp CTTATGCCTGAGACCAAGTCACCCAACACATATTCCTaGAATTTGTATGCTGGCAGCCATTTAGTTATGGGT +
Preference number: 6 (lower is better)
Translates to: LMPETKSPNTYS*NLYAGSHLVMG
Trigger: ACCCATAACTAAATGGCTGCCAGCATACAAATTCAAGGAATATGTGTTGGGTGACTTGGTCTCAGGCATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000306312.8
ENST00000339444.10
ENST00000354356.8
ENST00000356767.8
ENST00000393723.2
ENST00000393727.5
ENST00000393729.5
ENST00000393730.5
ENST00000393735.6
ENST00000423416.5
ENST00000432958.6
ENST00000445809.5
ENST00000454864.5
ENST00000456463.5
ENST00000487407.1
CDS CAA 72 bp ACCAACTTAAACTTTGGTCTACACCTAAAGTCAACATaGTCATCTCTGCCGGGACATTCACACCCATTCCAA +
Preference number: 6 (lower is better)
Translates to: TNLNFGLHLKST*SSLPGHSHPFQ
Trigger: TTGGAATGGGTGTGAATGTCCCGGCAGAGATGACAATGTTGACTTTAGGTGTAGACCAAAGTTTAAGTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487407.1
CDS CAA 72 bp GTGGAAGGAATGCATACGATAACTTGGTGTCAGAGTTaGCTTCATGTCATTGAAACTCATGTCAGTACTTGG +
Preference number: 6 (lower is better)
Translates to: VEGMHTITWCQS*LHVIETHVSTW
Trigger: CCAAGTACTGACATGAGTTTCAATGACATGAAGCAAACTCTGACACCAAGTTATCGTATGCATTCCTTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487407.1
CDS CAA 90 bp GAAATGACAGTGGAAGGAATGCATACGATAACTTGGTGTCAGAGTTaGCTTCATGTCATTGAAACTCATGTCAGTACTTGGTGCCAAAAC +
Preference number: 6 (lower is better)
Translates to: EMTVEGMHTITWCQS*LHVIETHVSTWCQN
Trigger: GTTTTGGCACCAAGTACTGACATGAGTTTCAATGACATGAAGCAAACTCTGACACCAAGTTATCGTATGCATTCCTTCCACTGTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487407.1