RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC26A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000091138

Ensembl transcript IDs: ENST00000340010.10, ENST00000379083.7, ENST00000453332.1, ENST00000469651.1

Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGCTGCATTTTGGAAATTGGGTCCTGAACACGATGGTTAGCAGTTaGAATGCCACACTAGCTGCCAGGCCTAACCCGAGTCCCAGGACA +
Preference number: 1 (lower is better)
Translates to: VLHFGNWVLNTMVSS*NATLAARPNPSPRT
Trigger: TGTCCTGGGACTCGGGTTAGGCCTGGCAGCTAGTGTGGCATTTCAACTGCTAACCATCGTGTTCAGGACCCAATTTCCAAAATGCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR GCA 90 bp AGACGCTGGCAACTGAAAAGGCCACTGCAAATGCAACCATTGCGATaGCGAAGCAATCTCCTACGGTGTTTTGGAAAGTCTCCACGTCAG +
Preference number: 1 (lower is better)
Translates to: RRWQLKRPLQMQPLR*RSNLLRCFGKSPRQ
Trigger: CTGACGTGGAGACTTTCCAAAACACCGTAGGAGATTGCTTCGGCATCGCAATGGTTGCATTTGCAGTGGCCTTTTCAGTTGCCAGCGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR TCA 90 bp CCTGAACTGCTGATCTGGAGAGGGCAGTACTCCCAGCAAATCCTCTaGATACTCCACAGACTATGTTACCCAGTCCCAAGGCTATTAACT +
Preference number: 1 (lower is better)
Translates to: PELLIWRGQYSQQIL*ILHRLCYPVPRLLT
Trigger: AGTTAATAGCCTTGGGACTGGGTAACATAGTCTGTGGAGTATTCAGAGGATTTGCTGGGAGTACTGCCCTCTCCAGATCAGCAGTTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR TCA 90 bp GCCATCAAGTGGATAATCGTATTTGAGGGAATAGACGCTGGCAACTaGAAAGGCCACTGCAAATGCAACCATTGCGATGCCGAAGCAATC +
Preference number: 1 (lower is better)
Translates to: AIKWIIVFEGIDAGN*KGHCKCNHCDAEAI
Trigger: GATTGCTTCGGCATCGCAATGGTTGCATTTGCAGTGGCCTTTTCAGTTGCCAGCGTCTATTCCCTCAAATACGATTATCCACTTGATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR TCA 90 bp CCAAGGCTATTAACTCCTGATTGCCATCAAGTGGATAATCGTATTTaGGGGAATAGACGCTGGCAACTGAAAAGGCCACTGCAAATGCAA +
Preference number: 1 (lower is better)
Translates to: PRLLTPDCHQVDNRI*GNRRWQLKRPLQMQ
Trigger: TTGCATTTGCAGTGGCCTTTTCAGTTGCCAGCGTCTATTCCCTCAAATACGATTATCCACTTGATGGCAATCAGGAGTTAATAGCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR GCA 90 bp CAATCATATTTGTCCTTTCGCCACAATCTGCCTATTTCAGCAAACTaGATCAGCATTCCCTTTAAGTTTCCCAATGCTAAAGCTGCCAGG +
Preference number: 1 (lower is better)
Translates to: QSYLSFRHNLPISAN*ISIPFKFPNAKAAR
Trigger: CCTGGCAGCTTTAGCATTGGGAAACTTAAAGGGAATGCTGATGCAGTTTGCTGAAATAGGCAGATTGTGGCGAAAGGACAAATATGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR GCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATaGATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAA +
Preference number: 1 (lower is better)
Translates to: NYEIQNSGATILLNL*MKVVTRMEICQCYK
Trigger: TTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
3UTR CCA 90 bp ACCTGCTGCAATCACGGTCATAATGAATTCGATTGGAATGGGCACTaGAAGTTTGTCTTTGAAGCGCTGATTTATTTCTTTAACAATGGA +
Preference number: 1 (lower is better)
Translates to: TCCNHGHNEFDWNGH*KFVFEALIYFFNNG
Trigger: TCCATTGTTAAAGAAATAAATCAGCGCTTCAAAGACAAACTTCCAGTGCCCATTCCAATCGAATTCATTATGACCGTGATTGCAGCAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR GCA 90 bp AAAGCCAACAGCATCGATAAGTTTCCGCCTAAAGAAACCAATGTTTaGAAAGTAGATAGGAGATGGACATCTGAAAATTTTCACTCCTTC +
Preference number: 1 (lower is better)
Translates to: KANSIDKFPPKETNV*KVDRRWTSENFHSF
Trigger: GAAGGAGTGAAAATTTTCAGATGTCCATCTCCTATCTACTTTGCAAACATTGGTTTCTTTAGGCGGAAACTTATCGATGCTGTTGGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR TCA 90 bp ATGAATTCGATTGGAATGGGCACTGGAAGTTTGTCTTTGAAGCGCTaGTTTATTTCTTTAACAATGGATACAACCAAAAGGACAATCAGA +
Preference number: 1 (lower is better)
Translates to: MNSIGMGTGSLSLKR*FISLTMDTTKRTIR
Trigger: TCTGATTGTCCTTTTGGTTGTATCCATTGTTAAAGAAATAAATCAGCGCTTCAAAGACAAACTTCCAGTGCCCATTCCAATCGAATTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR CCA 90 bp AAGTTTCCGCCTAAAGAAACCAATGTTTGCAAAGTAGATAGGAGATaGACATCTGAAAATTTTCACTCCTTCTGGCTCATACATATCATA +
Preference number: 1 (lower is better)
Translates to: KFPPKETNVCKVDRR*TSENFHSFWLIHII
Trigger: TATGATATGTATGAGCCAGAAGGAGTGAAAATTTTCAGATGTCCATCTCCTATCTACTTTGCAAACATTGGTTTCTTTAGGCGGAAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR TCA 90 bp TGCAGTTTTCGGATTTTCCTCAAAGCTTTGTTGCGCTTGCGTAGAATTCGAAGTAGAAAGCACTGTGACTaGTGCCGCCGCCGCCACCCT +
Preference number: 2 (lower is better)
Translates to: CSFRIFLKALLRLRRIRSRKHCD*CRRRHP
Trigger: AGGGTGGCGGCGGCGGCATCAGTCACAGTGCTTTCT...ACTTCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR CAA 90 bp TGCAAATGCAACCATTGCGATGCCGAAGCAATCTCCTACGGTGTTTaGGAAAGTCTCCACGTCAGGTGTAATAGGGGGCTGAAATCCAGG +
Preference number: 2 (lower is better)
Translates to: CKCNHCDAEAISYGV*ESLHVRCNRGLKSR
Trigger: CCTGGATTTCAGCCCCCTATTACACCTGACGTGGAGACTTTCCAAAACACCGTAGGAGATTGCTTCGGCATCGCAATGGTTGCATTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR CAA 90 bp GCCACCCTCACCCTCTCGTCATCCAGTAGTGAAGAATTATTCGAGTaGTTAGGCAATCCCAAAGTAGTTGCATTGCGATCTGGGACTGCT +
Preference number: 2 (lower is better)
Translates to: ATLTLSSSSSEELFE*LGNPKVVALRSGTA
Trigger: AGCAGTCCCAGATCGCAATGCAACTACTTTGGGATTGCCTAACAACTCGAATAATTCTTCACTACTGGATGACGAGAGGGTGAGGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR GCA 90 bp TTAGCCAGCGTGCTGCATTTTGGAAATTGGGTCCTGAACACGATGGTTAGCAGTGGCTGGGAAAAAGGATaGATACAACCCATAGACTGG +
Preference number: 2 (lower is better)
Translates to: LASVLHFGNWVLNTMVSSGWEKG*IQPIDW
Trigger: CCAGTCTATGGGTTGTATGCATCCTTTTTCCCAGCC...ACTGCTAACCATCGTGTTCAGGACCCAATTTCCAAAATGCAGCACGCTGGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR GCA 90 bp TTAGCCAGCGTGCTGCATTTTGGAAATTGGGTCCTGAACACGATGGTTAGCAGTCAATCCCAAAGTAGTTaGATTGCGATCTGGGACTGC +
Preference number: 2 (lower is better)
Translates to: LASVLHFGNWVLNTMVSSQSQSS*IAIWDC
Trigger: GCAGTCCCAGATCGCAATGCAACTACTTTGGGATTG...ACTGCTAACCATCGTGTTCAGGACCCAATTTCCAAAATGCAGCACGCTGGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR CAA 90 bp AGCAAGCCTTGCTTCTGCAGTTTTCGGATTTTCCTCAAAGCTTTGTaGCGCTTGCGTAGAATTCGAAGTGGACTAAAGCCAACAGCATCG +
Preference number: 2 (lower is better)
Translates to: SKPCFCSFRIFLKAL*RLRRIRSGLKPTAS
Trigger: CGATGCTGTTGGCTTTAGTCCACTTCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCAGAAGCAAGGCTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR GCA 90 bp CAAGCCTTGCTTCTGCAGTTTTCGGATTTTCCTCAAAGCTTTGTTGCGCTTGCGCCTTTCGCCACAATCTaGCTATTTCAGCAAACTGCA +
Preference number: 2 (lower is better)
Translates to: QALLLQFSDFPQSFVALAPFATI*LFQQTA
Trigger: TGCAGTTTGCTGAAATAGGCAGATTGTGGCGAAAGG...CGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCAGAAGCAAGGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR CAA 90 bp TGTAGCAAGCCTTGCTTCTGCAGTTTTCGGATTTTCCTCAAAGCTTaGTTGCGCTTGCGTAGAATTCGAAGTGGACTAAAGCCAACAGCA +
Preference number: 2 (lower is better)
Translates to: CSKPCFCSFRIFLKA*LRLRRIRSGLKPTA
Trigger: TGCTGTTGGCTTTAGTCCACTTCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCAGAAGCAAGGCTTGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR TCA 90 bp AGTGAAGCCACTGATGAGGGACTCAGACAGGTATATCACTACAAATCCAATCCGCCACAATCCCTGTGCTaGTACCAGAAACAATATCAC +
Preference number: 2 (lower is better)
Translates to: SEATDEGLRQVYHYKSNPPQSLC*YQKQYH
Trigger: GTGATATTGTTTCTGGTATCAGCACAGGGATTGTGG...CGGATTGGATTTGTAGTGATATACCTGTCTGAGTCCCTCATCAGTGGCTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR CCA 90 bp TTGCGATGCCGAAGCAATCTCCTACGGTGTTTTGGAAAGTCTCCACGTCAGGTGAAGGTAGATTATGGCTaGGAAAAAGGATGCATACAA +
Preference number: 2 (lower is better)
Translates to: LRCRSNLLRCFGKSPRQVKVDYG*EKGCIQ
Trigger: TTGTATGCATCCTTTTTCCCAGCCATAATCTACCTT...CACCTGACGTGGAGACTTTCCAAAACACCGTAGGAGATTGCTTCGGCATCGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR CAA 90 bp CCTTGCTTCTGCAGTTTTCGGATTTTCCTCAAAGCTTTGTTGCGCTaGCGTAGAATTCGAAGTGGACTAAAGCCAACAGCATCGATAAGT +
Preference number: 2 (lower is better)
Translates to: PCFCSFRIFLKALLR*RRIRSGLKPTASIS
Trigger: ACTTATCGATGCTGTTGGCTTTAGTCCACTTCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCAGAAGCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR TCA 90 bp CAAGCCTTGCTTCTGCAGTTTTCGGATTTTCCTCAAAGCTTTGTTGCGCTTGCGGACCTGTATAAATTATaGGATTCAAAACAGTGGCGC +
Preference number: 2 (lower is better)
Translates to: QALLLQFSDFPQSFVALADLYKL*DSKQWR
Trigger: GCGCCACTGTTTTGAATCTCATAATTTATACAGGTC...CGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCAGAAGCAAGGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR TCA 90 bp TACACCTGCTGCAATCACGGTCATAATGAATTCGATTGGAATGGGCACTGGAAGGACGGGACTGTCAACTaGAAAATGAATTTGAGTTGG +
Preference number: 2 (lower is better)
Translates to: YTCCNHGHNEFDWNGHWKDGTVN*KMNLSW
Trigger: CCAACTCAAATTCATTTTTCAGTTGACAGTCCCGTC...CTTCCAGTGCCCATTCCAATCGAATTCATTATGACCGTGATTGCAGCAGGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR TCA 90 bp AAGCTTCTCAATGAAGTCATCATCAGTTCCAACGATATACACATCTACCTTGATGCTCTCCTGAACTGCTaGTCTGGAGAGGGCAGTACT +
Preference number: 2 (lower is better)
Translates to: KLLNEVIISSNDIHIYLDALLNC*SGEGST
Trigger: AGTACTGCCCTCTCCAGATCAGCAGTTCAGGAGAGC...ATCAAGGTAGATGTGTATATCGTTGGAACTGATGATGACTTCATTGAGAAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR GCA 90 bp ATCTCCTACGGTGTTTTGGAAAGTCTCCACGTCAGGTGTAATAGGGGGCTGAAAATACTGCTAAACCTATaGATGAAGGTAGTGACTAGG +
Preference number: 2 (lower is better)
Translates to: ISYGVLESLHVRCNRGLKILLNL*MKVVTR
Trigger: CCTAGTCACTACCTTCATGCATAGGTTTAGCAGTAT...TTTCAGCCCCCTATTACACCTGACGTGGAGACTTTCCAAAACACCGTAGGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR GCA 90 bp ATCTCCTACGGTGTTTTGGAAAGTCTCCACGTCAGGTGTAATAGGGGGCTGAAAAGCTGTCACCAGGTCTaGAATATTAGTCTTCTCTAT +
Preference number: 2 (lower is better)
Translates to: ISYGVLESLHVRCNRGLKSCHQV*NISLLY
Trigger: ATAGAGAAGACTAATATTGCAGACCTGGTGACAGCT...TTTCAGCCCCCTATTACACCTGACGTGGAGACTTTCCAAAACACCGTAGGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR GCA 90 bp ATAGATGTTGGTTCTTCCAATATTAGCCAGCGTGCTGCATTTTGGAAATTGGGTATGCAACCATTGCGATaGCGAAGCAATCTCCTACGG +
Preference number: 2 (lower is better)
Translates to: IDVGSSNISQRAAFWKLGMQPLR*RSNLLR
Trigger: CCGTAGGAGATTGCTTCGGCATCGCAATGGTTGCAT...ACCCAATTTCCAAAATGCAGCACGCTGGCTAATATTGGAAGAACCAACATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR GCA 90 bp CAAGCCTTGCTTCTGCAGTTTTCGGATTTTCCTCAAAGCTTTGTTGCGCTTGCGCCTATTTCAGCAAACTaGATCAGCATTCCCTTTAAG +
Preference number: 2 (lower is better)
Translates to: QALLLQFSDFPQSFVALAPISAN*ISIPFK
Trigger: CTTAAAGGGAATGCTGATGCAGTTTGCTGAAATAGG...CGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCAGAAGCAAGGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR CCA 90 bp TGCAGTTTTCGGATTTTCCTCAAAGCTTTGTTGCGCTTGCGTAGAATTCGAAGTCCACGGATATGTGTCTaGAAGTGCCGAAGAAAAGGT +
Preference number: 2 (lower is better)
Translates to: CSFRIFLKALLRLRRIRSPRICV*KCRRKG
Trigger: ACCTTTTCTTCGGCACTTCCAGACACATATCCGTGG...ACTTCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR TCA 90 bp ATAGATGTTGGTTCTTCCAATATTAGCCAGCGTGCTGCATTTTGGAAATTGGGTAACTGGATCAGTGTGTaGCGGGACTGTCAACTGAAA +
Preference number: 2 (lower is better)
Translates to: IDVGSSNISQRAAFWKLGNWISV*RDCQLK
Trigger: TTTCAGTTGACAGTCCCGTCACACACTGATCCAGTT...ACCCAATTTCCAAAATGCAGCACGCTGGCTAATATTGGAAGAACCAACATCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR GCA 90 bp ATAGATGTTGGTTCTTCCAATATTAGCCAGCGTGCTGCATTTTGGAAATTGGGTTGCAAATGCAACCATTaGGATGCCGAAGCAATCTCC +
Preference number: 2 (lower is better)
Translates to: IDVGSSNISQRAAFWKLGCKCNH*DAEAIS
Trigger: GGAGATTGCTTCGGCATCGCAATGGTTGCATTTGCA...ACCCAATTTCCAAAATGCAGCACGCTGGCTAATATTGGAAGAACCAACATCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR CCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGATACAACCCATAGACTaGGGGAATGTCGACCAGCAG +
Preference number: 2 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMIQPID*GNVDQQ
Trigger: CTGCTGGTCGACATTCCCCCAGTCTATGGGTTGTAT...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR CAA 90 bp AGTGAAGAATTATTCGAGTTGTTAGGCAATCCCAAAGTAGTTGCATaGCGATCTGGGACTGCTTTTGAAACTGCTCCTGAAACTGCTAGT +
Preference number: 2 (lower is better)
Translates to: SEELFELLGNPKVVA*RSGTAFETAPETAS
Trigger: ACTAGCAGTTTCAGGAGCAGTTTCAAAAGCAGTCCCAGATCGCAATGCAACTACTTTGGGATTGCCTAACAACTCGAATAATTCTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR TCA 90 bp GTCATCATCAGTTCCAACGATATACACATCTACCTTGATCCTGATAAATTCTTGACGATGGTTAGCAGTTaGAATGCCACACTAGCTGCC +
Preference number: 2 (lower is better)
Translates to: VIISSNDIHIYLDPDKFLTMVSS*NATLAA
Trigger: GGCAGCTAGTGTGGCATTTCAACTGCTAACCATCGT...CAAGAATTTATCAGGATCAAGGTAGATGTGTATATCGTTGGAACTGATGATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR GCA 90 bp ATCAGCATTCCCTTTAAGTTTCCCAATGCTAAAGCTGCCAGGACGGACTTTTGTATATGTGTCTGGAAGTaGCGAAGAAAAGGTAGATTA +
Preference number: 2 (lower is better)
Translates to: ISIPFKFPNAKAARTDFCICVWK*RRKGRL
Trigger: TAATCTACCTTTTCTTCGGCACTTCCAGACACATAT...ACAAAAGTCCGTCCTGGCAGCTTTAGCATTGGGAAACTTAAAGGGAATGCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR GCA 90 bp GAAACCAATGTTTGCAAAGTAGATAGGAGATGGACATCTGAAAATTTTCACTCCGCCGTAGGATACACCTaGTGCAATCACGGTCATAAT +
Preference number: 2 (lower is better)
Translates to: ETNVCKVDRRWTSENFHSAVGYT*CNHGHN
Trigger: ATTATGACCGTGATTGCAGCAGGTGTATCCTACGGC...GGAGTGAAAATTTTCAGATGTCCATCTCCTATCTACTTTGCAAACATTGGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR GCA 90 bp GTTTTCGGATTTTCCTCAAAGCTTTGTTGCGCTTGCGTAGAATTCGAAGTGGACCTATTAACTCCTGATTaGCATCAAGTGGATAATCGT +
Preference number: 2 (lower is better)
Translates to: VFGFSSKLCCACVEFEVDLLTPD*HQVDNR
Trigger: ACGATTATCCACTTGATGGCAATCAGGAGTTAATAG...GTCCACTTCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR CCA 90 bp GAAACCAATGTTTGCAAAGTAGATAGGAGATGGACATCTGAAAATTTTCACTCCGATTGGAATGGGCACTaGAAGTTTGTCTTTGAAGCG +
Preference number: 2 (lower is better)
Translates to: ETNVCKVDRRWTSENFHSDWNGH*KFVFEA
Trigger: CGCTTCAAAGACAAACTTCCAGTGCCCATTCCAATC...GGAGTGAAAATTTTCAGATGTCCATCTCCTATCTACTTTGCAAACATTGGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR CCA 90 bp AAGCTTCTCAATGAAGTCATCATCAGTTCCAACGATATACACATCTACCTTGATCCAGGAGAAATCCAATaGCTAGAACGACAATCAGCA +
Preference number: 2 (lower is better)
Translates to: KLLNEVIISSNDIHIYLDPGEIQ*LERQSA
Trigger: TGCTGATTGTCGTTCTAGCCATTGGATTTCTCCTGG...ATCAAGGTAGATGTGTATATCGTTGGAACTGATGATGACTTCATTGAGAAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR TCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGGACCTGTATAAATTATaGGATTCAAAACAGTGGCGC +
Preference number: 2 (lower is better)
Translates to: NYEIQNSGATILLNLCMKDLYKL*DSKQWR
Trigger: GCGCCACTGTTTTGAATCTCATAATTTATACAGGTC...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
3UTR CAA 90 bp TTCTCAATGAAGTCATCATCAGTTCCAACGATATACACATCTACCTaGATCCTGATAAATTCTTGCAAAATTGGTGTCACTTGTAGCAAG +
Preference number: 2 (lower is better)
Translates to: FSMKSSSVPTIYTST*ILINSCKIGVTCSK
Trigger: CTTGCTACAAGTGACACCAATTTTGCAAGAATTTATCAGGATCAAGGTAGATGTGTATATCGTTGGAACTGATGATGACTTCATTGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR TCA 72 bp CTGATCTGGAGAGGGCAGTACTCCCAGCAAATCCTCTaGATACTCCACAGACTATGTTACCCAGTCCCAAGG +
Preference number: 3 (lower is better)
Translates to: LIWRGQYSQQIL*ILHRLCYPVPR
Trigger: CCTTGGGACTGGGTAACATAGTCTGTGGAGTATTCAGAGGATTTGCTGGGAGTACTGCCCTCTCCAGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR TCA 72 bp TTTGGAAATTGGGTCCTGAACACGATGGTTAGCAGTTaGAATGCCACACTAGCTGCCAGGCCTAACCCGAGT +
Preference number: 3 (lower is better)
Translates to: FGNWVLNTMVSS*NATLAARPNPS
Trigger: ACTCGGGTTAGGCCTGGCAGCTAGTGTGGCATTTCAACTGCTAACCATCGTGTTCAGGACCCAATTTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR GCA 72 bp GAATCGGAAACGGACCCACGGATATGTGTCTGGAAGTaGCGAAGAAAAGGTAGATTATGGCTGGGAAAAAGG +
Preference number: 3 (lower is better)
Translates to: ESETDPRICVWK*RRKGRLWLGKR
Trigger: CCTTTTTCCCAGCCATAATCTACCTTTTCTTCGGCACTTCCAGACACATATCCGTGGGTCCGTTTCCGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR CCA 72 bp TACTCAGAATCGGAAACGGACCCACGGATATGTGTCTaGAAGTGCCGAAGAAAAGGTAGATTATGGCTGGGA +
Preference number: 3 (lower is better)
Translates to: YSESETDPRICV*KCRRKGRLWLG
Trigger: TCCCAGCCATAATCTACCTTTTCTTCGGCACTTCCAGACACATATCCGTGGGTCCGTTTCCGATTCTGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR TCA 72 bp TGGATAATCGTATTTGAGGGAATAGACGCTGGCAACTaGAAAGGCCACTGCAAATGCAACCATTGCGATGCC +
Preference number: 3 (lower is better)
Translates to: WIIVFEGIDAGN*KGHCKCNHCDA
Trigger: GGCATCGCAATGGTTGCATTTGCAGTGGCCTTTTCAGTTGCCAGCGTCTATTCCCTCAAATACGATTATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR GCA 72 bp CAACTGAAAAGGCCACTGCAAATGCAACCATTGCGATaGCGAAGCAATCTCCTACGGTGTTTTGGAAAGTCT +
Preference number: 3 (lower is better)
Translates to: QLKRPLQMQPLR*RSNLLRCFGKS
Trigger: AGACTTTCCAAAACACCGTAGGAGATTGCTTCGGCATCGCAATGGTTGCATTTGCAGTGGCCTTTTCAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR CAA 90 bp GTTTTCGGATTTTCCTCAAAGCTTTGTTGCGCTTGCGTAGAATTCGAAGTGGACGATCTGGGACTGCTTTaGAAACTGCTCCTGAAACTG +
Preference number: 3 (lower is better)
Translates to: VFGFSSKLCCACVEFEVDDLGLL*KLLLKL
Trigger: CAGTTTCAGGAGCAGTTTCAAAAGCAGTCCCAGATC...GTCCACTTCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR TCA 72 bp TTAACTCCTGATTGCCATCAAGTGGATAATCGTATTTaGGGGAATAGACGCTGGCAACTGAAAAGGCCACTG +
Preference number: 3 (lower is better)
Translates to: LTPDCHQVDNRI*GNRRWQLKRPL
Trigger: CAGTGGCCTTTTCAGTTGCCAGCGTCTATTCCCTCAAATACGATTATCCACTTGATGGCAATCAGGAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR GCA 72 bp CCTGTTTTTAAAGTCACAGCCGTAGGATACACCTGCTaGAATCACGGTCATAATGAATTCGATTGGAATGGG +
Preference number: 3 (lower is better)
Translates to: PVFKVTAVGYTC*NHGHNEFDWNG
Trigger: CCCATTCCAATCGAATTCATTATGACCGTGATTGCAGCAGGTGTATCCTACGGCTGTGACTTTAAAAACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR GCA 72 bp ATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATaGATGAAGGTAGTGACTAGGATGGAAATCTGTCAG +
Preference number: 3 (lower is better)
Translates to: IQNSGATILLNL*MKVVTRMEICQ
Trigger: CTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
3UTR-3UTR CAA 90 bp GAGAATACAGAGTATAGTACTTTGAAAATTGAAACTGGATCAGTGTGTGACGGGCCCAAAGTAGTTGCATaGCGATCTGGGACTGCTTTT +
Preference number: 3 (lower is better)
Translates to: ENTEYSTLKIETGSVCDGPKVVA*RSGTAF
Trigger: AAAAGCAGTCCCAGATCGCAATGCAACTACTTTGGG...CCCGTCACACACTGATCCAGTTTCAATTTTCAAAGTACTATACTCTGTATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR GCA 72 bp TTGTCCTTTCGCCACAATCTGCCTATTTCAGCAAACTaGATCAGCATTCCCTTTAAGTTTCCCAATGCTAAA +
Preference number: 3 (lower is better)
Translates to: LSFRHNLPISAN*ISIPFKFPNAK
Trigger: TTTAGCATTGGGAAACTTAAAGGGAATGCTGATGCAGTTTGCTGAAATAGGCAGATTGTGGCGAAAGGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR GCA 72 bp AAACCTGTTTTTAAAGTCACAGCCGTAGGATACACCTaGTGCAATCACGGTCATAATGAATTCGATTGGAAT +
Preference number: 3 (lower is better)
Translates to: KPVFKVTAVGYT*CNHGHNEFDWN
Trigger: ATTCCAATCGAATTCATTATGACCGTGATTGCAGCAGGTGTATCCTACGGCTGTGACTTTAAAAACAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR CCA 72 bp AATCACGGTCATAATGAATTCGATTGGAATGGGCACTaGAAGTTTGTCTTTGAAGCGCTGATTTATTTCTTT +
Preference number: 3 (lower is better)
Translates to: NHGHNEFDWNGH*KFVFEALIYFF
Trigger: AAAGAAATAAATCAGCGCTTCAAAGACAAACTTCCAGTGCCCATTCCAATCGAATTCATTATGACCGTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR CCA 72 bp CCTAAAGAAACCAATGTTTGCAAAGTAGATAGGAGATaGACATCTGAAAATTTTCACTCCTTCTGGCTCATA +
Preference number: 3 (lower is better)
Translates to: PKETNVCKVDRR*TSENFHSFWLI
Trigger: TATGAGCCAGAAGGAGTGAAAATTTTCAGATGTCCATCTCCTATCTACTTTGCAAACATTGGTTTCTTTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR-3UTR CAA 90 bp GAAACCAATGTTTGCAAAGTAGATAGGAGATGGACATCTGAAAATTTTCACTCCGAAGAATTATTCGAGTaGTTAGGCAATCCCAAAGTA +
Preference number: 3 (lower is better)
Translates to: ETNVCKVDRRWTSENFHSEELFE*LGNPKV
Trigger: TACTTTGGGATTGCCTAACAACTCGAATAATTCTTC...GGAGTGAAAATTTTCAGATGTCCATCTCCTATCTACTTTGCAAACATTGGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR GCA 72 bp AGCATCGATAAGTTTCCGCCTAAAGAAACCAATGTTTaGAAAGTAGATAGGAGATGGACATCTGAAAATTTT +
Preference number: 3 (lower is better)
Translates to: SIDKFPPKETNV*KVDRRWTSENF
Trigger: AAAATTTTCAGATGTCCATCTCCTATCTACTTTGCAAACATTGGTTTCTTTAGGCGGAAACTTATCGATGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp GAAAAGGCCACTGCAAATGCAACCATTGCGATGCCGAAGCAATCTCCTACGGTGAGAAAGCACTGTGACTaGTGCCGCCGCCGCCACCCT +
Preference number: 4 (lower is better)
Translates to: EKATANATIAMPKQSPTVRKHCD*CRRRHP
Trigger: AGGGTGGCGGCGGCGGCATCAGTCACAGTGCTTTCT...CACCGTAGGAGATTGCTTCGGCATCGCAATGGTTGCATTTGCAGTGGCCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp AGCAGCAGCAGTAGTGAAGCCACTGATGAGGGACTCAGACAGGTATATCACTACTTCCAGAAAGCACTGTaGCTGATGCCGCCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: SSSSSEATDEGLRQVYHYFQKAL*LMPPPP
Trigger: TGGCGGCGGCGGCATCAGTCACAGTGCTTTCTGGAA...GTAGTGATATACCTGTCTGAGTCCCTCATCAGTGGCTTCACTACTGCTGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CCA 90 bp TTGCGATGCCGAAGCAATCTCCTACGGTGTTTTGGAAAGTCTCCACGTCAGGTGCCTGAACTGCTGATCTaGAGAGGGCAGTACTCCCAG +
Preference number: 4 (lower is better)
Translates to: LRCRSNLLRCFGKSPRQVPELLI*RGQYSQ
Trigger: CTGGGAGTACTGCCCTCTCCAGATCAGCAGTTCAGG...CACCTGACGTGGAGACTTTCCAAAACACCGTAGGAGATTGCTTCGGCATCGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp TACACCTGCTGCAATCACGGTCATAATGAATTCGATTGGAATGGGCACTGGAAGCCTCCTGTGCTCTCCTaGACTGCTGATCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: YTCCNHGHNEFDWNGHWKPPVLS*TADLER
Trigger: CCTCTCCAGATCAGCAGTTCAGGAGAGCACAGGAGG...CTTCCAGTGCCCATTCCAATCGAATTCATTATGACCGTGATTGCAGCAGGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR CAA 72 bp AACCATTGCGATGCCGAAGCAATCTCCTACGGTGTTTaGGAAAGTCTCCACGTCAGGTGTAATAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: NHCDAEAISYGV*ESLHVRCNRGL
Trigger: CAGCCCCCTATTACACCTGACGTGGAGACTTTCCAAAACACCGTAGGAGATTGCTTCGGCATCGCAATGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp CAAATGCAACCATTGCGATGCCGAAGCAATCTCCTACGGTGTTTTGGAAAGTCTGCTCTCCTGAACTGCTaGTCTGGAGAGGGCAGTACT +
Preference number: 4 (lower is better)
Translates to: QMQPLRCRSNLLRCFGKSALLNC*SGEGST
Trigger: AGTACTGCCCTCTCCAGATCAGCAGTTCAGGAGAGC...AGACTTTCCAAAACACCGTAGGAGATTGCTTCGGCATCGCAATGGTTGCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR GCA 90 bp TTGCGATGCCGAAGCAATCTCCTACGGTGTTTTGGAAAGTCTCCACGTCAGGTGGCCGTAGGATACACCTaGTGCAATCACGGTCATAAT +
Preference number: 4 (lower is better)
Translates to: LRCRSNLLRCFGKSPRQVAVGYT*CNHGHN
Trigger: ATTATGACCGTGATTGCAGCAGGTGTATCCTACGGC...CACCTGACGTGGAGACTTTCCAAAACACCGTAGGAGATTGCTTCGGCATCGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR GCA 90 bp GAAAAGGCCACTGCAAATGCAACCATTGCGATGCCGAAGCAATCTCCTACGGTGTGCAAATGCAACCATTaGGATGCCGAAGCAATCTCC +
Preference number: 4 (lower is better)
Translates to: EKATANATIAMPKQSPTVCKCNH*DAEAIS
Trigger: GGAGATTGCTTCGGCATCGCAATGGTTGCATTTGCA...CACCGTAGGAGATTGCTTCGGCATCGCAATGGTTGCATTTGCAGTGGCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR GCA 90 bp CGCTGGCAACTGAAAAGGCCACTGCAAATGCAACCATTGCGATGCCGAAGCAATAAAGGCCACTGCAAATaGAACCATTGCGATGCCGAA +
Preference number: 4 (lower is better)
Translates to: RWQLKRPLQMQPLRCRSNKGHCK*NHCDAE
Trigger: TTCGGCATCGCAATGGTTGCATTTGCAGTGGCCTTT...ATTGCTTCGGCATCGCAATGGTTGCATTTGCAGTGGCCTTTTCAGTTGCCAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp AAACTGCTAGTCCCACCATCATACTCAGAATCGGAAACGGACCCACGGATATGTCTGACACATACTCTGTaGGGAGCTTCTGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: KLLVPPSYSESETDPRICLTHTL*GASATV
Trigger: CACTGTTGCAGAAGCTCCTCACAGAGTATGTGTCAG...ACATATCCGTGGGTCCGTTTCCGATTCTGAGTATGATGGTGGGACTAGCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGAGAAAGCACTGTGACTaGTGCCGCCGCCGCCACCCT +
Preference number: 4 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMRKHCD*CRRRHP
Trigger: AGGGTGGCGGCGGCGGCATCAGTCACAGTGCTTTCT...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR TCA 90 bp GTGAAGCCACTGATGAGGGACTCAGACAGGTATATCACTACAAATCCAATCCGCATAGACGCTGGCAACTaGAAAGGCCACTGCAAATGC +
Preference number: 4 (lower is better)
Translates to: VKPLMRDSDRYITTNPIRIDAGN*KGHCKC
Trigger: GCATTTGCAGTGGCCTTTTCAGTTGCCAGCGTCTAT...GCGGATTGGATTTGTAGTGATATACCTGTCTGAGTCCCTCATCAGTGGCTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp TTGCGATGCCGAAGCAATCTCCTACGGTGTTTTGGAAAGTCTCCACGTCAGGTGTCCCAGCAAATCCTCTaGATACTCCACAGACTATGT +
Preference number: 4 (lower is better)
Translates to: LRCRSNLLRCFGKSPRQVSQQIL*ILHRLC
Trigger: ACATAGTCTGTGGAGTATTCAGAGGATTTGCTGGGA...CACCTGACGTGGAGACTTTCCAAAACACCGTAGGAGATTGCTTCGGCATCGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR GCA 90 bp GTGAAGCCACTGATGAGGGACTCAGACAGGTATATCACTACAAATCCAATCCGCGTGTTTTGCCTCCTGTaGTCTCCTGAACTGCTGATC +
Preference number: 4 (lower is better)
Translates to: VKPLMRDSDRYITTNPIRVFCLL*SPELLI
Trigger: GATCAGCAGTTCAGGAGAGCACAGGAGGCAAAACAC...GCGGATTGGATTTGTAGTGATATACCTGTCTGAGTCCCTCATCAGTGGCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CCA 90 bp CGCTGGCAACTGAAAAGGCCACTGCAAATGCAACCATTGCGATGCCGAAGCAATGATTGGAATGGGCACTaGAAGTTTGTCTTTGAAGCG +
Preference number: 4 (lower is better)
Translates to: RWQLKRPLQMQPLRCRSNDWNGH*KFVFEA
Trigger: CGCTTCAAAGACAAACTTCCAGTGCCCATTCCAATC...ATTGCTTCGGCATCGCAATGGTTGCATTTGCAGTGGCCTTTTCAGTTGCCAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGTTCCAGAAAGCACTGTaGCTGATGCCGCCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKFQKAL*LMPPPP
Trigger: TGGCGGCGGCGGCATCAGTCACAGTGCTTTCTGGAA...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CCA 90 bp TCTGGGACTGCTTTTGAAACTGCTCCTGAAACTGCTAGTCCCACCATCATACTCTCTCCTACGGTGTTTTaGAAAGTCTCCACGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SGTAFETAPETASPTIILSPTVF*KVSTSG
Trigger: ACCTGACGTGGAGACTTTCCAAAACACCGTAGGAGA...GAGTATGATGGTGGGACTAGCAGTTTCAGGAGCAGTTTCAAAAGCAGTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCCTGAACTGCTGATCTaGAGAGGGCAGTACTCCCAG +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICPELLI*RGQYSQ
Trigger: CTGGGAGTACTGCCCTCTCCAGATCAGCAGTTCAGG...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR TCA 90 bp ATCTCCTACGGTGTTTTGGAAAGTCTCCACGTCAGGTGTAATAGGGGGCTGAAACAGGTTAAAAATGCCTaGCACATACTCTGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ISYGVLESLHVRCNRGLKQVKNA*HILCEE
Trigger: CTCCTCACAGAGTATGTGTCAGGCATTTTTAACCTG...TTTCAGCCCCCTATTACACCTGACGTGGAGACTTTCCAAAACACCGTAGGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp TTAGCCAGCGTGCTGCATTTTGGAAATTGGGTCCTGAACACGATGGTTAGCAGTGTGGATAATCGTATTTaGGGGAATAGACGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: LASVLHFGNWVLNTMVSSVDNRI*GNRRWQ
Trigger: TTGCCAGCGTCTATTCCCTCAAATACGATTATCCAC...ACTGCTAACCATCGTGTTCAGGACCCAATTTCCAAAATGCAGCACGCTGGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGCCTCCTGTGCTCTCCTaGACTGCTGATCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKPPVLS*TADLER
Trigger: CCTCTCCAGATCAGCAGTTCAGGAGAGCACAGGAGG...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR GCA 90 bp GATGTTGGTTCTTCCAATATTAGCCAGCGTGCTGCATTTTGGAAATTGGGTCCTATGCAACCATTGCGATaGCGAAGCAATCTCCTACGG +
Preference number: 4 (lower is better)
Translates to: DVGSSNISQRAAFWKLGPMQPLR*RSNLLR
Trigger: CCGTAGGAGATTGCTTCGGCATCGCAATGGTTGCAT...AGGACCCAATTTCCAAAATGCAGCACGCTGGCTAATATTGGAAGAACCAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CCA 90 bp AAACTGCTAGTCCCACCATCATACTCAGAATCGGAAACGGACCCACGGATATGTTTTAAGCCGGTATGCTaGCAACCAAGATGCTACAAC +
Preference number: 4 (lower is better)
Translates to: KLLVPPSYSESETDPRICFKPVC*QPRCYN
Trigger: GTTGTAGCATCTTGGTTGCCAGCATACCGGCTTAAA...ACATATCCGTGGGTCCGTTTCCGATTCTGAGTATGATGGTGGGACTAGCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCTGACACATACTCTGTaGGGAGCTTCTGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICLTHTL*GASATV
Trigger: CACTGTTGCAGAAGCTCCTCACAGAGTATGTGTCAG...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR TCA 90 bp GCAAATGCTAAACCTTGTAGTACGGCCACAATCCCTGTGCTGATACCAGAAACACCACAATCCCTGTGCTaGTACCAGAAACAATATCAC +
Preference number: 4 (lower is better)
Translates to: ANAKPCSTATIPVLIPETPQSLC*YQKQYH
Trigger: GTGATATTGTTTCTGGTATCAGCACAGGGATTGTGG...TGTTTCTGGTATCAGCACAGGGATTGTGGCCGTACTACAAGGTTTAGCATTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp TTAGCCAGCGTGCTGCATTTTGGAAATTGGGTCCTGAACACGATGGTTAGCAGTGACGGGACTGTCAACTaGAAAATGAATTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LASVLHFGNWVLNTMVSSDGTVN*KMNLSW
Trigger: CCAACTCAAATTCATTTTTCAGTTGACAGTCCCGTC...ACTGCTAACCATCGTGTTCAGGACCCAATTTCCAAAATGCAGCACGCTGGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp GATGTTGGTTCTTCCAATATTAGCCAGCGTGCTGCATTTTGGAAATTGGGTCCTAACTGGATCAGTGTGTaGCGGGACTGTCAACTGAAA +
Preference number: 4 (lower is better)
Translates to: DVGSSNISQRAAFWKLGPNWISV*RDCQLK
Trigger: TTTCAGTTGACAGTCCCGTCACACACTGATCCAGTT...AGGACCCAATTTCCAAAATGCAGCACGCTGGCTAATATTGGAAGAACCAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGGCTCTCCTGAACTGCTaGTCTGGAGAGGGCAGTACT +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKALLNC*SGEGST
Trigger: AGTACTGCCCTCTCCAGATCAGCAGTTCAGGAGAGC...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR TCA 90 bp TTCTGCAGTTTTCGGATTTTCCTCAAAGCTTTGTTGCGCTTGCGTAGAATTCGAACGATGGTTAGCAGTTaGAATGCCACACTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: FCSFRIFLKALLRLRRIRTMVSS*NATLAA
Trigger: GGCAGCTAGTGTGGCATTTCAACTGCTAACCATCGT...TCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp AGCAGCAGCAGTAGTGAAGCCACTGATGAGGGACTCAGACAGGTATATCACTACTGCTACAACACACTTTaGGATGATCCAGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: SSSSSEATDEGLRQVYHYCYNTL*DDPEMS
Trigger: AGACATTTCTGGATCATCTCAAAGTGTGTTGTAGCA...GTAGTGATATACCTGTCTGAGTCCCTCATCAGTGGCTTCACTACTGCTGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR GCA 90 bp AGCAGCAGCAGTAGTGAAGCCACTGATGAGGGACTCAGACAGGTATATCACTACAGCTGTCACCAGGTCTaGAATATTAGTCTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: SSSSSEATDEGLRQVYHYSCHQV*NISLLY
Trigger: ATAGAGAAGACTAATATTGCAGACCTGGTGACAGCT...GTAGTGATATACCTGTCTGAGTCCCTCATCAGTGGCTTCACTACTGCTGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR GCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTGTGTTTTGCCTCCTGTaGTCTCCTGAACTGCTGATC +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICVFCLL*SPELLI
Trigger: GATCAGCAGTTCAGGAGAGCACAGGAGGCAAAACAC...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CCA 90 bp GATGTTGGTTCTTCCAATATTAGCCAGCGTGCTGCATTTTGGAAATTGGGTCCTCCACGGATATGTGTCTaGAAGTGCCGAAGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: DVGSSNISQRAAFWKLGPPRICV*KCRRKG
Trigger: ACCTTTTCTTCGGCACTTCCAGACACATATCCGTGG...AGGACCCAATTTCCAAAATGCAGCACGCTGGCTAATATTGGAAGAACCAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTTCAAGAATGAGGCTGTaGAGGCTGATTTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICSRMRL*RLILGT
Trigger: GGTCCCCAAAATCAGCCTCCACAGCCTCATTCTTGA...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR TCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTTGGGGACCTCAATGTTaGGAGGAAGATCATCATTCC +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICWGPQC*EEDHHS
Trigger: GGAATGATGATCTTCCTCTCAACATTGAGGTCCCCA...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR TCA 90 bp GATGCCGAAGCAATCTCCTACGGTGTTTTGGAAAGTCTCCACGTCAGGTGTAATGACCTGTATAAATTATaGGATTCAAAACAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: DAEAISYGVLESLHVRCNDLYKL*DSKQWR
Trigger: GCGCCACTGTTTTGAATCTCATAATTTATACAGGTC...ATTACACCTGACGTGGAGACTTTCCAAAACACCGTAGGAGATTGCTTCGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR GCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTTGCTGGCAACCAAGATaGTATGGGGAACAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICCWQPR*YGEQRE
Trigger: CTCTCTTTGTTCCCCATAGCATCTTGGTTGCCAGCA...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR GCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTGGCTGGGAAAAAGGATaGATACAACCCATAGACTGG +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICGWEKG*IQPIDW
Trigger: CCAGTCTATGGGTTGTATGCATCCTTTTTCCCAGCC...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR GCA 90 bp AGTGAAGCCACTGATGAGGGACTCAGACAGGTATATCACTACAAATCCAATCCGACTTGTAGCAAGCCTTaGTTCTGCAGTTTTCGGATT +
Preference number: 4 (lower is better)
Translates to: SEATDEGLRQVYHYKSNPTCSKP*FCSFRI
Trigger: AATCCGAAAACTGCAGAAGCAAGGCTTGCTACAAGT...CGGATTGGATTTGTAGTGATATACCTGTCTGAGTCCCTCATCAGTGGCTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTTTTAAGCCGGTATGCTaGCAACCAAGATGCTATGGG +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICFKPVC*QPRCYG
Trigger: CCCATAGCATCTTGGTTGCCAGCATACCGGCTTAAA...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR CCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTTCTCCTACGGTGTTTTaGAAAGTCTCCACGTCAGGT +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICSPTVF*KVSTSG
Trigger: ACCTGACGTGGAGACTTTCCAAAACACCGTAGGAGA...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CCA 90 bp TTCTGCAGTTTTCGGATTTTCCTCAAAGCTTTGTTGCGCTTGCGTAGAATTCGACAGCGTGCTGCATTTTaGAAATTGGGTCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: FCSFRIFLKALLRLRRIRQRAAF*KLGPEH
Trigger: GTGTTCAGGACCCAATTTCCAAAATGCAGCACGCTG...TCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR CAA 72 bp TGCAGTTTTCGGATTTTCCTCAAAGCTTTGTTGCGCTaGCGTAGAATTCGAAGTGGACTAAAGCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: CSFRIFLKALLR*RRIRSGLKPTA
Trigger: TGCTGTTGGCTTTAGTCCACTTCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR CAA 72 bp CCTTGCTTCTGCAGTTTTCGGATTTTCCTCAAAGCTTaGTTGCGCTTGCGTAGAATTCGAAGTGGACTAAAG +
Preference number: 4 (lower is better)
Translates to: PCFCSFRIFLKA*LRLRRIRSGLK
Trigger: CTTTAGTCCACTTCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCAGAAGCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTTTGGCTGTGGCAAGTTaGAGACCTTTGCAACTATGT +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICLAVAS*RPLQLC
Trigger: ACATAGTTGCAAAGGTCTTCAACTTGCCACAGCCAA...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR TCA 90 bp TGCAGTTTTCGGATTTTCCTCAAAGCTTTGTTGCGCTTGCGTAGAATTCGAAGTTTGGCTGTGGCAAGTTaGAGACCTTTGCAACTATGT +
Preference number: 4 (lower is better)
Translates to: CSFRIFLKALLRLRRIRSLAVAS*RPLQLC
Trigger: ACATAGTTGCAAAGGTCTTCAACTTGCCACAGCCAA...ACTTCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGATAGACGCTGGCAACTaGAAAGGCCACTGCAAATGC +
Preference number: 4 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMIDAGN*KGHCKC
Trigger: GCATTTGCAGTGGCCTTTTCAGTTGCCAGCGTCTAT...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR TCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTTCCCAGCAAATCCTCTaGATACTCCACAGACTATGT +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICSQQIL*ILHRLC
Trigger: ACATAGTCTGTGGAGTATTCAGAGGATTTGCTGGGA...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR TCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGACGATGGTTAGCAGTTaGAATGCCACACTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKTMVSS*NATLAA
Trigger: GGCAGCTAGTGTGGCATTTCAACTGCTAACCATCGT...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR TCA 90 bp TTCTGCAGTTTTCGGATTTTCCTCAAAGCTTTGTTGCGCTTGCGTAGAATTCGATTGGAAATTGGGTCCTaGACACGATGGTTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: FCSFRIFLKALLRLRRIRLEIGS*TRWLAV
Trigger: AACTGCTAACCATCGTGTTCAGGACCCAATTTCCAA...TCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTTCCAGTACTTCTATCTaGTTGTTGTCCAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICSSTSI*LLSSSS
Trigger: CGAAGAGCTGGACAACAATCAGATAGAAGTACTGGA...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR TCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGGCAGGTCTGTGGTATTaGTTGGCTGGTCCAGTACTT +
Preference number: 4 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMAGLWY*LAGPVL
Trigger: AAGTACTGGACCAGCCAATCAATACCACAGACCTGC...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR GCA 90 bp GATGTTGGTTCTTCCAATATTAGCCAGCGTGCTGCATTTTGGAAATTGGGTCCTGTAGGATACACCTGCTaGAATCACGGTCATAATGAA +
Preference number: 4 (lower is better)
Translates to: DVGSSNISQRAAFWKLGPVGYTC*NHGHNE
Trigger: TTCATTATGACCGTGATTGCAGCAGGTGTATCCTAC...AGGACCCAATTTCCAAAATGCAGCACGCTGGCTAATATTGGAAGAACCAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR GCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGATGCAACCATTGCGATaGCGAAGCAATCTCCTACGG +
Preference number: 4 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMMQPLR*RSNLLR
Trigger: CCGTAGGAGATTGCTTCGGCATCGCAATGGTTGCAT...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR GCA 90 bp AAACTGCTAGTCCCACCATCATACTCAGAATCGGAAACGGACCCACGGATATGTCTATTAACTCCTGATTaGCATCAAGTGGATAATCGT +
Preference number: 4 (lower is better)
Translates to: KLLVPPSYSESETDPRICLLTPD*HQVDNR
Trigger: ACGATTATCCACTTGATGGCAATCAGGAGTTAATAG...ACATATCCGTGGGTCCGTTTCCGATTCTGAGTATGATGGTGGGACTAGCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR GCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCCTTTCGCCACAATCTaGCTATTTCAGCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICPFATI*LFQQTA
Trigger: TGCAGTTTGCTGAAATAGGCAGATTGTGGCGAAAGG...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR GCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTAAGCTTTGTTGCGCTTaGGTAGAATTCGAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICKLCCA*VEFEVD
Trigger: GTCCACTTCGAATTCTACGCAAGCGCAACAAAGCTT...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGATACAACCCATAGACTaGGGGAATGTCGACCAGCAG +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKIQPID*GNVDQQ
Trigger: CTGCTGGTCGACATTCCCCCAGTCTATGGGTTGTAT...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CCA 90 bp GAGAATACAGAGTATAGTACTTTGAAAATTGAAACTGGATCAGTGTGTGACGGGATACAACCCATAGACTaGGGGAATGTCGACCAGCAG +
Preference number: 4 (lower is better)
Translates to: ENTEYSTLKIETGSVCDGIQPID*GNVDQQ
Trigger: CTGCTGGTCGACATTCCCCCAGTCTATGGGTTGTAT...CCCGTCACACACTGATCCAGTTTCAATTTTCAAAGTACTATACTCTGTATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CCA 90 bp TCTGGGACTGCTTTTGAAACTGCTCCTGAAACTGCTAGTCCCACCATCATACTCCATAATGAATTCGATTaGAATGGGCACTGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: SGTAFETAPETASPTIILHNEFD*NGHWKF
Trigger: AAACTTCCAGTGCCCATTCCAATCGAATTCATTATG...GAGTATGATGGTGGGACTAGCAGTTTCAGGAGCAGTTTCAAAAGCAGTCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CCA 90 bp TGCAGTTTTCGGATTTTCCTCAAAGCTTTGTTGCGCTTGCGTAGAATTCGAAGTCCAGGAGAAATCCAATaGCTAGAACGACAATCAGCA +
Preference number: 4 (lower is better)
Translates to: CSFRIFLKALLRLRRIRSPGEIQ*LERQSA
Trigger: TGCTGATTGTCGTTCTAGCCATTGGATTTCTCCTGG...ACTTCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CCA 90 bp CAAGCCTTGCTTCTGCAGTTTTCGGATTTTCCTCAAAGCTTTGTTGCGCTTGCGGAATTTTGTTTCAACTaGCACCTCATATACCCGATT +
Preference number: 4 (lower is better)
Translates to: QALLLQFSDFPQSFVALAEFCFN*HLIYPI
Trigger: AATCGGGTATATGAGGTGCCAGTTGAAACAAAATTC...CGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCAGAAGCAAGGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR CAA 72 bp TTATTCGAGTTGTTAGGCAATCCCAAAGTAGTTGCATaGCGATCTGGGACTGCTTTTGAAACTGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LFELLGNPKVVA*RSGTAFETAPE
Trigger: TTCAGGAGCAGTTTCAAAAGCAGTCCCAGATCGCAATGCAACTACTTTGGGATTGCCTAACAACTCGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
3UTR CAA 72 bp ACCCTCTCGTCATCCAGTAGTGAAGAATTATTCGAGTaGTTAGGCAATCCCAAAGTAGTTGCATTGCGATCT +
Preference number: 4 (lower is better)
Translates to: TLSSSSSEELFE*LGNPKVVALRS
Trigger: AGATCGCAATGCAACTACTTTGGGATTGCCTAACAACTCGAATAATTCTTCACTACTGGATGACGAGAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR TCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTGACGGGACTGTCAACTaGAAAATGAATTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICDGTVN*KMNLSW
Trigger: CCAACTCAAATTCATTTTTCAGTTGACAGTCCCGTC...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR TCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGAACTGGATCAGTGTGTaGCGGGACTGTCAACTGAAA +
Preference number: 4 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMNWISV*RDCQLK
Trigger: TTTCAGTTGACAGTCCCGTCACACACTGATCCAGTT...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR TCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTTTTAAGGCCCCTCACTaGAGAAACATCAAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICFKAPH*RNIKKG
Trigger: TCCTTTCTTGATGTTTCTTCAGTGAGGGGCCTTAAA...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR GCA 90 bp TGCAGTTTTCGGATTTTCCTCAAAGCTTTGTTGCGCTTGCGTAGAATTCGAAGTTCTGTGAGGAGCTTCTaGAACAGTGGTACATTTTCA +
Preference number: 4 (lower is better)
Translates to: CSFRIFLKALLRLRRIRSSVRSF*NSGTFS
Trigger: TGAAAATGTACCACTGTTGCAGAAGCTCCTCACAGA...ACTTCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR GCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGCAATCCCAAAGTAGTTaGATTGCGATCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKQSQSS*IAIWDC
Trigger: GCAGTCCCAGATCGCAATGCAACTACTTTGGGATTG...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR GCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTGTAGGATACACCTGCTaGAATCACGGTCATAATGAA +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICVGYTC*NHGHNE
Trigger: TTCATTATGACCGTGATTGCAGCAGGTGTATCCTAC...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR GCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGGCCGTAGGATACACCTaGTGCAATCACGGTCATAAT +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKAVGYT*CNHGHN
Trigger: ATTATGACCGTGATTGCAGCAGGTGTATCCTACGGC...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR GCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGTGCAAATGCAACCATTaGGATGCCGAAGCAATCTCC +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKCKCNH*DAEAIS
Trigger: GGAGATTGCTTCGGCATCGCAATGGTTGCATTTGCA...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR GCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGAAAGGCCACTGCAAATaGAACCATTGCGATGCCGAA +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKKGHCK*NHCDAE
Trigger: TTCGGCATCGCAATGGTTGCATTTGCAGTGGCCTTT...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR GCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGCAGCAATCTGTGTTTTaGCTCCTGTGCTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMQQSVF*LLCSPE
Trigger: TTCAGGAGAGCACAGGAGGCAAAACACAGATTGCTG...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR GCA 90 bp GAGAATACAGAGTATAGTACTTTGAAAATTGAAACTGGATCAGTGTGTGACGGGCAGCAATCTGTGTTTTaGCTCCTGTGCTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: ENTEYSTLKIETGSVCDGQQSVF*LLCSPE
Trigger: TTCAGGAGAGCACAGGAGGCAAAACACAGATTGCTG...CCCGTCACACACTGATCCAGTTTCAATTTTCAAAGTACTATACTCTGTATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR GCA 90 bp ATAGATGTTGGTTCTTCCAATATTAGCCAGCGTGCTGCATTTTGGAAATTGGGTAAGCTTTGTTGCGCTTaGGTAGAATTCGAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: IDVGSSNISQRAAFWKLGKLCCA*VEFEVD
Trigger: GTCCACTTCGAATTCTACGCAAGCGCAACAAAGCTT...ACCCAATTTCCAAAATGCAGCACGCTGGCTAATATTGGAAGAACCAACATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR GCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTACTTGTAGCAAGCCTTaGTTCTGCAGTTTTCGGATT +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICTCSKP*FCSFRI
Trigger: AATCCGAAAACTGCAGAAGCAAGGCTTGCTACAAGT...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR GCA 90 bp ATAGATGTTGGTTCTTCCAATATTAGCCAGCGTGCTGCATTTTGGAAATTGGGTTTCTTTAAGCCGGTATaGTGGCAACCAAGATGCTAC +
Preference number: 4 (lower is better)
Translates to: IDVGSSNISQRAAFWKLGFFKPV*WQPRCY
Trigger: GTAGCATCTTGGTTGCCAGCATACCGGCTTAAAGAA...ACCCAATTTCCAAAATGCAGCACGCTGGCTAATATTGGAAGAACCAACATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGTCTCTTGGCCTTTTGTaGGGAACAGCTACAACACAC +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKSLGLL*GTATTH
Trigger: GTGTGTTGTAGCTGTTCCCCACAAAAGGCCAAGAGA...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR CCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGAGAGGACAATTCTCTTaGCCTTTTGTGGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMRGQFS*PFVGNS
Trigger: GCTGTTCCCCACAAAAGGCCAAGAGAATTGTCCTCT...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR CCA 90 bp CAAATGCAACCATTGCGATGCCGAAGCAATCTCCTACGGTGTTTTGGAAAGTCTAAGGTAGATTATGGCTaGGAAAAAGGATGCATACAA +
Preference number: 4 (lower is better)
Translates to: QMQPLRCRSNLLRCFGKSKVDYG*EKGCIQ
Trigger: TTGTATGCATCCTTTTTCCCAGCCATAATCTACCTT...AGACTTTCCAAAACACCGTAGGAGATTGCTTCGGCATCGCAATGGTTGCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGCCACGGATATGTGTCTaGAAGTGCCGAAGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMPRICV*KCRRKG
Trigger: ACCTTTTCTTCGGCACTTCCAGACACATATCCGTGG...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGCAGCGTGCTGCATTTTaGAAATTGGGTCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKQRAAF*KLGPEH
Trigger: GTGTTCAGGACCCAATTTCCAAAATGCAGCACGCTG...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTGTCTGTGGTATTGATTaGCTGGTCCAGTACTTCTAT +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICVCGID*LVQYFY
Trigger: ATAGAAGTACTGGACCAGCCAATCAATACCACAGAC...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR TCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGCAGGTTAAAAATGCCTaGCACATACTCTGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKQVKNA*HILCEE
Trigger: CTCCTCACAGAGTATGTGTCAGGCATTTTTAACCTG...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR TCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGCTGGCCACAATATACTaGTTCCCAAAGGGTTCAATC +
Preference number: 4 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMLATIY*FPKGSI
Trigger: GATTGAACCCTTTGGGAATCAGTATATTGTGGCCAG...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR TCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGCCACAATCCCTGTGCTaGTACCAGAAACAATATCAC +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKPQSLC*YQKQYH
Trigger: GTGATATTGTTTCTGGTATCAGCACAGGGATTGTGG...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR TCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGGTGGATAATCGTATTTaGGGGAATAGACGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKVDNRI*GNRRWQ
Trigger: TTGCCAGCGTCTATTCCCTCAAATACGATTATCCAC...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR TCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGTTGGAAATTGGGTCCTaGACACGATGGTTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKLEIGS*TRWLAV
Trigger: AACTGCTAACCATCGTGTTCAGGACCCAATTTCCAA...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR GCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTAGCTGTCACCAGGTCTaGAATATTAGTCTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICSCHQV*NISLLY
Trigger: ATAGAGAAGACTAATATTGCAGACCTGGTGACAGCT...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR GCA 90 bp CTCAATGAAGTCATCATCAGTTCCAACGATATACACATCTACCTTGATCCTGATCCTTTCGCCACAATCTaGCTATTTCAGCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: LNEVIISSNDIHIYLDPDPFATI*LFQQTA
Trigger: TGCAGTTTGCTGAAATAGGCAGATTGTGGCGAAAGG...ATCAGGATCAAGGTAGATGTGTATATCGTTGGAACTGATGATGACTTCATTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR GCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTATACTGCTAAACCTATaGATGAAGGTAGTGACTAGG +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICILLNL*MKVVTR
Trigger: CCTAGTCACTACCTTCATGCATAGGTTTAGCAGTAT...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTATTTGTAGAATACACTaGCCTGGCCACAATATACTG +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICICRIH*PGHNIL
Trigger: CAGTATATTGTGGCCAGGCCAGTGTATTCTACAAAT...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CCA 90 bp TTCTGCAGTTTTCGGATTTTCCTCAAAGCTTTGTTGCGCTTGCGTAGAATTCGAATTTGTAGAATACACTaGCCTGGCCACAATATACTG +
Preference number: 4 (lower is better)
Translates to: FCSFRIFLKALLRLRRIRICRIH*PGHNIL
Trigger: CAGTATATTGTGGCCAGGCCAGTGTATTCTACAAAT...TCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAATCCGAAAACTGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGGATTGGAATGGGCACTaGAAGTTTGTCTTTGAAGCG +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKDWNGH*KFVFEA
Trigger: CGCTTCAAAGACAAACTTCCAGTGCCCATTCCAATC...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGCCAGGAGAAATCCAATaGCTAGAACGACAATCAGCA +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKPGEIQ*LERQSA
Trigger: TGCTGATTGTCGTTCTAGCCATTGGATTTCTCCTGG...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGTCATTCCAGTCAATGTaGAAAGGCAGGTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMSFQSM*KGRSVV
Trigger: TACCACAGACCTGCCTTTCCACATTGACTGGAATGA...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR TCA 90 bp GAAACCAATGTTTGCAAAGTAGATAGGAGATGGACATCTGAAAATTTTCACTCCCTGGCCACAATATACTaGTTCCCAAAGGGTTCAATC +
Preference number: 4 (lower is better)
Translates to: ETNVCKVDRRWTSENFHSLATIY*FPKGSI
Trigger: GATTGAACCCTTTGGGAATCAGTATATTGTGGCCAG...GGAGTGAAAATTTTCAGATGTCCATCTCCTATCTACTTTGCAAACATTGGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR GCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGTCTGTGAGGAGCTTCTaGAACAGTGGTACATTTTCA +
Preference number: 4 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMSVRSF*NSGTFS
Trigger: TGAAAATGTACCACTGTTGCAGAAGCTCCTCACAGA...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR GCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGTTCTTTAAGCCGGTATaGTGGCAACCAAGATGCTAT +
Preference number: 4 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMFFKPV*WQPRCY
Trigger: ATAGCATCTTGGTTGCCAGCATACCGGCTTAAAGAA...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR GCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCTATTAACTCCTGATTaGCATCAAGTGGATAATCGT +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICLLTPD*HQVDNR
Trigger: ACGATTATCCACTTGATGGCAATCAGGAGTTAATAG...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGTTTTTCTGTTGGCTGTaGCAAGTTGAAGACCTTTGC +
Preference number: 4 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMFFCWL*QVEDLC
Trigger: GCAAAGGTCTTCAACTTGCCACAGCCAACAGAAAAA...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CCA 90 bp GAGAATACAGAGTATAGTACTTTGAAAATTGAAACTGGATCAGTGTGTGACGGGTTTTTCTGTTGGCTGTaGCAAGTTGAAGACCTTTGC +
Preference number: 4 (lower is better)
Translates to: ENTEYSTLKIETGSVCDGFFCWL*QVEDLC
Trigger: GCAAAGGTCTTCAACTTGCCACAGCCAACAGAAAAA...CCCGTCACACACTGATCCAGTTTCAATTTTCAAAGTACTATACTCTGTATTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGCTGCATTTTGGAAATTaGGTCCTGAACACGATGGTT +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKLHFGN*VLNTMV
Trigger: AACCATCGTGTTCAGGACCCAATTTCCAAAATGCAG...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR TCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGTTTGCAACTATGTGGTaGACACTTCTTCTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMFATMW*TLLLAF
Trigger: AAAGGCAAGAAGAAGTGTTCACCACATAGTTGCAAA...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR TCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGAGCTACAACACACTTTaGGATGATCCAGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMSYNTL*DDPEMS
Trigger: AGACATTTCTGGATCATCTCAAAGTGTGTTGTAGCT...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR GCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGCCTATTTCAGCAAACTaGATCAGCATTCCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKPISAN*ISIPFK
Trigger: CTTAAAGGGAATGCTGATGCAGTTTGCTGAAATAGG...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR GCA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTATCCTGATAAATTCTTaGAAAATCGATTTAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ATILLNLCMKVVTRMEICILINS*KIDLRP
Trigger: GGGCCTTAAATCGATTTTGCAAGAATTTATCAGGAT...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR GCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGATACTGCTAAACCTATaGATGAAGGTAGTGACTAGG +
Preference number: 4 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMILLNL*MKVVTR
Trigger: CCTAGTCACTACCTTCATGCATAGGTTTAGCAGTAT...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CCA 90 bp GAAACCAATGTTTGCAAAGTAGATAGGAGATGGACATCTGAAAATTTTCACTCCCTGCATTTTGGAAATTaGGTCCTGAACACGATGGTT +
Preference number: 4 (lower is better)
Translates to: ETNVCKVDRRWTSENFHSLHFGN*VLNTMV
Trigger: AACCATCGTGTTCAGGACCCAATTTCCAAAATGCAG...GGAGTGAAAATTTTCAGATGTCCATCTCCTATCTACTTTGCAAACATTGGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR GCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGATATGTGTCTGGAAGTaGCGAAGAAAAGGTAGATTA +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKICVWK*RRKGRL
Trigger: TAATCTACCTTTTCTTCGGCACTTCCAGACACATAT...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR GCA 90 bp GTCATCATCAGTTCCAACGATATACACATCTACCTTGATCCTGATAAATTCTTGCCTATTTCAGCAAACTaGATCAGCATTCCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: VIISSNDIHIYLDPDKFLPISAN*ISIPFK
Trigger: CTTAAAGGGAATGCTGATGCAGTTTGCTGAAATAGG...CAAGAATTTATCAGGATCAAGGTAGATGTGTATATCGTTGGAACTGATGATGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CCA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGAAGGTAGATTATGGCTaGGAAAAAGGATGCATACAA +
Preference number: 4 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMKVDYG*EKGCIQ
Trigger: TTGTATGCATCCTTTTTCCCAGCCATAATCTACCTT...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGCATAATGAATTCGATTaGAATGGGCACTGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKHNEFD*NGHWKF
Trigger: AAACTTCCAGTGCCCATTCCAATCGAATTCATTATG...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CCA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGGAATTTTGTTTCAACTaGCACCTCATATACCCGATT +
Preference number: 4 (lower is better)
Translates to: NYEIQNSGATILLNLCMKEFCFN*HLIYPI
Trigger: AATCGGGTATATGAGGTGCCAGTTGAAACAAAATTC...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR GCA 90 bp GTCATCATCAGTTCCAACGATATACACATCTACCTTGATCCTGATAAATTCTTGATATGTGTCTGGAAGTaGCGAAGAAAAGGTAGATTA +
Preference number: 4 (lower is better)
Translates to: VIISSNDIHIYLDPDKFLICVWK*RRKGRL
Trigger: TAATCTACCTTTTCTTCGGCACTTCCAGACACATAT...CAAGAATTTATCAGGATCAAGGTAGATGTGTATATCGTTGGAACTGATGATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CAA 90 bp TTAGCCAGCGTGCTGCATTTTGGAAATTGGGTCCTGAACACGATGGTTAGCAGTCCCAAAGTAGTTGCATaGCGATCTGGGACTGCTTTT +
Preference number: 5 (lower is better)
Translates to: LASVLHFGNWVLNTMVSSPKVVA*RSGTAF
Trigger: AAAAGCAGTCCCAGATCGCAATGCAACTACTTTGGG...ACTGCTAACCATCGTGTTCAGGACCCAATTTCCAAAATGCAGCACGCTGGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CAA 90 bp GTGAAGCCACTGATGAGGGACTCAGACAGGTATATCACTACAAATCCAATCCGCGCTGCATTTTGGAAATaGGGTCCTGAACACGATGGT +
Preference number: 5 (lower is better)
Translates to: VKPLMRDSDRYITTNPIRAAFWK*GPEHDG
Trigger: ACCATCGTGTTCAGGACCCAATTTCCAAAATGCAGC...GCGGATTGGATTTGTAGTGATATACCTGTCTGAGTCCCTCATCAGTGGCTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CAA 90 bp AGCAGCAGCAGTAGTGAAGCCACTGATGAGGGACTCAGACAGGTATATCACTACAAAGCTTTGTTGCGCTaGCGTAGAATTCGAAGTGGA +
Preference number: 5 (lower is better)
Translates to: SSSSSEATDEGLRQVYHYKALLR*RRIRSG
Trigger: TCCACTTCGAATTCTACGCAAGCGCAACAAAGCTTT...GTAGTGATATACCTGTCTGAGTCCCTCATCAGTGGCTTCACTACTGCTGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS GCA 90 bp ATCACTGAGCAACCATTCTTTAAGCCGGTATGCTGGCAACCAAGATaGTATGGGGAACAAAGAGAGGACAATTCTCTTGGCCTTTTGTGG +
Preference number: 5 (lower is better)
Translates to: ITEQPFFKPVCWQPR*YGEQREDNSLGLLW
Trigger: CCACAAAAGGCCAAGAGAATTGTCCTCTCTTTGTTCCCCATAGCATCTTGGTTGCCAGCATACCGGCTTAAAGAATGGTTGCTCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000453332.1
CDS CCA 90 bp TTGGGGACCTCAATGTTGAGAGGAAGATCATCATTCCAGTCAATGTaGAAAGGCAGGTCTGTGGTATTGATTGGCTGGTCCAGTACTTCT +
Preference number: 5 (lower is better)
Translates to: LGTSMLRGRSSFQSM*KGRSVVLIGWSSTS
Trigger: AGAAGTACTGGACCAGCCAATCAATACCACAGACCTGCCTTTCCACATTGACTGGAATGATGATCTTCCTCTCAACATTGAGGTCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS CCA 90 bp ATCATCATTCCAGTCAATGTGGAAAGGCAGGTCTGTGGTATTGATTaGCTGGTCCAGTACTTCTATCTGATTGTTGTCCAGCTCTTCGTC +
Preference number: 5 (lower is better)
Translates to: IIIPVNVERQVCGID*LVQYFYLIVVQLFV
Trigger: GACGAAGAGCTGGACAACAATCAGATAGAAGTACTGGACCAGCCAATCAATACCACAGACCTGCCTTTCCACATTGACTGGAATGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR CAA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCTGCAAATGCAACCATaGCGATGCCGAAGCAATCTC +
Preference number: 5 (lower is better)
Translates to: ATILLNLCMKVVTRMEICLQMQP*RCRSNL
Trigger: GAGATTGCTTCGGCATCGCAATGGTTGCATTTGCAG...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CAA 90 bp CAAATGCAACCATTGCGATGCCGAAGCAATCTCCTACGGTGTTTTGGAAAGTCTTTCCTCAAAGCTTTGTaGCGCTTGCGTAGAATTCGA +
Preference number: 5 (lower is better)
Translates to: QMQPLRCRSNLLRCFGKSFLKAL*RLRRIR
Trigger: TCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAA...AGACTTTCCAAAACACCGTAGGAGATTGCTTCGGCATCGCAATGGTTGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS TCA 90 bp GAAGATCATCATTCCAGTCAATGTGGAAAGGCAGGTCTGTGGTATTaGTTGGCTGGTCCAGTACTTCTATCTGATTGTTGTCCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: EDHHSSQCGKAGLWY*LAGPVLLSDCCPAL
Trigger: AAGAGCTGGACAACAATCAGATAGAAGTACTGGACCAGCCAATCAATACCACAGACCTGCCTTTCCACATTGACTGGAATGATGATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR CAA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCCCAAAGTAGTTGCATaGCGATCTGGGACTGCTTTT +
Preference number: 5 (lower is better)
Translates to: ATILLNLCMKVVTRMEICPKVVA*RSGTAF
Trigger: AAAAGCAGTCCCAGATCGCAATGCAACTACTTTGGG...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CAA 90 bp TTAAGTTTCCCAATGCTAAAGCTGCCAGGACGGACTTTTGTAGAGGCGCCAGGAGAAGAATTATTCGAGTaGTTAGGCAATCCCAAAGTA +
Preference number: 5 (lower is better)
Translates to: LSFPMLKLPGRTFVEAPGEELFE*LGNPKV
Trigger: TACTTTGGGATTGCCTAACAACTCGAATAATTCTTC...TCCTGGCGCCTCTACAAAAGTCCGTCCTGGCAGCTTTAGCATTGGGAAACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CAA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGGGCAGGTCTGTGGTATaGATTGGCTGGTCCAGTACT +
Preference number: 5 (lower is better)
Translates to: NYEIQNSGATILLNLCMKGRSVV*IGWSST
Trigger: AGTACTGGACCAGCCAATCAATACCACAGACCTGCC...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS TCA 90 bp AAAGGCAGGTCTGTGGTATTGATTGGCTGGTCCAGTACTTCTATCTaGTTGTTGTCCAGCTCTTCGTCAGAATCTTTTATGGTGTCAACA +
Preference number: 5 (lower is better)
Translates to: KGRSVVLIGWSSTSI*LLSSSSSESFMVST
Trigger: TGTTGACACCATAAAAGATTCTGACGAAGAGCTGGACAACAATCAGATAGAAGTACTGGACCAGCCAATCAATACCACAGACCTGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR CAA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGGAGAGGACAATTCTCTaGGCCTTTTGTGGGGAACAG +
Preference number: 5 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMERTIL*AFCGEQ
Trigger: CTGTTCCCCACAAAAGGCCAAGAGAATTGTCCTCTC...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR CAA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGATCTCCTACGGTGTTTaGGAAAGTCTCCACGTCAGG +
Preference number: 5 (lower is better)
Translates to: NYEIQNSGATILLNLCMKISYGV*ESLHVR
Trigger: CCTGACGTGGAGACTTTCCAAAACACCGTAGGAGAT...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CAA 90 bp AGAATTTTGTTTCAACTGGCACCTCATATACCCGATTACGTAATCCTCCATTTGATCTCCTACGGTGTTTaGGAAAGTCTCCACGTCAGG +
Preference number: 5 (lower is better)
Translates to: RILFQLAPHIPDYVILHLISYGV*ESLHVR
Trigger: CCTGACGTGGAGACTTTCCAAAACACCGTAGGAGAT...CAAATGGAGGATTACGTAATCGGGTATATGAGGTGCCAGTTGAAACAAAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CAA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGCTGCAAATGCAACCATaGCGATGCCGAAGCAATCTC +
Preference number: 5 (lower is better)
Translates to: NYEIQNSGATILLNLCMKLQMQP*RCRSNL
Trigger: GAGATTGCTTCGGCATCGCAATGGTTGCATTTGCAG...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CAA 90 bp GCCACTATACTGCTAAACCTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTTTCCTCAAAGCTTTGTaGCGCTTGCGTAGAATTCGA +
Preference number: 5 (lower is better)
Translates to: ATILLNLCMKVVTRMEICFLKAL*RLRRIR
Trigger: TCGAATTCTACGCAAGCGCAACAAAGCTTTGAGGAA...ACAGATTTCCATCCTAGTCACTACCTTCATGCATAGGTTTAGCAGTATAGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CAA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGCTGTGGAGGCTGATTTaGGGGACCTCAATGTTGAGA +
Preference number: 5 (lower is better)
Translates to: NYEIQNSGATILLNLCMKLWRLI*GTSMLR
Trigger: TCTCAACATTGAGGTCCCCAAAATCAGCCTCCACAG...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR CAA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGGTTGGCTGTGGCAAGTaGAAGACCTTTGCAACTATG +
Preference number: 5 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMVGCGK*KTFATM
Trigger: CATAGTTGCAAAGGTCTTCAACTTGCCACAGCCAAC...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CAA 90 bp GAGAATACAGAGTATAGTACTTTGAAAATTGAAACTGGATCAGTGTGTGACGGGGTTGGCTGTGGCAAGTaGAAGACCTTTGCAACTATG +
Preference number: 5 (lower is better)
Translates to: ENTEYSTLKIETGSVCDGVGCGK*KTFATM
Trigger: CATAGTTGCAAAGGTCTTCAACTTGCCACAGCCAAC...CCCGTCACACACTGATCCAGTTTCAATTTTCAAAGTACTATACTCTGTATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS-3UTR CAA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGGATCTGGGACTGCTTTaGAAACTGCTCCTGAAACTG +
Preference number: 5 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMDLGLL*KLLLKL
Trigger: CAGTTTCAGGAGCAGTTTCAAAAGCAGTCCCAGATC...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CAA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGGCTGCATTTTGGAAATaGGGTCCTGAACACGATGGT +
Preference number: 5 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMAAFWK*GPEHDG
Trigger: ACCATCGTGTTCAGGACCCAATTTCCAAAATGCAGC...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CAA 90 bp ATCAGCATTCCCTTTAAGTTTCCCAATGCTAAAGCTGCCAGGACGGACTTTTGTATTTTCCTCAAAGCTTaGTTGCGCTTGCGTAGAATT +
Preference number: 5 (lower is better)
Translates to: ISIPFKFPNAKAARTDFCIFLKA*LRLRRI
Trigger: AATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAAT...ACAAAAGTCCGTCCTGGCAGCTTTAGCATTGGGAAACTTAAAGGGAATGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379083.7
CDS TCA 90 bp ACACAACCCCACCTCAACATATGTGACACAACCCAGTCTCAACAATaGCCTTACAGAACAATGACATTCCCAGAATTCAGTAAGATTACA +
Preference number: 5 (lower is better)
Translates to: TQPHLNICDTTQSQQ*PYRTMTFPEFSKIT
Trigger: TGTAATCTTACTGAATTCTGGGAATGTCATTGTTCTGTAAGGTCATTGTTGAGACTGGGTTGTGTCACATATGTTGAGGTGGGGTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469651.1
CDS-3UTR CAA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGAATTCTCTTGGCCTTTaGTGGGGAACAGCTACAACA +
Preference number: 5 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMNSLGL*WGTATT
Trigger: TGTTGTAGCTGTTCCCCACAAAAGGCCAAGAGAATT...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS-3UTR CAA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGAAAGCTTTGTTGCGCTaGCGTAGAATTCGAAGTGGA +
Preference number: 5 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMKALLR*RRIRSG
Trigger: TCCACTTCGAATTCTACGCAAGCGCAACAAAGCTTT...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS TCA 90 bp CCAAAGGGTTCAATCATTTTGATTTTTCTGTTGGCTGTGGCAAGTTaGAGACCTTTGCAACTATGTGGTGAACACTTCTTCTTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: PKGSIILIFLLAVAS*RPLQLCGEHFFLPL
Trigger: TAAAGGCAAGAAGAAGTGTTCACCACATAGTTGCAAAGGTCTTCAACTTGCCACAGCCAACAGAAAAATCAAAATGATTGAACCCTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340010.10
ENST00000379083.7
ENST00000453332.1
CDS-3UTR CAA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGATTTTCCTCAAAGCTTaGTTGCGCTTGCGTAGAATT +
Preference number: 5 (lower is better)
Translates to: NYEIQNSGATILLNLCMKIFLKA*LRLRRI
Trigger: AATTCTACGCAAGCGCAACAAAGCTTTGAGGAAAAT...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS GCA 90 bp AAACCTTACAGCATCGATAAGTTTCCGCCTAAAGAAACCAATGTTTaGAAAGTAGATAGGAGATGGACATCTGAAAATTTTCACTCCTTC +
Preference number: 5 (lower is better)
Translates to: KPYSIDKFPPKETNV*KVDRRWTSENFHSF
Trigger: GAAGGAGTGAAAATTTTCAGATGTCCATCTCCTATCTACTTTGCAAACATTGGTTTCTTTAGGCGGAAACTTATCGATGCTGTAAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469651.1
CDS CCA 90 bp CTTATAGATGTTGGTTCTTCCAATATTAGCCAGCGTGCTGCATTTTaGACTGTAGGGAGAAAAACACCAAGTAAATCATTCATGTATGTT +
Preference number: 5 (lower is better)
Translates to: LIDVGSSNISQRAAF*TVGRKTPSKSFMYV
Trigger: AACATACATGAATGATTTACTTGGTGTTTTTCTCCCTACAGTCCAAAATGCAGCACGCTGGCTAATATTGGAAGAACCAACATCTATAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469651.1
CDS-3UTR CAA 90 bp AATTATGAGATTCAAAACAGTGGCGCCACTATACTGCTAAACCTATGCATGAAGGAAGAATTATTCGAGTaGTTAGGCAATCCCAAAGTA +
Preference number: 5 (lower is better)
Translates to: NYEIQNSGATILLNLCMKEELFE*LGNPKV
Trigger: TACTTTGGGATTGCCTAACAACTCGAATAATTCTTC...CTTCATGCATAGGTTTAGCAGTATAGTGGCGCCACTGTTTTGAATCTCATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000379083.7
CDS-3UTR CAA 90 bp CTATGCATGAAGGTAGTGACTAGGATGGAAATCTGTCAGTGCTACAAAAATATGGATCCTGATAAATTCTaGCAAAATCGATTTAAGGCC +
Preference number: 5 (lower is better)
Translates to: LCMKVVTRMEICQCYKNMDPDKF*QNRFKA
Trigger: GGCCTTAAATCGATTTTGCAAGAATTTATCAGGATC...CATATTTTTGTAGCACTGACAGATTTCCATCCTAGTCACTACCTTCATGCATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS GCA 72 bp CAACCATTCTTTAAGCCGGTATGCTGGCAACCAAGATaGTATGGGGAACAAAGAGAGGACAATTCTCTTGGC +
Preference number: 6 (lower is better)
Translates to: QPFFKPVCWQPR*YGEQREDNSLG
Trigger: GCCAAGAGAATTGTCCTCTCTTTGTTCCCCATAGCATCTTGGTTGCCAGCATACCGGCTTAAAGAATGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000453332.1
CDS CCA 72 bp CCAGTCAATGTGGAAAGGCAGGTCTGTGGTATTGATTaGCTGGTCCAGTACTTCTATCTGATTGTTGTCCAG +
Preference number: 6 (lower is better)
Translates to: PVNVERQVCGID*LVQYFYLIVVQ
Trigger: CTGGACAACAATCAGATAGAAGTACTGGACCAGCCAATCAATACCACAGACCTGCCTTTCCACATTGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS CCA 72 bp TCAATGTTGAGAGGAAGATCATCATTCCAGTCAATGTaGAAAGGCAGGTCTGTGGTATTGATTGGCTGGTCC +
Preference number: 6 (lower is better)
Translates to: SMLRGRSSFQSM*KGRSVVLIGWS
Trigger: GGACCAGCCAATCAATACCACAGACCTGCCTTTCCACATTGACTGGAATGATGATCTTCCTCTCAACATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS GCA 72 bp AACAATATCACTGAGCAACCATTCTTTAAGCCGGTATaGTGGCAACCAAGATGCTATGGGGAACAAAGAGAG +
Preference number: 6 (lower is better)
Translates to: NNITEQPFFKPV*WQPRCYGEQRE
Trigger: CTCTCTTTGTTCCCCATAGCATCTTGGTTGCCAGCATACCGGCTTAAAGAATGGTTGCTCAGTGATATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000453332.1
CDS CAA 72 bp TATGGGGAACAAAGAGAGGACAATTCTCTTGGCCTTTaGTGGGGAACAGCTACAACACACTTTGAGATGATC +
Preference number: 6 (lower is better)
Translates to: YGEQREDNSLGL*WGTATTHFEMI
Trigger: GATCATCTCAAAGTGTGTTGTAGCTGTTCCCCACAAAAGGCCAAGAGAATTGTCCTCTCTTTGTTCCCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340010.10
ENST00000453332.1
CDS TCA 72 bp GGCTGTGGCAAGTTGAAGACCTTTGCAACTATGTGGTaGACACTTCTTCTTGCCTTTAGCAGGTTAAAAATG +
Preference number: 6 (lower is better)
Translates to: GCGKLKTFATMW*TLLLAFSRLKM
Trigger: CATTTTTAACCTGCTAAAGGCAAGAAGAAGTGTTCACCACATAGTTGCAAAGGTCTTCAACTTGCCACAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340010.10
ENST00000379083.7
ENST00000453332.1
CDS TCA 72 bp CACCTCAACATATGTGACACAACCCAGTCTCAACAATaGCCTTACAGAACAATGACATTCCCAGAATTCAGT +
Preference number: 6 (lower is better)
Translates to: HLNICDTTQSQQ*PYRTMTFPEFS
Trigger: ACTGAATTCTGGGAATGTCATTGTTCTGTAAGGTCATTGTTGAGACTGGGTTGTGTCACATATGTTGAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469651.1
CDS TCA 72 bp TCAATCATTTTGATTTTTCTGTTGGCTGTGGCAAGTTaGAGACCTTTGCAACTATGTGGTGAACACTTCTTC +
Preference number: 6 (lower is better)
Translates to: SIILIFLLAVAS*RPLQLCGEHFF
Trigger: GAAGAAGTGTTCACCACATAGTTGCAAAGGTCTTCAACTTGCCACAGCCAACAGAAAAATCAAAATGATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340010.10
ENST00000379083.7
ENST00000453332.1
CDS TCA 72 bp GCATTTGTAGAATACACTGGCCTGGCCACAATATACTaGTTCCCAAAGGGTTCAATCATTTTGATTTTTCTG +
Preference number: 6 (lower is better)
Translates to: AFVEYTGLATIY*FPKGSIILIFL
Trigger: CAGAAAAATCAAAATGATTGAACCCTTTGGGAATCAGTATATTGTGGCCAGGCCAGTGTATTCTACAAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340010.10
ENST00000379083.7
ENST00000453332.1
CDS CCA 72 bp TTTATGATTTTCCTCAAAAGCATTTGTAGAATACACTaGCCTGGCCACAATATACTGATTCCCAAAGGGTTC +
Preference number: 6 (lower is better)
Translates to: FMIFLKSICRIH*PGHNILIPKGF
Trigger: GAACCCTTTGGGAATCAGTATATTGTGGCCAGGCCAGTGTATTCTACAAATGCTTTTGAGGAAAATCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340010.10
ENST00000379083.7
ENST00000453332.1
CDS CAA 90 bp TTCTCAATGAAGTCATCATCAGTTCCAACGATATACACATCTACCTaGATCCTGATAAATTCTTGCAAAATCGATTTAAGGCCCCTCACT +
Preference number: 6 (lower is better)
Translates to: FSMKSSSVPTIYTST*ILINSCKIDLRPLT
Trigger: AGTGAGGGGCCTTAAATCGATTTTGCAAGAATTTATCAGGATCAAGGTAGATGTGTATATCGTTGGAACTGATGATGACTTCATTGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340010.10
CDS TCA 72 bp ACACAACCCAGTCTCAACAATGACCTTACAGAACAATaGCATTCCCAGAATTCAGTAAGATTACAAGGAAAA +
Preference number: 6 (lower is better)
Translates to: TQPSLNNDLTEQ*HSQNSVRLQGK
Trigger: TTTTCCTTGTAATCTTACTGAATTCTGGGAATGTCATTGTTCTGTAAGGTCATTGTTGAGACTGGGTTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469651.1