RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC26A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000145217

Ensembl transcript IDs: ENST00000361661.6, ENST00000398516.3, ENST00000398520.6, ENST00000622731.4

Found 494 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTaGTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGG +
Preference number: 1 (lower is better)
Translates to: APSLTAASSRSGPTG*WSLSPPGGRRAGSG
Trigger: CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR TCA 90 bp ACGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTaGACGTGTGTGTCAGCCGCGCTGCCAGCCATGCTGAGGCTCGGG +
Preference number: 1 (lower is better)
Translates to: THGQRLDPAPGQSWA*TCVSAALPAMLRLG
Trigger: CCCGAGCCTCAGCATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR TCA 90 bp CTGAGGGCTGAGCTGAGGTCTCATCGGTCACAGCACCCTGGGCCCTaGCGCTGGTGCAGGTGGCCACCCTGTGAGGGGGAGGCACGAGGT +
Preference number: 1 (lower is better)
Translates to: LRAELRSHRSQHPGP*RWCRWPPCEGEARG
Trigger: ACCTCGTGCCTCCCCCTCACAGGGTGGCCACCTGCACCAGCGTCAGGGCCCAGGGTGCTGTGACCGATGAGACCTCAGCTCAGCCCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CCA 90 bp GACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTaGGCACCGGGCAGGCCTGGGCATAGGGAGTCCTCTTGGCACCTT +
Preference number: 1 (lower is better)
Translates to: DPRALGQSRWLLPAG*APGRPGHRESSWHL
Trigger: AAGGTGCCAAGAGGACTCCCTATGCCCAGGCCTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR TCA 90 bp GTGTGTCTGCTGGCCAGGCTGGGTAGGGCCACTGCACCTGAGGGCTaGGCTGAGGTCTCATCGGTCACAGCACCCTGGGCCCTGACGCTG +
Preference number: 1 (lower is better)
Translates to: VCLLARLGRATAPEG*AEVSSVTAPWALTL
Trigger: CAGCGTCAGGGCCCAGGGTGCTGTGACCGATGAGACCTCAGCTCAGCCCTCAGGTGCAGTGGCCCTACCCAGCCTGGCCAGCAGACACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CCA 90 bp GAGTGCAGCTCTTGGGTGGCTCCTCCCTGGGAAGGGTCTCAGCAGTaGCTTGCAGACGTCTGCTGTGGGTCCCCAGGAGGGAGCAGAGGC +
Preference number: 1 (lower is better)
Translates to: ECSSWVAPPWEGSQQ*LADVCCGSPGGSRG
Trigger: GCCTCTGCTCCCTCCTGGGGACCCACAGCAGACGTCTGCAAGCCACTGCTGAGACCCTTCCCAGGGAGGAGCCACCCAAGAGCTGCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CCA 90 bp ACCAGTACGTCCTCAGCTGGGACCAGCAGCTCAACCTCGCCTATGTaGGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACT +
Preference number: 1 (lower is better)
Translates to: TSTSSAGTSSSTSPM*APSLTAASSRSGPT
Trigger: AGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGCTGAGGACGTACTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CCA 90 bp CCAGCAGGGTGGGCACCGGGCAGGCCTGGGCATAGGGAGTCCTCTTaGCACCTTGGAGGCTGCATGATGGCGGGGGACCCTTGTTCAAAT +
Preference number: 1 (lower is better)
Translates to: PAGWAPGRPGHRESS*HLGGCMMAGDPCSN
Trigger: ATTTGAACAAGGGTCCCCCGCCATCATGCAGCCTCCAAGGTGCCAAGAGGACTCCCTATGCCCAGGCCTGCCCGGTGCCCACCCTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CCA 90 bp AGGGCAGCTGTGGCACAAGAGTGCAGCTCTTGGGTGGCTCCTCCCTaGGAAGGGTCTCAGCAGTGGCTTGCAGACGTCTGCTGTGGGTCC +
Preference number: 1 (lower is better)
Translates to: RAAVAQECSSWVAPP*EGSQQWLADVCCGS
Trigger: GGACCCACAGCAGACGTCTGCAAGCCACTGCTGAGACCCTTCCCAGGGAGGAGCCACCCAAGAGCTGCACTCTTGTGCCACAGCTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CCA 90 bp GAGTGTTTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTaGGGTTCCCCGGTTTCCCCAGGGCAGCTGTGGCACAAGAGTGCA +
Preference number: 1 (lower is better)
Translates to: ECLGPACDQRASFPS*GSPVSPGQLWHKSA
Trigger: TGCACTCTTGTGCCACAGCTGCCCTGGGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAAACACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR GCA 90 bp CCGGGCAGGCCTGGGCATAGGGAGTCCTCTTGGCACCTTGGAGGCTaGATGATGGCGGGGGACCCTTGTTCAAATAAGATGTCAACCCTG +
Preference number: 1 (lower is better)
Translates to: PGRPGHRESSWHLGG*MMAGDPCSNKMSTL
Trigger: CAGGGTTGACATCTTATTTGAACAAGGGTCCCCCGCCATCATGCAGCCTCCAAGGTGCCAAGAGGACTCCCTATGCCCAGGCCTGCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CCA 90 bp GCCCTAAGGGTCATTTTATTAGTCACTGAACGCACGGGCAGCGCCTaGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAG +
Preference number: 1 (lower is better)
Translates to: ALRVILLVTERTGSA*ILRPGSPGLERVCQ
Trigger: CTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCGTTCAGTGACTAATAAAATGACCCTTAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR TCA 90 bp GCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGCACCCTGGGCCCTaGCGCTGGTGCAGGTGGCCA +
Preference number: 2 (lower is better)
Translates to: AGPDPLAAGACHHQVGGGQHPGP*RWCRWP
Trigger: TGGCCACCTGCACCAGCGTCAGGGCCCAGGGTGCTG...CCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp GGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGGCCGCACCTGGCTCCTaGTGCACCCGTGAGCATCCC +
Preference number: 2 (lower is better)
Translates to: GAVPHRGIKQVRTHWLLEAAPGS*CTREHP
Trigger: GGGATGCTCACGGGTGCACCAGGAGCCAGGTGCGGC...CTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CAA 90 bp AACGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTaGAACGTGTGTGTCAGCCGCGCTGCCAGCCATGCTGAGGCTCGG +
Preference number: 2 (lower is better)
Translates to: NARAAPGSCARAVLG*NVCVSRAASHAEAR
Trigger: CCGAGCCTCAGCATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCGTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR TCA 90 bp CGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGCCATCCCTCCTGAGCTaGGGGACGGTGCATTGGGGC +
Preference number: 2 (lower is better)
Translates to: RALGQSRWLLPAGWAPGRPSLLS*GTVHWG
Trigger: GCCCCAATGCACCGTCCCTCAGCTCAGGAGGGATGG...CCTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR TCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGGGGAGGCACGAGGTGTaGGGGGCACTTGGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: RTGSAWILRPGSPGLERVGRHEV*GALGCV
Trigger: CACACACCCAAGTGCCCCTCACACCTCGTGCCTCCC...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR GCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCAGGCTCAGGGTTGGCTaGGCCGCACCTGGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: APGSCARAVLGLNVCVSRRLRVG*AAPGSW
Trigger: CCAGGAGCCAGGTGCGGCGCAGCCAACCCTGAGCCT...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR GCA 90 bp GGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGGGGAGGGCTGGGGGCTaGTCGGAAGACCCCTTGTTC +
Preference number: 2 (lower is better)
Translates to: GAVPHRGIKQVRTHWLLEGRAGG*SEDPLF
Trigger: GAACAAGGGGTCTTCCGAGCAGCCCCCAGCCCTCCC...CTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp GCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCTTGGCCAGAGCCGCTaGCTCCTACCAGCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: AGPDPLAAGACHHQVGGGLGQSR*LLPAGW
Trigger: CCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAG...CCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGAGGGAGCCCCTGCATaGGGCACGGTGGGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: APGSCARAVLGLNVCVSREGAPA*GTVGFL
Trigger: CAGGAAGCCCACCGTGCCCCATGCAGGGGCTCCCTC...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATGCGGCGGGCAGGGTCTaGGCGTCCCAGAGCCCCTTA +
Preference number: 2 (lower is better)
Translates to: CARAVLGLNVCVSRAASHAAGRV*ASQSPL
Trigger: TAAGGGGCTCTGGGACGCCCAGACCCTGCCCGCCGC...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCCTTGTCACCACCAGGTaGGCGGCGGGCAGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVLVTTR*AAGRVW
Trigger: CCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAG...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR TCA 90 bp CCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGGCAGGCCCATCCCTCCTaGGCTGAGGGACGGTGCATT +
Preference number: 2 (lower is better)
Translates to: PTGCWSLSPPGGRRAGSGQAHPS*AEGRCI
Trigger: AATGCACCGTCCCTCAGCTCAGGAGGGATGGGCCTG...CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR TCA 90 bp GCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGCCCATCCCTCCTaGGCTGAGGGACGGTGCATT +
Preference number: 2 (lower is better)
Translates to: AGPDPLAAGACHHQVGGGQAHPS*AEGRCI
Trigger: AATGCACCGTCCCTCAGCTCAGGAGGGATGGGCCTG...CCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR TCA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCGCTGAGGCTCGGGACTaGGCCGCCCCTTTGTTGTCC +
Preference number: 2 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVAEARD*AAPLLS
Trigger: GGACAACAAAGGGGCGGCTCAGTCCCGAGCCTCAGC...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR GCA 90 bp GGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGTGGCTTGCAGACGTCTaGTGTGGGTCCCCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: GAVPHRGIKQVRTHWLLEWLADV*CGSPGG
Trigger: CCCTCCTGGGGACCCACAGCAGACGTCTGCAAGCCA...CTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR GCA 90 bp GGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGTGGCACCTTGGAGGCTaGATGATGGCGGGGGACCCT +
Preference number: 2 (lower is better)
Translates to: GAVPHRGIKQVRTHWLLEWHLGG*MMAGDP
Trigger: AGGGTCCCCCGCCATCATGCAGCCTCCAAGGTGCCA...CTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR GCA 90 bp CCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGGGCACCTGGCTCCTGGTaGACCCGTGAGCATCCCTGT +
Preference number: 2 (lower is better)
Translates to: PTGCWSLSPPGGRRAGSGAPGSW*TREHPC
Trigger: ACAGGGATGCTCACGGGTGCACCAGGAGCCAGGTGC...CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR GCA 90 bp CTCCCGCCGAAGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGGCTGGAGGGAGCCCCTaGATGGGGCACGGTGGGCTT +
Preference number: 2 (lower is better)
Translates to: LPPKHPVGESVSLLAVLGAGGSP*MGHGGL
Trigger: AAGCCCACCGTGCCCCATGCAGGGGCTCCCTCCAGC...CCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR GCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGGGGAGAGCGTGTCCTTaGTGGCTGTGCTGGGGTGAG +
Preference number: 2 (lower is better)
Translates to: RTGSAWILRPGSPGLERVGRACP*WLCWGE
Trigger: CTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCC...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp CCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGGTGCAGACGTCTGCTGTaGGTCCCCAGGAGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: PTGCWSLSPPGGRRAGSGCRRLL*VPRREQ
Trigger: CTGCTCCCTCCTGGGGACCCACAGCAGACGTCTGCA...CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGAGACCCTCGTGCACTTaGCCAGAGCCGCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: RTGSAWILRPGSPGLERVRPSCT*PEPLAP
Trigger: AGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp CCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGGGGTGTGAGGGGCACTTaGGTGTGTGGGGCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: PTGCWSLSPPGGRRAGSGGVRGT*VCGAFW
Trigger: CCAGAAGGCCCCACACACCCAAGTGCCCCTCACACC...CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGAGAGCGTGTCCTTGCTaGCTGTGCTGGGGTGAGGGC +
Preference number: 2 (lower is better)
Translates to: RTGSAWILRPGSPGLERVRACPC*LCWGEG
Trigger: GCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCT...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp GGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGAGAGCGTGTCCTTGCTaGCTGTGCTGGGGTGAGGGC +
Preference number: 2 (lower is better)
Translates to: GAVPHRGIKQVRTHWLLERACPC*LCWGEG
Trigger: GCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCT...CTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR TCA 90 bp CGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGACCTTGGAGGCTGCATaGTGGCGGGGGACCCTTGTT +
Preference number: 2 (lower is better)
Translates to: RALGQSRWLLPAGWAPGRTLEAA*WRGTLV
Trigger: AACAAGGGTCCCCCGCCATCATGCAGCCTCCAAGGT...CCTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR GCA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCTGGCTTGCAGACGTCTaGTGTGGGTCCCCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVWLADV*CGSPGG
Trigger: CCCTCCTGGGGACCCACAGCAGACGTCTGCAAGCCA...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATTCGGTCACAGCACCCTaGGCCCTGACGCTGGTGCAG +
Preference number: 2 (lower is better)
Translates to: CARAVLGLNVCVSRAASHSVTAP*ALTLVQ
Trigger: CTGCACCAGCGTCAGGGCCCAGGGTGCTGTGACCGA...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCACCTGTGTGTGTCTGCTaGCCAGGCTGGGTAGGGCCA +
Preference number: 2 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAAPVCVC*PGWVGP
Trigger: TGGCCCTACCCAGCCTGGCCAGCAGACACACACAGG...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR GCA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCAACACAGAGACCCTCGTaGACTTGGCCAGAGCCGCTG +
Preference number: 2 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAATQRPS*TWPEPL
Trigger: CAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp CCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGGCAAGAGTGCAGCTCTTaGGTGGCTCCTCCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: PTGCWSLSPPGGRRAGSGQECSS*VAPPWE
Trigger: TTCCCAGGGAGGAGCCACCCAAGAGCTGCACTCTTG...CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGTCCTCTTGGCACCTTaGAGGCTGCATGATGGCGGG +
Preference number: 2 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQVLLAP*RLHDGG
Trigger: CCCGCCATCATGCAGCCTCCAAGGTGCCAAGAGGAC...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATAGACCCTCGTGCACTTaGCCAGAGCCGCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: CARAVLGLNVCVSRAASHRPSCT*PEPLAP
Trigger: AGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGGGGCACTTGGGTGTGTaGGGCCTTCTGGAAACACAG +
Preference number: 2 (lower is better)
Translates to: RTGSAWILRPGSPGLERVGHLGV*GLLETQ
Trigger: CTGTGTTTCCAGAAGGCCCCACACACCCAAGTGCCC...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCGCCGAAGCACCCTGTTaGGGAGAGCGTGTCCTTGCT +
Preference number: 2 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVAEAPC*GERVLA
Trigger: AGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGC...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGGACCCACTGGCTGCTaGAGCTTGTCACCACCAGGT +
Preference number: 2 (lower is better)
Translates to: APGSCARAVLGLNVCVSRGPTGC*SLSPPG
Trigger: ACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCC...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR TCA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCATTTGGGTCCTGCGTGTaGTCAGAGGGCCTCCTTTCC +
Preference number: 2 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAAFGSCV*SEGLLS
Trigger: GGAAAGGAGGCCCTCTGATCACACGCAGGACCCAAA...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR TCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCTTTGGGTCCTGCGTGTaGTCAGAGGGCCTCCTTTCC +
Preference number: 2 (lower is better)
Translates to: APGSCARAVLGLNVCVSRFGSCV*SEGLLS
Trigger: GGAAAGGAGGCCCTCTGATCACACGCAGGACCCAAA...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR TCA 90 bp GCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGGGGAGGCACGAGGTGTaGGGGGCACTTGGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: ASSRSGPTGCWSLSPPGGGRHEV*GALGCV
Trigger: CACACACCCAAGTGCCCCTCACACCTCGTGCCTCCC...CCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR GCA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATTCCGGACCCACTGGCTaGTGGAGCTTGTCACCACCA +
Preference number: 2 (lower is better)
Translates to: CARAVLGLNVCVSRAASHSGPTG*WSLSPP
Trigger: TGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGA...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp AGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGTCCTCTTGGCACCTTaGAGGCTGCATGATGGCGGG +
Preference number: 2 (lower is better)
Translates to: RPSCTWPEPLAPTSRVGTVLLAP*RLHDGG
Trigger: CCCGCCATCATGCAGCCTCCAAGGTGCCAAGAGGAC...GGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGGGCACTTGGGTGTGTaGGGCCTTCTGGAAACACAG +
Preference number: 2 (lower is better)
Translates to: APGSCARAVLGLNVCVSRGHLGV*GLLETQ
Trigger: CTGTGTTTCCAGAAGGCCCCACACACCCAAGTGCCC...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR GCA 90 bp CTCCCGCCGAAGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGGCTGTGGCACAAGAGTaGAGCTCTTGGGTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: LPPKHPVGESVSLLAVLGAVAQE*SSWVAP
Trigger: AGGAGCCACCCAAGAGCTGCACTCTTGTGCCACAGC...CCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp AGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCAGCCTCCTTTCCCAGTTaGGGTTCCCCGGTTTCCCCA +
Preference number: 2 (lower is better)
Translates to: RDPRALGQSRWLLPAGWAASFPS*GSPVSP
Trigger: TGGGGAAACCGGGGAACCCCAACTGGGAAAGGAGGC...TGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTCCTGTGTGTGTCTGCTaGCCAGGCTGGGTAGGGCCA +
Preference number: 2 (lower is better)
Translates to: STLLGRACPCWLCWGEGCPVCVC*PGWVGP
Trigger: TGGCCCTACCCAGCCTGGCCAGCAGACACACACAGG...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR TCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGGAGGTTCTTGATTTCTaGGTGTTTGGGTCCTGCGTG +
Preference number: 2 (lower is better)
Translates to: RTGSAWILRPGSPGLERVEVLDF*VFGSCV
Trigger: CACGCAGGACCCAAACACTCAGAAATCAAGAACCTC...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR TCA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCAATAAGATGTCAACCCTaGGCGTCAGGTCAGGCCCAT +
Preference number: 2 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAAIRCQP*ASGQAH
Trigger: ATGGGCCTGACCTGACGCTCAGGGTTGACATCTTAT...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR TCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTACCTTGGAGGCTGCATaGTGGCGGGGGACCCTTGTT +
Preference number: 2 (lower is better)
Translates to: STLLGRACPCWLCWGEGCTLEAA*WRGTLV
Trigger: AACAAGGGTCCCCCGCCATCATGCAGCCTCCAAGGT...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp GTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTTCCCTGCAGACGTCTGCTGTaGGTCCCCAGGAGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: VLRVIRGPPFPVGVPRFPCRRLL*VPRREQ
Trigger: CTGCTCCCTCCTGGGGACCCACAGCAGACGTCTGCA...GGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR TCA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCGAGGTTCTTGATTTCTaGGTGTTTGGGTCCTGCGTG +
Preference number: 2 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVEVLDF*VFGSCV
Trigger: CACGCAGGACCCAAACACTCAGAAATCAAGAACCTC...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CAA 90 bp GCCCAGCCAGCACTGTGGGCCAGCCTGTCTCGGAGGCAGAGGTTCTaGATTTCTGAGTGTTTGGGTCCTGCGTGTGATCAGAGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: AQPALWASLSRRQRF*ISECLGPACDQRAS
Trigger: GGAGGCCCTCTGATCACACGCAGGACCCAAACACTCAGAAATCAAGAACCTCTGCCTCCGAGACAGGCTGGCCCACAGTGCTGGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR GCA 90 bp GTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTTCCCGCTGTGGCACAAGAGTaGAGCTCTTGGGTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: VLRVIRGPPFPVGVPRFPAVAQE*SSWVAP
Trigger: AGGAGCCACCCAAGAGCTGCACTCTTGTGCCACAGC...GGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp ACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGAAGGGTCTCAGCAGTaGCTTGCAGACGTCTGCTGT +
Preference number: 2 (lower is better)
Translates to: TQRPSCTWPEPLAPTSRVEGSQQ*LADVCC
Trigger: ACAGCAGACGTCTGCAAGCCACTGCTGAGACCCTTC...CACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CCA 90 bp GCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGGAAGGGTCTCAGCAGTaGCTTGCAGACGTCTGCTGT +
Preference number: 2 (lower is better)
Translates to: ASSRSGPTGCWSLSPPGGEGSQQ*LADVCC
Trigger: ACAGCAGACGTCTGCAAGCCACTGCTGAGACCCTTC...CCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR TCA 90 bp ACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGATAAGATGTCAACCCTaGGCGTCAGGTCAGGCCCAT +
Preference number: 2 (lower is better)
Translates to: TQRPSCTWPEPLAPTSRVIRCQP*ASGQAH
Trigger: ATGGGCCTGACCTGACGCTCAGGGTTGACATCTTAT...CACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR TCA 90 bp ACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGAGGCAGAGGTTCTTaGTTTCTGAGTGTTTGGGTC +
Preference number: 2 (lower is better)
Translates to: TQRPSCTWPEPLAPTSRVGGRGS*FLSVWV
Trigger: GACCCAAACACTCAGAAATCAAGAACCTCTGCCTCC...CACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CAA 90 bp TGGGCCAGCCTGTCTCGGAGGCAGAGGTTCTTGATTTCTGAGTGTTaGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGT +
Preference number: 2 (lower is better)
Translates to: WASLSRRQRFLISEC*GPACDQRASFPSWG
Trigger: ACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAAACACTCAGAAATCAAGAACCTCTGCCTCCGAGACAGGCTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR TCA 90 bp TTGCTTTACAGAAATGTACTGATGACTGGTTACATCATCCACATGGTAAAGCCTTCCACCGGCTTCTCGTaGGGCTGGTGTGAGGGTCCC +
Preference number: 2 (lower is better)
Translates to: LLYRNVLMTGYIIHMVKPSTGFS*GWCEGP
Trigger: GGGACCCTCACACCAGCCTCACGAGAAGCCGGTGGA...AGGCTTTACCATGTGGATGATGTAACCAGTCATCAGTACATTTCTGTAAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
3UTR-3UTR TCA 90 bp TTGCTTTACAGAAATGTACTGATGACTGGTTACATCATCCACATGGTAAAGCCTTTTTTCCCCAGGTGCTaGTCCAAGCCTCCCTCTGGA +
Preference number: 2 (lower is better)
Translates to: LLYRNVLMTGYIIHMVKPFFPRC*SKPPSG
Trigger: TCCAGAGGGAGGCTTGGATCAGCACCTGGGGAAAAA...AGGCTTTACCATGTGGATGATGTAACCAGTCATCAGTACATTTCTGTAAAGCAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398520.6
3UTR-3UTR TCA 90 bp CTTTACAGAAATGTACTGATGACTGGTTACATCATCCACATGGTAAAGCCTGTTCATTCTCGATGTCGTTaGTGTCGGCATTTCCTGTTA +
Preference number: 2 (lower is better)
Translates to: LYRNVLMTGYIIHMVKPVHSRCR*CRHFLL
Trigger: TAACAGGAAATGCCGACATCAACGACATCGAGAATG...AACAGGCTTTACCATGTGGATGATGTAACCAGTCATCAGTACATTTCTGTAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
3UTR CCA 72 bp CGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTaGGCGGCGGGCAGGGTCTGGGCGTCCCAGAGCCCC +
Preference number: 3 (lower is better)
Translates to: RTHWLLELVTTR*AAGRVWASQSP
Trigger: GGGGCTCTGGGACGCCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CAA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGGAGACCCTCGTGCACTaGGCCAGAGCCGCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: RTGSAWILRPGSPGLERVETLVH*ARAAGS
Trigger: GGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTC...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CAA 90 bp GGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGGAGACCCTCGTGCACTaGGCCAGAGCCGCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: GAVPHRGIKQVRTHWLLEETLVH*ARAAGS
Trigger: GGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTC...CTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CCA 72 bp ACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTaGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: TAASSRSGPTGC*SLSPPGGRRAG
Trigger: CCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CAA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCAGGCCTCCTTTCCCAGTaGGGGTTCCCCGGTTTCCCC +
Preference number: 3 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAAGLLSQ*GFPGFP
Trigger: GGGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCC...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CAA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGAGGTGTGAGGGGCACTaGGGTGTGTGGGGCCTTCTG +
Preference number: 3 (lower is better)
Translates to: RTGSAWILRPGSPGLERVRCEGH*GVWGLL
Trigger: CAGAAGGCCCCACACACCCAAGTGCCCCTCACACCT...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CAA 90 bp GGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGAGGTGTGAGGGGCACTaGGGTGTGTGGGGCCTTCTG +
Preference number: 3 (lower is better)
Translates to: GAVPHRGIKQVRTHWLLERCEGH*GVWGLL
Trigger: CAGAAGGCCCCACACACCCAAGTGCCCCTCACACCT...CTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CAA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCACGCCGAAGCACCCTGTaGGGGAGAGCGTGTCCTTGC +
Preference number: 3 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAARRSTL*GRACPC
Trigger: GCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCG...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR TCA 72 bp CAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTaGACGTGTGTGTCAGCCGCGCTGCCAGCCATGCTG +
Preference number: 3 (lower is better)
Translates to: QRLDPAPGQSWA*TCVSAALPAML
Trigger: CAGCATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR GCA 72 bp CTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTaGTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCA +
Preference number: 3 (lower is better)
Translates to: LTAASSRSGPTG*WSLSPPGGRRA
Trigger: TGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CCA 72 bp GCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTaGGCACCGGGCAGGCCTGGGCATAGGGAGTCCTCT +
Preference number: 3 (lower is better)
Translates to: ALGQSRWLLPAG*APGRPGHRESS
Trigger: AGAGGACTCCCTATGCCCAGGCCTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CAA 90 bp AGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGCCTCCTTTCCCAGTaGGGGTTCCCCGGTTTCCCC +
Preference number: 3 (lower is better)
Translates to: RPSCTWPEPLAPTSRVGTGLLSQ*GFPGFP
Trigger: GGGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCC...GGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR TCA 72 bp GAGCTGAGGTCTCATCGGTCACAGCACCCTGGGCCCTaGCGCTGGTGCAGGTGGCCACCCTGTGAGGGGGAG +
Preference number: 3 (lower is better)
Translates to: ELRSHRSQHPGP*RWCRWPPCEGE
Trigger: CTCCCCCTCACAGGGTGGCCACCTGCACCAGCGTCAGGGCCCAGGGTGCTGTGACCGATGAGACCTCAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR TCA 72 bp CTGGCCAGGCTGGGTAGGGCCACTGCACCTGAGGGCTaGGCTGAGGTCTCATCGGTCACAGCACCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: LARLGRATAPEG*AEVSSVTAPWA
Trigger: GGCCCAGGGTGCTGTGACCGATGAGACCTCAGCTCAGCCCTCAGGTGCAGTGGCCCTACCCAGCCTGGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CCA 72 bp AAACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTaGCTCCTACCAGCAGGGTGGGCACCGGGCAGGCCT +
Preference number: 3 (lower is better)
Translates to: KHRDPRALGQSR*LLPAGWAPGRP
Trigger: AGGCCTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CCA 72 bp TCCTCAGCTGGGACCAGCAGCTCAACCTCGCCTATGTaGGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCC +
Preference number: 3 (lower is better)
Translates to: SSAGTSSSTSPM*APSLTAASSRS
Trigger: GGACCTGCTTGATGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGCTGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CAA 90 bp CTCCCGCCGAAGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGGGTCTCAGCAGTGGCTaGCAGACGTCTGCTGTGGGT +
Preference number: 3 (lower is better)
Translates to: LPPKHPVGESVSLLAVLGGLSSG*QTSAVG
Trigger: ACCCACAGCAGACGTCTGCAAGCCACTGCTGAGACC...CCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCGGGAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CAA 90 bp AGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGTCTCAGCAGTGGCTaGCAGACGTCTGCTGTGGGT +
Preference number: 3 (lower is better)
Translates to: RPSCTWPEPLAPTSRVGTGLSSG*QTSAVG
Trigger: ACCCACAGCAGACGTCTGCAAGCCACTGCTGAGACC...GGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR TCA 72 bp CTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATGCTaGGGCTCGGGACTGAGCCGCCCCTTTGTTGTCCCC +
Preference number: 3 (lower is better)
Translates to: LERVCQPRCQPC*GSGLSRPFVVP
Trigger: GGGGACAACAAAGGGGCGGCTCAGTCCCGAGCCTCAGCATGGCTGGCAGCGCGGCTGACACACACGTTCAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CCA 72 bp TCTTGGGTGGCTCCTCCCTGGGAAGGGTCTCAGCAGTaGCTTGCAGACGTCTGCTGTGGGTCCCCAGGAGGG +
Preference number: 3 (lower is better)
Translates to: SWVAPPWEGSQQ*LADVCCGSPGG
Trigger: CCCTCCTGGGGACCCACAGCAGACGTCTGCAAGCCACTGCTGAGACCCTTCCCAGGGAGGAGCCACCCAAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CCA 72 bp TGGGGCCTTCTGGAAACACAGAGACCCTCGTGCACTTaGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGC +
Preference number: 3 (lower is better)
Translates to: WGLLETQRPSCT*PEPLAPTSRVG
Trigger: GCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGTTTCCAGAAGGCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR GCA 72 bp TTCCCCGGTTTCCCCAGGGCAGCTGTGGCACAAGAGTaGAGCTCTTGGGTGGCTCCTCCCTGGGAAGGGTCT +
Preference number: 3 (lower is better)
Translates to: FPGFPRAAVAQE*SSWVAPPWEGS
Trigger: AGACCCTTCCCAGGGAGGAGCCACCCAAGAGCTGCACTCTTGTGCCACAGCTGCCCTGGGGAAACCGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CAA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCACGGAGGCAGAGGTTCTaGATTTCTGAGTGTTTGGGT +
Preference number: 3 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAARRQRF*ISECLG
Trigger: ACCCAAACACTCAGAAATCAAGAACCTCTGCCTCCG...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR-3UTR CAA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGTTGATTTCTGAGTGTTaGGGTCCTGCGTGTGATCAG +
Preference number: 3 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQLISEC*GPACDQ
Trigger: CTGATCACACGCAGGACCCAAACACTCAGAAATCAA...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CCA 72 bp GTCATTTTATTAGTCACTGAACGCACGGGCAGCGCCTaGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGT +
Preference number: 3 (lower is better)
Translates to: VILLVTERTGSA*ILRPGSPGLER
Trigger: ACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCGTTCAGTGACTAATAAAATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR GCA 72 bp CCTGGGCATAGGGAGTCCTCTTGGCACCTTGGAGGCTaGATGATGGCGGGGGACCCTTGTTCAAATAAGATG +
Preference number: 3 (lower is better)
Translates to: PGHRESSWHLGG*MMAGDPCSNKM
Trigger: CATCTTATTTGAACAAGGGTCCCCCGCCATCATGCAGCCTCCAAGGTGCCAAGAGGACTCCCTATGCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR TCA 72 bp GGCATAGGGAGTCCTCTTGGCACCTTGGAGGCTGCATaGTGGCGGGGGACCCTTGTTCAAATAAGATGTCAA +
Preference number: 3 (lower is better)
Translates to: GIGSPLGTLEAA*WRGTLVQIRCQ
Trigger: TTGACATCTTATTTGAACAAGGGTCCCCCGCCATCATGCAGCCTCCAAGGTGCCAAGAGGACTCCCTATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCTCCCGCGGGCGGTACTaGCGCAGCCAGCGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: APGSCARAVLGLNVCVSRSRGRY*RSQRVA
Trigger: CGCCACGCGCTGGCTGCGTCAGTACCGCCCGCGGGA...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGGACGCAGACCCCGGGGTaGTGGGCGCTGCCGTCGGAC +
Preference number: 4 (lower is better)
Translates to: PTGCWSLSPPGGRRAGSGTQTPG*WALPSD
Trigger: GTCCGACGGCAGCGCCCAGCACCCCGGGGTCTGCGT...CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGCCACGTCGCACACGTTaGCCTGCCCGGCGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: RALGQSRWLLPAGWAPGRPRRTR*PARRRA
Trigger: TGCGCGGCGCCGGGCAGGCCAACGTGTGCGACGTGG...CCTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCGCACGGGCAGCGCCTaGATCCTGCGCCCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GAVPHRGIKQVRTHWLLERTGSA*ILRPGS
Trigger: ACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG...CTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCGGTGGCCGCGGTGCCTaGCCAGACCAGCGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVGGRGA*PDQRVS
Trigger: GCTGACGCGCTGGTCTGGGCAGGCACCGCGGCCACC...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCGTGGAAGCCGGCCGCTaGGGGCACCAGCGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVVEAGR*GHQRSP
Trigger: AGGGCTGCGCTGGTGCCCGCAGCGGCCGGCTTCCAC...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGTGGAAGCCGGCCGCTaGGGGCACCAGCGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: APGSCARAVLGLNVCVSRVEAGR*GHQRSP
Trigger: AGGGCTGCGCTGGTGCCCGCAGCGGCCGGCTTCCAC...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGAGGCGCGGAGGGCCCTaGGATGACGAGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RTGSAWILRPGSPGLERVRRGGP*DDEGLA
Trigger: TGCCAGCCCCTCGTCATCCCAGGGCCCTCCGCGCCT...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGGACGCAGCCAGCGCGTaGCGGGGAGCAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GAVPHRGIKQVRTHWLLEDAASA*RGAGPA
Trigger: TGCAGGACCTGCTCCCCGCCACGCGCTGGCTGCGTC...CTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGGGCTGCAGGCCGTCCTaGGAGGGGTCAAAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: GAVPHRGIKQVRTHWLLEGCRPS*EGSKPA
Trigger: GGCCGGCTTTGACCCCTCCCAGGACGGCCTGCAGCC...CTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGGCGGCGGGCAGGGTCTaGGCGTCCCAGAGCCCCTTA +
Preference number: 4 (lower is better)
Translates to: RTGSAWILRPGSPGLERVAAGRV*ASQSPL
Trigger: TAAGGGGCTCTGGGACGCCCAGACCCTGCCCGCCGC...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGCGCACGGGCAGCGCCTaGATCCTGCGCCCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQRTGSA*ILRPGS
Trigger: ACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp CCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGGGCACCACGGTGGCGCTaGCCACGCTGGACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PTGCWSLSPPGGRRAGSGAPRWR*PRWTAV
Trigger: CACAGCTGTCCAGCGTGGTCAGCGCCACCGTGGTGC...CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp GCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGGCCCGGCCTCTGTGCTaGCCAGCATACAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: AGPDPLAAGACHHQVGGGARPLC*PAYRWP
Trigger: CGGCCACCTGTATGCTGGTCAGCACAGAGGCCGGGC...CCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGGCGGGGCGCAGTCGATaGCCACTGTGTGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: RTGSAWILRPGSPGLERVAGRSR*PLCGSR
Trigger: CCGGCTTCCACACAGTGGTCATCGACTGCGCCCCGC...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCCAGCACCCTGGGCCCTaGCGCTGGTGCAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: APGSCARAVLGLNVCVSRQHPGP*RWCRWP
Trigger: TGGCCACCTGCACCAGCGTCAGGGCCCAGGGTGCTG...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGCTGTTGGCTCCGGGCTaGAGGCCGTCCTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQLLAPG*RPSWEG
Trigger: CCCCTCCCAGGACGGCCTGCAGCCCGGAGCCAACAG...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CTCCCGCCGAAGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTCGCACACGTTGGCCTaGCCGGCGCCGCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LPPKHPVGESVSLLAVLGSHTLA*PAPRSR
Trigger: CCTGCTGCGCGGCGCCGGGCAGGCCAACGTGTGCGA...CCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp AGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCTCGCACACGTTGGCCTaGCCGGCGCCGCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RPSCTWPEPLAPTSRVGTSHTLA*PAPRSR
Trigger: CCTGCTGCGCGGCGCCGGGCAGGCCAACGTGTGCGA...GGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGTACAGGTGGCCGCGGTaGCTGCCCAGACCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: RALGQSRWLLPAGWAPGRYRWPR*LPRPAR
Trigger: ACGCGCTGGTCTGGGCAGGCACCGCGGCCACCTGTA...CCTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CTCCCGCCGAAGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGAGGCCGTGTCCCCGATaGGGGCCAGCAGGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LPPKHPVGESVSLLAVLGRPCPR*GPAGRC
Trigger: GCACCGCCCTGCTGGCCCGCATCGGGGACACGGCCT...CCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGGTCCTCCTGGCAGCCATaGACCCTGCGTCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: PTGCWSLSPPGGRRAGSGSSWQP*TLRPAP
Trigger: CGGGGCTGGACGCAGGGTGCATGGCTGCCAGGAGGA...CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCACGGGGAGAGTGGGGGTaGTGGCGCCAACCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAARGEWG*WRQPAG
Trigger: GCCTGCAGGTTGGCGCCACCACCCCCACTCTCCCCG...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361661.6
CDS-3UTR CCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGGCTGCAGGCCGTCCTaGGAGGGGTCAAAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: APGSCARAVLGLNVCVSRGCRPS*EGSKPA
Trigger: GGCCGGCTTTGACCCCTCCCAGGACGGCCTGCAGCC...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCGGTGGCGACACGGATaGCGTAGCAGTCACGCCCGC +
Preference number: 4 (lower is better)
Translates to: AGPDPLAAGACHHQVGGGRWRHG*RSSHAR
Trigger: GCGGGCGTGACTGCTACGCCATCCGTGTCGCCACCG...CCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGGTGGCCAGGGCGGCGCTaGTGGCGAAGCAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PTGCWSLSPPGGRRAGSGWPGRR*WRSSGG
Trigger: TCCTCCACTGCTTCGCCACCAGCGCCGCCCTGGCCA...CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGCTGACTGGTCCCACGTaGGGCCTCGGGTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RTGSAWILRPGSPGLERVLTGPT*GLGSVL
Trigger: CAGGACAGACCCGAGGCCTCACGTGGGACCAGTCAG...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361661.6
CDS-3UTR TCA 90 bp GCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGTGGCAGCCGAGCCGTTaGGGGTGCTGCTGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: AGPDPLAAGACHHQVGGGWQPSR*GCCCWL
Trigger: GAGCCAACAGCAGCACCCTCAACGGCTCGGCTGCCA...CCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGGGCACACCGTGCTGGTaGCCACGTCGCACACGTTGG +
Preference number: 4 (lower is better)
Translates to: RTGSAWILRPGSPGLERVGTPCW*PRRTRW
Trigger: CCAACGTGTGCGACGTGGTCACCAGCACGGTGTGCC...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp CGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGGGCACACCGTGCTGGTaGCCACGTCGCACACGTTGG +
Preference number: 4 (lower is better)
Translates to: RALGQSRWLLPAGWAPGRGTPCW*PRRTRW
Trigger: CCAACGTGTGCGACGTGGTCACCAGCACGGTGTGCC...CCTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCCCGGCCTCTGTGCTaGCCAGCATACAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: APGSCARAVLGLNVCVSRARPLC*PAYRWP
Trigger: CGGCCACCTGTATGCTGGTCAGCACAGAGGCCGGGC...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGCCATCCCTCCTGAGCTaGGGGACGGTGCATTGGGGC +
Preference number: 4 (lower is better)
Translates to: RTGSAWILRPGSPGLERVPSLLS*GTVHWG
Trigger: GCCCCAATGCACCGTCCCTCAGCTCAGGAGGGATGG...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp CCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGGCCATCCCTCCTGAGCTaGGGGACGGTGCATTGGGGC +
Preference number: 4 (lower is better)
Translates to: PTGCWSLSPPGGRRAGSGPSLLS*GTVHWG
Trigger: GCCCCAATGCACCGTCCCTCAGCTCAGGAGGGATGG...CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCAACCGGCCCTCTGCCCTaGTGCAGAGGCTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAATGPLP*CRGSGD
Trigger: GTCCCCTGAGCCTCTGCAGCAGGGCAGAGGGCCGGT...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp AGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCAACGCAGACCCCGGGGTaGTGGGCGCTGCCGTCGGAC +
Preference number: 4 (lower is better)
Translates to: RDPRALGQSRWLLPAGWATQTPG*WALPSD
Trigger: GTCCGACGGCAGCGCCCAGCACCCCGGGGTCTGCGT...TGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGAGACATGACGTCGCCTaGCAGGTACTCCCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: RALGQSRWLLPAGWAPGRRHDVA*QVLPRA
Trigger: CGCCCGCGGGAGTACCTGGCAGGCGACGTCATGTCT...CCTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGAGACATGACGTCGCCTaGCAGGTACTCCCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: RTGSAWILRPGSPGLERVRHDVA*QVLPRA
Trigger: CGCCCGCGGGAGTACCTGGCAGGCGACGTCATGTCT...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGGTCGTGGAACAGCGGTaGCAGCGCCAGCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: RALGQSRWLLPAGWAPGRVVEQR*QRQQHQ
Trigger: CTGGTGCTGCTGGCGCTGGCACCGCTGTTCCACGAC...CCTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGTCCTCCTGGCAGCCATaGACCCTGCGTCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQSSWQP*TLRPAP
Trigger: CGGGGCTGGACGCAGGGTGCATGGCTGCCAGGAGGA...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGAGGCTCAGGGTTGGCTaGGCCGCACCTGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQRLRVG*AAPGSW
Trigger: CCAGGAGCCAGGTGCGGCGCAGCCAACCCTGAGCCT...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGGAGGGAGCCCCTaGATGGGGCACGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: APGSCARAVLGLNVCVSRAGGSP*MGHGGL
Trigger: AAGCCCACCGTGCCCCATGCAGGGGCTCCCTCCAGC...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGGGGAGGGCTGGGGGCTaGTCGGAAGACCCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: RTGSAWILRPGSPGLERVGRAGG*SEDPLF
Trigger: GAACAAGGGGTCTTCCGAGCAGCCCCCAGCCCTCCC...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CTCCCGCCGAAGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGAGGCGCGGAGGGCCCTaGGATGACGAGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LPPKHPVGESVSLLAVLGRRGGP*DDEGLA
Trigger: TGCCAGCCCCTCGTCATCCCAGGGCCCTCCGCGCCT...CCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCGGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGCGGTGGCGACACGGATaGCGTAGCAGTCACGCCCGC +
Preference number: 4 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQRWRHG*RSSHAR
Trigger: GCGGGCGTGACTGCTACGCCATCCGTGTCGCCACCG...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGGCTGCGAGGTCAGGATaGTCACGGAGGCCCCCATGG +
Preference number: 4 (lower is better)
Translates to: RTGSAWILRPGSPGLERVAARSG*SRRPPW
Trigger: CCATGGGGGCCTCCGTGACCATCCTGACCTCGCAGC...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGCCAGGGCGGCGCTGGTaGCGAAGCAGTGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQPGRRW*RSSGGR
Trigger: CCTTCCTCCACTGCTTCGCCACCAGCGCCGCCCTGG...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGTCGATGACCACTGTGTaGAAGCCGGCCGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: RALGQSRWLLPAGWAPGRSMTTV*KPAAAG
Trigger: GCCCGCAGCGGCCGGCTTCCACACAGTGGTCATCGA...CCTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTCGATGACCACTGTGTaGAAGCCGGCCGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: RTGSAWILRPGSPGLERVSMTTV*KPAAAG
Trigger: GCCCGCAGCGGCCGGCTTCCACACAGTGGTCATCGA...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGTCGGTCACAGCACCCTaGGCCCTGACGCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GAVPHRGIKQVRTHWLLESVTAP*ALTLVQ
Trigger: CTGCACCAGCGTCAGGGCCCAGGGTGCTGTGACCGA...CTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATCAGCCCGGCCAGCAATaGGTAGGCGATGGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: CARAVLGLNVCVSRAASHQPGQQ*VGDGLR
Trigger: CCGCAGGCCATCGCCTACTCATTGCTGGCCGGGCTG...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp AGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGCAGGCTCAGCCATGTaGGGACCACCATGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: RPSCTWPEPLAPTSRVGTAGSAM*GPPCRA
Trigger: GGCCCGGCATGGTGGTCCTCACATGGCTGAGCCTGC...GGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCAGTGTGGCCACCACGATaGCCAGCAGCTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAAVWPPR*PAAPWA
Trigger: TGCCCACGGAGCTGCTGGTCATCGTGGTGGCCACAC...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGGACCTGAGGGGGCATaGAACCCGTGGGGATGTCGC +
Preference number: 4 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQGPEGA*NPWGCR
Trigger: GCGACATCCCCACGGGTTTCATGCCCCCTCAGGTCC...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp CTCCCGCCGAAGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGGCACCACGGTGGCGCTaGCCACGCTGGACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LPPKHPVGESVSLLAVLGAPRWR*PRWTAV
Trigger: CACAGCTGTCCAGCGTGGTCAGCGCCACCGTGGTGC...CCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGCTGCGTCCAGCCCCGTaGGGCTGTAGAGTGACTGCA +
Preference number: 4 (lower is better)
Translates to: RTGSAWILRPGSPGLERVLRPAP*GCRVTA
Trigger: TGCAGTCACTCTACAGCCTCACGGGGCTGGACGCAG...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp CGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGCTGCGTCCAGCCCCGTaGGGCTGTAGAGTGACTGCA +
Preference number: 4 (lower is better)
Translates to: RALGQSRWLLPAGWAPGRLRPAP*GCRVTA
Trigger: TGCAGTCACTCTACAGCCTCACGGGGCTGGACGCAG...CCTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCGGGCAGTCCTGGGCTTaGACGTGTGTGTCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVGQSWA*TCVSAA
Trigger: CGCGGCTGACACACACGTTCAAGCCCAGGACTGCCC...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGAGGCGGGTAGCACGTTaGAGCAGCCCACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: AGPDPLAAGACHHQVGGGRRVAR*SSPQPA
Trigger: TGCTGGCTGTGGGCTGCTGCAACGTGCTACCCGCCT...CCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CTCCCGCCGAAGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGGGCAGCCATGCACCCTaGGTCCAGCCCCGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LPPKHPVGESVSLLAVLGGSHAP*VQPREA
Trigger: AGCCTCACGGGGCTGGACGCAGGGTGCATGGCTGCC...CCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCGGGAG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGGCAGGTCCTGCAGCGTaGTCACACCGGCTGCGTCTA +
Preference number: 4 (lower is better)
Translates to: AGPDPLAAGACHHQVGGGAGPAA*SHRLRL
Trigger: TAGACGCAGCCGGTGTGAGCACGCTGCAGGACCTGC...CCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCCTCTCACAGGCGGGCTaGAGCAGGCTAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: APGSCARAVLGLNVCVSRLSQAG*SRLAAG
Trigger: GCCTGCTGCTAGCCTGCTGCAGCCCGCCTGTGAGAG...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCGGGCAGGCCTGGCCCTaGTACAGATGGGCATCGGTG +
Preference number: 4 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVGQAWP*YRWASV
Trigger: CACCGATGCCCATCTGTAGCAGGGCCAGGCCTGCCC...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGGTGGCTTGCAGACGTCTaGTGTGGGTCCCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PTGCWSLSPPGGRRAGSGWLADV*CGSPGG
Trigger: CCCTCCTGGGGACCCACAGCAGACGTCTGCAAGCCA...CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGGCACCTGGCTCCTGGTaGACCCGTGAGCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: AGPDPLAAGACHHQVGGGAPGSW*TREHPC
Trigger: ACAGGGATGCTCACGGGTGCACCAGGAGCCAGGTGC...CCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGGGAGGGCTGGGGGCTaGTCGGAAGACCCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: APGSCARAVLGLNVCVSRGRAGG*SEDPLF
Trigger: GAACAAGGGGTCTTCCGAGCAGCCCCCAGCCCTCCC...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGGGATGACGAGGGGCTaGCAAGACCACCGAGGACCG +
Preference number: 4 (lower is better)
Translates to: APGSCARAVLGLNVCVSRGMTRG*QDHRGP
Trigger: CGGTCCTCGGTGGTCTTGCCAGCCCCTCGTCATCCC...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCTCAAAGCCGGCCAGCTaGAGCTCCCGGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: APGSCARAVLGLNVCVSRSKPAS*SSRSTT
Trigger: GGTGGTGGACCGGGAGCTCCAGCTGGCCGGCTTTGA...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTCCACGTCGCACACGTTaGCCTGCCCGGCGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCPRRTR*PARRRA
Trigger: TGCGCGGCGCCGGGCAGGCCAACGTGTGCGACGTGG...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCACACGCTGCATCAGCCTaGGCTCTGGGACCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAAHAASA*ALGPEG
Trigger: CCCCTCAGGTCCCAGAGCCCAGGCTGATGCAGCGTG...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGCACGCTGCATCAGCCTaGGCTCTGGGACCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQHAASA*ALGPEG
Trigger: CCCCTCAGGTCCCAGAGCCCAGGCTGATGCAGCGTG...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTCTCCGCCAGCGAGATaGAGAAGGCGGCAGCCACGA +
Preference number: 4 (lower is better)
Translates to: RTGSAWILRPGSPGLERVSPPAR*RRRQPR
Trigger: TCGTGGCTGCCGCCTTCTCCATCTCGCTGGCGGAGA...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGGCTGGTGGCGAAGCAGTaGAGGAAGGCGGGTAGCACG +
Preference number: 4 (lower is better)
Translates to: PTGCWSLSPPGGRRAGSGLVAKQ*RKAGST
Trigger: CGTGCTACCCGCCTTCCTCCACTGCTTCGCCACCAG...CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATGCCTCCAGCTCCCTGTaGCGGGCTCGTGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: CARAVLGLNVCVSRAASHASSSL*RARAVC
Trigger: GCAGACAGCACGAGCCCGCCACAGGGAGCTGGAGGC...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CTCCCGCCGAAGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGGCCTCCAGCTCCCTGTaGCGGGCTCGTGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LPPKHPVGESVSLLAVLGASSSL*RARAVC
Trigger: GCAGACAGCACGAGCCCGCCACAGGGAGCTGGAGGC...CCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGCTGCTGGGCAGGCCTaGCCCTGCTACAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQAAGQA*PCYRWA
Trigger: TGCCCATCTGTAGCAGGGCCAGGCCTGCCCAGCAGC...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGTGCAGACGTCTGCTGTaGGTCCCCAGGAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RALGQSRWLLPAGWAPGRCRRLL*VPRREQ
Trigger: CTGCTCCCTCCTGGGGACCCACAGCAGACGTCTGCA...CCTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCCTTGGCCAGAGCCGCTaGCTCCTACCAGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVLGQSR*LLPAGW
Trigger: CCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAG...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGAGACCCTCGTGCACTTaGCCAGAGCCGCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GAVPHRGIKQVRTHWLLERPSCT*PEPLAP
Trigger: AGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT...CTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CAA 72 bp GCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTaGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: ASSRSGPTGCWS*SPPGGRRAGSG
Trigger: CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
3UTR CAA 72 bp GCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTaGAACGTGTGTGTCAGCCGCGCTGCCAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: AAPGSCARAVLG*NVCVSRAASHA
Trigger: AGCATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp AGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCCGGTGCTTAGAGGCCTaGCTGGTCCCACGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: RPSCTWPEPLAPTSRVGTRCLEA*LVPREA
Trigger: GGCCTCACGTGGGACCAGTCAGGCCTCTAAGCACCG...GGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361661.6
CDS-3UTR TCA 90 bp AGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCAGCCGGAGGACGCCCATaGGGACCTGGTAAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: RDPRALGQSRWLLPAGWAAGGRP*GPGKAR
Trigger: CCGGGCTTTACCAGGTCCTCATGGGCGTCCTCCGGC...TGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATGGACCTGAGGGGGCATaGAACCCGTGGGGATGTCGC +
Preference number: 4 (lower is better)
Translates to: CARAVLGLNVCVSRAASHGPEGA*NPWGCR
Trigger: GCGACATCCCCACGGGTTTCATGCCCCCTCAGGTCC...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp CTCCCGCCGAAGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGAGGCTAGCAGCAGGCTaGTGCCCAGGGCCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: LPPKHPVGESVSLLAVLGRLAAG*CPGPRS
Trigger: ACTACGGGGCCCTGGGCATCAGCCTGCTGCTAGCCT...CCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGCAGGCCCATCCCTCCTaGGCTGAGGGACGGTGCATT +
Preference number: 4 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQQAHPS*AEGRCI
Trigger: AATGCACCGTCCCTCAGCTCAGGAGGGATGGGCCTG...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGACCTTGGAGGCTGCATaGTGGCGGGGGACCCTTGTT +
Preference number: 4 (lower is better)
Translates to: RTGSAWILRPGSPGLERVTLEAA*WRGTLV
Trigger: AACAAGGGTCCCCCGCCATCATGCAGCCTCCAAGGT...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp CTCCCGCCGAAGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGGGGAGGCACGAGGTGTaGGGGGCACTTGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LPPKHPVGESVSLLAVLGGRHEV*GALGCV
Trigger: CACACACCCAAGTGCCCCTCACACCTCGTGCCTCCC...CCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCGGGAG
68% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTCAGCACCCTGGGCCCTaGCGCTGGTGCAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCQHPGP*RWCRWP
Trigger: TGGCCACCTGCACCAGCGTCAGGGCCCAGGGTGCTG...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp GCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGACTGCACCTGAGGGCTaGGCTGAGGTCTCATCGGTC +
Preference number: 4 (lower is better)
Translates to: AGPDPLAAGACHHQVGGGTAPEG*AEVSSV
Trigger: GACCGATGAGACCTCAGCTCAGCCCTCAGGTGCAGT...CCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCATGGAGCTGCCCGAAGTaGGACACGAGTGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAAWSCPK*DTSVAT
Trigger: GGTGGCCACACTCGTGTCGCACTTCGGGCAGCTCCA...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGTCCAAAGCCACACGCTaGATCAGCCTGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RALGQSRWLLPAGWAPGRSKATR*ISLGSG
Trigger: CCCAGAGCCCAGGCTGATGCAGCGTGTGGCTTTGGA...CCTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATGTCGTGGAACAGCGGTaGCAGCGCCAGCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: CARAVLGLNVCVSRAASHVVEQR*QRQQHQ
Trigger: CTGGTGCTGCTGGCGCTGGCACCGCTGTTCCACGAC...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATTCTCGGCGCAGGTCCTaGAGCGTGCTCACACCGGCT +
Preference number: 4 (lower is better)
Translates to: CARAVLGLNVCVSRAASHSRRRS*SVLTPA
Trigger: AGCCGGTGTGAGCACGCTGCAGGACCTGCGCCGAGA...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCGGGAGAGCGTGTCCTTaGTGGCTGTGCTGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVGRACP*WLCWGE
Trigger: CTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCC...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGTCCGGACCCACTGGCTaGTGGAGCTTGTCACCACCA +
Preference number: 4 (lower is better)
Translates to: GAVPHRGIKQVRTHWLLESGPTG*WSLSPP
Trigger: TGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGA...CTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTGACGCAGCCAGCGCGTaGCGGGGAGCAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCDAASA*RGAGPA
Trigger: TGCAGGACCTGCTCCCCGCCACGCGCTGGCTGCGTC...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCTCTCCGCCAGCGAGATaGAGAAGGCGGCAGCCACGA +
Preference number: 4 (lower is better)
Translates to: APGSCARAVLGLNVCVSRSPPAR*RRRQPR
Trigger: TCGTGGCTGCCGCCTTCTCCATCTCGCTGGCGGAGA...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCCAGCAGCTCCTGGTTaGCACGCACAGAGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: GAVPHRGIKQVRTHWLLEPAAPG*HAQSSR
Trigger: ACGGCTACTCTGTGCGTGCCAACCAGGAGCTGCTGG...CTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCAGGGCGGCGCTGGTaGCGAAGCAGTGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: RDPRALGQSRWLLPAGWAPGRRW*RSSGGR
Trigger: CCTTCCTCCACTGCTTCGCCACCAGCGCCGCCCTGG...TGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCCTTCGCTGTAGGTCGTaGAACAGCGGTGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: APGSCARAVLGLNVCVSRLRCRS*NSGASA
Trigger: GGCGCTGGCACCGCTGTTCCACGACCTACAGCGAAG...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGGGCCCTCGAACTCTGTaGCATCCTCGTAGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: RTGSAWILRPGSPGLERVGPRTL*HPRRRP
Trigger: CGGCCTTCTACGAGGATGCCACAGAGTTCGAGGGCC...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATGCTGCTGGGCAGGCCTaGCCCTGCTACAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: CARAVLGLNVCVSRAASHAAGQA*PCYRWA
Trigger: TGCCCATCTGTAGCAGGGCCAGGCCTGCCCAGCAGC...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCCCTGTGTGTGTCTGCTaGCCAGGCTGGGTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVPVCVC*PGWVGP
Trigger: TGGCCCTACCCAGCCTGGCCAGCAGACACACACAGG...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGGCCGAAGCACCCTGTTaGGGAGAGCGTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: AGPDPLAAGACHHQVGGGAEAPC*GERVLA
Trigger: AGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGC...CCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGGGCCGAAGCACCCTGTTaGGGAGAGCGTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: PTGCWSLSPPGGRRAGSGAEAPC*GERVLA
Trigger: AGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGC...CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp ACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGCGGCGGGCAGGGTCTaGGCGTCCCAGAGCCCCTTA +
Preference number: 4 (lower is better)
Translates to: TQRPSCTWPEPLAPTSRVAAGRV*ASQSPL
Trigger: TAAGGGGCTCTGGGACGCCCAGACCCTGCCCGCCGC...CACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTCAGCCCGGCCAGCAATaGGTAGGCGATGGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCQPGQQ*VGDGLR
Trigger: CCGCAGGCCATCGCCTACTCATTGCTGGCCGGGCTG...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp AGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCAGTGTGGCCACCACGATaGCCAGCAGCTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RDPRALGQSRWLLPAGWAVWPPR*PAAPWA
Trigger: TGCCCACGGAGCTGCTGGTCATCGTGGTGGCCACAC...TGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp GCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGGCGGGGCGCAGTCGATaGCCACTGTGTGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: ASSRSGPTGCWSLSPPGGAGRSR*PLCGSR
Trigger: CCGGCTTCCACACAGTGGTCATCGACTGCGCCCCGC...CCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp AGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCAAGGCTAGCAGCAGGCTaGTGCCCAGGGCCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: RDPRALGQSRWLLPAGWARLAAG*CPGPRS
Trigger: ACTACGGGGCCCTGGGCATCAGCCTGCTGCTAGCCT...TGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp GTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTTCCCGTCCCGTGGCCGACCTaGGGGAGTCCTCACAGGCGC +
Preference number: 4 (lower is better)
Translates to: VLRVIRGPPFPVGVPRFPVPWPT*GSPHRR
Trigger: GCGCCTGTGAGGACTCCCTCAGGTCGGCCACGGGAC...GGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398516.3
CDS-3UTR GCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCACTCGTCCATCCTGTTaGGTCAGGTCCCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: APGSCARAVLGLNVCVSRTRPSC*VRSRGR
Trigger: TCGGCCACGGGACCTGACGCAACAGGATGGACGAGT...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCACACTGCACGAGCAGCTaGACCACAGCCTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAAHCTSS*TTAWPS
Trigger: TGAAGGCCAGGCTGTGGTGCAGCTGCTCGTGCAGTG...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATTCCCGGTCCACCACCTaGCCCACCATGAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: CARAVLGLNVCVSRAASHSRSTT*PTMRQS
Trigger: GCTTTGCCTCATGGTGGGGCAGGTGGTGGACCGGGA...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CTCCCGCCGAAGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGAGGCGGGTAGCACGTTaGAGCAGCCCACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPPKHPVGESVSLLAVLGRRVAR*SSPQPA
Trigger: TGCTGGCTGTGGGCTGCTGCAACGTGCTACCCGCCT...CCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTGGTGGCCGCGGTGCCTaGCCAGACCAGCGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: LGPACDQRASFPSWGSPVGGRGA*PDQRVS
Trigger: GCTGACGCGCTGGTCTGGGCAGGCACCGCGGCCACC...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp ACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGTACAGGTGGCCGCGGTaGCTGCCCAGACCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: TQRPSCTWPEPLAPTSRVYRWPR*LPRPAR
Trigger: ACGCGCTGGTCTGGGCAGGCACCGCGGCCACCTGTA...CACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp ACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCAGCCATGCACCCTaGGTCCAGCCCCGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: TQRPSCTWPEPLAPTSRVGSHAP*VQPREA
Trigger: AGCCTCACGGGGCTGGACGCAGGGTGCATGGCTGCC...CACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGACACTGAGGAACAGCTaGTCCTCCTCAGCCGTGTCC +
Preference number: 4 (lower is better)
Translates to: RALGQSRWLLPAGWAPGRTLRNS*SSSAVS
Trigger: GGACACGGCTGAGGAGGAGCAGCTGTTCCTCAGTGT...CCTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp AGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCTGTGGCGGGCTCGTaGTGTCTGCACGGCATCGTG +
Preference number: 4 (lower is better)
Translates to: RDPRALGQSRWLLPAGWAPVAGS*CLHGIV
Trigger: CACGATGCCGTGCAGACAGCACGAGCCCGCCACAGG...TGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGGCTGTGGCACAAGAGTaGAGCTCTTGGGTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RTGSAWILRPGSPGLERVAVAQE*SSWVAP
Trigger: AGGAGCCACCCAAGAGCTGCACTCTTGTGCCACAGC...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGACACAGAGACCCTCGTaGACTTGGCCAGAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQTQRPS*TWPEPL
Trigger: CAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp ACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGCTGGAGGGAGCCCCTaGATGGGGCACGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: TQRPSCTWPEPLAPTSRVAGGSP*MGHGGL
Trigger: AAGCCCACCGTGCCCCATGCAGGGGCTCCCTCCAGC...CACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCTCCGGACCCACTGGCTaGTGGAGCTTGTCACCACCA +
Preference number: 4 (lower is better)
Translates to: APGSCARAVLGLNVCVSRSGPTG*WSLSPP
Trigger: TGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGA...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCATCAAAGCCGGCCAGCTaGAGCTCCCGGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: RDPRALGQSRWLLPAGWASKPAS*SSRSTT
Trigger: GGTGGTGGACCGGGAGCTCCAGCTGGCCGGCTTTGA...TGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTACCATGCCGGGCCCCTaGTGCCGCGGGATCCGCACG +
Preference number: 4 (lower is better)
Translates to: LGPACDQRASFPSWGSPVTMPGP*CRGIRT
Trigger: CGTGCGGATCCCGCGGCACCAGGGGCCCGGCATGGT...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGAGCCAAAGCGCTTGTaGAGCTGCCCGAAGTGCGAC +
Preference number: 4 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQEPKRL*SCPKCD
Trigger: GTCGCACTTCGGGCAGCTCCACAAGCGCTTTGGCTC...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCACATCAGCCTGGGCTCTaGGACCTGAGGGGGCATGAA +
Preference number: 4 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAAHQPGL*DLRGHE
Trigger: TTCATGCCCCCTCAGGTCCCAGAGCCCAGGCTGATG...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CTCCCGCCGAAGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGCTGGTGGCGAAGCAGTaGAGGAAGGCGGGTAGCACG +
Preference number: 4 (lower is better)
Translates to: LPPKHPVGESVSLLAVLGLVAKQ*RKAGST
Trigger: CGTGCTACCCGCCTTCCTCCACTGCTTCGCCACCAG...CCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCTGGCCCTGCTACAGATaGGCATCGGTGGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RPSCTWPEPLAPTSRVGTWPCYR*ASVASS
Trigger: GCTGGAGGCCACCGATGCCCATCTGTAGCAGGGCCA...GGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATTGCAGACGTCTGCTGTaGGTCCCCAGGAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: CARAVLGLNVCVSRAASHCRRLL*VPRREQ
Trigger: CTGCTCCCTCCTGGGGACCCACAGCAGACGTCTGCA...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCAAGAGTGCAGCTCTTaGGTGGCTCCTCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GAVPHRGIKQVRTHWLLEQECSS*VAPPWE
Trigger: TTCCCAGGGAGGAGCCACCCAAGAGCTGCACTCTTG...CTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGCCTCCTTTCCCAGTTaGGGTTCCCCGGTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQASFPS*GSPVSP
Trigger: TGGGGAAACCGGGGAACCCCAACTGGGAAAGGAGGC...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCGCCTCCTTTCCCAGTTaGGGTTCCCCGGTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVASFPS*GSPVSP
Trigger: TGGGGAAACCGGGGAACCCCAACTGGGAAAGGAGGC...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCCCTGTGTGTGTCTGCTaGCCAGGCTGGGTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RPSCTWPEPLAPTSRVGTPVCVC*PGWVGP
Trigger: TGGCCCTACCCAGCCTGGCCAGCAGACACACACAGG...GGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTGAGGGAGCCCCTGCATaGGGCACGGTGGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCEGAPA*GTVGFL
Trigger: CAGGAAGCCCACCGTGCCCCATGCAGGGGCTCCCTC...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CTCCCGCCGAAGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGAGAGCGTGTCCTTGCTaGCTGTGCTGGGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LPPKHPVGESVSLLAVLGRACPC*LCWGEG
Trigger: GCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCT...CCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCAGAGCGTGTCCTTGCTaGCTGTGCTGGGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: RPSCTWPEPLAPTSRVGTRACPC*LCWGEG
Trigger: GCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCT...GGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTCTTGTCACCACCAGGTaGGCGGCGGGCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCLVTTR*AAGRVW
Trigger: CCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAG...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCGGACCCACTGGCTGCTaGAGCTTGTCACCACCAGGT +
Preference number: 4 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVGPTGC*SLSPPG
Trigger: ACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCC...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCCAGGTCCGGACCCACTaGCTGCTGGAGCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: RPSCTWPEPLAPTSRVGTQVRTH*LLELVT
Trigger: GGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTG...GGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCATCAACCTCGCCTATGTaGGCGCCGTCCCTCACCGCG +
Preference number: 4 (lower is better)
Translates to: RDPRALGQSRWLLPAGWASTSPM*APSLTA
Trigger: CGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGA...TGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp GCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCCCTGGAGCCTGGGCTaGGCCTGCTGTTTGCACGCT +
Preference number: 4 (lower is better)
Translates to: ASSRSGPTGCWSLSPPGGPWSLG*ACCLHA
Trigger: AGCGTGCAAACAGCAGGCTCAGCCCAGGCTCCAGGG...CCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361661.6
CDS-3UTR TCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGCACGGAGACATGCCGTaGGGTGCCCATGAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQHGDMP*GAHEEV
Trigger: TACTTCCTCATGGGCACCTCACGGCATGTCTCCGTG...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp GTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTTCCCGCCGGAGGACGCCCATaGGGACCTGGTAAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: VLRVIRGPPFPVGVPRFPAGGRP*GPGKAR
Trigger: CCGGGCTTTACCAGGTCCTCATGGGCGTCCTCCGGC...GGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp AGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACGCCCAGCAGGTGTTTaGGCTGCGAGGTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: RDPRALGQSRWLLPAGWARPAGV*AARSGW
Trigger: CCATCCTGACCTCGCAGCTCAAACACCTGCTGGGCG...TGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTGCTGAGGCTCGGGACTaGGCCGCCCCTTTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCAEARD*AAPLLS
Trigger: GGACAACAAAGGGGCGGCTCAGTCCCGAGCCTCAGC...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp GCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGGCTGAGGCTCGGGACTaGGCCGCCCCTTTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: ASSRSGPTGCWSLSPPGGAEARD*AAPLLS
Trigger: GGACAACAAAGGGGCGGCTCAGTCCCGAGCCTCAGC...CCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTGGGCAGTCCTGGGCTTaGACGTGTGTGTCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCGQSWA*TCVSAA
Trigger: CGCGGCTGACACACACGTTCAAGCCCAGGACTGCCC...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTTCCCACCGGCCCTCTGCCCTaGTGCAGAGGCTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: VLRVIRGPPFPVGVPRFPTGPLP*CRGSGD
Trigger: GTCCCCTGAGCCTCTGCAGCAGGGCAGAGGGCCGGT...GGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp AGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCCACTGCACGAGCAGCTaGACCACAGCCTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RPSCTWPEPLAPTSRVGTHCTSS*TTAWPS
Trigger: TGAAGGCCAGGCTGTGGTGCAGCTGCTCGTGCAGTG...GGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTCTGTTGGCTCCGGGCTaGAGGCCGTCCTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LGPACDQRASFPSWGSPVLLAPG*RPSWEG
Trigger: CCCCTCCCAGGACGGCCTGCAGCCCGGAGCCAACAG...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCAAAGCGCTTGTGGAGCTaGCCGAAGTGCGACACGAGT +
Preference number: 4 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAAKRLWS*PKCDTS
Trigger: ACTCGTGTCGCACTTCGGGCAGCTCCACAAGCGCTT...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp ACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGTCTCGGCGCAGGTCCTaGAGCGTGCTCACACCGGCT +
Preference number: 4 (lower is better)
Translates to: TQRPSCTWPEPLAPTSRVSRRRS*SVLTPA
Trigger: AGCCGGTGTGAGCACGCTGCAGGACCTGCGCCGAGA...CACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp ACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGCTCTCACAGGCGGGCTaGAGCAGGCTAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TQRPSCTWPEPLAPTSRVLSQAG*SRLAAG
Trigger: GCCTGCTGCTAGCCTGCTGCAGCCCGCCTGTGAGAG...CACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGGGGCAGGCCTGGCCCTaGTACAGATGGGCATCGGTG +
Preference number: 4 (lower is better)
Translates to: ASSRSGPTGCWSLSPPGGGQAWP*YRWASV
Trigger: CACCGATGCCCATCTGTAGCAGGGCCAGGCCTGCCC...CCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGTGGCACAAGAGTaGAGCTCTTGGGTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: APGSCARAVLGLNVCVSRAVAQE*SSWVAP
Trigger: AGGAGCCACCCAAGAGCTGCACTCTTGTGCCACAGC...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTTCCCAGGCTCAGGGTTGGCTaGGCCGCACCTGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VLRVIRGPPFPVGVPRFPRLRVG*AAPGSW
Trigger: CCAGGAGCCAGGTGCGGCGCAGCCAACCCTGAGCCT...GGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGGGAGAGTGGGGGTGGTaGCGCCAACCTGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: ASSRSGPTGCWSLSPPGGGEWGW*RQPAGS
Trigger: ACTGCCTGCAGGTTGGCGCCACCACCCCCACTCTCC...CCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361661.6
CDS-3UTR CCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTGGGATGACGAGGGGCTaGCAAGACCACCGAGGACCG +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCGMTRG*QDHRGP
Trigger: CGGTCCTCGGTGGTCTTGCCAGCCCCTCGTCATCCC...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCTTGCGTCAGGTCCCGTaGCCGACCTTTCCCTTGATC +
Preference number: 4 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVLRQVP*PTFPLI
Trigger: GATCAAGGGAAAGGTCGGCCACGGGACCTGACGCAA...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361661.6
CDS-3UTR CCA 90 bp GCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCTATAGAGGCTGTAGATaGGCTGCAGCCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: APGSCARAVLGLNVCVSRYRGCR*AAARPA
Trigger: TGCTGGCCGGGCTGCAGCCCATCTACAGCCTCTATA...GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp ACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGCTGCGAGGTCAGGATaGTCACGGAGGCCCCCATGG +
Preference number: 4 (lower is better)
Translates to: TQRPSCTWPEPLAPTSRVAARSG*SRRPPW
Trigger: CCATGGGGGCCTCCGTGACCATCCTGACCTCGCAGC...CACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATGAGCCAAAGCGCTTGTaGAGCTGCCCGAAGTGCGAC +
Preference number: 4 (lower is better)
Translates to: CARAVLGLNVCVSRAASHEPKRL*SCPKCD
Trigger: GTCGCACTTCGGGCAGCTCCACAAGCGCTTTGGCTC...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTTCCCTGGCCAGGGCGGCGCTaGTGGCGAAGCAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VLRVIRGPPFPVGVPRFPWPGRR*WRSSGG
Trigger: TCCTCCACTGCTTCGCCACCAGCGCCGCCCTGGCCA...GGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GGCGCCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGGAAGGGTCTCAGCAGTaGCTTGCAGACGTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GAVPHRGIKQVRTHWLLEEGSQQ*LADVCC
Trigger: ACAGCAGACGTCTGCAAGCCACTGCTGAGACCCTTC...CTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGCCGCGGTGAGGGACGGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGGGCACTTGGGTGTGTaGGGCCTTCTGGAAACACAG +
Preference number: 4 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQGHLGV*GLLETQ
Trigger: CTGTGTTTCCAGAAGGCCCCACACACCCAAGTGCCC...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTTCCCGCCGCACCTGGCTCCTaGTGCACCCGTGAGCATCCC +
Preference number: 4 (lower is better)
Translates to: VLRVIRGPPFPVGVPRFPAAPGS*CTREHP
Trigger: GGGATGCTCACGGGTGCACCAGGAGCCAGGTGCGGC...GGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTTCCCGAGGGAGCCCCTGCATaGGGCACGGTGGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VLRVIRGPPFPVGVPRFPEGAPA*GTVGFL
Trigger: CAGGAAGCCCACCGTGCCCCATGCAGGGGCTCCCTC...GGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGGTGAGGGCTGTGTGCTaGAGGGAGCCCCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: ASSRSGPTGCWSLSPPGGVRAVC*REPLHG
Trigger: CCCATGCAGGGGCTCCCTCCAGCACACAGCCCTCAC...CCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTTCCCCTTGTCACCACCAGGTaGGCGGCGGGCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VLRVIRGPPFPVGVPRFPLVTTR*AAGRVW
Trigger: CCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAG...GGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp ACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGTCAACCTCGCCTATGTaGGCGCCGTCCCTCACCGCG +
Preference number: 4 (lower is better)
Translates to: TQRPSCTWPEPLAPTSRVSTSPM*APSLTA
Trigger: CGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGA...CACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp CTCCCGCCGAAGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGATCGAGCAGTGGCTGTaGGAGGTAGGCGGACACGAA +
Preference number: 4 (lower is better)
Translates to: LPPKHPVGESVSLLAVLGIEQWL*EVGGHE
Trigger: TTCGTGTCCGCCTACCTCTCACAGCCACTGCTCGAT...CCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp GCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGCCCAGCAGGTGTTTaGGCTGCGAGGTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: ASSRSGPTGCWSLSPPGGRPAGV*AARSGW
Trigger: CCATCCTGACCTCGCAGCTCAAACACCTGCTGGGCG...CCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATTTTGGGTCCTGCGTGTaGTCAGAGGGCCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: CARAVLGLNVCVSRAASHFGSCV*SEGLLS
Trigger: GGAAAGGAGGCCCTCTGATCACACGCAGGACCCAAA...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp GCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGGCCACACAGCCAGGCTaGCCAGTACGTCCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: ASSRSGPTGCWSLSPPGGATQPG*PVRPQL
Trigger: CAGCTGAGGACGTACTGGTCAGCCTGGCTGTGTGGC...CCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCAGGTGTTTGAGCTaGGAGGTCAGGATGGTCACG +
Preference number: 4 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVSRCLS*EVRMVT
Trigger: CGTGACCATCCTGACCTCGCAGCTCAAACACCTGCT...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGCGAGGAAGCCTCCTCTaGTCAGAATGTCTCTCACAG +
Preference number: 4 (lower is better)
Translates to: RALGQSRWLLPAGWAPGRRGSLL*SECLSQ
Trigger: CTGTGAGAGACATTCTGAGCAGAGGAGGCTTCCTCG...CCTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATACACTGAGGAACAGCTaGTCCTCCTCAGCCGTGTCC +
Preference number: 4 (lower is better)
Translates to: CARAVLGLNVCVSRAASHTLRNS*SSSAVS
Trigger: GGACACGGCTGAGGAGGAGCAGCTGTTCCTCAGTGT...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTTGGCACCTTGGAGGCTaGATGATGGCGGGGGACCCT +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCWHLGG*MMAGDP
Trigger: AGGGTCCCCCGCCATCATGCAGCCTCCAAGGTGCCA...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATTATAGAGGCTGTAGATaGGCTGCAGCCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: CARAVLGLNVCVSRAASHYRGCR*AAARPA
Trigger: TGCTGGCCGGGCTGCAGCCCATCTACAGCCTCTATA...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTCTTCGCTGTAGGTCGTaGAACAGCGGTGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCLRCRS*NSGASA
Trigger: GGCGCTGGCACCGCTGTTCCACGACCTACAGCGAAG...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCAGGCCCTCGAACTCTGTaGCATCCTCGTAGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: RDPRALGQSRWLLPAGWAGPRTL*HPRRRP
Trigger: CGGCCTTCTACGAGGATGCCACAGAGTTCGAGGGCC...TGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTACAGATGGGCATCGGTaGCCTCCAGCTCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCTDGHR*PPAPCG
Trigger: GCCACAGGGAGCTGGAGGCCACCGATGCCCATCTGT...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGACAGATGGGCATCGGTaGCCTCCAGCTCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: ASSRSGPTGCWSLSPPGGTDGHR*PPAPCG
Trigger: GCCACAGGGAGCTGGAGGCCACCGATGCCCATCTGT...CCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTTGGCCCTGCTACAGATaGGCATCGGTGGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCWPCYR*ASVASS
Trigger: GCTGGAGGCCACCGATGCCCATCTGTAGCAGGGCCA...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTAGACCCTCGTGCACTTaGCCAGAGCCGCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCRPSCT*PEPLAP
Trigger: AGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp ACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGTGTGAGGGGCACTTaGGTGTGTGGGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TQRPSCTWPEPLAPTSRVGVRGT*VCGAFW
Trigger: CCAGAAGGCCCCACACACCCAAGTGCCCCTCACACC...CACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTGCCGCACCTGGCTCCTaGTGCACCCGTGAGCATCCC +
Preference number: 4 (lower is better)
Translates to: LGPACDQRASFPSWGSPVAAPGS*CTREHP
Trigger: GGGATGCTCACGGGTGCACCAGGAGCCAGGTGCGGC...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTTCCCGTGAGGGCTGTGTGCTaGAGGGAGCCCCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: VLRVIRGPPFPVGVPRFPVRAVC*REPLHG
Trigger: CCCATGCAGGGGCTCCCTCCAGCACACAGCCCTCAC...GGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp AGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACACGGAGACATGCCGTaGGGTGCCCATGAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: RDPRALGQSRWLLPAGWAHGDMP*GAHEEV
Trigger: TACTTCCTCATGGGCACCTCACGGCATGTCTCCGTG...TGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp AATTTGGAGGACGCTTGCTCAGGCTTCTCTCCTCTGCAGGCTGGCCAGGTTGAGGCCCGGTCATCAGCGTaGGGGCGGTGGCGACACGGA +
Preference number: 4 (lower is better)
Translates to: NLEDACSGFSPLQAGQVEARSSA*GRWRHG
Trigger: TCCGTGTCGCCACCGCCCTCACGCTGATGACCGGGC...CTCAACCTGGCCAGCCTGCAGAGGAGAGAAGCCTGAGCAAGCGTCCTCCAAATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR TCA 90 bp CGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGGGAGGCAGAGGTTCTTaGTTTCTGAGTGTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: RALGQSRWLLPAGWAPGRGGRGS*FLSVWV
Trigger: GACCCAAACACTCAGAAATCAAGAACCTCTGCCTCC...CCTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCATAAGATGTCAACCCTaGGCGTCAGGTCAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVIRCQP*ASGQAH
Trigger: ATGGGCCTGACCTGACGCTCAGGGTTGACATCTTAT...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTGGGAGGCACGAGGTGTaGGGGGCACTTGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LGPACDQRASFPSWGSPVGRHEV*GALGCV
Trigger: CACACACCCAAGTGCCCCTCACACCTCGTGCCTCCC...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGCATTTTATTAGTCACTaGACGCACGGGCAGCGCCTG +
Preference number: 4 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQHFISH*THGQRL
Trigger: CAGGCGCTGCCCGTGCGTTCAGTGACTAATAAAATG...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCACATTTTATTAGTCACTaGACGCACGGGCAGCGCCTG +
Preference number: 4 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAAHFISH*THGQRL
Trigger: CAGGCGCTGCCCGTGCGTTCAGTGACTAATAAAATG...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCAGTTAGGCAAAGACTTTaGTCCCAGGACACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAAVRQRL*SQDTRC
Trigger: GCACCTGGTGTCCTGGGAGCAAAGTCTTTGCCTAAC...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361661.6
CDS-3UTR GCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTACTCGTCCATCCTGTTaGGTCAGGTCCCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCTRPSC*VRSRGR
Trigger: TCGGCCACGGGACCTGACGCAACAGGATGGACGAGT...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGATGCCCACGGAGACATaGCGTGAGGTGCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: ASSRSGPTGCWSLSPPGGMPTET*REVPMR
Trigger: CCTCATGGGCACCTCACGGCATGTCTCCGTGGGCAT...CCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTCCTGTGGCGGGCTCGTaGTGTCTGCACGGCATCGTG +
Preference number: 4 (lower is better)
Translates to: LGPACDQRASFPSWGSPVPVAGS*CLHGIV
Trigger: CACGATGCCGTGCAGACAGCACGAGCCCGCCACAGG...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTTCCCTGGCACCTTGGAGGCTaGATGATGGCGGGGGACCCT +
Preference number: 4 (lower is better)
Translates to: VLRVIRGPPFPVGVPRFPWHLGG*MMAGDP
Trigger: AGGGTCCCCCGCCATCATGCAGCCTCCAAGGTGCCA...GGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AATTTGGAGGACGCTTGCTCAGGCTTCTCTCCTCTGCAGGCTGGCCAGGTTGAGGGCTGCAGGCCGTCCTaGGAGGGGTCAAAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: NLEDACSGFSPLQAGQVEGCRPS*EGSKPA
Trigger: GGCCGGCTTTGACCCCTCCCAGGACGGCCTGCAGCC...CTCAACCTGGCCAGCCTGCAGAGGAGAGAAGCCTGAGCAAGCGTCCTCCAAATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR CCA 90 bp ACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGTCACGGAGGCCCCCATaGCAAAGCCATCGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: TQRPSCTWPEPLAPTSRVSRRPP*QSHRAV
Trigger: CACTGCTCGATGGCTTTGCCATGGGGGCCTCCGTGA...CACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTTCACGGAGGCCCCCATaGCAAAGCCATCGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCSRRPP*QSHRAV
Trigger: CACTGCTCGATGGCTTTGCCATGGGGGCCTCCGTGA...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp ACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGCCAGCAGCTCCTGGTTaGCACGCACAGAGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: TQRPSCTWPEPLAPTSRVPAAPG*HAQSSR
Trigger: ACGGCTACTCTGTGCGTGCCAACCAGGAGCTGCTGG...CACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CTCCCGCCGAAGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGGGAAGAAGTCCTTGTTaGCATAGTACAGCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LPPKHPVGESVSLLAVLGGRSPC*HSTAAP
Trigger: GGGGGCCGCTGTACTATGCCAACAAGGACTTCTTCC...CCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCGGGAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTCTTGGCCAGAGCCGCTaGCTCCTACCAGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGPACDQRASFPSWGSPVLGQSR*LLPAGW
Trigger: CCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAG...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTTCCCCAGGTCCGGACCCACTaGCTGCTGGAGCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: VLRVIRGPPFPVGVPRFPQVRTH*LLELVT
Trigger: GGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTG...GGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp ACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCCGACCTTTCCCTTaGTCTCGGAAAACACCGTGG +
Preference number: 4 (lower is better)
Translates to: TQRPSCTWPEPLAPTSRVGRPFP*SRKTPW
Trigger: CCACGGTGTTTTCCGAGATCAAGGGAAAGGTCGGCC...CACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361661.6
CDS-3UTR TCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTTTTGGGTCCTGCGTGTaGTCAGAGGGCCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCFGSCV*SEGLLS
Trigger: GGAAAGGAGGCCCTCTGATCACACGCAGGACCCAAA...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp TCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGGGCAGGGAGGCAGAGGTTCTTaGTTTCTGAGTGTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: SCTWPEPLAPTSRVGTGQGGRGS*FLSVWV
Trigger: GACCCAAACACTCAGAAATCAAGAACCTCTGCCTCC...CTGCCCGGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTCAGGCCCATCCCTCCTaGGCTGAGGGACGGTGCATT +
Preference number: 4 (lower is better)
Translates to: LGPACDQRASFPSWGSPVQAHPS*AEGRCI
Trigger: AATGCACCGTCCCTCAGCTCAGGAGGGATGGGCCTG...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp GTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTTCCCACTGCACCTGAGGGCTaGGCTGAGGTCTCATCGGTC +
Preference number: 4 (lower is better)
Translates to: VLRVIRGPPFPVGVPRFPTAPEG*AEVSSV
Trigger: GACCGATGAGACCTCAGCTCAGCCCTCAGGTGCAGT...GGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGCGGGTCTGTCCTGTTTaGAGACTCCAATGTACTTTC +
Preference number: 4 (lower is better)
Translates to: RTGSAWILRPGSPGLERVRVCPV*RLQCTF
Trigger: GAAAGTACATTGGAGTCTGCAAACAGGACAGACCCG...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361661.6
CDS-3UTR GCA 90 bp TGTTGTGAAATTTGGAGGACGCTTGCTCAGGCTTCTCTCCTCTGCAGGCTGGCCCTGTTGGCTCCGGGCTaGAGGCCGTCCTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CCEIWRTLAQASLLCRLALLAPG*RPSWEG
Trigger: CCCCTCCCAGGACGGCCTGCAGCCCGGAGCCAACAG...GGCCAGCCTGCAGAGGAGAGAAGCCTGAGCAAGCGTCCTCCAAATTTCACAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR GCA 90 bp AGGCAGAGGTTCTTGATTTCTGAGTGTTTGGGTCCTGCGTGTGATCAGAGGGCCAGGCCGTGTCCCCGATaGGGGCCAGCAGGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: RQRFLISECLGPACDQRARPCPR*GPAGRC
Trigger: GCACCGCCCTGCTGGCCCGCATCGGGGACACGGCCT...GGCCCTCTGATCACACGCAGGACCCAAACACTCAGAAATCAAGAACCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTTCCCACACAGAGACCCTCGTaGACTTGGCCAGAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: VLRVIRGPPFPVGVPRFPTQRPS*TWPEPL
Trigger: CAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT...GGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTGCACCTGGCTCCTGGTaGACCCGTGAGCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: LGPACDQRASFPSWGSPVAPGSW*TREHPC
Trigger: ACAGGGATGCTCACGGGTGCACCAGGAGCCAGGTGC...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTGGGAGAGCGTGTCCTTaGTGGCTGTGCTGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LGPACDQRASFPSWGSPVGRACP*WLCWGE
Trigger: CTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCC...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CCCCAGGTGCTGATCCAAGCCTCCCTCTGGAATAAGCTGTATCCACCGGCTTCTCGGTGGCGACACGGATaGCGTAGCAGTCACGCCCGC +
Preference number: 4 (lower is better)
Translates to: PQVLIQASLWNKLYPPASRWRHG*RSSHAR
Trigger: GCGGGCGTGACTGCTACGCCATCCGTGTCGCCACCG...AGAAGCCGGTGGATACAGCTTATTCCAGAGGGAGGCTTGGATCAGCACCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR CCA 90 bp AGGCAGAGGTTCTTGATTTCTGAGTGTTTGGGTCCTGCGTGTGATCAGAGGGCCACCATGCCGGGCCCCTaGTGCCGCGGGATCCGCACG +
Preference number: 4 (lower is better)
Translates to: RQRFLISECLGPACDQRATMPGP*CRGIRT
Trigger: CGTGCGGATCCCGCGGCACCAGGGGCCCGGCATGGT...GGCCCTCTGATCACACGCAGGACCCAAACACTCAGAAATCAAGAACCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTTCCCCATCAGCCTGGGCTCTaGGACCTGAGGGGGCATGAA +
Preference number: 4 (lower is better)
Translates to: VLRVIRGPPFPVGVPRFPHQPGL*DLRGHE
Trigger: TTCATGCCCCCTCAGGTCCCAGAGCCCAGGCTGATG...GGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTGGTGTGAGGGGCACTTaGGTGTGTGGGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LGPACDQRASFPSWGSPVGVRGT*VCGAFW
Trigger: CCAGAAGGCCCCACACACCCAAGTGCCCCTCACACC...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp TGTTGTGAAATTTGGAGGACGCTTGCTCAGGCTTCTCTCCTCTGCAGGCTGGCCCAGCCCGGCCAGCAATaGGTAGGCGATGGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: CCEIWRTLAQASLLCRLAQPGQQ*VGDGLR
Trigger: CCGCAGGCCATCGCCTACTCATTGCTGGCCGGGCTG...GGCCAGCCTGCAGAGGAGAGAAGCCTGAGCAAGCGTCCTCCAAATTTCACAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR TCA 90 bp GTGAAATTTGGAGGACGCTTGCTCAGGCTTCTCTCCTCTGCAGGCTGGCCAGGTTGGCAGCCGAGCCGTTaGGGGTGCTGCTGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: VKFGGRLLRLLSSAGWPGWQPSR*GCCCWL
Trigger: GAGCCAACAGCAGCACCCTCAACGGCTCGGCTGCCA...ACCTGGCCAGCCTGCAGAGGAGAGAAGCCTGAGCAAGCGTCCTCCAAATTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR TCA 90 bp AGGCAGAGGTTCTTGATTTCTGAGTGTTTGGGTCCTGCGTGTGATCAGAGGGCCGCCCGGTCATCAGCGTaGGGGCGGTGGCGACACGGA +
Preference number: 4 (lower is better)
Translates to: RQRFLISECLGPACDQRAARSSA*GRWRHG
Trigger: TCCGTGTCGCCACCGCCCTCACGCTGATGACCGGGC...GGCCCTCTGATCACACGCAGGACCCAAACACTCAGAAATCAAGAACCTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATGAGGTTCTTGATTTCTaGGTGTTTGGGTCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: CARAVLGLNVCVSRAASHEVLDF*VFGSCV
Trigger: CACGCAGGACCCAAACACTCAGAAATCAAGAACCTC...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTAGCAGGTGTTTGAGCTaGGAGGTCAGGATGGTCACG +
Preference number: 4 (lower is better)
Translates to: STLLGRACPCWLCWGEGCSRCLS*EVRMVT
Trigger: CGTGACCATCCTGACCTCGCAGCTCAAACACCTGCT...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTTCCCAAGCGCTTGTGGAGCTaGCCGAAGTGCGACACGAGT +
Preference number: 4 (lower is better)
Translates to: VLRVIRGPPFPVGVPRFPKRLWS*PKCDTS
Trigger: ACTCGTGTCGCACTTCGGGCAGCTCCACAAGCGCTT...GGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTCAGAGTAGCCGTGACTaGGGGCGAACATCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: LGPACDQRASFPSWGSPVQSSRD*GRTSPP
Trigger: TGGCGGAGATGTTCGCCCGCAGTCACGGCTACTCTG...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp TGTGAAATTTGGAGGACGCTTGCTCAGGCTTCTCTCCTCTGCAGGCTGGCCAGGGGGATGACGAGGGGCTaGCAAGACCACCGAGGACCG +
Preference number: 4 (lower is better)
Translates to: CEIWRTLAQASLLCRLARGMTRG*QDHRGP
Trigger: CGGTCCTCGGTGGTCTTGCCAGCCCCTCGTCATCCC...CCTGGCCAGCCTGCAGAGGAGAGAAGCCTGAGCAAGCGTCCTCCAAATTTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR CCA 90 bp GTGAAATTTGGAGGACGCTTGCTCAGGCTTCTCTCCTCTGCAGGCTGGCCAGGTTCAAAGCCGGCCAGCTaGAGCTCCCGGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: VKFGGRLLRLLSSAGWPGSKPAS*SSRSTT
Trigger: GGTGGTGGACCGGGAGCTCCAGCTGGCCGGCTTTGA...ACCTGGCCAGCCTGCAGAGGAGAGAAGCCTGAGCAAGCGTCCTCCAAATTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR CCA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTGTCCTCTTGGCACCTTaGAGGCTGCATGATGGCGGG +
Preference number: 4 (lower is better)
Translates to: LGPACDQRASFPSWGSPVVLLAP*RLHDGG
Trigger: CCCGCCATCATGCAGCCTCCAAGGTGCCAAGAGGAC...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTATCGAGCAGTGGCTGTaGGAGGTAGGCGGACACGAA +
Preference number: 4 (lower is better)
Translates to: LGPACDQRASFPSWGSPVIEQWL*EVGGHE
Trigger: TTCGTGTCCGCCTACCTCTCACAGCCACTGCTCGAT...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp GCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGATAAGATGTCAACCCTaGGCGTCAGGTCAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: ASSRSGPTGCWSLSPPGGIRCQP*ASGQAH
Trigger: ATGGGCCTGACCTGACGCTCAGGGTTGACATCTTAT...CCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp GTGAAATTTGGAGGACGCTTGCTCAGGCTTCTCTCCTCTGCAGGCTGGCCAGGTTCCCGGTCCACCACCTaGCCCACCATGAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: VKFGGRLLRLLSSAGWPGSRSTT*PTMRQS
Trigger: GCTTTGCCTCATGGTGGGGCAGGTGGTGGACCGGGA...ACCTGGCCAGCCTGCAGAGGAGAGAAGCCTGAGCAAGCGTCCTCCAAATTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR TCA 90 bp AGGCAGAGGTTCTTGATTTCTGAGTGTTTGGGTCCTGCGTGTGATCAGAGGGCCTGGCAGCCGAGCCGTTaGGGGTGCTGCTGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: RQRFLISECLGPACDQRAWQPSR*GCCCWL
Trigger: GAGCCAACAGCAGCACCCTCAACGGCTCGGCTGCCA...GGCCCTCTGATCACACGCAGGACCCAAACACTCAGAAATCAAGAACCTCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp GAGGAAAGAGGAAGACGAAAGGTAATCCTCAGGCCCACTAGCATGGCTGGTTTTGTCCCGTGGCCGACCTaGGGGAGTCCTCACAGGCGC +
Preference number: 4 (lower is better)
Translates to: EERGRRKVILRPTSMAGFVPWPT*GSPHRR
Trigger: GCGCCTGTGAGGACTCCCTCAGGTCGGCCACGGGAC...AAAACCAGCCATGCTAGTGGGCCTGAGGATTACCTTTCGTCTTCCTCTTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR GCA 90 bp ACAGAGGAAAGAGGAAGACGAAAGGTAATCCTCAGGCCCACTAGCATGGCTGGTACCGGCCCTCTGCCCTaGTGCAGAGGCTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: TEERGRRKVILRPTSMAGTGPLP*CRGSGD
Trigger: GTCCCCTGAGCCTCTGCAGCAGGGCAGAGGGCCGGT...ACCAGCCATGCTAGTGGGCCTGAGGATTACCTTTCGTCTTCCTCTTTCCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR GCA 90 bp AATTTGGAGGACGCTTGCTCAGGCTTCTCTCCTCTGCAGGCTGGCCAGGTTGAGATGCCCACGGAGACATaGCGTGAGGTGCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: NLEDACSGFSPLQAGQVEMPTET*REVPMR
Trigger: CCTCATGGGCACCTCACGGCATGTCTCCGTGGGCAT...CTCAACCTGGCCAGCCTGCAGAGGAGAGAAGCCTGAGCAAGCGTCCTCCAAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR CCA 90 bp AGGCAGAGGTTCTTGATTTCTGAGTGTTTGGGTCCTGCGTGTGATCAGAGGGCCTCGGTCACAGCACCCTaGGCCCTGACGCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RQRFLISECLGPACDQRASVTAP*ALTLVQ
Trigger: CTGCACCAGCGTCAGGGCCCAGGGTGCTGTGACCGA...GGCCCTCTGATCACACGCAGGACCCAAACACTCAGAAATCAAGAACCTCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR TCA 90 bp AATTTGGAGGACGCTTGCTCAGGCTTCTCTCCTCTGCAGGCTGGCCAGGTTGAGCACGGAGACATGCCGTaGGGTGCCCATGAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: NLEDACSGFSPLQAGQVEHGDMP*GAHEEV
Trigger: TACTTCCTCATGGGCACCTCACGGCATGTCTCCGTG...CTCAACCTGGCCAGCCTGCAGAGGAGAGAAGCCTGAGCAAGCGTCCTCCAAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR TCA 90 bp AGGCAGAGGTTCTTGATTTCTGAGTGTTTGGGTCCTGCGTGTGATCAGAGGGCCGCCACACAGCCAGGCTaGCCAGTACGTCCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RQRFLISECLGPACDQRAATQPG*PVRPQL
Trigger: CAGCTGAGGACGTACTGGTCAGCCTGGCTGTGTGGC...GGCCCTCTGATCACACGCAGGACCCAAACACTCAGAAATCAAGAACCTCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp AGGCAGAGGTTCTTGATTTCTGAGTGTTTGGGTCCTGCGTGTGATCAGAGGGCCTGGAGCTGCCCGAAGTaGGACACGAGTGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: RQRFLISECLGPACDQRAWSCPK*DTSVAT
Trigger: GGTGGCCACACTCGTGTCGCACTTCGGGCAGCTCCA...GGCCCTCTGATCACACGCAGGACCCAAACACTCAGAAATCAAGAACCTCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp AGGCAGAGGTTCTTGATTTCTGAGTGTTTGGGTCCTGCGTGTGATCAGAGGGCCGCAGGTCCTGCAGCGTaGTCACACCGGCTGCGTCTA +
Preference number: 4 (lower is better)
Translates to: RQRFLISECLGPACDQRAAGPAA*SHRLRL
Trigger: TAGACGCAGCCGGTGTGAGCACGCTGCAGGACCTGC...GGCCCTCTGATCACACGCAGGACCCAAACACTCAGAAATCAAGAACCTCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp AGGCAGAGGTTCTTGATTTCTGAGTGTTTGGGTCCTGCGTGTGATCAGAGGGCCCGGGCTCGTGCTGTCTaGACGGCATCGTGCACACTG +
Preference number: 4 (lower is better)
Translates to: RQRFLISECLGPACDQRARARAV*TASCTL
Trigger: CAGTGTGCACGATGCCGTGCAGACAGCACGAGCCCG...GGCCCTCTGATCACACGCAGGACCCAAACACTCAGAAATCAAGAACCTCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp AGGCAGAGGTTCTTGATTTCTGAGTGTTTGGGTCCTGCGTGTGATCAGAGGGCCTGGCTTGCAGACGTCTaGTGTGGGTCCCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: RQRFLISECLGPACDQRAWLADV*CGSPGG
Trigger: CCCTCCTGGGGACCCACAGCAGACGTCTGCAAGCCA...GGCCCTCTGATCACACGCAGGACCCAAACACTCAGAAATCAAGAACCTCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp AGGCAGAGGTTCTTGATTTCTGAGTGTTTGGGTCCTGCGTGTGATCAGAGGGCCGGACACCCTGGAGCCTaGGCTGAGCCTGCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: RQRFLISECLGPACDQRAGHPGA*AEPAVC
Trigger: GCAAACAGCAGGCTCAGCCCAGGCTCCAGGGTGTCC...GGCCCTCTGATCACACGCAGGACCCAAACACTCAGAAATCAAGAACCTCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361661.6
CDS-3UTR TCA 90 bp GTGAAATTTGGAGGACGCTTGCTCAGGCTTCTCTCCTCTGCAGGCTGGCCAGGTTTTTTCCCCAGGTGCTaGTCCAAGCCTCCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: VKFGGRLLRLLSSAGWPGFFPRC*SKPPSG
Trigger: TCCAGAGGGAGGCTTGGATCAGCACCTGGGGAAAAA...ACCTGGCCAGCCTGCAGAGGAGAGAAGCCTGAGCAAGCGTCCTCCAAATTTCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR GCA 90 bp AGGCAGAGGTTCTTGATTTCTGAGTGTTTGGGTCCTGCGTGTGATCAGAGGGCCATGCCCACGGAGACATaGCGTGAGGTGCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: RQRFLISECLGPACDQRAMPTET*REVPMR
Trigger: CCTCATGGGCACCTCACGGCATGTCTCCGTGGGCAT...GGCCCTCTGATCACACGCAGGACCCAAACACTCAGAAATCAAGAACCTCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR GCA 90 bp AGGCAGAGGTTCTTGATTTCTGAGTGTTTGGGTCCTGCGTGTGATCAGAGGGCCTCCAAAGCCACACGCTaGATCAGCCTGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RQRFLISECLGPACDQRASKATR*ISLGSG
Trigger: CCCAGAGCCCAGGCTGATGCAGCGTGTGGCTTTGGA...GGCCCTCTGATCACACGCAGGACCCAAACACTCAGAAATCAAGAACCTCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp CCCCAGGTGCTGATCCAAGCCTCCCTCTGGAATAAGCTGTATCCACCGGCTTCTTGCCATGGGTGTTGCTaGAAGCTGTTTCTACCCCAG +
Preference number: 4 (lower is better)
Translates to: PQVLIQASLWNKLYPPASCHGCC*KLFLPQ
Trigger: CTGGGGTAGAAACAGCTTCCAGCAACACCCATGGCA...AGAAGCCGGTGGATACAGCTTATTCCAGAGGGAGGCTTGGATCAGCACCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR GCA 90 bp GCTTTACAGAAATGTACTGATGACTGGTTACATCATCCACATGGTAAAGCCTGTACGCAGACCCCGGGGTaGTGGGCGCTGCCGTCGGAC +
Preference number: 4 (lower is better)
Translates to: ALQKCTDDWLHHPHGKACTQTPG*WALPSD
Trigger: GTCCGACGGCAGCGCCCAGCACCCCGGGGTCTGCGT...ACAGGCTTTACCATGTGGATGATGTAACCAGTCATCAGTACATTTCTGTAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR CCA 90 bp ACAGAGGAAAGAGGAAGACGAAAGGTAATCCTCAGGCCCACTAGCATGGCTGGTTATAGAGGCTGTAGATaGGCTGCAGCCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TEERGRRKVILRPTSMAGYRGCR*AAARPA
Trigger: TGCTGGCCGGGCTGCAGCCCATCTACAGCCTCTATA...ACCAGCCATGCTAGTGGGCCTGAGGATTACCTTTCGTCTTCCTCTTTCCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR CCA 90 bp AGGCAGAGGTTCTTGATTTCTGAGTGTTTGGGTCCTGCGTGTGATCAGAGGGCCGGAAGAAGTCCTTGTTaGCATAGTACAGCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: RQRFLISECLGPACDQRAGRSPC*HSTAAP
Trigger: GGGGGCCGCTGTACTATGCCAACAAGGACTTCTTCC...GGCCCTCTGATCACACGCAGGACCCAAACACTCAGAAATCAAGAACCTCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CCA 90 bp GCTTTACAGAAATGTACTGATGACTGGTTACATCATCCACATGGTAAAGCCTGTAGGCGCGGAGGGCCCTaGGATGACGAGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: ALQKCTDDWLHHPHGKACRRGGP*DDEGLA
Trigger: TGCCAGCCCCTCGTCATCCCAGGGCCCTCCGCGCCT...ACAGGCTTTACCATGTGGATGATGTAACCAGTCATCAGTACATTTCTGTAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR CCA 90 bp GCTTTACAGAAATGTACTGATGACTGGTTACATCATCCACATGGTAAAGCCTGTGACGCAGCCAGCGCGTaGCGGGGAGCAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ALQKCTDDWLHHPHGKACDAASA*RGAGPA
Trigger: TGCAGGACCTGCTCCCCGCCACGCGCTGGCTGCGTC...ACAGGCTTTACCATGTGGATGATGTAACCAGTCATCAGTACATTTCTGTAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR GCA 90 bp CTTTACAGAAATGTACTGATGACTGGTTACATCATCCACATGGTAAAGCCTGTTAGACATGACGTCGCCTaGCAGGTACTCCCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LYRNVLMTGYIIHMVKPVRHDVA*QVLPRA
Trigger: CGCCCGCGGGAGTACCTGGCAGGCGACGTCATGTCT...AACAGGCTTTACCATGTGGATGATGTAACCAGTCATCAGTACATTTCTGTAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR GCA 90 bp TCCACAGAGGAAAGAGGAAGACGAAAGGTAATCCTCAGGCCCACTAGCATGGCTAATTGCCATGGGTGTTaGTGGAAGCTGTTTCTACCC +
Preference number: 4 (lower is better)
Translates to: STEERGRRKVILRPTSMANCHGC*WKLFLP
Trigger: GGGTAGAAACAGCTTCCAGCAACACCCATGGCAATT...AGCCATGCTAGTGGGCCTGAGGATTACCTTTCGTCTTCCTCTTTCCTCTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR GCA 90 bp GCTTTACAGAAATGTACTGATGACTGGTTACATCATCCACATGGTAAAGCCTGTCACTGCACGAGCAGCTaGACCACAGCCTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: ALQKCTDDWLHHPHGKACHCTSS*TTAWPS
Trigger: TGAAGGCCAGGCTGTGGTGCAGCTGCTCGTGCAGTG...ACAGGCTTTACCATGTGGATGATGTAACCAGTCATCAGTACATTTCTGTAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR GCA 90 bp CTTTACAGAAATGTACTGATGACTGGTTACATCATCCACATGGTAAAGCCTGTTACTCGTCCATCCTGTTaGGTCAGGTCCCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: LYRNVLMTGYIIHMVKPVTRPSC*VRSRGR
Trigger: TCGGCCACGGGACCTGACGCAACAGGATGGACGAGT...AACAGGCTTTACCATGTGGATGATGTAACCAGTCATCAGTACATTTCTGTAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR GCA 90 bp CTTTACAGAAATGTACTGATGACTGGTTACATCATCCACATGGTAAAGCCTGTTCTCCTCTGTGTTAATTaGCATGGGTGTTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LYRNVLMTGYIIHMVKPVLLCVN*HGCCWK
Trigger: CTTCCAGCAACACCCATGGCAATTAACACAGAGGAG...AACAGGCTTTACCATGTGGATGATGTAACCAGTCATCAGTACATTTCTGTAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR CCA 90 bp TTGCTTTACAGAAATGTACTGATGACTGGTTACATCATCCACATGGTAAAGCCTTCAGGCCCACTAGCATaGCTGGTTTTTAAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: LLYRNVLMTGYIIHMVKPSGPLA*LVFKSV
Trigger: CACACTTTTAAAAACCAGCCATGCTAGTGGGCCTGA...AGGCTTTACCATGTGGATGATGTAACCAGTCATCAGTACATTTCTGTAAAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS TCA 90 bp CGCACACGTTGGCCTGCCCGGCGCCGCGCAGCAGGCTCAGCCATGTaGGGACCACCATGCCGGGCCCCTGGTGCCGCGGGATCCGCACGC +
Preference number: 5 (lower is better)
Translates to: RTRWPARRRAAGSAM*GPPCRAPGAAGSAR
Trigger: GCGTGCGGATCCCGCGGCACCAGGGGCCCGGCATGGTGGTCCTCACATGGCTGAGCCTGCTGCGCGGCGCCGGGCAGGCCAACGTGTGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CCA 90 bp CGCCTGCCAGGTACTCCCGCGGGCGGTACTGACGCAGCCAGCGCGTaGCGGGGAGCAGGTCCTGCACCAGCGCCCGGACGCACAGCACAC +
Preference number: 5 (lower is better)
Translates to: RLPGTPAGGTDAASA*RGAGPAPAPGRTAH
Trigger: GTGTGCTGTGCGTCCGGGCGCTGGTGCAGGACCTGCTCCCCGCCACGCGCTGGCTGCGTCAGTACCGCCCGCGGGAGTACCTGGCAGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS GCA 90 bp CAGCCCGGCCTCTGTGCTGACCAGCATACAGGTGGCCGCGGTGCCTaGCCAGACCAGCGCGTCAGCCGGGCTCATCCGCCACAGCCGCGG +
Preference number: 5 (lower is better)
Translates to: QPGLCADQHTGGRGA*PDQRVSRAHPPQPR
Trigger: CCGCGGCTGTGGCGGATGAGCCCGGCTGACGCGCTGGTCTGGGCAGGCACCGCGGCCACCTGTATGCTGGTCAGCACAGAGGCCGGGCTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCACCACGTCGCACACGTaGGCCTGCCCGGCGCCGCGC +
Preference number: 5 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVTTSHT*ACPAPR
Trigger: GCGCGGCGCCGGGCAGGCCAACGTGTGCGACGTGGT...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS TCA 90 bp AGCCCAGACATGACGTCGCCTGCCAGGTACTCCCGCGGGCGGTACTaGCGCAGCCAGCGCGTGGCGGGGAGCAGGTCCTGCACCAGCGCC +
Preference number: 5 (lower is better)
Translates to: SPDMTSPARYSRGRY*RSQRVAGSRSCTSA
Trigger: GGCGCTGGTGCAGGACCTGCTCCCCGCCACGCGCTGGCTGCGTCAGTACCGCCCGCGGGAGTACCTGGCAGGCGACGTCATGTCTGGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS TCA 90 bp AGAGCTCCTTCGCGGCTAGCAGCACCGCCAGGCACACCGTGCTGGTaGCCACGTCGCACACGTTGGCCTGCCCGGCGCCGCGCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: RAPSRLAAPPGTPCW*PRRTRWPARRRAAG
Trigger: GCCTGCTGCGCGGCGCCGGGCAGGCCAACGTGTGCGACGTGGTCACCAGCACGGTGTGCCTGGCGGTGCTGCTAGCCGCGAAGGAGCTCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS GCA 90 bp GGTGCTGGGCGCTGCCGTCGGACCGGCACCGGCCCTCTGCCCTGCTaGAGAGGCTCAGGGGACTCGTCCATCCTGTTGCGTCAGGTCCCG +
Preference number: 5 (lower is better)
Translates to: GAGRCRRTGTGPLPC*RGSGDSSILLRQVP
Trigger: CGGGACCTGACGCAACAGGATGGACGAGTCCCCTGAGCCTCTGCAGCAGGGCAGAGGGCCGGTGCCGGTCCGACGGCAGCGCCCAGCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS GCA 90 bp CGGGGTGCTGGGCGCTGCCGTCGGACCGGCACCGGCCCTCTGCCCTaGTGCAGAGGCTCAGGGGACTCGTCCATCCTGTTGCGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: RGAGRCRRTGTGPLP*CRGSGDSSILLRQV
Trigger: GACCTGACGCAACAGGATGGACGAGTCCCCTGAGCCTCTGCAGCAGGGCAGAGGGCCGGTGCCGGTCCGACGGCAGCGCCCAGCACCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS GCA 90 bp AGCCTGGCCTTCAGCATCTCACGCAGACCCCGGGGTGCTGGGCGCTaGCGTCGGACCGGCACCGGCCCTCTGCCCTGCTGCAGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: SLAFSISRRPRGAGR*RRTGTGPLPCCRGS
Trigger: TGAGCCTCTGCAGCAGGGCAGAGGGCCGGTGCCGGTCCGACGGCAGCGCCCAGCACCCCGGGGTCTGCGTGAGATGCTGAAGGCCAGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS GCA 90 bp CAGCAGCGGGGCGCAGTCGATGACCACTGTGTGGAAGCCGGCCGCTaGGGGCACCAGCGCAGCCCTGGTGCTAACCGGGCCCAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: QQRGAVDDHCVEAGR*GHQRSPGANRAQVL
Trigger: GAGGACCTGGGCCCGGTTAGCACCAGGGCTGCGCTGGTGCCCGCAGCGGCCGGCTTCCACACAGTGGTCATCGACTGCGCCCCGCTGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CCA 90 bp CTCGTAGAAGGCCGTGTCCCCGATGCGGGCCAGCAGGGCGGTGCGTaGGCGTTGGGTGCGGCCGGCCAGGCTGAGCAGCGAGAGGATGAC +
Preference number: 5 (lower is better)
Translates to: LVEGRVPDAGQQGGA*ALGAAGQAEQREDD
Trigger: GTCATCCTCTCGCTGCTCAGCCTGGCCGGCCGCACCCAACGCCCACGCACCGCCCTGCTGGCCCGCATCGGGGACACGGCCTTCTACGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CCA 90 bp GCTCCGGGCTGCAGGCCGTCCTGGGAGGGGTCAAAGCCGGCCAGCTaGAGCTCCCGGTCCACCACCTGCCCCACCATGAGGCAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: APGCRPSWEGSKPAS*SSRSTTCPTMRQSR
Trigger: CCTGCTTTGCCTCATGGTGGGGCAGGTGGTGGACCGGGAGCTCCAGCTGGCCGGCTTTGACCCCTCCCAGGACGGCCTGCAGCCCGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS CCA 90 bp GAGCCGTTGAGGGTGCTGCTGTTGGCTCCGGGCTGCAGGCCGTCCTaGGAGGGGTCAAAGCCGGCCAGCTGGAGCTCCCGGTCCACCACC +
Preference number: 5 (lower is better)
Translates to: EPLRVLLLAPGCRPS*EGSKPASWSSRSTT
Trigger: GGTGGTGGACCGGGAGCTCCAGCTGGCCGGCTTTGACCCCTCCCAGGACGGCCTGCAGCCCGGAGCCAACAGCAGCACCCTCAACGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS CCA 90 bp CCGCGCAGCAGGCTCAGCCATGTGAGGACCACCATGCCGGGCCCCTaGTGCCGCGGGATCCGCACGCCCAGCAGGTGTTTGAGCTGCGAG +
Preference number: 5 (lower is better)
Translates to: PRSRLSHVRTTMPGP*CRGIRTPSRCLSCE
Trigger: CTCGCAGCTCAAACACCTGCTGGGCGTGCGGATCCCGCGGCACCAGGGGCCCGGCATGGTGGTCCTCACATGGCTGAGCCTGCTGCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp GCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGGTCTTCACCAGGCTCTaGGCCAGGGCGGCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: AGPDPLAAGACHHQVGGGVFTRL*ARAALV
Trigger: CACCAGCGCCGCCCTGGCCAAGAGCCTGGTGAAGAC...CCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp CCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGGGAGACCCTCGTGCACTaGGCCAGAGCCGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: PTGCWSLSPPGGRRAGSGETLVH*ARAAGS
Trigger: GGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTC...CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp CCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGGTGCTCGGAAGACCCCTaGTTCCCCCACCTCCCGCCG +
Preference number: 5 (lower is better)
Translates to: PTGCWSLSPPGGRRAGSGCSEDP*FPHLPP
Trigger: CGGCGGGAGGTGGGGGAACAAGGGGTCTTCCGAGCA...CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS TCA 90 bp TGGCGTAGCAGTCACGCCCGCAGTCCAGCATGGCAGCCGAGCCGTTaGGGGTGCTGCTGTTGGCTCCGGGCTGCAGGCCGTCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: WRSSHARSPAWQPSR*GCCCWLRAAGRPGR
Trigger: CCTCCCAGGACGGCCTGCAGCCCGGAGCCAACAGCAGCACCCTCAACGGCTCGGCTGCCATGCTGGACTGCGGGCGTGACTGCTACGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS TCA 90 bp TGCCGGGCCCCTGGTGCCGCGGGATCCGCACGCCCAGCAGGTGTTTaGGCTGCGAGGTCAGGATGGTCACGGAGGCCCCCATGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: CRAPGAAGSARPAGV*AARSGWSRRPPWQS
Trigger: GCTTTGCCATGGGGGCCTCCGTGACCATCCTGACCTCGCAGCTCAAACACCTGCTGGGCGTGCGGATCCCGCGGCACCAGGGGCCCGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS TCA 90 bp TGCTCACACCGGCTGCGTCTAGGAACAGCAGCGGGGCGCAGTCGATaGCCACTGTGTGGAAGCCGGCCGCTGCGGGCACCAGCGCAGCCC +
Preference number: 5 (lower is better)
Translates to: CSHRLRLGTAAGRSR*PLCGSRPLRAPAQP
Trigger: GGGCTGCGCTGGTGCCCGCAGCGGCCGGCTTCCACACAGTGGTCATCGACTGCGCCCCGCTGCTGTTCCTAGACGCAGCCGGTGTGAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS TCA 90 bp GCTCCCTGTGGCGGGCTCGTGCTGTCTGCACGGCATCGTGCACACTaGGGAACAGCTGCTCCTCCTCAGCCGTGTCCCCGGGGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: APCGGLVLSARHRAH*GTAAPPQPCPRGPP
Trigger: GGGAGGGCCCCGGGGACACGGCTGAGGAGGAGCAGCTGTTCCTCAGTGTGCACGATGCCGTGCAGACAGCACGAGCCCGCCACAGGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS GCA 90 bp AGCATGGCAGCCGAGCCGTTGAGGGTGCTGCTGTTGGCTCCGGGCTaGAGGCCGTCCTGGGAGGGGTCAAAGCCGGCCAGCTGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SMAAEPLRVLLLAPG*RPSWEGSKPASWSS
Trigger: GGAGCTCCAGCTGGCCGGCTTTGACCCCTCCCAGGACGGCCTGCAGCCCGGAGCCAACAGCAGCACCCTCAACGGCTCGGCTGCCATGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS GCA 90 bp CGCAGCAGGCTCAGCCATGTGAGGACCACCATGCCGGGCCCCTGGTaGCGCGGGATCCGCACGCCCAGCAGGTGTTTGAGCTGCGAGGTC +
Preference number: 5 (lower is better)
Translates to: RSRLSHVRTTMPGPW*RGIRTPSRCLSCEV
Trigger: GACCTCGCAGCTCAAACACCTGCTGGGCGTGCGGATCCCGCGGCACCAGGGGCCCGGCATGGTGGTCCTCACATGGCTGAGCCTGCTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS GCA 90 bp ACCGCCAGGCACACCGTGCTGGTGACCACGTCGCACACGTTGGCCTaGCCGGCGCCGCGCAGCAGGCTCAGCCATGTGAGGACCACCATG +
Preference number: 5 (lower is better)
Translates to: TARHTVLVTTSHTLA*PAPRSRLSHVRTTM
Trigger: CATGGTGGTCCTCACATGGCTGAGCCTGCTGCGCGGCGCCGGGCAGGCCAACGTGTGCGACGTGGTCACCAGCACGGTGTGCCTGGCGGT
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CCA 90 bp GGAACACCCGCACGCCGGGCTCAGGGACGAGGCCCTCGAACTCTGTaGCATCCTCGTAGAAGGCCGTGTCCCCGATGCGGGCCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: GTPARRAQGRGPRTL*HPRRRPCPRCGPAG
Trigger: CCCTGCTGGCCCGCATCGGGGACACGGCCTTCTACGAGGATGCCACAGAGTTCGAGGGCCTCGTCCCTGAGCCCGGCGTGCGGGTGTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCGTCTTCACCAGGCTCTaGGCCAGGGCGGCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVVFTRL*ARAALV
Trigger: CACCAGCGCCGCCCTGGCCAAGAGCCTGGTGAAGAC...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp CCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCAGGGTCTGGGGGCCTCCTTTCCCAGTaGGGGTTCCCCGGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: PTGCWSLSPPGGRRAGSGGLLSQ*GFPGFP
Trigger: GGGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCC...CCCAGACCCTGCCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp GCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGACTGGCTGCTGGAGCTaGTCACCACCAGGTGGGCGG +
Preference number: 5 (lower is better)
Translates to: AGPDPLAAGACHHQVGGGTGCWS*SPPGGR
Trigger: CCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGT...CCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp GCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGCGGCGGGCGGGCAGTCCTGGGCTaGAACGTGTGTGTCAGCCGC +
Preference number: 5 (lower is better)
Translates to: AGPDPLAAGACHHQVGGGRAVLG*NVCVSR
Trigger: GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCG...CCCGCCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS GCA 90 bp CGGCACCAGGATGATGCCGATGACCAGCCCAGACATGACGTCGCCTaGCAGGTACTCCCGCGGGCGGTACTGACGCAGCCAGCGCGTGGC +
Preference number: 5 (lower is better)
Translates to: RHQDDADDQPRHDVA*QVLPRAVLTQPARG
Trigger: GCCACGCGCTGGCTGCGTCAGTACCGCCCGCGGGAGTACCTGGCAGGCGACGTCATGTCTGGGCTGGTCATCGGCATCATCCTGGTGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS GCA 90 bp GGCCCCTGGTGCCGCGGGATCCGCACGCCCAGCAGGTGTTTGAGCTaGGAGGTCAGGATGGTCACGGAGGCCCCCATGGCAAAGCCATCG +
Preference number: 5 (lower is better)
Translates to: GPWCRGIRTPSRCLS*EVRMVTEAPMAKPS
Trigger: CGATGGCTTTGCCATGGGGGCCTCCGTGACCATCCTGACCTCGCAGCTCAAACACCTGCTGGGCGTGCGGATCCCGCGGCACCAGGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CCA 90 bp GCTGCGTCTAGGAACAGCAGCGGGGCGCAGTCGATGACCACTGTGTaGAAGCCGGCCGCTGCGGGCACCAGCGCAGCCCTGGTGCTAACC +
Preference number: 5 (lower is better)
Translates to: AASRNSSGAQSMTTV*KPAAAGTSAALVLT
Trigger: GGTTAGCACCAGGGCTGCGCTGGTGCCCGCAGCGGCCGGCTTCCACACAGTGGTCATCGACTGCGCCCCGCTGCTGTTCCTAGACGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGATGGCAGCCGAGCCGTaGAGGGTGCTGCTGTTGGCT +
Preference number: 5 (lower is better)
Translates to: RTGSAWILRPGSPGLERVMAAEP*RVLLLA
Trigger: AGCCAACAGCAGCACCCTCAACGGCTCGGCTGCCAT...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAAGGCGGGTAGCACGTaGCAGCAGCCCACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVKAGST*QQPTAS
Trigger: GCTGGCTGTGGGCTGCTGCAACGTGCTACCCGCCTT...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCAAAGGCGGGTAGCACGTaGCAGCAGCCCACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAAKAGST*QQPTAS
Trigger: GCTGGCTGTGGGCTGCTGCAACGTGCTACCCGCCTT...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATTGCTCGGAAGACCCCTaGTTCCCCCACCTCCCGCCG +
Preference number: 5 (lower is better)
Translates to: CARAVLGLNVCVSRAASHCSEDP*FPHLPP
Trigger: CGGCGGGAGGTGGGGGAACAAGGGGTCTTCCGAGCA...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp CGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCCGGGCAGTCCTGGGCTaGAACGTGTGTGTCAGCCGC +
Preference number: 5 (lower is better)
Translates to: RAAPGSCARAVLGLNVCVRAVLG*NVCVSR
Trigger: GCGGCTGACACACACGTTCAAGCCCAGGACTGCCCG...GACACACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS TCA 90 bp GCTTGTGGAGCTGCCCGAAGTGCGACACGAGTGTGGCCACCACGATaGCCAGCAGCTCCGTGGGCAGCGGCACCCTCAGGCGGTGTCGGT +
Preference number: 5 (lower is better)
Translates to: ACGAARSATRVWPPR*PAAPWAAAPSGGVG
Trigger: ACCGACACCGCCTGAGGGTGCCGCTGCCCACGGAGCTGCTGGTCATCGTGGTGGCCACACTCGTGTCGCACTTCGGGCAGCTCCACAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS GCA 90 bp TGGCGGGGAGCAGGTCCTGCACCAGCGCCCGGACGCACAGCACACTaGACGAGCAGCTGCACCACAGCCTGGCCTTCAGCATCTCACGCA +
Preference number: 5 (lower is better)
Translates to: WRGAGPAPAPGRTAH*TSSCTTAWPSASHA
Trigger: TGCGTGAGATGCTGAAGGCCAGGCTGTGGTGCAGCTGCTCGTGCAGTGTGCTGTGCGTCCGGGCGCTGGTGCAGGACCTGCTCCCCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS GCA 90 bp GGGCGGCGCTGGTGGCGAAGCAGTGGAGGAAGGCGGGTAGCACGTTaGAGCAGCCCACAGCCAGCAGCTCCTGGTTGGCACGCACAGAGT +
Preference number: 5 (lower is better)
Translates to: GRRWWRSSGGRRVAR*SSPQPAAPGWHAQS
Trigger: ACTCTGTGCGTGCCAACCAGGAGCTGCTGGCTGTGGGCTGCTGCAACGTGCTACCCGCCTTCCTCCACTGCTTCGCCACCAGCGCCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CCA 90 bp GTCTTCACCAGGCTCTTGGCCAGGGCGGCGCTGGTGGCGAAGCAGTaGAGGAAGGCGGGTAGCACGTTGCAGCAGCCCACAGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VFTRLLARAALVAKQ*RKAGSTLQQPTASS
Trigger: GCTGCTGGCTGTGGGCTGCTGCAACGTGCTACCCGCCTTCCTCCACTGCTTCGCCACCAGCGCCGCCCTGGCCAAGAGCCTGGTGAAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp AGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCGACTCGTCCATCCTGTaGCGTCAGGTCCCGTGGCCG +
Preference number: 5 (lower is better)
Translates to: RPSCTWPEPLAPTSRVGTDSSIL*RQVPWP
Trigger: CGGCCACGGGACCTGACGCAACAGGATGGACGAGTC...GGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGACGCCCAGCAGGTGTTaGAGCTGCGAGGTCAGGATG +
Preference number: 5 (lower is better)
Translates to: RTGSAWILRPGSPGLERVTPSRC*SCEVRM
Trigger: CATCCTGACCTCGCAGCTCAAACACCTGCTGGGCGT...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTACCACGTCGCACACGTaGGCCTGCCCGGCGCCGCGC +
Preference number: 5 (lower is better)
Translates to: LGPACDQRASFPSWGSPVTTSHT*ACPAPR
Trigger: GCGCGGCGCCGGGCAGGCCAACGTGTGCGACGTGGT...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATCGCCGAAGCACCCTGTaGGGGAGAGCGTGTCCTTGC +
Preference number: 5 (lower is better)
Translates to: CARAVLGLNVCVSRAASHRRSTL*GRACPC
Trigger: GCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCG...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp AGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCACTGGCTGCTGGAGCTaGTCACCACCAGGTGGGCGG +
Preference number: 5 (lower is better)
Translates to: RPSCTWPEPLAPTSRVGTTGCWS*SPPGGR
Trigger: CCGCCCACCTGGTGGTGACAAGCTCCAGCAGCCAGT...GGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS TCA 90 bp TCAGAATGTCTCTCACAGGCGGGCTGCAGCAGGCTAGCAGCAGGCTaGTGCCCAGGGCCCCGTAGTCTCGGCGCAGGTCCTGCAGCGTGC +
Preference number: 5 (lower is better)
Translates to: SECLSQAGCSRLAAG*CPGPRSLGAGPAAC
Trigger: GCACGCTGCAGGACCTGCGCCGAGACTACGGGGCCCTGGGCATCAGCCTGCTGCTAGCCTGCTGCAGCCCGCCTGTGAGAGACATTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS GCA 90 bp TCGCCAGCCACGCTCGAGCCAAAGCGCTTGTGGAGCTGCCCGAAGTaGGACACGAGTGTGGCCACCACGATGACCAGCAGCTCCGTGGGC +
Preference number: 5 (lower is better)
Translates to: SPATLEPKRLWSCPK*DTSVATTMTSSSVG
Trigger: GCCCACGGAGCTGCTGGTCATCGTGGTGGCCACACTCGTGTCGCACTTCGGGCAGCTCCACAAGCGCTTTGGCTCGAGCGTGGCTGGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CCA 90 bp GCCTGGCCCTGCTACAGATGGGCATCGGTGGCCTCCAGCTCCCTGTaGCGGGCTCGTGCTGTCTGCACGGCATCGTGCACACTGAGGAAC +
Preference number: 5 (lower is better)
Translates to: AWPCYRWASVASSSL*RARAVCTASCTLRN
Trigger: GTTCCTCAGTGTGCACGATGCCGTGCAGACAGCACGAGCCCGCCACAGGGAGCTGGAGGCCACCGATGCCCATCTGTAGCAGGGCCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp GCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGTTGAGGGTGCTGCTGTaGGCTCCGGGCTGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: ASSRSGPTGCWSLSPPGGLRVLL*APGCRP
Trigger: CGGCCTGCAGCCCGGAGCCAACAGCAGCACCCTCAA...CCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATCTCGAGCCAAAGCGCTaGTGGAGCTGCCCGAAGTGC +
Preference number: 5 (lower is better)
Translates to: CARAVLGLNVCVSRAASHLEPKR*WSCPKC
Trigger: GCACTTCGGGCAGCTCCACAAGCGCTTTGGCTCGAG...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp GCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGGAGACCCTCGTGCACTaGGCCAGAGCCGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: ASSRSGPTGCWSLSPPGGETLVH*ARAAGS
Trigger: GGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTC...CCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS TCA 90 bp GATGGTCACGGAGGCCCCCATGGCAAAGCCATCGAGCAGTGGCTGTaGGAGGTAGGCGGACACGAAGCCCAGCCGGAGGACGCCCATGAG +
Preference number: 5 (lower is better)
Translates to: DGHGGPHGKAIEQWL*EVGGHEAQPEDAHE
Trigger: CTCATGGGCGTCCTCCGGCTGGGCTTCGTGTCCGCCTACCTCTCACAGCCACTGCTCGATGGCTTTGCCATGGGGGCCTCCGTGACCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS GCA 90 bp TGGGAGGGGTCAAAGCCGGCCAGCTGGAGCTCCCGGTCCACCACCTaGCCCACCATGAGGCAAAGCAGGCTGAAGATGCCCACGGAGACA +
Preference number: 5 (lower is better)
Translates to: WEGSKPASWSSRSTT*PTMRQSRLKMPTET
Trigger: TGTCTCCGTGGGCATCTTCAGCCTGCTTTGCCTCATGGTGGGGCAGGTGGTGGACCGGGAGCTCCAGCTGGCCGGCTTTGACCCCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS GCA 90 bp GTGGGGATGTCGCCAGCCACGCTCGAGCCAAAGCGCTTGTGGAGCTaGCCGAAGTGCGACACGAGTGTGGCCACCACGATGACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VGMSPATLEPKRLWS*PKCDTSVATTMTSS
Trigger: GCTGCTGGTCATCGTGGTGGCCACACTCGTGTCGCACTTCGGGCAGCTCCACAAGCGCTTTGGCTCGAGCGTGGCTGGCGACATCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS GCA 90 bp CCACAGCCAGCAGCTCCTGGTTGGCACGCACAGAGTAGCCGTGACTaGGGGCGAACATCTCCGCCAGCGAGATGGAGAAGGCGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: PQPAAPGWHAQSSRD*GRTSPPARWRRRQP
Trigger: TGGCTGCCGCCTTCTCCATCTCGCTGGCGGAGATGTTCGCCCGCAGTCACGGCTACTCTGTGCGTGCCAACCAGGAGCTGCTGGCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CCA 90 bp AGGCGGGTAGCACGTTGCAGCAGCCCACAGCCAGCAGCTCCTGGTTaGCACGCACAGAGTAGCCGTGACTGCGGGCGAACATCTCCGCCA +
Preference number: 5 (lower is better)
Translates to: RRVARCSSPQPAAPG*HAQSSRDCGRTSPP
Trigger: TGGCGGAGATGTTCGCCCGCAGTCACGGCTACTCTGTGCGTGCCAACCAGGAGCTGCTGGCTGTGGGCTGCTGCAACGTGCTACCCGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp AGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTGAGGGCTGTGACTCGTCCATCCTGTaGCGTCAGGTCCCGTGGCCG +
Preference number: 5 (lower is better)
Translates to: STLLGRACPCWLCWGEGCDSSIL*RQVPWP
Trigger: CGGCCACGGGACCTGACGCAACAGGATGGACGAGTC...ACAGCCCTCACCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp AGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCAATGGCAGCCGAGCCGTaGAGGGTGCTGCTGTTGGCT +
Preference number: 5 (lower is better)
Translates to: RDPRALGQSRWLLPAGWAMAAEP*RVLLLA
Trigger: AGCCAACAGCAGCACCCTCAACGGCTCGGCTGCCAT...TGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATGGTCTCAGCAGTGGCTaGCAGACGTCTGCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: CARAVLGLNVCVSRAASHGLSSG*QTSAVG
Trigger: ACCCACAGCAGACGTCTGCAAGCCACTGCTGAGACC...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp ACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCCTCCTTTCCCAGTaGGGGTTCCCCGGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: TQRPSCTWPEPLAPTSRVGLLSQ*GFPGFP
Trigger: GGGGAAACCGGGGAACCCCAACTGGGAAAGGAGGCC...CACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CCA 90 bp AAACCCGTGGGGATGTCGCCAGCCACGCTCGAGCCAAAGCGCTTGTaGAGCTGCCCGAAGTGCGACACGAGTGTGGCCACCACGATGACC +
Preference number: 5 (lower is better)
Translates to: KPVGMSPATLEPKRL*SCPKCDTSVATTMT
Trigger: GGTCATCGTGGTGGCCACACTCGTGTCGCACTTCGGGCAGCTCCACAAGCGCTTTGGCTCGAGCGTGGCTGGCGACATCCCCACGGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp GCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCATGGCCGACCTTTCCCTaGATCTCGGAAAACACCGTG +
Preference number: 5 (lower is better)
Translates to: AGTSSSTSPMWAPSLTAAWPTFP*ISENTV
Trigger: CACGGTGTTTTCCGAGATCAAGGGAAAGGTCGGCCA...TGCCGCGGTGAGGGACGGCGCCCACATAGGCGAGGTTGAGCTGCTGGTCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361661.6
CDS-3UTR CAA 90 bp GCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCACCAGGTGGGAGGTGTGAGGGGCACTaGGGTGTGTGGGGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: ASSRSGPTGCWSLSPPGGRCEGH*GVWGLL
Trigger: CAGAAGGCCCCACACACCCAAGTGCCCCTCACACCT...CCCACCTGGTGGTGACAAGCTCCAGCAGCCAGTGGGTCCGGACCTGCTTGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS TCA 90 bp AGCTGTTTCTACCCCAGGACGTCTGGTAAAGCCCGGTCATCAGCGTaGGGGCGGTGGCGACACGGATGGCGTAGCAGTCACGCCCGCAGT +
Preference number: 5 (lower is better)
Translates to: SCFYPRTSGKARSSA*GRWRHGWRSSHARS
Trigger: ACTGCGGGCGTGACTGCTACGCCATCCGTGTCGCCACCGCCCTCACGCTGATGACCGGGCTTTACCAGACGTCCTGGGGTAGAAACAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398520.6
ENST00000622731.4
CDS-3UTR CAA 90 bp ACACAGAGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGACGCCCAGCAGGTGTTaGAGCTGCGAGGTCAGGATG +
Preference number: 5 (lower is better)
Translates to: TQRPSCTWPEPLAPTSRVTPSRC*SCEVRM
Trigger: CATCCTGACCTCGCAGCTCAAACACCTGCTGGGCGT...CACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCTCTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp CGCACGGGCAGCGCCTGGATCCTGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGCGGAGGCAGAGGTTCTaGATTTCTGAGTGTTTGGGT +
Preference number: 5 (lower is better)
Translates to: RTGSAWILRPGSPGLERVRRQRF*ISECLG
Trigger: ACCCAAACACTCAGAAATCAAGAACCTCTGCCTCCG...CACACGTTCAAGCCCAGGACTGCCCGGGCGCAGGATCCAGGCGCTGCCCGTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTCTCGAGCCAAAGCGCTaGTGGAGCTGCCCGAAGTGC +
Preference number: 5 (lower is better)
Translates to: LGPACDQRASFPSWGSPVLEPKR*WSCPKC
Trigger: GCACTTCGGGCAGCTCCACAAGCGCTTTGGCTCGAG...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS TCA 90 bp GAAGGACGTATAGAGGCTGTAGATGGGCTGCAGCCCGGCCAGCAATaGGTAGGCGATGGCCTGCGGCACCAGGATGATGCCGATGACCAG +
Preference number: 5 (lower is better)
Translates to: EGRIEAVDGLQPGQQ*VGDGLRHQDDADDQ
Trigger: CTGGTCATCGGCATCATCCTGGTGCCGCAGGCCATCGCCTACTCATTGCTGGCCGGGCTGCAGCCCATCTACAGCCTCTATACGTCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS-3UTR CAA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTGGTCTCAGCAGTGGCTaGCAGACGTCTGCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: LGPACDQRASFPSWGSPVGLSSG*QTSAVG
Trigger: ACCCACAGCAGACGTCTGCAAGCCACTGCTGAGACC...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS TCA 90 bp ATCTCGGAAAACACCGTGGCGTTAGGGAGGCGGTGCTTAGAGGCCTaGCTGGTCCCACGTGAGGCCTCGGGTCTGTCCTGTTTGCAGACT +
Preference number: 5 (lower is better)
Translates to: ISENTVALGRRCLEA*LVPREASGLSCLQT
Trigger: AGTCTGCAAACAGGACAGACCCGAGGCCTCACGTGGGACCAGTCAGGCCTCTAAGCACCGCCTCCCTAACGCCACGGTGTTTTCCGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000622731.4
CDS-3UTR CAA 90 bp CTCCCGCCGAAGCACCCTGTTGGGGAGAGCGTGTCCTTGCTGGCTGTGCTGGGGTCGGGTCTGTCCTGTTaGCAGACTCCAATGTACTTT +
Preference number: 5 (lower is better)
Translates to: LPPKHPVGESVSLLAVLGSGLSC*QTPMYF
Trigger: AAAGTACATTGGAGTCTGCAAACAGGACAGACCCGA...CCCCAGCACAGCCAGCAAGGACACGCTCTCCCCAACAGGGTGCTTCGGCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361661.6
CDS-3UTR CAA 90 bp AGGCAGAGGTTCTTGATTTCTGAGTGTTTGGGTCCTGCGTGTGATCAGAGGGCCTTGAGGGTGCTGCTGTaGGCTCCGGGCTGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: RQRFLISECLGPACDQRALRVLL*APGCRP
Trigger: CGGCCTGCAGCCCGGAGCCAACAGCAGCACCCTCAA...GGCCCTCTGATCACACGCAGGACCCAAACACTCAGAAATCAAGAACCTCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp TGCGCCCGGGCAGTCCTGGGCTTGAACGTGTGTGTCAGCCGCGCTGCCAGCCATTTGATTTCTGAGTGTTaGGGTCCTGCGTGTGATCAG +
Preference number: 5 (lower is better)
Translates to: CARAVLGLNVCVSRAASHLISEC*GPACDQ
Trigger: CTGATCACACGCAGGACCCAAACACTCAGAAATCAA...ATGGCTGGCAGCGCGGCTGACACACACGTTCAAGCCCAGGACTGCCCGGGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp AGACCCTCGTGCACTTGGCCAGAGCCGCTGGCTCCTACCAGCAGGGTGGGCACCTTGATTTCTGAGTGTTaGGGTCCTGCGTGTGATCAG +
Preference number: 5 (lower is better)
Translates to: RPSCTWPEPLAPTSRVGTLISEC*GPACDQ
Trigger: CTGATCACACGCAGGACCCAAACACTCAGAAATCAA...GGTGCCCACCCTGCTGGTAGGAGCCAGCGGCTCTGGCCAAGTGCACGAGGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp ACAGAGGAAAGAGGAAGACGAAAGGTAATCCTCAGGCCCACTAGCATGGCTGGTGACTCGTCCATCCTGTaGCGTCAGGTCCCGTGGCCG +
Preference number: 5 (lower is better)
Translates to: TEERGRRKVILRPTSMAGDSSIL*RQVPWP
Trigger: CGGCCACGGGACCTGACGCAACAGGATGGACGAGTC...ACCAGCCATGCTAGTGGGCCTGAGGATTACCTTTCGTCTTCCTCTTTCCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR CAA 90 bp TTGGGTCCTGCGTGTGATCAGAGGGCCTCCTTTCCCAGTTGGGGTTCCCCGGTTCGGAGGCAGAGGTTCTaGATTTCTGAGTGTTTGGGT +
Preference number: 5 (lower is better)
Translates to: LGPACDQRASFPSWGSPVRRQRF*ISECLG
Trigger: ACCCAAACACTCAGAAATCAAGAACCTCTGCCTCCG...AACCGGGGAACCCCAACTGGGAAAGGAGGCCCTCTGATCACACGCAGGACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS-3UTR CAA 90 bp GAGGAAAGAGGAAGACGAAAGGTAATCCTCAGGCCCACTAGCATGGCTGGTTTTATGGCAGCCGAGCCGTaGAGGGTGCTGCTGTTGGCT +
Preference number: 5 (lower is better)
Translates to: EERGRRKVILRPTSMAGFMAAEP*RVLLLA
Trigger: AGCCAACAGCAGCACCCTCAACGGCTCGGCTGCCAT...AAAACCAGCCATGCTAGTGGGCCTGAGGATTACCTTTCGTCTTCCTCTTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR CAA 90 bp TGTTGTGAAATTTGGAGGACGCTTGCTCAGGCTTCTCTCCTCTGCAGGCTGGCCAAATTTGGAGGACGCTaGCTCAGGCTTCTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: CCEIWRTLAQASLLCRLAKFGGR*LRLLSS
Trigger: AGAGGAGAGAAGCCTGAGCAAGCGTCCTCCAAATTT...GGCCAGCCTGCAGAGGAGAGAAGCCTGAGCAAGCGTCCTCCAAATTTCACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS TCA 90 bp GCTTCTCGTGAGGCTGGTGTGAGGGTCCCGCATTCTCGATGTCGTTaGTGTCGGCATTTCCTGTTAAATCAGCAAGATCTTTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ASREAGVRVPHSRCR*CRHFLLNQQDLSSS
Trigger: AGAGGAGGAAAGATCTTGCTGATTTAACAGGAAATGCCGACATCAACGACATCGAGAATGCGGGACCCTCACACCAGCCTCACGAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS-3UTR CAA 90 bp CTTTACAGAAATGTACTGATGACTGGTTACATCATCCACATGGTAAAGCCTGTTTTGAGGGTGCTGCTGTaGGCTCCGGGCTGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: LYRNVLMTGYIIHMVKPVLRVLL*APGCRP
Trigger: CGGCCTGCAGCCCGGAGCCAACAGCAGCACCCTCAA...AACAGGCTTTACCATGTGGATGATGTAACCAGTCATCAGTACATTTCTGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS GCA 90 bp TTCCTGTTAAATCAGCAAGATCTTTCCTCCTCTTCCAGAAGTTCCTaGGAGTCACTCCTCTGTGTTAATTGCCATGGGTGTTGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: FLLNQQDLSSSSRSS*ESLLCVNCHGCCWK
Trigger: CTTCCAGCAACACCCATGGCAATTAACACAGAGGAGTGACTCGCAGGAACTTCTGGAAGAGGAGGAAAGATCTTGCTGATTTAACAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS TCA 72 bp TGGCCTGCCCGGCGCCGCGCAGCAGGCTCAGCCATGTaGGGACCACCATGCCGGGCCCCTGGTGCCGCGGGA +
Preference number: 6 (lower is better)
Translates to: WPARRRAAGSAM*GPPCRAPGAAG
Trigger: TCCCGCGGCACCAGGGGCCCGGCATGGTGGTCCTCACATGGCTGAGCCTGCTGCGCGGCGCCGGGCAGGCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CCA 72 bp CCTGGCCTTCAGCATCTCACGCAGACCCCGGGGTGCTaGGCGCTGCCGTCGGACCGGCACCGGCCCTCTGCC +
Preference number: 6 (lower is better)
Translates to: PGLQHLTQTPGC*ALPSDRHRPSA
Trigger: GGCAGAGGGCCGGTGCCGGTCCGACGGCAGCGCCCAGCACCCCGGGGTCTGCGTGAGATGCTGAAGGCCAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS CAA 72 bp GTCCCCGATGCGGGCCAGCAGGGCGGTGCGTGGGCGTaGGGTGCGGCCGGCCAGGCTGAGCAGCGAGAGGAT +
Preference number: 6 (lower is better)
Translates to: VPDAGQQGGAWA*GAAGQAEQRED
Trigger: ATCCTCTCGCTGCTCAGCCTGGCCGGCCGCACCCAACGCCCACGCACCGCCCTGCTGGCCCGCATCGGGGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CAA 90 bp GAAGGCCGTGTCCCCGATGCGGGCCAGCAGGGCGGTGCGTGGGCGTaGGGTGCGGCCGGCCAGGCTGAGCAGCGAGAGGATGACGCCAGC +
Preference number: 6 (lower is better)
Translates to: EGRVPDAGQQGGAWA*GAAGQAEQREDDAS
Trigger: GCTGGCGTCATCCTCTCGCTGCTCAGCCTGGCCGGCCGCACCCAACGCCCACGCACCGCCCTGCTGGCCCGCATCGGGGACACGGCCTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS GCA 72 bp TTCAGCATCTCACGCAGACCCCGGGGTGCTGGGCGCTaGCGTCGGACCGGCACCGGCCCTCTGCCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: FSISRRPRGAGR*RRTGTGPLPCC
Trigger: GCAGCAGGGCAGAGGGCCGGTGCCGGTCCGACGGCAGCGCCCAGCACCCCGGGGTCTGCGTGAGATGCTGAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS GCA 72 bp CAGCCTGGCCTTCAGCATCTCACGCAGACCCCGGGGTaGTGGGCGCTGCCGTCGGACCGGCACCGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: QPGLQHLTQTPG*WALPSDRHRPS
Trigger: AGAGGGCCGGTGCCGGTCCGACGGCAGCGCCCAGCACCCCGGGGTCTGCGTGAGATGCTGAAGGCCAGGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS CAA 90 bp CGCCCGCAGTCCAGCATGGCAGCCGAGCCGTTGAGGGTGCTGCTGTaGGCTCCGGGCTGCAGGCCGTCCTGGGAGGGGTCAAAGCCGGCC +
Preference number: 6 (lower is better)
Translates to: RPQSSMAAEPLRVLL*APGCRPSWEGSKPA
Trigger: GGCCGGCTTTGACCCCTCCCAGGACGGCCTGCAGCCCGGAGCCAACAGCAGCACCCTCAACGGCTCGGCTGCCATGCTGGACTGCGGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS TCA 72 bp ATGACGTCGCCTGCCAGGTACTCCCGCGGGCGGTACTaGCGCAGCCAGCGCGTGGCGGGGAGCAGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: MTSPARYSRGRY*RSQRVAGSRSC
Trigger: GCAGGACCTGCTCCCCGCCACGCGCTGGCTGCGTCAGTACCGCCCGCGGGAGTACCTGGCAGGCGACGTCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS GCA 72 bp GGGCGCTGCCGTCGGACCGGCACCGGCCCTCTGCCCTaGTGCAGAGGCTCAGGGGACTCGTCCATCCTGTTG +
Preference number: 6 (lower is better)
Translates to: GRCRRTGTGPLP*CRGSGDSSILL
Trigger: CAACAGGATGGACGAGTCCCCTGAGCCTCTGCAGCAGGGCAGAGGGCCGGTGCCGGTCCGACGGCAGCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS GCA 72 bp GCCGAGCCGTTGAGGGTGCTGCTGTTGGCTCCGGGCTaGAGGCCGTCCTGGGAGGGGTCAAAGCCGGCCAGC +
Preference number: 6 (lower is better)
Translates to: AEPLRVLLLAPG*RPSWEGSKPAS
Trigger: GCTGGCCGGCTTTGACCCCTCCCAGGACGGCCTGCAGCCCGGAGCCAACAGCAGCACCCTCAACGGCTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS GCA 72 bp GGCGCAGTCGATGACCACTGTGTGGAAGCCGGCCGCTaGGGGCACCAGCGCAGCCCTGGTGCTAACCGGGCC +
Preference number: 6 (lower is better)
Translates to: GAVDDHCVEAGR*GHQRSPGANRA
Trigger: GGCCCGGTTAGCACCAGGGCTGCGCTGGTGCCCGCAGCGGCCGGCTTCCACACAGTGGTCATCGACTGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CCA 72 bp CTCACAGGCGCGGAGGGCCCTGGGATGACGAGGGGCTaGCAAGACCACCGAGGACCGCAGGGCCCTCTGGCT +
Preference number: 6 (lower is better)
Translates to: LTGAEGPGMTRG*QDHRGPQGPLA
Trigger: AGCCAGAGGGCCCTGCGGTCCTCGGTGGTCTTGCCAGCCCCTCGTCATCCCAGGGCCCTCCGCGCCTGTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000622731.4
CDS CCA 72 bp AGGGTGCTGCTGTTGGCTCCGGGCTGCAGGCCGTCCTaGGAGGGGTCAAAGCCGGCCAGCTGGAGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: RVLLLAPGCRPS*EGSKPASWSSR
Trigger: CCGGGAGCTCCAGCTGGCCGGCTTTGACCCCTCCCAGGACGGCCTGCAGCCCGGAGCCAACAGCAGCACCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS CAA 72 bp GCCAGGCACACCGTGCTGGTGACCACGTCGCACACGTaGGCCTGCCCGGCGCCGCGCAGCAGGCTCAGCCAT +
Preference number: 6 (lower is better)
Translates to: ARHTVLVTTSHT*ACPAPRSRLSH
Trigger: ATGGCTGAGCCTGCTGCGCGGCGCCGGGCAGGCCAACGTGTGCGACGTGGTCACCAGCACGGTGTGCCTGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CAA 90 bp AGCAGCACCGCCAGGCACACCGTGCTGGTGACCACGTCGCACACGTaGGCCTGCCCGGCGCCGCGCAGCAGGCTCAGCCATGTGAGGACC +
Preference number: 6 (lower is better)
Translates to: SSTARHTVLVTTSHT*ACPAPRSRLSHVRT
Trigger: GGTCCTCACATGGCTGAGCCTGCTGCGCGGCGCCGGGCAGGCCAACGTGTGCGACGTGGTCACCAGCACGGTGTGCCTGGCGGTGCTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS GCA 72 bp CACACCGTGCTGGTGACCACGTCGCACACGTTGGCCTaGCCGGCGCCGCGCAGCAGGCTCAGCCATGTGAGG +
Preference number: 6 (lower is better)
Translates to: HTVLVTTSHTLA*PAPRSRLSHVR
Trigger: CCTCACATGGCTGAGCCTGCTGCGCGGCGCCGGGCAGGCCAACGTGTGCGACGTGGTCACCAGCACGGTGTG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS GCA 72 bp CCAGGGCCCCGTAGTCTCGGCGCAGGTCCTGCAGCGTaGTCACACCGGCTGCGTCTAGGAACAGCAGCGGGG +
Preference number: 6 (lower is better)
Translates to: PGPRSLGAGPAA*SHRLRLGTAAG
Trigger: CCCCGCTGCTGTTCCTAGACGCAGCCGGTGTGAGCACGCTGCAGGACCTGCGCCGAGACTACGGGGCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CCA 72 bp TGCAGGCCGTCCTGGGAGGGGTCAAAGCCGGCCAGCTaGAGCTCCCGGTCCACCACCTGCCCCACCATGAGG +
Preference number: 6 (lower is better)
Translates to: CRPSWEGSKPAS*SSRSTTCPTMR
Trigger: CCTCATGGTGGGGCAGGTGGTGGACCGGGAGCTCCAGCTGGCCGGCTTTGACCCCTCCCAGGACGGCCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS CCA 72 bp AGGAACAGCAGCGGGGCGCAGTCGATGACCACTGTGTaGAAGCCGGCCGCTGCGGGCACCAGCGCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: RNSSGAQSMTTV*KPAAAGTSAAL
Trigger: CAGGGCTGCGCTGGTGCCCGCAGCGGCCGGCTTCCACACAGTGGTCATCGACTGCGCCCCGCTGCTGTTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CAA 72 bp CAGTCACGCCCGCAGTCCAGCATGGCAGCCGAGCCGTaGAGGGTGCTGCTGTTGGCTCCGGGCTGCAGGCCG +
Preference number: 6 (lower is better)
Translates to: QSRPQSSMAAEP*RVLLLAPGCRP
Trigger: CGGCCTGCAGCCCGGAGCCAACAGCAGCACCCTCAACGGCTCGGCTGCCATGCTGGACTGCGGGCGTGACTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS CAA 90 bp ATGCCGGGCCCCTGGTGCCGCGGGATCCGCACGCCCAGCAGGTGTTaGAGCTGCGAGGTCAGGATGGTCACGGAGGCCCCCATGGCAAAG +
Preference number: 6 (lower is better)
Translates to: MPGPWCRGIRTPSRC*SCEVRMVTEAPMAK
Trigger: CTTTGCCATGGGGGCCTCCGTGACCATCCTGACCTCGCAGCTCAAACACCTGCTGGGCGTGCGGATCCCGCGGCACCAGGGGCCCGGCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS TCA 72 bp AGTCACGCCCGCAGTCCAGCATGGCAGCCGAGCCGTTaGGGGTGCTGCTGTTGGCTCCGGGCTGCAGGCCGT +
Preference number: 6 (lower is better)
Translates to: SHARSPAWQPSR*GCCCWLRAAGR
Trigger: ACGGCCTGCAGCCCGGAGCCAACAGCAGCACCCTCAACGGCTCGGCTGCCATGCTGGACTGCGGGCGTGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS TCA 72 bp GCTGCCCGAAGTGCGACACGAGTGTGGCCACCACGATaGCCAGCAGCTCCGTGGGCAGCGGCACCCTCAGGC +
Preference number: 6 (lower is better)
Translates to: AARSATRVWPPR*PAAPWAAAPSG
Trigger: GCCTGAGGGTGCCGCTGCCCACGGAGCTGCTGGTCATCGTGGTGGCCACACTCGTGTCGCACTTCGGGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS TCA 72 bp CGGCTGCGTCTAGGAACAGCAGCGGGGCGCAGTCGATaGCCACTGTGTGGAAGCCGGCCGCTGCGGGCACCA +
Preference number: 6 (lower is better)
Translates to: RLRLGTAAGRSR*PLCGSRPLRAP
Trigger: TGGTGCCCGCAGCGGCCGGCTTCCACACAGTGGTCATCGACTGCGCCCCGCTGCTGTTCCTAGACGCAGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS TCA 72 bp CTCTCACAGGCGGGCTGCAGCAGGCTAGCAGCAGGCTaGTGCCCAGGGCCCCGTAGTCTCGGCGCAGGTCCT +
Preference number: 6 (lower is better)
Translates to: LSQAGCSRLAAG*CPGPRSLGAGP
Trigger: AGGACCTGCGCCGAGACTACGGGGCCCTGGGCATCAGCCTGCTGCTAGCCTGCTGCAGCCCGCCTGTGAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS GCA 72 bp CTCAGCCATGTGAGGACCACCATGCCGGGCCCCTGGTaGCGCGGGATCCGCACGCCCAGCAGGTGTTTGAGC +
Preference number: 6 (lower is better)
Translates to: LSHVRTTMPGPW*RGIRTPSRCLS
Trigger: GCTCAAACACCTGCTGGGCGTGCGGATCCCGCGGCACCAGGGGCCCGGCATGGTGGTCCTCACATGGCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS GCA 72 bp CTCTGTGCTGACCAGCATACAGGTGGCCGCGGTGCCTaGCCAGACCAGCGCGTCAGCCGGGCTCATCCGCCA +
Preference number: 6 (lower is better)
Translates to: LCADQHTGGRGA*PDQRVSRAHPP
Trigger: TGGCGGATGAGCCCGGCTGACGCGCTGGTCTGGGCAGGCACCGCGGCCACCTGTATGCTGGTCAGCACAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CCA 72 bp AGGCTCAGCCATGTGAGGACCACCATGCCGGGCCCCTaGTGCCGCGGGATCCGCACGCCCAGCAGGTGTTTG +
Preference number: 6 (lower is better)
Translates to: RLSHVRTTMPGP*CRGIRTPSRCL
Trigger: CAAACACCTGCTGGGCGTGCGGATCCCGCGGCACCAGGGGCCCGGCATGGTGGTCCTCACATGGCTGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CCA 72 bp GCACGCCGGGCTCAGGGACGAGGCCCTCGAACTCTGTaGCATCCTCGTAGAAGGCCGTGTCCCCGATGCGGG +
Preference number: 6 (lower is better)
Translates to: ARRAQGRGPRTL*HPRRRPCPRCG
Trigger: CCCGCATCGGGGACACGGCCTTCTACGAGGATGCCACAGAGTTCGAGGGCCTCGTCCCTGAGCCCGGCGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CAA 72 bp TCCAGCATGGCAGCCGAGCCGTTGAGGGTGCTGCTGTaGGCTCCGGGCTGCAGGCCGTCCTGGGAGGGGTCA +
Preference number: 6 (lower is better)
Translates to: SSMAAEPLRVLL*APGCRPSWEGS
Trigger: TGACCCCTCCCAGGACGGCCTGCAGCCCGGAGCCAACAGCAGCACCCTCAACGGCTCGGCTGCCATGCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS CAA 90 bp AGGGCGGCGCTGGTGGCGAAGCAGTGGAGGAAGGCGGGTAGCACGTaGCAGCAGCCCACAGCCAGCAGCTCCTGGTTGGCACGCACAGAG +
Preference number: 6 (lower is better)
Translates to: RAALVAKQWRKAGST*QQPTASSSWLARTE
Trigger: CTCTGTGCGTGCCAACCAGGAGCTGCTGGCTGTGGGCTGCTGCAACGTGCTACCCGCCTTCCTCCACTGCTTCGCCACCAGCGCCGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CCA 72 bp AGGCTCTTGGCCAGGGCGGCGCTGGTGGCGAAGCAGTaGAGGAAGGCGGGTAGCACGTTGCAGCAGCCCACA +
Preference number: 6 (lower is better)
Translates to: RLLARAALVAKQ*RKAGSTLQQPT
Trigger: TGTGGGCTGCTGCAACGTGCTACCCGCCTTCCTCCACTGCTTCGCCACCAGCGCCGCCCTGGCCAAGAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS GCA 72 bp CCTGCTGCAGAGGCTCAGGGGACTCGTCCATCCTGTTaGGTCAGGTCCCGTGGCCGACCTGAGGGAGTCCTC +
Preference number: 6 (lower is better)
Translates to: PAAEAQGTRPSC*VRSRGRPEGVL
Trigger: GAGGACTCCCTCAGGTCGGCCACGGGACCTGACGCAACAGGATGGACGAGTCCCCTGAGCCTCTGCAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398516.3
ENST00000398520.6
CDS CCA 72 bp GGGATGTCGCCAGCCACGCTCGAGCCAAAGCGCTTGTaGAGCTGCCCGAAGTGCGACACGAGTGTGGCCACC +
Preference number: 6 (lower is better)
Translates to: GMSPATLEPKRL*SCPKCDTSVAT
Trigger: GGTGGCCACACTCGTGTCGCACTTCGGGCAGCTCCACAAGCGCTTTGGCTCGAGCGTGGCTGGCGACATCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CCA 72 bp CTGTCTTCACCAGGCTCTTGGCCAGGGCGGCGCTGGTaGCGAAGCAGTGGAGGAAGGCGGGTAGCACGTTGC +
Preference number: 6 (lower is better)
Translates to: LSSPGSWPGRRW*RSSGGRRVARC
Trigger: GCAACGTGCTACCCGCCTTCCTCCACTGCTTCGCCACCAGCGCCGCCCTGGCCAAGAGCCTGGTGAAGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CAA 72 bp GTGGGGATGTCGCCAGCCACGCTCGAGCCAAAGCGCTaGTGGAGCTGCCCGAAGTGCGACACGAGTGTGGCC +
Preference number: 6 (lower is better)
Translates to: VGMSPATLEPKR*WSCPKCDTSVA
Trigger: GGCCACACTCGTGTCGCACTTCGGGCAGCTCCACAAGCGCTTTGGCTCGAGCGTGGCTGGCGACATCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS GCA 72 bp GATGATGCCGATGACCAGCCCAGACATGACGTCGCCTaGCAGGTACTCCCGCGGGCGGTACTGACGCAGCCA +
Preference number: 6 (lower is better)
Translates to: DDADDQPRHDVA*QVLPRAVLTQP
Trigger: TGGCTGCGTCAGTACCGCCCGCGGGAGTACCTGGCAGGCGACGTCATGTCTGGGCTGGTCATCGGCATCATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS GCA 72 bp TCAAAGCCGGCCAGCTGGAGCTCCCGGTCCACCACCTaGCCCACCATGAGGCAAAGCAGGCTGAAGATGCCC +
Preference number: 6 (lower is better)
Translates to: SKPASWSSRSTT*PTMRQSRLKMP
Trigger: GGGCATCTTCAGCCTGCTTTGCCTCATGGTGGGGCAGGTGGTGGACCGGGAGCTCCAGCTGGCCGGCTTTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS GCA 72 bp TCGCCAGCCACGCTCGAGCCAAAGCGCTTGTGGAGCTaGCCGAAGTGCGACACGAGTGTGGCCACCACGATG +
Preference number: 6 (lower is better)
Translates to: SPATLEPKRLWS*PKCDTSVATTM
Trigger: CATCGTGGTGGCCACACTCGTGTCGCACTTCGGGCAGCTCCACAAGCGCTTTGGCTCGAGCGTGGCTGGCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS GCA 72 bp TGGTGGCGAAGCAGTGGAGGAAGGCGGGTAGCACGTTaGAGCAGCCCACAGCCAGCAGCTCCTGGTTGGCAC +
Preference number: 6 (lower is better)
Translates to: WWRSSGGRRVAR*SSPQPAAPGWH
Trigger: GTGCCAACCAGGAGCTGCTGGCTGTGGGCTGCTGCAACGTGCTACCCGCCTTCCTCCACTGCTTCGCCACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS TCA 72 bp TACCCCAGGACGTCTGGTAAAGCCCGGTCATCAGCGTaGGGGCGGTGGCGACACGGATGGCGTAGCAGTCAC +
Preference number: 6 (lower is better)
Translates to: YPRTSGKARSSA*GRWRHGWRSSH
Trigger: GTGACTGCTACGCCATCCGTGTCGCCACCGCCCTCACGCTGATGACCGGGCTTTACCAGACGTCCTGGGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398520.6
ENST00000622731.4
CDS GCA 72 bp GCAGCTCCTGGTTGGCACGCACAGAGTAGCCGTGACTaGGGGCGAACATCTCCGCCAGCGAGATGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: AAPGWHAQSSRD*GRTSPPARWRR
Trigger: CCTTCTCCATCTCGCTGGCGGAGATGTTCGCCCGCAGTCACGGCTACTCTGTGCGTGCCAACCAGGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS CAA 72 bp CCCTGCTGCAGAGGCTCAGGGGACTCGTCCATCCTGTaGCGTCAGGTCCCGTGGCCGACCTTTCCCTTGATC +
Preference number: 6 (lower is better)
Translates to: PCCRGSGDSSIL*RQVPWPTFPLI
Trigger: GATCAAGGGAAAGGTCGGCCACGGGACCTGACGCAACAGGATGGACGAGTCCCCTGAGCCTCTGCAGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000622731.4
CDS CAA 90 bp ATGAAACCCGTGGGGATGTCGCCAGCCACGCTCGAGCCAAAGCGCTaGTGGAGCTGCCCGAAGTGCGACACGAGTGTGGCCACCACGATG +
Preference number: 6 (lower is better)
Translates to: MKPVGMSPATLEPKR*WSCPKCDTSVATTM
Trigger: CATCGTGGTGGCCACACTCGTGTCGCACTTCGGGCAGCTCCACAAGCGCTTTGGCTCGAGCGTGGCTGGCGACATCCCCACGGGTTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000398516.3
CDS TCA 72 bp ATAGAGGCTGTAGATGGGCTGCAGCCCGGCCAGCAATaGGTAGGCGATGGCCTGCGGCACCAGGATGATGCC +
Preference number: 6 (lower is better)
Translates to: IEAVDGLQPGQQ*VGDGLRHQDDA
Trigger: GGCATCATCCTGGTGCCGCAGGCCATCGCCTACTCATTGCTGGCCGGGCTGCAGCCCATCTACAGCCTCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361661.6
ENST00000398516.3
ENST00000398520.6
ENST00000622731.4
CDS TCA 72 bp AGGGAGGCGGTGCTTAGAGGCCTGACTGGTCCCACGTaGGGCCTCGGGTCTGTCCTGTTTGCAGACTCCAAT +
Preference number: 6 (lower is better)
Translates to: REAVLRGLTGPT*GLGSVLFADSN
Trigger: ATTGGAGTCTGCAAACAGGACAGACCCGAGGCCTCACGTGGGACCAGTCAGGCCTCTAAGCACCGCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000622731.4
CDS GCA 72 bp TTAAACATTCTTCTCAGCGACGTTAGGCAAAGACTTTaGTCCCAGGACACCAGGTGCCCAGGACACCCTGGA +
Preference number: 6 (lower is better)
Translates to: LNILLSDVRQRL*SQDTRCPGHPG
Trigger: TCCAGGGTGTCCTGGGCACCTGGTGTCCTGGGAGCAAAGTCTTTGCCTAACGTCGCTGAGAAGAATGTTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000622731.4
CDS TCA 72 bp GAGGCTGGTGTGAGGGTCCCGCATTCTCGATGTCGTTaGTGTCGGCATTTCCTGTTAAATCAGCAAGATCTT +
Preference number: 6 (lower is better)
Translates to: EAGVRVPHSRCR*CRHFLLNQQDL
Trigger: AAGATCTTGCTGATTTAACAGGAAATGCCGACATCAACGACATCGAGAATGCGGGACCCTCACACCAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6
CDS GCA 72 bp GACTGGTCCCACGTGAGGCCTCGGGTCTGTCCTGTTTaGAGACTCCAATGTACTTTCACTTTAAACATTCTT +
Preference number: 6 (lower is better)
Translates to: DWSHVRPRVCPV*RLQCTFTLNIL
Trigger: AAGAATGTTTAAAGTGAAAGTACATTGGAGTCTGCAAACAGGACAGACCCGAGGCCTCACGTGGGACCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361661.6
ENST00000622731.4
CDS GCA 72 bp AATCAGCAAGATCTTTCCTCCTCTTCCAGAAGTTCCTaGGAGTCACTCCTCTGTGTTAATTGCCATGGGTGT +
Preference number: 6 (lower is better)
Translates to: NQQDLSSSSRSS*ESLLCVNCHGC
Trigger: ACACCCATGGCAATTAACACAGAGGAGTGACTCGCAGGAACTTCTGGAAGAGGAGGAAAGATCTTGCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398520.6