Pregenerated sensors for SLC25A53 (Homo sapiens)
Ensembl gene IDs: ENSG00000269743Ensembl transcript IDs: ENST00000467290.1, ENST00000594199.3
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGATGCATAGGGTGAGGTACTGCGGAAGGGGCTCAGAGCTTCTGTaGCCTCCCTGGGTCACCACCCTCCAGGAACCTCCACATGTTCAG | + |
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Preference number: 1 (lower is better) Translates to: EMHRVRYCGRGSELL*PPWVTTLQEPPHVQ Trigger: CTGAACATGTGGAGGTTCCTGGAGGGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCCGCAGTACCTCACCCTATGCATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR CCA 90 bp | TCCCTGGGTCACCACCCTCCAGGAACCTCCACATGTTCAGCTATCTaGAAGCTCTCCAAACCCAGTGCTTTGGGGTTTTTATGGAAGCTT | + |
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Preference number: 1 (lower is better) Translates to: SLGHHPPGTSTCSAI*KLSKPSALGFLWKL Trigger: AAGCTTCCATAAAAACCCCAAAGCACTGGGTTTGGAGAGCTTCCAGATAGCTGAACATGTGGAGGTTCCTGGAGGGTGGTGACCCAGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR CCA 90 bp | AGACTGGCATGTGAAGAAGGAGCACTGCAGGTGGAAAGAATAGTGTaGGCCAGAGTATGGCCATGGGAAAGTTCATGGAATGTCTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: RLACEEGALQVERIV*ARVWPWESSWNVWG Trigger: TCCCCAGACATTCCATGAACTTTCCCATGGCCATACTCTGGCCCACACTATTCTTTCCACCTGCAGTGCTCCTTCTTCACATGCCAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR GCA 90 bp | CAGATGTGGAAGCTCATCTTCAGCTCTCCTGGACCAGCCATTTTCTaGCAACCTTGGTGGCAAATGCTCTCTGACATCATACCTCCAACA | + |
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Preference number: 1 (lower is better) Translates to: QMWKLIFSSPGPAIF*QPWWQMLSDIIPPT Trigger: TGTTGGAGGTATGATGTCAGAGAGCATTTGCCACCAAGGTTGGCAGAAAATGGCTGGTCCAGGAGAGCTGAAGATGAGCTTCCACATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR CCA 90 bp | GGAGCACTGCAGGTGGAAAGAATAGTGTGGGCCAGAGTATGGCCATaGGAAAGTTCATGGAATGTCTGGGGAGAGAACAATAGTTCATTA | + |
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Preference number: 1 (lower is better) Translates to: GALQVERIVWARVWP*ESSWNVWGENNSSL Trigger: TAATGAACTATTGTTCTCTCCCCAGACATTCCATGAACTTTCCCATGGCCATACTCTGGCCCACACTATTCTTTCCACCTGCAGTGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR TCA 90 bp | GAATATTTCCATGTCCAGATGTGTGGAGTTTTCCCACACACTAAGTaGGCAATCAGTTCTGCAGCGAACACCAGCTGGGTGTACTCCAAT | + |
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Preference number: 1 (lower is better) Translates to: EYFHVQMCGVFPHTK*AISSAANTSWVYSN Trigger: ATTGGAGTACACCCAGCTGGTGTTCGCTGCAGAACTGATTGCTCACTTAGTGTGTGGGAAAACTCCACACATCTGGACATGGAAATATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR TCA 90 bp | TCCTGGACCAGCCATTTTCTGCCAACCTTGGTGGCAAATGCTCTCTaGCATCATACCTCCAACAACCATGTCTTTAATTTCTGTGGCATT | + |
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Preference number: 1 (lower is better) Translates to: SWTSHFLPTLVANAL*HHTSNNHVFNFCGI Trigger: AATGCCACAGAAATTAAAGACATGGTTGTTGGAGGTATGATGTCAGAGAGCATTTGCCACCAAGGTTGGCAGAAAATGGCTGGTCCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR TCA 90 bp | GCATCTTTTTCCTTTCCTTATGCAGACTCTGTGTTCATACTTCCTTaGATCCACAAGTTGAGTACTGTCCCAACACATCCCGATCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: ASFSFPYADSVFILP*IHKLSTVPTHPDLQ Trigger: CTGCAGATCGGGATGTGTTGGGACAGTACTCAACTTGTGGATTCAAGGAAGTATGAACACAGAGTCTGCATAAGGAAAGGAAAAAGATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGTACTGCGGAAGGGGCTCAGAGCTTCTGTGCCCTCCCTGGGTCACCACCCATCTTCAGCTCTCCTaGACCAGCCATTTTCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: VRYCGRGSELLCPPWVTTHLQLS*TSHFLP Trigger: TGGCAGAAAATGGCTGGTCCAGGAGAGCTGAAGATG...GGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCCGCAGTACCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGTACTGCGGAAGGGGCTCAGAGCTTCTGTGCCCTCCCTGGGTCACCACCGCCAGAGTATGGCCATaGGAAAGTTCATGGAATGTC | + |
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Preference number: 2 (lower is better) Translates to: VRYCGRGSELLCPPWVTTARVWP*ESSWNV Trigger: GACATTCCATGAACTTTCCCATGGCCATACTCTGGC...GGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCCGCAGTACCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCCTCCCTGGGTCACCACCCTCCAGGAACCTCCACATGTTCAGCTATCTGAGGTGGAGGTTGCAGTaGGCTGAGATCACACCATTG | + |
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Preference number: 2 (lower is better) Translates to: CALPGSPPSRNLHMFSYLRWRLQ*AEITPL Trigger: CAATGGTGTGATCTCAGCTCACTGCAACCTCCACCT...CAGATAGCTGAACATGTGGAGGTTCCTGGAGGGTGGTGACCCAGGGAGGGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGGGCTCAGAGCTTCTGTGCCCTCCCTGGGTCACCACCCTCCAGGAACCTATTTTCTGCCAACCTTaGTGGCAAATGCTCTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: GRGSELLCPPWVTTLQEPIFCQP*WQMLSD Trigger: GTCAGAGAGCATTTGCCACCAAGGTTGGCAGAAAAT...AGGTTCCTGGAGGGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGTACTGCGGAAGGGGCTCAGAGCTTCTGTGCCCTCCCTGGGTCACCACCGCTTTGGGGTTTTTATaGAAGCTTCATTGCGTAGGC | + |
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Preference number: 2 (lower is better) Translates to: VRYCGRGSELLCPPWVTTALGFL*KLHCVG Trigger: GCCTACGCAATGAAGCTTCCATAAAAACCCCAAAGC...GGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCCGCAGTACCTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR CAA 90 bp | GAGGTCGGGAATGAGGCTGTTAAGTCCCAACCCTCTAATGGTGCCTaGGTCTTCCTGGTGACTAGTTCCCATCCTGAAGCAACCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: EVGNEAVKSQPSNGA*VFLVTSSHPEATRG Trigger: GCCTCTGGTTGCTTCAGGATGGGAACTAGTCACCAGGAAGACCAAGGCACCATTAGAGGGTTGGGACTTAACAGCCTCATTCCCGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGGTCGGGAATGAGGCTGTTAAGTCCCAACCCTCTAATGGTGCCTTGGTCAAAATTAGCCAGGCATaGTGGTGGGCGCCTGTAATT | + |
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Preference number: 2 (lower is better) Translates to: LEVGNEAVKSQPSNGALVKISQA*WWAPVI Trigger: AATTACAGGCGCCCACCACCATGCCTGGCTAATTTT...GACCAAGGCACCATTAGAGGGTTGGGACTTAACAGCCTCATTCCCGACCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR GCA 90 bp | ATCCCTCTCCCCTCCCTGGAGGTCGGGAATGAGGCTGTTAAGTCCCAACCCTCTTTGAAAACTGATGTATaGAACTCTCAGATAGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: IPLPSLEVGNEAVKSQPSLKTDV*NSQIVQ Trigger: CTGAACTATCTGAGAGTTGCATACATCAGTTTTCAA...AGAGGGTTGGGACTTAACAGCCTCATTCCCGACCTCCAGGGAGGGGAGAGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGGTCGGGAATGAGGCTGTTAAGTCCCAACCCTCTAATGGTGCCTTGGTCTTTTTCCTTTCCTTATaGAGACTCTGTGTTCATACT | + |
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Preference number: 2 (lower is better) Translates to: LEVGNEAVKSQPSNGALVFFLSL*RLCVHT Trigger: AGTATGAACACAGAGTCTGCATAAGGAAAGGAAAAA...GACCAAGGCACCATTAGAGGGTTGGGACTTAACAGCCTCATTCCCGACCTCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR TCA 90 bp | CAAGTAAGACAAATACAGGACAAATTTGGTTCAGTAAGGAGATGCAAGAGGAGGGAGGTTGCAGTGAGCTaGGATCACACCATTGGCACT | + |
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Preference number: 2 (lower is better) Translates to: QVRQIQDKFGSVRRCKRREVAVS*DHTIGT Trigger: AGTGCCAATGGTGTGATCTCAGCTCACTGCAACCTC...CCTCCTCTTGCATCTCCTTACTGAACCAAATTTGTCCTGTATTTGTCTTACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR GCA 90 bp | AAGAGTAGGTTATTAAAGGGCTCTATTTCTTGCTCTGGCTGGTTATTACATGGGGGACCAGCCATTTTCTaGCAACCTTGGTGGCAAATG | + |
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Preference number: 2 (lower is better) Translates to: KSRLLKGSISCSGWLLHGGPAIF*QPWWQM Trigger: CATTTGCCACCAAGGTTGGCAGAAAATGGCTGGTCC...CCCATGTAATAACCAGCCAGAGCAAGAAATAGAGCCCTTTAATAACCTACTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAGTAGGTTATTAAAGGGCTCTATTTCTTGCTCTGGCTGGTTATTACATGGGGTGGAAAGAATAGTGTaGGCCAGAGTATGGCCATGG | + |
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Preference number: 2 (lower is better) Translates to: KSRLLKGSISCSGWLLHGVERIV*ARVWPW Trigger: CCATGGCCATACTCTGGCCCACACTATTCTTTCCAC...CCCATGTAATAACCAGCCAGAGCAAGAAATAGAGCCCTTTAATAACCTACTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR CCA 90 bp | AGCAACCAGAGGCTGCCAGCCATCAGTCAATTATTAGCATACAAAAAGATATCACCCGATCTGCAGATGTaGAAGCTCATCTTCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SNQRLPAISQLLAYKKISPDLQM*KLIFSS Trigger: AGAGCTGAAGATGAGCTTCCACATCTGCAGATCGGG...TGATATCTTTTTGTATGCTAATAATTGACTGATGGCTGGCAGCCTCTGGTTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR CAA 90 bp | TGCATCTTTTTCCTTTCCTTATGCAGACTCTGTGTTCATACTTCCTaGAATCCACAAGTTGAGTACTGTCCCAACACATCCCGATCTGCA | + |
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Preference number: 2 (lower is better) Translates to: CIFFLSLCRLCVHTS*NPQVEYCPNTSRSA Trigger: TGCAGATCGGGATGTGTTGGGACAGTACTCAACTTGTGGATTCAAGGAAGTATGAACACAGAGTCTGCATAAGGAAAGGAAAAAGATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGTAAGACAAATACAGGACAAATTTGGTTCAGTAAGGAGATGCAAGAGGAGGCCATGGGAAAGTTCATaGAATGTCTGGGGAGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: QVRQIQDKFGSVRRCKRRPWESS*NVWGEN Trigger: GTTCTCTCCCCAGACATTCCATGAACTTTCCCATGG...CCTCCTCTTGCATCTCCTTACTGAACCAAATTTGTCCTGTATTTGTCTTACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR CAA 90 bp | TGGGCTTCAAGTTTGAGTTCACATGACCCCTTCTTTGGGTTTAATTaGCCAGAAAGGGTCACAGAACTTGGGGAAATACTTAACGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: WASSLSSHDPFFGFN*PERVTELGEILNVY Trigger: GTAAACGTTAAGTATTTCCCCAAGTTCTGTGACCCTTTCTGGCAAATTAAACCCAAAGAAGGGGTCATGTGAACTCAAACTTGAAGCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR TCA 90 bp | ATCGTCATGTACAAGGGACAGCACCCTGAGGATATACCATATCACAGCTTGATAAATCCCTGCTTTCAATaGGTTTTACAGTCTAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: IVMYKGQHPEDIPYHSLINPCFQ*VLQSSR Trigger: CCTACTAGACTGTAAAACTCATTGAAAGCAGGGATT...TATCAAGCTGTGATATGGTATATCCTCAGGGTGCTGTCCCTTGTACATGACGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR GCA 90 bp | AATATTTCCATGTCCAGATGTGTGGAGTTTTCCCACACACTAAGTGAGCAATCAGGTTCAGTAAGGAGATaGAAGAGGAGGGCATTACTA | + |
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Preference number: 2 (lower is better) Translates to: NISMSRCVEFSHTLSEQSGSVRR*KRRALL Trigger: TAGTAATGCCCTCCTCTTGCATCTCCTTACTGAACC...TGATTGCTCACTTAGTGTGTGGGAAAACTCCACACATCTGGACATGGAAATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGATGCAAGAGGAGGGCATTACTAAGATATCTGTAGGGGGAAACTATAACAGTTCATGGAATGTCTaGGGAGAGAACAATAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: KEMQEEGITKISVGGNYNSSWNV*GENNSS Trigger: TGAACTATTGTTCTCTCCCCAGACATTCCATGAACT...GTTATAGTTTCCCCCTACAGATATCTTAGTAATGCCCTCCTCTTGCATCTCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR CCA 90 bp | ATTTGCCAGAAAGGGTCACAGAACTTGGGGAAATACTTAACGTTTACCACTTTATGGGCTTCAAGGAACTaGAAGGATTTTGGTAGACTG | + |
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Preference number: 2 (lower is better) Translates to: ICQKGSQNLGKYLTFTTLWASRN*KDFGRL Trigger: CAGTCTACCAAAATCCTTCCAGTTCCTTGAAGCCCA...TAAAGTGGTAAACGTTAAGTATTTCCCCAAGTTCTGTGACCCTTTCTGGCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR GCA 90 bp | AAGAGTAGGTTATTAAAGGGCTCTATTTCTTGCTCTGGCTGGTTATTACATGGGTCTTTGGGTTTAATTTaGCAGAAAGGGTCACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: KSRLLKGSISCSGWLLHGSLGLI*QKGSQN Trigger: GTTCTGTGACCCTTTCTGGCAAATTAAACCCAAAGA...CCCATGTAATAACCAGCCAGAGCAAGAAATAGAGCCCTTTAATAACCTACTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR TCA 90 bp | ATTTGCCAGAAAGGGTCACAGAACTTGGGGAAATACTTAACGTTTACCACTTTAGTGTTCATACTTCCTTaGATCCACAAGTTGAGTACT | + |
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Preference number: 2 (lower is better) Translates to: ICQKGSQNLGKYLTFTTLVFILP*IHKLST Trigger: AGTACTCAACTTGTGGATTCAAGGAAGTATGAACAC...TAAAGTGGTAAACGTTAAGTATTTCCCCAAGTTCTGTGACCCTTTCTGGCAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR CCA 90 bp | CAGGACAAATTTGGTTCAGTAAGGAGATGCAAGAGGAGGGCATTACTAAGATATATTATGGCTAGTGTTTaGGGTTTATGTAAGTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: QDKFGSVRRCKRRALLRYIMASV*GLCKWS Trigger: ACTCCACTTACATAAACCCCAAACACTAGCCATAAT...ATATCTTAGTAATGCCCTCCTCTTGCATCTCCTTACTGAACCAAATTTGTCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR CAA 90 bp | ATCTTGGAAATCCTCAAAATTCCAGAGTTGAAACAAATGGTACAGTaGTACAGTGTGATTCTGTTTGTGAAATTTCAGTTCCTGAACTGG | + |
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Preference number: 2 (lower is better) Translates to: ILEILKIPELKQMVQ*YSVILFVKFQFLNW Trigger: CCAGTTCAGGAACTGAAATTTCACAAACAGAATCACACTGTACAACTGTACCATTTGTTTCAACTCTGGAATTTTGAGGATTTCCAAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR CAA 90 bp | GCTGCCAGCCATCAGTCAATTATTAGCATACAAAAAGATATCACTTaGGAAATTCTAAGGATTTTAGGAGTTGTATGCCAAGAAACAGGA | + |
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Preference number: 2 (lower is better) Translates to: AASHQSIISIQKDIT*EILRILGVVCQETG Trigger: TCCTGTTTCTTGGCATACAACTCCTAAAATCCTTAGAATTTCCAAAGTGATATCTTTTTGTATGCTAATAATTGACTGATGGCTGGCAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR GCA 72 bp | AGGGTGAGGTACTGCGGAAGGGGCTCAGAGCTTCTGTaGCCTCCCTGGGTCACCACCCTCCAGGAACCTCCA | + |
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Preference number: 3 (lower is better) Translates to: RVRYCGRGSELL*PPWVTTLQEPP Trigger: TGGAGGTTCCTGGAGGGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCCGCAGTACCTCACCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR CAA 90 bp | TGTGCCCTCCCTGGGTCACCACCCTCCAGGAACCTCCACATGTTCAGCTATCTGGCTGAGATCACACCATaGGCACTCCAGCCTGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: CALPGSPPSRNLHMFSYLAEITP*ALQPGQ Trigger: TTGCCCAGGCTGGAGTGCCAATGGTGTGATCTCAGC...CAGATAGCTGAACATGTGGAGGTTCCTGGAGGGTGGTGACCCAGGGAGGGCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR CAA 90 bp | GTACTGCGGAAGGGGCTCAGAGCTTCTGTGCCCTCCCTGGGTCACCACCCTCCATCCAAACCCAGTGCTTaGGGGTTTTTATGGAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: VLRKGLRASVPSLGHHPPSKPSA*GFLWKL Trigger: AAGCTTCCATAAAAACCCCAAAGCACTGGGTTTGGA...TGGAGGGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCCGCAGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR TCA 72 bp | AGTCCCAACCCTCTAATGGTGCCTTGGTCTTCCTGGTaGCTAGTTCCCATCCTGAAGCAACCAGAGGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: SPNPLMVPWSSW*LVPILKQPEAA Trigger: GGCAGCCTCTGGTTGCTTCAGGATGGGAACTAGTCACCAGGAAGACCAAGGCACCATTAGAGGGTTGGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR CCA 72 bp | GGTGATCAACTTAACCTTCCATCCCTCTCCCCTCCCTaGAGGTCGGGAATGAGGCTGTTAAGTCCCAACCCT | + |
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Preference number: 3 (lower is better) Translates to: GDQLNLPSLSPP*RSGMRLLSPNP Trigger: AGGGTTGGGACTTAACAGCCTCATTCCCGACCTCCAGGGAGGGGAGAGGGATGGAAGGTTAAGTTGATCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR-3UTR CAA 90 bp | GGAAGGGGCTCAGAGCTTCTGTGCCCTCCCTGGGTCACCACCCTCCAGGAACCTAATCAACTCAGTAATTaGACCAACGTTATTGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: GRGSELLCPPWVTTLQEPNQLSN*TNVIEH Trigger: GTGCTCAATAACGTTGGTCAAATTACTGAGTTGATT...AGGTTCCTGGAGGGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR CCA 72 bp | GCACTGCAGGTGGAAAGAATAGTGTGGGCCAGAGTATaGCCATGGGAAAGTTCATGGAATGTCTGGGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: ALQVERIVWARV*PWESSWNVWGE Trigger: CTCTCCCCAGACATTCCATGAACTTTCCCATGGCCATACTCTGGCCCACACTATTCTTTCCACCTGCAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR TCA 72 bp | CATGTCCAGATGTGTGGAGTTTTCCCACACACTAAGTaGGCAATCAGTTCTGCAGCGAACACCAGCTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: HVQMCGVFPHTK*AISSAANTSWV Trigger: CACCCAGCTGGTGTTCGCTGCAGAACTGATTGCTCACTTAGTGTGTGGGAAAACTCCACACATCTGGACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR CCA 72 bp | AGCTCTCCTGGACCAGCCATTTTCTGCCAACCTTGGTaGCAAATGCTCTCTGACATCATACCTCCAACAACC | + |
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Preference number: 3 (lower is better) Translates to: SSPGPAIFCQPW*QMLSDIIPPTT Trigger: GGTTGTTGGAGGTATGATGTCAGAGAGCATTTGCCACCAAGGTTGGCAGAAAATGGCTGGTCCAGGAGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR CCA 72 bp | TTGAGTACTGTCCCAACACATCCCGATCTGCAGATGTaGAAGCTCATCTTCAGCTCTCCTGGACCAGCCATT | + |
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Preference number: 3 (lower is better) Translates to: LSTVPTHPDLQM*KLIFSSPGPAI Trigger: AATGGCTGGTCCAGGAGAGCTGAAGATGAGCTTCCACATCTGCAGATCGGGATGTGTTGGGACAGTACTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR TCA 72 bp | CAGCGAACACCAGCTGGGTGTACTCCAATTCCATTCTaGCACAATCTACCTGGAGATAGCGTCATATCCCAC | + |
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Preference number: 3 (lower is better) Translates to: QRTPAGCTPIPF*HNLPGDSVISH Trigger: GTGGGATATGACGCTATCTCCAGGTAGATTGTGTCAGAATGGAATTGGAGTACACCCAGCTGGTGTTCGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR CCA 72 bp | GCTGGGCTTCAAGGAACTGGAAGGATTTTGGTAGACTaGCATGTGAAGAAGGAGCACTGCAGGTGGAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: AGLQGTGRILVD*HVKKEHCRWKE Trigger: TTCTTTCCACCTGCAGTGCTCCTTCTTCACATGCCAGTCTACCAAAATCCTTCCAGTTCCTTGAAGCCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR TCA 72 bp | ATATATCAAAGGATAGAGATGAAGAGATGCATAGGGTaGGGTACTGCGGAAGGGGCTCAGAGCTTCTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: IYQRIEMKRCIG*GTAEGAQSFCA Trigger: GGCACAGAAGCTCTGAGCCCCTTCCGCAGTACCTCACCCTATGCATCTCTTCATCTCTATCCTTTGATATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR GCA 72 bp | AAGCTCATCTTCAGCTCTCCTGGACCAGCCATTTTCTaGCAACCTTGGTGGCAAATGCTCTCTGACATCATA | + |
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Preference number: 3 (lower is better) Translates to: KLIFSSPGPAIF*QPWWQMLSDII Trigger: TATGATGTCAGAGAGCATTTGCCACCAAGGTTGGCAGAAAATGGCTGGTCCAGGAGAGCTGAAGATGAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR CCA 72 bp | CAGGTGGAAAGAATAGTGTGGGCCAGAGTATGGCCATaGGAAAGTTCATGGAATGTCTGGGGAGAGAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: QVERIVWARVWP*ESSWNVWGENN Trigger: ATTGTTCTCTCCCCAGACATTCCATGAACTTTCCCATGGCCATACTCTGGCCCACACTATTCTTTCCACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| 3UTR GCA 72 bp | CACATGTTCAGCTATCTGGAAGCTCTCCAAACCCAGTaGTTTGGGGTTTTTATGGAAGCTTCATTGCGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: HMFSYLEALQTQ*FGVFMEASLRR Trigger: CCTACGCAATGAAGCTTCCATAAAAACCCCAAAGCACTGGGTTTGGAGAGCTTCCAGATAGCTGAACATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGCCAGAAAGGGTCACAGAACTTGGGGAAATACTTAACGTTTACCACTTTAGATCACCTGATGAGGTaGGGAGTTCGAGACCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ICQKGSQNLGKYLTFTTLDHLMR*GVRDQP Trigger: AGGCTGGTCTCGAACTCCCAACCTCATCAGGTGATC...TAAAGTGGTAAACGTTAAGTATTTCCCCAAGTTCTGTGACCCTTTCTGGCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| 3UTR CCA 72 bp | ATAGTGTGGGCCAGAGTATGGCCATGGGAAAGTTCATaGAATGTCTGGGGAGAGAACAATAGTTCATTATGG | + |
|
Preference number: 3 (lower is better) Translates to: IVWARVWPWESS*NVWGENNSSLW Trigger: CCATAATGAACTATTGTTCTCTCCCCAGACATTCCATGAACTTTCCCATGGCCATACTCTGGCCCACACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| 3UTR TCA 72 bp | AAGCCTCCAGAACTTCTGACAGATGGGCTTCAAGTTTaGGTTCACATGACCCCTTCTTTGGGTTTAATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: KPPELLTDGLQV*VHMTPSLGLIC Trigger: GCAAATTAAACCCAAAGAAGGGGTCATGTGAACTCAAACTTGAAGCCCATCTGTCAGAAGTTCTGGAGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| 3UTR CCA 72 bp | GCCAGAGTATGGCCATGGGAAAGTTCATGGAATGTCTaGGGAGAGAACAATAGTTCATTATGGCTAGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: ARVWPWESSWNV*GENNSSLWLVF Trigger: AAACACTAGCCATAATGAACTATTGTTCTCTCCCCAGACATTCCATGAACTTTCCCATGGCCATACTCTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| 3UTR TCA 72 bp | AGCCATTTTCTGCCAACCTTGGTGGCAAATGCTCTCTaGCATCATACCTCCAACAACCATGTCTTTAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: SHFLPTLVANAL*HHTSNNHVFNF Trigger: GAAATTAAAGACATGGTTGTTGGAGGTATGATGTCAGAGAGCATTTGCCACCAAGGTTGGCAGAAAATGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| 3UTR CCA 72 bp | AACATTAATAATAGGGGAATTAGGGTAAAGGGGACATaGGTGTTCTTTAAGCTTTATTTATGCTTGCAACAT | + |
|
Preference number: 3 (lower is better) Translates to: NINNRGIRVKGT*VFFKLYLCLQH Trigger: ATGTTGCAAGCATAAATAAAGCTTAAAGAACACCCATGTCCCCTTTACCCTAATTCCCCTATTATTAATGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR TCA 90 bp | GTGAGGTACTGCGGAAGGGGCTCAGAGCTTCTGTGCCCTCCCTGGGTCACCACCGCTCGCGTCCTGTGCTaGAGCTCCTTCCCGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRYCGRGSELLCPPWVTTARVLC*SSFPGE Trigger: CTCTCCCGGGAAGGAGCTTCAGCACAGGACGCGAGC...GGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCCGCAGTACCTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGGGGCTCAGAGCTTCTGTGCCCTCCCTGGGTCACCACCCTCCAGGAACCTCTTCTGTGCCCTCCCTaGGTCACCACCCTCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRGSELLCPPWVTTLQEPLLCPP*VTTLQE Trigger: TTCCTGGAGGGTGGTGACCCAGGGAGGGCACAGAAG...AGGTTCCTGGAGGGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGGCTCAGAGCTTCTGTGCCCTCCCTGGGTCACCACCCTCCAGGAACCTTTCCCACACACTAAGTaGGCAATCAGTTCTGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GRGSELLCPPWVTTLQEPFPHTK*AISSAA Trigger: CGCTGCAGAACTGATTGCTCACTTAGTGTGTGGGAA...AGGTTCCTGGAGGGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGGGGCTCAGAGCTTCTGTGCCCTCCCTGGGTCACCACCCTCCAGGAACCTGCCAGAGTATGGCCATaGGAAAGTTCATGGAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRGSELLCPPWVTTLQEPARVWP*ESSWNV Trigger: GACATTCCATGAACTTTCCCATGGCCATACTCTGGC...AGGTTCCTGGAGGGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGTCGGGAATGAGGCTGTTAAGTCCCAACCCTCTAATGGTGCCTTGGTCACGGCCCCTTTCCTGTaGCCTCAGAAAGCAGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: LEVGNEAVKSQPSNGALVTAPFL*PQKAAT Trigger: TGTCGCTGCTTTCTGAGGCCACAGGAAAGGGGCCGT...GACCAAGGCACCATTAGAGGGTTGGGACTTAACAGCCTCATTCCCGACCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | GTACTGCGGAAGGGGCTCAGAGCTTCTGTGCCCTCCCTGGGTCACCACCCTCCAGCTTTGGGGTTTTTATaGAAGCTTCATTGCGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLRKGLRASVPSLGHHPPALGFL*KLHCVG Trigger: GCCTACGCAATGAAGCTTCCATAAAAACCCCAAAGC...TGGAGGGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCCGCAGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR TCA 90 bp | ATCGTCATGTACAAGGGACAGCACCCTGAGGATATACCATATCACAGCTTGATACCACCACGCCAGACATaGGCCCGGCAGCCCAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: IVMYKGQHPEDIPYHSLIPPRQT*ARQPSG Trigger: ACCGCTGGGCTGCCGGGCTCATGTCTGGCGTGGTGG...TATCAAGCTGTGATATGGTATATCCTCAGGGTGCTGTCCCTTGTACATGACGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGTCGGGAATGAGGCTGTTAAGTCCCAACCCTCTAATGGTGCCTTGGTCCATAGGGTGAGGTACTaGGGAAGGGGCTCAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEVGNEAVKSQPSNGALVHRVRY*GRGSEL Trigger: AAGCTCTGAGCCCCTTCCGCAGTACCTCACCCTATG...GACCAAGGCACCATTAGAGGGTTGGGACTTAACAGCCTCATTCCCGACCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | ATCCCTCTCCCCTCCCTGGAGGTCGGGAATGAGGCTGTTAAGTCCCAACCCTCTGTGGAAAGAATAGTGTaGGCCAGAGTATGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: IPLPSLEVGNEAVKSQPSVERIV*ARVWPW Trigger: CCATGGCCATACTCTGGCCCACACTATTCTTTCCAC...AGAGGGTTGGGACTTAACAGCCTCATTCCCGACCTCCAGGGAGGGGAGAGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | ATCCCTCTCCCCTCCCTGGAGGTCGGGAATGAGGCTGTTAAGTCCCAACCCTCTCATCTTCAGCTCTCCTaGACCAGCCATTTTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IPLPSLEVGNEAVKSQPSHLQLS*TSHFLP Trigger: TGGCAGAAAATGGCTGGTCCAGGAGAGCTGAAGATG...AGAGGGTTGGGACTTAACAGCCTCATTCCCGACCTCCAGGGAGGGGAGAGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR TCA 90 bp | TGTGCCCTCCCTGGGTCACCACCCTCCAGGAACCTCCACATGTTCAGCTATCTGAGCCTCCAGAACTTCTaGCAGATGGGCTTCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CALPGSPPSRNLHMFSYLSLQNF*QMGFKF Trigger: AAACTTGAAGCCCATCTGTCAGAAGTTCTGGAGGCT...CAGATAGCTGAACATGTGGAGGTTCCTGGAGGGTGGTGACCCAGGGAGGGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGGCTCAGAGCTTCTGTGCCCTCCCTGGGTCACCACCCTCCAGGAACCTAATACCCAAACTTTTTaGATTGCTCTTACACCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GRGSELLCPPWVTTLQEPNTQTF*IALTPR Trigger: CCGTGGTGTAAGAGCAATGCAAAAAGTTTGGGTATT...AGGTTCCTGGAGGGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | AAGGAGATGCAAGAGGAGGGCATTACTAAGATATCTGTAGGGGGAAACTATAACCCTCGCTCGCTGTCATaGCGGCGACCGACGGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KEMQEEGITKISVGGNYNPRSLS*RRPTAP Trigger: AGGGGCCGTCGGTCGCCGCCATGACAGCGAGCGAGG...GTTATAGTTTCCCCCTACAGATATCTTAGTAATGCCCTCCTCTTGCATCTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | TGTGCCCTCCCTGGGTCACCACCCTCCAGGAACCTCCACATGTTCAGCTATCTGTGGGCTTCAAGGAACTaGAAGGATTTTGGTAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: CALPGSPPSRNLHMFSYLWASRN*KDFGRL Trigger: CAGTCTACCAAAATCCTTCCAGTTCCTTGAAGCCCA...CAGATAGCTGAACATGTGGAGGTTCCTGGAGGGTGGTGACCCAGGGAGGGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGGGGCTCAGAGCTTCTGTGCCCTCCCTGGGTCACCACCCTCCAGGAACCTAATGTCACATTCAGTTaGGGAAAATCAAGAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRGSELLCPPWVTTLQEPNVTFS*GKSRTP Trigger: TGGAGTTCTTGATTTTCCCCAACTGAATGTGACATT...AGGTTCCTGGAGGGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | ATCCCTCTCCCCTCCCTGGAGGTCGGGAATGAGGCTGTTAAGTCCCAACCCTCTCTCTATTTCTTGCTCTaGCTGGTTATTACATGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPLPSLEVGNEAVKSQPSLYFLL*LVITWV Trigger: CACCCATGTAATAACCAGCCAGAGCAAGAAATAGAG...AGAGGGTTGGGACTTAACAGCCTCATTCCCGACCTCCAGGGAGGGGAGAGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | TGTGCCCTCCCTGGGTCACCACCCTCCAGGAACCTCCACATGTTCAGCTATCTGAGTTCATGGAATGTCTaGGGAGAGAACAATAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CALPGSPPSRNLHMFSYLSSWNV*GENNSS Trigger: TGAACTATTGTTCTCTCCCCAGACATTCCATGAACT...CAGATAGCTGAACATGTGGAGGTTCCTGGAGGGTGGTGACCCAGGGAGGGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | CAGGACAAATTTGGTTCAGTAAGGAGATGCAAGAGGAGGGCATTACTAAGATATTCCCTCTCCCCTCCCTaGAGGTCGGGAATGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QDKFGSVRRCKRRALLRYSLSPP*RSGMRL Trigger: CAGCCTCATTCCCGACCTCCAGGGAGGGGAGAGGGA...ATATCTTAGTAATGCCCTCCTCTTGCATCTCCTTACTGAACCAAATTTGTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR TCA 90 bp | AAGGAGATGCAAGAGGAGGGCATTACTAAGATATCTGTAGGGGGAAACTATAACGAGGTTGCAGTGAGCTaGGATCACACCATTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: KEMQEEGITKISVGGNYNEVAVS*DHTIGT Trigger: AGTGCCAATGGTGTGATCTCAGCTCACTGCAACCTC...GTTATAGTTTCCCCCTACAGATATCTTAGTAATGCCCTCCTCTTGCATCTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGTCGGGAATGAGGCTGTTAAGTCCCAACCCTCTAATGGTGCCTTGGTCAATACAGGACAAATTTaGTTCAGTAAGGAGATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LEVGNEAVKSQPSNGALVNTGQI*FSKEMQ Trigger: TTGCATCTCCTTACTGAACCAAATTTGTCCTGTATT...GACCAAGGCACCATTAGAGGGTTGGGACTTAACAGCCTCATTCCCGACCTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| 3UTR CAA 72 bp | TGTTCAGCTATCTGGAAGCTCTCCAAACCCAGTGCTTaGGGGTTTTTATGGAAGCTTCATTGCGTAGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: CSAIWKLSKPSA*GFLWKLHCVGM Trigger: CATGCCTACGCAATGAAGCTTCCATAAAAACCCCAAAGCACTGGGTTTGGAGAGCTTCCAGATAGCTGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | CAGGACAAATTTGGTTCAGTAAGGAGATGCAAGAGGAGGGCATTACTAAGATATACAACTGGGTGCAGATaGAAGAAACTCCGCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QDKFGSVRRCKRRALLRYTTGCR*KKLRLA Trigger: AGCGAGGCGGAGTTTCTTCCATCTGCACCCAGTTGT...ATATCTTAGTAATGCCCTCCTCTTGCATCTCCTTACTGAACCAAATTTGTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | GTGGGCCAGAGTATGGCCATGGGAAAGTTCATGGAATGTCTGGGGAGAGAACAACTAGAAGAGAAGATTTaGAATGTTCCCAATGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGQSMAMGKFMECLGREQLEEKI*NVPNAK Trigger: CTTTGCATTGGGAACATTCCAAATCTTCTCTTCTAG...TTGTTCTCTCCCCAGACATTCCATGAACTTTCCCATGGCCATACTCTGGCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR TCA 90 bp | AAGGAGATGCAAGAGGAGGGCATTACTAAGATATCTGTAGGGGGAAACTATAACGTGGCAAATGCTCTCTaGCATCATACCTCCAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: KEMQEEGITKISVGGNYNVANAL*HHTSNN Trigger: GTTGTTGGAGGTATGATGTCAGAGAGCATTTGCCAC...GTTATAGTTTCCCCCTACAGATATCTTAGTAATGCCCTCCTCTTGCATCTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR GCA 90 bp | AATATTTCCATGTCCAGATGTGTGGAGTTTTCCCACACACTAAGTGAGCAATCAGGACCAGCCATTTTCTaGCAACCTTGGTGGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: NISMSRCVEFSHTLSEQSGPAIF*QPWWQM Trigger: CATTTGCCACCAAGGTTGGCAGAAAATGGCTGGTCC...TGATTGCTCACTTAGTGTGTGGGAAAACTCCACACATCTGGACATGGAAATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR GCA 90 bp | ATTTGCCAGAAAGGGTCACAGAACTTGGGGAAATACTTAACGTTTACCACTTTAGTGAGCAATCAGTTCTaGAGCGAACACCAGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ICQKGSQNLGKYLTFTTLVSNQF*SEHQLG Trigger: ACCCAGCTGGTGTTCGCTGCAGAACTGATTGCTCAC...TAAAGTGGTAAACGTTAAGTATTTCCCCAAGTTCTGTGACCCTTTCTGGCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | AAGAGTAGGTTATTAAAGGGCTCTATTTCTTGCTCTGGCTGGTTATTACATGGGCCCGATCTGCAGATGTaGAAGCTCATCTTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSRLLKGSISCSGWLLHGPDLQM*KLIFSS Trigger: AGAGCTGAAGATGAGCTTCCACATCTGCAGATCGGG...CCCATGTAATAACCAGCCAGAGCAAGAAATAGAGCCCTTTAATAACCTACTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | ATTTGCCAGAAAGGGTCACAGAACTTGGGGAAATACTTAACGTTTACCACTTTACGGTGTCATCAGTGGTaGGGGGAGAAGAGTAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ICQKGSQNLGKYLTFTTLRCHQW*GEKSRL Trigger: TAACCTACTCTTCTCCCCCCACCACTGATGACACCG...TAAAGTGGTAAACGTTAAGTATTTCCCCAAGTTCTGTGACCCTTTCTGGCAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR TCA 90 bp | CAAGTAAGACAAATACAGGACAAATTTGGTTCAGTAAGGAGATGCAAGAGGAGGGATGGGCTTCAAGTTTaGGTTCACATGACCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVRQIQDKFGSVRRCKRRDGLQV*VHMTPS Trigger: AGAAGGGGTCATGTGAACTCAAACTTGAAGCCCATC...CCTCCTCTTGCATCTCCTTACTGAACCAAATTTGTCCTGTATTTGTCTTACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | CAGGACAAATTTGGTTCAGTAAGGAGATGCAAGAGGAGGGCATTACTAAGATATCCATGGGAAAGTTCATaGAATGTCTGGGGAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QDKFGSVRRCKRRALLRYPWESS*NVWGEN Trigger: GTTCTCTCCCCAGACATTCCATGAACTTTCCCATGG...ATATCTTAGTAATGCCCTCCTCTTGCATCTCCTTACTGAACCAAATTTGTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | AGCAACCAGAGGCTGCCAGCCATCAGTCAATTATTAGCATACAAAAAGATATCAAAAATTAGCCAGGCATaGTGGTGGGCGCCTGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: SNQRLPAISQLLAYKKISKISQA*WWAPVI Trigger: AATTACAGGCGCCCACCACCATGCCTGGCTAATTTT...TGATATCTTTTTGTATGCTAATAATTGACTGATGGCTGGCAGCCTCTGGTTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| 3UTR CAA 72 bp | TTCCTTTCCTTATGCAGACTCTGTGTTCATACTTCCTaGAATCCACAAGTTGAGTACTGTCCCAACACATCC | + |
|
Preference number: 4 (lower is better) Translates to: FLSLCRLCVHTS*NPQVEYCPNTS Trigger: GGATGTGTTGGGACAGTACTCAACTTGTGGATTCAAGGAAGTATGAACACAGAGTCTGCATAAGGAAAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR GCA 90 bp | CAAGTAAGACAAATACAGGACAAATTTGGTTCAGTAAGGAGATGCAAGAGGAGGGGTTCAGTAAGGAGATaGAAGAGGAGGGCATTACTA | + |
|
Preference number: 4 (lower is better) Translates to: QVRQIQDKFGSVRRCKRRGSVRR*KRRALL Trigger: TAGTAATGCCCTCCTCTTGCATCTCCTTACTGAACC...CCTCCTCTTGCATCTCCTTACTGAACCAAATTTGTCCTGTATTTGTCTTACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | CAAGTAAGACAAATACAGGACAAATTTGGTTCAGTAAGGAGATGCAAGAGGAGGCCAAACCCAGTGCTTTaGGGTTTTTATGGAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QVRQIQDKFGSVRRCKRRPNPVL*GFYGSF Trigger: GAAGCTTCCATAAAAACCCCAAAGCACTGGGTTTGG...CCTCCTCTTGCATCTCCTTACTGAACCAAATTTGTCCTGTATTTGTCTTACTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | CAGGACAAATTTGGTTCAGTAAGGAGATGCAAGAGGAGGGCATTACTAAGATATACATGTTCAGCTATCTaGAAGCTCTCCAAACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QDKFGSVRRCKRRALLRYTCSAI*KLSKPS Trigger: ACTGGGTTTGGAGAGCTTCCAGATAGCTGAACATGT...ATATCTTAGTAATGCCCTCCTCTTGCATCTCCTTACTGAACCAAATTTGTCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| 3UTR CAA 72 bp | AGTTTGAGTTCACATGACCCCTTCTTTGGGTTTAATTaGCCAGAAAGGGTCACAGAACTTGGGGAAATACTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSSHDPFFGFN*PERVTELGEIL Trigger: AAGTATTTCCCCAAGTTCTGTGACCCTTTCTGGCAAATTAAACCCAAAGAAGGGGTCATGTGAACTCAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR TCA 90 bp | AAGGAGATGCAAGAGGAGGGCATTACTAAGATATCTGTAGGGGGAAACTATAACAATCCCTGCTTTCAATaGGTTTTACAGTCTAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KEMQEEGITKISVGGNYNNPCFQ*VLQSSR Trigger: CCTACTAGACTGTAAAACTCATTGAAAGCAGGGATT...GTTATAGTTTCCCCCTACAGATATCTTAGTAATGCCCTCCTCTTGCATCTCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR GCA 90 bp | AAGAGTAGGTTATTAAAGGGCTCTATTTCTTGCTCTGGCTGGTTATTACATGGGCCAAACTTTTTGCATTaGTCTTACACCACGGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: KSRLLKGSISCSGWLLHGPNFLH*SYTTAI Trigger: GATTGCCGTGGTGTAAGAGCAATGCAAAAAGTTTGG...CCCATGTAATAACCAGCCAGAGCAAGAAATAGAGCCCTTTAATAACCTACTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | AAGGAGATGCAAGAGGAGGGCATTACTAAGATATCTGTAGGGGGAAACTATAACAGAACTTCTGACAGATaGGCTTCAAGTTTGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KEMQEEGITKISVGGNYNRTSDR*ASSLSS Trigger: TGAACTCAAACTTGAAGCCCATCTGTCAGAAGTTCT...GTTATAGTTTCCCCCTACAGATATCTTAGTAATGCCCTCCTCTTGCATCTCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594199.3 |
||
| CDS-3UTR CCA 90 bp | ATTTGCCAGAAAGGGTCACAGAACTTGGGGAAATACTTAACGTTTACCACTTTAAAGAACCAGAGACACTaGAGAGTGAACAGACTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ICQKGSQNLGKYLTFTTLKNQRH*RVNRLE Trigger: CTCTAGTCTGTTCACTCTCCAGTGTCTCTGGTTCTT...TAAAGTGGTAAACGTTAAGTATTTCCCCAAGTTCTGTGACCCTTTCTGGCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS-3UTR GCA 90 bp | ATCGTCATGTACAAGGGACAGCACCCTGAGGATATACCATATCACAGCTTGATATTGAAAACTGATGTATaGAACTCTCAGATAGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: IVMYKGQHPEDIPYHSLILKTDV*NSQIVQ Trigger: CTGAACTATCTGAGAGTTGCATACATCAGTTTTCAA...TATCAAGCTGTGATATGGTATATCCTCAGGGTGCTGTCCCTTGTACATGACGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS-3UTR TCA 90 bp | CAGGACAAATTTGGTTCAGTAAGGAGATGCAAGAGGAGGGCATTACTAAGATATGATAAATGTTTGAGCTaGTGGATATCCCAATTACCT | + |
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Preference number: 4 (lower is better) Translates to: QDKFGSVRRCKRRALLRYDKCLS*WISQLP Trigger: AGGTAATTGGGATATCCATCAGCTCAAACATTTATC...ATATCTTAGTAATGCCCTCCTCTTGCATCTCCTTACTGAACCAAATTTGTCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS-3UTR GCA 90 bp | ATTTGCCAGAAAGGGTCACAGAACTTGGGGAAATACTTAACGTTTACCACTTTATCTTTGGGTTTAATTTaGCAGAAAGGGTCACAGAAC | + |
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Preference number: 4 (lower is better) Translates to: ICQKGSQNLGKYLTFTTLSLGLI*QKGSQN Trigger: GTTCTGTGACCCTTTCTGGCAAATTAAACCCAAAGA...TAAAGTGGTAAACGTTAAGTATTTCCCCAAGTTCTGTGACCCTTTCTGGCAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS-3UTR GCA 90 bp | AGCAACCAGAGGCTGCCAGCCATCAGTCAATTATTAGCATACAAAAAGATATCATCAACTACAGCTATCTaGAATATCAATGAGTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: SNQRLPAISQLLAYKKISSTTAI*NINESH Trigger: GTGAGACTCATTGATATTGCAGATAGCTGTAGTTGA...TGATATCTTTTTGTATGCTAATAATTGACTGATGGCTGGCAGCCTCTGGTTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS-3UTR CCA 90 bp | AGCAACCAGAGGCTGCCAGCCATCAGTCAATTATTAGCATACAAAAAGATATCAATTATGGCTAGTGTTTaGGGTTTATGTAAGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SNQRLPAISQLLAYKKISIMASV*GLCKWS Trigger: ACTCCACTTACATAAACCCCAAACACTAGCCATAAT...TGATATCTTTTTGTATGCTAATAATTGACTGATGGCTGGCAGCCTCTGGTTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS-3UTR GCA 90 bp | AGCAACCAGAGGCTGCCAGCCATCAGTCAATTATTAGCATACAAAAAGATATCAATTTTAGGAGTTGTATaGCAAGAAACAGGATCAAAG | + |
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Preference number: 4 (lower is better) Translates to: SNQRLPAISQLLAYKKISILGVV*QETGSK Trigger: CTTTGATCCTGTTTCTTGGCATACAACTCCTAAAAT...TGATATCTTTTTGTATGCTAATAATTGACTGATGGCTGGCAGCCTCTGGTTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| 3UTR CAA 72 bp | TATACCATATCACAGCTTGATAATCAACTCAGTAATTaGACCAACGTTATTGAGCACCTAGGCACAATGGAA | + |
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Preference number: 4 (lower is better) Translates to: YTISQLDNQLSN*TNVIEHLGTME Trigger: TTCCATTGTGCCTAGGTGCTCAATAACGTTGGTCAAATTACTGAGTTGATTATCAAGCTGTGATATGGTATA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS CCA 90 bp | CCGCCTCGCTCGCTGTCATGGCGGCGACCGACGGCCCCTTTCCTGTaGCCTCAGAAAGCAGCGACAGTCGCAGTCACCGGACCTTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: PPRSLSWRRPTAPFL*PQKAATVAVTGPSP Trigger: GGGCGAAGGTCCGGTGACTGCGACTGTCGCTGCTTTCTGAGGCCACAGGAAAGGGGCCGTCGGTCGCCGCCATGACAGCGAGCGAGGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000467290.1 ENST00000594199.3 |
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| CDS CCA 90 bp | GGCAGTCAGACTTCTTACATGGTTCCTCCGCCTCGCTCGCTGTCATaGCGGCGACCGACGGCCCCTTTCCTGTGGCCTCAGAAAGCAGCG | + |
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Preference number: 5 (lower is better) Translates to: GSQTSYMVPPPRSLS*RRPTAPFLWPQKAA Trigger: CGCTGCTTTCTGAGGCCACAGGAAAGGGGCCGTCGGTCGCCGCCATGACAGCGAGCGAGGCGGAGGAACCATGTAAGAAGTCTGACTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467290.1 |
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| CDS-3UTR CAA 90 bp | GTACTGCGGAAGGGGCTCAGAGCTTCTGTGCCCTCCCTGGGTCACCACCCTCCAAGGCAGGAGAATCACTaGAATCCGGGAGGTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: VLRKGLRASVPSLGHHPPRQENH*NPGGGG Trigger: ACCTCCACCTCCCGGATTCAAGTGATTCTCCTGCCT...TGGAGGGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCCGCAGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS-3UTR CAA 90 bp | GTACTGCGGAAGGGGCTCAGAGCTTCTGTGCCCTCCCTGGGTCACCACCCTCCAGATCACCTGATGAGGTaGGGAGTTCGAGACCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: VLRKGLRASVPSLGHHPPDHLMR*GVRDQP Trigger: AGGCTGGTCTCGAACTCCCAACCTCATCAGGTGATC...TGGAGGGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCCGCAGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS CCA 90 bp | ACCTCTCCATTTGATTTCTCCAGCAGGGCAGTCAGACTTCTTACATaGTTCCTCCGCCTCGCTCGCTGTCATGGCGGCGACCGACGGCCC | + |
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Preference number: 5 (lower is better) Translates to: TSPFDFSSRAVRLLT*FLRLARCHGGDRRP Trigger: GGGCCGTCGGTCGCCGCCATGACAGCGAGCGAGGCGGAGGAACCATGTAAGAAGTCTGACTGCCCTGCTGGAGAAATCAAATGGAGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467290.1 |
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| CDS-3UTR CAA 90 bp | GGAAGGGGCTCAGAGCTTCTGTGCCCTCCCTGGGTCACCACCCTCCAGGAACCTCCCTCTAATGGTGCCTaGGTCTTCCTGGTGACTAGT | + |
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Preference number: 5 (lower is better) Translates to: GRGSELLCPPWVTTLQEPPSNGA*VFLVTS Trigger: ACTAGTCACCAGGAAGACCAAGGCACCATTAGAGGG...AGGTTCCTGGAGGGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS-3UTR CAA 90 bp | CTGGAGGTCGGGAATGAGGCTGTTAAGTCCCAACCCTCTAATGGTGCCTTGGTCGCTGAGATCACACCATaGGCACTCCAGCCTGGGCAA | + |
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Preference number: 5 (lower is better) Translates to: LEVGNEAVKSQPSNGALVAEITP*ALQPGQ Trigger: TTGCCCAGGCTGGAGTGCCAATGGTGTGATCTCAGC...GACCAAGGCACCATTAGAGGGTTGGGACTTAACAGCCTCATTCCCGACCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS-3UTR CAA 90 bp | GGAAGGGGCTCAGAGCTTCTGTGCCCTCCCTGGGTCACCACCCTCCAGGAACCTGCTAGAAGAGAAGATTaGGAATGTTCCCAATGCAAA | + |
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Preference number: 5 (lower is better) Translates to: GRGSELLCPPWVTTLQEPARRED*ECSQCK Trigger: TTTGCATTGGGAACATTCCAAATCTTCTCTTCTAGC...AGGTTCCTGGAGGGTGGTGACCCAGGGAGGGCACAGAAGCTCTGAGCCCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS TCA 90 bp | GGGCAAAGCTCACTAGAGAATTCTCCTGTCCCACGTGGCATCTACTaGGGTCACTCAGTGGTATCCAGCTGGCTGGCTAGGTTGTTTTGG | + |
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Preference number: 5 (lower is better) Translates to: GQSSLENSPVPRGIY*GHSVVSSWLARLFW Trigger: CCAAAACAACCTAGCCAGCCAGCTGGATACCACTGAGTGACCTCAGTAGATGCCACGTGGGACAGGAGAATTCTCTAGTGAGCTTTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467290.1 |
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| CDS GCA 90 bp | GGCGCATTGGTGGGGATAACTGGAAAGCTGGGCTCAGCTGGGCTGTaGGTTCTCTCTCCATGTTGTCTCTTGACCTCTCCATTTGATTTC | + |
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Preference number: 5 (lower is better) Translates to: GALVGITGKLGSAGL*VLSPCCLLTSPFDF Trigger: GAAATCAAATGGAGAGGTCAAGAGACAACATGGAGAGAGAACGCACAGCCCAGCTGAGCCCAGCTTTCCAGTTATCCCCACCAATGCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467290.1 |
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| CDS CCA 90 bp | TATGTGTGGCGCATTGGTGGGGATAACTGGAAAGCTGGGCTCAGCTaGGCTGTGCGTTCTCTCTCCATGTTGTCTCTTGACCTCTCCATT | + |
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Preference number: 5 (lower is better) Translates to: YVWRIGGDNWKAGLS*AVRSLSMLSLDLSI Trigger: AATGGAGAGGTCAAGAGACAACATGGAGAGAGAACGCACAGCCCAGCTGAGCCCAGCTTTCCAGTTATCCCCACCAATGCGCCACACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467290.1 |
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| CDS TCA 90 bp | AGCTGGGCTCAGCTGGGCTGTGCGTTCTCTCTCCATGTTGTCTCTTaGCCTCTCCATTTGATTTCTCCAGCAGGGCAGTCAGACTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: SWAQLGCAFSLHVVS*PLHLISPAGQSDFL Trigger: TAAGAAGTCTGACTGCCCTGCTGGAGAAATCAAATGGAGAGGTCAAGAGACAACATGGAGAGAGAACGCACAGCCCAGCTGAGCCCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467290.1 |
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| CDS-3UTR CAA 90 bp | CTGGAGGTCGGGAATGAGGCTGTTAAGTCCCAACCCTCTAATGGTGCCTTGGTCAAAGGGCTCTATTTCTaGCTCTGGCTGGTTATTACA | + |
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Preference number: 5 (lower is better) Translates to: LEVGNEAVKSQPSNGALVKGLYF*LWLVIT Trigger: TGTAATAACCAGCCAGAGCAAGAAATAGAGCCCTTT...GACCAAGGCACCATTAGAGGGTTGGGACTTAACAGCCTCATTCCCGACCTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS CCA 90 bp | AAGCTCATCTTCAGCTCTCCTGGACCAGCCATTTTCTGCCAACCTTaGTGGCAAATGCTCTCTGACATCATACCTCCAACAACCATGTCT | + |
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Preference number: 5 (lower is better) Translates to: KLIFSSPGPAIFCQP*WQMLSDIIPPTTMS Trigger: AGACATGGTTGTTGGAGGTATGATGTCAGAGAGCATTTGCCACCAAGGTTGGCAGAAAATGGCTGGTCCAGGAGAGCTGAAGATGAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS-3UTR CAA 90 bp | ATCGTCATGTACAAGGGACAGCACCCTGAGGATATACCATATCACAGCTTGATATTCTTTGGGTTTAATTaGCCAGAAAGGGTCACAGAA | + |
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Preference number: 5 (lower is better) Translates to: IVMYKGQHPEDIPYHSLIFFGFN*PERVTE Trigger: TTCTGTGACCCTTTCTGGCAAATTAAACCCAAAGAA...TATCAAGCTGTGATATGGTATATCCTCAGGGTGCTGTCCCTTGTACATGACGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS GCA 90 bp | ACTCCATCAGATCTTTCCCTTTCCAAGTTTAACGGAAATATAACGTaGATGTATGGTTTCCACTACTTCAGTGCCCAATGTTCCAGTTAT | + |
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Preference number: 5 (lower is better) Translates to: TPSDLSLSKFNGNIT*MYGFHYFSAQCSSY Trigger: ATAACTGGAACATTGGGCACTGAAGTAGTGGAAACCATACATGCACGTTATATTTCCGTTAAACTTGGAAAGGGAAAGATCTGATGGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467290.1 |
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| CDS-3UTR CAA 90 bp | AATATTTCCATGTCCAGATGTGTGGAGTTTTCCCACACACTAAGTGAGCAATCAAAAGGGTCACAGAACTaGGGGAAATACTTAACGTTT | + |
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Preference number: 5 (lower is better) Translates to: NISMSRCVEFSHTLSEQSKGSQN*GKYLTF Trigger: AAACGTTAAGTATTTCCCCAAGTTCTGTGACCCTTT...TGATTGCTCACTTAGTGTGTGGGAAAACTCCACACATCTGGACATGGAAATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS-3UTR CAA 90 bp | AAGAGTAGGTTATTAAAGGGCTCTATTTCTTGCTCTGGCTGGTTATTACATGGGAATCAACTCAGTAATTaGACCAACGTTATTGAGCAC | + |
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Preference number: 5 (lower is better) Translates to: KSRLLKGSISCSGWLLHGNQLSN*TNVIEH Trigger: GTGCTCAATAACGTTGGTCAAATTACTGAGTTGATT...CCCATGTAATAACCAGCCAGAGCAAGAAATAGAGCCCTTTAATAACCTACTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS-3UTR CAA 90 bp | AGCAACCAGAGGCTGCCAGCCATCAGTCAATTATTAGCATACAAAAAGATATCACTCAAAATTCCAGAGTaGAAACAAATGGTACAGTTG | + |
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Preference number: 5 (lower is better) Translates to: SNQRLPAISQLLAYKKISLKIPE*KQMVQL Trigger: CAACTGTACCATTTGTTTCAACTCTGGAATTTTGAG...TGATATCTTTTTGTATGCTAATAATTGACTGATGGCTGGCAGCCTCTGGTTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS CCA 72 bp | TCGCTGTCATGGCGGCGACCGACGGCCCCTTTCCTGTaGCCTCAGAAAGCAGCGACAGTCGCAGTCACCGGA | + |
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Preference number: 6 (lower is better) Translates to: SLSWRRPTAPFL*PQKAATVAVTG Trigger: TCCGGTGACTGCGACTGTCGCTGCTTTCTGAGGCCACAGGAAAGGGGCCGTCGGTCGCCGCCATGACAGCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000467290.1 ENST00000594199.3 |
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| CDS CCA 72 bp | GTGCAGATGGAAGAAACTCCGCCTCGCTCGCTGTCATaGCGGCGACCGACGGCCCCTTTCCTGTGGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: VQMEETPPRSLS*RRPTAPFLWPQ Trigger: CTGAGGCCACAGGAAAGGGGCCGTCGGTCGCCGCCATGACAGCGAGCGAGGCGGAGTTTCTTCCATCTGCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594199.3 |
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| CDS CCA 72 bp | ACTTCTTACATGGTTCCTCCGCCTCGCTCGCTGTCATaGCGGCGACCGACGGCCCCTTTCCTGTGGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: TSYMVPPPRSLS*RRPTAPFLWPQ Trigger: CTGAGGCCACAGGAAAGGGGCCGTCGGTCGCCGCCATGACAGCGAGCGAGGCGGAGGAACCATGTAAGAAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467290.1 |
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| CDS CCA 72 bp | TTTGATTTCTCCAGCAGGGCAGTCAGACTTCTTACATaGTTCCTCCGCCTCGCTCGCTGTCATGGCGGCGAC | + |
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Preference number: 6 (lower is better) Translates to: FDFSSRAVRLLT*FLRLARCHGGD Trigger: GTCGCCGCCATGACAGCGAGCGAGGCGGAGGAACCATGTAAGAAGTCTGACTGCCCTGCTGGAGAAATCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467290.1 |
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| CDS CCA 72 bp | CTTCCGTCATATGTGTGGCGCATTGGTGGGGATAACTaGAAAGCTGGGCTCAGCTGGGCTGTGCGTTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LPSYVWRIGGDN*KAGLSWAVRSL Trigger: GAGAGAACGCACAGCCCAGCTGAGCCCAGCTTTCCAGTTATCCCCACCAATGCGCCACACATATGACGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467290.1 |
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| CDS GCA 72 bp | GTGGGGATAACTGGAAAGCTGGGCTCAGCTGGGCTGTaGGTTCTCTCTCCATGTTGTCTCTTGACCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VGITGKLGSAGL*VLSPCCLLTSP Trigger: TGGAGAGGTCAAGAGACAACATGGAGAGAGAACGCACAGCCCAGCTGAGCCCAGCTTTCCAGTTATCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467290.1 |
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| CDS TCA 72 bp | TCACTAGAGAATTCTCCTGTCCCACGTGGCATCTACTaGGGTCACTCAGTGGTATCCAGCTGGCTGGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: SLENSPVPRGIY*GHSVVSSWLAR Trigger: CCTAGCCAGCCAGCTGGATACCACTGAGTGACCTCAGTAGATGCCACGTGGGACAGGAGAATTCTCTAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467290.1 |
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| CDS CAA 72 bp | AGGGACCAAAATGACTTCCGTCATATGTGTGGCGCATaGGTGGGGATAACTGGAAAGCTGGGCTCAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RDQNDFRHMCGA*VGITGKLGSAG Trigger: CCCAGCTGAGCCCAGCTTTCCAGTTATCCCCACCAATGCGCCACACATATGACGGAAGTCATTTTGGTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467290.1 |
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| CDS CAA 72 bp | TCAGCTGGGCTGTGCGTTCTCTCTCCATGTTGTCTCTaGACCTCTCCATTTGATTTCTCCAGCAGGGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: SAGLCVLSPCCL*TSPFDFSSRAV Trigger: GACTGCCCTGCTGGAGAAATCAAATGGAGAGGTCAAGAGACAACATGGAGAGAGAACGCACAGCCCAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467290.1 |
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| CDS CAA 90 bp | AAGCTGGGCTCAGCTGGGCTGTGCGTTCTCTCTCCATGTTGTCTCTaGACCTCTCCATTTGATTTCTCCAGCAGGGCAGTCAGACTTCTT | + |
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Preference number: 6 (lower is better) Translates to: KLGSAGLCVLSPCCL*TSPFDFSSRAVRLL Trigger: AAGAAGTCTGACTGCCCTGCTGGAGAAATCAAATGGAGAGGTCAAGAGACAACATGGAGAGAGAACGCACAGCCCAGCTGAGCCCAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467290.1 |
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| CDS CCA 72 bp | CACTCAGTGGTATCCAGCTGGCTGGCTAGGTTGTTTTaGAGGGACCAAAATGACTTCCGTCATATGTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: HSVVSSWLARLF*RDQNDFRHMCG Trigger: GCCACACATATGACGGAAGTCATTTTGGTCCCTCCAAAACAACCTAGCCAGCCAGCTGGATACCACTGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467290.1 |
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