RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC25A46 (Homo sapiens)

Ensembl gene IDs: ENSG00000164209

Ensembl transcript IDs: ENST00000355943.8, ENST00000447245.6, ENST00000502462.6, ENST00000504098.1, ENST00000508781.5, ENST00000509432.1, ENST00000513706.2, ENST00000513807.5

Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGCTTTGTGCAGTTTTAACAAAGCTGCTGCTAAAAAGACAGTTGTaGGTGGTCAGGTATATCTGCAATAGTAAGCAAGTTCTTACCTTT +
Preference number: 1 (lower is better)
Translates to: MLCAVLTKLLLKRQL*VVRYICNSKQVLTF
Trigger: AAAGGTAAGAACTTGCTTACTATTGCAGATATACCTGACCACTCACAACTGTCTTTTTAGCAGCAGCTTTGTTAAAACTGCACAAAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355943.8
3UTR-3UTR CCA 90 bp CTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAAACCACTGGGTTTGGATATaGACAAGGATGTTGTCTCTG +
Preference number: 2 (lower is better)
Translates to: LNSGSKNSPMIHTTSKANHWVWI*TRMLSL
Trigger: CAGAGACAACATCCTTGTCCATATCCAAACCCAGTG...GTTTGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
3UTR-3UTR CCA 90 bp TCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCACTAGCACTGAAACACTaGGTTTGGATATGGACAAGG +
Preference number: 2 (lower is better)
Translates to: SLNSGSKNSPMIHTTSKALALKH*VWIWTR
Trigger: CCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG...TGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
3UTR CAA 90 bp AAGTTGCTAGCACTGAAACACTGGGTTTGGATATGGACAAGGATGTaGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATATTT +
Preference number: 2 (lower is better)
Translates to: KLLALKHWVWIWTRM*SLTCIFWVPWFLIF
Trigger: AAATATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAGCAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
3UTR-3UTR GCA 90 bp TCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAAAACATTTATACTCCTaGTTACAGATTGCCAAGTCT +
Preference number: 2 (lower is better)
Translates to: SLNSGSKNSPMIHTTSKAKHLYS*LQIAKS
Trigger: AGACTTGGCAATCTGTAAGCAGGAGTATAAATGTTT...TGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
3UTR-3UTR GCA 90 bp TTCTCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAAAACATTTATACTCCTaGTTACAGATTGCCAAGTCT +
Preference number: 2 (lower is better)
Translates to: FSLNSGSKNSPMIHTTSKKHLYS*LQIAKS
Trigger: AGACTTGGCAATCTGTAAGCAGGAGTATAAATGTTT...TTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGAGAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
3UTR-3UTR CCA 90 bp TTCTCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAACTGACTTGTATCTTTTaGGTACCTTGGTTTTTGATA +
Preference number: 2 (lower is better)
Translates to: FSLNSGSKNSPMIHTTSKLTCIF*VPWFLI
Trigger: TATCAAAAACCAAGGTACCCAAAAGATACAAGTCAG...TTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
3UTR CCA 72 bp ACCCTACAATGTAAGGCAAGTGTATCACAAGCTCCATaGCCAAAATTTGGCTTATATAAGAGGACCAGTGGG +
Preference number: 3 (lower is better)
Translates to: TLQCKASVSQAP*PKFGLYKRTSG
Trigger: CCCACTGGTCCTCTTATATAAGCCAAATTTTGGCCATGGAGCTTGTGATACACTTGCCTTACATTGTAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355943.8
3UTR-3UTR CAA 90 bp CTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAAACACTCCTGCTTACAGATaGCCAAGTCTAATCATCCCT +
Preference number: 3 (lower is better)
Translates to: LNSGSKNSPMIHTTSKANTPAYR*PSLIIP
Trigger: AGGGATGATTAGACTTGGCAATCTGTAAGCAGGAGT...GTTTGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
3UTR-3UTR CAA 90 bp TTCTCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAACTCCTGCTTACAGATaGCCAAGTCTAATCATCCCT +
Preference number: 3 (lower is better)
Translates to: FSLNSGSKNSPMIHTTSKTPAYR*PSLIIP
Trigger: AGGGATGATTAGACTTGGCAATCTGTAAGCAGGAGT...TTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
3UTR-3UTR CAA 90 bp TCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAGATGTTGTCTCTGACTaGTATCTTTTGGGTACCTTG +
Preference number: 3 (lower is better)
Translates to: SLNSGSKNSPMIHTTSKADVVSD*YLLGTL
Trigger: CAAGGTACCCAAAAGATACAAGTCAGAGACAACATC...TGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
3UTR CCA 72 bp ATTAAGTTGCTAGCACTGAAACACTGGGTTTGGATATaGACAAGGATGTTGTCTCTGACTTGTATCTTTTGG +
Preference number: 3 (lower is better)
Translates to: IKLLALKHWVWI*TRMLSLTCIFW
Trigger: CCAAAAGATACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAGCAACTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
3UTR-3UTR CAA 90 bp TTCTCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAATATGGACAAGGATGTaGTCTCTGACTTGTATCTTT +
Preference number: 3 (lower is better)
Translates to: FSLNSGSKNSPMIHTTSKIWTRM*SLTCIF
Trigger: AAAGATACAAGTCAGAGACAACATCCTTGTCCATAT...TTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
3UTR TCA 72 bp AGTGCAACATATTTGGCTAGCTTAAATTTAAGTGCGTaGCCGTTCAAGATTTTGTTTCAACTAATTTGGAGT +
Preference number: 3 (lower is better)
Translates to: SATYLASLNLSA*PFKILFQLIWS
Trigger: ACTCCAAATTAGTTGAAACAAAATCTTGAACGGTCACGCACTTAAATTTAAGCTAGCCAAATATGTTGCACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR GCA 90 bp CTAGCACTGAAACACTGGGTTTGGATATGGACAAGGATGTTGTCTCTGACTTGTTCTGCCCCTGCACACTaGCGCCGCCGCCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: LALKHWVWIWTRMLSLTCSAPAH*RRRHWK
Trigger: TTTCCAGTGGCGGCGGCGGCAGTGTGCAGGGGCAGA...ACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR CCA 90 bp TTCTCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAACGGGGTGGAGGTGGTaGGCACGCCGTAGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: FSLNSGSKNSPMIHTTSKTGWRW*ARRRAG
Trigger: GCCCGCCCTACGGCGTGCCCACCACCTCCACCCCGT...TTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR GCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAGCGCCGCCAAAGCCCTaGTCGTCCCGGGCACCACCC +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSAPPKP*SSRAPP
Trigger: GGGTGGTGCCCGGGACGAGCAGGGCTTTGGCGGCGC...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR GCA 90 bp CTAGCACTGAAACACTGGGTTTGGATATGGACAAGGATGTTGTCTCTGACTTGTAGCTGTTCACTGCTCTaGCCCTGCACACTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LALKHWVWIWTRMLSLTCSCSLL*PCTLPP
Trigger: CGGCGGCAGTGTGCAGGGGCAGAGCAGTGAACAGCT...ACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR GCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATATCCGGGCGCCGCGGATaGATCGCAGCGGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFISGRRG*IAAGAG
Trigger: TCCTGCCCCCGCTGCGATGCATCCGCGGCGCCCGGA...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR CCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATAACGGGGTGGAGGTGGTaGGCACGCCGTAGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFITGWRW*ARRRAG
Trigger: GCCCGCCCTACGGCGTGCCCACCACCTCCACCCCGT...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR CCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCACGTACGGGGTGGAGGTaGTGGGCACGCCGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSRTGWR*WARRRA
Trigger: CGCCCTACGGCGTGCCCACCACCTCCACCCCGTACG...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR CCA 90 bp TGGACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATAGGCCTTCGTACGGGGTaGAGGTGGTGGGCACGCCGT +
Preference number: 4 (lower is better)
Translates to: WTRMLSLTCIFWVPWFLIGLRTG*RWWARR
Trigger: ACGGCGTGCCCACCACCTCCACCCCGTACGAAGGCC...TATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR TCA 90 bp TGGACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATAGGTCCGACCCGGTGCTaGAGGACCTTGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: WTRMLSLTCIFWVPWFLIGPTRC*RTLQGR
Trigger: CCTTCCCTGCAAGGTCCTTCAGCACCGGGTCGGACC...TATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR CCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAGGAGTCGTCACCCAGTaGCCCAGGTCCGACCCGGTG +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSGVVTQ*PRSDPV
Trigger: CACCGGGTCGGACCTGGGCCACTGGGTGACGACTCC...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR CCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAGGCCTTCGTACGGGGTaGAGGTGGTGGGCACGCCGT +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSGLRTG*RWWARR
Trigger: ACGGCGTGCCCACCACCTCCACCCCGTACGAAGGCC...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR CCA 90 bp TTCTCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAATGCCGCCGCCGCCACTaGAAAAGGGTTCCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: FSLNSGSKNSPMIHTTSKCRRRH*KRVPPW
Trigger: CCACGGAGGAACCCTTTTCCAGTGGCGGCGGCGGCA...TTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR GCA 90 bp TTCTCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAAGTGCAGGTTGCGGCTaGCGGGGATATCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: FSLNSGSKNSPMIHTTSKSAGCG*RGYLGE
Trigger: CTCCCCCAGATATCCCCGGCAGCCGCAACCTGCACT...TTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR GCA 90 bp AAACATTTATACTCCTGCTTACAGATTGCCAAGTCTAATCATCCCTTAAGTCTTCTCTTCTCGCCCCAGTaGAGGTTGCGGCTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: KHLYSCLQIAKSNHPLSLLFSPQ*RLRLPG
Trigger: CCCCGGCAGCCGCAACCTGCACTGGGGCGAGAAGAG...AAGACTTAAGGGATGATTAGACTTGGCAATCTGTAAGCAGGAGTATAAATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR GCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATACTCTTCTCGCCCCAGTaGAGGTTGCGGCTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFILFSPQ*RLRLPG
Trigger: CCCCGGCAGCCGCAACCTGCACTGGGGCGAGAAGAG...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR GCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATCTGCCCCTGCACACTaGCGCCGCCGCCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSSAPAH*RRRHWK
Trigger: TTTCCAGTGGCGGCGGCGGCAGTGTGCAGGGGCAGA...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR GCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATATCACTGCTCTGCCCCTaGACACTGCCGCCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFISLLCP*TLPPPP
Trigger: TGGCGGCGGCGGCAGTGTGCAGGGGCAGAGCAGTGA...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR CCA 90 bp TGGACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATAGCTGCCGGGGATATCTaGGGGAGTCGTCACCCAGTG +
Preference number: 4 (lower is better)
Translates to: WTRMLSLTCIFWVPWFLIAAGDI*GSRHPV
Trigger: CACTGGGTGACGACTCCCCCAGATATCCCCGGCAGC...TATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR CCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATGCCGCCGCCGCCACTaGAAAAGGGTTCCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSCRRRH*KRVPPW
Trigger: CCACGGAGGAACCCTTTTCCAGTGGCGGCGGCGGCA...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR TCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATAGGTCCGACCCGGTGCTaGAGGACCTTGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFIGPTRC*RTLQGR
Trigger: CCTTCCCTGCAAGGTCCTTCAGCACCGGGTCGGACC...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR GCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATACGCCCCAGTGCAGGTTaGGGCTGCCGGGGATATCTG +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFIRPSAG*GCRGYL
Trigger: CAGATATCCCCGGCAGCCGCAACCTGCACTGGGGCG...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR GCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAAGCTGTTCACTGCTCTaGCCCTGCACACTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSSCSLL*PCTLPP
Trigger: CGGCGGCAGTGTGCAGGGGCAGAGCAGTGAACAGCT...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR CCA 90 bp TGGACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATAAAAAGGGTTCCTCCGTaGGGCCTTCGTACGGGGTGG +
Preference number: 4 (lower is better)
Translates to: WTRMLSLTCIFWVPWFLIKRVPP*GLRTGW
Trigger: CCACCCCGTACGAAGGCCCCACGGAGGAACCCTTTT...TATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR TCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATAGCTGGAATGTCCCACTaGGGGAGCCAGCAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFIAGMSH*GSQQAG
Trigger: CCCAGCTTGCTGGCTCCCTCAGTGGGACATTCCAGC...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509432.1
CDS-3UTR GCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATAAGTGCAGGTTGCGGCTaGCGGGGATATCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFISAGCG*RGYLGE
Trigger: CTCCCCCAGATATCCCCGGCAGCCGCAACCTGCACT...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR GCA 90 bp CTAGCACTGAAACACTGGGTTTGGATATGGACAAGGATGTTGTCTCTGACTTGTGCATCCAACATACTCTaGACAGGGCTAGTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LALKHWVWIWTRMLSLTCASNIL*TGLVLS
Trigger: TGAGAGCACTAGCCCTGTGCAGAGTATGTTGGATGC...ACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATAGCTGCCGGGGATATCTaGGGGAGTCGTCACCCAGTG +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFIAAGDI*GSRHPV
Trigger: CACTGGGTGACGACTCCCCCAGATATCCCCGGCAGC...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
3UTR CAA 72 bp GTAAGGCAAGTGTATCACAAGCTCCATGGCCAAAATTaGGCTTATATAAGAGGACCAGTGGGCCTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: VRQVYHKLHGQN*AYIRGPVGLWN
Trigger: GTTCCACAGGCCCACTGGTCCTCTTATATAAGCCAAATTTTGGCCATGGAGCTTGTGATACACTTGCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR TCA 90 bp CTAGCACTGAAACACTGGGTTTGGATATGGACAAGGATGTTGTCTCTGACTTGTAGGGCTCTAGGTCCCTaGGTTTTGTTGAAACTGTAC +
Preference number: 4 (lower is better)
Translates to: LALKHWVWIWTRMLSLTCRALGP*VLLKLY
Trigger: GTACAGTTTCAACAAAACTCAGGGACCTAGAGCCCT...ACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATAGGTGCTGAAGGACCTTaGAGGGAAGGCGCCGCCAAA +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFIGAEGP*REGAAK
Trigger: TTTGGCGGCGCCTTCCCTGCAAGGTCCTTCAGCACC...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR GCA 90 bp TCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCATATTCAGCTGTTCACTaGTCTGCCCCTGCACACTGC +
Preference number: 4 (lower is better)
Translates to: SLNSGSKNSPMIHTTSKAYSAVH*SAPAHC
Trigger: GCAGTGTGCAGGGGCAGAGCAGTGAACAGCTGAATA...TGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR GCA 90 bp CTAGCACTGAAACACTGGGTTTGGATATGGACAAGGATGTTGTCTCTGACTTGTGGCGGCGTAGAACAATaGAAGGATGTGCCAATACAT +
Preference number: 4 (lower is better)
Translates to: LALKHWVWIWTRMLSLTCGGVEQ*KDVPIH
Trigger: ATGTATTGGCACATCCTTGCATTGTTCTACGCCGCC...ACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATAAAAAGGGTTCCTCCGTaGGGCCTTCGTACGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFIKRVPP*GLRTGW
Trigger: CCACCCCGTACGAAGGCCCCACGGAGGAACCCTTTT...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR TCA 90 bp CTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAAACAGAAGTCGTTTGCTATaGGGCACTCCCATGCCTATC +
Preference number: 4 (lower is better)
Translates to: LNSGSKNSPMIHTTSKANRSRLL*GTPMPI
Trigger: GATAGGCATGGGAGTGCCTCATAGCAAACGACTTCT...GTTTGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp TGGACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATAGCGGAAGAAGTCGTTTaGTATGAGGCACTCCCATGC +
Preference number: 4 (lower is better)
Translates to: WTRMLSLTCIFWVPWFLIAEEVV*YEALPC
Trigger: GCATGGGAGTGCCTCATAGCAAACGACTTCTTCCGC...TATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAGCTGATAGAAGGGGCTaGCAGAGAAGCAAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSADRRG*QRSKRH
Trigger: GTGCCTCTTGCTTCTCTGCCAGCCCCTTCTATCAGC...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509432.1
CDS-3UTR TCA 90 bp CTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAAACAGGGCTCTAGGTCCCTaGGTTTTGTTGAAACTGTAC +
Preference number: 4 (lower is better)
Translates to: LNSGSKNSPMIHTTSKANRALGP*VLLKLY
Trigger: GTACAGTTTCAACAAAACTCAGGGACCTAGAGCCCT...GTTTGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp CTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAAACGGCGGCGTAGAACAATaGAAGGATGTGCCAATACAT +
Preference number: 4 (lower is better)
Translates to: LNSGSKNSPMIHTTSKANGGVEQ*KDVPIH
Trigger: ATGTATTGGCACATCCTTGCATTGTTCTACGCCGCC...GTTTGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp GACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATATTGCGGAAGAAGTCGTTTaGTATGAGGCACTCCCATGC +
Preference number: 4 (lower is better)
Translates to: DKDVVSDLYLLGTLVFDIAEEVV*YEALPC
Trigger: GCATGGGAGTGCCTCATAGCAAACGACTTCTTCCGC...AATATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp TGGACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATAGCATCCAACATACTCTaGACAGGGCTAGTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: WTRMLSLTCIFWVPWFLIASNIL*TGLVLS
Trigger: TGAGAGCACTAGCCCTGTGCAGAGTATGTTGGATGC...TATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp CTAGCACTGAAACACTGGGTTTGGATATGGACAAGGATGTTGTCTCTGACTTGTAACACTCCTTCCTCCTaGCTTATGGTATTGATACAG +
Preference number: 4 (lower is better)
Translates to: LALKHWVWIWTRMLSLTCNTPSS*LMVLIQ
Trigger: CTGTATCAATACCATAAGGCAGGAGGAAGGAGTGTT...ACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CCA 90 bp CTAGCACTGAAACACTGGGTTTGGATATGGACAAGGATGTTGTCTCTGACTTGTCTGAAACACTGGGTTTaGATATGGACAAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: LALKHWVWIWTRMLSLTCLKHWV*IWTRML
Trigger: CAACATCCTTGTCCATATCCAAACCCAGTGTTTCAG...ACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CCA 90 bp TCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCATGCCACATTAGAGTGTaGGCCCAGGGTTTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: SLNSGSKNSPMIHTTSKACHIRV*AQGFEV
Trigger: AACTTCAAAACCCTGGGCCCACACTCTAATGTGGCA...TGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504098.1
3UTR CAA 72 bp GCACTGAAACACTGGGTTTGGATATGGACAAGGATGTaGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: ALKHWVWIWTRM*SLTCIFWVPWF
Trigger: AAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR TCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAAGAAGTCGTTTGCTATaGGGCACTCCCATGCCTATC +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSRSRLL*GTPMPI
Trigger: GATAGGCATGGGAGTGCCTCATAGCAAACGACTTCT...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR TCA 90 bp CTAGCACTGAAACACTGGGTTTGGATATGGACAAGGATGTTGTCTCTGACTTGTCTAAAAACAGCCCAATaGTTCACACAACTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: LALKHWVWIWTRMLSLTCLKTAQ*FTQLAK
Trigger: CTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAG...ACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR TCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATACTCCCTCCCCAGATCTaGGGAAGACTTCCATGGTTT +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFILPPQI*GRLPWF
Trigger: AAACCATGGAAGTCTTCCTCAGATCTGGGGAGGGAG...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513807.5
CDS-3UTR GCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATATATTCAGCTGTTCACTaGTCTGCCCCTGCACACTGC +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFIYSAVH*SAPAHC
Trigger: GCAGTGTGCAGGGGCAGAGCAGTGAACAGCTGAATA...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR GCA 90 bp TCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAACTAATTATGCCTTCTaGTCCAAGTGTGACTCCCTG +
Preference number: 4 (lower is better)
Translates to: SLNSGSKNSPMIHTTSKATNYAF*SKCDSL
Trigger: CAGGGAGTCACACTTGGAGCAGAAGGCATAATTAGT...TGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATAGCGGAAGAAGTCGTTTaGTATGAGGCACTCCCATGC +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFIAEEVV*YEALPC
Trigger: GCATGGGAGTGCCTCATAGCAAACGACTTCTTCCGC...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR GCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAGCATCCAACATACTCTaGACAGGGCTAGTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSASNIL*TGLVLS
Trigger: TGAGAGCACTAGCCCTGTGCAGAGTATGTTGGATGC...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR GCA 90 bp TCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAATGAATGAAGGACTCTaGTGGGGTCTGTGGCAAATT +
Preference number: 4 (lower is better)
Translates to: SLNSGSKNSPMIHTTSKAMNEGL*WGLWQI
Trigger: AATTTGCCACAGACCCCAGCAGAGTCCTTCATTCAT...TGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504098.1
CDS-3UTR CCA 90 bp CTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAAACCCAAGTGTGACTCCCTaGACAATAAATGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: LNSGSKNSPMIHTTSKANPSVTP*TINVLP
Trigger: GGGAAGTACATTTATTGTCCAGGGAGTCACACTTGG...GTTTGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CCA 90 bp CTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAAACCTAGCACTGAAACACTaGGTTTGGATATGGACAAGG +
Preference number: 4 (lower is better)
Translates to: LNSGSKNSPMIHTTSKANLALKH*VWIWTR
Trigger: CCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG...GTTTGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CCA 90 bp TTCTCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAAATGAAGGACTCTGCTaGGGTCTGTGGCAAATTGCA +
Preference number: 4 (lower is better)
Translates to: FSLNSGSKNSPMIHTTSKNEGLC*GLWQIA
Trigger: TGCAATTTGCCACAGACCCCAGCAGAGTCCTTCATT...TTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504098.1
CDS-3UTR CCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAAGGGAGCCAGCAAGCTaGGGGATTTCCAATTCACAA +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSREPAS*GISNSQ
Trigger: TTGTGAATTGGAAATCCCCCAGCTTGCTGGCTCCCT...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509432.1
CDS-3UTR TCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAAGGGCTCTAGGTCCCTaGGTTTTGTTGAAACTGTAC +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSRALGP*VLLKLY
Trigger: GTACAGTTTCAACAAAACTCAGGGACCTAGAGCCCT...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000513807.5
CDS-3UTR TCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATAAGAAGTCGTTTGCTATaGGGCACTCCCATGCCTATC +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFIRSRLL*GTPMPI
Trigger: GATAGGCATGGGAGTGCCTCATAGCAAACGACTTCT...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR TCA 90 bp TGGACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATACCTGCCTTATGGTATTaGTACAGTCTCTCATTCCCT +
Preference number: 4 (lower is better)
Translates to: WTRMLSLTCIFWVPWFLIPALWY*YSLSFP
Trigger: AGGGAATGAGAGACTGTATCAATACCATAAGGCAGG...TATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAGGCGGCGTAGAACAATaGAAGGATGTGCCAATACAT +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSGGVEQ*KDVPIH
Trigger: ATGTATTGGCACATCCTTGCATTGTTCTACGCCGCC...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000513807.5
CDS-3UTR GCA 90 bp CTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAAACAACACTCCTTCCTCCTaGCTTATGGTATTGATACAG +
Preference number: 4 (lower is better)
Translates to: LNSGSKNSPMIHTTSKANNTPSS*LMVLIQ
Trigger: CTGTATCAATACCATAAGGCAGGAGGAAGGAGTGTT...GTTTGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp TCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAGTTGGACAATATCAGTaGAAAGTCACTGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SLNSGSKNSPMIHTTSKAVGQYQ*KVTVLQ
Trigger: CTGAAGCACAGTGACTTTGCACTGATATTGTCCAAC...TGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR GCA 90 bp TGGACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATAACTCCAATTCATTGTTaGCACATTAGAGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: WTRMLSLTCIFWVPWFLITPIHC*HIRVWA
Trigger: GGCCCACACTCTAATGTGGCAACAATGAATTGGAGT...TATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504098.1
CDS-3UTR CCA 90 bp CTAGCACTGAAACACTGGGTTTGGATATGGACAAGGATGTTGTCTCTGACTTGTATTGATGACTGTAAATaGAGTGAGATGGTAATGCTG +
Preference number: 4 (lower is better)
Translates to: LALKHWVWIWTRMLSLTCIDDCK*SEMVML
Trigger: CAGCATTACCATCTCACTCCATTTACAGTCATCAAT...ACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CCA 90 bp CTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAAACCTGAAACACTGGGTTTaGATATGGACAAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: LNSGSKNSPMIHTTSKANLKHWV*IWTRML
Trigger: CAACATCCTTGTCCATATCCAAACCCAGTGTTTCAG...GTTTGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR TCA 90 bp CTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAAACAGTAGGACAAACTTCTaGATAACTGAGCTGATGATG +
Preference number: 4 (lower is better)
Translates to: LNSGSKNSPMIHTTSKANSRTNF*ITELMM
Trigger: CATCATCAGCTCAGTTATTCAGAAGTTTGTCCTACT...GTTTGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR TCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCACCTGCCTTATGGTATTaGTACAGTCTCTCATTCCCT +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSPALWY*YSLSFP
Trigger: AGGGAATGAGAGACTGTATCAATACCATAAGGCAGG...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR GCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATAGGCGGCGTAGAACAATaGAAGGATGTGCCAATACAT +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFIGGVEQ*KDVPIH
Trigger: ATGTATTGGCACATCCTTGCATTGTTCTACGCCGCC...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000513807.5
CDS-3UTR GCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAACTAATTATGCCTTCTaGTCCAAGTGTGACTCCCTG +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSTNYAF*SKCDSL
Trigger: CAGGGAGTCACACTTGGAGCAGAAGGCATAATTAGT...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000513807.5
CDS-3UTR CCA 90 bp GACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATATTCCAAGTGTGACTCCCTaGACAATAAATGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: DKDVVSDLYLLGTLVFDIPSVTP*TINVLP
Trigger: GGGAAGTACATTTATTGTCCAGGGAGTCACACTTGG...AATATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCACCAAGTGTGACTCCCTaGACAATAAATGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSPSVTP*TINVLP
Trigger: GGGAAGTACATTTATTGTCCAGGGAGTCACACTTGG...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000513807.5
CDS-3UTR CCA 90 bp CTAGCACTGAAACACTGGGTTTGGATATGGACAAGGATGTTGTCTCTGACTTGTCTGACTTGTATCTTTTaGGTACCTTGGTTTTTGATA +
Preference number: 4 (lower is better)
Translates to: LALKHWVWIWTRMLSLTCLTCIF*VPWFLI
Trigger: TATCAAAAACCAAGGTACCCAAAAGATACAAGTCAG...ACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATATTATGGGCCAGGTCCTaGCAAGTAGTGGTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFILWARS*QVVVFK
Trigger: CTTGAAAACCACTACTTGCCAGGACCTGGCCCATAA...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509432.1
CDS-3UTR TCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATACCTGCCTTATGGTATTaGTACAGTCTCTCATTCCCT +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFIPALWY*YSLSFP
Trigger: AGGGAATGAGAGACTGTATCAATACCATAAGGCAGG...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR TCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCACAAGGATGTTGTCTCTaGCTTGTATCTTTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSQGCCL*LVSFGY
Trigger: GTACCCAAAAGATACAAGTCAGAGACAACATCCTTG...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR TCA 90 bp TGGACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATACTAAAAACAGCCCAATaGTTCACACAACTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: WTRMLSLTCIFWVPWFLILKTAQ*FTQLAK
Trigger: CTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAG...TATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATAACTAATTATGCCTTCTaGTCCAAGTGTGACTCCCTG +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFITNYAF*SKCDSL
Trigger: CAGGGAGTCACACTTGGAGCAGAAGGCATAATTAGT...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000513807.5
CDS-3UTR GCA 90 bp TCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCACGAATTATCTCACTCTaGACTGTTTCAATCAGACTT +
Preference number: 4 (lower is better)
Translates to: SLNSGSKNSPMIHTTSKARIISL*TVSIRL
Trigger: AAGTCTGATTGAAACAGTGCAGAGTGAGATAATTCG...TGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp CTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAAACCGAATTATCTCACTCTaGACTGTTTCAATCAGACTT +
Preference number: 4 (lower is better)
Translates to: LNSGSKNSPMIHTTSKANRIISL*TVSIRL
Trigger: AAGTCTGATTGAAACAGTGCAGAGTGAGATAATTCG...GTTTGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAAACACTCCTTCCTCCTaGCTTATGGTATTGATACAG +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSNTPSS*LMVLIQ
Trigger: CTGTATCAATACCATAAGGCAGGAGGAAGGAGTGTT...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR GCA 90 bp CTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAAACGGTGATAAGAATAATTaGTTTTCCCTCCACGTACAT +
Preference number: 4 (lower is better)
Translates to: LNSGSKNSPMIHTTSKANGDKNN*FSLHVH
Trigger: ATGTACGTGGAGGGAAAAGCAATTATTCTTATCACC...GTTTGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR GCA 90 bp AAACATTTATACTCCTGCTTACAGATTGCCAAGTCTAATCATCCCTTAAGTCTTAGTGCAAAGTCACTGTaGTTCAGAGCGCTAAATGGT +
Preference number: 4 (lower is better)
Translates to: KHLYSCLQIAKSNHPLSLSAKSL*FRALNG
Trigger: ACCATTTAGCGCTCTGAAGCACAGTGACTTTGCACT...AAGACTTAAGGGATGATTAGACTTGGCAATCTGTAAGCAGGAGTATAAATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR GCA 90 bp TCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAGTGGTCAGGTATATCTaGAATAGTAAGCAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: SLNSGSKNSPMIHTTSKAVVRYI*NSKQVL
Trigger: AAGAACTTGCTTACTATTGCAGATATACCTGACCAC...TGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR CCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATACCAAGTGTGACTCCCTaGACAATAAATGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFIPSVTP*TINVLP
Trigger: GGGAAGTACATTTATTGTCCAGGGAGTCACACTTGG...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000513807.5
CDS-3UTR CCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATACACTGGGTTTGGATATaGACAAGGATGTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFIHWVWI*TRMLSL
Trigger: CAGAGACAACATCCTTGTCCATATCCAAACCCAGTG...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CCA 90 bp AAACATTTATACTCCTGCTTACAGATTGCCAAGTCTAATCATCCCTTAAGTCTTCTAGCACTGAAACACTaGGTTTGGATATGGACAAGG +
Preference number: 4 (lower is better)
Translates to: KHLYSCLQIAKSNHPLSLLALKH*VWIWTR
Trigger: CCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG...AAGACTTAAGGGATGATTAGACTTGGCAATCTGTAAGCAGGAGTATAAATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CCA 90 bp TGGACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATAGTTGCAAAAGATCAGTaGACAAAAATCCTCCACAAC +
Preference number: 4 (lower is better)
Translates to: WTRMLSLTCIFWVPWFLIVAKDQ*TKILHN
Trigger: GTTGTGGAGGATTTTTGTCCACTGATCTTTTGCAAC...TATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR TCA 90 bp GACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATATTTTCAATCAGACTTGCTaGATAAAAAGGCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: DKDVVSDLYLLGTLVFDIFNQTC*IKRHCH
Trigger: GTGGCAATGCCTTTTTATTCAGCAAGTCTGATTGAA...AATATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR TCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATTCAATCAGACTTGCTaGATAAAAAGGCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSFNQTC*IKRHCH
Trigger: GTGGCAATGCCTTTTTATTCAGCAAGTCTGATTGAA...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR TCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAAGTAGGACAAACTTCTaGATAACTGAGCTGATGATG +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSSRTNF*ITELMM
Trigger: CATCATCAGCTCAGTTATTCAGAAGTTTGTCCTACT...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR TCA 90 bp AAACATTTATACTCCTGCTTACAGATTGCCAAGTCTAATCATCCCTTAAGTCTTCAAGGATGTTGTCTCTaGCTTGTATCTTTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: KHLYSCLQIAKSNHPLSLQGCCL*LVSFGY
Trigger: GTACCCAAAAGATACAAGTCAGAGACAACATCCTTG...AAGACTTAAGGGATGATTAGACTTGGCAATCTGTAAGCAGGAGTATAAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp TTCTCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAATTCTGTAAAGAGACTTaGAAGTCCAATACCAAATCC +
Preference number: 4 (lower is better)
Translates to: FSLNSGSKNSPMIHTTSKFCKET*KSNTKS
Trigger: GGATTTGGTATTGGACTTGCAAGTCTCTTTACAGAA...TTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp CTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAAACTGTAAAACAGCTGCATaGAGTGTGTACTGTATTATA +
Preference number: 4 (lower is better)
Translates to: LNSGSKNSPMIHTTSKANCKTAA*SVYCII
Trigger: TATAATACAGTACACACTGCATGCAGCTGTTTTACA...GTTTGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CCA 90 bp TCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCACTGACTTGTATCTTTTaGGTACCTTGGTTTTTGATA +
Preference number: 4 (lower is better)
Translates to: SLNSGSKNSPMIHTTSKALTCIF*VPWFLI
Trigger: TATCAAAAACCAAGGTACCCAAAAGATACAAGTCAG...TGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR TCA 90 bp AAACATTTATACTCCTGCTTACAGATTGCCAAGTCTAATCATCCCTTAAGTCTTTTCAATCAGACTTGCTaGATAAAAAGGCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: KHLYSCLQIAKSNHPLSLFNQTC*IKRHCH
Trigger: GTGGCAATGCCTTTTTATTCAGCAAGTCTGATTGAA...AAGACTTAAGGGATGATTAGACTTGGCAATCTGTAAGCAGGAGTATAAATGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR TCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATAAGTAGGACAAACTTCTaGATAACTGAGCTGATGATG +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFISRTNF*ITELMM
Trigger: CATCATCAGCTCAGTTATTCAGAAGTTTGTCCTACT...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR TCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATAAGTTCTGTATGCTTCTaGAAACACCAGCTAAGGTAT +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFISSVCF*KHQLRY
Trigger: ATACCTTAGCTGGTGTTTTCAGAAGCATACAGAACT...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR GCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATTCTGTAAAGAGACTTaGAAGTCCAATACCAAATCC +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSFCKET*KSNTKS
Trigger: GGATTTGGTATTGGACTTGCAAGTCTCTTTACAGAA...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000513807.5
CDS-3UTR GCA 90 bp GACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATATTTTCTGTAAAGAGACTTaGAAGTCCAATACCAAATCC +
Preference number: 4 (lower is better)
Translates to: DKDVVSDLYLLGTLVFDIFCKET*KSNTKS
Trigger: GGATTTGGTATTGGACTTGCAAGTCTCTTTACAGAA...AATATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCACGAATTATCTCACTCTaGACTGTTTCAATCAGACTT +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSRIISL*TVSIRL
Trigger: AAGTCTGATTGAAACAGTGCAGAGTGAGATAATTCG...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR CCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAATTGATGACTGTAAATaGAGTGAGATGGTAATGCTG +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSIDDCK*SEMVML
Trigger: CAGCATTACCATCTCACTCCATTTACAGTCATCAAT...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000513807.5
CDS-3UTR CCA 90 bp GACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATATTATTGATGACTGTAAATaGAGTGAGATGGTAATGCTG +
Preference number: 4 (lower is better)
Translates to: DKDVVSDLYLLGTLVFDIIDDCK*SEMVML
Trigger: CAGCATTACCATCTCACTCCATTTACAGTCATCAAT...AATATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CCA 90 bp GACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATATTATTCGTATGCATTCTTaGTTGGACAATATCAGTGCA +
Preference number: 4 (lower is better)
Translates to: DKDVVSDLYLLGTLVFDIIRMHS*LDNISA
Trigger: TGCACTGATATTGTCCAACCAAGAATGCATACGAAT...AATATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR TCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATATGCTTTCAGTGTACTTaGCTCAAATTAAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFICFQCT*LKLRNP
Trigger: AGGGTTTCTTAATTTGAGTCAAGTACACTGAAAGCA...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR TCA 90 bp AAACATTTATACTCCTGCTTACAGATTGCCAAGTCTAATCATCCCTTAAGTCTTAATAATTTAAATGAATaGAGGACTCTGCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: KHLYSCLQIAKSNHPLSLNNLNE*RTLLGS
Trigger: AGACCCCAGCAGAGTCCTTCATTCATTTAAATTATT...AAGACTTAAGGGATGATTAGACTTGGCAATCTGTAAGCAGGAGTATAAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504098.1
CDS-3UTR GCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATACGAATTATCTCACTCTaGACTGTTTCAATCAGACTT +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFIRIISL*TVSIRL
Trigger: AAGTCTGATTGAAACAGTGCAGAGTGAGATAATTCG...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR GCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATGTAAAACAGCTGCATaGAGTGTGTACTGTATTATA +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSCKTAA*SVYCII
Trigger: TATAATACAGTACACACTGCATGCAGCTGTTTTACA...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR GCA 90 bp GACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATATTAAACATTTATACTCCTaGTTACAGATTGCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: DKDVVSDLYLLGTLVFDIKHLYS*LQIAKS
Trigger: AGACTTGGCAATCTGTAAGCAGGAGTATAAATGTTT...AATATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAAAACATTTATACTCCTaGTTACAGATTGCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSKHLYS*LQIAKS
Trigger: AGACTTGGCAATCTGTAAGCAGGAGTATAAATGTTT...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp GACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATATTAGTATGCTTTTCTGTTaGAAAAGATCAGTGGACAAA +
Preference number: 4 (lower is better)
Translates to: DKDVVSDLYLLGTLVFDISMLFC*KRSVDK
Trigger: TTTGTCCACTGATCTTTTGCAACAGAAAAGCATACT...AATATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR GCA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAGAAGCTGACAAAGTATaGTTTTCTGTTGCAAAAGAT +
Preference number: 4 (lower is better)
Translates to: TFQSIFFPSISLVSLITSEADKV*FSVAKD
Trigger: ATCTTTTGCAACAGAAAAGCATACTTTGTCAGCTTC...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR CCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATAATTGATGACTGTAAATaGAGTGAGATGGTAATGCTG +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFIIDDCK*SEMVML
Trigger: CAGCATTACCATCTCACTCCATTTACAGTCATCAAT...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000513807.5
CDS-3UTR CCA 90 bp GACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATATTAACCTTATTTGTGTATaGTTCAGCCTATCAGTCTTA +
Preference number: 4 (lower is better)
Translates to: DKDVVSDLYLLGTLVFDINLICV*FSLSVL
Trigger: TAAGACTGATAGGCTGAACCATACACAAATAAGGTT...AATATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355943.8
3UTR CAA 72 bp GATATGGACAAGGATGTTGTCTCTGACTTGTATCTTTaGGGTACCTTGGTTTTTGATATTTTGATGTTCAAG +
Preference number: 4 (lower is better)
Translates to: DMDKDVVSDLYL*GTLVFDILMFK
Trigger: CTTGAACATCAAAATATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTCCATATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR GCA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATATGTAAAACAGCTGCATaGAGTGTGTACTGTATTATA +
Preference number: 4 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFICKTAA*SVYCII
Trigger: TATAATACAGTACACACTGCATGCAGCTGTTTTACA...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR CCA 90 bp AAACATTTATACTCCTGCTTACAGATTGCCAAGTCTAATCATCCCTTAAGTCTTCTCTGCTATACAACTTaGTACCATATCAATGATACT +
Preference number: 4 (lower is better)
Translates to: KHLYSCLQIAKSNHPLSLLCYTT*YHINDT
Trigger: AGTATCATTGATATGGTACCAAGTTGTATAGCAGAG...AAGACTTAAGGGATGATTAGACTTGGCAATCTGTAAGCAGGAGTATAAATGTTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS GCA 90 bp AGTCGTCACCCAGTGGCCCAGGTCCGACCCGGTGCTGAAGGACCTTaGAGGGAAGGCGCCGCCAAAGCCCTGCTCGTCCCGGGCACCACC +
Preference number: 5 (lower is better)
Translates to: SRHPVAQVRPGAEGP*REGAAKALLVPGTT
Trigger: GGTGGTGCCCGGGACGAGCAGGGCTTTGGCGGCGCCTTCCCTGCAAGGTCCTTCAGCACCGGGTCGGACCTGGGCCACTGGGTGACGACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS TCA 90 bp TATCTGGGGGAGTCGTCACCCAGTGGCCCAGGTCCGACCCGGTGCTaGAGGACCTTGCAGGGAAGGCGCCGCCAAAGCCCTGCTCGTCCC +
Preference number: 5 (lower is better)
Translates to: YLGESSPSGPGPTRC*RTLQGRRRQSPARP
Trigger: GGGACGAGCAGGGCTTTGGCGGCGCCTTCCCTGCAAGGTCCTTCAGCACCGGGTCGGACCTGGGCCACTGGGTGACGACTCCCCCAGATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS CCA 90 bp TGCAGGTTGCGGCTGCCGGGGATATCTGGGGGAGTCGTCACCCAGTaGCCCAGGTCCGACCCGGTGCTGAAGGACCTTGCAGGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: CRLRLPGISGGVVTQ*PRSDPVLKDLAGKA
Trigger: CGCCTTCCCTGCAAGGTCCTTCAGCACCGGGTCGGACCTGGGCCACTGGGTGACGACTCCCCCAGATATCCCCGGCAGCCGCAACCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS-3UTR CAA 90 bp AAACATTTATACTCCTGCTTACAGATTGCCAAGTCTAATCATCCCTTAAGTCTTTCGCCCCAGTGCAGGTaGCGGCTGCCGGGGATATCT +
Preference number: 5 (lower is better)
Translates to: KHLYSCLQIAKSNHPLSLSPQCR*RLPGIS
Trigger: AGATATCCCCGGCAGCCGCAACCTGCACTGGGGCGA...AAGACTTAAGGGATGATTAGACTTGGCAATCTGTAAGCAGGAGTATAAATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR CAA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATATCGCCCCAGTGCAGGTaGCGGCTGCCGGGGATATCT +
Preference number: 5 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFISPQCR*RLPGIS
Trigger: AGATATCCCCGGCAGCCGCAACCTGCACTGGGGCGA...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS TCA 90 bp ACCGTAGGGAAGATCAAGGAAAGAAGCGGAAGAAGTCGTTTGCTATaGGGCACTCCCATGCCTATCACTCTTCCAATTCCTTCTTTAACA +
Preference number: 5 (lower is better)
Translates to: TVGKIKERSGRSRLL*GTPMPITLPIPSLT
Trigger: TGTTAAAGAAGGAATTGGAAGAGTGATAGGCATGGGAGTGCCTCATAGCAAACGACTTCTTCCGCTTCTTTCCTTGATCTTCCCTACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355943.8
ENST00000502462.6
ENST00000504098.1
ENST00000509432.1
ENST00000513706.2
ENST00000513807.5
CDS CCA 90 bp GGTGTAAATTCACTAATTATGCCTTCTGCTCCAAGTGTGACTCCCTaGACAATAAATGTACTTCCCATTCCTTTCCACAGGGCTCTAGGT +
Preference number: 5 (lower is better)
Translates to: GVNSLIMPSAPSVTP*TINVLPIPFHRALG
Trigger: ACCTAGAGCCCTGTGGAAAGGAATGGGAAGTACATTTATTGTCCAGGGAGTCACACTTGGAGCAGAAGGCATAATTAGTGAATTTACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000502462.6
ENST00000504098.1
ENST00000508781.5
ENST00000513807.5
CDS CCA 90 bp TGTGCGTGTTCCTTGAATGTGAAGGCGGTGCAAAACTGTTTCCAATaGGTAAAGTATAACGTCAGAACAAAGACTGGCAGCAAAGTTAGC +
Preference number: 5 (lower is better)
Translates to: CACSLNVKAVQNCFQ*VKYNVRTKTGSKVS
Trigger: GCTAACTTTGCTGCCAGTCTTTGTTCTGACGTTATACTTTACCCATTGGAAACAGTTTTGCACCGCCTTCACATTCAAGGAACACGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000502462.6
ENST00000504098.1
ENST00000509432.1
ENST00000513706.2
ENST00000513807.5
CDS-3UTR CAA 90 bp CTAGCACTGAAACACTGGGTTTGGATATGGACAAGGATGTTGTCTCTGACTTGTTCCTGCCTTATGGTATaGATACAGTCTCTCATTCCC +
Preference number: 5 (lower is better)
Translates to: LALKHWVWIWTRMLSLTCSCLMV*IQSLIP
Trigger: GGGAATGAGAGACTGTATCAATACCATAAGGCAGGA...ACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CAA 90 bp CTAGCACTGAAACACTGGGTTTGGATATGGACAAGGATGTTGTCTCTGACTTGTACTCCTGCTTACAGATaGCCAAGTCTAATCATCCCT +
Preference number: 5 (lower is better)
Translates to: LALKHWVWIWTRMLSLTCTPAYR*PSLIIP
Trigger: AGGGATGATTAGACTTGGCAATCTGTAAGCAGGAGT...ACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CAA 90 bp TCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCACTGAATAAAAAGGCATaGCCACCACGTAAGTTAGGG +
Preference number: 5 (lower is better)
Translates to: SLNSGSKNSPMIHTTSKALNKKA*PPRKLG
Trigger: CCCTAACTTACGTGGTGGCAATGCCTTTTTATTCAG...TGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CAA 90 bp TTCTCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAATATTGTGCGTGTTCCTaGAATGTGAAGGCGGTGCAA +
Preference number: 5 (lower is better)
Translates to: FSLNSGSKNSPMIHTTSKYCACS*NVKAVQ
Trigger: TTGCACCGCCTTCACATTCAAGGAACACGCACAATA...TTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CAA 90 bp CTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAAACTCCTGCCTTATGGTATaGATACAGTCTCTCATTCCC +
Preference number: 5 (lower is better)
Translates to: LNSGSKNSPMIHTTSKANSCLMV*IQSLIP
Trigger: GGGAATGAGAGACTGTATCAATACCATAAGGCAGGA...GTTTGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CAA 90 bp CTAGCACTGAAACACTGGGTTTGGATATGGACAAGGATGTTGTCTCTGACTTGTTATTCGTATGCATTCTaGGTTGGACAATATCAGTGC +
Preference number: 5 (lower is better)
Translates to: LALKHWVWIWTRMLSLTCYSYAF*VGQYQC
Trigger: GCACTGATATTGTCCAACCAAGAATGCATACGAATA...ACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR CAA 90 bp CTAGCACTGAAACACTGGGTTTGGATATGGACAAGGATGTTGTCTCTGACTTGTCAAGATCAACCTTATTaGTGTATGGTTCAGCCTATC +
Preference number: 5 (lower is better)
Translates to: LALKHWVWIWTRMLSLTCQDQPY*CMVQPI
Trigger: GATAGGCTGAACCATACACAAATAAGGTTGATCTTG...ACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR CAA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATATTGTGCGTGTTCCTaGAATGTGAAGGCGGTGCAA +
Preference number: 5 (lower is better)
Translates to: TFQSIFFPSISLVSLITSYCACS*NVKAVQ
Trigger: TTGCACCGCCTTCACATTCAAGGAACACGCACAATA...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR CAA 90 bp CTAGCACTGAAACACTGGGTTTGGATATGGACAAGGATGTTGTCTCTGACTTGTTCTCATTCCCTCATATaGTGTATTAATTGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: LALKHWVWIWTRMLSLTCSHSLI*CINWKH
Trigger: GTGCTTCCAATTAATACACAATATGAGGGAATGAGA...ACAAGTCAGAGACAACATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CAA 90 bp TCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCACTCCATGGCCAAAATTaGGCTTATATAAGAGGACCA +
Preference number: 5 (lower is better)
Translates to: SLNSGSKNSPMIHTTSKALHGQN*AYIRGP
Trigger: TGGTCCTCTTATATAAGCCAAATTTTGGCCATGGAG...TGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS TCA 90 bp TGCCTGTACTGCCTCTCATCTTATTTGATACAAAGAAGAACCTTGTaGGATAAGCAGAGCAGATATTGTCACACTTGTCTTACTGATGAG +
Preference number: 5 (lower is better)
Translates to: CLYCLSSYLIQRRTL*DKQSRYCHTCLTDE
Trigger: CTCATCAGTAAGACAAGTGTGACAATATCTGCTCTGCTTATCTCACAAGGTTCTTCTTTGTATCAAATAAGATGAGAGGCAGTACAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513706.2
CDS-3UTR CAA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCACTGAATAAAAAGGCATaGCCACCACGTAAGTTAGGG +
Preference number: 5 (lower is better)
Translates to: TFQSIFFPSISLVSLITSLNKKA*PPRKLG
Trigger: CCCTAACTTACGTGGTGGCAATGCCTTTTTATTCAG...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000513807.5
CDS-3UTR CAA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATATATTGTGCGTGTTCCTaGAATGTGAAGGCGGTGCAA +
Preference number: 5 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFIYCACS*NVKAVQ
Trigger: TTGCACCGCCTTCACATTCAAGGAACACGCACAATA...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR CAA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAACTCCTGCTTACAGATaGCCAAGTCTAATCATCCCT +
Preference number: 5 (lower is better)
Translates to: TFQSIFFPSISLVSLITSTPAYR*PSLIIP
Trigger: AGGGATGATTAGACTTGGCAATCTGTAAGCAGGAGT...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CAA 90 bp AAACATTTATACTCCTGCTTACAGATTGCCAAGTCTAATCATCCCTTAAGTCTTGGGGTCTGTGGCAAATaGCAAGGTGTAGAGTGTTTA +
Preference number: 5 (lower is better)
Translates to: KHLYSCLQIAKSNHPLSLGVCGK*QGVECL
Trigger: TAAACACTCTACACCTTGCAATTTGCCACAGACCCC...AAGACTTAAGGGATGATTAGACTTGGCAATCTGTAAGCAGGAGTATAAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504098.1
CDS-3UTR CAA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCACTGAATAAAAAGGCATaGCCACCACGTAAGTTAGGC +
Preference number: 5 (lower is better)
Translates to: TFQSIFFPSISLVSLITSLNKKA*PPRKLG
Trigger: GCCTAACTTACGTGGTGGCAATGCCTTTTTATTCAG...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509432.1
CDS-3UTR CAA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATACTGAATAAAAAGGCATaGCCACCACGTAAGTTAGGG +
Preference number: 5 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFILNKKA*PPRKLG
Trigger: CCCTAACTTACGTGGTGGCAATGCCTTTTTATTCAG...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000513807.5
CDS-3UTR CAA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATATCCTGCCTTATGGTATaGATACAGTCTCTCATTCCC +
Preference number: 5 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFISCLMV*IQSLIP
Trigger: GGGAATGAGAGACTGTATCAATACCATAAGGCAGGA...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR CAA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCAGATGTTGTCTCTGACTaGTATCTTTTGGGTACCTTG +
Preference number: 5 (lower is better)
Translates to: TFQSIFFPSISLVSLITSDVVSD*YLLGTL
Trigger: CAAGGTACCCAAAAGATACAAGTCAGAGACAACATC...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CAA 90 bp TCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAAGCAATATGGACAAGGATGTaGTCTCTGACTTGTATCTTT +
Preference number: 5 (lower is better)
Translates to: SLNSGSKNSPMIHTTSKAIWTRM*SLTCIF
Trigger: AAAGATACAAGTCAGAGACAACATCCTTGTCCATAT...TGCTTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CAA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCACGTATGCATTCTTGGTaGGACAATATCAGTGCAAAG +
Preference number: 5 (lower is better)
Translates to: TFQSIFFPSISLVSLITSRMHSW*DNISAK
Trigger: CTTTGCACTGATATTGTCCAACCAAGAATGCATACG...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR CAA 90 bp TTCTCTCTTAACAGTGGCTCTAAAAACAGCCCAATGATTCACACAACTAGCAAATCTCATTCCCTCATATaGTGTATTAATTGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: FSLNSGSKNSPMIHTTSKSHSLI*CINWKH
Trigger: GTGCTTCCAATTAATACACAATATGAGGGAATGAGA...TTTGCTAGTTGTGTGAATCATTGGGCTGTTTTTAGAGCCACTGTTAAGAGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CAA 90 bp TGGACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATAATATGGACAAGGATGTaGTCTCTGACTTGTATCTTT +
Preference number: 5 (lower is better)
Translates to: WTRMLSLTCIFWVPWFLIIWTRM*SLTCIF
Trigger: AAAGATACAAGTCAGAGACAACATCCTTGTCCATAT...TATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS CCA 90 bp TCCCTGAGTTTTGTTGAAACTGTACATAATATTGATGACTGTAAATaGAGTGAGATGGTAATGCTGAGCATGGTAATTAACCTGACATTG +
Preference number: 5 (lower is better)
Translates to: SLSFVETVHNIDDCK*SEMVMLSMVINLTL
Trigger: CAATGTCAGGTTAATTACCATGCTCAGCATTACCATCTCACTCCATTTACAGTCATCAATATTATGTACAGTTTCAACAAAACTCAGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000508781.5
ENST00000513807.5
CDS-3UTR CAA 90 bp GACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATATTCTGTATTGTCAATTATaGTGCGTGTTCCTTGAATGT +
Preference number: 5 (lower is better)
Translates to: DKDVVSDLYLLGTLVFDILYCQL*CVFLEC
Trigger: ACATTCAAGGAACACGCACAATAATTGACAATACAG...AATATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CAA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATCTCATTCCCTCATATaGTGTATTAATTGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: TFQSIFFPSISLVSLITSSHSLI*CINWKH
Trigger: GTGCTTCCAATTAATACACAATATGAGGGAATGAGA...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR CAA 90 bp ACTTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATCTGACTTGTATCTTTaGGGTACCTTGGTTTTTGAT +
Preference number: 5 (lower is better)
Translates to: TFQSIFFPSISLVSLITSSDLYL*GTLVFD
Trigger: ATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGA...TGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CAA 90 bp GACAAGGATGTTGTCTCTGACTTGTATCTTTTGGGTACCTTGGTTTTTGATATTTTGCTTTCAGTGTACTaGACTCAAATTAAGAAACCC +
Preference number: 5 (lower is better)
Translates to: DKDVVSDLYLLGTLVFDILLSVY*TQIKKP
Trigger: GGGTTTCTTAATTTGAGTCAAGTACACTGAAAGCAA...AATATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGAGACAACATCCTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR CAA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATACTGTATTGTCAATTATaGTGCGTGTTCCTTGAATGT +
Preference number: 5 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFILYCQL*CVFLEC
Trigger: ACATTCAAGGAACACGCACAATAATTGACAATACAG...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR CAA 90 bp TTTCCAATCCATTTTCTTCCCCAGTATTTCACTTGTATCCCTCATAACTTCATATCTCATTCCCTCATATaGTGTATTAATTGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: FPIHFLPQYFTCIPHNFISHSLI*CINWKH
Trigger: GTGCTTCCAATTAATACACAATATGAGGGAATGAGA...TATGAAGTTATGAGGGATACAAGTGAAATACTGGGGAAGAAAATGGATTGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000504098.1
ENST00000509432.1
ENST00000513807.5
CDS-3UTR CAA 90 bp AAACATTTATACTCCTGCTTACAGATTGCCAAGTCTAATCATCCCTTAAGTCTTTCTGACTTGTATCTTTaGGGTACCTTGGTTTTTGAT +
Preference number: 5 (lower is better)
Translates to: KHLYSCLQIAKSNHPLSLSDLYL*GTLVFD
Trigger: ATCAAAAACCAAGGTACCCAAAAGATACAAGTCAGA...AAGACTTAAGGGATGATTAGACTTGGCAATCTGTAAGCAGGAGTATAAATGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000504098.1
CDS-3UTR CAA 90 bp AAACATTTATACTCCTGCTTACAGATTGCCAAGTCTAATCATCCCTTAAGTCTTCCATGGATATTTGATTaGGCACCCATGTTAAAGAAA +
Preference number: 5 (lower is better)
Translates to: KHLYSCLQIAKSNHPLSLPWIFD*APMLKK
Trigger: TTTCTTTAACATGGGTGCCAAATCAAATATCCATGG...AAGACTTAAGGGATGATTAGACTTGGCAATCTGTAAGCAGGAGTATAAATGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS-3UTR CAA 90 bp AAACATTTATACTCCTGCTTACAGATTGCCAAGTCTAATCATCCCTTAAGTCTTAAGTATGCTTTTCTGTaGCAAAAGATCAGTGGACAA +
Preference number: 5 (lower is better)
Translates to: KHLYSCLQIAKSNHPLSLKYAFL*QKISGQ
Trigger: TTGTCCACTGATCTTTTGCAACAGAAAAGCATACTT...AAGACTTAAGGGATGATTAGACTTGGCAATCTGTAAGCAGGAGTATAAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355943.8
CDS CCA 72 bp AGGGTTCCTCCGTGGGGCCTTCGTACGGGGTGGAGGTaGTGGGCACGCCGTAGGGCGGGCTCTTCTCGCCCC +
Preference number: 6 (lower is better)
Translates to: RVPPWGLRTGWR*WARRRAGSSRP
Trigger: GGGGCGAGAAGAGCCCGCCCTACGGCGTGCCCACCACCTCCACCCCGTACGAAGGCCCCACGGAGGAACCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS GCA 72 bp CCAGTGGCCCAGGTCCGACCCGGTGCTGAAGGACCTTaGAGGGAAGGCGCCGCCAAAGCCCTGCTCGTCCCG +
Preference number: 6 (lower is better)
Translates to: PVAQVRPGAEGP*REGAAKALLVP
Trigger: CGGGACGAGCAGGGCTTTGGCGGCGCCTTCCCTGCAAGGTCCTTCAGCACCGGGTCGGACCTGGGCCACTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS TCA 72 bp GAGTCGTCACCCAGTGGCCCAGGTCCGACCCGGTGCTaGAGGACCTTGCAGGGAAGGCGCCGCCAAAGCCCT +
Preference number: 6 (lower is better)
Translates to: ESSPSGPGPTRC*RTLQGRRRQSP
Trigger: AGGGCTTTGGCGGCGCCTTCCCTGCAAGGTCCTTCAGCACCGGGTCGGACCTGGGCCACTGGGTGACGACTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS CCA 72 bp CGGCTGCCGGGGATATCTGGGGGAGTCGTCACCCAGTaGCCCAGGTCCGACCCGGTGCTGAAGGACCTTGCA +
Preference number: 6 (lower is better)
Translates to: RLPGISGGVVTQ*PRSDPVLKDLA
Trigger: TGCAAGGTCCTTCAGCACCGGGTCGGACCTGGGCCACTGGGTGACGACTCCCCCAGATATCCCCGGCAGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355943.8
ENST00000447245.6
CDS TCA 72 bp AAGATCAAGGAAAGAAGCGGAAGAAGTCGTTTGCTATaGGGCACTCCCATGCCTATCACTCTTCCAATTCCT +
Preference number: 6 (lower is better)
Translates to: KIKERSGRSRLL*GTPMPITLPIP
Trigger: AGGAATTGGAAGAGTGATAGGCATGGGAGTGCCTCATAGCAAACGACTTCTTCCGCTTCTTTCCTTGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355943.8
ENST00000502462.6
ENST00000504098.1
ENST00000509432.1
ENST00000513706.2
ENST00000513807.5
CDS CCA 72 bp TCACTAATTATGCCTTCTGCTCCAAGTGTGACTCCCTaGACAATAAATGTACTTCCCATTCCTTTCCACAGG +
Preference number: 6 (lower is better)
Translates to: SLIMPSAPSVTP*TINVLPIPFHR
Trigger: CCTGTGGAAAGGAATGGGAAGTACATTTATTGTCCAGGGAGTCACACTTGGAGCAGAAGGCATAATTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000502462.6
ENST00000504098.1
ENST00000508781.5
ENST00000513807.5
CDS CCA 72 bp TTAATAACTCATCCAAAGCCAAGTAACCAGTTAGTGTaGAACTCTGTTCTAAACCCCGGTACTCTCTGCCTG +
Preference number: 6 (lower is better)
Translates to: LITHPKPSNQLV*NSVLNPGTLCL
Trigger: CAGGCAGAGAGTACCGGGGTTTAGAACAGAGTTCCACACTAACTGGTTACTTGGCTTTGGATGAGTTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513706.2
CDS CAA 72 bp GCCAAGGTCTGTATTGTCAATTATTGTGCGTGTTCCTaGAATGTGAAGGCGGTGCAAAACTGTTTCCAATGG +
Preference number: 6 (lower is better)
Translates to: AKVCIVNYCACS*NVKAVQNCFQW
Trigger: CCATTGGAAACAGTTTTGCACCGCCTTCACATTCAAGGAACACGCACAATAATTGACAATACAGACCTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355943.8
ENST00000447245.6
ENST00000502462.6
ENST00000504098.1
ENST00000509432.1
ENST00000513706.2
ENST00000513807.5
CDS CAA 72 bp GCAAAAATGCCAGGTCTGGAACCAAGGTGTAGGATTTaGTGCATTCTGTCTGCTAGTTTGGTTACCTTTGGA +
Preference number: 6 (lower is better)
Translates to: AKMPGLEPRCRI*CILSASLVTFG
Trigger: TCCAAAGGTAACCAAACTAGCAGACAGAATGCACAAAATCCTACACCTTGGTTCCAGACCTGGCATTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513706.2
CDS GCA 72 bp TTAGTGTGGAACTCTGTTCTAAACCCCGGTACTCTCTaGCTGTACTGCCTCTCATCTTATTTGATACAAAGA +
Preference number: 6 (lower is better)
Translates to: LVWNSVLNPGTL*LYCLSSYLIQR
Trigger: TCTTTGTATCAAATAAGATGAGAGGCAGTACAGGCAGAGAGTACCGGGGTTTAGAACAGAGTTCCACACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513706.2
CDS CAA 90 bp AGGAAACAGGCAAAAATGCCAGGTCTGGAACCAAGGTGTAGGATTTaGTGCATTCTGTCTGCTAGTTTGGTTACCTTTGGAAAACAAGAA +
Preference number: 6 (lower is better)
Translates to: RKQAKMPGLEPRCRI*CILSASLVTFGKQE
Trigger: TTCTTGTTTTCCAAAGGTAACCAAACTAGCAGACAGAATGCACAAAATCCTACACCTTGGTTCCAGACCTGGCATTTTTGCCTGTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513706.2
CDS TCA 72 bp AATTCTGATAGGGGCCAGGTAAATAATTTAAATGAATaGAGGACTCTGCTGGGGTCTGTGGCAAATTGCAAG +
Preference number: 6 (lower is better)
Translates to: NSDRGQVNNLNE*RTLLGSVANCK
Trigger: CTTGCAATTTGCCACAGACCCCAGCAGAGTCCTTCATTCATTTAAATTATTTACCTGGCCCCTATCAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504098.1