Pregenerated sensors for SLC25A40 (Homo sapiens)
Ensembl gene IDs: ENSG00000075303Ensembl transcript IDs: ENST00000341119.10, ENST00000429674.5, ENST00000444363.5, ENST00000446236.5, ENST00000470328.1, ENST00000491499.1
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCCCCTCCAAAGGGAAATCCAACCATCTTCAGATACTTTCTTGCTaGCAAATCGATGCAGTTCCACGTAAGAAAACTTCTTGGACTGCA | + |
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Preference number: 1 (lower is better) Translates to: SPSKGKSNHLQILSC*QIDAVPRKKTSWTA Trigger: TGCAGTCCAAGAAGTTTTCTTACGTGGAACTGCATCGATTTGTCAGCAAGAAAGTATCTGAAGATGGTTGGATTTCCCTTTGGAGGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| 3UTR GCA 90 bp | AGAAACATCACCAAGAACACTGTTGTGGCACATGTTTGCAAATATTaGAATTCCTGCAACATCATATGTATTGAAAAGTCTGGAAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: RNITKNTVVAHVCKY*NSCNIICIEKSGKP Trigger: GGGCTTTCCAGACTTTTCAATACATATGATGTTGCAGGAATTGCAATATTTGCAAACATGTGCCACAACAGTGTTCTTGGTGATGTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| 3UTR-3UTR CCA 90 bp | ATCTCTAAGAACAGTAGGAGCCCAGCCCCTCCAAAGGGAAATCCAACCATCTTCGGGAGTGGGTTGTTTTaGGCTTGGAGTCTAATTTTA | + |
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Preference number: 2 (lower is better) Translates to: ISKNSRSPAPPKGNPTIFGSGLF*AWSLIL Trigger: TAAAATTAGACTCCAAGCCCAAAACAACCCACTCCC...GAAGATGGTTGGATTTCCCTTTGGAGGGGCTGGGCTCCTACTGTTCTTAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| 3UTR-3UTR GCA 90 bp | CAGTTACTGCACCAAATCTGGCTACAATTCCAGCAACAATTGGTATGCAGGTTTGGTGAAAAACATTCTTaGCTAAGAGTCTCCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: QLLHQIWLQFQQQLVCRFGEKHS*LRVSIF Trigger: GAAGATGGAGACTCTTAGGCAAGAATGTTTTTCACC...AAACCTGCATACCAATTGTTGCTGGAATTGTAGCCAGATTTGGTGCAGTAACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| 3UTR-3UTR TCA 90 bp | GACTGCATCTTGGTTCTAATCAATTCTAGTGGACTTATCACAGTTACTGCACCACCAGGGGTGTCACTATaGAGATATGTTAAGTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: DCILVLINSSGLITVTAPPGVSL*RYVKFQ Trigger: TTGAAACTTAACATATCTTCATAGTGACACCCCTGG...TGGTGCAGTAACTGTGATAAGTCCACTAGAATTGATTAGAACCAAGATGCAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCCAAAGGGAAATCCAACCATCTTCAGATACTTTCTTGCTGACAAATCGAAATTCCAGCAACAATTaGTATGCAGGTTTCATTTTC | + |
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Preference number: 2 (lower is better) Translates to: PLQREIQPSSDTFLLTNRNSSNN*YAGFIF Trigger: GAAAATGAAACCTGCATACCAATTGTTGCTGGAATT...TCGATTTGTCAGCAAGAAAGTATCTGAAGATGGTTGGATTTCCCTTTGGAGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| 3UTR-3UTR GCA 90 bp | TCCATATCCCAAAAACTTGTGCCCAAGACAAAAAGAGGGAAGAATTTAAGTTTAGGTGAAAAACATTCTTaGCTAAGAGTCTCCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: SISQKLVPKTKRGKNLSLGEKHS*LRVSIF Trigger: GAAGATGGAGACTCTTAGGCAAGAATGTTTTTCACC...TAAACTTAAATTCTTCCCTCTTTTTGTCTTGGGCACAAGTTTTTGGGATATGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| 3UTR-3UTR CCA 90 bp | TCCATATCCCAAAAACTTGTGCCCAAGACAAAAAGAGGGAAGAATTTAAGTTTACAATTCAAAAAGTTCTaGTGTATTCAACACACTCCC | + |
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Preference number: 2 (lower is better) Translates to: SISQKLVPKTKRGKNLSLQFKKF*CIQHTP Trigger: GGGAGTGTGTTGAATACACCAGAACTTTTTGAATTG...TAAACTTAAATTCTTCCCTCTTTTTGTCTTGGGCACAAGTTTTTGGGATATGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| 3UTR-3UTR CAA 90 bp | GGAGCCCAGCCCCTCCAAAGGGAAATCCAACCATCTTCAGATACTTTCTTGCTGGAGTCTCCATCTTCTTaGGCTATAGTTGTTGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: GAQPLQREIQPSSDTFLLESPSS*AIVVVS Trigger: TGAAACAACAACTATAGCCAAAGAAGATGGAGACTC...CAGCAAGAAAGTATCTGAAGATGGTTGGATTTCCCTTTGGAGGGGCTGGGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| 3UTR-3UTR CAA 90 bp | CAAACTGAGAAAGGTACATCTCTAAGAACAGTAGGAGCCCAGCCCCTCCAAAGGTTCTTATACCATAGTTaGTTGCCTCCCTCTTCACAG | + |
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Preference number: 3 (lower is better) Translates to: QTEKGTSLRTVGAQPLQRFLYHS*LPPSSQ Trigger: CTGTGAAGAGGGAGGCAACAAACTATGGTATAAGAA...CCTTTGGAGGGGCTGGGCTCCTACTGTTCTTAGAGATGTACCTTTCTCAGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| 3UTR-3UTR CAA 90 bp | CATTCTTGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGTTATACCATAGTTTGTaGCCTCCCTCTTCACAGACA | + |
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Preference number: 3 (lower is better) Translates to: HSCLRVSIFFGYSCCFKLLYHSL*PPSSQT Trigger: TGTCTGTGAAGAGGGAGGCAACAAACTATGGTATAA...CAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCAAGAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| 3UTR-3UTR CAA 90 bp | TGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGAAACAGGAGTCTCCATCTTCTTaGGCTATAGTTGTTGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: CLRVSIFFGYSCCFKLKQESPSS*AIVVVS Trigger: TGAAACAACAACTATAGCCAAAGAAGATGGAGACTC...CTGTTTCAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341119.10 ENST00000429674.5 ENST00000446236.5 |
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| 3UTR-3UTR CAA 90 bp | CATTCTTGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGGAGTCTCCATCTTCTTaGGCTATAGTTGTTGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: HSCLRVSIFFGYSCCFKLESPSS*AIVVVS Trigger: TGAAACAACAACTATAGCCAAAGAAGATGGAGACTC...CAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCAAGAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341119.10 ENST00000429674.5 ENST00000446236.5 |
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| 3UTR-3UTR CAA 90 bp | TACAAGAGAGCTAAAAATCAGAGGCTATTCCTGTGTGCAAACTATTTTTACCAGACTGAACACCCAAGTTaGACTGAAGTGAACATTTGC | + |
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Preference number: 3 (lower is better) Translates to: YKRAKNQRLFLCANYFYQTEHPS*TEVNIC Trigger: GCAAATGTTCACTTCAGTCAAACTTGGGTGTTCAGT...CTGGTAAAAATAGTTTGCACACAGGAATAGCCTCTGATTTTTAGCTCTCTTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| 3UTR-3UTR CAA 90 bp | AGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGAAACAGCATCACTGGGTTGTTTTGGGCTaGGAGTCTAATTTTAACAAC | + |
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Preference number: 3 (lower is better) Translates to: RVSIFFGYSCCFKLKQHHWVVLG*ESNFNN Trigger: GTTGTTAAAATTAGACTCCAAGCCCAAAACAACCCA...GTGATGCTGTTTCAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| 3UTR TCA 72 bp | AAAGGGAAATCCAACCATCTTCAGATACTTTCTTGCTaGCAAATCGATGCAGTTCCACGTAAGAAAACTTCT | + |
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Preference number: 3 (lower is better) Translates to: KGKSNHLQILSC*QIDAVPRKKTS Trigger: AGAAGTTTTCTTACGTGGAACTGCATCGATTTGTCAGCAAGAAAGTATCTGAAGATGGTTGGATTTCCCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| 3UTR TCA 72 bp | TCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTaGAACAGCATCACTAGTATTGCTGCCTTCGAACAT | + |
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Preference number: 3 (lower is better) Translates to: SPSSLAIVVVSS*NSITSIAAFEH Trigger: ATGTTCGAAGGCAGCAATACTAGTGATGCTGTTTCAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429674.5 ENST00000446236.5 |
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| 3UTR-3UTR CAA 90 bp | GAAATACGGAAATACTTATGTACACGATTTAAATGTGCACAAGACTTGGGCTTTTTCAAGAGACTGCTTTaGATGCTAAGGAGTAATCTA | + |
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Preference number: 3 (lower is better) Translates to: EIRKYLCTRFKCAQDLGFFKRLL*MLRSNL Trigger: TAGATTACTCCTTAGCATCAAAAGCAGTCTCTTGAA...AAAGCCCAAGTCTTGTGCACATTTAAATCGTGTACATAAGTATTTCCGTATTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| 3UTR CCA 72 bp | AAAACTGTTTTAGAAACATCACCAAGAACACTGTTGTaGCACATGTTTGCAAATATTGCAATTCCTGCAACA | + |
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Preference number: 3 (lower is better) Translates to: KTVLETSPRTLL*HMFANIAIPAT Trigger: TGTTGCAGGAATTGCAATATTTGCAAACATGTGCCACAACAGTGTTCTTGGTGATGTTTCTAAAACAGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR TCA 90 bp | TTGGGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGGGCTGCGCCAAGACCTaGAGCGGCGGACCGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: LGLESNFNNIQGCHYEDMGCAKT*SGGPRA Trigger: GGCTCTCGGTCCGCCGCTTCAGGTCTTGGCGCAGCC...CATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444363.5 |
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| CDS-3UTR GCA 90 bp | TGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGAAACAGGGGGCAGAAGGCAGCTaGAGGGCCGGCAGTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: CLRVSIFFGYSCCFKLKQGAEGS*RAGSPG Trigger: GCCAGGACTGCCGGCCCTGCAGCTGCCTTCTGCCCC...CTGTTTCAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR GCA 90 bp | GGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGTTAGGGGCAGAAGGCAGCTaGAGGGCCGGCAGTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GLESNFNNIQGCHYEDMLGAEGS*RAGSPG Trigger: GCCAGGACTGCCGGCCCTGCAGCTGCCTTCTGCCCC...TAACATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000444363.5 |
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| CDS-3UTR TCA 90 bp | GAAATACGGAAATACTTATGTACACGATTTAAATGTGCACAAGACTTGGGCTTTGGCTGCGCCAAGACCTaGAGCGGCGGACCGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: EIRKYLCTRFKCAQDLGFGCAKT*SGGPRA Trigger: GGCTCTCGGTCCGCCGCTTCAGGTCTTGGCGCAGCC...AAAGCCCAAGTCTTGTGCACATTTAAATCGTGTACATAAGTATTTCCGTATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR TCA 90 bp | GCCTCTCTGACTCCACTACCAGCATTCACAATTTCTCACGCTCCTTTGTGTTCTCAGCAGCAAATTTCCTaGGGTCACACAGCTACTAGT | + |
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Preference number: 4 (lower is better) Translates to: ASLTPLPAFTISHAPLCSQQQIS*GHTATS Trigger: ACTAGTAGCTGTGTGACCTCAGGAAATTTGCTGCTG...AGAACACAAAGGAGCGTGAGAAATTGTGAATGCTGGTAGTGGAGTCAGAGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446236.5 |
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| CDS-3UTR GCA 90 bp | GGAGCCCAGCCCCTCCAAAGGGAAATCCAACCATCTTCAGATACTTTCTTGCTGTATACCATAGTTTGTTaGCTCCCTCTTCACAGACAC | + |
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Preference number: 4 (lower is better) Translates to: GAQPLQREIQPSSDTFLLYTIVC*LPLHRH Trigger: GTGTCTGTGAAGAGGGAGGCAACAAACTATGGTATA...CAGCAAGAAAGTATCTGAAGATGGTTGGATTTCCCTTTGGAGGGGCTGGGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| CDS-3UTR CCA 90 bp | CATTCTTGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGGAGAGAGCAACGGAATaGAGGCGGGGTAGAGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: HSCLRVSIFFGYSCCFKLERATE*RRGRGG Trigger: TCCGCCTCTACCCCGCCTCCATTCCGTTGCTCTCTC...CAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCAAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR CCA 90 bp | GGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGTTAGAGAGAGCAACGGAATaGAGGCGGGGTAGAGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: GLESNFNNIQGCHYEDMLERATE*RRGRGG Trigger: TCCGCCTCTACCCCGCCTCCATTCCGTTGCTCTCTC...TAACATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000444363.5 |
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| CDS-3UTR TCA 90 bp | AGAACAGTAGGAGCCCAGCCCCTCCAAAGGGAAATCCAACCATCTTCAGATACTGAGGCAAGCATTTGTTaGAGAGGTGTCACTTTGATA | + |
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Preference number: 4 (lower is better) Translates to: RTVGAQPLQREIQPSSDTEASIC*RGVTLI Trigger: TATCAAAGTGACACCTCTTCAACAAATGCTTGCCTC...AGTATCTGAAGATGGTTGGATTTCCCTTTGGAGGGGCTGGGCTCCTACTGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| CDS-3UTR TCA 90 bp | ATCTCTAAGAACAGTAGGAGCCCAGCCCCTCCAAAGGGAAATCCAACCATCTTCTATAGCTCCAGTACATaGGGCAAGCATTTGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: ISKNSRSPAPPKGNPTIFYSSST*GKHLLK Trigger: CTTCAACAAATGCTTGCCTCATGTACTGGAGCTATA...GAAGATGGTTGGATTTCCCTTTGGAGGGGCTGGGCTCCTACTGTTCTTAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| CDS-3UTR TCA 90 bp | ATCTCTAAGAACAGTAGGAGCCCAGCCCCTCCAAAGGGAAATCCAACCATCTTCCAGATACTTTCTTGCTaGCAAATCGATGCAGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: ISKNSRSPAPPKGNPTIFQILSC*QIDAVP Trigger: TGGAACTGCATCGATTTGTCAGCAAGAAAGTATCTG...GAAGATGGTTGGATTTCCCTTTGGAGGGGCTGGGCTCCTACTGTTCTTAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| CDS-3UTR TCA 90 bp | TTGGGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGCACTCCAGCCTGGTTTaGGTCTGTTCTTCAACTCTA | + |
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Preference number: 4 (lower is better) Translates to: LGLESNFNNIQGCHYEDMHSSLV*VCSSTL Trigger: TAGAGTTGAAGAACAGACTCAAACCAGGCTGGAGTG...CATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444363.5 |
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| CDS-3UTR GCA 90 bp | CCCTGGAAATTTCCTGGCTTCTTATACCATAGTTTGTTGCCTCCCTCTTCACAGGGTGAAAAACATTCTTaGCTAAGAGTCTCCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: PWKFPGFLYHSLLPPSSQGEKHS*LRVSIF Trigger: GAAGATGGAGACTCTTAGGCAAGAATGTTTTTCACC...CTGTGAAGAGGGAGGCAACAAACTATGGTATAAGAAGCCAGGAAATTTCCAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| CDS-3UTR CCA 90 bp | CAAACTGAGAAAGGTACATCTCTAAGAACAGTAGGAGCCCAGCCCCTCCAAAGGAATTCCAGCAACAATTaGTATGCAGGTTTCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: QTEKGTSLRTVGAQPLQRNSSNN*YAGFIF Trigger: GAAAATGAAACCTGCATACCAATTGTTGCTGGAATT...CCTTTGGAGGGGCTGGGCTCCTACTGTTCTTAGAGATGTACCTTTCTCAGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| CDS-3UTR TCA 90 bp | TTGGGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGGCAACAGCAGCAAACTaGGAAAGGTACATCTCTAAG | + |
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Preference number: 4 (lower is better) Translates to: LGLESNFNNIQGCHYEDMATAAN*ERYISK Trigger: CTTAGAGATGTACCTTTCTCAGTTTGCTGCTGTTGC...CATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| CDS-3UTR CCA 90 bp | TTGGGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGTACTGCACTCCAGCCTaGTTTGAGTCTGTTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: LGLESNFNNIQGCHYEDMYCTPA*FESVLQ Trigger: TTGAAGAACAGACTCAAACCAGGCTGGAGTGCAGTA...CATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444363.5 |
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| CDS-3UTR TCA 90 bp | TTGGGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGTATAGCTCCAGTACATaGGGCAAGCATTTGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LGLESNFNNIQGCHYEDMYSSST*GKHLLK Trigger: CTTCAACAAATGCTTGCCTCATGTACTGGAGCTATA...CATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429674.5 ENST00000444363.5 |
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| CDS-3UTR TCA 90 bp | CATTCTTGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGGGGTGTCACTATTACTaGTGTCAGTATAGCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: HSCLRVSIFFGYSCCFKLGCHYY*CQYSSS Trigger: ACTGGAGCTATACTGACATCAGTAATAGTGACACCC...CAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCAAGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR TCA 90 bp | CAGTTACTGCACCAAATCTGGCTACAATTCCAGCAACAATTGGTATGCAGGTTTTCACAGACACATAGATaGTCCATGAGTCCATTACTA | + |
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Preference number: 4 (lower is better) Translates to: QLLHQIWLQFQQQLVCRFSQTHR*SMSPLL Trigger: TAGTAATGGACTCATGGATCATCTATGTGTCTGTGA...AAACCTGCATACCAATTGTTGCTGGAATTGTAGCCAGATTTGGTGCAGTAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| CDS-3UTR TCA 90 bp | CAGTTACTGCACCAAATCTGGCTACAATTCCAGCAACAATTGGTATGCAGGTTTAGTGGTATCTATTACTaGTGTCAGTATAGCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: QLLHQIWLQFQQQLVCRFSGIYY*CQYSSS Trigger: ACTGGAGCTATACTGACATCAGTAATAGATACCACT...AAACCTGCATACCAATTGTTGCTGGAATTGTAGCCAGATTTGGTGCAGTAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| CDS-3UTR TCA 90 bp | TTTCCTGGCTTCTTATACCATAGTTTGTTGCCTCCCTCTTCACAGACACATAGACCAGGGGTGTCACTATaGAGATATGTTAAGTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: FPGFLYHSLLPPSSQTHRPGVSL*RYVKFQ Trigger: TTGAAACTTAACATATCTTCATAGTGACACCCCTGG...TCTATGTGTCTGTGAAGAGGGAGGCAACAAACTATGGTATAAGAAGCCAGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| CDS-3UTR CCA 90 bp | TTGGGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGGGGAGTGGGTTGTTTTaGGCTTGGAGTCTAATTTTA | + |
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Preference number: 4 (lower is better) Translates to: LGLESNFNNIQGCHYEDMGSGLF*AWSLIL Trigger: TAAAATTAGACTCCAAGCCCAAAACAACCCACTCCC...CATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENST00000429674.5 ENST00000444363.5 |
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| CDS-3UTR TCA 90 bp | GGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGTTAGAGGCAAGCATTTGTTaGAGAGGTGTCACTTTGATA | + |
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Preference number: 4 (lower is better) Translates to: GLESNFNNIQGCHYEDMLEASIC*RGVTLI Trigger: TATCAAAGTGACACCTCTTCAACAAATGCTTGCCTC...TAACATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429674.5 ENST00000444363.5 |
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| CDS-3UTR TCA 90 bp | CATTCTTGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGTATAGCTCCAGTACATaGGGCAAGCATTTGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: HSCLRVSIFFGYSCCFKLYSSST*GKHLLK Trigger: CTTCAACAAATGCTTGCCTCATGTACTGGAGCTATA...CAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCAAGAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341119.10 ENST00000429674.5 |
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| CDS-3UTR TCA 90 bp | TTGGGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGTCACAGACACATAGATaGTCCATGAGTCCATTACTA | + |
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Preference number: 4 (lower is better) Translates to: LGLESNFNNIQGCHYEDMSQTHR*SMSPLL Trigger: TAGTAATGGACTCATGGATCATCTATGTGTCTGTGA...CATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429674.5 ENST00000444363.5 |
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| CDS-3UTR TCA 90 bp | GAAATCCAACCATCTTCAGATACTTTCTTGCTGACAAATCGATGCAGTTCCACGCATTATAATCCAGGTTaGCATATGCAAAGGCATAGA | + |
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Preference number: 4 (lower is better) Translates to: EIQPSSDTFLLTNRCSSTHYNPG*HMQRHR Trigger: TCTATGCCTTTGCATATGTCAACCTGGATTATAATG...CGTGGAACTGCATCGATTTGTCAGCAAGAAAGTATCTGAAGATGGTTGGATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| CDS-3UTR TCA 90 bp | TGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGAAACAGGACATGTATGGTGACTaGAAGCAATGTCTTCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLRVSIFFGYSCCFKLKQDMYGD*KQCLQG Trigger: TCCTTGAAGACATTGCTTTCAGTCACCATACATGTC...CTGTTTCAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341119.10 |
||
| CDS-3UTR TCA 90 bp | TTGGGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGAGTGGTATCTATTACTaGTGTCAGTATAGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGLESNFNNIQGCHYEDMSGIYY*CQYSSS Trigger: ACTGGAGCTATACTGACATCAGTAATAGATACCACT...CATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429674.5 ENST00000444363.5 |
||
| CDS-3UTR GCA 90 bp | CATTCTTGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGTATACCATAGTTTGTTaGCTCCCTCTTCACAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: HSCLRVSIFFGYSCCFKLYTIVC*LPLHRH Trigger: GTGTCTGTGAAGAGGGAGGCAACAAACTATGGTATA...CAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCAAGAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341119.10 ENST00000429674.5 |
||
| CDS-3UTR CCA 90 bp | GGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGTTAGGGAGTGGGTTGTTTTaGGCTTGGAGTCTAATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GLESNFNNIQGCHYEDMLGSGLF*AWSLIL Trigger: TAAAATTAGACTCCAAGCCCAAAACAACCCACTCCC...TAACATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000429674.5 ENST00000444363.5 |
||
| CDS-3UTR TCA 90 bp | GGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGTTACCAGGGGTGTCACTATaGAGATATGTTAAGTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLESNFNNIQGCHYEDMLPGVSL*RYVKFQ Trigger: TTGAAACTTAACATATCTTCATAGTGACACCCCTGG...TAACATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000429674.5 ENST00000444363.5 |
||
| CDS-3UTR GCA 90 bp | CATTCTTGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGGGTGAAAAACATTCTTaGCTAAGAGTCTCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSCLRVSIFFGYSCCFKLGEKHS*LRVSIF Trigger: GAAGATGGAGACTCTTAGGCAAGAATGTTTTTCACC...CAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCAAGAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000341119.10 ENST00000429674.5 ENST00000446236.5 |
||
| CDS-3UTR GCA 90 bp | CATTCTTGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGGTTGTGGCACATGTTTaGAAATATTGCAATTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSCLRVSIFFGYSCCFKLVVAHV*KYCNSC Trigger: GCAGGAATTGCAATATTTGCAAACATGTGCCACAAC...CAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCAAGAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341119.10 |
||
| CDS-3UTR CCA 90 bp | TACAAGAGAGCTAAAAATCAGAGGCTATTCCTGTGTGCAAACTATTTTTACCAGGGGAGTGGGTTGTTTTaGGCTTGGAGTCTAATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: YKRAKNQRLFLCANYFYQGSGLF*AWSLIL Trigger: TAAAATTAGACTCCAAGCCCAAAACAACCCACTCCC...CTGGTAAAAATAGTTTGCACACAGGAATAGCCTCTGATTTTTAGCTCTCTTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000341119.10 |
||
| CDS-3UTR CCA 90 bp | CATTCTTGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGTTACTGCACCAAATCTaGCTACAATTCCAGCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: HSCLRVSIFFGYSCCFKLLLHQI*LQFQQQ Trigger: TTGTTGCTGGAATTGTAGCCAGATTTGGTGCAGTAA...CAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCAAGAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341119.10 ENST00000429674.5 |
||
| CDS-3UTR CCA 90 bp | CAGTTACTGCACCAAATCTGGCTACAATTCCAGCAACAATTGGTATGCAGGTTTGTTTCAATTAGCGAGTaGTATCTATTACTGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLLHQIWLQFQQQLVCRFVSISE*YLLLMS Trigger: TGACATCAGTAATAGATACCACTCGCTAATTGAAAC...AAACCTGCATACCAATTGTTGCTGGAATTGTAGCCAGATTTGGTGCAGTAACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429674.5 |
||
| CDS-3UTR TCA 90 bp | GAAATACGGAAATACTTATGTACACGATTTAAATGTGCACAAGACTTGGGCTTTGAGGCAAGCATTTGTTaGAGAGGTGTCACTTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: EIRKYLCTRFKCAQDLGFEASIC*RGVTLI Trigger: TATCAAAGTGACACCTCTTCAACAAATGCTTGCCTC...AAAGCCCAAGTCTTGTGCACATTTAAATCGTGTACATAAGTATTTCCGTATTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341119.10 |
||
| CDS-3UTR TCA 90 bp | TCCATATCCCAAAAACTTGTGCCCAAGACAAAAAGAGGGAAGAATTTAAGTTTACAGATACTTTCTTGCTaGCAAATCGATGCAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SISQKLVPKTKRGKNLSLQILSC*QIDAVP Trigger: TGGAACTGCATCGATTTGTCAGCAAGAAAGTATCTG...TAAACTTAAATTCTTCCCTCTTTTTGTCTTGGGCACAAGTTTTTGGGATATGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000341119.10 |
||
| CDS-3UTR TCA 90 bp | CATTCTTGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGCATTATAATCCAGGTTaGCATATGCAAAGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSCLRVSIFFGYSCCFKLHYNPG*HMQRHR Trigger: TCTATGCCTTTGCATATGTCAACCTGGATTATAATG...CAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCAAGAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341119.10 ENST00000429674.5 ENST00000446236.5 |
||
| CDS-3UTR TCA 90 bp | CATTCTTGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGGAAAGCCCATGTGGCTaGGAGTTAAATTTATATACT | + |
|
Preference number: 4 (lower is better) Translates to: HSCLRVSIFFGYSCCFKLESPCG*ELNLYT Trigger: AGTATATAAATTTAACTCTCAGCCACATGGGCTTTC...CAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCAAGAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341119.10 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGCTTTTGTGTTTTTACTACATCAAATGGTAAAGTTGCAACAGCAGCAAGGTGAAAAACATTCTTaGCTAAGAGTCTCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSAFVFLLHQMVKLQQQQGEKHS*LRVSIF Trigger: GAAGATGGAGACTCTTAGGCAAGAATGTTTTTCACC...TTGCTGCTGTTGCAACTTTACCATTTGATGTAGTAAAAACACAAAAGCAGACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000429674.5 ENST00000446236.5 |
||
| CDS-3UTR CCA 90 bp | TACAAGAGAGCTAAAAATCAGAGGCTATTCCTGTGTGCAAACTATTTTTACCAGTTACTGCACCAAATCTaGCTACAATTCCAGCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: YKRAKNQRLFLCANYFYQLLHQI*LQFQQQ Trigger: TTGTTGCTGGAATTGTAGCCAGATTTGGTGCAGTAA...CTGGTAAAAATAGTTTGCACACAGGAATAGCCTCTGATTTTTAGCTCTCTTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000341119.10 |
||
| CDS-3UTR CCA 90 bp | TTGGGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGGTTTCAATTAGCGAGTaGTATCTATTACTGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGLESNFNNIQGCHYEDMVSISE*YLLLMS Trigger: TGACATCAGTAATAGATACCACTCGCTAATTGAAAC...CATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429674.5 ENST00000444363.5 |
||
| CDS-3UTR TCA 90 bp | AGAGCTAAAAATCAGAGGCTATTCCTGTGTGCAAACTATTTTTACCAGTCTAAATCACAGACACATAGATaGTCCATGAGTCCATTACTA | + |
|
Preference number: 4 (lower is better) Translates to: RAKNQRLFLCANYFYQSKSQTHR*SMSPLL Trigger: TAGTAATGGACTCATGGATCATCTATGTGTCTGTGA...TTTAGACTGGTAAAAATAGTTTGCACACAGGAATAGCCTCTGATTTTTAGCTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000341119.10 |
||
| CDS-3UTR TCA 90 bp | GTGTCTGCTTTTGTGTTTTTACTACATCAAATGGTAAAGTTGCAACAGCAGCAACATTATAATCCAGGTTaGCATATGCAAAGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSAFVFLLHQMVKLQQQQHYNPG*HMQRHR Trigger: TCTATGCCTTTGCATATGTCAACCTGGATTATAATG...TTGCTGCTGTTGCAACTTTACCATTTGATGTAGTAAAAACACAAAAGCAGACAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000429674.5 ENST00000446236.5 |
||
| CDS-3UTR TCA 90 bp | TACAAGAGAGCTAAAAATCAGAGGCTATTCCTGTGTGCAAACTATTTTTACCAGCAACATCATATGTATTaGAAAGTCTGGAAAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YKRAKNQRLFLCANYFYQQHHMY*KVWKAH Trigger: ATGGGCTTTCCAGACTTTTCAATACATATGATGTTG...CTGGTAAAAATAGTTTGCACACAGGAATAGCCTCTGATTTTTAGCTCTCTTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000341119.10 |
||
| CDS-3UTR GCA 90 bp | TCCATATCCCAAAAACTTGTGCCCAAGACAAAAAGAGGGAAGAATTTAAGTTTAGAGGCTATTCCTGTGTaGAAACTATTTTTACCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SISQKLVPKTKRGKNLSLEAIPV*KLFLPV Trigger: GACTGGTAAAAATAGTTTGCACACAGGAATAGCCTC...TAAACTTAAATTCTTCCCTCTTTTTGTCTTGGGCACAAGTTTTTGGGATATGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000341119.10 |
||
| CDS-3UTR GCA 90 bp | GAAATACGGAAATACTTATGTACACGATTTAAATGTGCACAAGACTTGGGCTTTTATCCCAAAAACTTGTaGCCAAGACAAAAAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EIRKYLCTRFKCAQDLGFYPKNL*PRQKEG Trigger: TCCCTCTTTTTGTCTTGGGCACAAGTTTTTGGGATA...AAAGCCCAAGTCTTGTGCACATTTAAATCGTGTACATAAGTATTTCCGTATTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000341119.10 |
||
| CDS-3UTR CCA 90 bp | TGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGAAACAGAATTCCAGCAACAATTaGTATGCAGGTTTCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLRVSIFFGYSCCFKLKQNSSNN*YAGFIF Trigger: GAAAATGAAACCTGCATACCAATTGTTGCTGGAATT...CTGTTTCAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341119.10 ENST00000429674.5 |
||
| CDS-3UTR CCA 90 bp | TACAAGAGAGCTAAAAATCAGAGGCTATTCCTGTGTGCAAACTATTTTTACCAGCCAAGAACACTGTTGTaGCACATGTTTGCAAATATT | + |
|
Preference number: 4 (lower is better) Translates to: YKRAKNQRLFLCANYFYQPRTLL*HMFANI Trigger: AATATTTGCAAACATGTGCCACAACAGTGTTCTTGG...CTGGTAAAAATAGTTTGCACACAGGAATAGCCTCTGATTTTTAGCTCTCTTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000341119.10 |
||
| CDS-3UTR CCA 90 bp | GAAATACGGAAATACTTATGTACACGATTTAAATGTGCACAAGACTTGGGCTTTCAATTCAAAAAGTTCTaGTGTATTCAACACACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EIRKYLCTRFKCAQDLGFQFKKF*CIQHTP Trigger: GGGAGTGTGTTGAATACACCAGAACTTTTTGAATTG...AAAGCCCAAGTCTTGTGCACATTTAAATCGTGTACATAAGTATTTCCGTATTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341119.10 |
||
| CDS-3UTR CCA 90 bp | TCCATATCCCAAAAACTTGTGCCCAAGACAAAAAGAGGGAAGAATTTAAGTTTATCTGGAAAGCCCATGTaGCTGAGAGTTAAATTTATA | + |
|
Preference number: 4 (lower is better) Translates to: SISQKLVPKTKRGKNLSLSGKPM*LRVKFI Trigger: TATAAATTTAACTCTCAGCCACATGGGCTTTCCAGA...TAAACTTAAATTCTTCCCTCTTTTTGTCTTGGGCACAAGTTTTTGGGATATGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000341119.10 |
||
| CDS-3UTR GCA 90 bp | TCCATATCCCAAAAACTTGTGCCCAAGACAAAAAGAGGGAAGAATTTAAGTTTAGAAAACTTCTTGGACTaGATCTTGGTTCTAATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SISQKLVPKTKRGKNLSLENFLD*ILVLIN Trigger: ATTGATTAGAACCAAGATGCAGTCCAAGAAGTTTTC...TAAACTTAAATTCTTCCCTCTTTTTGTCTTGGGCACAAGTTTTTGGGATATGGA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000341119.10 |
||
| CDS-3UTR GCA 90 bp | AGAGCTAAAAATCAGAGGCTATTCCTGTGTGCAAACTATTTTTACCAGTCTAAAGGTCGATGTAAACAATaGTATTTAACGAGTGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RAKNQRLFLCANYFYQSKGRCKQ*YLTSAL Trigger: TAAAGCACTCGTTAAATAGCATTGTTTACATCGACC...TTTAGACTGGTAAAAATAGTTTGCACACAGGAATAGCCTCTGATTTTTAGCTCT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000341119.10 |
||
| CDS-3UTR CAA 90 bp | GGAGCCCAGCCCCTCCAAAGGGAAATCCAACCATCTTCAGATACTTTCTTGCTGCACTTTGATAATCTCTaGTCCCCTTGTCTCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: GAQPLQREIQPSSDTFLLHFDNL*SPCLRI Trigger: GATCCTGAGACAAGGGGACAAGAGATTATCAAAGTG...CAGCAAGAAAGTATCTGAAGATGGTTGGATTTCCCTTTGGAGGGGCTGGGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429674.5 |
||
| CDS GCA 90 bp | TTTAACCCAGGAGGCAGAAGTTGCAATGAGCCAAGATCGCATTACTaGACTCCAGCCTGGTTTGAGTCTGTTCTTCAACTCTATGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FNPGGRSCNEPRSHY*TPAWFESVLQLYAP Trigger: TGGAGCATAGAGTTGAAGAACAGACTCAAACCAGGCTGGAGTGCAGTAATGCGATCTTGGCTCATTGCAACTTCTGCCTCCTGGGTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444363.5 |
||
| CDS-3UTR CAA 90 bp | AGGAGCCCAGCCCCTCCAAAGGGAAATCCAACCATCTTCAGATACTTTCTTGCTTGGGTTGTTTTGGGCTaGGAGTCTAATTTTAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: RSPAPPKGNPTIFRYFLAWVVLG*ESNFNN Trigger: GTTGTTAAAATTAGACTCCAAGCCCAAAACAACCCA...AGCAAGAAAGTATCTGAAGATGGTTGGATTTCCCTTTGGAGGGGCTGGGCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000429674.5 |
||
| CDS-3UTR CAA 90 bp | AGGAGCCCAGCCCCTCCAAAGGGAAATCCAACCATCTTCAGATACTTTCTTGCTTCTTCAGATACTTTCTaGCTGACAAATCGATGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RSPAPPKGNPTIFRYFLASSDTF*LTNRCS Trigger: ACTGCATCGATTTGTCAGCAAGAAAGTATCTGAAGA...AGCAAGAAAGTATCTGAAGATGGTTGGATTTCCCTTTGGAGGGGCTGGGCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429674.5 |
||
| CDS-3UTR CAA 90 bp | GCCTCTCTGACTCCACTACCAGCATTCACAATTTCTCACGCTCCTTTGTGTTCTACAGCATCACTAGTATaGCTGCCTTCGAACATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASLTPLPAFTISHAPLCSTASLV*LPSNIL Trigger: CAAAATGTTCGAAGGCAGCAATACTAGTGATGCTGT...AGAACACAAAGGAGCGTGAGAAATTGTGAATGCTGGTAGTGGAGTCAGAGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446236.5 |
||
| CDS-3UTR CAA 90 bp | ATCTCTAAGAACAGTAGGAGCCCAGCCCCTCCAAAGGGAAATCCAACCATCTTCGAGTCTCCATCTTCTTaGGCTATAGTTGTTGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ISKNSRSPAPPKGNPTIFESPSS*AIVVVS Trigger: TGAAACAACAACTATAGCCAAAGAAGATGGAGACTC...GAAGATGGTTGGATTTCCCTTTGGAGGGGCTGGGCTCCTACTGTTCTTAGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429674.5 |
||
| CDS-3UTR CAA 90 bp | AATTCCAACCAAGCCTCTCTGACTCCACTACCAGCATTCACAATTTCTCACGCTGCCCCTGAAGTAAAGTaGATCATAAATGTTGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NSNQASLTPLPAFTISHAAPEVK*IINVGS Trigger: TGAGCCAACATTTATGATCAACTTTACTTCAGGGGC...AGCGTGAGAAATTGTGAATGCTGGTAGTGGAGTCAGAGAGGCTTGGTTGGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446236.5 |
||
| CDS-3UTR CAA 90 bp | AGAGCTAAAAATCAGAGGCTATTCCTGTGTGCAAACTATTTTTACCAGTCTAAACCCACCCTCCACCCTTaGATAGGCCCCAGTACATGT | + |
|
Preference number: 5 (lower is better) Translates to: RAKNQRLFLCANYFYQSKPTLHP*IGPSTC Trigger: ACATGTACTGGGGCCTATCAAAGGGTGGAGGGTGGG...TTTAGACTGGTAAAAATAGTTTGCACACAGGAATAGCCTCTGATTTTTAGCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000341119.10 |
||
| CDS-3UTR CAA 90 bp | TTGGGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGGCACTCCAGCCTGGTTaGAGTCTGTTCTTCAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGLESNFNNIQGCHYEDMALQPG*SLFFNS Trigger: AGAGTTGAAGAACAGACTCAAACCAGGCTGGAGTGC...CATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444363.5 |
||
| CDS-3UTR CAA 90 bp | TTGGGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGGGGGAGTGGGTTGTTTaGGGCTTGGAGTCTAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: LGLESNFNNIQGCHYEDMGEWVV*GLESNF Trigger: AAAATTAGACTCCAAGCCCAAAACAACCCACTCCCC...CATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000429674.5 ENST00000444363.5 |
||
| CDS TCA 90 bp | ATTACTGATGTCAGTATAGCTCCAGTACATGAGGCAAGCATTTGTTaGAGAGGTGTCACTTTGATAATCTCTTGTCCCCTTGTCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ITDVSIAPVHEASIC*RGVTLIISCPLVSG Trigger: TCCTGAGACAAGGGGACAAGAGATTATCAAAGTGACACCTCTTCAACAAATGCTTGCCTCATGTACTGGAGCTATACTGACATCAGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000341119.10 ENST00000429674.5 ENST00000444363.5 ENST00000491499.1 |
||
| CDS-3UTR CAA 90 bp | GGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGTTAGGGGAGTGGGTTGTTTaGGGCTTGGAGTCTAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: GLESNFNNIQGCHYEDMLGEWVV*GLESNF Trigger: AAAATTAGACTCCAAGCCCAAAACAACCCACTCCCC...TAACATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000429674.5 ENST00000444363.5 |
||
| CDS-3UTR CAA 90 bp | TGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGAAACAGCACTTTGATAATCTCTaGTCCCCTTGTCTCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: CLRVSIFFGYSCCFKLKQHFDNL*SPCLRI Trigger: GATCCTGAGACAAGGGGACAAGAGATTATCAAAGTG...CTGTTTCAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341119.10 ENST00000429674.5 |
||
| CDS-3UTR CAA 90 bp | GGCTTGGAGTCTAATTTTAACAACATCCAGGGGTGTCACTATGAAGATATGTTACACTTTGATAATCTCTaGTCCCCTTGTCTCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: GLESNFNNIQGCHYEDMLHFDNL*SPCLRI Trigger: GATCCTGAGACAAGGGGACAAGAGATTATCAAAGTG...TAACATATCTTCATAGTGACACCCCTGGATGTTGTTAAAATTAGACTCCAAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000429674.5 ENST00000444363.5 |
||
| CDS-3UTR CAA 90 bp | TCAATTCTAGTGGACTTATCACAGTTACTGCACCAAATCTGGCTACAATTCCAGTTATACCATAGTTTGTaGCCTCCCTCTTCACAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SILVDLSQLLHQIWLQFQLYHSL*PPSSQT Trigger: TGTCTGTGAAGAGGGAGGCAACAAACTATGGTATAA...CTGGAATTGTAGCCAGATTTGGTGCAGTAACTGTGATAAGTCCACTAGAATTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429674.5 |
||
| CDS-3UTR CAA 90 bp | AAGGGAAATCCAACCATCTTCAGATACTTTCTTGCTGACAAATCGATGCAGTTCTTCTTATACCATAGTTaGTTGCCTCCCTCTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: KGNPTIFRYFLADKSMQFFLYHS*LPPSSQ Trigger: CTGTGAAGAGGGAGGCAACAAACTATGGTATAAGAA...GAACTGCATCGATTTGTCAGCAAGAAAGTATCTGAAGATGGTTGGATTTCCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429674.5 |
||
| CDS-3UTR CAA 90 bp | GACTGCATCTTGGTTCTAATCAATTCTAGTGGACTTATCACAGTTACTGCACCAACAGCATCACTAGTATaGCTGCCTTCGAACATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DCILVLINSSGLITVTAPTASLV*LPSNIL Trigger: CAAAATGTTCGAAGGCAGCAATACTAGTGATGCTGT...TGGTGCAGTAACTGTGATAAGTCCACTAGAATTGATTAGAACCAAGATGCAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429674.5 |
||
| CDS-3UTR CAA 90 bp | GAAATACGGAAATACTTATGTACACGATTTAAATGTGCACAAGACTTGGGCTTTGGGGAGTGGGTTGTTTaGGGCTTGGAGTCTAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: EIRKYLCTRFKCAQDLGFGEWVV*GLESNF Trigger: AAAATTAGACTCCAAGCCCAAAACAACCCACTCCCC...AAAGCCCAAGTCTTGTGCACATTTAAATCGTGTACATAAGTATTTCCGTATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR CAA 90 bp | GAAATCCAACCATCTTCAGATACTTTCTTGCTGACAAATCGATGCAGTTCCACGTTCTTGGACTGCATCTaGGTTCTAATCAATTCTAGT | + |
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Preference number: 5 (lower is better) Translates to: EIQPSSDTFLLTNRCSSTFLDCI*VLINSS Trigger: ACTAGAATTGATTAGAACCAAGATGCAGTCCAAGAA...CGTGGAACTGCATCGATTTGTCAGCAAGAAAGTATCTGAAGATGGTTGGATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429674.5 |
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| CDS-3UTR CAA 90 bp | CATTCTTGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGACTGAACACCCAAGTTaGACTGAAGTGAACATTTGC | + |
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Preference number: 5 (lower is better) Translates to: HSCLRVSIFFGYSCCFKLTEHPS*TEVNIC Trigger: GCAAATGTTCACTTCAGTCAAACTTGGGTGTTCAGT...CAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCAAGAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR CAA 90 bp | TGCCTAAGAGTCTCCATCTTCTTTGGCTATAGTTGTTGTTTCAAGTTGAAACAGAGTTATACCAGTACATaGCTGAGAAAGGTACATCTC | + |
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Preference number: 5 (lower is better) Translates to: CLRVSIFFGYSCCFKLKQSYTST*LRKVHL Trigger: GAGATGTACCTTTCTCAGCAATGTACTGGTATAACT...CTGTTTCAACTTGAAACAACAACTATAGCCAAAGAAGATGGAGACTCTTAGGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR CAA 90 bp | TACAAGAGAGCTAAAAATCAGAGGCTATTCCTGTGTGCAAACTATTTTTACCAGTGGGTTGTTTTGGGCTaGGAGTCTAATTTTAACAAC | + |
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Preference number: 5 (lower is better) Translates to: YKRAKNQRLFLCANYFYQWVVLG*ESNFNN Trigger: GTTGTTAAAATTAGACTCCAAGCCCAAAACAACCCA...CTGGTAAAAATAGTTTGCACACAGGAATAGCCTCTGATTTTTAGCTCTCTTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR CAA 90 bp | GAAATACGGAAATACTTATGTACACGATTTAAATGTGCACAAGACTTGGGCTTTTTATACCATAGTTTGTaGCCTCCCTCTTCACAGACA | + |
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Preference number: 5 (lower is better) Translates to: EIRKYLCTRFKCAQDLGFLYHSL*PPSSQT Trigger: TGTCTGTGAAGAGGGAGGCAACAAACTATGGTATAA...AAAGCCCAAGTCTTGTGCACATTTAAATCGTGTACATAAGTATTTCCGTATTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR CAA 90 bp | AGAGCTAAAAATCAGAGGCTATTCCTGTGTGCAAACTATTTTTACCAGTCTAAATTCTTATACCATAGTTaGTTGCCTCCCTCTTCACAG | + |
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Preference number: 5 (lower is better) Translates to: RAKNQRLFLCANYFYQSKFLYHS*LPPSSQ Trigger: CTGTGAAGAGGGAGGCAACAAACTATGGTATAAGAA...TTTAGACTGGTAAAAATAGTTTGCACACAGGAATAGCCTCTGATTTTTAGCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR CAA 90 bp | AGAGCTAAAAATCAGAGGCTATTCCTGTGTGCAAACTATTTTTACCAGTCTAAAGCCCCTGAAGTAAAGTaGATCATAAATGTTGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: RAKNQRLFLCANYFYQSKAPEVK*IINVGS Trigger: TGAGCCAACATTTATGATCAACTTTACTTCAGGGGC...TTTAGACTGGTAAAAATAGTTTGCACACAGGAATAGCCTCTGATTTTTAGCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR CAA 90 bp | TACAAGAGAGCTAAAAATCAGAGGCTATTCCTGTGTGCAAACTATTTTTACCAGCATCAAATGGTAAAGTaGCAACAGCAGCAAAAGAAC | + |
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Preference number: 5 (lower is better) Translates to: YKRAKNQRLFLCANYFYQHQMVK*QQQQKN Trigger: GTTCTTTTGCTGCTGTTGCAACTTTACCATTTGATG...CTGGTAAAAATAGTTTGCACACAGGAATAGCCTCTGATTTTTAGCTCTCTTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR CAA 90 bp | TCCATATCCCAAAAACTTGTGCCCAAGACAAAAAGAGGGAAGAATTTAAGTTTAACAGCATCACTAGTATaGCTGCCTTCGAACATTTTG | + |
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Preference number: 5 (lower is better) Translates to: SISQKLVPKTKRGKNLSLTASLV*LPSNIL Trigger: CAAAATGTTCGAAGGCAGCAATACTAGTGATGCTGT...TAAACTTAAATTCTTCCCTCTTTTTGTCTTGGGCACAAGTTTTTGGGATATGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR CAA 90 bp | AGAGCTAAAAATCAGAGGCTATTCCTGTGTGCAAACTATTTTTACCAGTCTAAACAAGGAAACAGCTTCTaGTTTAGCCTCTTACTCTAC | + |
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Preference number: 5 (lower is better) Translates to: RAKNQRLFLCANYFYQSKQGNSF*FSLLLY Trigger: GTAGAGTAAGAGGCTAAACAAGAAGCTGTTTCCTTG...TTTAGACTGGTAAAAATAGTTTGCACACAGGAATAGCCTCTGATTTTTAGCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR CAA 90 bp | TCCATATCCCAAAAACTTGTGCCCAAGACAAAAAGAGGGAAGAATTTAAGTTTACCATATCCCAAAAACTaGTGCCCAAGACAAAAAGAG | + |
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Preference number: 5 (lower is better) Translates to: SISQKLVPKTKRGKNLSLPYPKN*CPRQKE Trigger: CTCTTTTTGTCTTGGGCACAAGTTTTTGGGATATGG...TAAACTTAAATTCTTCCCTCTTTTTGTCTTGGGCACAAGTTTTTGGGATATGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR CAA 90 bp | GAAATACGGAAATACTTATGTACACGATTTAAATGTGCACAAGACTTGGGCTTTTCTTCAGATACTTTCTaGCTGACAAATCGATGCAGT | + |
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Preference number: 5 (lower is better) Translates to: EIRKYLCTRFKCAQDLGFSSDTF*LTNRCS Trigger: ACTGCATCGATTTGTCAGCAAGAAAGTATCTGAAGA...AAAGCCCAAGTCTTGTGCACATTTAAATCGTGTACATAAGTATTTCCGTATTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR CAA 90 bp | AGAGCTAAAAATCAGAGGCTATTCCTGTGTGCAAACTATTTTTACCAGTCTAAAGAGTCTCCATCTTCTTaGGCTATAGTTGTTGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: RAKNQRLFLCANYFYQSKESPSS*AIVVVS Trigger: TGAAACAACAACTATAGCCAAAGAAGATGGAGACTC...TTTAGACTGGTAAAAATAGTTTGCACACAGGAATAGCCTCTGATTTTTAGCTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR CAA 90 bp | GAAATACGGAAATACTTATGTACACGATTTAAATGTGCACAAGACTTGGGCTTTTGTTGTGGCACATGTTaGCAAATATTGCAATTCCTG | + |
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Preference number: 5 (lower is better) Translates to: EIRKYLCTRFKCAQDLGFCCGTC*QILQFL Trigger: CAGGAATTGCAATATTTGCAAACATGTGCCACAACA...AAAGCCCAAGTCTTGTGCACATTTAAATCGTGTACATAAGTATTTCCGTATTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS-3UTR CAA 90 bp | GTTTTTACTACATCAAATGGTAAAGTTGCAACAGCAGCAAATTTCCTGAGGTCAATTTCTCACGCTCCTTaGTGTTCTATTATTCAGAAC | + |
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Preference number: 5 (lower is better) Translates to: VFTTSNGKVATAANFLRSISHAP*CSIIQN Trigger: GTTCTGAATAATAGAACACAAAGGAGCGTGAGAAAT...TGACCTCAGGAAATTTGCTGCTGTTGCAACTTTACCATTTGATGTAGTAAAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446236.5 |
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| CDS-3UTR CAA 90 bp | GAAATACGGAAATACTTATGTACACGATTTAAATGTGCACAAGACTTGGGCTTTTTCTTGGACTGCATCTaGGTTCTAATCAATTCTAGT | + |
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Preference number: 5 (lower is better) Translates to: EIRKYLCTRFKCAQDLGFFLDCI*VLINSS Trigger: ACTAGAATTGATTAGAACCAAGATGCAGTCCAAGAA...AAAGCCCAAGTCTTGTGCACATTTAAATCGTGTACATAAGTATTTCCGTATTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341119.10 |
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| CDS CCA 72 bp | CGAGAGCCCGGGTCTGAGACTGAGAGAGCAACGGAATaGAGGCGGGGTAGAGGCGGAAACACAACCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: REPGSETERATE*RRGRGGNTTCR Trigger: CCTGCAGGTTGTGTTTCCGCCTCTACCCCGCCTCCATTCCGTTGCTCTCTCAGTCTCAGACCCGGGCTCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341119.10 ENST00000444363.5 |
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| CDS CAA 72 bp | ACTCCACTACCAGCATTCACAATTTCTCACGCTCCTTaGTGTTCTATTATTCAGAACCAGACAATGCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: TPLPAFTISHAP*CSIIQNQTMPL Trigger: CAGGGGCATTGTCTGGTTCTGAATAATAGAACACAAAGGAGCGTGAGAAATTGTGAATGCTGGTAGTGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446236.5 |
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| CDS TCA 72 bp | GTCAGTATAGCTCCAGTACATGAGGCAAGCATTTGTTaGAGAGGTGTCACTTTGATAATCTCTTGTCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: VSIAPVHEASIC*RGVTLIISCPL Trigger: AAGGGGACAAGAGATTATCAAAGTGACACCTCTTCAACAAATGCTTGCCTCATGTACTGGAGCTATACTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000341119.10 ENST00000429674.5 ENST00000444363.5 ENST00000491499.1 |
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| CDS CAA 72 bp | ACTCCACTACCAGCATTCACAATTTCTCACGCTCCTTaGTGTTCTATTATTCCTTTACATCACAAGAAGATA | + |
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Preference number: 6 (lower is better) Translates to: TPLPAFTISHAP*CSIIPLHHKKI Trigger: TATCTTCTTGTGATGTAAAGGAATAATAGAACACAAAGGAGCGTGAGAAATTGTGAATGCTGGTAGTGGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470328.1 |
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