RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC25A37 (Homo sapiens)

Ensembl gene IDs: ENSG00000147454

Ensembl transcript IDs: ENST00000290075.10, ENST00000417331.6, ENST00000517923.1, ENST00000518881.5, ENST00000519192.1, ENST00000519973.6, ENST00000520654.1, ENST00000520949.1, ENST00000521637.1, ENST00000522164.5, ENST00000523883.5, ENST00000523930.1

Found 404 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTAGCACCACTCAAAAGAATCCAGGCCTGCGCCTCCTCGGTAAGATaGACCACGCTGACCGTGATGGGTGGCGGCAGGTCAGGACCCGGC +
Preference number: 1 (lower is better)
Translates to: VAPLKRIQACASSVR*TTLTVMGGGRSGPG
Trigger: GCCGGGTCCTGACCTGCCGCCACCCATCACGGTCAGCGTGGTGCATCTTACCGAGGAGGCGCAGGCCTGGATTCTTTTGAGTGGTGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR TCA 90 bp AGAAGGCCCCCAACCCCTCGGTCCTCCACACCGTCCGGATGCAGCTaGTTGCTGACCGGTGCTGCGAGTTGTACATCTGCAAGCGCTGCT +
Preference number: 1 (lower is better)
Translates to: RRPPTPRSSTPSGCS*LLTGAASCTSASAA
Trigger: AGCAGCGCTTGCAGATGTACAACTCGCAGCACCGGTCAGCAATCAGCTGCATCCGGACGGTGTGGAGGACCGAGGGGTTGGGGGCCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
3UTR TCA 90 bp GGTACACCGTCCGGAAGGCATTGGCCATACCCGACAGCCGGCCGCTaGTGTTGGCCAGCGAGAGGGCCACGTTCTCCTGAGTGTTCAGAA +
Preference number: 1 (lower is better)
Translates to: GTPSGRHWPYPTAGR*CWPARGPRSPECSE
Trigger: TTCTGAACACTCAGGAGAACGTGGCCCTCTCGCTGGCCAACATCAGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGGTGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
3UTR TCA 90 bp AAGGATGCAGAATGGCTTCTGGAGAGGGGTCTTCCGACTCGGGCATaGGGGTCCAGGTCAGACCTCAGCCGCAGGGCCCTAGCAGATAGG +
Preference number: 1 (lower is better)
Translates to: KDAEWLLERGLPTRA*GSRSDLSRRALADR
Trigger: CCTATCTGCTAGGGCCCTGCGGCTGAGGTCTGACCTGGACCCTCATGCCCGAGTCGGAAGACCCCTCTCCAGAAGCCATTCTGCATCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR CCA 90 bp GGCCTGCGCCTCCTCGGTAAGATGCACCACGCTGACCGTGATGGGTaGCGGCAGGTCAGGACCCGGCTCACTGAAATGCAAACATACATG +
Preference number: 1 (lower is better)
Translates to: GLRLLGKMHHADRDG*RQVRTRLTEMQTYM
Trigger: CATGTATGTTTGCATTTCAGTGAGCCGGGTCCTGACCTGCCGCCACCCATCACGGTCAGCGTGGTGCATCTTACCGAGGAGGCGCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR GCA 90 bp AGGCTGCGAAGCCTGTGTTCTCGGGTGACGCAGAGCAGACAAGGATaGAGAATGGCTTCTGGAGAGGGGTCTTCCGACTCGGGCATGAGG +
Preference number: 1 (lower is better)
Translates to: RLRSLCSRVTQSRQG*RMASGEGSSDSGMR
Trigger: CCTCATGCCCGAGTCGGAAGACCCCTCTCCAGAAGCCATTCTGCATCCTTGTCTGCTCTGCGTCACCCGAGAACACAGGCTTCGCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR CCA 90 bp AGGAAGCAGTCTCAGCAGGTTTATGCCCAGTCACCCCAATTCTACTaGGCTCCACCACCCTCCAGCGGGCGAGATCCTGCCACCCAGCAT +
Preference number: 1 (lower is better)
Translates to: RKQSQQVYAQSPQFY*APPPSSGRDPATQH
Trigger: ATGCTGGGTGGCAGGATCTCGCCCGCTGGAGGGTGGTGGAGCCCAGTAGAATTGGGGTGACTGGGCATAAACCTGCTGAGACTGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR CCA 90 bp GTGTTCTCGGGTGACGCAGAGCAGACAAGGATGCAGAATGGCTTCTaGAGAGGGGTCTTCCGACTCGGGCATGAGGGTCCAGGTCAGACC +
Preference number: 1 (lower is better)
Translates to: VFSGDAEQTRMQNGF*RGVFRLGHEGPGQT
Trigger: GGTCTGACCTGGACCCTCATGCCCGAGTCGGAAGACCCCTCTCCAGAAGCCATTCTGCATCCTTGTCTGCTCTGCGTCACCCGAGAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR CCA 90 bp TCTGAGTTCTTTATTCGTGAGCAAGCGGGCCGAAGTCGAGGCGGCTaGGTCACAGGGAGGAACACCCTGGGGAGGGACGTGTTGAAGAAG +
Preference number: 1 (lower is better)
Translates to: SEFFIREQAGRSRGG*VTGRNTLGRDVLKK
Trigger: CTTCTTCAACACGTCCCTCCCCAGGGTGTTCCTCCCTGTGACCCAGCCGCCTCGACTTCGGCCCGCTTGCTCACGAATAAAGAACTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290075.10
3UTR GCA 90 bp TGTGTGCGCGCGCGTGTGTGTGCGTGCGTGTGTCTGGGTGTGCATTaGACACACAACTCTGAGTTCTTTATTCGTGAGCAAGCGGGCCGA +
Preference number: 1 (lower is better)
Translates to: CVRARVCACVCLGVH*THNSEFFIREQAGR
Trigger: TCGGCCCGCTTGCTCACGAATAAAGAACTCAGAGTTGTGTGTGCAATGCACACCCAGACACACGCACGCACACACACGCGCGCGCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290075.10
3UTR TCA 90 bp GCCCCACAAGTCGCCAAATGCTGCCTATCAAGGGCTTCTAAGTGCTaGCCGGGGAAGGCAGGCATTCACATCACTCACAACCAGGGAAGG +
Preference number: 1 (lower is better)
Translates to: APQVAKCCLSRASKC*PGKAGIHITHNQGR
Trigger: CCTTCCCTGGTTGTGAGTGATGTGAATGCCTGCCTTCCCCGGTCAGCACTTAGAAGCCCTTGATAGGCAGCATTTGGCGACTTGTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR GCA 90 bp GCATGTGTGTGCGCGCGCGTGTGTGTGCGTGCGTGTGTCTGGGTGTaGATTGCACACACAACTCTGAGTTCTTTATTCGTGAGCAAGCGG +
Preference number: 1 (lower is better)
Translates to: ACVCARVCVRACVWV*IAHTTLSSLFVSKR
Trigger: CCGCTTGCTCACGAATAAAGAACTCAGAGTTGTGTGTGCAATGCACACCCAGACACACGCACGCACACACACGCGCGCGCACACACATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290075.10
3UTR GCA 90 bp TCACATCACTCACAACCAGGGAAGGAAGCAGTCTCAGCAGGTTTATaGCCAGTCACCCCAATTCTACTGGGCTCCACCACCCTCCAGCGG +
Preference number: 1 (lower is better)
Translates to: SHHSQPGKEAVSAGL*PVTPILLGSTTLQR
Trigger: CCGCTGGAGGGTGGTGGAGCCCAGTAGAATTGGGGTGACTGGGCATAAACCTGCTGAGACTGCTTCCTTCCCTGGTTGTGAGTGATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR TCA 90 bp GGTGGCGGCAGGTCAGGACCCGGCTCACTGAAATGCAAACATACATaGGCTTCCTGCTCATTTTTAAAGACAAGCTCCGGTGAGGGCTCC +
Preference number: 1 (lower is better)
Translates to: GGGRSGPGSLKCKHT*ASCSFLKTSSGEGS
Trigger: GGAGCCCTCACCGGAGCTTGTCTTTAAAAATGAGCAGGAAGCTCATGTATGTTTGCATTTCAGTGAGCCGGGTCCTGACCTGCCGCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR TCA 90 bp TTCCCTCCTCTGGGATCTAAGGATCCAGGGAGGAGGCTGCCACAGTaGAGCAGAAAAGCTACATTCTGCCCAGGGAGGAAGAGAAAAAGC +
Preference number: 1 (lower is better)
Translates to: FPPLGSKDPGRRLPQ*SRKATFCPGRKRKS
Trigger: GCTTTTTCTCTTCCTCCCTGGGCAGAATGTAGCTTTTCTGCTTCACTGTGGCAGCCTCCTCCCTGGATCCTTAGATCCCAGAGGAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000519973.6
3UTR CCA 90 bp TGCAAGCGCTGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTaGAGCAGGGTGGCCATACTCCCAGCTATCCCTGCAAAACAAACT +
Preference number: 1 (lower is better)
Translates to: CKRCFTTSAGFITAS*SRVAILPAIPAKQT
Trigger: AGTTTGTTTTGCAGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCAGCGCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417331.6
3UTR TCA 90 bp GTGGCACTAACTGGCTGCAGATGTCACTCCAAAGACACCAATGACTaGGTACGTGCAAAGGTTACACTGAATTGGTCACCAGGGTGGGAT +
Preference number: 1 (lower is better)
Translates to: VALTGCRCHSKDTND*VRAKVTLNWSPGWD
Trigger: ATCCCACCCTGGTGACCAATTCAGTGTAACCTTTGCACGTACTCAGTCATTGGTGTCTTTGGAGTGACATCTGCAGCCAGTTAGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR TCA 90 bp TCAGGTGGCACTAACTGGCTGCAGATGTCACTCCAAAGACACCAATaGCTGAGTACGTGCAAAGGTTACACTGAATTGGTCACCAGGGTG +
Preference number: 1 (lower is better)
Translates to: SGGTNWLQMSLQRHQ*LSTCKGYTELVTRV
Trigger: CACCCTGGTGACCAATTCAGTGTAACCTTTGCACGTACTCAGTCATTGGTGTCTTTGGAGTGACATCTGCAGCCAGTTAGTGCCACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR CCA 90 bp AGGGCAAAATCTACTCCCCAAGGCACTGTGTGCATGGTCCCAAGATaGAAATTCTCCACGTGTTACTTCCTAGGCAGTAGCACCACTCAA +
Preference number: 1 (lower is better)
Translates to: RAKSTPQGTVCMVPR*KFSTCYFLGSSTTQ
Trigger: TTGAGTGGTGCTACTGCCTAGGAAGTAACACGTGGAGAATTTCCATCTTGGGACCATGCACACAGTGCCTTGGGGAGTAGATTTTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR TCA 90 bp CAAACATACATGAGCTTCCTGCTCATTTTTAAAGACAAGCTCCGGTaGGGGCTCCAAATCAGAGACAGTGCAGCTCGTCTCGTCGGTATT +
Preference number: 1 (lower is better)
Translates to: QTYMSFLLIFKDKLR*GLQIRDSAARLVGI
Trigger: AATACCGACGAGACGAGCTGCACTGTCTCTGATTTGGAGCCCTCACCGGAGCTTGTCTTTAAAAATGAGCAGGAAGCTCATGTATGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR GCA 90 bp TTCTTCATCGCTATTAGGGCAAAATCTACTCCCCAAGGCACTGTGTaGATGGTCCCAAGATGGAAATTCTCCACGTGTTACTTCCTAGGC +
Preference number: 1 (lower is better)
Translates to: FFIAIRAKSTPQGTV*MVPRWKFSTCYFLG
Trigger: GCCTAGGAAGTAACACGTGGAGAATTTCCATCTTGGGACCATGCACACAGTGCCTTGGGGAGTAGATTTTGCCCTAATAGCGATGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR TCA 90 bp AAAGGAGTGCTCCTAGAGAAATCAAGTTTATTTTCTAAACACCAGTaGAAGCAAAATCCAGTAGGAAATACCTTGCTTCAGCGTGGCATA +
Preference number: 1 (lower is better)
Translates to: KGVLLEKSSLFSKHQ*KQNPVGNTLLQRGI
Trigger: TATGCCACGCTGAAGCAAGGTATTTCCTACTGGATTTTGCTTTCACTGGTGTTTAGAAAATAAACTTGATTTCTCTAGGAGCACTCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR CCA 90 bp GCCCCCAACCCCTCGGTCCTCCACACCGTCCGGATGCAGCTGATTGCTGACCGGCGAAGTCGAGGCGGCTaGGTCACAGGGAGGAACACC +
Preference number: 2 (lower is better)
Translates to: APNPSVLHTVRMQLIADRRSRGG*VTGRNT
Trigger: GGTGTTCCTCCCTGTGACCCAGCCGCCTCGACTTCG...CCGGTCAGCAATCAGCTGCATCCGGACGGTGTGGAGGACCGAGGGGTTGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290075.10
3UTR-3UTR GCA 90 bp GGGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTTCCGGTGAGCGGCCGTaGCGTCCCCTCCTCTCTCTA +
Preference number: 2 (lower is better)
Translates to: GRGLQSGPTELQGPVFAFSGERP*RPLLSL
Trigger: TAGAGAGAGGAGGGGACGGCACGGCCGCTCACCGGA...AAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR TCA 90 bp GCGTGGTGTAGCTCCGGTAGAAGGCCCCCAACCCCTCGGTCCTCCACACCGTCCGATGCAGCTGATTGCTaGCCGGTGCTGCGAGTTGTA +
Preference number: 2 (lower is better)
Translates to: AWCSSGRRPPTPRSSTPSDAADC*PVLRVV
Trigger: TACAACTCGCAGCACCGGTCAGCAATCAGCTGCATC...GGACGGTGTGGAGGACCGAGGGGTTGGGGGCCTTCTACCGGAGCTACACCACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
3UTR-3UTR CCA 90 bp TCCGACTCGGGCATGAGGGTCCAGGTCAGACCTCAGCCGCAGGGCCCTAGCAGATCACCCCAATTCTACTaGGCTCCACCACCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: SDSGMRVQVRPQPQGPSRSPQFY*APPPSS
Trigger: GCTGGAGGGTGGTGGAGCCCAGTAGAATTGGGGTGA...TCTGCTAGGGCCCTGCGGCTGAGGTCTGACCTGGACCCTCATGCCCGAGTCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR TCA 90 bp GCGAGAGGGCCACGTTCTCCTGAGTGTTCAGAAGGGTCTTACAGACGTCCAGGGCCAGCCCGCCTGAGATaGTGTGGGACTGCGGGTTGT +
Preference number: 2 (lower is better)
Translates to: ARGPRSPECSEGSYRRPGPARLR*CGTAGC
Trigger: ACAACCCGCAGTCCCACATCATCTCAGGCGGGCTGG...CCCTGGACGTCTGTAAGACCCTTCTGAACACTCAGGAGAACGTGGCCCTCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
3UTR-3UTR CCA 90 bp GGGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTGAGAGGGCAAGGGGCTaGATGCAGGCAGAGAATGAC +
Preference number: 2 (lower is better)
Translates to: GRGLQSGPTELQGPVFAFERARG*MQAEND
Trigger: GTCATTCTCTGCCTGCATCCAGCCCCTTGCCCTCTC...AAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR GCA 90 bp GCTCCGGTAGAAGGCCCCCAACCCCTCGGTCCTCCACACCGTCCGGATGCAGCTTGTCTGGGTGTGCATTaGACACACAACTCTGAGTTC +
Preference number: 2 (lower is better)
Translates to: APVEGPQPLGPPHRPDAACLGVH*THNSEF
Trigger: GAACTCAGAGTTGTGTGTGCAATGCACACCCAGACA...AGCTGCATCCGGACGGTGTGGAGGACCGAGGGGTTGGGGGCCTTCTACCGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290075.10
3UTR-3UTR GCA 90 bp TCTTCCGACTCGGGCATGAGGGTCCAGGTCAGACCTCAGCCGCAGGGCCCTAGCCCACAAGTCGCCAAATaGTGCCTATCAAGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: SSDSGMRVQVRPQPQGPSPQVAK*CLSRAS
Trigger: AGAAGCCCTTGATAGGCAGCATTTGGCGACTTGTGG...GCTAGGGCCCTGCGGCTGAGGTCTGACCTGGACCCTCATGCCCGAGTCGGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR CAA 90 bp GGGCTCCAAATCAGAGACAGTGCAGCTCGTCTCGTCGGTATTCCCTaGCACGGCAGCCTGGCAGAGCACCAAATGGCACAGCTAGGGAAA +
Preference number: 2 (lower is better)
Translates to: GLQIRDSAARLVGIP*HGSLAEHQMAQLGK
Trigger: TTTCCCTAGCTGTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGACGAGACGAGCTGCACTGTCTCTGATTTGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR GCA 90 bp GGCGGTGGAGGGCATCTGGTAGATGACACGCGCCTGGATGCCTTTGAAGTAGCCGCGTGTGTCTGGGTGTaGATTGCACACACAACTCTG +
Preference number: 2 (lower is better)
Translates to: GGGGHLVDDTRLDAFEVAACVWV*IAHTTL
Trigger: CAGAGTTGTGTGTGCAATGCACACCCAGACACACGC...GGCTACTTCAAAGGCATCCAGGCGCGTGTCATCTACCAGATGCCCTCCACCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290075.10
3UTR-3UTR CCA 90 bp GACAGTGCAGCTCGTCTCGTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACGACAGGGACAAAGACTaGAGACATGCTTCCCTAGAC +
Preference number: 2 (lower is better)
Translates to: DSAARLVGIPLHGSLAEHDRDKD*RHASLD
Trigger: GTCTAGGGAAGCATGTCTCCAGTCTTTGTCCCTGTC...GTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGACGAGACGAGCTGCACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR TCA 90 bp GGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTCGCTCTTTCCCATCCCTaGTCTGAAAAAGGAACTCCA +
Preference number: 2 (lower is better)
Translates to: GGACNQGPQSSRVRFLPFALSHP*SEKGTP
Trigger: TGGAGTTCCTTTTTCAGATCAGGGATGGGAAAGAGC...GAAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR GCA 90 bp CAAGCTCCGGTGAGGGCTCCAAATCAGAGACAGTGCAGCTCGTCTCGTCGGTATTTCAGAAAGCGAGGCTaGGAAGCCTGTGTTCTCGGG +
Preference number: 2 (lower is better)
Translates to: QAPVRAPNQRQCSSSRRYFRKRG*EACVLG
Trigger: CCCGAGAACACAGGCTTCGCAGCCTCGCTTTCTGAA...ATACCGACGAGACGAGCTGCACTGTCTCTGATTTGGAGCCCTCACCGGAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR CAA 90 bp CTCCACACCGTCCGGATGCAGCTGATTGCTGACCGGTGCTGCGAGTaGTACATCTGCAAGCGCTGCTTCACCACTTCTGCTGGATTCATT +
Preference number: 2 (lower is better)
Translates to: LHTVRMQLIADRCCE*YICKRCFTTSAGFI
Trigger: AATGAATCCAGCAGAAGTGGTGAAGCAGCGCTTGCAGATGTACAACTCGCAGCACCGGTCAGCAATCAGCTGCATCCGGACGGTGTGGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
3UTR-3UTR GCA 90 bp CTGCGAAGCCTGTGTTCTCGGGTGACGCAGAGCAGACAAGGATGCAGAATGGCTGGGGCTAAACACAGCTaGCGGCCACATTCACTGATT +
Preference number: 2 (lower is better)
Translates to: LRSLCSRVTQSRQGCRMAGAKHS*RPHSLI
Trigger: AATCAGTGAATGTGGCCGGCAGCTGTGTTTAGCCCC...AGCCATTCTGCATCCTTGTCTGCTCTGCGTCACCCGAGAACACAGGCTTCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR GCA 90 bp CTGCGAAGCCTGTGTTCTCGGGTGACGCAGAGCAGACAAGGATGCAGAATGGCTCAAAGACTGGAGACATaGTTCCCTAGACTGCACAGG +
Preference number: 2 (lower is better)
Translates to: LRSLCSRVTQSRQGCRMAQRLET*FPRLHR
Trigger: CCTGTGCAGTCTAGGGAAGCATGTCTCCAGTCTTTG...AGCCATTCTGCATCCTTGTCTGCTCTGCGTCACCCGAGAACACAGGCTTCGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR TCA 90 bp GTGGACTTTACGGCTTTCTACATCCCCATGTGGGTTGAGGCTGCAACTGGTTTTAGGGCTTCTAAGTGCTaGCCGGGGAAGGCAGGCATT +
Preference number: 2 (lower is better)
Translates to: VDFTAFYIPMWVEAATGFRASKC*PGKAGI
Trigger: AATGCCTGCCTTCCCCGGTCAGCACTTAGAAGCCCT...AAAACCAGTTGCAGCCTCAACCCACATGGGGATGTAGAAAGCCGTAAAGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR TCA 90 bp GGATGCAGGCAGAGAATGACTTTAAGAAAAGATTCTATGATCCCTTCCTTTAGTCCGACAGCCGGCCGCTaGTGTTGGCCAGCGAGAGGG +
Preference number: 2 (lower is better)
Translates to: GCRQRMTLRKDSMIPSFSPTAGR*CWPARG
Trigger: CCCTCTCGCTGGCCAACATCAGCGGCCGGCTGTCGG...ACTAAAGGAAGGGATCATAGAATCTTTTCTTAAAGTCATTCTCTGCCTGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290075.10
3UTR-3UTR CCA 90 bp AACACTTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCCCTTGCACGGCAGCCTaGCAGAGCACCAAATGGCAC +
Preference number: 2 (lower is better)
Translates to: NTCSPLKHTLFVLQVGSSPCTAA*QSTKWH
Trigger: GTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGG...GCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR TCA 90 bp TTAACAAACACTTGTATCTGCTCAGTGCTTCACAACTTTCAAGGCTTTTCTCAACACACAGCCTTCCGGTaGGCGGCCGTGCCGTCCCCT +
Preference number: 2 (lower is better)
Translates to: LTNTCICSVLHNFQGFSQHTAFR*AAVPSP
Trigger: AGGGGACGGCACGGCCGCTCACCGGAAGGCTGTGTG...TTGAGAAAAGCCTTGAAAGTTGTGAAGCACTGAGCAGATACAAGTGTTTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR TCA 90 bp TTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCAGTACGCCTGTGTTCTCGGGTaGCGCAGAGCAGACAAGGAT +
Preference number: 2 (lower is better)
Translates to: LLTLETYIVRLAGRKQQYACVLG*RRADKD
Trigger: ATCCTTGTCTGCTCTGCGTCACCCGAGAACACAGGC...GTACTGCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR GCA 90 bp TTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCAGTACGCCTCCTCGGTAAGATaGACCACGCTGACCGTGATG +
Preference number: 2 (lower is better)
Translates to: LLTLETYIVRLAGRKQQYASSVR*TTLTVM
Trigger: CATCACGGTCAGCGTGGTGCATCTTACCGAGGAGGC...GTACTGCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR CCA 90 bp GTGGACTTTACGGCTTTCTACATCCCCATGTGGGTTGAGGCTGCAACTGGTTTTCCAGGGCCAGATCTCTaGTCCTGGAATTTTGGGGAA +
Preference number: 2 (lower is better)
Translates to: VDFTAFYIPMWVEAATGFPGPDL*SWNFGE
Trigger: TTCCCCAAAATTCCAGGACCAGAGATCTGGCCCTGG...AAAACCAGTTGCAGCCTCAACCCACATGGGGATGTAGAAAGCCGTAAAGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR GCA 90 bp ACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCATACTCCCAACTCCCAGCTATCCCTaGAAAACAAACTCCAGAAAA +
Preference number: 2 (lower is better)
Translates to: TTSAGFITASWSRVAILPTPSYP*KTNSRK
Trigger: TTTTCTGGAGTTTGTTTTGCAGGGATAGCTGGGAGT...TGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417331.6
3UTR-3UTR GCA 90 bp TGCTTCAGCGTGGCATATCTTAAGTGGACCAAAAGGGGTGGTAGGATAATTTTTGGAGAAGGCGTTAACTaGCAGATGGGACAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: CFSVAYLKWTKRGGRIIFGEGVN*QMGQGS
Trigger: GCTGCCCTGTCCCATCTGGCAGTTAACGCCTTCTCC...AAAAATTATCCTACCACCCCTTTTGGTCCACTTAAGATATGCCACGCTGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR TCA 90 bp TATGGAGCTCGATTTTCCAGCTGGCGCTTGGTGAGAAAGTACTTGAAGAACTCAAAACACCTCTGTCACTaGTTTCTCCCCAGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: YGARFSSWRLVRKYLKNSKHLCH*FLPRLQ
Trigger: CTGAAGCCTGGGGAGAAATCAGTGACAGAGGTGTTT...TGAGTTCTTCAAGTACTTTCTCACCAAGCGCCAGCTGGAAAATCGAGCTCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290075.10
3UTR-3UTR CCA 90 bp GTGGACTTTACGGCTTTCTACATCCCCATGTGGGTTGAGGCTGCAACTGGTTTTTGCATGGTCCCAAGATaGAAATTCTCCACGTGTTAC +
Preference number: 2 (lower is better)
Translates to: VDFTAFYIPMWVEAATGFCMVPR*KFSTCY
Trigger: GTAACACGTGGAGAATTTCCATCTTGGGACCATGCA...AAAACCAGTTGCAGCCTCAACCCACATGGGGATGTAGAAAGCCGTAAAGTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR GCA 90 bp TGCTTCAGCGTGGCATATCTTAAGTGGACCAAAAGGGGTGGTAGGATAATTTTTGGGCAAGGGGCTGGATaGAGGCAGAGAATGACTTTA +
Preference number: 2 (lower is better)
Translates to: CFSVAYLKWTKRGGRIIFGQGAG*RQRMTL
Trigger: TAAAGTCATTCTCTGCCTGCATCCAGCCCCTTGCCC...AAAAATTATCCTACCACCCCTTTTGGTCCACTTAAGATATGCCACGCTGAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR GCA 90 bp AACACTTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCCAAGTCGCCAAATGCTaGCTATCAAGGGCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: NTCSPLKHTLFVLQVGSSQVAKC*LSRASK
Trigger: CTTAGAAGCCCTTGATAGGCAGCATTTGGCGACTTG...GCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR GCA 90 bp TTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCAGTACTTTATCCCAAACACCTaGCCCACAAGTCGCCAAATG +
Preference number: 2 (lower is better)
Translates to: LLTLETYIVRLAGRKQQYFIPNT*PTSRQM
Trigger: CATTTGGCGACTTGTGGGGCAGGTGTTTGGGATAAA...GTACTGCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR GCA 90 bp CCATTTAACACGAACCCAAGGCAGGTTGAGAGCGGAGATGTAAACATTTTCAACCATGCTTCCCTAGACTaGACAGGGAAACACAGGAGA +
Preference number: 2 (lower is better)
Translates to: PFNTNPRQVESGDVNIFNHASLD*TGKHRR
Trigger: TCTCCTGTGTTTCCCTGTGCAGTCTAGGGAAGCATG...GTTGAAAATGTTTACATCTCCGCTCTCAACCTGCCTTGGGTTCGTGTTAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR GCA 90 bp TTAACACCATTTAACACGAACCCAAGGCAGGTTGAGAGCGGAGATGTAAACATTAAAAGAATCCAGGCCTaGGCCTCCTCGGTAAGATGC +
Preference number: 2 (lower is better)
Translates to: LTPFNTNPRQVESGDVNIKRIQA*ASSVRC
Trigger: GCATCTTACCGAGGAGGCGCAGGCCTGGATTCTTTT...AATGTTTACATCTCCGCTCTCAACCTGCCTTGGGTTCGTGTTAAATGGTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR GCA 90 bp TTAACAAACACTTGTATCTGCTCAGTGCTTCACAACTTTCAAGGCTTTTCTCAACCTGATGACCAGGCATaGAGGCTGGCCAAGTGGCTC +
Preference number: 2 (lower is better)
Translates to: LTNTCICSVLHNFQGFSQPDDQA*RLAKWL
Trigger: GAGCCACTTGGCCAGCCTGCATGCCTGGTCATCAGG...TTGAGAAAAGCCTTGAAAGTTGTGAAGCACTGAGCAGATACAAGTGTTTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR TCA 90 bp TTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCAGTACGCCGGCCACATTCACTaGTTTATTACTTTGTTGCCT +
Preference number: 2 (lower is better)
Translates to: LLTLETYIVRLAGRKQQYAGHIH*FITLLP
Trigger: AGGCAACAAAGTAATAAATCAGTGAATGTGGCCGGC...GTACTGCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR TCA 90 bp TTAACACCATTTAACACGAACCCAAGGCAGGTTGAGAGCGGAGATGTAAACATTCAGGACCCGGCTCACTaGAATGCAAACATACATGAG +
Preference number: 2 (lower is better)
Translates to: LTPFNTNPRQVESGDVNIQDPAH*NANIHE
Trigger: CTCATGTATGTTTGCATTTCAGTGAGCCGGGTCCTG...AATGTTTACATCTCCGCTCTCAACCTGCCTTGGGTTCGTGTTAAATGGTGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR TCA 90 bp CCCACACAAAAACACACAATTCTCCCCTTCTTCAAAGAGCTGGCAACAATTGAGCCTTTTTCGTTCACCTaGTGGAAGAATTCAACCCTC +
Preference number: 2 (lower is better)
Translates to: PTQKHTILPFFKELATIEPFSFT*WKNSTL
Trigger: GAGGGTTGAATTCTTCCATCAGGTGAACGAAAAAGG...CTCAATTGTTGCCAGCTCTTTGAAGAAGGGGAGAATTGTGTGTTTTTGTGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR GCA 90 bp AACACTTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCGGCCTCTTCCTATTTTaGACTTTGCATTGTCAAAGT +
Preference number: 2 (lower is better)
Translates to: NTCSPLKHTLFVLQVGSSGLFLF*TLHCQS
Trigger: ACTTTGACAATGCAAAGTGCAAAATAGGAAGAGGCC...GCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR GCA 90 bp AACACTTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCACAAACACTTGTATCTaGTCAGTGCTTCACAACTTT +
Preference number: 2 (lower is better)
Translates to: NTCSPLKHTLFVLQVGSSTNTCI*SVLHNF
Trigger: AAAGTTGTGAAGCACTGAGCAGATACAAGTGTTTGT...GCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR TCA 90 bp TTAACAAACACTTGTATCTGCTCAGTGCTTCACAACTTTCAAGGCTTTTCTCAATTCCCATCCCTGATCTaGAAAAGGAACTCCACTGAC +
Preference number: 2 (lower is better)
Translates to: LTNTCICSVLHNFQGFSQFPSLI*KRNSTD
Trigger: GTCAGTGGAGTTCCTTTTTCAGATCAGGGATGGGAA...TTGAGAAAAGCCTTGAAAGTTGTGAAGCACTGAGCAGATACAAGTGTTTGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR GCA 90 bp TTAACAAACACTTGTATCTGCTCAGTGCTTCACAACTTTCAAGGCTTTTCTCAAGTCTCAGCAGGTTTATaGCCAGTCACCCCAATTCTA +
Preference number: 2 (lower is better)
Translates to: LTNTCICSVLHNFQGFSQVSAGL*PVTPIL
Trigger: TAGAATTGGGGTGACTGGGCATAAACCTGCTGAGAC...TTGAGAAAAGCCTTGAAAGTTGTGAAGCACTGAGCAGATACAAGTGTTTGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR CCA 90 bp TTAACAAACACTTGTATCTGCTCAGTGCTTCACAACTTTCAAGGCTTTTCTCAAGTGGCATATCTTAAGTaGACCAAAAGGGGTGGTAGG +
Preference number: 2 (lower is better)
Translates to: LTNTCICSVLHNFQGFSQVAYLK*TKRGGR
Trigger: CCTACCACCCCTTTTGGTCCACTTAAGATATGCCAC...TTGAGAAAAGCCTTGAAAGTTGTGAAGCACTGAGCAGATACAAGTGTTTGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR CAA 90 bp AGCTGGCAACAATTGAGAGGCAGAAACAATAGTTACTACAGGCATTaGAGAAATTTAAGAAATAACACTTGCTCACCCTTGAAACATACA +
Preference number: 2 (lower is better)
Translates to: SWQQLRGRNNSYYRH*RNLRNNTCSPLKHT
Trigger: TGTATGTTTCAAGGGTGAGCAAGTGTTATTTCTTAAATTTCTCAAATGCCTGTAGTAACTATTGTTTCTGCCTCTCAATTGTTGCCAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR TCA 72 bp CGGCCGCGGCGAGGGCCCCGGCCAGCCCGCCTGAGATaGTGTGGGACTGCGGGTTGTAGGTCCGGTGGGGGT +
Preference number: 3 (lower is better)
Translates to: RPRRGPRPARLR*CGTAGCRSGGG
Trigger: ACCCCCACCGGACCTACAACCCGCAGTCCCACATCATCTCAGGCGGGCTGGCCGGGGCCCTCGCCGCGGCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
3UTR TCA 72 bp TCCGGAAGGCATTGGCCATACCCGACAGCCGGCCGCTaGTGTTGGCCAGCGAGAGGGCCACGTTCTCCTGAG +
Preference number: 3 (lower is better)
Translates to: SGRHWPYPTAGR*CWPARGPRSPE
Trigger: CTCAGGAGAACGTGGCCCTCTCGCTGGCCAACATCAGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
3UTR-3UTR CAA 90 bp AAGTCCTTCCTGTCCACCACCACCTCGGATGTCCCCGCACACAGCCTTCCGGTGACCGTCCGGAAGGCATaGGCCATACCCGACAGCCGG +
Preference number: 3 (lower is better)
Translates to: KSFLSTTTSDVPAHSLPVTVRKA*AIPDSR
Trigger: CCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGGT...CACCGGAAGGCTGTGTGCGGGGACATCCGAGGTGGTGGTGGACAGGAAGGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290075.10
3UTR TCA 72 bp GAATGGCTTCTGGAGAGGGGTCTTCCGACTCGGGCATaGGGGTCCAGGTCAGACCTCAGCCGCAGGGCCCTA +
Preference number: 3 (lower is better)
Translates to: EWLLERGLPTRA*GSRSDLSRRAL
Trigger: TAGGGCCCTGCGGCTGAGGTCTGACCTGGACCCTCATGCCCGAGTCGGAAGACCCCTCTCCAGAAGCCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR CCA 72 bp TTTATTCGTGAGCAAGCGGGCCGAAGTCGAGGCGGCTaGGTCACAGGGAGGAACACCCTGGGGAGGGACGTG +
Preference number: 3 (lower is better)
Translates to: FIREQAGRSRGG*VTGRNTLGRDV
Trigger: CACGTCCCTCCCCAGGGTGTTCCTCCCTGTGACCCAGCCGCCTCGACTTCGGCCCGCTTGCTCACGAATAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290075.10
3UTR GCA 72 bp CTACTGGGCTCCACCACCCTCCAGCGGGCGAGATCCTaGCACCCAGCATGTGTGCGTGTGTGTACACAGCAA +
Preference number: 3 (lower is better)
Translates to: LLGSTTLQRARS*HPACVRVCTQQ
Trigger: TTGCTGTGTACACACACGCACACATGCTGGGTGGCAGGATCTCGCCCGCTGGAGGGTGGTGGAGCCCAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR TCA 72 bp CTCGGTCCTCCACACCGTCCGGATGCAGCTGATTGCTaGCCGGTGCTGCGAGTTGTACATCTGCAAGCGCTG +
Preference number: 3 (lower is better)
Translates to: LGPPHRPDAADC*PVLRVVHLQAL
Trigger: CAGCGCTTGCAGATGTACAACTCGCAGCACCGGTCAGCAATCAGCTGCATCCGGACGGTGTGGAGGACCGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
3UTR TCA 72 bp CCAACCCCTCGGTCCTCCACACCGTCCGGATGCAGCTaGTTGCTGACCGGTGCTGCGAGTTGTACATCTGCA +
Preference number: 3 (lower is better)
Translates to: PTPRSSTPSGCS*LLTGAASCTSA
Trigger: TGCAGATGTACAACTCGCAGCACCGGTCAGCAATCAGCTGCATCCGGACGGTGTGGAGGACCGAGGGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
3UTR TCA 72 bp CCGCTGATGTTGGCCAGCGAGAGGGCCACGTTCTCCTaGGTGTTCAGAAGGGTCTTACAGACGTCCAGGGGG +
Preference number: 3 (lower is better)
Translates to: PLMLASERATFS*VFRRVLQTSRG
Trigger: CCCCCTGGACGTCTGTAAGACCCTTCTGAACACTCAGGAGAACGTGGCCCTCTCGCTGGCCAACATCAGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
3UTR GCA 72 bp CTCAAAAGAATCCAGGCCTGCGCCTCCTCGGTAAGATaGACCACGCTGACCGTGATGGGTGGCGGCAGGTCA +
Preference number: 3 (lower is better)
Translates to: LKRIQACASSVR*TTLTVMGGGRS
Trigger: TGACCTGCCGCCACCCATCACGGTCAGCGTGGTGCATCTTACCGAGGAGGCGCAGGCCTGGATTCTTTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR CCA 72 bp CTCCTCGGTAAGATGCACCACGCTGACCGTGATGGGTaGCGGCAGGTCAGGACCCGGCTCACTGAAATGCAA +
Preference number: 3 (lower is better)
Translates to: LLGKMHHADRDG*RQVRTRLTEMQ
Trigger: TTGCATTTCAGTGAGCCGGGTCCTGACCTGCCGCCACCCATCACGGTCAGCGTGGTGCATCTTACCGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR GCA 72 bp TCAGAGACAGTGCAGCTCGTCTCGTCGGTATTCCCTTaGACGGCAGCCTGGCAGAGCACCAAATGGCACAGC +
Preference number: 3 (lower is better)
Translates to: SETVQLVSSVFP*TAAWQSTKWHS
Trigger: GCTGTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGACGAGACGAGCTGCACTGTCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR GCA 72 bp AGACAAGCTCCGGTGAGGGCTCCAAATCAGAGACAGTaGAGCTCGTCTCGTCGGTATTCCCTTGCACGGCAG +
Preference number: 3 (lower is better)
Translates to: RQAPVRAPNQRQ*SSSRRYSLARQ
Trigger: CTGCCGTGCAAGGGAATACCGACGAGACGAGCTGCACTGTCTCTGATTTGGAGCCCTCACCGGAGCTTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR TCA 72 bp TTCAGAAAGCGAGGCTGCGAAGCCTGTGTTCTCGGGTaGCGCAGAGCAGACAAGGATGCAGAATGGCTTCTG +
Preference number: 3 (lower is better)
Translates to: FRKRGCEACVLG*RRADKDAEWLL
Trigger: CAGAAGCCATTCTGCATCCTTGTCTGCTCTGCGTCACCCGAGAACACAGGCTTCGCAGCCTCGCTTTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR GCA 72 bp GCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTaGCTTTCCTTTTTGACAGAGTCACTCTGTCGCCCA +
Preference number: 3 (lower is better)
Translates to: AIRAHRAPGSGF*LSFLTESLCRP
Trigger: TGGGCGACAGAGTGACTCTGTCAAAAAGGAAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR CCA 72 bp TGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTaGAGCAGGGTGGCCATACTCCCAGCTATCCCTGCA +
Preference number: 3 (lower is better)
Translates to: CFTTSAGFITAS*SRVAILPAIPA
Trigger: TGCAGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417331.6
3UTR-3UTR CAA 90 bp GACAGTGCAGCTCGTCTCGTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACTCTGGTCCTGGAATTTaGGGGAAAGACAAAGGAAAA +
Preference number: 3 (lower is better)
Translates to: DSAARLVGIPLHGSLAEHSGPGI*GKDKGK
Trigger: TTTTCCTTTGTCTTTCCCCAAAATTCCAGGACCAGA...GTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGACGAGACGAGCTGCACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR-3UTR CAA 90 bp GTGGACTTTACGGCTTTCTACATCCCCATGTGGGTTGAGGCTGCAACTGGTTTTCCTCTCTCTAAGGCATaGGGGAGCAGAGGGCCCATA +
Preference number: 3 (lower is better)
Translates to: VDFTAFYIPMWVEAATGFPLSKA*GSRGPI
Trigger: TATGGGCCCTCTGCTCCCCAATGCCTTAGAGAGAGG...AAAACCAGTTGCAGCCTCAACCCACATGGGGATGTAGAAAGCCGTAAAGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR GCA 72 bp GCGCGTGTGTGTGCGTGCGTGTGTCTGGGTGTGCATTaGACACACAACTCTGAGTTCTTTATTCGTGAGCAA +
Preference number: 3 (lower is better)
Translates to: ARVCACVCLGVH*THNSEFFIREQ
Trigger: TTGCTCACGAATAAAGAACTCAGAGTTGTGTGTGCAATGCACACCCAGACACACGCACGCACACACACGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290075.10
3UTR CCA 72 bp TGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTaGAGCAGGGTGGCCATACTCCCAGCTATCCCTTTT +
Preference number: 3 (lower is better)
Translates to: CFTTSAGFITAS*SRVAILPAIPF
Trigger: AAAAGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290075.10
3UTR CCA 72 bp CTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTaGCCATACTCCCAGCTATCCCTGCAAAACAAACTC +
Preference number: 3 (lower is better)
Translates to: LLLDSLPHRGAG*PYSQLSLQNKL
Trigger: GAGTTTGTTTTGCAGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417331.6
3UTR CCA 72 bp TCTACTCCCCAAGGCACTGTGTGCATGGTCCCAAGATaGAAATTCTCCACGTGTTACTTCCTAGGCAGTAGC +
Preference number: 3 (lower is better)
Translates to: STPQGTVCMVPR*KFSTCYFLGSS
Trigger: GCTACTGCCTAGGAAGTAACACGTGGAGAATTTCCATCTTGGGACCATGCACACAGTGCCTTGGGGAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR TCA 72 bp ATGAGCTTCCTGCTCATTTTTAAAGACAAGCTCCGGTaGGGGCTCCAAATCAGAGACAGTGCAGCTCGTCTC +
Preference number: 3 (lower is better)
Translates to: MSFLLIFKDKLR*GLQIRDSAARL
Trigger: GAGACGAGCTGCACTGTCTCTGATTTGGAGCCCTCACCGGAGCTTGTCTTTAAAAATGAGCAGGAAGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR CCA 72 bp CTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTaGCCATACTCCCAGCTATCCCTTTTAAAGCTTAGT +
Preference number: 3 (lower is better)
Translates to: LLLDSLPHRGAG*PYSQLSLLKLS
Trigger: ACTAAGCTTTAAAAGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290075.10
3UTR GCA 72 bp GCTATTAGGGCAAAATCTACTCCCCAAGGCACTGTGTaGATGGTCCCAAGATGGAAATTCTCCACGTGTTAC +
Preference number: 3 (lower is better)
Translates to: AIRAKSTPQGTV*MVPRWKFSTCY
Trigger: GTAACACGTGGAGAATTTCCATCTTGGGACCATGCACACAGTGCCTTGGGGAGTAGATTTTGCCCTAATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR CCA 72 bp TTAGGGCAAAATCTACTCCCCAAGGCACTGTGTGCATaGTCCCAAGATGGAAATTCTCCACGTGTTACTTCC +
Preference number: 3 (lower is better)
Translates to: LGQNLLPKALCA*SQDGNSPRVTS
Trigger: GGAAGTAACACGTGGAGAATTTCCATCTTGGGACCATGCACACAGTGCCTTGGGGAGTAGATTTTGCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR TCA 72 bp AGGTCAGGACCCGGCTCACTGAAATGCAAACATACATaGGCTTCCTGCTCATTTTTAAAGACAAGCTCCGGT +
Preference number: 3 (lower is better)
Translates to: RSGPGSLKCKHT*ASCSFLKTSSG
Trigger: ACCGGAGCTTGTCTTTAAAAATGAGCAGGAAGCTCATGTATGTTTGCATTTCAGTGAGCCGGGTCCTGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR TCA 72 bp ACTGGCTGCAGATGTCACTCCAAAGACACCAATGACTaGGTACGTGCAAAGGTTACACTGAATTGGTCACCA +
Preference number: 3 (lower is better)
Translates to: TGCRCHSKDTND*VRAKVTLNWSP
Trigger: TGGTGACCAATTCAGTGTAACCTTTGCACGTACTCAGTCATTGGTGTCTTTGGAGTGACATCTGCAGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR GCA 72 bp CAAGTGAAACTTCCATCTGGAGGGGCTAAACACAGCTaGCGGCCACATTCACTGATTTATTACTTTGTTGCC +
Preference number: 3 (lower is better)
Translates to: QVKLPSGGAKHS*RPHSLIYYFVA
Trigger: GGCAACAAAGTAATAAATCAGTGAATGTGGCCGGCAGCTGTGTTTAGCCCCTCCAGATGGAAGTTTCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR TCA 72 bp ACGTGGGAGGTACCCAGTTTGGCTCTTTCCCATCCCTaGTCTGAAAAAGGAACTCCACTGACTGATAAAATT +
Preference number: 3 (lower is better)
Translates to: TWEVPSLALSHP*SEKGTPLTDKI
Trigger: AATTTTATCAGTCAGTGGAGTTCCTTTTTCAGATCAGGGATGGGAAAGAGCCAAACTGGGTACCTCCCACGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR TCA 72 bp CTCCTAGAGAAATCAAGTTTATTTTCTAAACACCAGTaGAAGCAAAATCCAGTAGGAAATACCTTGCTTCAG +
Preference number: 3 (lower is better)
Translates to: LLEKSSLFSKHQ*KQNPVGNTLLQ
Trigger: CTGAAGCAAGGTATTTCCTACTGGATTTTGCTTTCACTGGTGTTTAGAAAATAAACTTGATTTCTCTAGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp GGGGTCGTGGCGGCCGCGGCGAGGGCCCCGGCCAGCCCGCCTGAGATGATGTGGGGCATGGGCCGGCCCTaGACCCATGATCATGACGTT +
Preference number: 4 (lower is better)
Translates to: GVVAAAARAPASPPEMMWGMGRP*THDHDV
Trigger: AACGTCATGATCATGGGTGCAGGGCCGGCCCATGCC...CCACATCATCTCAGGCGGGCTGGCCGGGGCCCTCGCCGCGGCCGCCACGACCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CCA 90 bp GCCCCCAACCCCTCGGTCCTCCACACCGTCCGGATGCAGCTGATTGCTGACCGGAGTCCTCCGACCCGGTaGCGTCCTTGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: APNPSVLHTVRMQLIADRSPPTR*RPCRRR
Trigger: GCGGCGGCGGCAAGGACGCCACCGGGTCGGAGGACT...CCGGTCAGCAATCAGCTGCATCCGGACGGTGTGGAGGACCGAGGGGTTGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CCA 90 bp GCTCCGGTAGAAGGCCCCCAACCCCTCGGTCCTCCACACCGTCCGGATGCAGCTAGTCCTCCGACCCGGTaGCGTCCTTGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: APVEGPQPLGPPHRPDAASPPTR*RPCRRR
Trigger: GCGGCGGCGGCAAGGACGCCACCGGGTCGGAGGACT...AGCTGCATCCGGACGGTGTGGAGGACCGAGGGGTTGGGGGCCTTCTACCGGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR TCA 90 bp GCGTGGTGTAGCTCCGGTAGAAGGCCCCCAACCCCTCGGTCCTCCACACCGTCCCACACAGCCTTCCGGTaGGCGGCCGTGCCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: AWCSSGRRPPTPRSSTPSHTAFR*AAVPSP
Trigger: AGGGGACGGCACGGCCGCTCACCGGAAGGCTGTGTG...GGACGGTGTGGAGGACCGAGGGGTTGGGGGCCTTCTACCGGAGCTACACCACGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR GCA 90 bp CGGAAGGCATTGGCCATACCCGACAGCCGGCCGCTGATGTTGGCCAGCGAGAGGACCCGGTGGCGTCCTTaGCGCCGCCGCCATCTCGGC +
Preference number: 4 (lower is better)
Translates to: RKALAIPDSRPLMLASERTRWRP*RRRHLG
Trigger: GCCGAGATGGCGGCGGCGGCAAGGACGCCACCGGGT...CCTCTCGCTGGCCAACATCAGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CCA 90 bp ACCCGACAGCCGGCCGCTGATGTTGGCCAGCGAGAGGGCCACGTTCTCCTGAGTAGTCCTCCGACCCGGTaGCGTCCTTGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: TRQPAADVGQREGHVLLSSPPTR*RPCRRR
Trigger: GCGGCGGCGGCAAGGACGCCACCGGGTCGGAGGACT...ACTCAGGAGAACGTGGCCCTCTCGCTGGCCAACATCAGCGGCCGGCTGTCGGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR TCA 90 bp GCGGGCCGAAGTCGAGGCGGCTGGGTCACAGGGAGGAACACCCTGGGGAGGGACCCAGCCCGCCTGAGATaGTGTGGGACTGCGGGTTGT +
Preference number: 4 (lower is better)
Translates to: AGRSRGGWVTGRNTLGRDPARLR*CGTAGC
Trigger: ACAACCCGCAGTCCCACATCATCTCAGGCGGGCTGG...GTCCCTCCCCAGGGTGTTCCTCCCTGTGACCCAGCCGCCTCGACTTCGGCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR GCA 90 bp CCCTCGGTCCTCCACACCGTCCGGATGCAGCTGATTGCTGACCGGTGCTGCGAGTGCCCACGCTCCCGCTaGGCAGCTCCATCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: PSVLHTVRMQLIADRCCECPRSR*AAPSAS
Trigger: GCTGGCGGATGGAGCTGCGCAGCGGGAGCGTGGGCA...CTCGCAGCACCGGTCAGCAATCAGCTGCATCCGGACGGTGTGGAGGACCGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR TCA 90 bp GCGGGCCGAAGTCGAGGCGGCTGGGTCACAGGGAGGAACACCCTGGGGAGGGACAGTCCACCGGGTACATaGCCGAGTGCTCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: AGRSRGGWVTGRNTLGRDSPPGT*PSAPGS
Trigger: GGATCCTGGAGCACTCGGTCATGTACCCGGTGGACT...GTCCCTCCCCAGGGTGTTCCTCCCTGTGACCCAGCCGCCTCGACTTCGGCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR CCA 90 bp GGGGTCGTGGCGGCCGCGGCGAGGGCCCCGGCCAGCCCGCCTGAGATGATGTGGCTGGGCTTTGGGATCTaGACTCAAACTCTGCATTCG +
Preference number: 4 (lower is better)
Translates to: GVVAAAARAPASPPEMMWLGFGI*TQTLHS
Trigger: CGAATGCAGAGTTTGAGTCCAGATCCCAAAGCCCAG...CCACATCATCTCAGGCGGGCTGGCCGGGGCCCTCGCCGCGGCCGCCACGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CCA 90 bp GCCATACCCGACAGCCGGCCGCTGATGTTGGCCAGCGAGAGGGCCACGTTCTCCCCGTCCGGAAGGCATTaGCCATACCCGACAGCCGGC +
Preference number: 4 (lower is better)
Translates to: AIPDSRPLMLASERATFSPSGRH*PYPTAG
Trigger: GCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGG...GGAGAACGTGGCCCTCTCGCTGGCCAACATCAGCGGCCGGCTGTCGGGTATGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CCA 90 bp GGGGTCGTGGCGGCCGCGGCGAGGGCCCCGGCCAGCCCGCCTGAGATGATGTGGGCTCGATTTTCCAGCTaGCGCTTGGTGAGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: GVVAAAARAPASPPEMMWARFSS*RLVRKY
Trigger: GTACTTTCTCACCAAGCGCCAGCTGGAAAATCGAGC...CCACATCATCTCAGGCGGGCTGGCCGGGGCCCTCGCCGCGGCCGCCACGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR TCA 90 bp TGTAGCTCCGGTAGAAGGCCCCCAACCCCTCGGTCCTCCACACCGTCCGGATGCCCGTCCGGATGCAGCTaGTTGCTGACCGGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: CSSGRRPPTPRSSTPSGCPSGCS*LLTGAA
Trigger: CGCAGCACCGGTCAGCAATCAGCTGCATCCGGACGG...GCATCCGGACGGTGTGGAGGACCGAGGGGTTGGGGGCCTTCTACCGGAGCTACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR TCA 90 bp GGGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTCCCGGCCAGCCCGCCTaGGATGATGTGGGACTGCGG +
Preference number: 4 (lower is better)
Translates to: GRGLQSGPTELQGPVFAFPGQPA*DDVGLR
Trigger: CCGCAGTCCCACATCATCTCAGGCGGGCTGGCCGGG...AAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp CCGGCCGCTGATGTTGGCCAGCGAGAGGGCCACGTTCTCCTGAGTGTTCAGAAGCCCGGCCAGCCCGCCTaGGATGATGTGGGACTGCGG +
Preference number: 4 (lower is better)
Translates to: PAADVGQREGHVLLSVQKPGQPA*DDVGLR
Trigger: CCGCAGTCCCACATCATCTCAGGCGGGCTGGCCGGG...CTTCTGAACACTCAGGAGAACGTGGCCCTCTCGCTGGCCAACATCAGCGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR TCA 90 bp AAGTCCTTCCTGTCCACCACCACCTCGGATGTCCCCGCACACAGCCTTCCGGTGCCGACAGCCGGCCGCTaGTGTTGGCCAGCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: KSFLSTTTSDVPAHSLPVPTAGR*CWPARG
Trigger: CCCTCTCGCTGGCCAACATCAGCGGCCGGCTGTCGG...CACCGGAAGGCTGTGTGCGGGGACATCCGAGGTGGTGGTGGACAGGAAGGACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000519973.6
CDS-3UTR TCA 90 bp CCGGCCGCTGATGTTGGCCAGCGAGAGGGCCACGTTCTCCTGAGTGTTCAGAAGCCGACAGCCGGCCGCTaGTGTTGGCCAGCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PAADVGQREGHVLLSVQKPTAGR*CWPARG
Trigger: CCCTCTCGCTGGCCAACATCAGCGGCCGGCTGTCGG...CTTCTGAACACTCAGGAGAACGTGGCCCTCTCGCTGGCCAACATCAGCGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR TCA 90 bp GCCAGGCCGTTGAGCTGGTACACCGTCCGGAAGGCATTGGCCATACCCGACAGCAGCCGGCCAGGCCGTTaGGCTGGTACACCGTCCGGA +
Preference number: 4 (lower is better)
Translates to: ARPLSWYTVRKALAIPDSSRPGR*AGTPSG
Trigger: TCCGGACGGTGTACCAGCTCAACGGCCTGGCCGGCT...GCTGTCGGGTATGGCCAATGCCTTCCGGACGGTGTACCAGCTCAACGGCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR TCA 90 bp GGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTCCACACAGCCTTCCGGTaGGCGGCCGTGCCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: GGACNQGPQSSRVRFLPFHTAFR*AAVPSP
Trigger: AGGGGACGGCACGGCCGCTCACCGGAAGGCTGTGTG...GAAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp GTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACCAAATGGCACAGCTAGGGAGTCCTCCGACCCGGTaGCGTCCTTGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VGIPLHGSLAEHQMAQLGSPPTR*RPCRRR
Trigger: GCGGCGGCGGCAAGGACGCCACCGGGTCGGAGGACT...CCCTAGCTGTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp GCGTGGTGTAGCTCCGGTAGAAGGCCCCCAACCCCTCGGTCCTCCACACCGTCCGCCAGGCCGTTGAGCTaGTACACCGTCCGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: AWCSSGRRPPTPRSSTPSARPLS*YTVRKA
Trigger: TGCCTTCCGGACGGTGTACCAGCTCAACGGCCTGGC...GGACGGTGTGGAGGACCGAGGGGTTGGGGGCCTTCTACCGGAGCTACACCACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290075.10
3UTR CAA 72 bp GCCAGGCCGTTGAGCTGGTACACCGTCCGGAAGGCATaGGCCATACCCGACAGCCGGCCGCTGATGTTGGCC +
Preference number: 4 (lower is better)
Translates to: ARPLSWYTVRKA*AIPDSRPLMLA
Trigger: GGCCAACATCAGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGGTGTACCAGCTCAACGGCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR GCA 90 bp TGGTGTAGCTCCGGTAGAAGGCCCCCAACCCCTCGGTCCTCCACACCGTCCGGACCCGGCCATCGCTCCTaGTGTCATGTGGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: WCSSGRRPPTPRSSTPSGPGHRS*CHVGGH
Trigger: GTGTCCACCCACATGACAGCAGGAGCGATGGCCGGG...TCCGGACGGTGTGGAGGACCGAGGGGTTGGGGGCCTTCTACCGGAGCTACACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR GCA 90 bp CTGCGCCTCCTCGGTAAGATGCACCACGCTGACCGTGATGGGTGGCGGCAGGTCACACAGGGAGGGGCCTaGAATCAGGGCCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: LRLLGKMHHADRDGWRQVTQGGA*NQGPQS
Trigger: GCTCTGTGGGCCCTGATTGCAGGCCCCTCCCTGTGT...GACCTGCCGCCACCCATCACGGTCAGCGTGGTGCATCTTACCGAGGAGGCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp GCGTGGTGTAGCTCCGGTAGAAGGCCCCCAACCCCTCGGTCCTCCACACCGTCCGCTCCTGCTGTCATGTaGGTGGACACGGAGGCGCTA +
Preference number: 4 (lower is better)
Translates to: AWCSSGRRPPTPRSSTPSAPAVM*VDTEAL
Trigger: TAGCGCCTCCGTGTCCACCCACATGACAGCAGGAGC...GGACGGTGTGGAGGACCGAGGGGTTGGGGGCCTTCTACCGGAGCTACACCACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CCA 90 bp GGGGTCGTGGCGGCCGCGGCGAGGGCCCCGGCCAGCCCGCCTGAGATGATGTGGAGGTGGCTGTTTCCTTaGTGGTGGAAAACGTCATTT +
Preference number: 4 (lower is better)
Translates to: GVVAAAARAPASPPEMMWRWLFP*WWKTSF
Trigger: AAATGACGTTTTCCACCACCAAGGAAACAGCCACCT...CCACATCATCTCAGGCGGGCTGGCCGGGGCCCTCGCCGCGGCCGCCACGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CCA 90 bp CGAAGTCGAGGCGGCTGGGTCACAGGGAGGAACACCCTGGGGAGGGACGTGTTGCGAAGTCGAGGCGGCTaGGTCACAGGGAGGAACACC +
Preference number: 4 (lower is better)
Translates to: RSRGGWVTGRNTLGRDVLRSRGG*VTGRNT
Trigger: GGTGTTCCTCCCTGTGACCCAGCCGCCTCGACTTCG...CAACACGTCCCTCCCCAGGGTGTTCCTCCCTGTGACCCAGCCGCCTCGACTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR TCA 90 bp CGGAAGGCATTGGCCATACCCGACAGCCGGCCGCTGATGTTGGCCAGCGAGAGGAGTCCACCGGGTACATaGCCGAGTGCTCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: RKALAIPDSRPLMLASERSPPGT*PSAPGS
Trigger: GGATCCTGGAGCACTCGGTCATGTACCCGGTGGACT...CCTCTCGCTGGCCAACATCAGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR TCA 90 bp TACACCGTCCGGAAGGCATTGGCCATACCCGACAGCCGGCCGCTGATGTTGGCCAGGTCCGGTGGGGGTTaGCCTGCTCCTGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: YTVRKALAIPDSRPLMLARSGGG*PAPAGT
Trigger: AGTTCCTGCAGGAGCAGGTCAACCCCCACCGGACCT...GGCCAACATCAGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGGTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR TCA 90 bp GCGAGAGGGCCACGTTCTCCTGAGTGTTCAGAAGGGTCTTACAGACGTCCAGGGCCCGGCCAGCCCGCCTaGGATGATGTGGGACTGCGG +
Preference number: 4 (lower is better)
Translates to: ARGPRSPECSEGSYRRPGPGQPA*DDVGLR
Trigger: CCGCAGTCCCACATCATCTCAGGCGGGCTGGCCGGG...CCCTGGACGTCTGTAAGACCCTTCTGAACACTCAGGAGAACGTGGCCCTCTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR GCA 90 bp GAGCTGGTACACCGTCCGGAAGGCATTGGCCATACCCGACAGCCGGCCGCTGATCCCGGCCATCGCTCCTaGTGTCATGTGGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: ELVHRPEGIGHTRQPAADPGHRS*CHVGGH
Trigger: GTGTCCACCCACATGACAGCAGGAGCGATGGCCGGG...ATCAGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGGTGTACCAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR GCA 90 bp GCGGGCCGAAGTCGAGGCGGCTGGGTCACAGGGAGGAACACCCTGGGGAGGGACGCGTGTGTCTGGGTGTaGATTGCACACACAACTCTG +
Preference number: 4 (lower is better)
Translates to: AGRSRGGWVTGRNTLGRDACVWV*IAHTTL
Trigger: CAGAGTTGTGTGTGCAATGCACACCCAGACACACGC...GTCCCTCCCCAGGGTGTTCCTCCCTGTGACCCAGCCGCCTCGACTTCGGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR CCA 90 bp GCCATACCCGACAGCCGGCCGCTGATGTTGGCCAGCGAGAGGGCCACGTTCTCCCATCGTGGAGCAGGGTaGCCATACTCCCAGCTATCC +
Preference number: 4 (lower is better)
Translates to: AIPDSRPLMLASERATFSHRGAG*PYSQLS
Trigger: GGATAGCTGGGAGTATGGCCACCCTGCTCCACGATG...GGAGAACGTGGCCCTCTCGCTGGCCAACATCAGCGGCCGGCTGTCGGGTATGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR TCA 90 bp GATGTGGGACTGCGGGTTGTAGGTCCGGTGGGGGTTGACCTGCTCCTGCAGGAAAGGTCCGGTGGGGGTTaGCCTGCTCCTGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: DVGLRVVGPVGVDLLLQERSGGG*PAPAGT
Trigger: AGTTCCTGCAGGAGCAGGTCAACCCCCACCGGACCT...TTCCTGCAGGAGCAGGTCAACCCCCACCGGACCTACAACCCGCAGTCCCACATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR TCA 90 bp GTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACCAAATGGCACAGCTAGGGGCGCCTGGATGCCTTTaGAGTAGCCGGCCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: VGIPLHGSLAEHQMAQLGAPGCL*SSRPGR
Trigger: ACGGCCTGGCCGGCTACTTCAAAGGCATCCAGGCGC...CCCTAGCTGTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp TGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCATACTCCCAGCTATCCCTGCCCACGCTCCCGCTaGGCAGCTCCATCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: CWIHYRIVEQGGHTPSYPCPRSR*AAPSAS
Trigger: GCTGGCGGATGGAGCTGCGCAGCGGGAGCGTGGGCA...GGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR GCA 90 bp ACCGCATCGTGGAGCAGGGTGGCCATACTCCCAGCTATCCCTGCAAAACAAACTACCCGGTGGCGTCCTTaGCGCCGCCGCCATCTCGGC +
Preference number: 4 (lower is better)
Translates to: TASWSRVAILPAIPAKQTTRWRP*RRRHLG
Trigger: GCCGAGATGGCGGCGGCGGCAAGGACGCCACCGGGT...AGTTTGTTTTGCAGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417331.6
CDS-3UTR TCA 90 bp TCCGACTCGGGCATGAGGGTCCAGGTCAGACCTCAGCCGCAGGGCCCTAGCAGAAGTGGCTCCCCAAGCTaGCTCATCCCTCATCACACA +
Preference number: 4 (lower is better)
Translates to: SDSGMRVQVRPQPQGPSRSGSPS*LIPHHT
Trigger: TGTGTGATGAGGGATGAGTCAGCTTGGGGAGCCACT...TCTGCTAGGGCCCTGCGGCTGAGGTCTGACCTGGACCCTCATGCCCGAGTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp GCGCTGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCTCCGGTGAGCGGCCGTaGCGTCCCCTCCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: ALLHHFCWIHYRIVEQGGSGERP*RPLLSL
Trigger: TAGAGAGAGGAGGGGACGGCACGGCCGCTCACCGGA...GCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR CCA 90 bp AACCCCTCGGTCCTCCACACCGTCCGGATGCAGCTGATTGCTGACCGGTGCTGCCATCGTGGAGCAGGGTaGCCATACTCCCAGCTATCC +
Preference number: 4 (lower is better)
Translates to: NPSVLHTVRMQLIADRCCHRGAG*PYSQLS
Trigger: GGATAGCTGGGAGTATGGCCACCCTGCTCCACGATG...GCAGCACCGGTCAGCAATCAGCTGCATCCGGACGGTGTGGAGGACCGAGGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CCA 90 bp GCCCCCAACCCCTCGGTCCTCCACACCGTCCGGATGCAGCTGATTGCTGACCGGTTCATTACCGCATCGTaGAGCAGGGTGGCCATACTC +
Preference number: 4 (lower is better)
Translates to: APNPSVLHTVRMQLIADRFITAS*SRVAIL
Trigger: GAGTATGGCCACCCTGCTCCACGATGCGGTAATGAA...CCGGTCAGCAATCAGCTGCATCCGGACGGTGTGGAGGACCGAGGGGTTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CCA 90 bp TCCGACTCGGGCATGAGGGTCCAGGTCAGACCTCAGCCGCAGGGCCCTAGCAGAGGAAGGGGATGTTCATaGTCAGCTGCGTGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: SDSGMRVQVRPQPQGPSRGRGCS*SAAWCS
Trigger: GCTACACCACGCAGCTGACCATGAACATCCCCTTCC...TCTGCTAGGGCCCTGCGGCTGAGGTCTGACCTGGACCCTCATGCCCGAGTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp CATCTGGTAGATGACACGCGCCTGGATGCCTTTGAAGTAGCCGGCCAGGCCGTTCCGTCCGGAAGGCATTaGCCATACCCGACAGCCGGC +
Preference number: 4 (lower is better)
Translates to: HLVDDTRLDAFEVAGQAVPSGRH*PYPTAG
Trigger: GCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGG...AACGGCCTGGCCGGCTACTTCAAAGGCATCCAGGCGCGTGTCATCTACCAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR TCA 90 bp AACCCCTCGGTCCTCCACACCGTCCGGATGCAGCTGATTGCTGACCGGTGCTGCGATGCAGCTGATTGCTaGCCGGTGCTGCGAGTTGTA +
Preference number: 4 (lower is better)
Translates to: NPSVLHTVRMQLIADRCCDAADC*PVLRVV
Trigger: TACAACTCGCAGCACCGGTCAGCAATCAGCTGCATC...GCAGCACCGGTCAGCAATCAGCTGCATCCGGACGGTGTGGAGGACCGAGGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR TCA 90 bp CAAGCTCCGGTGAGGGCTCCAAATCAGAGACAGTGCAGCTCGTCTCGTCGGTATCCGTCCGGATGCAGCTaGTTGCTGACCGGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: QAPVRAPNQRQCSSSRRYPSGCS*LLTGAA
Trigger: CGCAGCACCGGTCAGCAATCAGCTGCATCCGGACGG...ATACCGACGAGACGAGCTGCACTGTCTCTGATTTGGAGCCCTCACCGGAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp CGGCACACACCATTTCAGAAAGCGAGGCTGCGAAGCCTGTGTTCTCGGGTGACGAGGTCCGGTGGGGGTTaGCCTGCTCCTGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: RHTPFQKARLRSLCSRVTRSGGG*PAPAGT
Trigger: AGTTCCTGCAGGAGCAGGTCAACCCCCACCGGACCT...CGTCACCCGAGAACACAGGCTTCGCAGCCTCGCTTTCTGAAATGGTGTGTGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp TCTTCCGACTCGGGCATGAGGGTCCAGGTCAGACCTCAGCCGCAGGGCCCTAGCAAAATGATCTACGTGTaGGGAGAGGGCAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSDSGMRVQVRPQPQGPSKMIYV*GEGKGL
Trigger: CAGCCCCTTGCCCTCTCCTCACACGTAGATCATTTT...GCTAGGGCCCTGCGGCTGAGGTCTGACCTGGACCCTCATGCCCGAGTCGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp AAGTCCTTCCTGTCCACCACCACCTCGGATGTCCCCGCACACAGCCTTCCGGTGGCCTGTGTTCTCGGGTaGCGCAGAGCAGACAAGGAT +
Preference number: 4 (lower is better)
Translates to: KSFLSTTTSDVPAHSLPVACVLG*RRADKD
Trigger: ATCCTTGTCTGCTCTGCGTCACCCGAGAACACAGGC...CACCGGAAGGCTGTGTGCGGGGACATCCGAGGTGGTGGTGGACAGGAAGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp AGCGGGCCGAAGTCGAGGCGGCTGGGTCACAGGGAGGAACACCCTGGGGAGGGATCTGGACTCAAACTCTaGATTCGTGTCTTCACCGAG +
Preference number: 4 (lower is better)
Translates to: SGPKSRRLGHREEHPGEGSGLKL*IRVFTE
Trigger: CTCGGTGAAGACACGAATGCAGAGTTTGAGTCCAGA...TCCCTCCCCAGGGTGTTCCTCCCTGTGACCCAGCCGCCTCGACTTCGGCCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR GCA 90 bp GTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACCAAATGGCACAGCTAGGGGGCATGGGCCGGCCCTaGACCCATGATCATGACGTT +
Preference number: 4 (lower is better)
Translates to: VGIPLHGSLAEHQMAQLGGMGRP*THDHDV
Trigger: AACGTCATGATCATGGGTGCAGGGCCGGCCCATGCC...CCCTAGCTGTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp GCCATACCCGACAGCCGGCCGCTGATGTTGGCCAGCGAGAGGGCCACGTTCTCCTGCGAGTTGTACATCTaGAAGCGCTGCTTCACCACT +
Preference number: 4 (lower is better)
Translates to: AIPDSRPLMLASERATFSCELYI*KRCFTT
Trigger: AGTGGTGAAGCAGCGCTTGCAGATGTACAACTCGCA...GGAGAACGTGGCCCTCTCGCTGGCCAACATCAGCGGCCGGCTGTCGGGTATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR GCA 90 bp CAAGCTCCGGTGAGGGCTCCAAATCAGAGACAGTGCAGCTCGTCTCGTCGGTATTCCGGTGAGCGGCCGTaGCGTCCCCTCCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: QAPVRAPNQRQCSSSRRYSGERP*RPLLSL
Trigger: TAGAGAGAGGAGGGGACGGCACGGCCGCTCACCGGA...ATACCGACGAGACGAGCTGCACTGTCTCTGATTTGGAGCCCTCACCGGAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp GGGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTGCCTCCTCGGTAAGATaGACCACGCTGACCGTGATG +
Preference number: 4 (lower is better)
Translates to: GRGLQSGPTELQGPVFAFASSVR*TTLTVM
Trigger: CATCACGGTCAGCGTGGTGCATCTTACCGAGGAGGC...AAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp GTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACCAAATGGCACAGCTAGGGCCTGATGACCAGGCATaGAGGCTGGCCAAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VGIPLHGSLAEHQMAQLGPDDQA*RLAKWL
Trigger: GAGCCACTTGGCCAGCCTGCATGCCTGGTCATCAGG...CCCTAGCTGTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp TGTAGCTCCGGTAGAAGGCCCCCAACCCCTCGGTCCTCCACACCGTCCGGATGCATACCGTTGGCTAGGTaGCTGTTTCCTTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CSSGRRPPTPRSSTPSGCIPLAR*LFPWWW
Trigger: CCACCACCAAGGAAACAGCCACCTAGCCAACGGTAT...GCATCCGGACGGTGTGGAGGACCGAGGGGTTGGGGGCCTTCTACCGGAGCTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR CCA 90 bp GAGCTGGTACACCGTCCGGAAGGCATTGGCCATACCCGACAGCCGGCCGCTGATGTGCGTGCGTGTGTCTaGGTGTGCATTGCACACACA +
Preference number: 4 (lower is better)
Translates to: ELVHRPEGIGHTRQPAADVRACV*VCIAHT
Trigger: TGTGTGTGCAATGCACACCCAGACACACGCACGCAC...ATCAGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGGTGTACCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR CCA 90 bp TCCGACTCGGGCATGAGGGTCCAGGTCAGACCTCAGCCGCAGGGCCCTAGCAGATTCATTACCGCATCGTaGAGCAGGGTGGCCATACTC +
Preference number: 4 (lower is better)
Translates to: SDSGMRVQVRPQPQGPSRFITAS*SRVAIL
Trigger: GAGTATGGCCACCCTGCTCCACGATGCGGTAATGAA...TCTGCTAGGGCCCTGCGGCTGAGGTCTGACCTGGACCCTCATGCCCGAGTCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp CGGCACACACCATTTCAGAAAGCGAGGCTGCGAAGCCTGTGTTCTCGGGTGACGGCCAGGCCGTTGAGCTaGTACACCGTCCGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RHTPFQKARLRSLCSRVTARPLS*YTVRKA
Trigger: TGCCTTCCGGACGGTGTACCAGCTCAACGGCCTGGC...CGTCACCCGAGAACACAGGCTTCGCAGCCTCGCTTTCTGAAATGGTGTGTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp ACCCGACAGCCGGCCGCTGATGTTGGCCAGCGAGAGGGCCACGTTCTCCTGAGTTCCCAGCTATCCCGTTaGCTAGGTGGCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: TRQPAADVGQREGHVLLSSQLSR*LGGCFL
Trigger: AAGGAAACAGCCACCTAGCCAACGGGATAGCTGGGA...ACTCAGGAGAACGTGGCCCTCTCGCTGGCCAACATCAGCGGCCGGCTGTCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523930.1
CDS-3UTR CCA 90 bp GGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTCTCACCCCAATTCTACTaGGCTCCACCACCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GGACNQGPQSSRVRFLPFSPQFY*APPPSS
Trigger: GCTGGAGGGTGGTGGAGCCCAGTAGAATTGGGGTGA...GAAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp AAGTCCTTCCTGTCCACCACCACCTCGGATGTCCCCGCACACAGCCTTCCGGTGAATTGGTCACCAGGGTaGGATAGTGGGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KSFLSTTTSDVPAHSLPVNWSPG*DSGVGR
Trigger: CCTCCCCACCCCACTATCCCACCCTGGTGACCAATT...CACCGGAAGGCTGTGTGCGGGGACATCCGAGGTGGTGGTGGACAGGAAGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp GGGCTCCAAATCAGAGACAGTGCAGCTCGTCTCGTCGGTATTCCCTTGCACGGCAGTCCACCGGGTACATaGCCGAGTGCTCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: GLQIRDSAARLVGIPLHGSPPGT*PSAPGS
Trigger: GGATCCTGGAGCACTCGGTCATGTACCCGGTGGACT...GCCGTGCAAGGGAATACCGACGAGACGAGCTGCACTGTCTCTGATTTGGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp CGAAGTCGAGGCGGCTGGGTCACAGGGAGGAACACCCTGGGGAGGGACGTGTTGAAACACCTCTGTCACTaGTTTCTCCCCAGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: RSRGGWVTGRNTLGRDVLKHLCH*FLPRLQ
Trigger: CTGAAGCCTGGGGAGAAATCAGTGACAGAGGTGTTT...CAACACGTCCCTCCCCAGGGTGTTCCTCCCTGTGACCCAGCCGCCTCGACTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR TCA 90 bp GCCAGGCCGTTGAGCTGGTACACCGTCCGGAAGGCATTGGCCATACCCGACAGCAGGGCCACGTTCTCCTaGGTGTTCAGAAGGGTCTTA +
Preference number: 4 (lower is better)
Translates to: ARPLSWYTVRKALAIPDSRATFS*VFRRVL
Trigger: TAAGACCCTTCTGAACACTCAGGAGAACGTGGCCCT...GCTGTCGGGTATGGCCAATGCCTTCCGGACGGTGTACCAGCTCAACGGCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR TCA 90 bp ACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCATACTCCCAGCGCCTGGATGCCTTTaGAGTAGCCGGCCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: TTSAGFITASWSRVAILPAPGCL*SSRPGR
Trigger: ACGGCCTGGCCGGCTACTTCAAAGGCATCCAGGCGC...TGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR GCA 90 bp ACCGTCCGGATGCAGCTGATTGCTGACCGGTGCTGCGAGTTGTACATCTGCAAGCCCGGCCATCGCTCCTaGTGTCATGTGGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: TVRMQLIADRCCELYICKPGHRS*CHVGGH
Trigger: GTGTCCACCCACATGACAGCAGGAGCGATGGCCGGG...CTTGCAGATGTACAACTCGCAGCACCGGTCAGCAATCAGCTGCATCCGGACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR GCA 90 bp GCCCCCAACCCCTCGGTCCTCCACACCGTCCGGATGCAGCTGATTGCTGACCGGCTGCTTCACCACTTCTaGTGGATTCATTACCGCATC +
Preference number: 4 (lower is better)
Translates to: APNPSVLHTVRMQLIADRLLHHF*WIHYRI
Trigger: GATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCAG...CCGGTCAGCAATCAGCTGCATCCGGACGGTGTGGAGGACCGAGGGGTTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR GCA 90 bp TCCGACTCGGGCATGAGGGTCCAGGTCAGACCTCAGCCGCAGGGCCCTAGCAGATGCGAGTTGTACATCTaGAAGCGCTGCTTCACCACT +
Preference number: 4 (lower is better)
Translates to: SDSGMRVQVRPQPQGPSRCELYI*KRCFTT
Trigger: AGTGGTGAAGCAGCGCTTGCAGATGTACAACTCGCA...TCTGCTAGGGCCCTGCGGCTGAGGTCTGACCTGGACCCTCATGCCCGAGTCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp CGGAAGGCATTGGCCATACCCGACAGCCGGCCGCTGATGTTGGCCAGCGAGAGGATTGCTGACCGGTGCTaGGAGTTGTACATCTGCAAG +
Preference number: 4 (lower is better)
Translates to: RKALAIPDSRPLMLASERIADRC*ELYICK
Trigger: CTTGCAGATGTACAACTCGCAGCACCGGTCAGCAAT...CCTCTCGCTGGCCAACATCAGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR GCA 90 bp GTTGAGCTGGTACACCGTCCGGAAGGCATTGGCCATACCCGACAGCCGGCCGCTCTGATTGCTGACCGGTaGTGCGAGTTGTACATCTGC +
Preference number: 4 (lower is better)
Translates to: VELVHRPEGIGHTRQPAALIADR*CELYIC
Trigger: GCAGATGTACAACTCGCAGCACCGGTCAGCAATCAG...AGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGGTGTACCAGCTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR GCA 90 bp AAGTCCTTCCTGTCCACCACCACCTCGGATGTCCCCGCACACAGCCTTCCGGTGTTCAGAAAGCGAGGCTaGGAAGCCTGTGTTCTCGGG +
Preference number: 4 (lower is better)
Translates to: KSFLSTTTSDVPAHSLPVFRKRG*EACVLG
Trigger: CCCGAGAACACAGGCTTCGCAGCCTCGCTTTCTGAA...CACCGGAAGGCTGTGTGCGGGGACATCCGAGGTGGTGGTGGACAGGAAGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp CTGCGCCTCCTCGGTAAGATGCACCACGCTGACCGTGATGGGTGGCGGCAGGTCAACCGGACTGCAGTCTaGGTGGAGCAACAATACCAA +
Preference number: 4 (lower is better)
Translates to: LRLLGKMHHADRDGWRQVNRTAV*VEQQYQ
Trigger: TTGGTATTGTTGCTCCACGCAGACTGCAGTCCGGTT...GACCTGCCGCCACCCATCACGGTCAGCGTGGTGCATCTTACCGAGGAGGCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp GCCTTTGAAGTAGCCGGCCAGGCCGTTGAGCTGGTACACCGTCCGGAAGGCATTGCAAAATACATGGCATaGGCCGGCCCTGCACCCATG +
Preference number: 4 (lower is better)
Translates to: AFEVAGQAVELVHRPEGIAKYMA*AGPAPM
Trigger: CATGGGTGCAGGGCCGGCCCATGCCATGTATTTTGC...AATGCCTTCCGGACGGTGTACCAGCTCAACGGCCTGGCCGGCTACTTCAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CCA 90 bp AGCTCCGGTAGAAGGCCCCCAACCCCTCGGTCCTCCACACCGTCCGGATGCAGCCTTCACCACTTCTGCTaGATTCATTACCGCATCGTG +
Preference number: 4 (lower is better)
Translates to: SSGRRPPTPRSSTPSGCSLHHFC*IHYRIV
Trigger: CACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAG...GCTGCATCCGGACGGTGTGGAGGACCGAGGGGTTGGGGGCCTTCTACCGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CCA 90 bp GCTCCGGTAGAAGGCCCCCAACCCCTCGGTCCTCCACACCGTCCGGATGCAGCTATGAAGTGGATGGACTaGAAGGGGATGTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: APVEGPQPLGPPHRPDAAMKWMD*KGMFMV
Trigger: GACCATGAACATCCCCTTCCAGTCCATCCACTTCAT...AGCTGCATCCGGACGGTGTGGAGGACCGAGGGGTTGGGGGCCTTCTACCGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR CCA 90 bp GTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACCAAATGGCACAGCTAGGGGCGTTAACTGCCAGATaGGACAGGGCAGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: VGIPLHGSLAEHQMAQLGALTAR*DRAAAK
Trigger: CTTGGCTGCTGCCCTGTCCCATCTGGCAGTTAACGC...CCCTAGCTGTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp GCTGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCAAGTCCACCGGGTACATaGCCGAGTGCTCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: AASPLLLDSLPHRGAGWPSPPGT*PSAPGS
Trigger: GGATCCTGGAGCACTCGGTCATGTACCCGGTGGACT...TGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR TCA 90 bp ATCTGCAAGCGCTGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCCCGTCCGGATGCAGCTaGTTGCTGACCGGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: ICKRCFTTSAGFITASWSPSGCS*LLTGAA
Trigger: CGCAGCACCGGTCAGCAATCAGCTGCATCCGGACGG...GCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCAGCGCTTGCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR TCA 90 bp AGAAATGGCGGTGGAGGGCATCTGGTAGATGACACGCGCCTGGATGCCTTTGAACCAGCCCGCCTGAGATaGTGTGGGACTGCGGGTTGT +
Preference number: 4 (lower is better)
Translates to: RNGGGGHLVDDTRLDAFEPARLR*CGTAGC
Trigger: ACAACCCGCAGTCCCACATCATCTCAGGCGGGCTGG...TTCAAAGGCATCCAGGCGCGTGTCATCTACCAGATGCCCTCCACCGCCATTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR TCA 90 bp GGGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTAGGGCCACGTTCTCCTaGGTGTTCAGAAGGGTCTTA +
Preference number: 4 (lower is better)
Translates to: GRGLQSGPTELQGPVFAFRATFS*VFRRVL
Trigger: TAAGACCCTTCTGAACACTCAGGAGAACGTGGCCCT...AAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp AAACACCTGCCCCACAAGTCGCCAAATGCTGCCTATCAAGGGCTTCTAAGTGCTAGCCGGCCAGGCCGTTaGGCTGGTACACCGTCCGGA +
Preference number: 4 (lower is better)
Translates to: KHLPHKSPNAAYQGLLSASRPGR*AGTPSG
Trigger: TCCGGACGGTGTACCAGCTCAACGGCCTGGCCGGCT...AGCACTTAGAAGCCCTTGATAGGCAGCATTTGGCGACTTGTGGGGCAGGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp GGCCAGCGAGAGGGCCACGTTCTCCTGAGTGTTCAGAAGGGTCTTACAGACGTCAGGGCATCTGGTAGATaGCACGCGCCTGGATGCCTT +
Preference number: 4 (lower is better)
Translates to: GQREGHVLLSVQKGLTDVRASGR*HAPGCL
Trigger: AAGGCATCCAGGCGCGTGTCATCTACCAGATGCCCT...GACGTCTGTAAGACCCTTCTGAACACTCAGGAGAACGTGGCCCTCTCGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR TCA 90 bp GTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACCAAATGGCACAGCTAGGGCATCCCCATGTGGGTTaGGGCTGCAACTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: VGIPLHGSLAEHQMAQLGHPHVG*GCNWFW
Trigger: CCAAAACCAGTTGCAGCCTCAACCCACATGGGGATG...CCCTAGCTGTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp ACCGTCCGGATGCAGCTGATTGCTGACCGGTGCTGCGAGTTGTACATCTGCAAGGGCATGGGCCGGCCCTaGACCCATGATCATGACGTT +
Preference number: 4 (lower is better)
Translates to: TVRMQLIADRCCELYICKGMGRP*THDHDV
Trigger: AACGTCATGATCATGGGTGCAGGGCCGGCCCATGCC...CTTGCAGATGTACAACTCGCAGCACCGGTCAGCAATCAGCTGCATCCGGACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR GCA 90 bp GGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTCCTGATTGCTGACCGGTaGTGCGAGTTGTACATCTGC +
Preference number: 4 (lower is better)
Translates to: GGACNQGPQSSRVRFLPFLIADR*CELYIC
Trigger: GCAGATGTACAACTCGCAGCACCGGTCAGCAATCAG...GAAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp CCCAAGTCCTTCCTGTCCACCACCACCTCGGATGTCCCCGCACACAGCCTTCCGCATGCTTCCCTAGACTaGACAGGGAAACACAGGAGA +
Preference number: 4 (lower is better)
Translates to: PKSFLSTTTSDVPAHSLPHASLD*TGKHRR
Trigger: TCTCCTGTGTTTCCCTGTGCAGTCTAGGGAAGCATG...CGGAAGGCTGTGTGCGGGGACATCCGAGGTGGTGGTGGACAGGAAGGACTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp GCTCCGGTAGAAGGCCCCCAACCCCTCGGTCCTCCACACCGTCCGGATGCAGCTTTGTGTACTGGGCTTTaGGATCTGGACTCAAACTCT +
Preference number: 4 (lower is better)
Translates to: APVEGPQPLGPPHRPDAALCTGL*DLDSNS
Trigger: AGAGTTTGAGTCCAGATCCCAAAGCCCAGTACACAA...AGCTGCATCCGGACGGTGTGGAGGACCGAGGGGTTGGGGGCCTTCTACCGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CCA 90 bp GCCATACCCGACAGCCGGCCGCTGATGTTGGCCAGCGAGAGGGCCACGTTCTCCTTGTGTACTGGGCTTTaGGATCTGGACTCAAACTCT +
Preference number: 4 (lower is better)
Translates to: AIPDSRPLMLASERATFSLCTGL*DLDSNS
Trigger: AGAGTTTGAGTCCAGATCCCAAAGCCCAGTACACAA...GGAGAACGTGGCCCTCTCGCTGGCCAACATCAGCGGCCGGCTGTCGGGTATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CCA 90 bp AGACCAAGAAATGGCGGTGGAGGGCATCTGGTAGATGACACGCGCCTGGATGCCCATCGTGGAGCAGGGTaGCCATACTCCCAGCTATCC +
Preference number: 4 (lower is better)
Translates to: RPRNGGGGHLVDDTRLDAHRGAG*PYSQLS
Trigger: GGATAGCTGGGAGTATGGCCACCCTGCTCCACGATG...GGCATCCAGGCGCGTGTCATCTACCAGATGCCCTCCACCGCCATTTCTTGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CCA 90 bp AGAAATGGCGGTGGAGGGCATCTGGTAGATGACACGCGCCTGGATGCCTTTGAAGCCAGGCCGTTGAGCTaGTACACCGTCCGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RNGGGGHLVDDTRLDAFEARPLS*YTVRKA
Trigger: TGCCTTCCGGACGGTGTACCAGCTCAACGGCCTGGC...TTCAAAGGCATCCAGGCGCGTGTCATCTACCAGATGCCCTCCACCGCCATTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CCA 90 bp GAGCTGGTACACCGTCCGGAAGGCATTGGCCATACCCGACAGCCGGCCGCTGATGCTCGATTTTCCAGCTaGCGCTTGGTGAGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: ELVHRPEGIGHTRQPAADARFSS*RLVRKY
Trigger: GTACTTTCTCACCAAGCGCCAGCTGGAAAATCGAGC...ATCAGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGGTGTACCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR TCA 90 bp TTTGAAGTAGCCGGCCAGGCCGTTGAGCTGGTACACCGTCCGGAAGGCATTGGCAGGGCCACGTTCTCCTaGGTGTTCAGAAGGGTCTTA +
Preference number: 4 (lower is better)
Translates to: FEVAGQAVELVHRPEGIGRATFS*VFRRVL
Trigger: TAAGACCCTTCTGAACACTCAGGAGAACGTGGCCCT...GCCAATGCCTTCCGGACGGTGTACCAGCTCAACGGCCTGGCCGGCTACTTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR TCA 90 bp ACCTCTGTCACTGATTTCTCCCCAGGCTTCAGAAAGCGGAGGGGAACAGAAAAAAGCCGGCCAGGCCGTTaGGCTGGTACACCGTCCGGA +
Preference number: 4 (lower is better)
Translates to: TSVTDFSPGFRKRRGTEKSRPGR*AGTPSG
Trigger: TCCGGACGGTGTACCAGCTCAACGGCCTGGCCGGCT...TTTTTCTGTTCCCCTCCGCTTTCTGAAGCCTGGGGAGAAATCAGTGACAGAGGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR TCA 90 bp ACCGTCCGGATGCAGCTGATTGCTGACCGGTGCTGCGAGTTGTACATCTGCAAGAGGGCATCTGGTAGATaGCACGCGCCTGGATGCCTT +
Preference number: 4 (lower is better)
Translates to: TVRMQLIADRCCELYICKRASGR*HAPGCL
Trigger: AAGGCATCCAGGCGCGTGTCATCTACCAGATGCCCT...CTTGCAGATGTACAACTCGCAGCACCGGTCAGCAATCAGCTGCATCCGGACGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR TCA 90 bp CTGCGCCTCCTCGGTAAGATGCACCACGCTGACCGTGATGGGTGGCGGCAGGTCGCCGGCCACATTCACTaGTTTATTACTTTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: LRLLGKMHHADRDGWRQVAGHIH*FITLLP
Trigger: AGGCAACAAAGTAATAAATCAGTGAATGTGGCCGGC...GACCTGCCGCCACCCATCACGGTCAGCGTGGTGCATCTTACCGAGGAGGCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp GTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACCAAATGGCACAGCTAGGGAAAGACAAGCTCCGGTaGGGGCTCCAAATCAGAGAC +
Preference number: 4 (lower is better)
Translates to: VGIPLHGSLAEHQMAQLGKDKLR*GLQIRD
Trigger: GTCTCTGATTTGGAGCCCTCACCGGAGCTTGTCTTT...CCCTAGCTGTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp ACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCATACTCCCAGGCATGGGCCGGCCCTaGACCCATGATCATGACGTT +
Preference number: 4 (lower is better)
Translates to: TTSAGFITASWSRVAILPGMGRP*THDHDV
Trigger: AACGTCATGATCATGGGTGCAGGGCCGGCCCATGCC...TGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR GCA 90 bp GACAGTGCAGCTCGTCTCGTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACTACATCTGCAAGCGCTaGTTCACCACTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: DSAARLVGIPLHGSLAEHYICKR*FTTSAG
Trigger: TCCAGCAGAAGTGGTGAAGCAGCGCTTGCAGATGTA...GTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGACGAGACGAGCTGCACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp GGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTCATTGCTGACCGGTGCTaGGAGTTGTACATCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GGACNQGPQSSRVRFLPFIADRC*ELYICK
Trigger: CTTGCAGATGTACAACTCGCAGCACCGGTCAGCAAT...GAAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp GTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACCAAATGGCACAGCTAGGGCCCCAAGGCACTGTGTaGATGGTCCCAAGATGGAAA +
Preference number: 4 (lower is better)
Translates to: VGIPLHGSLAEHQMAQLGPQGTV*MVPRWK
Trigger: TTTCCATCTTGGGACCATGCACACAGTGCCTTGGGG...CCCTAGCTGTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp GGGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTGTGGCACTAACTGGCTaGAGATGTCACTCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: GRGLQSGPTELQGPVFAFVALTG*RCHSKD
Trigger: GTCTTTGGAGTGACATCTGCAGCCAGTTAGTGCCAC...AAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp TTTGAAGTAGCCGGCCAGGCCGTTGAGCTGGTACACCGTCCGGAAGGCATTGGCTTCATTACCGCATCGTaGAGCAGGGTGGCCATACTC +
Preference number: 4 (lower is better)
Translates to: FEVAGQAVELVHRPEGIGFITAS*SRVAIL
Trigger: GAGTATGGCCACCCTGCTCCACGATGCGGTAATGAA...GCCAATGCCTTCCGGACGGTGTACCAGCTCAACGGCCTGGCCGGCTACTTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CCA 90 bp AACCCCTCGGTCCTCCACACCGTCCGGATGCAGCTGATTGCTGACCGGTGCTGCCTTCACCACTTCTGCTaGATTCATTACCGCATCGTG +
Preference number: 4 (lower is better)
Translates to: NPSVLHTVRMQLIADRCCLHHFC*IHYRIV
Trigger: CACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAG...GCAGCACCGGTCAGCAATCAGCTGCATCCGGACGGTGTGGAGGACCGAGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CCA 90 bp GGCCAGCGAGAGGGCCACGTTCTCCTGAGTGTTCAGAAGGGTCTTACAGACGTCATCCCGTTGGCTAGGTaGCTGTTTCCTTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GQREGHVLLSVQKGLTDVIPLAR*LFPWWW
Trigger: CCACCACCAAGGAAACAGCCACCTAGCCAACGGGAT...GACGTCTGTAAGACCCTTCTGAACACTCAGGAGAACGTGGCCCTCTCGCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523930.1
CDS-3UTR CCA 90 bp GTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACCAAATGGCACAGCTAGGGTCCCAGCTATCCCGTTaGCTAGGTGGCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: VGIPLHGSLAEHQMAQLGSQLSR*LGGCFL
Trigger: AAGGAAACAGCCACCTAGCCAACGGGATAGCTGGGA...CCCTAGCTGTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp CTGCGAAGCCTGTGTTCTCGGGTGACGCAGAGCAGACAAGGATGCAGAATGGCTTTCACGGGGCACACGTaGGAGGTACCCAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LRSLCSRVTQSRQGCRMAFTGHT*EVPSLA
Trigger: AGCCAAACTGGGTACCTCCCACGTGTGCCCCGTGAA...AGCCATTCTGCATCCTTGTCTGCTCTGCGTCACCCGAGAACACAGGCTTCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp GCCAGGCCGTTGAGCTGGTACACCGTCCGGAAGGCATTGGCCATACCCGACAGCTGGATGGACTTCTGCTaGATTCATTACCGCATCGTG +
Preference number: 4 (lower is better)
Translates to: ARPLSWYTVRKALAIPDSWMDFC*IHYRIV
Trigger: CACGATGCGGTAATGAATCCAGCAGAAGTCCATCCA...GCTGTCGGGTATGGCCAATGCCTTCCGGACGGTGTACCAGCTCAACGGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523930.1
3UTR CAA 72 bp ATCAGAGACAGTGCAGCTCGTCTCGTCGGTATTCCCTaGCACGGCAGCCTGGCAGAGCACCAAATGGCACAG +
Preference number: 4 (lower is better)
Translates to: IRDSAARLVGIP*HGSLAEHQMAQ
Trigger: CTGTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGACGAGACGAGCTGCACTGTCTCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp AGCGCTGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGGATGCAGCTGATTGCTaGCCGGTGCTGCGAGTTGTA +
Preference number: 4 (lower is better)
Translates to: SAASPLLLDSLPHRGAGWDAADC*PVLRVV
Trigger: TACAACTCGCAGCACCGGTCAGCAATCAGCTGCATC...CCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCAGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR TCA 90 bp AGCTCGATTTTCCAGCTGGCGCTTGGTGAGAAAGTACTTGAAGAACTCATAGACCCGACAGCCGGCCGCTaGTGTTGGCCAGCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SSIFQLALGEKVLEELIDPTAGR*CWPARG
Trigger: CCCTCTCGCTGGCCAACATCAGCGGCCGGCTGTCGG...GTCTATGAGTTCTTCAAGTACTTTCTCACCAAGCGCCAGCTGGAAAATCGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR GCA 90 bp GGCGGTGGAGGGCATCTGGTAGATGACACGCGCCTGGATGCCTTTGAAGTAGCCTACATCTGCAAGCGCTaGTTCACCACTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GGGGHLVDDTRLDAFEVAYICKR*FTTSAG
Trigger: TCCAGCAGAAGTGGTGAAGCAGCGCTTGCAGATGTA...GGCTACTTCAAAGGCATCCAGGCGCGTGTCATCTACCAGATGCCCTCCACCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR GCA 90 bp CGGCACACACCATTTCAGAAAGCGAGGCTGCGAAGCCTGTGTTCTCGGGTGACGAAAAGAATCCAGGCCTaGGCCTCCTCGGTAAGATGC +
Preference number: 4 (lower is better)
Translates to: RHTPFQKARLRSLCSRVTKRIQA*ASSVRC
Trigger: GCATCTTACCGAGGAGGCGCAGGCCTGGATTCTTTT...CGTCACCCGAGAACACAGGCTTCGCAGCCTCGCTTTCTGAAATGGTGTGTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp CTGCGCCTCCTCGGTAAGATGCACCACGCTGACCGTGATGGGTGGCGGCAGGTCACAATGTGTTGGAGATaGAGCTTTATGGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: LRLLGKMHHADRDGWRQVTMCWR*SFMGTL
Trigger: CAAAGTCCCCATAAAGCTGCATCTCCAACACATTGT...GACCTGCCGCCACCCATCACGGTCAGCGTGGTGCATCTTACCGAGGAGGCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp TACACCGTCCGGAAGGCATTGGCCATACCCGACAGCCGGCCGCTGATGTTGGCCAAGTGGATGGACTTCTaGTGGATTCATTACCGCATC +
Preference number: 4 (lower is better)
Translates to: YTVRKALAIPDSRPLMLAKWMDF*WIHYRI
Trigger: GATGCGGTAATGAATCCAGCAGAAGTCCATCCACTT...GGCCAACATCAGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523930.1
CDS-3UTR CCA 90 bp TCATTACCGCATCGTGGAGCAGGGTGGCCATACTCCCAGCTATCCCTGCAAAACGCAAAATACATGGCATaGGCCGGCCCTGCACCCATG +
Preference number: 4 (lower is better)
Translates to: SLPHRGAGWPYSQLSLQNAKYMA*AGPAPM
Trigger: CATGGGTGCAGGGCCGGCCCATGCCATGTATTTTGC...GTTTTGCAGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417331.6
CDS-3UTR CCA 90 bp GCCCCCAACCCCTCGGTCCTCCACACCGTCCGGATGCAGCTGATTGCTGACCGGCTGTTTCCTTGGTGGTaGAAAACGTCATTTAAAGTC +
Preference number: 4 (lower is better)
Translates to: APNPSVLHTVRMQLIADRLFPWW*KTSFKV
Trigger: GACTTTAAATGACGTTTTCCACCACCAAGGAAACAG...CCGGTCAGCAATCAGCTGCATCCGGACGGTGTGGAGGACCGAGGGGTTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CCA 90 bp GCTCCGGTAGAAGGCCCCCAACCCCTCGGTCCTCCACACCGTCCGGATGCAGCTTGGCTGTTTCCTTGGTaGTGGAAAACGTCATTTAAA +
Preference number: 4 (lower is better)
Translates to: APVEGPQPLGPPHRPDAAWLFPW*WKTSFK
Trigger: TTTAAATGACGTTTTCCACCACCAAGGAAACAGCCA...AGCTGCATCCGGACGGTGTGGAGGACCGAGGGGTTGGGGGCCTTCTACCGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CCA 90 bp AAGTCCTTCCTGTCCACCACCACCTCGGATGTCCCCGCACACAGCCTTCCGGTGCTTCACCACTTCTGCTaGATTCATTACCGCATCGTG +
Preference number: 4 (lower is better)
Translates to: KSFLSTTTSDVPAHSLPVLHHFC*IHYRIV
Trigger: CACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAG...CACCGGAAGGCTGTGTGCGGGGACATCCGAGGTGGTGGTGGACAGGAAGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000519973.6
CDS-3UTR CCA 90 bp GCTTCACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCATACGAGAGGGCAAGGGGCTaGATGCAGGCAGAGAATGAC +
Preference number: 4 (lower is better)
Translates to: ASPLLLDSLPHRGAGWPYERARG*MQAEND
Trigger: GTCATTCTCTGCCTGCATCCAGCCCCTTGCCCTCTC...GTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR CCA 90 bp GCAAGCGCTGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGGAACCGTTGGCTAGGTaGCTGTTTCCTTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ASAASPLLLDSLPHRGAGEPLAR*LFPWWW
Trigger: CCACCACCAAGGAAACAGCCACCTAGCCAACGGTTC...CCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCAGCGCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417331.6
CDS-3UTR CCA 90 bp GGGCTCCAAATCAGAGACAGTGCAGCTCGTCTCGTCGGTATTCCCTTGCACGGCATGCAGAATGGCTTCTaGAGAGGGGTCTTCCGACTC +
Preference number: 4 (lower is better)
Translates to: GLQIRDSAARLVGIPLHGMQNGF*RGVFRL
Trigger: GAGTCGGAAGACCCCTCTCCAGAAGCCATTCTGCAT...GCCGTGCAAGGGAATACCGACGAGACGAGCTGCACTGTCTCTGATTTGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp GACAGTGCAGCTCGTCTCGTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACGGACTGCAGTCTGCGTaGAGCAACAATACCAACTTT +
Preference number: 4 (lower is better)
Translates to: DSAARLVGIPLHGSLAEHGLQSA*SNNTNF
Trigger: AAAGTTGGTATTGTTGCTCCACGCAGACTGCAGTCC...GTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGACGAGACGAGCTGCACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp GTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACCAAATGGCACAGCTAGGGTCAGGTGGCACTAACTaGCTGCAGATGTCACTCCAA +
Preference number: 4 (lower is better)
Translates to: VGIPLHGSLAEHQMAQLGSGGTN*LQMSLQ
Trigger: TTGGAGTGACATCTGCAGCCAGTTAGTGCCACCTGA...CCCTAGCTGTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp GGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTCCCTTTTTCGTTCACCTaGTGGAAGAATTCAACCCTC +
Preference number: 4 (lower is better)
Translates to: GGACNQGPQSSRVRFLPFPFSFT*WKNSTL
Trigger: GAGGGTTGAATTCTTCCATCAGGTGAACGAAAAAGG...GAAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp GCCTTTGAAGTAGCCGGCCAGGCCGTTGAGCTGGTACACCGTCCGGAAGGCATTTCTGGACTCAAACTCTaGATTCGTGTCTTCACCGAG +
Preference number: 4 (lower is better)
Translates to: AFEVAGQAVELVHRPEGISGLKL*IRVFTE
Trigger: CTCGGTGAAGACACGAATGCAGAGTTTGAGTCCAGA...AATGCCTTCCGGACGGTGTACCAGCTCAACGGCCTGGCCGGCTACTTCAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR GCA 90 bp TGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCATACTCCCAGCTATCCCCTGATTGCTGACCGGTaGTGCGAGTTGTACATCTGC +
Preference number: 4 (lower is better)
Translates to: CWIHYRIVEQGGHTPSYPLIADR*CELYIC
Trigger: GCAGATGTACAACTCGCAGCACCGGTCAGCAATCAG...GGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR GCA 90 bp GCTGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCAGGGCAAGGGGCTGGATaGAGGCAGAGAATGACTTTA +
Preference number: 4 (lower is better)
Translates to: AASPLLLDSLPHRGAGWPGQGAG*RQRMTL
Trigger: TAAAGTCATTCTCTGCCTGCATCCAGCCCCTTGCCC...TGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR GCA 90 bp CAGGCCGTTGAGCTGGTACACCGTCCGGAAGGCATTGGCCATACCCGACAGCCGAGAAAAGCTACATTCTaGCCAGGGAGGAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: QAVELVHRPEGIGHTRQPRKATF*PGRKRK
Trigger: TTTTCTCTTCCTCCCTGGGCAGAATGTAGCTTTTCT...CGGCTGTCGGGTATGGCCAATGCCTTCCGGACGGTGTACCAGCTCAACGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR CCA 90 bp GGGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTTTGTGTACTGGGCTTTaGGATCTGGACTCAAACTCT +
Preference number: 4 (lower is better)
Translates to: GRGLQSGPTELQGPVFAFLCTGL*DLDSNS
Trigger: AGAGTTTGAGTCCAGATCCCAAAGCCCAGTACACAA...AAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp ATCTGCAAGCGCTGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCGCAAAATACATGGCATaGGCCGGCCCTGCACCCATG +
Preference number: 4 (lower is better)
Translates to: ICKRCFTTSAGFITASWSAKYMA*AGPAPM
Trigger: CATGGGTGCAGGGCCGGCCCATGCCATGTATTTTGC...GCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCAGCGCTTGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CCA 90 bp TCCGACTCGGGCATGAGGGTCCAGGTCAGACCTCAGCCGCAGGGCCCTAGCAGACTGTTTCCTTGGTGGTaGAAAACGTCATTTAAAGTC +
Preference number: 4 (lower is better)
Translates to: SDSGMRVQVRPQPQGPSRLFPWW*KTSFKV
Trigger: GACTTTAAATGACGTTTTCCACCACCAAGGAAACAG...TCTGCTAGGGCCCTGCGGCTGAGGTCTGACCTGGACCCTCATGCCCGAGTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp GGATTCATTACCGCATCGTGGAGCAGGGTGGCCATACTCCCAGCTATCCCTGCATTCATTACCGCATCGTaGAGCAGGGTGGCCATACTC +
Preference number: 4 (lower is better)
Translates to: GFITASWSRVAILPAIPAFITAS*SRVAIL
Trigger: GAGTATGGCCACCCTGCTCCACGATGCGGTAATGAA...TGCAGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417331.6
CDS-3UTR CCA 90 bp GCTGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCATTCTCAGGAAGTTCCTaGAACCGTTGGCTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: AASPLLLDSLPHRGAGWPFSGSS*NRWLGG
Trigger: GCCACCTAGCCAACGGTTCCAGGAACTTCCTGAGAA...TGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417331.6
CDS-3UTR CCA 90 bp GGGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTAAGGTTACACTGAATTaGTCACCAGGGTGGGATAGT +
Preference number: 4 (lower is better)
Translates to: GRGLQSGPTELQGPVFAFKVTLN*SPGWDS
Trigger: ACTATCCCACCCTGGTGACCAATTCAGTGTAACCTT...AAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp CCTTTAGTATGGAGCTCGATTTTCCAGCTGGCGCTTGGTGAGAAAGTACTTGAAGCGCCTGGATGCCTTTaGAGTAGCCGGCCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: PLVWSSIFQLALGEKVLEAPGCL*SSRPGR
Trigger: ACGGCCTGGCCGGCTACTTCAAAGGCATCCAGGCGC...TTCAAGTACTTTCTCACCAAGCGCCAGCTGGAAAATCGAGCTCCATACTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR TCA 90 bp GGGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTAAAGACACCAATGACTaGGTACGTGCAAAGGTTACA +
Preference number: 4 (lower is better)
Translates to: GRGLQSGPTELQGPVFAFKDTND*VRAKVT
Trigger: TGTAACCTTTGCACGTACTCAGTCATTGGTGTCTTT...AAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp GCGCTGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCTGTCTGGGTGTGCATTaGACACACAACTCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: ALLHHFCWIHYRIVEQGGCLGVH*THNSEF
Trigger: GAACTCAGAGTTGTGTGTGCAATGCACACCCAGACA...GCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR GCA 90 bp CCGCATCGTGGAGCAGGGTGGCCATACTCCCAGCTATCCCTGCAAAACAAACTCTACATCTGCAAGCGCTaGTTCACCACTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PHRGAGWPYSQLSLQNKLYICKR*FTTSAG
Trigger: TCCAGCAGAAGTGGTGAAGCAGCGCTTGCAGATGTA...GAGTTTGTTTTGCAGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417331.6
CDS-3UTR GCA 90 bp TGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCATACTCCCAGCTATCCCTGCGAGTTGTACATCTaGAAGCGCTGCTTCACCACT +
Preference number: 4 (lower is better)
Translates to: CWIHYRIVEQGGHTPSYPCELYI*KRCFTT
Trigger: AGTGGTGAAGCAGCGCTTGCAGATGTACAACTCGCA...GGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR GCA 90 bp GACAGTGCAGCTCGTCTCGTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACAGAAAAGCTACATTCTaGCCAGGGAGGAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: DSAARLVGIPLHGSLAEHRKATF*PGRKRK
Trigger: TTTTCTCTTCCTCCCTGGGCAGAATGTAGCTTTTCT...GTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGACGAGACGAGCTGCACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp GTCCGGATGCAGCTGATTGCTGACCGGTGCTGCGAGTTGTACATCTGCAAGCGCCAGAAAATTACCCTCTaGGATCGGGTGTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: VRMQLIADRCCELYICKRQKITL*DRVFSG
Trigger: TCCTGAGAACACCCGATCGCAGAGGGTAATTTTCTG...GCGCTTGCAGATGTACAACTCGCAGCACCGGTCAGCAATCAGCTGCATCCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417331.6
CDS-3UTR GCA 90 bp AAACACCTGCCCCACAAGTCGCCAAATGCTGCCTATCAAGGGCTTCTAAGTGCTGGAGAAGGCGTTAACTaGCAGATGGGACAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KHLPHKSPNAAYQGLLSAGEGVN*QMGQGS
Trigger: GCTGCCCTGTCCCATCTGGCAGTTAACGCCTTCTCC...AGCACTTAGAAGCCCTTGATAGGCAGCATTTGGCGACTTGTGGGGCAGGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp CGGCACACACCATTTCAGAAAGCGAGGCTGCGAAGCCTGTGTTCTCGGGTGACGCCAGGGTCCGGTTTTTaGCTTTCCTTTTTGACAGAG +
Preference number: 4 (lower is better)
Translates to: RHTPFQKARLRSLCSRVTPGSGF*LSFLTE
Trigger: CTCTGTCAAAAAGGAAAGGCAAAAACCGGACCCTGG...CGTCACCCGAGAACACAGGCTTCGCAGCCTCGCTTTCTGAAATGGTGTGTGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp GACAGTGCAGCTCGTCTCGTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACCTTGTATCTGCTCAGTaGTTCACAACTTTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: DSAARLVGIPLHGSLAEHLVSAQ*FTTFKA
Trigger: AGCCTTGAAAGTTGTGAAGCACTGAGCAGATACAAG...GTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGACGAGACGAGCTGCACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp GCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCATACTCCCAGCTATCCCTCTGGGCTTTGGGATCTaGACTCAAACTCTGCATTCG +
Preference number: 4 (lower is better)
Translates to: AGFITASWSRVAILPAIPLGFGI*TQTLHS
Trigger: CGAATGCAGAGTTTGAGTCCAGATCCCAAAGCCCAG...AGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CCA 90 bp CAAGCTCCGGTGAGGGCTCCAAATCAGAGACAGTGCAGCTCGTCTCGTCGGTATCTGGGCTTTGGGATCTaGACTCAAACTCTGCATTCG +
Preference number: 4 (lower is better)
Translates to: QAPVRAPNQRQCSSSRRYLGFGI*TQTLHS
Trigger: CGAATGCAGAGTTTGAGTCCAGATCCCAAAGCCCAG...ATACCGACGAGACGAGCTGCACTGTCTCTGATTTGGAGCCCTCACCGGAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp AAACACCTGCCCCACAAGTCGCCAAATGCTGCCTATCAAGGGCTTCTAAGTGCTCATCGTGGAGCAGGGTaGCCATACTCCCAGCTATCC +
Preference number: 4 (lower is better)
Translates to: KHLPHKSPNAAYQGLLSAHRGAG*PYSQLS
Trigger: GGATAGCTGGGAGTATGGCCACCCTGCTCCACGATG...AGCACTTAGAAGCCCTTGATAGGCAGCATTTGGCGACTTGTGGGGCAGGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp GTGGACTTTACGGCTTTCTACATCCCCATGTGGGTTGAGGCTGCAACTGGTTTTCCTTGCACGGCAGCCTaGCAGAGCACCAAATGGCAC +
Preference number: 4 (lower is better)
Translates to: VDFTAFYIPMWVEAATGFPCTAA*QSTKWH
Trigger: GTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGG...AAAACCAGTTGCAGCCTCAACCCACATGGGGATGTAGAAAGCCGTAAAGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp CCATTTAACACGAACCCAAGGCAGGTTGAGAGCGGAGATGTAAACATTTTCAACGCTGACCGTGATGGGTaGCGGCAGGTCAGGACCCGG +
Preference number: 4 (lower is better)
Translates to: PFNTNPRQVESGDVNIFNADRDG*RQVRTR
Trigger: CCGGGTCCTGACCTGCCGCCACCCATCACGGTCAGC...GTTGAAAATGTTTACATCTCCGCTCTCAACCTGCCTTGGGTTCGTGTTAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp GCAAGCGCTGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTCTGGACTCAAACTCTaGATTCGTGTCTTCACCGAG +
Preference number: 4 (lower is better)
Translates to: ASAASPLLLDSLPHRGAGSGLKL*IRVFTE
Trigger: CTCGGTGAAGACACGAATGCAGAGTTTGAGTCCAGA...CCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCAGCGCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CCA 90 bp TCATTACCGCATCGTGGAGCAGGGTGGCCATACTCCCAGCTATCCCTGCAAAACCTGGGCTTTGGGATCTaGACTCAAACTCTGCATTCG +
Preference number: 4 (lower is better)
Translates to: SLPHRGAGWPYSQLSLQNLGFGI*TQTLHS
Trigger: CGAATGCAGAGTTTGAGTCCAGATCCCAAAGCCCAG...GTTTTGCAGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417331.6
CDS-3UTR CCA 90 bp AAGTCCTTCCTGTCCACCACCACCTCGGATGTCCCCGCACACAGCCTTCCGGTGTGGCTGTTTCCTTGGTaGTGGAAAACGTCATTTAAA +
Preference number: 4 (lower is better)
Translates to: KSFLSTTTSDVPAHSLPVWLFPW*WKTSFK
Trigger: TTTAAATGACGTTTTCCACCACCAAGGAAACAGCCA...CACCGGAAGGCTGTGTGCGGGGACATCCGAGGTGGTGGTGGACAGGAAGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000519973.6
CDS-3UTR CCA 90 bp CGGCACACACCATTTCAGAAAGCGAGGCTGCGAAGCCTGTGTTCTCGGGTGACGAGGTGGCTGTTTCCTTaGTGGTGGAAAACGTCATTT +
Preference number: 4 (lower is better)
Translates to: RHTPFQKARLRSLCSRVTRWLFP*WWKTSF
Trigger: AAATGACGTTTTCCACCACCAAGGAAACAGCCACCT...CGTCACCCGAGAACACAGGCTTCGCAGCCTCGCTTTCTGAAATGGTGTGTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp GCCTTTGAAGTAGCCGGCCAGGCCGTTGAGCTGGTACACCGTCCGGAAGGCATTAGCTTAGTTAGATCTTaGCGTTGTAGAGACCTGTTG +
Preference number: 4 (lower is better)
Translates to: AFEVAGQAVELVHRPEGISLVRS*RCRDLL
Trigger: CAACAGGTCTCTACAACGCCAAGATCTAACTAAGCT...AATGCCTTCCGGACGGTGTACCAGCTCAACGGCCTGGCCGGCTACTTCAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR CCA 90 bp CCATTTAACACGAACCCAAGGCAGGTTGAGAGCGGAGATGTAAACATTTTCAACCCGTCCGGAAGGCATTaGCCATACCCGACAGCCGGC +
Preference number: 4 (lower is better)
Translates to: PFNTNPRQVESGDVNIFNPSGRH*PYPTAG
Trigger: GCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGG...GTTGAAAATGTTTACATCTCCGCTCTCAACCTGCCTTGGGTTCGTGTTAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp AAGTCCTTCCTGTCCACCACCACCTCGGATGTCCCCGCACACAGCCTTCCGGTGTTTTCAACAGTAGCGTaGACTTTACGGCTTTCTACA +
Preference number: 4 (lower is better)
Translates to: KSFLSTTTSDVPAHSLPVFSTVA*TLRLST
Trigger: TGTAGAAAGCCGTAAAGTCCACGCTACTGTTGAAAA...CACCGGAAGGCTGTGTGCGGGGACATCCGAGGTGGTGGTGGACAGGAAGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp CCATTTAACACGAACCCAAGGCAGGTTGAGAGCGGAGATGTAAACATTTTCAACCCAGCCCGCCTGAGATaGTGTGGGACTGCGGGTTGT +
Preference number: 4 (lower is better)
Translates to: PFNTNPRQVESGDVNIFNPARLR*CGTAGC
Trigger: ACAACCCGCAGTCCCACATCATCTCAGGCGGGCTGG...GTTGAAAATGTTTACATCTCCGCTCTCAACCTGCCTTGGGTTCGTGTTAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp GCTTCACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCATACCTGCTTCACCACTTCTaGTGGATTCATTACCGCATC +
Preference number: 4 (lower is better)
Translates to: ASPLLLDSLPHRGAGWPYLLHHF*WIHYRI
Trigger: GATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCAG...GTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR GCA 90 bp TTCATTACCGCATCGTGGAGCAGGGTGGCCATACTCCCAGCTATCCCTGCAAAAATTGCTGACCGGTGCTaGGAGTTGTACATCTGCAAG +
Preference number: 4 (lower is better)
Translates to: FITASWSRVAILPAIPAKIADRC*ELYICK
Trigger: CTTGCAGATGTACAACTCGCAGCACCGGTCAGCAAT...TTTTGCAGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417331.6
CDS-3UTR GCA 90 bp AAACACCTGCCCCACAAGTCGCCAAATGCTGCCTATCAAGGGCTTCTAAGTGCTGGGCAAGGGGCTGGATaGAGGCAGAGAATGACTTTA +
Preference number: 4 (lower is better)
Translates to: KHLPHKSPNAAYQGLLSAGQGAG*RQRMTL
Trigger: TAAAGTCATTCTCTGCCTGCATCCAGCCCCTTGCCC...AGCACTTAGAAGCCCTTGATAGGCAGCATTTGGCGACTTGTGGGGCAGGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp AACACTTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCTCGTCGGTATTCCCTTaGACGGCAGCCTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: NTCSPLKHTLFVLQVGSSSSVFP*TAAWQS
Trigger: GCTCTGCCAGGCTGCCGTGCAAGGGAATACCGACGA...GCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp CAAGCTCCGGTGAGGGCTCCAAATCAGAGACAGTGCAGCTCGTCTCGTCGGTATTTCACCTCTCCTTCTTaGATCCCTCTAACCAAAGGA +
Preference number: 4 (lower is better)
Translates to: QAPVRAPNQRQCSSSRRYFTSPS*IPLTKG
Trigger: TCCTTTGGTTAGAGGGATGCAAGAAGGAGAGGTGAA...ATACCGACGAGACGAGCTGCACTGTCTCTGATTTGGAGCCCTCACCGGAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp GCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCATACTCCCAGCTATCCCTTTGTGTACTGGGCTTTaGGATCTGGACTCAAACTCT +
Preference number: 4 (lower is better)
Translates to: AGFITASWSRVAILPAIPLCTGL*DLDSNS
Trigger: AGAGTTTGAGTCCAGATCCCAAAGCCCAGTACACAA...AGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CCA 90 bp GGCGGTGGAGGGCATCTGGTAGATGACACGCGCCTGGATGCCTTTGAAGTAGCCTGGCTGTTTCCTTGGTaGTGGAAAACGTCATTTAAA +
Preference number: 4 (lower is better)
Translates to: GGGGHLVDDTRLDAFEVAWLFPW*WKTSFK
Trigger: TTTAAATGACGTTTTCCACCACCAAGGAAACAGCCA...GGCTACTTCAAAGGCATCCAGGCGCGTGTCATCTACCAGATGCCCTCCACCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CCA 90 bp CGCGTGTGTGTGCGTGCGTGTGTCTGGGTGTGCATTGCACACACAACTCTGAGTAGGTGGCTGTTTCCTTaGTGGTGGAAAACGTCATTT +
Preference number: 4 (lower is better)
Translates to: RVCVRACVWVCIAHTTLSRWLFP*WWKTSF
Trigger: AAATGACGTTTTCCACCACCAAGGAAACAGCCACCT...ACTCAGAGTTGTGTGTGCAATGCACACCCAGACACACGCACGCACACACACGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR CCA 90 bp CTTCACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCATACTAGTTCCTGGAACCGTTaGCTAGGTGGCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LHHFCWIHYRIVEQGGHTSSWNR*LGGCFL
Trigger: AAGGAAACAGCCACCTAGCCAACGGTTCCAGGAACT...AGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417331.6
CDS-3UTR CCA 90 bp GTGGACTTTACGGCTTTCTACATCCCCATGTGGGTTGAGGCTGCAACTGGTTTTATCCCGTTGGCTAGGTaGCTGTTTCCTTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VDFTAFYIPMWVEAATGFIPLAR*LFPWWW
Trigger: CCACCACCAAGGAAACAGCCACCTAGCCAACGGGAT...AAAACCAGTTGCAGCCTCAACCCACATGGGGATGTAGAAAGCCGTAAAGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp AAACACCTGCCCCACAAGTCGCCAAATGCTGCCTATCAAGGGCTTCTAAGTGCTCCAGGGCCAGATCTCTaGTCCTGGAATTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: KHLPHKSPNAAYQGLLSAPGPDL*SWNFGE
Trigger: TTCCCCAAAATTCCAGGACCAGAGATCTGGCCCTGG...AGCACTTAGAAGCCCTTGATAGGCAGCATTTGGCGACTTGTGGGGCAGGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp CAAGCTCCGGTGAGGGCTCCAAATCAGAGACAGTGCAGCTCGTCTCGTCGGTATCCTTCTTCAAAGAGCTaGCAACAATTGAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QAPVRAPNQRQCSSSRRYPSSKS*QQLRGR
Trigger: TCTGCCTCTCAATTGTTGCCAGCTCTTTGAAGAAGG...ATACCGACGAGACGAGCTGCACTGTCTCTGATTTGGAGCCCTCACCGGAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp GTGGACTTTACGGCTTTCTACATCCCCATGTGGGTTGAGGCTGCAACTGGTTTTGTGCAAAGGTTACACTaGATTGGTCACCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VDFTAFYIPMWVEAATGFVQRLH*IGHQGG
Trigger: CCCACCCTGGTGACCAATTCAGTGTAACCTTTGCAC...AAAACCAGTTGCAGCCTCAACCCACATGGGGATGTAGAAAGCCGTAAAGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp TTAACAAACACTTGTATCTGCTCAGTGCTTCACAACTTTCAAGGCTTTTCTCAATGCCCACGCTCCCGCTaGGCAGCTCCATCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: LTNTCICSVLHNFQGFSQCPRSR*AAPSAS
Trigger: GCTGGCGGATGGAGCTGCGCAGCGGGAGCGTGGGCA...TTGAGAAAAGCCTTGAAAGTTGTGAAGCACTGAGCAGATACAAGTGTTTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp TTAACACCATTTAACACGAACCCAAGGCAGGTTGAGAGCGGAGATGTAAACATTCCCGGCCATCGCTCCTaGTGTCATGTGGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: LTPFNTNPRQVESGDVNIPGHRS*CHVGGH
Trigger: GTGTCCACCCACATGACAGCAGGAGCGATGGCCGGG...AATGTTTACATCTCCGCTCTCAACCTGCCTTGGGTTCGTGTTAAATGGTGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp CCGCATCGTGGAGCAGGGTGGCCATACTCCCAGCTATCCCTGCAAAACAAACTCACTCCCAGCTATCCCTaGAAAACAAACTCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: PHRGAGWPYSQLSLQNKLTPSYP*KTNSRK
Trigger: TTTTCTGGAGTTTGTTTTGCAGGGATAGCTGGGAGT...GAGTTTGTTTTGCAGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417331.6
CDS-3UTR GCA 90 bp TGCTTCAGCGTGGCATATCTTAAGTGGACCAAAAGGGGTGGTAGGATAATTTTTCAGCGGGCGAGATCCTaGCACCCAGCATGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: CFSVAYLKWTKRGGRIIFQRARS*HPACVR
Trigger: ACGCACACATGCTGGGTGGCAGGATCTCGCCCGCTG...AAAAATTATCCTACCACCCCTTTTGGTCCACTTAAGATATGCCACGCTGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp GTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACCAAATGGCACAGCTAGGGACAAACACTTGTATCTaGTCAGTGCTTCACAACTTT +
Preference number: 4 (lower is better)
Translates to: VGIPLHGSLAEHQMAQLGTNTCI*SVLHNF
Trigger: AAAGTTGTGAAGCACTGAGCAGATACAAGTGTTTGT...CCCTAGCTGTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp CATCTGGTAGATGACACGCGCCTGGATGCCTTTGAAGTAGCCGGCCAGGCCGTTCTGTTTCCTTGGTGGTaGAAAACGTCATTTAAAGTC +
Preference number: 4 (lower is better)
Translates to: HLVDDTRLDAFEVAGQAVLFPWW*KTSFKV
Trigger: GACTTTAAATGACGTTTTCCACCACCAAGGAAACAG...AACGGCCTGGCCGGCTACTTCAAAGGCATCCAGGCGCGTGTCATCTACCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CCA 90 bp GCGAGAGGGCCACGTTCTCCTGAGTGTTCAGAAGGGTCTTACAGACGTCCAGGGTGGCTGTTTCCTTGGTaGTGGAAAACGTCATTTAAA +
Preference number: 4 (lower is better)
Translates to: ARGPRSPECSEGSYRRPGWLFPW*WKTSFK
Trigger: TTTAAATGACGTTTTCCACCACCAAGGAAACAGCCA...CCCTGGACGTCTGTAAGACCCTTCTGAACACTCAGGAGAACGTGGCCCTCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CCA 90 bp CGCGTGTGTGTGCGTGCGTGTGTCTGGGTGTGCATTGCACACACAACTCTGAGTCTTTCAAAATACCGTTaGCTAGGTGGCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: RVCVRACVWVCIAHTTLSLSKYR*LGGCFL
Trigger: AAGGAAACAGCCACCTAGCCAACGGTATTTTGAAAG...ACTCAGAGTTGTGTGTGCAATGCACACCCAGACACACGCACGCACACACACGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR TCA 90 bp CCATTTAACACGAACCCAAGGCAGGTTGAGAGCGGAGATGTAAACATTTTCAACAGGGCATCTGGTAGATaGCACGCGCCTGGATGCCTT +
Preference number: 4 (lower is better)
Translates to: PFNTNPRQVESGDVNIFNRASGR*HAPGCL
Trigger: AAGGCATCCAGGCGCGTGTCATCTACCAGATGCCCT...GTTGAAAATGTTTACATCTCCGCTCTCAACCTGCCTTGGGTTCGTGTTAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp AAACACCTGCCCCACAAGTCGCCAAATGCTGCCTATCAAGGGCTTCTAAGTGCTCAAGTCGCCAAATGCTaGCTATCAAGGGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: KHLPHKSPNAAYQGLLSAQVAKC*LSRASK
Trigger: CTTAGAAGCCCTTGATAGGCAGCATTTGGCGACTTG...AGCACTTAGAAGCCCTTGATAGGCAGCATTTGGCGACTTGTGGGGCAGGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp GTGGACTTTACGGCTTTCTACATCCCCATGTGGGTTGAGGCTGCAACTGGTTTTCCAAATCAGAGACAGTaGAGCTCGTCTCGTCGGTAT +
Preference number: 4 (lower is better)
Translates to: VDFTAFYIPMWVEAATGFPNQRQ*SSSRRY
Trigger: ATACCGACGAGACGAGCTGCACTGTCTCTGATTTGG...AAAACCAGTTGCAGCCTCAACCCACATGGGGATGTAGAAAGCCGTAAAGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp CCATTTAACACGAACCCAAGGCAGGTTGAGAGCGGAGATGTAAACATTTTCAACGCAAAATACATGGCATaGGCCGGCCCTGCACCCATG +
Preference number: 4 (lower is better)
Translates to: PFNTNPRQVESGDVNIFNAKYMA*AGPAPM
Trigger: CATGGGTGCAGGGCCGGCCCATGCCATGTATTTTGC...GTTGAAAATGTTTACATCTCCGCTCTCAACCTGCCTTGGGTTCGTGTTAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp GCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCATACTCCCAGCTATCCCTCTGTTTCCTTGGTGGTaGAAAACGTCATTTAAAGTC +
Preference number: 4 (lower is better)
Translates to: AGFITASWSRVAILPAIPLFPWW*KTSFKV
Trigger: GACTTTAAATGACGTTTTCCACCACCAAGGAAACAG...AGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CCA 90 bp CGTGGAGCAGGGTGGCCATACTCCCAGCTATCCCTGCAAAACAAACTCCAGAAAAGGTGGCTGTTTCCTTaGTGGTGGAAAACGTCATTT +
Preference number: 4 (lower is better)
Translates to: RGAGWPYSQLSLQNKLQKRWLFP*WWKTSF
Trigger: AAATGACGTTTTCCACCACCAAGGAAACAGCCACCT...TTTCTGGAGTTTGTTTTGCAGGGATAGCTGGGAGTATGGCCACCCTGCTCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417331.6
CDS-3UTR CCA 90 bp CCATTTAACACGAACCCAAGGCAGGTTGAGAGCGGAGATGTAAACATTTTCAACGAGAGGGCAAGGGGCTaGATGCAGGCAGAGAATGAC +
Preference number: 4 (lower is better)
Translates to: PFNTNPRQVESGDVNIFNERARG*MQAEND
Trigger: GTCATTCTCTGCCTGCATCCAGCCCCTTGCCCTCTC...GTTGAAAATGTTTACATCTCCGCTCTCAACCTGCCTTGGGTTCGTGTTAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp AAACACCTGCCCCACAAGTCGCCAAATGCTGCCTATCAAGGGCTTCTAAGTGCTGTGGCATATCTTAAGTaGACCAAAAGGGGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: KHLPHKSPNAAYQGLLSAVAYLK*TKRGGR
Trigger: CCTACCACCCCTTTTGGTCCACTTAAGATATGCCAC...AGCACTTAGAAGCCCTTGATAGGCAGCATTTGGCGACTTGTGGGGCAGGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp CCCACACAAAAACACACAATTCTCCCCTTCTTCAAAGAGCTGGCAACAATTGAGGATGCAGCTGATTGCTaGCCGGTGCTGCGAGTTGTA +
Preference number: 4 (lower is better)
Translates to: PTQKHTILPFFKELATIEDAADC*PVLRVV
Trigger: TACAACTCGCAGCACCGGTCAGCAATCAGCTGCATC...CTCAATTGTTGCCAGCTCTTTGAAGAAGGGGAGAATTGTGTGTTTTTGTGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp TATGGAGCTCGATTTTCCAGCTGGCGCTTGGTGAGAAAGTACTTGAAGAACTCAAAAATGATCTACGTGTaGGGAGAGGGCAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: YGARFSSWRLVRKYLKNSKMIYV*GEGKGL
Trigger: CAGCCCCTTGCCCTCTCCTCACACGTAGATCATTTT...TGAGTTCTTCAAGTACTTTCTCACCAAGCGCCAGCTGGAAAATCGAGCTCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR GCA 90 bp CCATTTAACACGAACCCAAGGCAGGTTGAGAGCGGAGATGTAAACATTTTCAACAGGCTGGTCTCAAACTaGTGGCCTCAAGTGATCCGC +
Preference number: 4 (lower is better)
Translates to: PFNTNPRQVESGDVNIFNRLVSN*WPQVIR
Trigger: GCGGATCACTTGAGGCCAGCAGTTTGAGACCAGCCT...GTTGAAAATGTTTACATCTCCGCTCTCAACCTGCCTTGGGTTCGTGTTAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp GTGGACTTTACGGCTTTCTACATCCCCATGTGGGTTGAGGCTGCAACTGGTTTTAATAAGAAACCGGACTaGAGTCTGCGTGGAGCAACA +
Preference number: 4 (lower is better)
Translates to: VDFTAFYIPMWVEAATGFNKKPD*SLRGAT
Trigger: TGTTGCTCCACGCAGACTGCAGTCCGGTTTCTTATT...AAAACCAGTTGCAGCCTCAACCCACATGGGGATGTAGAAAGCCGTAAAGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp AAACACCTGCCCCACAAGTCGCCAAATGCTGCCTATCAAGGGCTTCTAAGTGCTTGCATGGTCCCAAGATaGAAATTCTCCACGTGTTAC +
Preference number: 4 (lower is better)
Translates to: KHLPHKSPNAAYQGLLSACMVPR*KFSTCY
Trigger: GTAACACGTGGAGAATTTCCATCTTGGGACCATGCA...AGCACTTAGAAGCCCTTGATAGGCAGCATTTGGCGACTTGTGGGGCAGGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp CCATTTAACACGAACCCAAGGCAGGTTGAGAGCGGAGATGTAAACATTTTCAACGGTGGGATAGTGGGGTaGGGAGGCCTCTTCCTATTT +
Preference number: 4 (lower is better)
Translates to: PFNTNPRQVESGDVNIFNGGIVG*GGLFLF
Trigger: AAATAGGAAGAGGCCTCCCCACCCCACTATCCCACC...GTTGAAAATGTTTACATCTCCGCTCTCAACCTGCCTTGGGTTCGTGTTAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp TTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCAGTACGAACCCAAGGCAGGTTaGGAGCGGAGATGTAAACAT +
Preference number: 4 (lower is better)
Translates to: LLTLETYIVRLAGRKQQYEPKAG*ERRCKH
Trigger: ATGTTTACATCTCCGCTCTCAACCTGCCTTGGGTTC...GTACTGCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp TTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCAGTACCAAAGACTGGAGACATaGTTCCCTAGACTGCACAGG +
Preference number: 4 (lower is better)
Translates to: LLTLETYIVRLAGRKQQYQRLET*FPRLHR
Trigger: CCTGTGCAGTCTAGGGAAGCATGTCTCCAGTCTTTG...GTACTGCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp GGCTGGATGCAGGCAGAGAATGACTTTAAGAAAAGATTCTATGATCCCTTCCTTGGAAGGGGATGTTCATaGTCAGCTGCGTGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: GWMQAENDFKKRFYDPFLGRGCS*SAAWCS
Trigger: GCTACACCACGCAGCTGACCATGAACATCCCCTTCC...AAGGAAGGGATCATAGAATCTTTTCTTAAAGTCATTCTCTGCCTGCATCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR CCA 90 bp AACACTTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCTTCTACATCCCCATGTaGGTTGAGGCTGCAACTGGT +
Preference number: 4 (lower is better)
Translates to: NTCSPLKHTLFVLQVGSSFYIPM*VEAATG
Trigger: ACCAGTTGCAGCCTCAACCCACATGGGGATGTAGAA...GCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp CCATTTAACACGAACCCAAGGCAGGTTGAGAGCGGAGATGTAAACATTTTCAACCAGGACCCGGCTCACTaGAATGCAAACATACATGAG +
Preference number: 4 (lower is better)
Translates to: PFNTNPRQVESGDVNIFNQDPAH*NANIHE
Trigger: CTCATGTATGTTTGCATTTCAGTGAGCCGGGTCCTG...GTTGAAAATGTTTACATCTCCGCTCTCAACCTGCCTTGGGTTCGTGTTAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp TTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCAGTACGCTCTTTCCCATCCCTaGTCTGAAAAAGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: LLTLETYIVRLAGRKQQYALSHP*SEKGTP
Trigger: TGGAGTTCCTTTTTCAGATCAGGGATGGGAAAGAGC...GTACTGCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp TGCTTCAGCGTGGCATATCTTAAGTGGACCAAAAGGGGTGGTAGGATAATTTTTGGGGCTAAACACAGCTaGCGGCCACATTCACTGATT +
Preference number: 4 (lower is better)
Translates to: CFSVAYLKWTKRGGRIIFGAKHS*RPHSLI
Trigger: AATCAGTGAATGTGGCCGGCAGCTGTGTTTAGCCCC...AAAAATTATCCTACCACCCCTTTTGGTCCACTTAAGATATGCCACGCTGAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp TTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCAGTACGTCTCAGCAGGTTTATaGCCAGTCACCCCAATTCTA +
Preference number: 4 (lower is better)
Translates to: LLTLETYIVRLAGRKQQYVSAGL*PVTPIL
Trigger: TAGAATTGGGGTGACTGGGCATAAACCTGCTGAGAC...GTACTGCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp CCCACACAAAAACACACAATTCTCCCCTTCTTCAAAGAGCTGGCAACAATTGAGCCACAAGTCGCCAAATaGTGCCTATCAAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PTQKHTILPFFKELATIEPQVAK*CLSRAS
Trigger: AGAAGCCCTTGATAGGCAGCATTTGGCGACTTGTGG...CTCAATTGTTGCCAGCTCTTTGAAGAAGGGGAGAATTGTGTGTTTTTGTGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp TTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCAGTACATGAAGTGGATGGACTaGAAGGGGATGTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: LLTLETYIVRLAGRKQQYMKWMD*KGMFMV
Trigger: GACCATGAACATCCCCTTCCAGTCCATCCACTTCAT...GTACTGCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp TTAACAAACACTTGTATCTGCTCAGTGCTTCACAACTTTCAAGGCTTTTCTCAAAGGGCTTCTAAGTGCTaGCCGGGGAAGGCAGGCATT +
Preference number: 4 (lower is better)
Translates to: LTNTCICSVLHNFQGFSQRASKC*PGKAGI
Trigger: AATGCCTGCCTTCCCCGGTCAGCACTTAGAAGCCCT...TTGAGAAAAGCCTTGAAAGTTGTGAAGCACTGAGCAGATACAAGTGTTTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp CCCACACAAAAACACACAATTCTCCCCTTCTTCAAAGAGCTGGCAACAATTGAGTTCCCATCCCTGATCTaGAAAAGGAACTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: PTQKHTILPFFKELATIEFPSLI*KRNSTD
Trigger: GTCAGTGGAGTTCCTTTTTCAGATCAGGGATGGGAA...CTCAATTGTTGCCAGCTCTTTGAAGAAGGGGAGAATTGTGTGTTTTTGTGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp GGACAAGACAGGGACAAAGACTGGAGACATGCTTCCCTAGACTGCACAGGGAAATTTTCTAAACACCAGTaGAAGCAAAATCCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: GQDRDKDWRHASLDCTGKFSKHQ*KQNPVG
Trigger: TCCTACTGGATTTTGCTTTCACTGGTGTTTAGAAAA...TTTCCCTGTGCAGTCTAGGGAAGCATGTCTCCAGTCTTTGTCCCTGTCTTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp CCCACACAAAAACACACAATTCTCCCCTTCTTCAAAGAGCTGGCAACAATTGAGTTTGCCTTTCCTTTTTaGCAGAGTCACTCTGTCGCC +
Preference number: 4 (lower is better)
Translates to: PTQKHTILPFFKELATIEFAFPF*QSHSVA
Trigger: GGCGACAGAGTGACTCTGTCAAAAAGGAAAGGCAAA...CTCAATTGTTGCCAGCTCTTTGAAGAAGGGGAGAATTGTGTGTTTTTGTGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp CCCACACAAAAACACACAATTCTCCCCTTCTTCAAAGAGCTGGCAACAATTGAGTCTGGACTCAAACTCTaGATTCGTGTCTTCACCGAG +
Preference number: 4 (lower is better)
Translates to: PTQKHTILPFFKELATIESGLKL*IRVFTE
Trigger: CTCGGTGAAGACACGAATGCAGAGTTTGAGTCCAGA...CTCAATTGTTGCCAGCTCTTTGAAGAAGGGGAGAATTGTGTGTTTTTGTGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp AACACTTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCAAGGCACTGTGTGCATaGTCCCAAGATGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: NTCSPLKHTLFVLQVGSSKALCA*SQDGNS
Trigger: AGAATTTCCATCTTGGGACCATGCACACAGTGCCTT...GCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR TCA 90 bp AACACTTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCACACTTGCTCACCCTTaGAACATACATTGTTCGTCT +
Preference number: 4 (lower is better)
Translates to: NTCSPLKHTLFVLQVGSSTLAHP*NIHCSS
Trigger: AGACGAACAATGTATGTTTCAAGGGTGAGCAAGTGT...GCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp TTAACACCATTTAACACGAACCCAAGGCAGGTTGAGAGCGGAGATGTAAACATTCTGCTTCACCACTTCTaGTGGATTCATTACCGCATC +
Preference number: 4 (lower is better)
Translates to: LTPFNTNPRQVESGDVNILLHHF*WIHYRI
Trigger: GATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCAG...AATGTTTACATCTCCGCTCTCAACCTGCCTTGGGTTCGTGTTAAATGGTGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp TGCTTCAGCGTGGCATATCTTAAGTGGACCAAAAGGGGTGGTAGGATAATTTTTTTTATCCCAAACACCTaGCCCACAAGTCGCCAAATG +
Preference number: 4 (lower is better)
Translates to: CFSVAYLKWTKRGGRIIFFIPNT*PTSRQM
Trigger: CATTTGGCGACTTGTGGGGCAGGTGTTTGGGATAAA...AAAAATTATCCTACCACCCCTTTTGGTCCACTTAAGATATGCCACGCTGAAGCA
44% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp CCATTTAACACGAACCCAAGGCAGGTTGAGAGCGGAGATGTAAACATTTTCAACTACCTTGCTTCAGCGTaGCATATCTTAAGTGGACCA +
Preference number: 4 (lower is better)
Translates to: PFNTNPRQVESGDVNIFNYLASA*HILSGP
Trigger: TGGTCCACTTAAGATATGCCACGCTGAAGCAAGGTA...GTTGAAAATGTTTACATCTCCGCTCTCAACCTGCCTTGGGTTCGTGTTAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp AACACTTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCTTGAACCTCAAATCATaGTTTGGACAGAAGAGCTAC +
Preference number: 4 (lower is better)
Translates to: NTCSPLKHTLFVLQVGSSLNLKS*FGQKSY
Trigger: GTAGCTCTTCTGTCCAAACCATGATTTGAGGTTCAA...GCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR GCA 90 bp CCCACACAAAAACACACAATTCTCCCCTTCTTCAAAGAGCTGGCAACAATTGAGGGCCTCTTCCTATTTTaGACTTTGCATTGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: PTQKHTILPFFKELATIEGLFLF*TLHCQS
Trigger: ACTTTGACAATGCAAAGTGCAAAATAGGAAGAGGCC...CTCAATTGTTGCCAGCTCTTTGAAGAAGGGGAGAATTGTGTGTTTTTGTGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CCA 90 bp TTAACAAACACTTGTATCTGCTCAGTGCTTCACAACTTTCAAGGCTTTTCTCAAGCTCGATTTTCCAGCTaGCGCTTGGTGAGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: LTNTCICSVLHNFQGFSQARFSS*RLVRKY
Trigger: GTACTTTCTCACCAAGCGCCAGCTGGAAAATCGAGC...TTGAGAAAAGCCTTGAAAGTTGTGAAGCACTGAGCAGATACAAGTGTTTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
3UTR CAA 72 bp ACACAATTCTCCCCTTCTTCAAAGAGCTGGCAACAATaGAGAGGCAGAAACAATAGTTACTACAGGCATTTG +
Preference number: 4 (lower is better)
Translates to: TQFSPSSKSWQQ*RGRNNSYYRHL
Trigger: CAAATGCCTGTAGTAACTATTGTTTCTGCCTCTCAATTGTTGCCAGCTCTTTGAAGAAGGGGAGAATTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS GCA 90 bp CCCCATCCATCCTCCGCGCCACCGCCTGGCTGCCCACGCTCCCGCTaGGCAGCTCCATCCGCCAGCTCGGCGGGGCGCAGGAGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PHPSSAPPPGCPRSR*AAPSASSAGRRRLQ
Trigger: CTGCAGCCTCCTGCGCCCCGCCGAGCTGGCGGATGGAGCTGCGCAGCGGGAGCGTGGGCAGCCAGGCGGTGGCGCGGAGGATGGATGGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290075.10
ENST00000417331.6
ENST00000518881.5
ENST00000519973.6
CDS GCA 90 bp CGCCATCTCGGCTGTCCCCATCCATCCTCCGCGCCACCGCCTGGCTaGCCACGCTCCCGCTGCGCAGCTCCATCCGCCAGCTCGGCGGGG +
Preference number: 5 (lower is better)
Translates to: RHLGCPHPSSAPPPG*PRSRCAAPSASSAG
Trigger: CCCCGCCGAGCTGGCGGATGGAGCTGCGCAGCGGGAGCGTGGGCAGCCAGGCGGTGGCGCGGAGGATGGATGGGGACAGCCGAGATGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290075.10
ENST00000417331.6
ENST00000518881.5
ENST00000519192.1
ENST00000519973.6
CDS-3UTR CAA 90 bp CGTGGTGTAGCTCCGGTAGAAGGCCCCCAACCCCTCGGTCCTCCACACCGTCCGGACCCGGTGGCGTCCTaGCCGCCGCCGCCATCTCGG +
Preference number: 5 (lower is better)
Translates to: RGVAPVEGPQPLGPPHRPDPVAS*PPPPSR
Trigger: CCGAGATGGCGGCGGCGGCAAGGACGCCACCGGGTC...CGGACGGTGTGGAGGACCGAGGGGTTGGGGGCCTTCTACCGGAGCTACACCACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CAA 90 bp CGTCCGGAAGGCATTGGCCATACCCGACAGCCGGCCGCTGATGTTGGCCAGCGAGACCCGGTGGCGTCCTaGCCGCCGCCGCCATCTCGG +
Preference number: 5 (lower is better)
Translates to: RPEGIGHTRQPAADVGQRDPVAS*PPPPSR
Trigger: CCGAGATGGCGGCGGCGGCAAGGACGCCACCGGGTC...TCGCTGGCCAACATCAGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS GCA 90 bp GAGGGGAGCACTGCGTATCAAGGACGTGCCGTGAGTCAGAGGCACTaGCCGCGGGTCCCGCTGCCCGGCAGGTCTGGCTGGCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: EGSTAYQGRAVSQRH*PRVPLPGRSGWPAS
Trigger: GGAAGCTGGCCAGCCAGACCTGCCGGGCAGCGGGACCCGCGGGCAGTGCCTCTGACTCACGGCACGTCCTTGATACGCAGTGCTCCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517923.1
ENST00000523883.5
CDS GCA 90 bp GGAGGGCAGAGAAAGTGGGGAGGGGAGCACTGCGTATCAAGGACGTaGCGTGAGTCAGAGGCACTGCCCGCGGGTCCCGCTGCCCGGCAG +
Preference number: 5 (lower is better)
Translates to: GGQRKWGGEHCVSRT*RESEALPAGPAARQ
Trigger: CTGCCGGGCAGCGGGACCCGCGGGCAGTGCCTCTGACTCACGGCACGTCCTTGATACGCAGTGCTCCCCTCCCCACTTTCTCTGCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517923.1
ENST00000523883.5
CDS TCA 90 bp GCAGAGAAAGTGGGGAGGGGAGCACTGCGTATCAAGGACGTGCCGTaGGTCAGAGGCACTGCCCGCGGGTCCCGCTGCCCGGCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: AEKVGRGALRIKDVP*VRGTARGSRCPAGL
Trigger: CAGACCTGCCGGGCAGCGGGACCCGCGGGCAGTGCCTCTGACTCACGGCACGTCCTTGATACGCAGTGCTCCCCTCCCCACTTTCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517923.1
ENST00000523883.5
CDS-3UTR CAA 90 bp TACACCGTCCGGAAGGCATTGGCCATACCCGACAGCCGGCCGCTGATGTTGGCCAGCCGGCCGCTGATGTaGGCCAGCGAGAGGGCCACG +
Preference number: 5 (lower is better)
Translates to: YTVRKALAIPDSRPLMLASRPLM*ASERAT
Trigger: CGTGGCCCTCTCGCTGGCCAACATCAGCGGCCGGCT...GGCCAACATCAGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGGTGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CAA 90 bp GATGTGGGACTGCGGGTTGTAGGTCCGGTGGGGGTTGACCTGCTCCTGCAGGAAAGCCGGCCGCTGATGTaGGCCAGCGAGAGGGCCACG +
Preference number: 5 (lower is better)
Translates to: DVGLRVVGPVGVDLLLQESRPLM*ASERAT
Trigger: CGTGGCCCTCTCGCTGGCCAACATCAGCGGCCGGCT...TTCCTGCAGGAGCAGGTCAACCCCCACCGGACCTACAACCCGCAGTCCCACATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CAA 90 bp TGGTGTAGCTCCGGTAGAAGGCCCCCAACCCCTCGGTCCTCCACACCGTCCGGACCCATGATCATGACGTaGACGCCTCGCAAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: WCSSGRRPPTPRSSTPSGPMIMT*TPRKGL
Trigger: GAGGCCCTTGCGAGGCGTCAACGTCATGATCATGGG...TCCGGACGGTGTGGAGGACCGAGGGGTTGGGGGCCTTCTACCGGAGCTACACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CAA 90 bp CCCTCGGTCCTCCACACCGTCCGGATGCAGCTGATTGCTGACCGGTGCTGCGAGGACCGGTGCTGCGAGTaGTACATCTGCAAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: PSVLHTVRMQLIADRCCEDRCCE*YICKRC
Trigger: GCAGCGCTTGCAGATGTACAACTCGCAGCACCGGTC...CTCGCAGCACCGGTCAGCAATCAGCTGCATCCGGACGGTGTGGAGGACCGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CAA 90 bp GAGCTGGTACACCGTCCGGAAGGCATTGGCCATACCCGACAGCCGGCCGCTGATCCCATGATCATGACGTaGACGCCTCGCAAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: ELVHRPEGIGHTRQPAADPMIMT*TPRKGL
Trigger: GAGGCCCTTGCGAGGCGTCAACGTCATGATCATGGG...ATCAGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGGTGTACCAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CAA 90 bp TACACCGTCCGGAAGGCATTGGCCATACCCGACAGCCGGCCGCTGATGTTGGCCGACCGGTGCTGCGAGTaGTACATCTGCAAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: YTVRKALAIPDSRPLMLADRCCE*YICKRC
Trigger: GCAGCGCTTGCAGATGTACAACTCGCAGCACCGGTC...GGCCAACATCAGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGGTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR CAA 90 bp CCCAAGTCCTTCCTGTCCACCACCACCTCGGATGTCCCCGCACACAGCCTTCCGGACCGGTGCTGCGAGTaGTACATCTGCAAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: PKSFLSTTTSDVPAHSLPDRCCE*YICKRC
Trigger: GCAGCGCTTGCAGATGTACAACTCGCAGCACCGGTC...CGGAAGGCTGTGTGCGGGGACATCCGAGGTGGTGGTGGACAGGAAGGACTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000519973.6
CDS-3UTR CAA 90 bp GCCTTTGAAGTAGCCGGCCAGGCCGTTGAGCTGGTACACCGTCCGGAAGGCATTACCGTCCGGAAGGCATaGGCCATACCCGACAGCCGG +
Preference number: 5 (lower is better)
Translates to: AFEVAGQAVELVHRPEGITVRKA*AIPDSR
Trigger: CCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGGT...AATGCCTTCCGGACGGTGTACCAGCTCAACGGCCTGGCCGGCTACTTCAAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CAA 90 bp GTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACCAAATGGCACAGCTAGGGACCGTCCGGAAGGCATaGGCCATACCCGACAGCCGG +
Preference number: 5 (lower is better)
Translates to: VGIPLHGSLAEHQMAQLGTVRKA*AIPDSR
Trigger: CCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGGT...CCCTAGCTGTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CAA 90 bp GCCGTTGAGCTGGTACACCGTCCGGAAGGCATTGGCCATACCCGACAGCCGGCCCCTCTCTCTAAGGCATaGGGGAGCAGAGGGCCCATA +
Preference number: 5 (lower is better)
Translates to: AVELVHRPEGIGHTRQPAPLSKA*GSRGPI
Trigger: TATGGGCCCTCTGCTCCCCAATGCCTTAGAGAGAGG...GGCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGGTGTACCAGCTCAACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR CAA 90 bp AAACACCTGCCCCACAAGTCGCCAAATGCTGCCTATCAAGGGCTTCTAAGTGCTGACCCGGTGGCGTCCTaGCCGCCGCCGCCATCTCGG +
Preference number: 5 (lower is better)
Translates to: KHLPHKSPNAAYQGLLSADPVAS*PPPPSR
Trigger: CCGAGATGGCGGCGGCGGCAAGGACGCCACCGGGTC...AGCACTTAGAAGCCCTTGATAGGCAGCATTTGGCGACTTGTGGGGCAGGTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CAA 90 bp CCCTCGGTCCTCCACACCGTCCGGATGCAGCTGATTGCTGACCGGTGCTGCGAGGGGCTCCGTAGATACTaGTGTACTGGGCTTTGGGAT +
Preference number: 5 (lower is better)
Translates to: PSVLHTVRMQLIADRCCEGLRRY*CTGLWD
Trigger: ATCCCAAAGCCCAGTACACAAGTATCTACGGAGCCC...CTCGCAGCACCGGTCAGCAATCAGCTGCATCCGGACGGTGTGGAGGACCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CAA 90 bp CGTCCGGAAGGCATTGGCCATACCCGACAGCCGGCCGCTGATGTTGGCCAGCGAGGGCTCCGTAGATACTaGTGTACTGGGCTTTGGGAT +
Preference number: 5 (lower is better)
Translates to: RPEGIGHTRQPAADVGQRGLRRY*CTGLWD
Trigger: ATCCCAAAGCCCAGTACACAAGTATCTACGGAGCCC...TCGCTGGCCAACATCAGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CAA 90 bp AAGTCCTTCCTGTCCACCACCACCTCGGATGTCCCCGCACACAGCCTTCCGGTGCTCCCAGCTATCCCGTaGGCTAGGTGGCTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: KSFLSTTTSDVPAHSLPVLPAIP*ARWLFP
Trigger: AGGAAACAGCCACCTAGCCAACGGGATAGCTGGGAG...CACCGGAAGGCTGTGTGCGGGGACATCCGAGGTGGTGGTGGACAGGAAGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CAA 90 bp CGGCACACACCATTTCAGAAAGCGAGGCTGCGAAGCCTGTGTTCTCGGGTGACGCCCATGATCATGACGTaGACGCCTCGCAAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: RHTPFQKARLRSLCSRVTPMIMT*TPRKGL
Trigger: GAGGCCCTTGCGAGGCGTCAACGTCATGATCATGGG...CGTCACCCGAGAACACAGGCTTCGCAGCCTCGCTTTCTGAAATGGTGTGTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CAA 90 bp AGAAATGGCGGTGGAGGGCATCTGGTAGATGACACGCGCCTGGATGCCTTTGAAACCGTCCGGAAGGCATaGGCCATACCCGACAGCCGG +
Preference number: 5 (lower is better)
Translates to: RNGGGGHLVDDTRLDAFETVRKA*AIPDSR
Trigger: CCGGCTGTCGGGTATGGCCAATGCCTTCCGGACGGT...TTCAAAGGCATCCAGGCGCGTGTCATCTACCAGATGCCCTCCACCGCCATTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CAA 90 bp CCTTTAGTATGGAGCTCGATTTTCCAGCTGGCGCTTGGTGAGAAAGTACTTGAAGACCCGGTGGCGTCCTaGCCGCCGCCGCCATCTCGG +
Preference number: 5 (lower is better)
Translates to: PLVWSSIFQLALGEKVLEDPVAS*PPPPSR
Trigger: CCGAGATGGCGGCGGCGGCAAGGACGCCACCGGGTC...TTCAAGTACTTTCTCACCAAGCGCCAGCTGGAAAATCGAGCTCCATACTAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CAA 90 bp GGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTCGGGCTCCGTAGATACTaGTGTACTGGGCTTTGGGAT +
Preference number: 5 (lower is better)
Translates to: GGACNQGPQSSRVRFLPFGLRRY*CTGLWD
Trigger: ATCCCAAAGCCCAGTACACAAGTATCTACGGAGCCC...GAAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CAA 90 bp GCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCATACTCCCAGCTATCCCTCCCATGATCATGACGTaGACGCCTCGCAAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: AGFITASWSRVAILPAIPPMIMT*TPRKGL
Trigger: GAGGCCCTTGCGAGGCGTCAACGTCATGATCATGGG...AGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CAA 90 bp CGTCCGGAAGGCATTGGCCATACCCGACAGCCGGCCGCTGATGTTGGCCAGCGATTTTCCAGCTGGCGCTaGGTGAGAAAGTACTTGAAG +
Preference number: 5 (lower is better)
Translates to: RPEGIGHTRQPAADVGQRFSSWR*VRKYLK
Trigger: CTTCAAGTACTTTCTCACCAAGCGCCAGCTGGAAAA...TCGCTGGCCAACATCAGCGGCCGGCTGTCGGGTATGGCCAATGCCTTCCGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CAA 90 bp GGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTCACATCCCCATGTGGGTaGAGGCTGCAACTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: GGACNQGPQSSRVRFLPFTSPCG*RLQLVL
Trigger: CAAAACCAGTTGCAGCCTCAACCCACATGGGGATGT...GAAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CAA 90 bp TCTTCCGACTCGGGCATGAGGGTCCAGGTCAGACCTCAGCCGCAGGGCCCTAGCCCAGTAGGAAATACCTaGCTTCAGCGTGGCATATCT +
Preference number: 5 (lower is better)
Translates to: SSDSGMRVQVRPQPQGPSPVGNT*LQRGIS
Trigger: AGATATGCCACGCTGAAGCAAGGTATTTCCTACTGG...GCTAGGGCCCTGCGGCTGAGGTCTGACCTGGACCCTCATGCCCGAGTCGGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CAA 90 bp CTGCGCCTCCTCGGTAAGATGCACCACGCTGACCGTGATGGGTGGCGGCAGGTCTCCAGGGTCCGGTTTTaGCCTTTCCTTTTTGACAGA +
Preference number: 5 (lower is better)
Translates to: LRLLGKMHHADRDGWRQVSRVRF*PFLFDR
Trigger: TCTGTCAAAAAGGAAAGGCAAAAACCGGACCCTGGA...GACCTGCCGCCACCCATCACGGTCAGCGTGGTGCATCTTACCGAGGAGGCGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS TCA 90 bp TGCAAGGCGCCCGCAAAACCCTCAAGATGGGCACCGTGGGGACCCTaGGACAAAGGCACTTGTGTGCGTTACCTCCTTCTCCTCTTAAGC +
Preference number: 5 (lower is better)
Translates to: CKAPAKPSRWAPWGP*DKGTCVRYLLLLLS
Trigger: GCTTAAGAGGAGAAGGAGGTAACGCACACAAGTGCCTTTGTCTCAGGGTCCCCACGGTGCCCATCTTGAGGGTTTTGCGGGCGCCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523883.5
CDS GCA 90 bp AACCTCTCTCTCCATGTTCTGCTTCTAAAGCCAGGCCTTAGGCAATaGAAGGCGCCCGCAAAACCCTCAAGATGGGCACCGTGGGGACCC +
Preference number: 5 (lower is better)
Translates to: NLSLHVLLLKPGLRQ*KAPAKPSRWAPWGP
Trigger: GGGTCCCCACGGTGCCCATCTTGAGGGTTTTGCGGGCGCCTTGCATTGCCTAAGGCCTGGCTTTAGAAGCAGAACATGGAGAGAGAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523883.5
CDS-3UTR CAA 90 bp GCGGGCCGAAGTCGAGGCGGCTGGGTCACAGGGAGGAACACCCTGGGGAGGGACCGTTGTAGAGACCTGTaGTACCAGTTTTTAAATAGT +
Preference number: 5 (lower is better)
Translates to: AGRSRGGWVTGRNTLGRDRCRDL*YQFLNS
Trigger: ACTATTTAAAAACTGGTACAACAGGTCTCTACAACG...GTCCCTCCCCAGGGTGTTCCTCCCTGTGACCCAGCCGCCTCGACTTCGGCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR CAA 90 bp AGAAATGGCGGTGGAGGGCATCTGGTAGATGACACGCGCCTGGATGCCTTTGAACTCCCAGCTATCCCGTaGGCTAGGTGGCTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: RNGGGGHLVDDTRLDAFELPAIP*ARWLFP
Trigger: AGGAAACAGCCACCTAGCCAACGGGATAGCTGGGAG...TTCAAAGGCATCCAGGCGCGTGTCATCTACCAGATGCCCTCCACCGCCATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523930.1
CDS-3UTR CAA 90 bp AGACCAAGAAATGGCGGTGGAGGGCATCTGGTAGATGACACGCGCCTGGATGCCCTTGTGTACTGGGCTTaGGGATCTGGACTCAAACTC +
Preference number: 5 (lower is better)
Translates to: RPRNGGGGHLVDDTRLDALVYWA*GSGLKL
Trigger: GAGTTTGAGTCCAGATCCCAAAGCCCAGTACACAAG...GGCATCCAGGCGCGTGTCATCTACCAGATGCCCTCCACCGCCATTTCTTGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000523930.1
CDS-3UTR CAA 90 bp GCTGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCAAAGTTCCTGGAACCGTaGGCTAGGTGGCTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: AASPLLLDSLPHRGAGWPKFLEP*ARWLFP
Trigger: AGGAAACAGCCACCTAGCCAACGGTTCCAGGAACTT...TGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417331.6
CDS CCA 90 bp CGTGTTGGCAGCATCTTCTTGCCTTTGAAAAGATGTCCCCACCTCTaGTCTGACTCCCTGGATCTGATCATCAGCCGGCCACTCAGCAAC +
Preference number: 5 (lower is better)
Translates to: RVGSIFLPLKRCPHL*SDSLDLIISRPLSN
Trigger: GTTGCTGAGTGGCCGGCTGATGATCAGATCCAGGGAGTCAGACCAGAGGTGGGGACATCTTTTCAAAGGCAAGAAGATGCTGCCAACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517923.1
CDS-3UTR CAA 90 bp ACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGCCATACTCCCAGGGCTCCGTAGATACTaGTGTACTGGGCTTTGGGAT +
Preference number: 5 (lower is better)
Translates to: TTSAGFITASWSRVAILPGLRRY*CTGLWD
Trigger: ATCCCAAAGCCCAGTACACAAGTATCTACGGAGCCC...TGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290075.10
ENST00000417331.6
CDS-3UTR CAA 90 bp GTCGGTATTCCCTTGCACGGCAGCCTGGCAGAGCACCAAATGGCACAGCTAGGGGCAACAATACCAACTTaGGAGATAAAGGCCAGATGG +
Preference number: 5 (lower is better)
Translates to: VGIPLHGSLAEHQMAQLGATIPT*EIKARW
Trigger: CCATCTGGCCTTTATCTCCAAAGTTGGTATTGTTGC...CCCTAGCTGTGCCATTTGGTGCTCTGCCAGGCTGCCGTGCAAGGGAATACCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CAA 90 bp GGAGGGGCCTGCAATCAGGGCCCACAGAGCTCCAGGGTCCGGTTTTTGCCTTTCAACACTTGCTCACCCTaGAAACATACATTGTTCGTC +
Preference number: 5 (lower is better)
Translates to: GGACNQGPQSSRVRFLPFNTCSP*KHTLFV
Trigger: GACGAACAATGTATGTTTCAAGGGTGAGCAAGTGTT...GAAAGGCAAAAACCGGACCCTGGAGCTCTGTGGGCCCTGATTGCAGGCCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CAA 90 bp AGCGCTGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTGGTTTTCCAGCTGGCGCTaGGTGAGAAAGTACTTGAAG +
Preference number: 5 (lower is better)
Translates to: SAASPLLLDSLPHRGAGWFSSWR*VRKYLK
Trigger: CTTCAAGTACTTTCTCACCAAGCGCCAGCTGGAAAA...CCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCAGCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS-3UTR CAA 90 bp CTGCGAAGCCTGTGTTCTCGGGTGACGCAGAGCAGACAAGGATGCAGAATGGCTTTTTCCAGCTGGCGCTaGGTGAGAAAGTACTTGAAG +
Preference number: 5 (lower is better)
Translates to: LRSLCSRVTQSRQGCRMAFSSWR*VRKYLK
Trigger: CTTCAAGTACTTTCTCACCAAGCGCCAGCTGGAAAA...AGCCATTCTGCATCCTTGTCTGCTCTGCGTCACCCGAGAACACAGGCTTCGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS TCA 90 bp GAGGCGGCTGGGTCACAGGGAGGAACACCCTGGGGAGGGACGTGTTaGAGAAGAGAACTTTCTAACTCCAGACAAACGCTTTCAAAATAC +
Preference number: 5 (lower is better)
Translates to: EAAGSQGGTPWGGTC*RRELSNSRQTLSKY
Trigger: GTATTTTGAAAGCGTTTGTCTGGAGTTAGAAAGTTCTCTTCTTCAACACGTCCCTCCCCAGGGTGTTCCTCCCTGTGACCCAGCCGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290075.10
ENST00000518881.5
ENST00000520654.1
ENST00000523883.5
CDS-3UTR CAA 90 bp CAAGCTCCGGTGAGGGCTCCAAATCAGAGACAGTGCAGCTCGTCTCGTCGGTATACCTCAAATCATGGTTaGGACAGAAGAGCTACTCAC +
Preference number: 5 (lower is better)
Translates to: QAPVRAPNQRQCSSSRRYTSNHG*DRRATH
Trigger: GTGAGTAGCTCTTCTGTCCAAACCATGATTTGAGGT...ATACCGACGAGACGAGCTGCACTGTCTCTGATTTGGAGCCCTCACCGGAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS TCA 90 bp GCACCCAGCCTCAGAATTAGCATTTCCAACACCCCTCAAGATGTCTaGTGCTGCTGGTCTGTAGAACACACTTTGAGTAGCTCCGAGCAC +
Preference number: 5 (lower is better)
Translates to: APSLRISISNTPQDV*CCWSVEHTLSSSEH
Trigger: GTGCTCGGAGCTACTCAAAGTGTGTTCTACAGACCAGCAGCATCAGACATCTTGAGGGGTGTTGGAAATGCTAATTCTGAGGCTGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520654.1
CDS-3UTR CAA 90 bp TTAACAAACACTTGTATCTGCTCAGTGCTTCACAACTTTCAAGGCTTTTCTCAAAGCCGGCCGCTGATGTaGGCCAGCGAGAGGGCCACG +
Preference number: 5 (lower is better)
Translates to: LTNTCICSVLHNFQGFSQSRPLM*ASERAT
Trigger: CGTGGCCCTCTCGCTGGCCAACATCAGCGGCCGGCT...TTGAGAAAAGCCTTGAAAGTTGTGAAGCACTGAGCAGATACAAGTGTTTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CAA 90 bp TGCTTCAGCGTGGCATATCTTAAGTGGACCAAAAGGGGTGGTAGGATAATTTTTCTCGTCGGTATTCCCTaGCACGGCAGCCTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: CFSVAYLKWTKRGGRIIFLVGIP*HGSLAE
Trigger: CTCTGCCAGGCTGCCGTGCAAGGGAATACCGACGAG...AAAAATTATCCTACCACCCCTTTTGGTCCACTTAAGATATGCCACGCTGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS GCA 90 bp TACTCCCAGCTATCCCTGCAAAACAAACTCCAGAAAATTACCCTCTaGGATCGGGTGTTCTCAGGAAGTTCCTGGAACCGTTGGCTAGGT +
Preference number: 5 (lower is better)
Translates to: YSQLSLQNKLQKITL*DRVFSGSSWNRWLG
Trigger: ACCTAGCCAACGGTTCCAGGAACTTCCTGAGAACACCCGATCGCAGAGGGTAATTTTCTGGAGTTTGTTTTGCAGGGATAGCTGGGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417331.6
CDS-3UTR CAA 90 bp CCCACACAAAAACACACAATTCTCCCCTTCTTCAAAGAGCTGGCAACAATTGAGCCTCTCTCTAAGGCATaGGGGAGCAGAGGGCCCATA +
Preference number: 5 (lower is better)
Translates to: PTQKHTILPFFKELATIEPLSKA*GSRGPI
Trigger: TATGGGCCCTCTGCTCCCCAATGCCTTAGAGAGAGG...CTCAATTGTTGCCAGCTCTTTGAAGAAGGGGAGAATTGTGTGTTTTTGTGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS GCA 90 bp CCGCCTCTCTCCCTCAAAACAACCAAACAAAATGATTTCAGCCCTTaGTTGCAGAGAGATGAGACTCAGACAAACAGAAGAGAATGGGGG +
Preference number: 5 (lower is better)
Translates to: PPLSLKTTKQNDFSP*LQRDETQTNRREWG
Trigger: CCCCCATTCTCTTCTGTTTGTCTGAGTCTCATCTCTCTGCAAGCAAGGGCTGAAATCATTTTGTTTGGTTGTTTTGAGGGAGAGAGGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518881.5
ENST00000520654.1
ENST00000523883.5
CDS-3UTR CAA 90 bp GGACAAGACAGGGACAAAGACTGGAGACATGCTTCCCTAGACTGCACAGGGAAATCTGGTCCTGGAATTTaGGGGAAAGACAAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: GQDRDKDWRHASLDCTGKSGPGI*GKDKGK
Trigger: TTTTCCTTTGTCTTTCCCCAAAATTCCAGGACCAGA...TTTCCCTGTGCAGTCTAGGGAAGCATGTCTCCAGTCTTTGTCCCTGTCTTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CAA 90 bp GTGGACTTTACGGCTTTCTACATCCCCATGTGGGTTGAGGCTGCAACTGGTTTTCCCTTGAAACATACATaGTTCGTCTTGCAGGTAGGA +
Preference number: 5 (lower is better)
Translates to: VDFTAFYIPMWVEAATGFPLKHT*FVLQVG
Trigger: TCCTACCTGCAAGACGAACAATGTATGTTTCAAGGG...AAAACCAGTTGCAGCCTCAACCCACATGGGGATGTAGAAAGCCGTAAAGTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CAA 90 bp CCTTTAGTATGGAGCTCGATTTTCCAGCTGGCGCTTGGTGAGAAAGTACTTGAAGCTTTCAAAATACCGTaGGCTAGGTGGCTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: PLVWSSIFQLALGEKVLEAFKIP*ARWLFP
Trigger: AGGAAACAGCCACCTAGCCAACGGTATTTTGAAAGC...TTCAAGTACTTTCTCACCAAGCGCCAGCTGGAAAATCGAGCTCCATACTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290075.10
CDS GCA 90 bp TCCCAGCAAGATCACCACAGCATACACCACATATTGCAGAAACAGTaGAGGGCAGCACTTGGCATAAAATGGATTCCGTCAAATCTCTTT +
Preference number: 5 (lower is better)
Translates to: SQQDHHSIHHILQKQ*RAALGIKWIPSNLF
Trigger: AAAGAGATTTGACGGAATCCATTTTATGCCAAGTGCTGCCCTGCACTGTTTCTGCAATATGTGGTGTATGCTGTGGTGATCTTGCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518881.5
ENST00000520654.1
ENST00000523883.5
CDS-3UTR CAA 90 bp AACACTTGCTCACCCTTGAAACATACATTGTTCGTCTTGCAGGTAGGAAGCAGCTTTTGCCTTTCCTTTTaGACAGAGTCACTCTGTCGC +
Preference number: 5 (lower is better)
Translates to: NTCSPLKHTLFVLQVGSSFCLSF*TESLCR
Trigger: GCGACAGAGTGACTCTGTCAAAAAGGAAAGGCAAAA...GCTGCTTCCTACCTGCAAGACGAACAATGTATGTTTCAAGGGTGAGCAAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS-3UTR CAA 90 bp TGCTTCAGCGTGGCATATCTTAAGTGGACCAAAAGGGGTGGTAGGATAATTTTTGAAGCAGCAGTACATTaGTCATTCAAAGACACAATC +
Preference number: 5 (lower is better)
Translates to: CFSVAYLKWTKRGGRIIFEAAVH*SFKDTI
Trigger: GATTGTGTCTTTGAATGACAAATGTACTGCTGCTTC...AAAAATTATCCTACCACCCCTTTTGGTCCACTTAAGATATGCCACGCTGAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS GCA 72 bp TCCTCCGCGCCACCGCCTGGCTGCCCACGCTCCCGCTaGGCAGCTCCATCCGCCAGCTCGGCGGGGCGCAGG +
Preference number: 6 (lower is better)
Translates to: SSAPPPGCPRSR*AAPSASSAGRR
Trigger: CCTGCGCCCCGCCGAGCTGGCGGATGGAGCTGCGCAGCGGGAGCGTGGGCAGCCAGGCGGTGGCGCGGAGGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290075.10
ENST00000417331.6
ENST00000518881.5
ENST00000519192.1
ENST00000519973.6
CDS CCA 72 bp TCTCGGCTGTCCCCATCCATCCTCCGCGCCACCGCCTaGCTGCCCACGCTCCCGCTGCGCAGCTCCATCCGC +
Preference number: 6 (lower is better)
Translates to: SRLSPSILRATA*LPTLPLRSSIR
Trigger: GCGGATGGAGCTGCGCAGCGGGAGCGTGGGCAGCCAGGCGGTGGCGCGGAGGATGGATGGGGACAGCCGAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290075.10
ENST00000417331.6
ENST00000518881.5
ENST00000519192.1
ENST00000519973.6
CDS TCA 72 bp GTGGGGAGGGGAGCACTGCGTATCAAGGACGTGCCGTaGGTCAGAGGCACTGCCCGCGGGTCCCGCTGCCCG +
Preference number: 6 (lower is better)
Translates to: VGRGALRIKDVP*VRGTARGSRCP
Trigger: CGGGCAGCGGGACCCGCGGGCAGTGCCTCTGACTCACGGCACGTCCTTGATACGCAGTGCTCCCCTCCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517923.1
ENST00000523883.5
CDS CCA 72 bp CACTGCCCGCGGGTCCCGCTGCCCGGCAGGTCTGGCTaGCCAGCTTCCTGCAGGCTGCAAACCTCTCTCTCC +
Preference number: 6 (lower is better)
Translates to: HCPRVPLPGRSG*PASCRLQTSLS
Trigger: GGAGAGAGAGGTTTGCAGCCTGCAGGAAGCTGGCCAGCCAGACCTGCCGGGCAGCGGGACCCGCGGGCAGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517923.1
ENST00000523883.5
CDS CCA 72 bp GAGGCACTGCCCGCGGGTCCCGCTGCCCGGCAGGTCTaGCTGGCCAGCTTCCTGCAGGCTGCAAACCTCTCT +
Preference number: 6 (lower is better)
Translates to: EALPAGPAARQV*LASFLQAANLS
Trigger: AGAGAGGTTTGCAGCCTGCAGGAAGCTGGCCAGCCAGACCTGCCGGGCAGCGGGACCCGCGGGCAGTGCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517923.1
ENST00000523883.5
CDS GCA 72 bp GCAGGTTCTCGTAGTCCTCCGACCCGGTGGCGTCCTTaGCGCCGCCGCCATCTCGGCTGTCCCCATCCATCC +
Preference number: 6 (lower is better)
Translates to: AGSRSPPTRWRP*RRRHLGCPHPS
Trigger: GGATGGATGGGGACAGCCGAGATGGCGGCGGCGGCAAGGACGCCACCGGGTCGGAGGACTACGAGAACCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290075.10
ENST00000417331.6
ENST00000518881.5
ENST00000519192.1
ENST00000519973.6
CDS GCA 72 bp AGAAAGTGGGGAGGGGAGCACTGCGTATCAAGGACGTaGCGTGAGTCAGAGGCACTGCCCGCGGGTCCCGCT +
Preference number: 6 (lower is better)
Translates to: RKWGGEHCVSRT*RESEALPAGPA
Trigger: AGCGGGACCCGCGGGCAGTGCCTCTGACTCACGGCACGTCCTTGATACGCAGTGCTCCCCTCCCCACTTTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517923.1
ENST00000523883.5
CDS CAA 72 bp ATGGCATGGGCCGGCCCTGCACCCATGATCATGACGTaGACGCCTCGCAAGGGCCTCCAGAAGCCTTCGGTC +
Preference number: 6 (lower is better)
Translates to: MAWAGPAPMIMT*TPRKGLQKPSV
Trigger: GACCGAAGGCTTCTGGAGGCCCTTGCGAGGCGTCAACGTCATGATCATGGGTGCAGGGCCGGCCCATGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000290075.10
ENST00000417331.6
ENST00000517923.1
ENST00000518881.5
ENST00000519973.6
ENST00000520654.1
ENST00000520949.1
ENST00000523883.5
ENST00000523930.1
CDS TCA 72 bp AGGGTCAGTCTGCAAAGCGACGGGACTGACCCCATCTaGGAGTCGGGTCAGGCCTGGCTTCAAGAACCAGGA +
Preference number: 6 (lower is better)
Translates to: RVSLQSDGTDPI*ESGQAWLQEPG
Trigger: TCCTGGTTCTTGAAGCCAGGCCTGACCCGACTCTCAGATGGGGTCAGTCCCGTCGCTTTGCAGACTGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518881.5
ENST00000520654.1
ENST00000523883.5
CDS CAA 90 bp GCAAAATACATGGCATGGGCCGGCCCTGCACCCATGATCATGACGTaGACGCCTCGCAAGGGCCTCCAGAAGCCTTCGGTCCGCATGATT +
Preference number: 6 (lower is better)
Translates to: AKYMAWAGPAPMIMT*TPRKGLQKPSVRMI
Trigger: AATCATGCGGACCGAAGGCTTCTGGAGGCCCTTGCGAGGCGTCAACGTCATGATCATGGGTGCAGGGCCGGCCCATGCCATGTATTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000290075.10
ENST00000417331.6
ENST00000517923.1
ENST00000518881.5
ENST00000519973.6
ENST00000520654.1
ENST00000520949.1
ENST00000523883.5
ENST00000523930.1
CDS TCA 72 bp CCCGCAAAACCCTCAAGATGGGCACCGTGGGGACCCTaGGACAAAGGCACTTGTGTGCGTTACCTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: PAKPSRWAPWGP*DKGTCVRYLLL
Trigger: GAGAAGGAGGTAACGCACACAAGTGCCTTTGTCTCAGGGTCCCCACGGTGCCCATCTTGAGGGTTTTGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523883.5
CDS CCA 72 bp CTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTaGCCATACTCCCAGCTATCCCGTTGGCTAGGTGGC +
Preference number: 6 (lower is better)
Translates to: LLLDSLPHRGAG*PYSQLSRWLGG
Trigger: GCCACCTAGCCAACGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519973.6
ENST00000523930.1
CDS GCA 72 bp CTCCATGTTCTGCTTCTAAAGCCAGGCCTTAGGCAATaGAAGGCGCCCGCAAAACCCTCAAGATGGGCACCG +
Preference number: 6 (lower is better)
Translates to: LHVLLLKPGLRQ*KAPAKPSRWAP
Trigger: CGGTGCCCATCTTGAGGGTTTTGCGGGCGCCTTGCATTGCCTAAGGCCTGGCTTTAGAAGCAGAACATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523883.5
CDS CCA 72 bp TGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTaGAGCAGGGTGGCCATACTCCCAGCTATCCCGTTG +
Preference number: 6 (lower is better)
Translates to: CFTTSAGFITAS*SRVAILPAIPL
Trigger: CAACGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519973.6
CDS CAA 90 bp TCCAGCCTAGGCGACAAGGCAAGACCCTGTCTTGGCAGCATCTTCTaGCCTTTGAAAAGATGTCCCCACCTCTGGTCTGACTCCCTGGAT +
Preference number: 6 (lower is better)
Translates to: SSLGDKARPCLGSIF*PLKRCPHLWSDSLD
Trigger: ATCCAGGGAGTCAGACCAGAGGTGGGGACATCTTTTCAAAGGCAAGAAGATGCTGCCAAGACAGGGTCTTGCCTTGTCGCCTAGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523883.5
CDS CCA 72 bp CTTCTGCTGGATTCATTACCGCATCGTGGAGCAGGGTaGCCATACTCCCAGCTATCCTTGCAGAGAGATGAG +
Preference number: 6 (lower is better)
Translates to: LLLDSLPHRGAG*PYSQLSLQRDE
Trigger: CTCATCTCTCTGCAAGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522164.5
CDS CCA 72 bp TGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTaGAGCAGGGTGGCCATACTCCCAGCTATCCTTGCA +
Preference number: 6 (lower is better)
Translates to: CFTTSAGFITAS*SRVAILPAILA
Trigger: TGCAAGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522164.5
CDS CCA 72 bp CAAGACCCTGTCTCTTTGAAAAGATGTCCCCACCTCTaGTCTGACTCCCTGGATCTGATCATCAGCCGGCCA +
Preference number: 6 (lower is better)
Translates to: QDPVSLKRCPHL*SDSLDLIISRP
Trigger: TGGCCGGCTGATGATCAGATCCAGGGAGTCAGACCAGAGGTGGGGACATCTTTTCAAAGAGACAGGGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520949.1
CDS CCA 72 bp TGCTTCACCACTTCTGCTGGATTCATTACCGCATCGTaGAGCAGGGTGGCCATACTCCCAGCTATCCCAAAC +
Preference number: 6 (lower is better)
Translates to: CFTTSAGFITAS*SRVAILPAIPN
Trigger: GTTTGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGTGGTGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521637.1
CDS CAA 72 bp GGCGACAAGGCAAGACCCTGTCTTGGCAGCATCTTCTaGCCTTTGAAAAGATGTCCCCACCTCTGGTCTGAC +
Preference number: 6 (lower is better)
Translates to: GDKARPCLGSIF*PLKRCPHLWSD
Trigger: GTCAGACCAGAGGTGGGGACATCTTTTCAAAGGCAAGAAGATGCTGCCAAGACAGGGTCTTGCCTTGTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523883.5
CDS TCA 72 bp CCTTTGCACATCCCCTACTGCCCCTCCCTGGGACCATaGAACATTACCTTCTGCTGGATTCATTACCGCATC +
Preference number: 6 (lower is better)
Translates to: PLHIPYCPSLGP*NITFCWIHYRI
Trigger: GATGCGGTAATGAATCCAGCAGAAGGTAATGTTTCATGGTCCCAGGGAGGGGCAGTAGGGGATGTGCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520654.1
CDS CCA 72 bp AGCATCTTCTTGCCTTTGAAAAGATGTCCCCACCTCTaGTCTGACTCCCTGGATCTGATCATCAGCCGGCCA +
Preference number: 6 (lower is better)
Translates to: SIFLPLKRCPHL*SDSLDLIISRP
Trigger: TGGCCGGCTGATGATCAGATCCAGGGAGTCAGACCAGAGGTGGGGACATCTTTTCAAAGGCAAGAAGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517923.1
ENST00000523883.5
CDS CCA 72 bp GAAACATTACCTTCTGCTGGATTCATTACCGCATCGTaGAGCAGGGTGGCCATACTCCCAGCTATCCCTGCA +
Preference number: 6 (lower is better)
Translates to: ETLPSAGFITAS*SRVAILPAIPA
Trigger: TGCAGGGATAGCTGGGAGTATGGCCACCCTGCTCCACGATGCGGTAATGAATCCAGCAGAAGGTAATGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520654.1
CDS GCA 72 bp CTTGTGTACTGGGCTTTGGGATCTGGACTCAAACTCTaGATTCGTGTCTGTAATCCCAGCTACTCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: LVYWALGSGLKL*IRVCNPSYSGG
Trigger: GCCTCCTGAGTAGCTGGGATTACAGACACGAATGCAGAGTTTGAGTCCAGATCCCAAAGCCCAGTACACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520949.1
ENST00000523883.5
CDS CCA 72 bp GGCTCCGTAGATACTTGTGTACTGGGCTTTGGGATCTaGACTCAAACTCTGCATTCGTGTCTTCACCGAGTC +
Preference number: 6 (lower is better)
Translates to: GSVDTCVLGFGI*TQTLHSCLHRV
Trigger: GACTCGGTGAAGACACGAATGCAGAGTTTGAGTCCAGATCCCAAAGCCCAGTACACAAGTATCTACGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290075.10
ENST00000417331.6
ENST00000518881.5
ENST00000519973.6
ENST00000520654.1
ENST00000523930.1
CDS CCA 72 bp GGCTCCGTAGATACTTGTGTACTGGGCTTTGGGATCTaGACTCAAACTCTGCATTCGTGTTGGCAGCATCTT +
Preference number: 6 (lower is better)
Translates to: GSVDTCVLGFGI*TQTLHSCWQHL
Trigger: AAGATGCTGCCAACACGAATGCAGAGTTTGAGTCCAGATCCCAAAGCCCAGTACACAAGTATCTACGGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517923.1
CDS CCA 72 bp ATTACCCTCTGCGATCGGGTGTTCTCAGGAAGTTCCTaGAACCTAAAATCAGACGGAACCCAGGACTTAGCT +
Preference number: 6 (lower is better)
Translates to: ITLCDRVFSGSS*NLKSDGTQDLA
Trigger: AGCTAAGTCCTGGGTTCCGTCTGATTTTAGGTTCCAGGAACTTCCTGAGAACACCCGATCGCAGAGGGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518881.5
ENST00000520654.1
ENST00000523883.5
CDS GCA 72 bp CTATCCCTGCAAAACAAACTCCAGAAAATTACCCTCTaGGATCGGGTGTTCTCAGGAAGTTCCTGGAACCGT +
Preference number: 6 (lower is better)
Translates to: LSLQNKLQKITL*DRVFSGSSWNR
Trigger: ACGGTTCCAGGAACTTCCTGAGAACACCCGATCGCAGAGGGTAATTTTCTGGAGTTTGTTTTGCAGGGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417331.6
CDS CCA 72 bp CTCCCAGCTATCCCGTTGGCTAGGTGGCTGTTTCCTTaGTGGTGGAAAACGTCATTTAAAGTCCTTTTCATG +
Preference number: 6 (lower is better)
Translates to: LPAIPLARWLFP*WWKTSFKVLFM
Trigger: CATGAAAAGGACTTTAAATGACGTTTTCCACCACCAAGGAAACAGCCACCTAGCCAACGGGATAGCTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519973.6
ENST00000523930.1
CDS TCA 72 bp TACACATTAACTCACTTTGCCCTTAAGCTGGGGCCCTaGAAGGAGATATCATATCTACAGCTGAGAAGGGGG +
Preference number: 6 (lower is better)
Translates to: YTLTHFALKLGP*KEISYLQLRRG
Trigger: CCCCCTTCTCAGCTGTAGATATGATATCTCCTTTCAGGGCCCCAGCTTAAGGGCAAAGTGAGTTAATGTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518881.5
ENST00000520654.1
ENST00000523883.5
CDS GCA 72 bp GATCACCACAGCATACACCACATATTGCAGAAACAGTaGAGGGCAGCACTTGGCATAAAATGGATTCCGTCA +
Preference number: 6 (lower is better)
Translates to: DHHSIHHILQKQ*RAALGIKWIPS
Trigger: TGACGGAATCCATTTTATGCCAAGTGCTGCCCTGCACTGTTTCTGCAATATGTGGTGTATGCTGTGGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518881.5
ENST00000520654.1
ENST00000523883.5
CDS GCA 72 bp CTATCCCTGCAAAACAAACTCCAGAAAATTACCCTCTaGGATCGGGTGTTCTCAGGAAGTTCCTGGAACCTA +
Preference number: 6 (lower is better)
Translates to: LSLQNKLQKITL*DRVFSGSSWNL
Trigger: TAGGTTCCAGGAACTTCCTGAGAACACCCGATCGCAGAGGGTAATTTTCTGGAGTTTGTTTTGCAGGGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518881.5
ENST00000520654.1
ENST00000523883.5
CDS CCA 72 bp AAGTTCCTGGAACCGTTGGCTAGGTGGCTGTTTCCTTaGTGGTGGAAAACGTCATTTAAAGTCCTTTTCATG +
Preference number: 6 (lower is better)
Translates to: KFLEPLARWLFP*WWKTSFKVLFM
Trigger: CATGAAAAGGACTTTAAATGACGTTTTCCACCACCAAGGAAACAGCCACCTAGCCAACGGTTCCAGGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417331.6
CDS CCA 72 bp TCAAGAACCAGGAACCTCAAAAGCCAGAATCAGGCCTaGAATTTTGCTTTCGGCTTTGAGTTTCCTCCCTTT +
Preference number: 6 (lower is better)
Translates to: SRTRNLKSQNQA*NFAFGFEFPPF
Trigger: AAAGGGAGGAAACTCAAAGCCGAAAGCAAAATTCCAGGCCTGATTCTGGCTTTTGAGGTTCCTGGTTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518881.5
ENST00000520654.1
ENST00000523883.5
CDS CCA 72 bp CCAGCTATCCCGTTGGCTAGGTGGCTGTTTCCTTGGTaGTGGAAAACGTCATTTAAAGTCCTTTTCATGTTT +
Preference number: 6 (lower is better)
Translates to: PAIPLARWLFPW*WKTSFKVLFMF
Trigger: AAACATGAAAAGGACTTTAAATGACGTTTTCCACCACCAAGGAAACAGCCACCTAGCCAACGGGATAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519973.6
ENST00000523930.1
CDS CCA 72 bp TTCCTGGAACCGTTGGCTAGGTGGCTGTTTCCTTGGTaGTGGAAAACGTCATTTAAAGTCCTTTTCATGTTT +
Preference number: 6 (lower is better)
Translates to: FLEPLARWLFPW*WKTSFKVLFMF
Trigger: AAACATGAAAAGGACTTTAAATGACGTTTTCCACCACCAAGGAAACAGCCACCTAGCCAACGGTTCCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417331.6
CDS CCA 72 bp ACACCACATATTGCAGAAACAGTGCAGGGCAGCACTTaGCATAAAATGGATTCCGTCAAATCTCTTTCAAGG +
Preference number: 6 (lower is better)
Translates to: TPHIAETVQGST*HKMDSVKSLSR
Trigger: CCTTGAAAGAGATTTGACGGAATCCATTTTATGCCAAGTGCTGCCCTGCACTGTTTCTGCAATATGTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518881.5
ENST00000520654.1
ENST00000523883.5