RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC25A36 (Homo sapiens)

Ensembl gene IDs: ENSG00000114120

Ensembl transcript IDs: ENST00000324194.12, ENST00000393015.8, ENST00000446041.6, ENST00000453248.6, ENST00000502594.5, ENST00000502756.1, ENST00000502866.1, ENST00000507429.5, ENST00000511757.1, ENST00000512023.5, ENST00000512506.5, ENST00000513887.5, ENST00000515813.1, ENST00000631654.1, ENST00000648615.1

Found 484 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AACAGGGCACTATGTTTCACTGGTGACAGCAGAGAAAGCTTGCAATaGCACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTAC +
Preference number: 1 (lower is better)
Translates to: NRALCFTGDSRESLQ*HAAIFYNVGGTTGY
Trigger: GTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTCATTGCAAGCTTTCTCTGCTGTCACCAGTGAAACATAGTGCCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR TCA 90 bp CTTCACAAGGCAAATGGCACTGTATTAGGCAGTAGAAATGGCACCTaGAAAGGCAAACACGATAGATTCAGACCTTCTCTACAGATTTGT +
Preference number: 1 (lower is better)
Translates to: LHKANGTVLGSRNGT*KGKHDRFRPSLQIC
Trigger: ACAAATCTGTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGCCTAATACAGTGCCATTTGCCTTGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR TCA 90 bp AGATCAGTAAGACTAGGGAGAGTCTCTATCTTACATTCAACACAATaGATGTTTATGGGTCTTCACAAGGCAAATGGCACTGTATTAGGC +
Preference number: 1 (lower is better)
Translates to: RSVRLGRVSILHSTQ*MFMGLHKANGTVLG
Trigger: GCCTAATACAGTGCCATTTGCCTTGTGAAGACCCATAAACATTCATTGTGTTGAATGTAAGATAGAGACTCTCCCTAGTCTTACTGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR CCA 90 bp CAAGATTTCTTTGTACACTATGAGGGAGTTGGATTACTTGACCTTTaGGTTCCTTCAGACATCACTAGATCTAACAGATACAAAGTGCTC +
Preference number: 1 (lower is better)
Translates to: QDFFVHYEGVGLLDL*VPSDITRSNRYKVL
Trigger: GAGCACTTTGTATCTGTTAGATCTAGTGATGTCTGAAGGAACCCAAAGGTCAAGTAATCCAACTCCCTCATAGTGTACAAAGAAATCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR GCA 90 bp GGAGAATTTTCAATGGAAAATCAAAGTTCGTGGCTTTGTCTAACATaGATAGCAGCAAATGATTCCAGAACCAGATTGGTCAAACCAACT +
Preference number: 1 (lower is better)
Translates to: GEFSMENQSSWLCLT*IAANDSRTRLVKPT
Trigger: AGTTGGTTTGACCAATCTGGTTCTGGAATCATTTGCTGCTATGCATGTTAGACAAAGCCACGAACTTTGATTTTCCATTGAAAATTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507429.5
3UTR CCA 90 bp AGATGTTCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTTGTaGGGTACTGAGATCAGTAAGACTAGGGAGAGTCTCTATCTTACA +
Preference number: 1 (lower is better)
Translates to: RCSLAAGFHIILNHL*GTEISKTRESLYLT
Trigger: TGTAAGATAGAGACTCTCCCTAGTCTTACTGATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGAACATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR CCA 90 bp CTAATGATATTCTATCCTGACTTCAAAGTTACAAATTCACTGTGGTaGACCCATCTAGAAAGGATGGTTCTACAAAGTTACATAATGAGA +
Preference number: 1 (lower is better)
Translates to: LMIFYPDFKVTNSLW*THLERMVLQSYIMR
Trigger: TCTCATTATGTAACTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTGAAGTCAGGATAGAATATCATTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR TCA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCTCAGGTATACTGAAATaGGTACCACACCGGCGTCCA +
Preference number: 2 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTSGILK*VPHRRP
Trigger: TGGACGCCGGTGTGGTACTCATTTCAGTATACCTGA...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CCA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCTTCTGTCTGCCATGCTaGCTTCTGTATCCCATGGTC +
Preference number: 2 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTFCLPC*LLYPMV
Trigger: GACCATGGGATACAGAAGCCAGCATGGCAGACAGAA...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR GCA 90 bp AACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGGTTGGTTGCTGTGATTaGAGTAAAACGAGGTTTAAG +
Preference number: 2 (lower is better)
Translates to: NTFKSTHSPFPAVPCIKLVGCCD*SKTRFK
Trigger: CTTAAACCTCGTTTTACTGCAATCACAGCAACCAAC...CAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000512506.5
3UTR-3UTR CCA 90 bp TACCTGCTAAAGCAGACAGCAAGGGGGCCCTTGTCTATAATATTTATACTGTCCTTCTGTCTGCCATGCTaGCTTCTGTATCCCATGGTC +
Preference number: 2 (lower is better)
Translates to: YLLKQTARGPLSIIFILSFCLPC*LLYPMV
Trigger: GACCATGGGATACAGAAGCCAGCATGGCAGACAGAA...GGACAGTATAAATATTATAGACAAGGGCCCCCTTGCTGTCTGCTTTAGCAGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CCA 90 bp CGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAATCACCTTTTGCACTATaGCCAGTAATATTGCACATC +
Preference number: 2 (lower is better)
Translates to: RLSPRFLASSCNRVFISQSPFAL*PVILHI
Trigger: GATGTGCAATATTACTGGCCATAGTGCAAAAGGTGA...TTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512023.5
3UTR-3UTR TCA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACACATGCCGCAGTCAGTaGAAAAGCCGAGAAATCAAC +
Preference number: 2 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYTCRSQ*KSREIN
Trigger: GTTGATTTCTCGGCTTTTTCACTGACTGCGGCATGT...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR TCA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACACAGTTCAGGTATACTaGAATGAGTACCACACCGGC +
Preference number: 2 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYTVQVY*NEYHTG
Trigger: GCCGGTGTGGTACTCATTTCAGTATACCTGAACTGT...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR GCA 90 bp TCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGAAAAAACACCGGCGTCCAATTaGGGCAGTTTTTATACACCA +
Preference number: 2 (lower is better)
Translates to: SCTTKSEKTRGHAAVSEKTPASN*GSFYTP
Trigger: TGGTGTATAAAAACTGCCGCAATTGGACGCCGGTGT...TTTTTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR GCA 90 bp CTTTACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATGTTGGTTGCTGTGATTaGAGTAAAACCTTTCACCTT +
Preference number: 2 (lower is better)
Translates to: LYEHIQKHPFAFPRGSLHVGCCD*SKTFHL
Trigger: AAGGTGAAAGGTTTTACTGCAATCACAGCAACCAAC...ATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512023.5
3UTR-3UTR CCA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCGGCTTCTGTATCCCATaGTCCACTGTAATCTTTTGG +
Preference number: 2 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTGFCIP*STVIFW
Trigger: CCAAAAGATTACAGTGGACCATGGGATACAGAAGCC...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR GCA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCAAAAAGGCCACAAAGTaGTTTCACGAAGCGTCATTC +
Preference number: 2 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTKKATK*FHEASF
Trigger: GAATGACGCTTCGTGAAAGCACTTTGTGGCCTTTTT...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CCA 90 bp CAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTTCTGGCTTCTGTATCCCATaGTCCACTGTAATCTTTTGG +
Preference number: 2 (lower is better)
Translates to: QVFEVAAASIIPTKSDASGFCIP*STVIFW
Trigger: CCAAAAGATTACAGTGGACCATGGGATACAGAAGCC...AGAAGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648615.1
3UTR-3UTR TCA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGACATGCCGCAGTCAGTaGAAAAGCCGAGAAATCAAC +
Preference number: 2 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKTCRSQ*KSREIN
Trigger: GTTGATTTCTCGGCTTTTTCACTGACTGCGGCATGT...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR TCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACACAGTTCAGGTATACTaGAATGAGTACCACACCGGC +
Preference number: 2 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNTVQVY*NEYHTG
Trigger: GCCGGTGTGGTACTCATTTCAGTATACCTGAACTGT...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR TCA 90 bp GTTCTTACAACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGTATTTCTACAGGAAGTaGCCTGCGGATGGGGAGCAT +
Preference number: 2 (lower is better)
Translates to: VLTTSCGYAIVVAQVFEVYFYRK*PADGEH
Trigger: ATGCTCCCCATCCGCAGGTCACTTCCTGTAGAAATA...CACCTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGTTGTAAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512506.5
ENST00000648615.1
3UTR-3UTR GCA 90 bp TATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCGTTGGTTGCTGTGATTaGAGTAAAACGAGGTTTAAG +
Preference number: 2 (lower is better)
Translates to: YAIVVAQVFEVAAASIIPVGCCD*SKTRFK
Trigger: CTTAAACCTCGTTTTACTGCAATCACAGCAACCAAC...GGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000512506.5
3UTR-3UTR GCA 90 bp TACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAAAACCTTTCACCTTTTaGACTATGGCCAGTAATATT +
Preference number: 2 (lower is better)
Translates to: YEHIQKHPFAFPRGSLHQKPFTF*TMASNI
Trigger: AATATTACTGGCCATAGTGCAAAAGGTGAAAGGTTT...TTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000512023.5
3UTR-3UTR TCA 90 bp TTTCGTCCTGGTTTCCTCAAGACTGGACAATGTTTGATGTTAACTACAATACAGGGGAGTTGGATTACTTaGCCTTTGGGTTCCTTCAGA +
Preference number: 2 (lower is better)
Translates to: FRPGFLKTGQCLMLTTIQGSWIT*PLGSFR
Trigger: TCTGAAGGAACCCAAAGGTCAAGTAATCCAACTCCC...CTGTATTGTAGTTAACATCAAACATTGTCCAGTCTTGAGGAAACCAGGACGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR-3UTR TCA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCTTTAGTCCATCTGTCTaGTACACTTTACGAACACAT +
Preference number: 2 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTFSPSV*YTLRTH
Trigger: ATGTGTTCGTAAAGTGTATCAGACAGATGGACTAAA...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648615.1
3UTR-3UTR TCA 90 bp CTTGTTCTTACAACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGTATTTCTACAGGAAGTaGCCTGCGGATGGGGAGCAT +
Preference number: 2 (lower is better)
Translates to: LVLTTSCGYAIVVAQVFEYFYRK*PADGEH
Trigger: ATGCTCCCCATCCGCAGGTCACTTCCTGTAGAAATA...CTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGTTGTAAGAACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512506.5
ENST00000648615.1
3UTR-3UTR CCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACGGCTTCTGTATCCCATaGTCCACTGTAATCTTTTGG +
Preference number: 2 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNGFCIP*STVIFW
Trigger: CCAAAAGATTACAGTGGACCATGGGATACAGAAGCC...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CCA 90 bp TCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGAAAAAAGCACCTGTCAGCAGTaGAAACCAAAACATTTTGAT +
Preference number: 2 (lower is better)
Translates to: SCTTKSEKTRGHAAVSEKSTCQQ*KPKHFD
Trigger: ATCAAAATGTTTTGGTTTCCACTGCTGACAGGTGCT...TTTTTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR TCA 90 bp ATTTTGCCAGTGCCTTCAGTGCAGAGTACTATTAGTAGAACCAACAATTTCAGAGATGGAGAAGAGATCTaGGTGGGCAGAAAGTTTGTA +
Preference number: 2 (lower is better)
Translates to: ILPVPSVQSTISRTNNFRDGEEI*VGRKFV
Trigger: TACAAACTTTCTGCCCACTCAGATCTCTTCTCCATC...TCTGAAATTGTTGGTTCTACTAATAGTACTCTGCACTGAAGGCACTGGCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR-3UTR TCA 90 bp ACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTTTTAGTCCATCTGTCTaGTACACTTTACGAACACAT +
Preference number: 2 (lower is better)
Translates to: TSCGYAIVVAQVFEVAAAFSPSV*YTLRTH
Trigger: ATGTGTTCGTAAAGTGTATCAGACAGATGGACTAAA...AGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
3UTR-3UTR GCA 90 bp AAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTTCTTTATTTTTCTTCTGTCTaGCATGCTGGCTTCTGTATC +
Preference number: 2 (lower is better)
Translates to: KFLRWQQLASFPQNLMLLYFSSV*HAGFCI
Trigger: GATACAGAAGCCAGCATGGCAGACAGAAGAAAAATA...AAGAAGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648615.1
3UTR CAA 90 bp AACCTGTGGAAGATATGCAAGATTTCTTTGTACACTATGAGGGAGTaGGATTACTTGACCTTTGGGTTCCTTCAGACATCACTAGATCTA +
Preference number: 2 (lower is better)
Translates to: NLWKICKISLYTMRE*DYLTFGFLQTSLDL
Trigger: TAGATCTAGTGATGTCTGAAGGAACCCAAAGGTCAAGTAATCCAACTCCCTCATAGTGTACAAAGAAATCTTGCATATCTTCCACAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR CAA 90 bp CACACACACAACTTGGAACACCTGTGCTCAATTTTAACCATTATTTaGCCAGTGCCTTCAGTGCAGAGTACTATTAGTAGAACCAACAAT +
Preference number: 2 (lower is better)
Translates to: HTHNLEHLCSILTII*PVPSVQSTISRTNN
Trigger: ATTGTTGGTTCTACTAATAGTACTCTGCACTGAAGGCACTGGCAAAATAATGGTTAAAATTGAGCACAGGTGTTCCAAGTTGTGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR-3UTR GCA 90 bp CATGGTAGAGAAAATGGCAATTTTGAGAGAGGAGTGCTTCTAAAGGCATTTCCTTATTTTTCTTCTGTCTaGCATGCTGGCTTCTGTATC +
Preference number: 2 (lower is better)
Translates to: HGRENGNFERGVLLKAFPYFSSV*HAGFCI
Trigger: GATACAGAAGCCAGCATGGCAGACAGAAGAAAAATA...AGGAAATGCCTTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCTCTACCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR GCA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACAAATTTAAAATATTGTaGCAGGTCCTCTCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYKFKIL*QVLSGK
Trigger: TTTCCCTGAGAGGACCTGGCACAATATTTTAAATTT...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR GCA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACCATATGAAGCAGACATaGCCCTATAAAATCCTTTTA +
Preference number: 2 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYHMKQT*PYKILL
Trigger: TAAAAGGATTTTATAGGGGCATGTCTGCTTCATATG...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648615.1
3UTR-3UTR CCA 90 bp TCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGAAAAAAAAGGCCAAGTAATGTaGTGTGATTACTATAATTCC +
Preference number: 2 (lower is better)
Translates to: SCTTKSEKTRGHAAVSEKKGQVM*CDYYNS
Trigger: GGAATTATAGTAATCACACCACATTACTTGGCCTTT...TTTTTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGA
40% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CCA 90 bp CAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTTCTAAAGGCCAAGTAATGTaGTGTGATTACTATAATTCC +
Preference number: 2 (lower is better)
Translates to: QVFEVAAASIIPTKSDASKGQVM*CDYYNS
Trigger: GGAATTATAGTAATCACACCACATTACTTGGCCTTT...AGAAGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648615.1
3UTR-3UTR CCA 90 bp CATGGTAGAGAAAATGGCAATTTTGAGAGAGGAGTGCTTCTAAAGGCATTTCCTAGCACCTGTCAGCAGTaGAAACCAAAACATTTTGAT +
Preference number: 2 (lower is better)
Translates to: HGRENGNFERGVLLKAFPSTCQQ*KPKHFD
Trigger: ATCAAAATGTTTTGGTTTCCACTGCTGACAGGTGCT...AGGAAATGCCTTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCTCTACCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CCA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACTTTTATACACCAGTATaGCATAGGCGAAGTCTTTTA +
Preference number: 2 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYFYTPV*HRRSLL
Trigger: TAAAAGACTTCGCCTATGCCATACTGGTGTATAAAA...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CCA 90 bp TCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTTGTGGGGTACTGAGATCACAAGGAAGTTAAAGTaGGGGAATTTAACAGGGCAC +
Preference number: 2 (lower is better)
Translates to: SLAAGFHIILNHLWGTEITRKLK*GNLTGH
Trigger: GTGCCCTGTTAAATTCCCCCACTTTAACTTCCTTGT...GATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CCA 90 bp TTTCGTCCTGGTTTCCTCAAGACTGGACAATGTTTGATGTTAACTACAATACAGCACACACACACAACTTaGAACACCTGTGCTCAATTT +
Preference number: 2 (lower is better)
Translates to: FRPGFLKTGQCLMLTTIQHTHTT*NTCAQF
Trigger: AAATTGAGCACAGGTGTTCCAAGTTGTGTGTGTGTG...CTGTATTGTAGTTAACATCAAACATTGTCCAGTCTTGAGGAAACCAGGACGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR-3UTR CCA 90 bp TCTGTCTCACTAGATGAGTTGTCAGACCACGATAAAGAGACCCATAACCTTCTTTCTTACAACTTCATGTaGATATGCTATAGTTGTGGC +
Preference number: 2 (lower is better)
Translates to: SVSLDELSDHDKETHNLLSYNFM*ICYSCG
Trigger: GCCACAACTATAGCATATCCACATGAAGTTGTAAGA...AAGAAGGTTATGGGTCTCTTTATCGTGGTCTGACAACTCATCTAGTGAGACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
3UTR-3UTR TCA 90 bp CATGGTAGAGAAAATGGCAATTTTGAGAGAGGAGTGCTTCTAAAGGCATTTCCTAGAAAATGGCAATTTTaGGAGAGGAGTGCTTCTAAA +
Preference number: 2 (lower is better)
Translates to: HGRENGNFERGVLLKAFPRKWQF*ERSASK
Trigger: TTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCT...AGGAAATGCCTTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCTCTACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR TCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACCCCAGAAAAATGTTATaGACACTGTTTCTGCCTAAT +
Preference number: 2 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNPRKML*TLFLPN
Trigger: ATTAGGCAGAAACAGTGTTCATAACATTTTTCTGGG...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR TCA 90 bp AGTCATTATATATTTGAGGAGAAAAGGCTGAACTGTACTTATCAGCTCCAAAGGAGTAGAAATGGCACCTaGAAAGGCAAACACGATAGA +
Preference number: 2 (lower is better)
Translates to: SHYIFEEKRLNCTYQLQRSRNGT*KGKHDR
Trigger: TCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACT...CCTTTGGAGCTGATAAGTACAGTTCAGCCTTTTCTCCTCAAATATATAATGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR GCA 90 bp CACACTAGAACCTTAAGAAATCATGAACTCACAAATTACTTCCCTATCACGGCTTATTTTTCTTCTGTCTaGCATGCTGGCTTCTGTATC +
Preference number: 2 (lower is better)
Translates to: HTRTLRNHELTNYFPITAYFSSV*HAGFCI
Trigger: GATACAGAAGCCAGCATGGCAGACAGAAGAAAAATA...AGCCGTGATAGGGAAGTAATTTGTGAGTTCATGATTTCTTAAGGTTCTAGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR-3UTR GCA 90 bp ATGATATTCTATCCTGACTTCAAAGTTACAAATTCACTGTGGTGGACCCATCTAAAAAAGGCCACAAAGTaGTTTCACGAAGCGTCATTC +
Preference number: 2 (lower is better)
Translates to: MIFYPDFKVTNSLWWTHLKKATK*FHEASF
Trigger: GAATGACGCTTCGTGAAAGCACTTTGTGGCCTTTTT...TAGATGGGTCCACCACAGTGAATTTGTAACTTTGAAGTCAGGATAGAATATCAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR GCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACTATGAACACTGTTTCTaGCTAATACGTGACCAATGT +
Preference number: 2 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNYEHCF*LIRDQC
Trigger: ACATTGGTCACGTATTAGGCAGAAACAGTGTTCATA...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR GCA 90 bp ATGATATTCTATCCTGACTTCAAAGTTACAAATTCACTGTGGTGGACCCATCTAACAGCAGAGAAAGCTTaGAATGACACGCTGCAATAT +
Preference number: 2 (lower is better)
Translates to: MIFYPDFKVTNSLWWTHLTAEKA*NDTLQY
Trigger: ATATTGCAGCGTGTCATTGCAAGCTTTCTCTGCTGT...TAGATGGGTCCACCACAGTGAATTTGTAACTTTGAAGTCAGGATAGAATATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CCA 90 bp ATTTTGCCAGTGCCTTCAGTGCAGAGTACTATTAGTAGAACCAACAATTTCAGAAGCACCTGTCAGCAGTaGAAACCAAAACATTTTGAT +
Preference number: 2 (lower is better)
Translates to: ILPVPSVQSTISRTNNFRSTCQQ*KPKHFD
Trigger: ATCAAAATGTTTTGGTTTCCACTGCTGACAGGTGCT...TCTGAAATTGTTGGTTCTACTAATAGTACTCTGCACTGAAGGCACTGGCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR-3UTR CCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACCACAATGAATGTTTATaGGTCTTCACAAGGCAAATG +
Preference number: 2 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNHNECL*VFTRQM
Trigger: CATTTGCCTTGTGAAGACCCATAAACATTCATTGTG...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR CAA 90 bp ATAAGATGTTCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTaGTGGGGTACTGAGATCAGTAAGACTAGGGAGAGTCTCTATCTT +
Preference number: 2 (lower is better)
Translates to: IRCSLAAGFHIILNH*WGTEISKTRESLYL
Trigger: AAGATAGAGACTCTCCCTAGTCTTACTGATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGAACATCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR CAA 90 bp AAGATATGCAAGATTTCTTTGTACACTATGAGGGAGTTGGATTACTaGACCTTTGGGTTCCTTCAGACATCACTAGATCTAACAGATACA +
Preference number: 2 (lower is better)
Translates to: KICKISLYTMRELDY*TFGFLQTSLDLTDT
Trigger: TGTATCTGTTAGATCTAGTGATGTCTGAAGGAACCCAAAGGTCAAGTAATCCAACTCCCTCATAGTGTACAAAGAAATCTTGCATATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR-3UTR TCA 90 bp TCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTTGTGGGGTACTGAGATCAGAAAATGGCAATTTTaGGAGAGGAGTGCTTCTAAA +
Preference number: 2 (lower is better)
Translates to: SLAAGFHIILNHLWGTEIRKWQF*ERSASK
Trigger: TTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCT...GATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR TCA 90 bp TTTCGTCCTGGTTTCCTCAAGACTGGACAATGTTTGATGTTAACTACAATACAGCCCAGAAAAATGTTATaGACACTGTTTCTGCCTAAT +
Preference number: 2 (lower is better)
Translates to: FRPGFLKTGQCLMLTTIQPRKML*TLFLPN
Trigger: ATTAGGCAGAAACAGTGTTCATAACATTTTTCTGGG...CTGTATTGTAGTTAACATCAAACATTGTCCAGTCTTGAGGAAACCAGGACGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR-3UTR TCA 90 bp AGTCATTATATATTTGAGGAGAAAAGGCTGAACTGTACTTATCAGCTCCAAAGGAGAGAAAGCTTGCAATaGCACGCTGCAATATTCTAT +
Preference number: 2 (lower is better)
Translates to: SHYIFEEKRLNCTYQLQRRESLQ*HAAIFY
Trigger: ATAGAATATTGCAGCGTGTCATTGCAAGCTTTCTCT...CCTTTGGAGCTGATAAGTACAGTTCAGCCTTTTCTCCTCAAATATATAATGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR GCA 90 bp CACACTAGAACCTTAAGAAATCATGAACTCACAAATTACTTCCCTATCACGGCTAGCCATGTACATAAATaGAAGATACCAAACCTCACA +
Preference number: 2 (lower is better)
Translates to: HTRTLRNHELTNYFPITASHVHK*KIPNLT
Trigger: TGTGAGGTTTGGTATCTTGCATTTATGTACATGGCT...AGCCGTGATAGGGAAGTAATTTGTGAGTTCATGATTTCTTAAGGTTCTAGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR-3UTR CCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACAAAGGCCAAGTAATGTaGTGTGATTACTATAATTCC +
Preference number: 2 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNKGQVM*CDYYNS
Trigger: GGAATTATAGTAATCACACCACATTACTTGGCCTTT...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CCA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGTTTTATACACCAGTATaGCATAGGCGAAGTCTTTTA +
Preference number: 2 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKFYTPV*HRRSLL
Trigger: TAAAAGACTTCGCCTATGCCATACTGGTGTATAAAA...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACTTACAAACCGGTTTTTaGTACGTTCCTCATAATACA +
Preference number: 2 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNLQTGF*YVPHNT
Trigger: TGTATTATGAGGAACGTACCAAAAACCGGTTTGTAA...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CCA 90 bp TCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTTGTGGGGTACTGAGATCATTAAAACCACTGCATaGTATCCCGAAATCACAAAC +
Preference number: 2 (lower is better)
Translates to: SLAAGFHIILNHLWGTEIIKTTA*YPEITN
Trigger: GTTTGTGATTTCGGGATACCATGCAGTGGTTTTAAT...GATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CCA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACGAAACAGAGAGTTCCTaGAAACATTTCTATAGTAAG +
Preference number: 2 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDETESS*KHFYSK
Trigger: CTTACTATAGAAATGTTTCCAGGAACTCTCTGTTTC...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507429.5
3UTR-3UTR TCA 90 bp AGTCATTATATATTTGAGGAGAAAAGGCTGAACTGTACTTATCAGCTCCAAAGGCCCAGAAAAATGTTATaGACACTGTTTCTGCCTAAT +
Preference number: 2 (lower is better)
Translates to: SHYIFEEKRLNCTYQLQRPRKML*TLFLPN
Trigger: ATTAGGCAGAAACAGTGTTCATAACATTTTTCTGGG...CCTTTGGAGCTGATAAGTACAGTTCAGCCTTTTCTCCTCAAATATATAATGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR TCA 90 bp CTTGTTCTTACAACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGTTTAGTCCATCTGTCTaGTACACTTTACGAACACAT +
Preference number: 2 (lower is better)
Translates to: LVLTTSCGYAIVVAQVFEFSPSV*YTLRTH
Trigger: ATGTGTTCGTAAAGTGTATCAGACAGATGGACTAAA...CTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGTTGTAAGAACAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
3UTR-3UTR GCA 90 bp TCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTTGTGGGGTACTGAGATCAAATTTAAAATATTGTaGCAGGTCCTCTCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: SLAAGFHIILNHLWGTEIKFKIL*QVLSGK
Trigger: TTTCCCTGAGAGGACCTGGCACAATATTTTAAATTT...GATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR GCA 90 bp GATCTGTATTTTGTTCCCTCTTCACGTAGTCTTGTTCTTACAACTTCATGTGGACATATGAAGCAGACATaGCCCTATAAAATCCTTTTA +
Preference number: 2 (lower is better)
Translates to: DLYFVPSSRSLVLTTSCGHMKQT*PYKILL
Trigger: TAAAAGGATTTTATAGGGGCATGTCTGCTTCATATG...TCCACATGAAGTTGTAAGAACAAGACTACGTGAAGAGGGAACAAAATACAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
3UTR-3UTR CCA 90 bp ATTTTGCCAGTGCCTTCAGTGCAGAGTACTATTAGTAGAACCAACAATTTCAGATTTTATACACCAGTATaGCATAGGCGAAGTCTTTTA +
Preference number: 2 (lower is better)
Translates to: ILPVPSVQSTISRTNNFRFYTPV*HRRSLL
Trigger: TAAAAGACTTCGCCTATGCCATACTGGTGTATAAAA...TCTGAAATTGTTGGTTCTACTAATAGTACTCTGCACTGAAGGCACTGGCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR-3UTR CCA 90 bp TCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTTGTGGGGTACTGAGATCTTACAAACCGGTTTTTaGTACGTTCCTCATAATACA +
Preference number: 2 (lower is better)
Translates to: SLAAGFHIILNHLWGTEILQTGF*YVPHNT
Trigger: TGTATTATGAGGAACGTACCAAAAACCGGTTTGTAA...GATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CCA 90 bp AGTCATTATATATTTGAGGAGAAAAGGCTGAACTGTACTTATCAGCTCCAAAGGCACAATGAATGTTTATaGGTCTTCACAAGGCAAATG +
Preference number: 2 (lower is better)
Translates to: SHYIFEEKRLNCTYQLQRHNECL*VFTRQM
Trigger: CATTTGCCTTGTGAAGACCCATAAACATTCATTGTG...CCTTTGGAGCTGATAAGTACAGTTCAGCCTTTTCTCCTCAAATATATAATGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR TCA 90 bp TTTTCAATGGAAAATCAAAGTTCGTGGCTTTGTCTAACATGCATAGCAGCAAATGAGCACAGGACAAAATaGATACTTTACCAAGAATTG +
Preference number: 2 (lower is better)
Translates to: FSMENQSSWLCLTCIAANEHRTK*ILYQEL
Trigger: CAATTCTTGGTAAAGTATTCATTTTGTCCTGTGCTC...ATTTGCTGCTATGCATGTTAGACAAAGCCACGAACTTTGATTTTCCATTGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507429.5
3UTR-3UTR GCA 90 bp CTTGTTCTTACAACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGCATATGAAGCAGACATaGCCCTATAAAATCCTTTTA +
Preference number: 2 (lower is better)
Translates to: LVLTTSCGYAIVVAQVFEHMKQT*PYKILL
Trigger: TAAAAGGATTTTATAGGGGCATGTCTGCTTCATATG...CTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGTTGTAAGAACAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
3UTR-3UTR CCA 90 bp TTTTCAATGGAAAATCAAAGTTCGTGGCTTTGTCTAACATGCATAGCAGCAAATTCACTAAACATTCAGTaGACTACACAAGGCAATATA +
Preference number: 2 (lower is better)
Translates to: FSMENQSSWLCLTCIAANSLNIQ*TTQGNI
Trigger: TATATTGCCTTGTGTAGTCCACTGAATGTTTAGTGA...ATTTGCTGCTATGCATGTTAGACAAAGCCACGAACTTTGATTTTCCATTGAAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507429.5
3UTR-3UTR CAA 90 bp TGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGTTTCCCCGCGGTTCCTaGCATCAAGCTGTAACCGAG +
Preference number: 3 (lower is better)
Translates to: WHKFLRWQQLASFPQNLMFPRGS*HQAVTE
Trigger: CTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAA...CATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
3UTR-3UTR CAA 90 bp ATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCATAAGCCAAATGGGGTaGGTTGCTGTGATTGCAGTA +
Preference number: 3 (lower is better)
Translates to: IQKHPFAFPRGSLHQAVTISQMG*VAVIAV
Trigger: TACTGCAATCACAGCAACCAACCCCATTTGGCTTAT...GGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
3UTR-3UTR CAA 90 bp ACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTTTTCCCCGCGGTTCCTaGCATCAAGCTGTAACCGAG +
Preference number: 3 (lower is better)
Translates to: TSCGYAIVVAQVFEVAAAFPRGS*HQAVTE
Trigger: CTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAA...AGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
3UTR-3UTR CAA 90 bp ATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCATAAGCCAAATGGGGTaGGTTGCTGTGATTGCAGTA +
Preference number: 3 (lower is better)
Translates to: IRLSPRFLASSCNRVFISISQMG*VAVIAV
Trigger: TACTGCAATCACAGCAACCAACCCCATTTGGCTTAT...GCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000631654.1
ENST00000648615.1
3UTR-3UTR CAA 90 bp TCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATAAGCCAAATGGGGTaGGTTGCTGTGATTGCAGTA +
Preference number: 3 (lower is better)
Translates to: SCGYAIVVAQVFEVAAASISQMG*VAVIAV
Trigger: TACTGCAATCACAGCAACCAACCCCATTTGGCTTAT...GCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATATCCACATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
3UTR TCA 72 bp TTTTTGCAGTACAGCAGTCCTCGTGCTGCTATCCATTaGGTAGGTAAACCACCAATTCATAGGTGGCCATCA +
Preference number: 3 (lower is better)
Translates to: FLQYSSPRAAIH*VGKPPIHRWPS
Trigger: TGATGGCCACCTATGAATTGGTGGTTTACCTACTCAATGGATAGCAGCACGAGGACTGCTGTACTGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
3UTR TCA 72 bp CCATTGCACAAAATGTACAGTTCAGGTATACTGAAATaGGTACCACACCGGCGTCCAATTGCGGCAGTTTTT +
Preference number: 3 (lower is better)
Translates to: PLHKMYSSGILK*VPHRRPIAAVF
Trigger: AAAAACTGCCGCAATTGGACGCCGGTGTGGTACTCATTTCAGTATACCTGAACTGTACATTTTGTGCAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR CCA 72 bp CCGGCGTCCAATTGCGGCAGTTTTTATACACCAGTATaGCATAGGCGAAGTCTTTTAACAGAATTACAGCAA +
Preference number: 3 (lower is better)
Translates to: PASNCGSFYTPV*HRRSLLTELQQ
Trigger: TTGCTGTAATTCTGTTAAAAGACTTCGCCTATGCCATACTGGTGTATAAAAACTGCCGCAATTGGACGCCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CAA 90 bp CTGATACACTTTACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCTATGGCCAGTAATATaGCACATCCATACTTATGAA +
Preference number: 3 (lower is better)
Translates to: LIHFTNTFKSTHSPFPAVLWPVI*HIHTYE
Trigger: TTCATAAGTATGGATGTGCAATATTACTGGCCATAG...AACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTGTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512023.5
3UTR TCA 72 bp GCAAATGGCACTGTATTAGGCAGTAGAAATGGCACCTaGAAAGGCAAACACGATAGATTCAGACCTTCTCTA +
Preference number: 3 (lower is better)
Translates to: ANGTVLGSRNGT*KGKHDRFRPSL
Trigger: TAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGCCTAATACAGTGCCATTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CAA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTATTAAATTTAAAATATaGTGCCAGGTCCTCTCAGGG +
Preference number: 3 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSIKFKI*CQVLSG
Trigger: CCCTGAGAGGACCTGGCACAATATTTTAAATTTAAT...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CAA 90 bp TCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGAAAAAATTAAATTTAAAATATaGTGCCAGGTCCTCTCAGGG +
Preference number: 3 (lower is better)
Translates to: SCTTKSEKTRGHAAVSEKIKFKI*CQVLSG
Trigger: CCCTGAGAGGACCTGGCACAATATTTTAAATTTAAT...TTTTTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CAA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGACAGCAAGGGGGCCCTaGTCTATAATATTTATACTG +
Preference number: 3 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKTARGP*SIIFIL
Trigger: CAGTATAAATATTATAGACAAGGGCCCCCTTGCTGT...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CAA 90 bp CACACTAGAACCTTAAGAAATCATGAACTCACAAATTACTTCCCTATCACGGCTTACACTATGAGGGAGTaGGATTACTTGACCTTTGGG +
Preference number: 3 (lower is better)
Translates to: HTRTLRNHELTNYFPITAYTMRE*DYLTFG
Trigger: CCCAAAGGTCAAGTAATCCAACTCCCTCATAGTGTA...AGCCGTGATAGGGAAGTAATTTGTGAGTTCATGATTTCTTAAGGTTCTAGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR-3UTR CAA 90 bp CTTTTAGTCCATCTGTCTGATACACTTTACGAACACATTCAAAAGCACCCATTCATAAGCCAAATGGGGTaGGTTGCTGTGATTGCAGTA +
Preference number: 3 (lower is better)
Translates to: LLVHLSDTLYEHIQKHPFISQMG*VAVIAV
Trigger: TACTGCAATCACAGCAACCAACCCCATTTGGCTTAT...GAATGGGTGCTTTTGAATGTGTTCGTAAAGTGTATCAGACAGATGGACTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
3UTR-3UTR CAA 90 bp TCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTTGTGGGGTACTGAGATCCAATATTCTATAATGTaGGGGGTACGACAGGGTACA +
Preference number: 3 (lower is better)
Translates to: SLAAGFHIILNHLWGTEIQYSIM*GVRQGT
Trigger: TGTACCCTGTCGTACCCCCAACATTATAGAATATTG...GATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CAA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACACCTTCTCTACAGATTaGTTACAAACCGGTTTTTGG +
Preference number: 3 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNTFSTD*LQTGFW
Trigger: CCAAAAACCGGTTTGTAACAAATCTGTAGAGAAGGT...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR CCA 72 bp TTAGCTGCTGGTTTTCATATCATTCTTAATCATTTGTaGGGTACTGAGATCAGTAAGACTAGGGAGAGTCTC +
Preference number: 3 (lower is better)
Translates to: LAAGFHIILNHL*GTEISKTRESL
Trigger: GAGACTCTCCCTAGTCTTACTGATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR CCA 72 bp TTTGTACACTATGAGGGAGTTGGATTACTTGACCTTTaGGTTCCTTCAGACATCACTAGATCTAACAGATAC +
Preference number: 3 (lower is better)
Translates to: FVHYEGVGLLDL*VPSDITRSNRY
Trigger: GTATCTGTTAGATCTAGTGATGTCTGAAGGAACCCAAAGGTCAAGTAATCCAACTCCCTCATAGTGTACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR-3UTR CAA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGACGCTATTTCATTGGTaGTCAAAAACAGTGACTACT +
Preference number: 3 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKTLFHW*SKTVTT
Trigger: AGTAGTCACTGTTTTTGACAACCAATGAAATAGCGT...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CAA 90 bp CATGGTAGAGAAAATGGCAATTTTGAGAGAGGAGTGCTTCTAAAGGCATTTCCTTTAGACGCTATTTCATaGGTTGTCAAAAACAGTGAC +
Preference number: 3 (lower is better)
Translates to: HGRENGNFERGVLLKAFPLDAIS*VVKNSD
Trigger: GTCACTGTTTTTGACAACCAATGAAATAGCGTCTAA...AGGAAATGCCTTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCTCTACCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CAA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGGTCATACATAAACTATaGCAGATTGTGCTTAGGGAA +
Preference number: 3 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKVIHKL*QIVLRE
Trigger: TTCCCTAAGCACAATCTGCAATAGTTTATGTATGAC...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CAA 90 bp AGTCATTATATATTTGAGGAGAAAAGGCTGAACTGTACTTATCAGCTCCAAAGGCCTCTTCACGTAGTCTaGTTCTTACAACTTCATGTG +
Preference number: 3 (lower is better)
Translates to: SHYIFEEKRLNCTYQLQRPLHVV*FLQLHV
Trigger: CACATGAAGTTGTAAGAACAAGACTACGTGAAGAGG...CCTTTGGAGCTGATAAGTACAGTTCAGCCTTTTCTCCTCAAATATATAATGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648615.1
3UTR CCA 72 bp TTCTATCCTGACTTCAAAGTTACAAATTCACTGTGGTaGACCCATCTAGAAAGGATGGTTCTACAAAGTTAC +
Preference number: 3 (lower is better)
Translates to: FYPDFKVTNSLW*THLERMVLQSY
Trigger: GTAACTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTGAAGTCAGGATAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CAA 90 bp CACACTAGAACCTTAAGAAATCATGAACTCACAAATTACTTCCCTATCACGGCTACGCTATTTCATTGGTaGTCAAAAACAGTGACTACT +
Preference number: 3 (lower is better)
Translates to: HTRTLRNHELTNYFPITATLFHW*SKTVTT
Trigger: AGTAGTCACTGTTTTTGACAACCAATGAAATAGCGT...AGCCGTGATAGGGAAGTAATTTGTGAGTTCATGATTTCTTAAGGTTCTAGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR-3UTR CAA 90 bp TTTCGTCCTGGTTTCCTCAAGACTGGACAATGTTTGATGTTAACTACAATACAGACGCTATTTCATTGGTaGTCAAAAACAGTGACTACT +
Preference number: 3 (lower is better)
Translates to: FRPGFLKTGQCLMLTTIQTLFHW*SKTVTT
Trigger: AGTAGTCACTGTTTTTGACAACCAATGAAATAGCGT...CTGTATTGTAGTTAACATCAAACATTGTCCAGTCTTGAGGAAACCAGGACGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR-3UTR CAA 90 bp ATTTTGCCAGTGCCTTCAGTGCAGAGTACTATTAGTAGAACCAACAATTTCAGATTAGACGCTATTTCATaGGTTGTCAAAAACAGTGAC +
Preference number: 3 (lower is better)
Translates to: ILPVPSVQSTISRTNNFRLDAIS*VVKNSD
Trigger: GTCACTGTTTTTGACAACCAATGAAATAGCGTCTAA...TCTGAAATTGTTGGTTCTACTAATAGTACTCTGCACTGAAGGCACTGGCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR TCA 72 bp AAATATACAGGCAACAAAACAGATACCCTCAATAGCTaGGATATACTTAGTCTGTCAAAGGTCATGTGTAGG +
Preference number: 3 (lower is better)
Translates to: KYTGNKTDTLNS*DILSLSKVMCR
Trigger: CCTACACATGACCTTTGACAGACTAAGTATATCTCAGCTATTGAGGGTATCTGTTTTGTTGCCTGTATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507429.5
3UTR-3UTR CAA 90 bp AGTCATTATATATTTGAGGAGAAAAGGCTGAACTGTACTTATCAGCTCCAAAGGTTAGACGCTATTTCATaGGTTGTCAAAAACAGTGAC +
Preference number: 3 (lower is better)
Translates to: SHYIFEEKRLNCTYQLQRLDAIS*VVKNSD
Trigger: GTCACTGTTTTTGACAACCAATGAAATAGCGTCTAA...CCTTTGGAGCTGATAAGTACAGTTCAGCCTTTTCTCCTCAAATATATAATGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
3UTR-3UTR CAA 90 bp TTTTCAATGGAAAATCAAAGTTCGTGGCTTTGTCTAACATGCATAGCAGCAAATGATTCCAGAACCAGATaGGTCAAACCAACTGTTTAT +
Preference number: 3 (lower is better)
Translates to: FSMENQSSWLCLTCIAANDSRTR*VKPTVY
Trigger: ATAAACAGTTGGTTTGACCAATCTGGTTCTGGAATC...ATTTGCTGCTATGCATGTTAGACAAAGCCACGAACTTTGATTTTCCATTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR TCA 90 bp CGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAAATGTCCTCCGGCCGCTaGGGCGGGACGCGGATCTGG +
Preference number: 4 (lower is better)
Translates to: RLSPRFLASSCNRVFISQMSSGR*GGTRIW
Trigger: CCAGATCCGCGTCCCGCCTCAGCGGCCGGAGGACAT...TTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502594.5
ENST00000631654.1
ENST00000648615.1
CDS-3UTR CCA 90 bp AACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGGCTTCGGTCCCGGACTaGAGACGCACAGCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: NTFKSTHSPFPAVPCIKLASVPD*RRTAPR
Trigger: CCGGGGCGCTGTGCGTCTCCAGTCCGGGACCGAAGC...CAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR GCA 90 bp CAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGCCTCCGGCAAACAGATaGACCAGCGTGTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QKHPFAFPRGSLHQAVTEPPANR*TSVSLW
Trigger: CCAGAGGGACACGCTGGTGCATCTGTTTGCCGGAGG...CTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR TCA 90 bp TGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGATGTCCTCCGGCCGCTaGGGCGGGACGCGGATCTGG +
Preference number: 4 (lower is better)
Translates to: WHKFLRWQQLASFPQNLMMSSGR*GGTRIW
Trigger: CCAGATCCGCGTCCCGCCTCAGCGGCCGGAGGACAT...CATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR GCA 90 bp TACCTGCTAAAGCAGACAGCAAGGGGGCCCTTGTCTATAATATTTATACTGTCCAGCCGCGCCACCGCCTaGCTAAGCGCGCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: YLLKQTARGPLSIIFILSSRATA*LSAPPF
Trigger: GAAGGGCGGCGCGCTTAGGCAGGCGGTGGCGCGGCT...GGACAGTATAAATATTATAGACAAGGGCCCCCTTGCTGTCTGCTTTAGCAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp TACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGACGGCGAGGAGAGCTaGCCGAGATGCGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: YEHIQKHPFAFPRGSLHQDGEES*PRCGCR
Trigger: TCTGCAGCCGCATCTCGGCCAGCTCTCCTCGCCGTC...TTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR TCA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACATGTCCTCCGGCCGCTaGGGCGGGACGCGGATCTGG +
Preference number: 4 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYMSSGR*GGTRIW
Trigger: CCAGATCCGCGTCCCGCCTCAGCGGCCGGAGGACAT...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGCTTCGGTCCCGGACTaGAGACGCACAGCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSASVPD*RRTAPR
Trigger: CCGGGGCGCTGTGCGTCTCCAGTCCGGGACCGAAGC...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp ATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCCTCCGGCAAACAGATaGACCAGCGTGTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: IRLSPRFLASSCNRVFISPPANR*TSVSLW
Trigger: CCAGAGGGACACGCTGGTGCATCTGTTTGCCGGAGG...GCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502594.5
ENST00000631654.1
ENST00000648615.1
CDS-3UTR CCA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCGACGGCGAGGAGAGCTaGCCGAGATGCGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTDGEES*PRCGCR
Trigger: TCTGCAGCCGCATCTCGGCCAGCTCTCCTCGCCGTC...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACATGTCCTCCGGCCGCTaGGGCGGGACGCGGATCTGG +
Preference number: 4 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDMSSGR*GGTRIW
Trigger: CCAGATCCGCGTCCCGCCTCAGCGGCCGGAGGACAT...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR GCA 90 bp GTTCTTACAACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGAGCCGCGCCACCGCCTaGCTAAGCGCGCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: VLTTSCGYAIVVAQVFEVSRATA*LSAPPF
Trigger: GAAGGGCGGCGCGCTTAGGCAGGCGGTGGCGCGGCT...CACCTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGTTGTAAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR GCA 90 bp GCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAGAGAGCTGGCCGAGATaGGGCTGCAGAAAGCAACCG +
Preference number: 4 (lower is better)
Translates to: AIVVAQVFEVAAASIIPTESWPR*GCRKQP
Trigger: CGGTTGCTTTCTGCAGCCGCATCTCGGCCAGCTCTC...TGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR CCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACGCTTCGGTCCCGGACTaGAGACGCACAGCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNASVPD*RRTAPR
Trigger: CCGGGGCGCTGTGCGTCTCCAGTCCGGGACCGAAGC...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACGCTTCGGTCCCGGACTaGAGACGCACAGCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDASVPD*RRTAPR
Trigger: CCGGGGCGCTGTGCGTCTCCAGTCCGGGACCGAAGC...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR CCA 90 bp ATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCACCAGCGTGTCCCTCTaGCTCATTCTCTCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: IRLSPRFLASSCNRVFISTSVSL*LILSPA
Trigger: TGCGGGAGAGAGAATGAGCCAGAGGGACACGCTGGT...GCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502594.5
ENST00000631654.1
ENST00000648615.1
CDS-3UTR TCA 90 bp CACACTAGAACCTTAAGAAATCATGAACTCACAAATTACTTCCCTATCACGGCTATGTCCTCCGGCCGCTaGGGCGGGACGCGGATCTGG +
Preference number: 4 (lower is better)
Translates to: HTRTLRNHELTNYFPITAMSSGR*GGTRIW
Trigger: CCAGATCCGCGTCCCGCCTCAGCGGCCGGAGGACAT...AGCCGTGATAGGGAAGTAATTTGTGAGTTCATGATTTCTTAAGGTTCTAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR TCA 90 bp CTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAAATGGAGACACTACTCGGTTaGCACTGGCTCCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: LSPRFLASSCNRVFISQMETLLG*HWLQPW
Trigger: CCATGGCTGGAGCCAGTGTCAACCGAGTAGTGTCTC...CATTTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000631654.1
ENST00000648615.1
CDS-3UTR GCA 90 bp ATGATATTCTATCCTGACTTCAAAGTTACAAATTCACTGTGGTGGACCCATCTAAGCCGCGCCACCGCCTaGCTAAGCGCGCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: MIFYPDFKVTNSLWWTHLSRATA*LSAPPF
Trigger: GAAGGGCGGCGCGCTTAGGCAGGCGGTGGCGCGGCT...TAGATGGGTCCACCACAGTGAATTTGTAACTTTGAAGTCAGGATAGAATATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCTGGCCGAGATGCGGCTaGAGAAAGCAACCGGCACAG +
Preference number: 4 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTWPRCG*RKQPAQ
Trigger: CTGTGCCGGTTGCTTTCTGCAGCCGCATCTCGGCCA...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp TTAGTCCATCTGTCTGATACACTTTACGAACACATTCAAAAGCACCCATTCGCCGACGGCGAGGAGAGCTaGCCGAGATGCGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LVHLSDTLYEHIQKHPFADGEES*PRCGCR
Trigger: TCTGCAGCCGCATCTCGGCCAGCTCTCCTCGCCGTC...GGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTGTATCAGACAGATGGACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR TCA 90 bp TGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGGAGACACTACTCGGTTaGCACTGGCTCCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: WHKFLRWQQLASFPQNLMETLLG*HWLQPW
Trigger: CCATGGCTGGAGCCAGTGTCAACCGAGTAGTGTCTC...CATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR GCA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACTGGCCGAGATGCGGCTaGAGAAAGCAACCGGCACAG +
Preference number: 4 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYWPRCG*RKQPAQ
Trigger: CTGTGCCGGTTGCTTTCTGCAGCCGCATCTCGGCCA...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp AACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGGTACAGCAGTCCTCGTaGTGCTATCCATTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: NTFKSTHSPFPAVPCIKLVQQSS*CYPLSR
Trigger: CCTACTCAATGGATAGCAGCACGAGGACTGCTGTAC...CAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR GCA 90 bp GCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACACCGGGAGGCAGAGGTTaGAGTGACCTGAGATCATGT +
Preference number: 4 (lower is better)
Translates to: AIVVAQVFEVAAASIIPTPGGRG*SDLRSC
Trigger: ACATGATCTCAGGTCACTGCAACCTCTGCCTCCCGG...TGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CCA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCACCAGCGTGTCCCTCTaGCTCATTCTCTCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTTSVSL*LILSPA
Trigger: TGCGGGAGAGAGAATGAGCCAGAGGGACACGCTGGT...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp CAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTTCTGAGACACTACTCGGTTaGCACTGGCTCCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: QVFEVAAASIIPTKSDASETLLG*HWLQPW
Trigger: CCATGGCTGGAGCCAGTGTCAACCGAGTAGTGTCTC...AGAAGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR TCA 90 bp ATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCATCACCTTTAGGCAATaGAGAGGTCCGGGAGACACT +
Preference number: 4 (lower is better)
Translates to: IRLSPRFLASSCNRVFISITFRQ*RGPGDT
Trigger: AGTGTCTCCCGGACCTCTTCATTGCCTAAAGGTGAT...GCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000631654.1
ENST00000648615.1
CDS-3UTR TCA 90 bp GATACACTTTACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCATCACCTTTAGGCAATaGAGAGGTCCGGGAGACACT +
Preference number: 4 (lower is better)
Translates to: DTLYEHIQKHPFAFPRGSITFRQ*RGPGDT
Trigger: AGTGTCTCCCGGACCTCTTCATTGCCTAAAGGTGAT...GGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR TCA 90 bp CACTTTACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCGCCTGCCATTGCAGCTaGAATCATATGTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: HFTNTFKSTHSPFPAVPCACHCS*NHMYLG
Trigger: ACCCAAGTACATATGATTTCAGCTGCAATGGCAGGC...GCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512506.5
ENST00000648615.1
CDS-3UTR TCA 90 bp GTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATTGCGGATGGGGAGCATaGGATGACACGATCTCACTC +
Preference number: 4 (lower is better)
Translates to: VAQVFEVAAASIIPTKSDCGWGA*DDTISL
Trigger: GAGTGAGATCGTGTCATCTCATGCTCCCCATCCGCA...ATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512506.5
ENST00000648615.1
CDS-3UTR GCA 90 bp GAATCTGTCTCACTAGATGAGTTGTCAGACCACGATAAAGAGACCCATAACCTTCCTCCGGCAAACAGATaGACCAGCGTGTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ESVSLDELSDHDKETHNLPPANR*TSVSLW
Trigger: CCAGAGGGACACGCTGGTGCATCTGTTTGCCGGAGG...AAGGTTATGGGTCTCTTTATCGTGGTCTGACAACTCATCTAGTGAGACAGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR CCA 90 bp CACACTAGAACCTTAAGAAATCATGAACTCACAAATTACTTCCCTATCACGGCTGACGGCGAGGAGAGCTaGCCGAGATGCGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: HTRTLRNHELTNYFPITADGEES*PRCGCR
Trigger: TCTGCAGCCGCATCTCGGCCAGCTCTCCTCGCCGTC...AGCCGTGATAGGGAAGTAATTTGTGAGTTCATGATTTCTTAAGGTTCTAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CCA 90 bp AGTCTTGTTCTTACAACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGCTTCGGTCCCGGACTaGAGACGCACAGCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: SLVLTTSCGYAIVVAQVFASVPD*RRTAPR
Trigger: CCGGGGCGCTGTGCGTCTCCAGTCCGGGACCGAAGC...AAAAACTTGTGCCACAACTATAGCATATCCACATGAAGTTGTAAGAACAAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR CCA 90 bp ATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCCAAAGTATATTGCTCTaGAAGGGGCTACCCCCACTA +
Preference number: 4 (lower is better)
Translates to: IQKHPFAFPRGSLHQAVTQSILL*KGLPPL
Trigger: TAGTGGGGGTAGCCCCTTCCAGAGCAATATACTTTG...GGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR TCA 90 bp AACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTATTTCTACAGGAAGTaGCCTGCCATTGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: NTFKSTHSPFPAVPCIKLYFYRK*PAIAAE
Trigger: TTCAGCTGCAATGGCAGGTCACTTCCTGTAGAAATA...CAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502594.5
CDS-3UTR TCA 90 bp CGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAATATTTCTACAGGAAGTaGCCTGCCATTGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: RLSPRFLASSCNRVFISQYFYRK*PAIAAE
Trigger: TTCAGCTGCAATGGCAGGTCACTTCCTGTAGAAATA...TTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000631654.1
CDS-3UTR TCA 90 bp CTGATACACTTTACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTTATTTCTACAGGAAGTaGCCTGCGGATGGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: LIHFTNTFKSTHSPFPAVYFYRK*PADGEH
Trigger: ATGCTCCCCATCCGCAGGTCACTTCCTGTAGAAATA...AACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTGTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512506.5
ENST00000648615.1
CDS-3UTR GCA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGGAGAGCTGGCCGAGATaGGGCTGCAGAAAGCAACCG +
Preference number: 4 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKESWPR*GCRKQP
Trigger: CGGTTGCTTTCTGCAGCCGCATCTCGGCCAGCTCTC...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACGAGAGCTGGCCGAGATaGGGCTGCAGAAAGCAACCG +
Preference number: 4 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDESWPR*GCRKQP
Trigger: CGGTTGCTTTCTGCAGCCGCATCTCGGCCAGCTCTC...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR GCA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGCCTCCGGCAAACAGATaGACCAGCGTGTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKPPANR*TSVSLW
Trigger: CCAGAGGGACACGCTGGTGCATCTGTTTGCCGGAGG...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp CTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAAATGGTACAGCAGTCCTCGTaGTGCTATCCATTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LSPRFLASSCNRVFISQMVQQSS*CYPLSR
Trigger: CCTACTCAATGGATAGCAGCACGAGGACTGCTGTAC...CATTTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR GCA 90 bp TCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGAAAAACCGGGAGGCAGAGGTTaGAGTGACCTGAGATCATGT +
Preference number: 4 (lower is better)
Translates to: SCTTKSEKTRGHAAVSEKPGGRG*SDLRSC
Trigger: ACATGATCTCAGGTCACTGCAACCTCTGCCTCCCGG...TTTTTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CCA 90 bp TCTGTCTCACTAGATGAGTTGTCAGACCACGATAAAGAGACCCATAACCTTCTTACCAGCGTGTCCCTCTaGCTCATTCTCTCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: SVSLDELSDHDKETHNLLTSVSL*LILSPA
Trigger: TGCGGGAGAGAGAATGAGCCAGAGGGACACGCTGGT...AAGAAGGTTATGGGTCTCTTTATCGTGGTCTGACAACTCATCTAGTGAGACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR CCA 90 bp ATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAAAGTATATTGCTCTaGAAGGGGCTACCCCCACTA +
Preference number: 4 (lower is better)
Translates to: IRLSPRFLASSCNRVFISQSILL*KGLPPL
Trigger: TAGTGGGGGTAGCCCCTTCCAGAGCAATATACTTTG...GCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000631654.1
ENST00000648615.1
CDS-3UTR TCA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGGAGACACTACTCGGTTaGCACTGGCTCCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKETLLG*HWLQPW
Trigger: CCATGGCTGGAGCCAGTGTCAACCGAGTAGTGTCTC...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACGAGACACTACTCGGTTaGCACTGGCTCCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNETLLG*HWLQPW
Trigger: CCATGGCTGGAGCCAGTGTCAACCGAGTAGTGTCTC...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp TTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATCACCTTTAGGCAATaGAGAGGTCCGGGAGACACT +
Preference number: 4 (lower is better)
Translates to: LWHKFLRWQQLASFPQNLITFRQ*RGPGDT
Trigger: AGTGTCTCCCGGACCTCTTCATTGCCTAAAGGTGAT...CAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR TCA 90 bp TACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAACCTGCCATTGCAGCTaGAATCATATGTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: YEHIQKHPFAFPRGSLHQTCHCS*NHMYLG
Trigger: ACCCAAGTACATATGATTTCAGCTGCAATGGCAGGT...TTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502594.5
CDS-3UTR TCA 90 bp AGGTTTAAGTTAGTCCATATTTCTACAGGAAGTGACCTGCGGATGGGGAGCATGTCAGGTATACTGAAATaGGTACCACACCGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: RFKLVHISTGSDLRMGSMSGILK*VPHRRP
Trigger: TGGACGCCGGTGTGGTACTCATTTCAGTATACCTGA...CATGCTCCCCATCCGCAGGTCACTTCCTGTAGAAATATGGACTAACTTAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR GCA 90 bp TCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTTGTGGGGTACTGAGATCGAGAGCTGGCCGAGATaGGGCTGCAGAAAGCAACCG +
Preference number: 4 (lower is better)
Translates to: SLAAGFHIILNHLWGTEIESWPR*GCRKQP
Trigger: CGGTTGCTTTCTGCAGCCGCATCTCGGCCAGCTCTC...GATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp TTTCGTCCTGGTTTCCTCAAGACTGGACAATGTTTGATGTTAACTACAATACAGCCTCCGGCAAACAGATaGACCAGCGTGTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FRPGFLKTGQCLMLTTIQPPANR*TSVSLW
Trigger: CCAGAGGGACACGCTGGTGCATCTGTTTGCCGGAGG...CTGTATTGTAGTTAACATCAAACATTGTCCAGTCTTGAGGAAACCAGGACGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CCA 90 bp TTTTCAATGGAAAATCAAAGTTCGTGGCTTTGTCTAACATGCATAGCAGCAAATGACGGCGAGGAGAGCTaGCCGAGATGCGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: FSMENQSSWLCLTCIAANDGEES*PRCGCR
Trigger: TCTGCAGCCGCATCTCGGCCAGCTCTCCTCGCCGTC...ATTTGCTGCTATGCATGTTAGACAAAGCCACGAACTTTGATTTTCCATTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR CCA 90 bp CATGGTAGAGAAAATGGCAATTTTGAGAGAGGAGTGCTTCTAAAGGCATTTCCTACCAGCGTGTCCCTCTaGCTCATTCTCTCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: HGRENGNFERGVLLKAFPTSVSL*LILSPA
Trigger: TGCGGGAGAGAGAATGAGCCAGAGGGACACGCTGGT...AGGAAATGCCTTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCTCTACCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACACCAGCGTGTCCCTCTaGCTCATTCTCTCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDTSVSL*LILSPA
Trigger: TGCGGGAGAGAGAATGAGCCAGAGGGACACGCTGGT...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR CCA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGACCAGCGTGTCCCTCTaGCTCATTCTCTCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKTSVSL*LILSPA
Trigger: TGCGGGAGAGAGAATGAGCCAGAGGGACACGCTGGT...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTCACTGGCTCCAGCCATaGTGTTCAGCTGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSHWLQP*CSAELQ
Trigger: CTGAAGTTCAGCTGAACACCATGGCTGGAGCCAGTG...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp TACACTTTACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTCAAAGTATATTGCTCTaGAAGGGGCTACCCCCACTA +
Preference number: 4 (lower is better)
Translates to: YTLRTHSKAPIRLSPRFLQSILL*KGLPPL
Trigger: TAGTGGGGGTAGCCCCTTCCAGAGCAATATACTTTG...AAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CCA 90 bp CTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAAATGCAAAGTATATTGCTCTaGAAGGGGCTACCCCCACTA +
Preference number: 4 (lower is better)
Translates to: LSPRFLASSCNRVFISQMQSILL*KGLPPL
Trigger: TAGTGGGGGTAGCCCCTTCCAGAGCAATATACTTTG...CATTTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000631654.1
ENST00000648615.1
CDS-3UTR CCA 90 bp CGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAAACAAGGAAGTTAAAGTaGGGGAATTTAACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: RLSPRFLASSCNRVFISQTRKLK*GNLTGH
Trigger: GTGCCCTGTTAAATTCCCCCACTTTAACTTCCTTGT...TTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR TCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTATCACCTTTAGGCAATaGAGAGGTCCGGGAGACACT +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSITFRQ*RGPGDT
Trigger: AGTGTCTCCCGGACCTCTTCATTGCCTAAAGGTGAT...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp CTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAAATGACCTGCCATTGCAGCTaGAATCATATGTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: LSPRFLASSCNRVFISQMTCHCS*NHMYLG
Trigger: ACCCAAGTACATATGATTTCAGCTGCAATGGCAGGT...CATTTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000631654.1
CDS-3UTR TCA 90 bp TACACTTTACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTCGTGCTGCTATCCATTaGGTAGGTAAACCACCAATT +
Preference number: 4 (lower is better)
Translates to: YTLRTHSKAPIRLSPRFLRAAIH*VGKPPI
Trigger: AATTGGTGGTTTACCTACTCAATGGATAGCAGCACG...AAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR TCA 90 bp TCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGAAAAATCAGGTATACTGAAATaGGTACCACACCGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: SCTTKSEKTRGHAAVSEKSGILK*VPHRRP
Trigger: TGGACGCCGGTGTGGTACTCATTTCAGTATACCTGA...TTTTTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp AACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGGTCACAGAAGATGACTaGAGTCGTGTTTTTACAACT +
Preference number: 4 (lower is better)
Translates to: NTFKSTHSPFPAVPCIKLVTEDD*SRVFTT
Trigger: AGTTGTAAAAACACGACTGCAGTCATCTTCTGTGAC...CAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000648615.1
CDS-3UTR GCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGTACAGCAGTCCTCGTaGTGCTATCCATTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSVQQSS*CYPLSR
Trigger: CCTACTCAATGGATAGCAGCACGAGGACTGCTGTAC...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp ATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAAATGTACAGTAAATaGCTGCCATTGCAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: IQKHPFAFPRGSLHQAVTEMYSK*LPLQLK
Trigger: TTTCAGCTGCAATGGCAGGCATTTACTGTACATTTC...GGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512506.5
ENST00000648615.1
CDS-3UTR GCA 90 bp CACTTTACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCGTTGGTTGCTGTGATTaGAGTAAAACGAGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: HFTNTFKSTHSPFPAVPCVGCCD*SKTRFK
Trigger: CTTAAACCTCGTTTTACTGCAATCACAGCAACCAAC...GCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000512506.5
CDS-3UTR CCA 90 bp AAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTTCTTCACTGGCTCCAGCCATaGTGTTCAGCTGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: KFLRWQQLASFPQNLMLLHWLQP*CSAELQ
Trigger: CTGAAGTTCAGCTGAACACCATGGCTGGAGCCAGTG...AAGAAGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000648615.1
CDS-3UTR CCA 90 bp GAATCTGTCTCACTAGATGAGTTGTCAGACCACGATAAAGAGACCCATAACCTTCACTGGCTCCAGCCATaGTGTTCAGCTGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: ESVSLDELSDHDKETHNLHWLQP*CSAELQ
Trigger: CTGAAGTTCAGCTGAACACCATGGCTGGAGCCAGTG...AAGGTTATGGGTCTCTTTATCGTGGTCTGACAACTCATCTAGTGAGACAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR CCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTTTCTGTCTGCCATGCTaGCTTCTGTATCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSFCLPC*LLYPMV
Trigger: GACCATGGGATACAGAAGCCAGCATGGCAGACAGAA...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTCATTGCACTCCAGCATaGGTGACAAGAGTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSHCTPA*VTRVKL
Trigger: GAGCTTCACTCTTGTCACCCATGCTGGAGTGCAATG...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CCA 90 bp GGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCATTGCACTCCAGCATaGGTGACAAGAGTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GYAIVVAQVFEVAAASIIHCTPA*VTRVKL
Trigger: GAGCTTCACTCTTGTCACCCATGCTGGAGTGCAATG...AATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR TCA 90 bp GCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTAAGCGTCACAGAAGATaGCTGCAGTCGTGTTTTTAC +
Preference number: 4 (lower is better)
Translates to: AQVFEVAAASIIPTKSDAKRHRR*LQSCFY
Trigger: GTAAAAACACGACTGCAGTCATCTTCTGTGACGCTT...AGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000648615.1
CDS-3UTR TCA 90 bp CTTGTTCTTACAACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGGAGACACTACTCGGTTaGCACTGGCTCCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: LVLTTSCGYAIVVAQVFEETLLG*HWLQPW
Trigger: CCATGGCTGGAGCCAGTGTCAACCGAGTAGTGTCTC...CTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGTTGTAAGAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR TCA 90 bp GCAGTAAAACCCAAGCTTCTGTCCATAATACTCTTCCAAGTCACAAAAGAATTTGAGACACTACTCGGTTaGCACTGGCTCCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: AVKPKLLSIILFQVTKEFETLLG*HWLQPW
Trigger: CCATGGCTGGAGCCAGTGTCAACCGAGTAGTGTCTC...AAATTCTTTTGTGACTTGGAAGAGTATTATGGACAGAAGCTTGGGTTTTACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000631654.1
ENST00000648615.1
CDS-3UTR TCA 90 bp GAATCTGTCTCACTAGATGAGTTGTCAGACCACGATAAAGAGACCCATAACCTTATCACCTTTAGGCAATaGAGAGGTCCGGGAGACACT +
Preference number: 4 (lower is better)
Translates to: ESVSLDELSDHDKETHNLITFRQ*RGPGDT
Trigger: AGTGTCTCCCGGACCTCTTCATTGCCTAAAGGTGAT...AAGGTTATGGGTCTCTTTATCGTGGTCTGACAACTCATCTAGTGAGACAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR TCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTACAGTTCAGGTATACTaGAATGAGTACCACACCGGC +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSTVQVY*NEYHTG
Trigger: GCCGGTGTGGTACTCATTTCAGTATACCTGAACTGT...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCACTATGTTTCACTGGTaGCAGCAGAGAAAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTTMFHW*QQRKLA
Trigger: TGCAAGCTTTCTCTGCTGTCACCAGTGAAACATAGT...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp GGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTGGGAGTTGGATTACTTaGCCTTTGGGTTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GYAIVVAQVFEVAAASIIGSWIT*PLGSFR
Trigger: TCTGAAGGAACCCAAAGGTCAAGTAATCCAACTCCC...AATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR TCA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACGCCTGCCATTGCAGCTaGAATCATATGTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYACHCS*NHMYLG
Trigger: ACCCAAGTACATATGATTTCAGCTGCAATGGCAGGC...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR TCA 90 bp GGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTATGGGGAGCATGAGATaGCACGATCTCACTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GYAIVVAQVFEVAAASIIMGSMR*HDLTLF
Trigger: GAAAAGAGTGAGATCGTGTCATCTCATGCTCCCCAT...AATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512506.5
ENST00000648615.1
CDS-3UTR TCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTATGGGGAGCATGAGATaGCACGATCTCACTCTTTTC +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSMGSMR*HDLTLF
Trigger: GAAAAGAGTGAGATCGTGTCATCTCATGCTCCCCAT...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR TCA 90 bp CGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAAAGTCACAAAAGAATTTaGGGGAGGTTTAAGTTAGTC +
Preference number: 4 (lower is better)
Translates to: RLSPRFLASSCNRVFISQSHKRI*GRFKLV
Trigger: GACTAACTTAAACCTCCCTCAAATTCTTTTGTGACT...TTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000631654.1
ENST00000648615.1
CDS-3UTR GCA 90 bp TTTTCAATGGAAAATCAAAGTTCGTGGCTTTGTCTAACATGCATAGCAGCAAATCCTCCGGCAAACAGATaGACCAGCGTGTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FSMENQSSWLCLTCIAANPPANR*TSVSLW
Trigger: CCAGAGGGACACGCTGGTGCATCTGTTTGCCGGAGG...ATTTGCTGCTATGCATGTTAGACAAAGCCACGAACTTTGATTTTCCATTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR GCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTACACCGGCGTCCAATTaGGGCAGTTTTTATACACCA +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSTPASN*GSFYTP
Trigger: TGGTGTATAAAAACTGCCGCAATTGGACGCCGGTGT...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp CGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAAAGCCATGTACATAAATaGAAGATACCAAACCTCACA +
Preference number: 4 (lower is better)
Translates to: RLSPRFLASSCNRVFISQSHVHK*KIPNLT
Trigger: TGTGAGGTTTGGTATCTTGCATTTATGTACATGGCT...TTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CCA 90 bp ATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCTTTTACAACTTCCAGTaGACATGTCAGAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: IRLSPRFLASSCNRVFISFYNFQ*TCQNSS
Trigger: GGAGCTATTCTGACATGTCCACTGGAAGTTGTAAAA...GCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000631654.1
ENST00000648615.1
CDS-3UTR CCA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACCACTGGCTCCAGCCATaGTGTTCAGCTGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDHWLQP*CSAELQ
Trigger: CTGAAGTTCAGCTGAACACCATGGCTGGAGCCAGTG...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR CCA 90 bp TACCTGCTAAAGCAGACAGCAAGGGGGCCCTTGTCTATAATATTTATACTGTCCCAAAGTATATTGCTCTaGAAGGGGCTACCCCCACTA +
Preference number: 4 (lower is better)
Translates to: YLLKQTARGPLSIIFILSQSILL*KGLPPL
Trigger: TAGTGGGGGTAGCCCCTTCCAGAGCAATATACTTTG...GGACAGTATAAATATTATAGACAAGGGCCCCCTTGCTGTCTGCTTTAGCAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp CGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAATCTTACAACTTCATGTaGATATGCTATAGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: RLSPRFLASSCNRVFISQSYNFM*ICYSCG
Trigger: GCCACAACTATAGCATATCCACATGAAGTTGTAAGA...TTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CCA 90 bp TTAGTCCATCTGTCTGATACACTTTACGAACACATTCAAAAGCACCCATTCGCCTTCTGTCTGCCATGCTaGCTTCTGTATCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: LVHLSDTLYEHIQKHPFAFCLPC*LLYPMV
Trigger: GACCATGGGATACAGAAGCCAGCATGGCAGACAGAA...GGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTGTATCAGACAGATGGACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CCA 90 bp GATACACTTTACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCAGCACCTGTCAGCAGTaGAAACCAAAACATTTTGAT +
Preference number: 4 (lower is better)
Translates to: DTLYEHIQKHPFAFPRGSSTCQQ*KPKHFD
Trigger: ATCAAAATGTTTTGGTTTCCACTGCTGACAGGTGCT...GGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CCA 90 bp CGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAACACAATGAATGTTTATaGGTCTTCACAAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: RLSPRFLASSCNRVFISQHNECL*VFTRQM
Trigger: CATTTGCCTTGTGAAGACCCATAAACATTCATTGTG...TTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CCA 90 bp TCTGATACACTTTACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTACAAATTCACTGTGGTaGACCCATCTAGAAAGGATG +
Preference number: 4 (lower is better)
Translates to: SDTLYEHIQKHPFAFPRGTNSLW*THLERM
Trigger: CATCCTTTCTAGATGGGTCCACCACAGTGAATTTGT...ACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTGTATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR TCA 90 bp TACCTGCTAAAGCAGACAGCAAGGGGGCCCTTGTCTATAATATTTATACTGTCCAAGCGTCACAGAAGATaGCTGCAGTCGTGTTTTTAC +
Preference number: 4 (lower is better)
Translates to: YLLKQTARGPLSIIFILSKRHRR*LQSCFY
Trigger: GTAAAAACACGACTGCAGTCATCTTCTGTGACGCTT...GGACAGTATAAATATTATAGACAAGGGCCCCCTTGCTGTCTGCTTTAGCAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp TTTTCAATGGAAAATCAAAGTTCGTGGCTTTGTCTAACATGCATAGCAGCAAATGAGACACTACTCGGTTaGCACTGGCTCCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: FSMENQSSWLCLTCIAANETLLG*HWLQPW
Trigger: CCATGGCTGGAGCCAGTGTCAACCGAGTAGTGTCTC...ATTTGCTGCTATGCATGTTAGACAAAGCCACGAACTTTGATTTTCCATTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR TCA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACATCACCTTTAGGCAATaGAGAGGTCCGGGAGACACT +
Preference number: 4 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDITFRQ*RGPGDT
Trigger: AGTGTCTCCCGGACCTCTTCATTGCCTAAAGGTGAT...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR TCA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACACCTGCCATTGCAGCTaGAATCATATGTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYTCHCS*NHMYLG
Trigger: ACCCAAGTACATATGATTTCAGCTGCAATGGCAGGT...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000446041.6
CDS-3UTR TCA 90 bp TCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGAAAAAACTATGTTTCACTGGTaGCAGCAGAGAAAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SCTTKSEKTRGHAAVSEKTMFHW*QQRKLA
Trigger: TGCAAGCTTTCTCTGCTGTCACCAGTGAAACATAGT...TTTTTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTACTATGTTTCACTGGTaGCAGCAGAGAAAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSTMFHW*QQRKLA
Trigger: TGCAAGCTTTCTCTGCTGTCACCAGTGAAACATAGT...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp GTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATAGTAGAAATGGCACCTaGAAAGGCAAACACGATAGA +
Preference number: 4 (lower is better)
Translates to: VAQVFEVAAASIIPTKSDSRNGT*KGKHDR
Trigger: TCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACT...ATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR TCA 90 bp ATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATTGAGGAGAAAAGGCTaGACTGTACTTATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: IVVAQVFEVAAASIIPTKLRRKG*TVLISS
Trigger: GGAGCTGATAAGTACAGTTCAGCCTTTTCTCCTCAA...TTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR TCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTCAAGATAAGGTTTGCTaGCTGAATCAAGCGAGCCTA +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSQDKVC*LNQASL
Trigger: TAGGCTCGCTTGATTCAGTCAGCAAACCTTATCTTG...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR TCA 90 bp GCAGTAAAACCCAAGCTTCTGTCCATAATACTCTTCCAAGTCACAAAAGAATTTTGCGGATGGGGAGCATaGGATGACACGATCTCACTC +
Preference number: 4 (lower is better)
Translates to: AVKPKLLSIILFQVTKEFCGWGA*DDTISL
Trigger: GAGTGAGATCGTGTCATCTCATGCTCCCCATCCGCA...AAATTCTTTTGTGACTTGGAAGAGTATTATGGACAGAAGCTTGGGTTTTACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR TCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACTATTTCTACAGGAAGTaGCCTGCGGATGGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNYFYRK*PADGEH
Trigger: ATGCTCCCCATCCGCAGGTCACTTCCTGTAGAAATA...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR GCA 90 bp ATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCCATATGAAGCAGACATaGCCCTATAAAATCCTTTTA +
Preference number: 4 (lower is better)
Translates to: IQKHPFAFPRGSLHQAVTHMKQT*PYKILL
Trigger: TAAAAGGATTTTATAGGGGCATGTCTGCTTCATATG...GGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR GCA 90 bp AACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGCATATGAAGCAGACATaGCCCTATAAAATCCTTTTA +
Preference number: 4 (lower is better)
Translates to: NTFKSTHSPFPAVPCIKLHMKQT*PYKILL
Trigger: TAAAAGGATTTTATAGGGGCATGTCTGCTTCATATG...CAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR GCA 90 bp TACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAAACTTCATGTGGATATaGTATAGTTGTGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: YEHIQKHPFAFPRGSLHQNFMWI*YSCGTS
Trigger: ACTTGTGCCACAACTATAGCATATCCACATGAAGTT...TTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR GCA 90 bp GAATCTGTCTCACTAGATGAGTTGTCAGACCACGATAAAGAGACCCATAACCTTACACCGGCGTCCAATTaGGGCAGTTTTTATACACCA +
Preference number: 4 (lower is better)
Translates to: ESVSLDELSDHDKETHNLTPASN*GSFYTP
Trigger: TGGTGTATAAAAACTGCCGCAATTGGACGCCGGTGT...AAGGTTATGGGTCTCTTTATCGTGGTCTGACAACTCATCTAGTGAGACAGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR GCA 90 bp TCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCCCATTATTTTGCCAGTaGCTTCAGTGCAGAGTACTA +
Preference number: 4 (lower is better)
Translates to: SCGYAIVVAQVFEVAAASPLFCQ*LQCRVL
Trigger: TAGTACTCTGCACTGAAGGCACTGGCAAAATAATGG...GCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATATCCACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CCA 90 bp TCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGAAAAAGGCTTCTGTATCCCATaGTCCACTGTAATCTTTTGG +
Preference number: 4 (lower is better)
Translates to: SCTTKSEKTRGHAAVSEKGFCIP*STVIFW
Trigger: CCAAAAGATTACAGTGGACCATGGGATACAGAAGCC...TTTTTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp CATGGTAGAGAAAATGGCAATTTTGAGAGAGGAGTGCTTCTAAAGGCATTTCCTTTCTGTCTGCCATGCTaGCTTCTGTATCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: HGRENGNFERGVLLKAFPFCLPC*LLYPMV
Trigger: GACCATGGGATACAGAAGCCAGCATGGCAGACAGAA...AGGAAATGCCTTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCTCTACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCACAAATTCACTGTGGTaGACCCATCTAGAAAGGATG +
Preference number: 4 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTTNSLW*THLERM
Trigger: CATCCTTTCTAGATGGGTCCACCACAGTGAATTTGT...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp GTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATCACACACACACAACTTaGAACACCTGTGCTCAATTT +
Preference number: 4 (lower is better)
Translates to: VAQVFEVAAASIIPTKSDHTHTT*NTCAQF
Trigger: AAATTGAGCACAGGTGTTCCAAGTTGTGTGTGTGTG...ATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CCA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCATTAAGGCAGTCAGCTaGTCTACACAGTGCGAAAAT +
Preference number: 4 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTIKAVS*STQCEN
Trigger: ATTTTCGCACTGTGTAGACCAGCTGACTGCCTTAAT...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR TCA 90 bp TTTCGTCCTGGTTTCCTCAAGACTGGACAATGTTTGATGTTAACTACAATACAGATCACCTTTAGGCAATaGAGAGGTCCGGGAGACACT +
Preference number: 4 (lower is better)
Translates to: FRPGFLKTGQCLMLTTIQITFRQ*RGPGDT
Trigger: AGTGTCTCCCGGACCTCTTCATTGCCTAAAGGTGAT...CTGTATTGTAGTTAACATCAAACATTGTCCAGTCTTGAGGAAACCAGGACGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR TCA 90 bp CTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAAATGTTTAGTCCATCTGTCTaGTACACTTTACGAACACAT +
Preference number: 4 (lower is better)
Translates to: LSPRFLASSCNRVFISQMFSPSV*YTLRTH
Trigger: ATGTGTTCGTAAAGTGTATCAGACAGATGGACTAAA...CATTTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR TCA 90 bp CACACTAGAACCTTAAGAAATCATGAACTCACAAATTACTTCCCTATCACGGCTTCAGGTATACTGAAATaGGTACCACACCGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: HTRTLRNHELTNYFPITASGILK*VPHRRP
Trigger: TGGACGCCGGTGTGGTACTCATTTCAGTATACCTGA...AGCCGTGATAGGGAAGTAATTTGTGAGTTCATGATTTCTTAAGGTTCTAGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR TCA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGACAGTTCAGGTATACTaGAATGAGTACCACACCGGC +
Preference number: 4 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKTVQVY*NEYHTG
Trigger: GCCGGTGTGGTACTCATTTCAGTATACCTGAACTGT...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACGGGAGTTGGATTACTTaGCCTTTGGGTTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNGSWIT*PLGSFR
Trigger: TCTGAAGGAACCCAAAGGTCAAGTAATCCAACTCCC...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR TCA 90 bp GGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTTTCTGCCATTGCAGCTaGAATCATATGTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: GYAIVVAQVFEVAAASIIFCHCS*NHMYLG
Trigger: ACCCAAGTACATATGATTTCAGCTGCAATGGCAGAA...AATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512023.5
CDS-3UTR GCA 90 bp GTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATTATTTTTCTTCTGTCTaGCATGCTGGCTTCTGTATC +
Preference number: 4 (lower is better)
Translates to: VAQVFEVAAASIIPTKSDYFSSV*HAGFCI
Trigger: GATACAGAAGCCAGCATGGCAGACAGAAGAAAAATA...ATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR GCA 90 bp TACCTGCTAAAGCAGACAGCAAGGGGGCCCTTGTCTATAATATTTATACTGTCCAAAAAGGCCACAAAGTaGTTTCACGAAGCGTCATTC +
Preference number: 4 (lower is better)
Translates to: YLLKQTARGPLSIIFILSKKATK*FHEASF
Trigger: GAATGACGCTTCGTGAAAGCACTTTGTGGCCTTTTT...GGACAGTATAAATATTATAGACAAGGGCCCCCTTGCTGTCTGCTTTAGCAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp AGGTTTAAGTTAGTCCATATTTCTACAGGAAGTGACCTGCGGATGGGGAGCATGGAAATGTACAGTAAATaGCTGCCATTGCAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: RFKLVHISTGSDLRMGSMEMYSK*LPLQLK
Trigger: TTTCAGCTGCAATGGCAGGCATTTACTGTACATTTC...CATGCTCCCCATCCGCAGGTCACTTCCTGTAGAAATATGGACTAACTTAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CCA 90 bp ATGATATTCTATCCTGACTTCAAAGTTACAAATTCACTGTGGTGGACCCATCTACACTGGCTCCAGCCATaGTGTTCAGCTGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: MIFYPDFKVTNSLWWTHLHWLQP*CSAELQ
Trigger: CTGAAGTTCAGCTGAACACCATGGCTGGAGCCAGTG...TAGATGGGTCCACCACAGTGAATTTGTAACTTTGAAGTCAGGATAGAATATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp CTTGTTCTTACAACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGCACTGGCTCCAGCCATaGTGTTCAGCTGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: LVLTTSCGYAIVVAQVFEHWLQP*CSAELQ
Trigger: CTGAAGTTCAGCTGAACACCATGGCTGGAGCCAGTG...CTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGTTGTAAGAACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000648615.1
CDS-3UTR CCA 90 bp GCAGTAAAACCCAAGCTTCTGTCCATAATACTCTTCCAAGTCACAAAAGAATTTCACTGGCTCCAGCCATaGTGTTCAGCTGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: AVKPKLLSIILFQVTKEFHWLQP*CSAELQ
Trigger: CTGAAGTTCAGCTGAACACCATGGCTGGAGCCAGTG...AAATTCTTTTGTGACTTGGAAGAGTATTATGGACAGAAGCTTGGGTTTTACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000631654.1
ENST00000648615.1
CDS-3UTR CCA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGCAAAGTATATTGCTCTaGAAGGGGCTACCCCCACTA +
Preference number: 4 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKQSILL*KGLPPL
Trigger: TAGTGGGGGTAGCCCCTTCCAGAGCAATATACTTTG...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACCAAAGTATATTGCTCTaGAAGGGGCTACCCCCACTA +
Preference number: 4 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDQSILL*KGLPPL
Trigger: TAGTGGGGGTAGCCCCTTCCAGAGCAATATACTTTG...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR CCA 90 bp AAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTTCTTGGCTTCTGTATCCCATaGTCCACTGTAATCTTTTGG +
Preference number: 4 (lower is better)
Translates to: KFLRWQQLASFPQNLMLLGFCIP*STVIFW
Trigger: CCAAAAGATTACAGTGGACCATGGGATACAGAAGCC...AAGAAGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTACAAGGAAGTTAAAGTaGGGGAATTTAACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSTRKLK*GNLTGH
Trigger: GTGCCCTGTTAAATTCCCCCACTTTAACTTCCTTGT...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp CTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAAATGATTAAAACCACTGCATaGTATCCCGAAATCACAAAC +
Preference number: 4 (lower is better)
Translates to: LSPRFLASSCNRVFISQMIKTTA*YPEITN
Trigger: GTTTGTGATTTCGGGATACCATGCAGTGGTTTTAAT...CATTTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CCA 90 bp TACCTGCTAAAGCAGACAGCAAGGGGGCCCTTGTCTATAATATTTATACTGTCCGGATTACTTGACCTTTaGGTTCCTTCAGACATCACT +
Preference number: 4 (lower is better)
Translates to: YLLKQTARGPLSIIFILSGLLDL*VPSDIT
Trigger: AGTGATGTCTGAAGGAACCCAAAGGTCAAGTAATCC...GGACAGTATAAATATTATAGACAAGGGCCCCCTTGCTGTCTGCTTTAGCAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CCA 90 bp TACACTTTACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTAAATATATTTCGTCCTaGTTTCCTCAAGACTGGACA +
Preference number: 4 (lower is better)
Translates to: YTLRTHSKAPIRLSPRFLKYISS*FPQDWT
Trigger: TGTCCAGTCTTGAGGAAACCAGGACGAAATATATTT...AAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR TCA 90 bp CATGGTAGAGAAAATGGCAATTTTGAGAGAGGAGTGCTTCTAAAGGCATTTCCTAAGCGTCACAGAAGATaGCTGCAGTCGTGTTTTTAC +
Preference number: 4 (lower is better)
Translates to: HGRENGNFERGVLLKAFPKRHRR*LQSCFY
Trigger: GTAAAAACACGACTGCAGTCATCTTCTGTGACGCTT...AGGAAATGCCTTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCTCTACCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp GCAGTAAAACCCAAGCTTCTGTCCATAATACTCTTCCAAGTCACAAAAGAATTTATCACCTTTAGGCAATaGAGAGGTCCGGGAGACACT +
Preference number: 4 (lower is better)
Translates to: AVKPKLLSIILFQVTKEFITFRQ*RGPGDT
Trigger: AGTGTCTCCCGGACCTCTTCATTGCCTAAAGGTGAT...AAATTCTTTTGTGACTTGGAAGAGTATTATGGACAGAAGCTTGGGTTTTACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000631654.1
ENST00000648615.1
CDS-3UTR TCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACACCTGCCATTGCAGCTaGAATCATATGTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNTCHCS*NHMYLG
Trigger: ACCCAAGTACATATGATTTCAGCTGCAATGGCAGGT...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000446041.6
CDS-3UTR TCA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACACCTGCCATTGCAGCTaGAATCATATGTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDTCHCS*NHMYLG
Trigger: ACCCAAGTACATATGATTTCAGCTGCAATGGCAGGT...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR TCA 90 bp CATGGTAGAGAAAATGGCAATTTTGAGAGAGGAGTGCTTCTAAAGGCATTTCCTCGTGCTGCTATCCATTaGGTAGGTAAACCACCAATT +
Preference number: 4 (lower is better)
Translates to: HGRENGNFERGVLLKAFPRAAIH*VGKPPI
Trigger: AATTGGTGGTTTACCTACTCAATGGATAGCAGCACG...AGGAAATGCCTTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCTCTACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp ATTTTGCCAGTGCCTTCAGTGCAGAGTACTATTAGTAGAACCAACAATTTCAGAACAGTTCAGGTATACTaGAATGAGTACCACACCGGC +
Preference number: 4 (lower is better)
Translates to: ILPVPSVQSTISRTNNFRTVQVY*NEYHTG
Trigger: GCCGGTGTGGTACTCATTTCAGTATACCTGAACTGT...TCTGAAATTGTTGGTTCTACTAATAGTACTCTGCACTGAAGGCACTGGCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR TCA 90 bp GTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATCCCAGAAAAATGTTATaGACACTGTTTCTGCCTAAT +
Preference number: 4 (lower is better)
Translates to: VAQVFEVAAASIIPTKSDPRKML*TLFLPN
Trigger: ATTAGGCAGAAACAGTGTTCATAACATTTTTCTGGG...ATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR TCA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACAGAGAAAGCTTGCAATaGCACGCTGCAATATTCTAT +
Preference number: 4 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYRESLQ*HAAIFY
Trigger: ATAGAATATTGCAGCGTGTCATTGCAAGCTTTCTCT...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACTTGAGGAGAAAAGGCTaGACTGTACTTATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNLRRKG*TVLISS
Trigger: GGAGCTGATAAGTACAGTTCAGCCTTTTCTCCTCAA...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp CATGGTAGAGAAAATGGCAATTTTGAGAGAGGAGTGCTTCTAAAGGCATTTCCTGATGGAGAAGAGATCTaGGTGGGCAGAAAGTTTGTA +
Preference number: 4 (lower is better)
Translates to: HGRENGNFERGVLLKAFPDGEEI*VGRKFV
Trigger: TACAAACTTTCTGCCCACTCAGATCTCTTCTCCATC...AGGAAATGCCTTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCTCTACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp ATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAAGTCACAGAAGATGACTaGAGTCGTGTTTTTACAACT +
Preference number: 4 (lower is better)
Translates to: IVVAQVFEVAAASIIPTKVTEDD*SRVFTT
Trigger: AGTTGTAAAAACACGACTGCAGTCATCTTCTGTGAC...TTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000648615.1
CDS-3UTR GCA 90 bp TTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGAACTTCATGTGGATATaGTATAGTTGTGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: LWHKFLRWQQLASFPQNLNFMWI*YSCGTS
Trigger: ACTTGTGCCACAACTATAGCATATCCACATGAAGTT...CAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR GCA 90 bp GCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTAACTTCATGTGGATATaGTATAGTTGTGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: AQVFEVAAASIIPTKSDANFMWI*YSCGTS
Trigger: ACTTGTGCCACAACTATAGCATATCCACATGAAGTT...AGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR GCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTTATTTTTCTTCTGTCTaGCATGCTGGCTTCTGTATC +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSYFSSV*HAGFCI
Trigger: GATACAGAAGCCAGCATGGCAGACAGAAGAAAAATA...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp TATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCTATGAACACTGTTTCTaGCTAATACGTGACCAATGT +
Preference number: 4 (lower is better)
Translates to: YAIVVAQVFEVAAASIIPYEHCF*LIRDQC
Trigger: ACATTGGTCACGTATTAGGCAGAAACAGTGTTCATA...GGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR GCA 90 bp ACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTGTTGGTTGCTGTGATTaGAGTAAAACGAGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: TSCGYAIVVAQVFEVAAAVGCCD*SKTRFK
Trigger: CTTAAACCTCGTTTTACTGCAATCACAGCAACCAAC...AGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000512506.5
CDS-3UTR CCA 90 bp TCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGAAAAATTTTACAACTTCCAGTaGACATGTCAGAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: SCTTKSEKTRGHAAVSEKFYNFQ*TCQNSS
Trigger: GGAGCTATTCTGACATGTCCACTGGAAGTTGTAAAA...TTTTTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACTTTTACAACTTCCAGTaGACATGTCAGAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYFYNFQ*TCQNSS
Trigger: GGAGCTATTCTGACATGTCCACTGGAAGTTGTAAAA...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp ACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTTTTTACAACTTCCAGTaGACATGTCAGAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: TSCGYAIVVAQVFEVAAAFYNFQ*TCQNSS
Trigger: GGAGCTATTCTGACATGTCCACTGGAAGTTGTAAAA...AGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000648615.1
CDS-3UTR CCA 90 bp ATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATTTTACAACTTCCAGTaGACATGTCAGAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: IVVAQVFEVAAASIIPTKFYNFQ*TCQNSS
Trigger: GGAGCTATTCTGACATGTCCACTGGAAGTTGTAAAA...TTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000648615.1
CDS-3UTR CCA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGGGCTTCTGTATCCCATaGTCCACTGTAATCTTTTGG +
Preference number: 4 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKGFCIP*STVIFW
Trigger: CCAAAAGATTACAGTGGACCATGGGATACAGAAGCC...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp TACCTGCTAAAGCAGACAGCAAGGGGGCCCTTGTCTATAATATTTATACTGTCCGAGAAGAGATCTGAGTaGGCAGAAAGTTTGTACATT +
Preference number: 4 (lower is better)
Translates to: YLLKQTARGPLSIIFILSEKRSE*AESLYI
Trigger: AATGTACAAACTTTCTGCCCACTCAGATCTCTTCTC...GGACAGTATAAATATTATAGACAAGGGCCCCCTTGCTGTCTGCTTTAGCAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp GAATCTGTCTCACTAGATGAGTTGTCAGACCACGATAAAGAGACCCATAACCTTATTAAGGCAGTCAGCTaGTCTACACAGTGCGAAAAT +
Preference number: 4 (lower is better)
Translates to: ESVSLDELSDHDKETHNLIKAVS*STQCEN
Trigger: ATTTTCGCACTGTGTAGACCAGCTGACTGCCTTAAT...AAGGTTATGGGTCTCTTTATCGTGGTCTGACAACTCATCTAGTGAGACAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648615.1
3UTR CAA 72 bp TCAAGCTGTAACCGAGTCTTTATAAGCCAAATGGGGTaGGTTGCTGTGATTGCAGTAAAACGAGGTTTAAGT +
Preference number: 4 (lower is better)
Translates to: SSCNRVFISQMG*VAVIAVKRGLS
Trigger: ACTTAAACCTCGTTTTACTGCAATCACAGCAACCAACCCCATTTGGCTTATAAAGACTCGGTTACAGCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000512506.5
CDS-3UTR TCA 90 bp TTTCGTCCTGGTTTCCTCAAGACTGGACAATGTTTGATGTTAACTACAATACAGAAGCGTCACAGAAGATaGCTGCAGTCGTGTTTTTAC +
Preference number: 4 (lower is better)
Translates to: FRPGFLKTGQCLMLTTIQKRHRR*LQSCFY
Trigger: GTAAAAACACGACTGCAGTCATCTTCTGTGACGCTT...CTGTATTGTAGTTAACATCAAACATTGTCCAGTCTTGAGGAAACCAGGACGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR TCA 90 bp TCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGAAAAATTTAGTCCATCTGTCTaGTACACTTTACGAACACAT +
Preference number: 4 (lower is better)
Translates to: SCTTKSEKTRGHAAVSEKFSPSV*YTLRTH
Trigger: ATGTGTTCGTAAAGTGTATCAGACAGATGGACTAAA...TTTTTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp ATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATTTAGTCCATCTGTCTaGTACACTTTACGAACACAT +
Preference number: 4 (lower is better)
Translates to: IVVAQVFEVAAASIIPTKFSPSV*YTLRTH
Trigger: ATGTGTTCGTAAAGTGTATCAGACAGATGGACTAAA...TTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR TCA 90 bp GGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTTTTAGTCCATCTGTCTaGTACACTTTACGAACACAT +
Preference number: 4 (lower is better)
Translates to: GYAIVVAQVFEVAAASIIFSPSV*YTLRTH
Trigger: ATGTGTTCGTAAAGTGTATCAGACAGATGGACTAAA...AATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR TCA 90 bp TCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTTGTGGGGTACTGAGATCCGTGCTGCTATCCATTaGGTAGGTAAACCACCAATT +
Preference number: 4 (lower is better)
Translates to: SLAAGFHIILNHLWGTEIRAAIH*VGKPPI
Trigger: AATTGGTGGTTTACCTACTCAATGGATAGCAGCACG...GATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp TTTCGTCCTGGTTTCCTCAAGACTGGACAATGTTTGATGTTAACTACAATACAGCGTGCTGCTATCCATTaGGTAGGTAAACCACCAATT +
Preference number: 4 (lower is better)
Translates to: FRPGFLKTGQCLMLTTIQRAAIH*VGKPPI
Trigger: AATTGGTGGTTTACCTACTCAATGGATAGCAGCACG...CTGTATTGTAGTTAACATCAAACATTGTCCAGTCTTGAGGAAACCAGGACGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR TCA 90 bp TCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGAAAAAAGAAAATGGCAATTTTaGGAGAGGAGTGCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: SCTTKSEKTRGHAAVSEKRKWQF*ERSASK
Trigger: TTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCT...TTTTTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp CAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTTCTAGAAAATGGCAATTTTaGGAGAGGAGTGCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: QVFEVAAASIIPTKSDASRKWQF*ERSASK
Trigger: TTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCT...AGAAGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR TCA 90 bp ATGATATTCTATCCTGACTTCAAAGTTACAAATTCACTGTGGTGGACCCATCTAACATGCCGCAGTCAGTaGAAAAGCCGAGAAATCAAC +
Preference number: 4 (lower is better)
Translates to: MIFYPDFKVTNSLWWTHLTCRSQ*KSREIN
Trigger: GTTGATTTCTCGGCTTTTTCACTGACTGCGGCATGT...TAGATGGGTCCACCACAGTGAATTTGTAACTTTGAAGTCAGGATAGAATATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp CTTGTTCTTACAACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGACATGCCGCAGTCAGTaGAAAAGCCGAGAAATCAAC +
Preference number: 4 (lower is better)
Translates to: LVLTTSCGYAIVVAQVFETCRSQ*KSREIN
Trigger: GTTGATTTCTCGGCTTTTTCACTGACTGCGGCATGT...CTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGTTGTAAGAACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR TCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTCCCAGAAAAATGTTATaGACACTGTTTCTGCCTAAT +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSPRKML*TLFLPN
Trigger: ATTAGGCAGAAACAGTGTTCATAACATTTTTCTGGG...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp CATGGTAGAGAAAATGGCAATTTTGAGAGAGGAGTGCTTCTAAAGGCATTTCCTAGTAGAAATGGCACCTaGAAAGGCAAACACGATAGA +
Preference number: 4 (lower is better)
Translates to: HGRENGNFERGVLLKAFPSRNGT*KGKHDR
Trigger: TCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACT...AGGAAATGCCTTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCTCTACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACAGTAGAAATGGCACCTaGAAAGGCAAACACGATAGA +
Preference number: 4 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNSRNGT*KGKHDR
Trigger: TCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACT...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp TCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTTGTGGGGTACTGAGATCGATGGAGAAGAGATCTaGGTGGGCAGAAAGTTTGTA +
Preference number: 4 (lower is better)
Translates to: SLAAGFHIILNHLWGTEIDGEEI*VGRKFV
Trigger: TACAAACTTTCTGCCCACTCAGATCTCTTCTCCATC...GATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACGAAATACTAAGTACATaGTGGAGAAGAGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYEILST*WRRDLS
Trigger: ACTCAGATCTCTTCTCCATCATGTACTTAGTATTTC...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp TCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGAAAAAGAAATACTAAGTACATaGTGGAGAAGAGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: SCTTKSEKTRGHAAVSEKEILST*WRRDLS
Trigger: ACTCAGATCTCTTCTCCATCATGTACTTAGTATTTC...TTTTTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp TACCTGCTAAAGCAGACAGCAAGGGGGCCCTTGTCTATAATATTTATACTGTCCAACTTCATGTGGATATaGTATAGTTGTGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: YLLKQTARGPLSIIFILSNFMWI*YSCGTS
Trigger: ACTTGTGCCACAACTATAGCATATCCACATGAAGTT...GGACAGTATAAATATTATAGACAAGGGCCCCCTTGCTGTCTGCTTTAGCAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR GCA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGAAAAAGGCCACAAAGTaGTTTCACGAAGCGTCATTC +
Preference number: 4 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKKKATK*FHEASF
Trigger: GAATGACGCTTCGTGAAAGCACTTTGTGGCCTTTTT...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGACAGCAGAGAAAGCTTaGAATGACACGCTGCAATAT +
Preference number: 4 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKTAEKA*NDTLQY
Trigger: ATATTGCAGCGTGTCATTGCAAGCTTTCTCTGCTGT...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCAAGATGTTCCTTAGCTaGTGGTTTTCATATCATTCT +
Preference number: 4 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTKMFLS*WFSYHS
Trigger: AGAATGATATGAAAACCAGCAGCTAAGGAACATCTT...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTAGCCATGTACATAAATaGAAGATACCAAACCTCACA +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSSHVHK*KIPNLT
Trigger: TGTGAGGTTTGGTATCTTGCATTTATGTACATGGCT...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp TTAGTCCATCTGTCTGATACACTTTACGAACACATTCAAAAGCACCCATTCGCCGTTGGTTGCTGTGATTaGAGTAAAACCTTTCACCTT +
Preference number: 4 (lower is better)
Translates to: LVHLSDTLYEHIQKHPFAVGCCD*SKTFHL
Trigger: AAGGTGAAAGGTTTTACTGCAATCACAGCAACCAAC...GGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTGTATCAGACAGATGGACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512023.5
CDS-3UTR CCA 90 bp AAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTTCTTTTTTACAACTTCCAGTaGACATGTCAGAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: KFLRWQQLASFPQNLMLLFYNFQ*TCQNSS
Trigger: GGAGCTATTCTGACATGTCCACTGGAAGTTGTAAAA...AAGAAGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000648615.1
CDS-3UTR CCA 90 bp TACCTGCTAAAGCAGACAGCAAGGGGGCCCTTGTCTATAATATTTATACTGTCCTCTTACAACTTCATGTaGATATGCTATAGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: YLLKQTARGPLSIIFILSSYNFM*ICYSCG
Trigger: GCCACAACTATAGCATATCCACATGAAGTTGTAAGA...GGACAGTATAAATATTATAGACAAGGGCCCCCTTGCTGTCTGCTTTAGCAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CCA 90 bp ATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTTACAACTTCATGTaGATATGCTATAGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: IVVAQVFEVAAASIIPTKSYNFM*ICYSCG
Trigger: GCCACAACTATAGCATATCCACATGAAGTTGTAAGA...TTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CCA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCAAAGGCCAAGTAATGTaGTGTGATTACTATAATTCC +
Preference number: 4 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTKGQVM*CDYYNS
Trigger: GGAATTATAGTAATCACACCACATTACTTGGCCTTT...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGACAAGGAAGTTAAAGTaGGGGAATTTAACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKTRKLK*GNLTGH
Trigger: GTGCCCTGTTAAATTCCCCCACTTTAACTTCCTTGT...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACCACAATGAATGTTTATaGGTCTTCACAAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYHNECL*VFTRQM
Trigger: CATTTGCCTTGTGAAGACCCATAAACATTCATTGTG...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp TCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGAAAAACACAATGAATGTTTATaGGTCTTCACAAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: SCTTKSEKTRGHAAVSEKHNECL*VFTRQM
Trigger: CATTTGCCTTGTGAAGACCCATAAACATTCATTGTG...TTTTTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp TATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCATTCTTAATCATTTGTaGGGTACTGAGATCAGTAAG +
Preference number: 4 (lower is better)
Translates to: YAIVVAQVFEVAAASIIPILNHL*GTEISK
Trigger: CTTACTGATCTCAGTACCCCACAAATGATTAAGAAT...GGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTATTAAAACCACTGCATaGTATCCCGAAATCACAAAC +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSIKTTA*YPEITN
Trigger: GTTTGTGATTTCGGGATACCATGCAGTGGTTTTAAT...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACCACACACACACAACTTaGAACACCTGTGCTCAATTT +
Preference number: 4 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNHTHTT*NTCAQF
Trigger: AAATTGAGCACAGGTGTTCCAAGTTGTGTGTGTGTG...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTTGTTCTTACAACATGTaGATATGCTATAGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSCSYNM*ICYSCG
Trigger: GCCACAACTATAGCATATCCACATGTTGTAAGAACA...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446041.6
CDS-3UTR TCA 90 bp GCAGTAAAACCCAAGCTTCTGTCCATAATACTCTTCCAAGTCACAAAAGAATTTAAGCGTCACAGAAGATaGCTGCAGTCGTGTTTTTAC +
Preference number: 4 (lower is better)
Translates to: AVKPKLLSIILFQVTKEFKRHRR*LQSCFY
Trigger: GTAAAAACACGACTGCAGTCATCTTCTGTGACGCTT...AAATTCTTTTGTGACTTGGAAGAGTATTATGGACAGAAGCTTGGGTTTTACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000631654.1
ENST00000648615.1
CDS-3UTR TCA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGAGAGAAAGCTTGCAATaGCACGCTGCAATATTCTAT +
Preference number: 4 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKRESLQ*HAAIFY
Trigger: ATAGAATATTGCAGCGTGTCATTGCAAGCTTTCTCT...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp AGTCATTATATATTTGAGGAGAAAAGGCTGAACTGTACTTATCAGCTCCAAAGGTTGAGGAGAAAAGGCTaGACTGTACTTATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SHYIFEEKRLNCTYQLQRLRRKG*TVLISS
Trigger: GGAGCTGATAAGTACAGTTCAGCCTTTTCTCCTCAA...CCTTTGGAGCTGATAAGTACAGTTCAGCCTTTTCTCCTCAAATATATAATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp TATTTTGTTCCCTCTTCACGTAGTCTTGTTCTTACAACTTCATGTGGATATGCTGATGGAGAAGAGATCTaGGTGGGCAGAAAGTTTGTA +
Preference number: 4 (lower is better)
Translates to: YFVPSSRSLVLTTSCGYADGEEI*VGRKFV
Trigger: TACAAACTTTCTGCCCACTCAGATCTCTTCTCCATC...AGCATATCCACATGAAGTTGTAAGAACAAGACTACGTGAAGAGGGAACAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR TCA 90 bp ATGATATTCTATCCTGACTTCAAAGTTACAAATTCACTGTGGTGGACCCATCTACAAGATAAGGTTTGCTaGCTGAATCAAGCGAGCCTA +
Preference number: 4 (lower is better)
Translates to: MIFYPDFKVTNSLWWTHLQDKVC*LNQASL
Trigger: TAGGCTCGCTTGATTCAGTCAGCAAACCTTATCTTG...TAGATGGGTCCACCACAGTGAATTTGTAACTTTGAAGTCAGGATAGAATATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR TCA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACTGTATTTCACTCTTTTaGCCTTTGGATTGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDCISLF*PLDCPF
Trigger: GAAGGGACAATCCAAAGGTCAAAAGAGTGAAATACA...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR TCA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACGATACCCTCAATAGCTaGGATATACTTAGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDDTLNS*DILSLS
Trigger: TGACAGACTAAGTATATCTCAGCTATTGAGGGTATC...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR GCA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGGTCACAGAAGATGACTaGAGTCGTGTTTTTACAACT +
Preference number: 4 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKVTEDD*SRVFTT
Trigger: AGTTGTAAAAACACGACTGCAGTCATCTTCTGTGAC...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACGTCACAGAAGATGACTaGAGTCGTGTTTTTACAACT +
Preference number: 4 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDVTEDD*SRVFTT
Trigger: AGTTGTAAAAACACGACTGCAGTCATCTTCTGTGAC...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR GCA 90 bp CAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTTCTCATATGAAGCAGACATaGCCCTATAAAATCCTTTTA +
Preference number: 4 (lower is better)
Translates to: QVFEVAAASIIPTKSDASHMKQT*PYKILL
Trigger: TAAAAGGATTTTATAGGGGCATGTCTGCTTCATATG...AGAAGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR GCA 90 bp CACACTAGAACCTTAAGAAATCATGAACTCACAAATTACTTCCCTATCACGGCTACAGCAGAGAAAGCTTaGAATGACACGCTGCAATAT +
Preference number: 4 (lower is better)
Translates to: HTRTLRNHELTNYFPITATAEKA*NDTLQY
Trigger: ATATTGCAGCGTGTCATTGCAAGCTTTCTCTGCTGT...AGCCGTGATAGGGAAGTAATTTGTGAGTTCATGATTTCTTAAGGTTCTAGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR GCA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACAAGATGTTCCTTAGCTaGTGGTTTTCATATCATTCT +
Preference number: 4 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYKMFLS*WFSYHS
Trigger: AGAATGATATGAAAACCAGCAGCTAAGGAACATCTT...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp ATTTTGCCAGTGCCTTCAGTGCAGAGTACTATTAGTAGAACCAACAATTTCAGACCATTATTTTGCCAGTaGCTTCAGTGCAGAGTACTA +
Preference number: 4 (lower is better)
Translates to: ILPVPSVQSTISRTNNFRPLFCQ*LQCRVL
Trigger: TAGTACTCTGCACTGAAGGCACTGGCAAAATAATGG...TCTGAAATTGTTGGTTCTACTAATAGTACTCTGCACTGAAGGCACTGGCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR GCA 90 bp ACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAAACCTTTCACCTTTTaGACTATGGCCAGTAATATT +
Preference number: 4 (lower is better)
Translates to: TSCGYAIVVAQVFEVAAAKPFTF*TMASNI
Trigger: AATATTACTGGCCATAGTGCAAAAGGTGAAAGGTTT...AGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512023.5
CDS-3UTR CCA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTTTACAAACCGGTTTTTaGTACGTTCCTCATAATACA +
Preference number: 4 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSLQTGF*YVPHNT
Trigger: TGTATTATGAGGAACGTACCAAAAACCGGTTTGTAA...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp TACCTGCTAAAGCAGACAGCAAGGGGGCCCTTGTCTATAATATTTATACTGTCCATTCTTAATCATTTGTaGGGTACTGAGATCAGTAAG +
Preference number: 4 (lower is better)
Translates to: YLLKQTARGPLSIIFILSILNHL*GTEISK
Trigger: CTTACTGATCTCAGTACCCCACAAATGATTAAGAAT...GGACAGTATAAATATTATAGACAAGGGCCCCCTTGCTGTCTGCTTTAGCAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp ATTTTGCCAGTGCCTTCAGTGCAGAGTACTATTAGTAGAACCAACAATTTCAGAACAAATTCACTGTGGTaGACCCATCTAGAAAGGATG +
Preference number: 4 (lower is better)
Translates to: ILPVPSVQSTISRTNNFRTNSLW*THLERM
Trigger: CATCCTTTCTAGATGGGTCCACCACAGTGAATTTGT...TCTGAAATTGTTGGTTCTACTAATAGTACTCTGCACTGAAGGCACTGGCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACGAGAAGAGATCTGAGTaGGCAGAAAGTTTGTACATT +
Preference number: 4 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNEKRSE*AESLYI
Trigger: AATGTACAAACTTTCTGCCCACTCAGATCTCTTCTC...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp TTTCGTCCTGGTTTCCTCAAGACTGGACAATGTTTGATGTTAACTACAATACAGGGATTACTTGACCTTTaGGTTCCTTCAGACATCACT +
Preference number: 4 (lower is better)
Translates to: FRPGFLKTGQCLMLTTIQGLLDL*VPSDIT
Trigger: AGTGATGTCTGAAGGAACCCAAAGGTCAAGTAATCC...CTGTATTGTAGTTAACATCAAACATTGTCCAGTCTTGAGGAAACCAGGACGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CCA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACTATAAGGTTTGTCACTaGCCACCAACCTTTACCTTA +
Preference number: 4 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDYKVCH*PPTFTL
Trigger: TAAGGTAAAGGTTGGTGGCCAGTGACAAACCTTATA...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507429.5
3UTR CAA 72 bp TCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTaGTGGGGTACTGAGATCAGTAAGACTAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: SLAAGFHIILNH*WGTEISKTRES
Trigger: ACTCTCCCTAGTCTTACTGATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp TTTTCAATGGAAAATCAAAGTTCGTGGCTTTGTCTAACATGCATAGCAGCAAATAAGCGTCACAGAAGATaGCTGCAGTCGTGTTTTTAC +
Preference number: 4 (lower is better)
Translates to: FSMENQSSWLCLTCIAANKRHRR*LQSCFY
Trigger: GTAAAAACACGACTGCAGTCATCTTCTGTGACGCTT...ATTTGCTGCTATGCATGTTAGACAAAGCCACGAACTTTGATTTTCCATTGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR TCA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGTTTAGTCCATCTGTCTaGTACACTTTACGAACACAT +
Preference number: 4 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKFSPSV*YTLRTH
Trigger: ATGTGTTCGTAAAGTGTATCAGACAGATGGACTAAA...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR TCA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACAATAACTGTATGCTGTaGGCAAATAAAACCCACTAC +
Preference number: 4 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDNNCML*ANKTHY
Trigger: GTAGTGGGTTTTATTTGCTCACAGCATACAGTTATT...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR TCA 90 bp CATGGTAGAGAAAATGGCAATTTTGAGAGAGGAGTGCTTCTAAAGGCATTTCCTAGTCACAAAAGAATTTaGGGGAGGTTTAAGTTAGTC +
Preference number: 4 (lower is better)
Translates to: HGRENGNFERGVLLKAFPSHKRI*GRFKLV
Trigger: GACTAACTTAAACCTCCCTCAAATTCTTTTGTGACT...AGGAAATGCCTTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCTCTACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR GCA 90 bp AAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTTCTTCATATGAAGCAGACATaGCCCTATAAAATCCTTTTA +
Preference number: 4 (lower is better)
Translates to: KFLRWQQLASFPQNLMLLHMKQT*PYKILL
Trigger: TAAAAGGATTTTATAGGGGCATGTCTGCTTCATATG...AAGAAGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR GCA 90 bp TATTTTGTTCCCTCTTCACGTAGTCTTGTTCTTACAACTTCATGTGGATATGCTAAAAAGGCCACAAAGTaGTTTCACGAAGCGTCATTC +
Preference number: 4 (lower is better)
Translates to: YFVPSSRSLVLTTSCGYAKKATK*FHEASF
Trigger: GAATGACGCTTCGTGAAAGCACTTTGTGGCCTTTTT...AGCATATCCACATGAAGTTGTAAGAACAAGACTACGTGAAGAGGGAACAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR GCA 90 bp GAATCTGTCTCACTAGATGAGTTGTCAGACCACGATAAAGAGACCCATAACCTTAAGATGTTCCTTAGCTaGTGGTTTTCATATCATTCT +
Preference number: 4 (lower is better)
Translates to: ESVSLDELSDHDKETHNLKMFLS*WFSYHS
Trigger: AGAATGATATGAAAACCAGCAGCTAAGGAACATCTT...AAGGTTATGGGTCTCTTTATCGTGGTCTGACAACTCATCTAGTGAGACAGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR GCA 90 bp CATGGTAGAGAAAATGGCAATTTTGAGAGAGGAGTGCTTCTAAAGGCATTTCCTAGCCATGTACATAAATaGAAGATACCAAACCTCACA +
Preference number: 4 (lower is better)
Translates to: HGRENGNFERGVLLKAFPSHVHK*KIPNLT
Trigger: TGTGAGGTTTGGTATCTTGCATTTATGTACATGGCT...AGGAAATGCCTTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCTCTACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACTCTTACAACTTCATGTaGATATGCTATAGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNSYNFM*ICYSCG
Trigger: GCCACAACTATAGCATATCCACATGAAGTTGTAAGA...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CCA 90 bp TTTCGTCCTGGTTTCCTCAAGACTGGACAATGTTTGATGTTAACTACAATACAGAGCACCTGTCAGCAGTaGAAACCAAAACATTTTGAT +
Preference number: 4 (lower is better)
Translates to: FRPGFLKTGQCLMLTTIQSTCQQ*KPKHFD
Trigger: ATCAAAATGTTTTGGTTTCCACTGCTGACAGGTGCT...CTGTATTGTAGTTAACATCAAACATTGTCCAGTCTTGAGGAAACCAGGACGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CCA 90 bp TCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTTGTGGGGTACTGAGATCGAGAAGAGATCTGAGTaGGCAGAAAGTTTGTACATT +
Preference number: 4 (lower is better)
Translates to: SLAAGFHIILNHLWGTEIEKRSE*AESLYI
Trigger: AATGTACAAACTTTCTGCCCACTCAGATCTCTTCTC...GATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp CATGGTAGAGAAAATGGCAATTTTGAGAGAGGAGTGCTTCTAAAGGCATTTCCTAAATATATTTCGTCCTaGTTTCCTCAAGACTGGACA +
Preference number: 4 (lower is better)
Translates to: HGRENGNFERGVLLKAFPKYISS*FPQDWT
Trigger: TGTCCAGTCTTGAGGAAACCAGGACGAAATATATTT...AGGAAATGCCTTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCTCTACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR CAA 72 bp AAGATTTCTTTGTACACTATGAGGGAGTTGGATTACTaGACCTTTGGGTTCCTTCAGACATCACTAGATCTA +
Preference number: 4 (lower is better)
Translates to: KISLYTMRELDY*TFGFLQTSLDL
Trigger: TAGATCTAGTGATGTCTGAAGGAACCCAAAGGTCAAGTAATCCAACTCCCTCATAGTGTACAAAGAAATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR CAA 72 bp AAGATATGCAAGATTTCTTTGTACACTATGAGGGAGTaGGATTACTTGACCTTTGGGTTCCTTCAGACATCA +
Preference number: 4 (lower is better)
Translates to: KICKISLYTMRE*DYLTFGFLQTS
Trigger: TGATGTCTGAAGGAACCCAAAGGTCAAGTAATCCAACTCCCTCATAGTGTACAAAGAAATCTTGCATATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR CAA 72 bp AACTTGGAACACCTGTGCTCAATTTTAACCATTATTTaGCCAGTGCCTTCAGTGCAGAGTACTATTAGTAGA +
Preference number: 4 (lower is better)
Translates to: NLEHLCSILTII*PVPSVQSTISR
Trigger: TCTACTAATAGTACTCTGCACTGAAGGCACTGGCAAAATAATGGTTAAAATTGAGCACAGGTGTTCCAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
3UTR CAA 72 bp GAACTAATTCTCAAAATCCAAATCTATGTAGACCACTaGACTCATTCCATGGGTAAGCTAAGAGAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: ELILKIQIYVDH*THSMGKLREVH
Trigger: GTGAACCTCTCTTAGCTTACCCATGGAATGAGTCAAGTGGTCTACATAGATTTGGATTTTGAGAATTAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR TCA 90 bp CTTTTAGTCCATCTGTCTGATACACTTTACGAACACATTCAAAAGCACCCATTCTTTAGTCCATCTGTCTaGTACACTTTACGAACACAT +
Preference number: 4 (lower is better)
Translates to: LLVHLSDTLYEHIQKHPFFSPSV*YTLRTH
Trigger: ATGTGTTCGTAAAGTGTATCAGACAGATGGACTAAA...GAATGGGTGCTTTTGAATGTGTTCGTAAAGTGTATCAGACAGATGGACTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR TCA 90 bp ATTTTGCCAGTGCCTTCAGTGCAGAGTACTATTAGTAGAACCAACAATTTCAGACCCAGAAAAATGTTATaGACACTGTTTCTGCCTAAT +
Preference number: 4 (lower is better)
Translates to: ILPVPSVQSTISRTNNFRPRKML*TLFLPN
Trigger: ATTAGGCAGAAACAGTGTTCATAACATTTTTCTGGG...TCTGAAATTGTTGGTTCTACTAATAGTACTCTGCACTGAAGGCACTGGCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR TCA 90 bp ATGATATTCTATCCTGACTTCAAAGTTACAAATTCACTGTGGTGGACCCATCTAAGAGAAAGCTTGCAATaGCACGCTGCAATATTCTAT +
Preference number: 4 (lower is better)
Translates to: MIFYPDFKVTNSLWWTHLRESLQ*HAAIFY
Trigger: ATAGAATATTGCAGCGTGTCATTGCAAGCTTTCTCT...TAGATGGGTCCACCACAGTGAATTTGTAACTTTGAAGTCAGGATAGAATATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp GCAGTAAAACCCAAGCTTCTGTCCATAATACTCTTCCAAGTCACAAAAGAATTTGTCACAGAAGATGACTaGAGTCGTGTTTTTACAACT +
Preference number: 4 (lower is better)
Translates to: AVKPKLLSIILFQVTKEFVTEDD*SRVFTT
Trigger: AGTTGTAAAAACACGACTGCAGTCATCTTCTGTGAC...AAATTCTTTTGTGACTTGGAAGAGTATTATGGACAGAAGCTTGGGTTTTACTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000631654.1
ENST00000648615.1
CDS-3UTR GCA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGCATATGAAGCAGACATaGCCCTATAAAATCCTTTTA +
Preference number: 4 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKHMKQT*PYKILL
Trigger: TAAAAGGATTTTATAGGGGCATGTCTGCTTCATATG...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp ATGATATTCTATCCTGACTTCAAAGTTACAAATTCACTGTGGTGGACCCATCTATATTTTTCTTCTGTCTaGCATGCTGGCTTCTGTATC +
Preference number: 4 (lower is better)
Translates to: MIFYPDFKVTNSLWWTHLYFSSV*HAGFCI
Trigger: GATACAGAAGCCAGCATGGCAGACAGAAGAAAAATA...TAGATGGGTCCACCACAGTGAATTTGTAACTTTGAAGTCAGGATAGAATATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACAAATTTAAAATATTGTaGCAGGTCCTCTCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNKFKIL*QVLSGK
Trigger: TTTCCCTGAGAGGACCTGGCACAATATTTTAAATTT...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR GCA 90 bp CACACTAGAACCTTAAGAAATCATGAACTCACAAATTACTTCCCTATCACGGCTTATGAACACTGTTTCTaGCTAATACGTGACCAATGT +
Preference number: 4 (lower is better)
Translates to: HTRTLRNHELTNYFPITAYEHCF*LIRDQC
Trigger: ACATTGGTCACGTATTAGGCAGAAACAGTGTTCATA...AGCCGTGATAGGGAAGTAATTTGTGAGTTCATGATTTCTTAAGGTTCTAGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CCA 90 bp GTTCTTACAACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGTCTTACAACTTCATGTaGATATGCTATAGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: VLTTSCGYAIVVAQVFEVSYNFM*ICYSCG
Trigger: GCCACAACTATAGCATATCCACATGAAGTTGTAAGA...CACCTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGTTGTAAGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CCA 90 bp ATGATATTCTATCCTGACTTCAAAGTTACAAATTCACTGTGGTGGACCCATCTAAGCACCTGTCAGCAGTaGAAACCAAAACATTTTGAT +
Preference number: 4 (lower is better)
Translates to: MIFYPDFKVTNSLWWTHLSTCQQ*KPKHFD
Trigger: ATCAAAATGTTTTGGTTTCCACTGCTGACAGGTGCT...TAGATGGGTCCACCACAGTGAATTTGTAACTTTGAAGTCAGGATAGAATATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp CATGGTAGAGAAAATGGCAATTTTGAGAGAGGAGTGCTTCTAAAGGCATTTCCTTTTTATACACCAGTATaGCATAGGCGAAGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: HGRENGNFERGVLLKAFPFYTPV*HRRSLL
Trigger: TAAAAGACTTCGCCTATGCCATACTGGTGTATAAAA...AGGAAATGCCTTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCTCTACCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACATTCTTAATCATTTGTaGGGTACTGAGATCAGTAAG +
Preference number: 4 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNILNHL*GTEISK
Trigger: CTTACTGATCTCAGTACCCCACAAATGATTAAGAAT...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp CACACTAGAACCTTAAGAAATCATGAACTCACAAATTACTTCCCTATCACGGCTATTAAAACCACTGCATaGTATCCCGAAATCACAAAC +
Preference number: 4 (lower is better)
Translates to: HTRTLRNHELTNYFPITAIKTTA*YPEITN
Trigger: GTTTGTGATTTCGGGATACCATGCAGTGGTTTTAAT...AGCCGTGATAGGGAAGTAATTTGTGAGTTCATGATTTCTTAAGGTTCTAGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR TCA 90 bp TATTTTGTTCCCTCTTCACGTAGTCTTGTTCTTACAACTTCATGTGGATATGCTGAAATACTAAGTACATaGTGGAGAAGAGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: YFVPSSRSLVLTTSCGYAEILST*WRRDLS
Trigger: ACTCAGATCTCTTCTCCATCATGTACTTAGTATTTC...AGCATATCCACATGAAGTTGTAAGAACAAGACTACGTGAAGAGGGAACAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR GCA 90 bp AGTCTTGTTCTTACAACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGTCACAGAAGATGACTaGAGTCGTGTTTTTACAACT +
Preference number: 4 (lower is better)
Translates to: SLVLTTSCGYAIVVAQVFVTEDD*SRVFTT
Trigger: AGTTGTAAAAACACGACTGCAGTCATCTTCTGTGAC...AAAAACTTGTGCCACAACTATAGCATATCCACATGAAGTTGTAAGAACAAGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000648615.1
CDS-3UTR GCA 90 bp TTTCGTCCTGGTTTCCTCAAGACTGGACAATGTTTGATGTTAACTACAATACAGCATATGAAGCAGACATaGCCCTATAAAATCCTTTTA +
Preference number: 4 (lower is better)
Translates to: FRPGFLKTGQCLMLTTIQHMKQT*PYKILL
Trigger: TAAAAGGATTTTATAGGGGCATGTCTGCTTCATATG...CTGTATTGTAGTTAACATCAAACATTGTCCAGTCTTGAGGAAACCAGGACGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR GCA 90 bp ATTTTGCCAGTGCCTTCAGTGCAGAGTACTATTAGTAGAACCAACAATTTCAGAAAATTTAAAATATTGTaGCAGGTCCTCTCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: ILPVPSVQSTISRTNNFRKFKIL*QVLSGK
Trigger: TTTCCCTGAGAGGACCTGGCACAATATTTTAAATTT...TCTGAAATTGTTGGTTCTACTAATAGTACTCTGCACTGAAGGCACTGGCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR GCA 90 bp ATGATATTCTATCCTGACTTCAAAGTTACAAATTCACTGTGGTGGACCCATCTATACAACATGTGGATATaGTATAGTTGTGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: MIFYPDFKVTNSLWWTHLYNMWI*YSCGTS
Trigger: ACTTGTGCCACAACTATAGCATATCCACATGTTGTA...TAGATGGGTCCACCACAGTGAATTTGTAACTTTGAAGTCAGGATAGAATATCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446041.6
CDS-3UTR GCA 90 bp TTTTCAATGGAAAATCAAAGTTCGTGGCTTTGTCTAACATGCATAGCAGCAAATTGGCTTTGTCTAACATaGATAGCAGCAAATGATTCC +
Preference number: 4 (lower is better)
Translates to: FSMENQSSWLCLTCIAANWLCLT*IAANDS
Trigger: GGAATCATTTGCTGCTATGCATGTTAGACAAAGCCA...ATTTGCTGCTATGCATGTTAGACAAAGCCACGAACTTTGATTTTCCATTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR CCA 90 bp TTTTCAATGGAAAATCAAAGTTCGTGGCTTTGTCTAACATGCATAGCAGCAAATTTTTACAACTTCCAGTaGACATGTCAGAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: FSMENQSSWLCLTCIAANFYNFQ*TCQNSS
Trigger: GGAGCTATTCTGACATGTCCACTGGAAGTTGTAAAA...ATTTGCTGCTATGCATGTTAGACAAAGCCACGAACTTTGATTTTCCATTGAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR CCA 90 bp TCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTTGTGGGGTACTGAGATCAAAGGCCAAGTAATGTaGTGTGATTACTATAATTCC +
Preference number: 4 (lower is better)
Translates to: SLAAGFHIILNHLWGTEIKGQVM*CDYYNS
Trigger: GGAATTATAGTAATCACACCACATTACTTGGCCTTT...GATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CCA 90 bp CACACTAGAACCTTAAGAAATCATGAACTCACAAATTACTTCCCTATCACGGCTTTACAAACCGGTTTTTaGTACGTTCCTCATAATACA +
Preference number: 4 (lower is better)
Translates to: HTRTLRNHELTNYFPITALQTGF*YVPHNT
Trigger: TGTATTATGAGGAACGTACCAAAAACCGGTTTGTAA...AGCCGTGATAGGGAAGTAATTTGTGAGTTCATGATTTCTTAAGGTTCTAGTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR GCA 90 bp AGTCTTGTTCTTACAACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTAACTTCATGTGGATATaGTATAGTTGTGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: SLVLTTSCGYAIVVAQVFNFMWI*YSCGTS
Trigger: ACTTGTGCCACAACTATAGCATATCCACATGAAGTT...AAAAACTTGTGCCACAACTATAGCATATCCACATGAAGTTGTAAGAACAAGACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CCA 90 bp TTTTCAATGGAAAATCAAAGTTCGTGGCTTTGTCTAACATGCATAGCAGCAAATATTCCAGAACCAGATTaGTCAAACCAACTGTTTATC +
Preference number: 4 (lower is better)
Translates to: FSMENQSSWLCLTCIAANIPEPD*SNQLFI
Trigger: GATAAACAGTTGGTTTGACCAATCTGGTTCTGGAAT...ATTTGCTGCTATGCATGTTAGACAAAGCCACGAACTTTGATTTTCCATTGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507429.5
3UTR CAA 72 bp AAGTCAATAAACCTGTGGAAGATATGCAAGATTTCTTaGTACACTATGAGGGAGTTGGATTACTTGACCTTT +
Preference number: 4 (lower is better)
Translates to: KSINLWKICKIS*YTMRELDYLTF
Trigger: AAAGGTCAAGTAATCCAACTCCCTCATAGTGTACAAAGAAATCTTGCATATCTTCCACAGGTTTATTGACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CCA 90 bp AGTCTTGTTCTTACAACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTAAAGGCCAAGTAATGTaGTGTGATTACTATAATTCC +
Preference number: 4 (lower is better)
Translates to: SLVLTTSCGYAIVVAQVFKGQVM*CDYYNS
Trigger: GGAATTATAGTAATCACACCACATTACTTGGCCTTT...AAAAACTTGTGCCACAACTATAGCATATCCACATGAAGTTGTAAGAACAAGACT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CCA 90 bp TTTTCAATGGAAAATCAAAGTTCGTGGCTTTGTCTAACATGCATAGCAGCAAATGAAAATCAAAGTTCGTaGCTTTGTCTAACATGCATA +
Preference number: 4 (lower is better)
Translates to: FSMENQSSWLCLTCIAANENQSS*LCLTCI
Trigger: TATGCATGTTAGACAAAGCCACGAACTTTGATTTTC...ATTTGCTGCTATGCATGTTAGACAAAGCCACGAACTTTGATTTTCCATTGAAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR CCA 90 bp TTTTCAATGGAAAATCAAAGTTCGTGGCTTTGTCTAACATGCATAGCAGCAAATAAACCCCGAGTAATCTaGTCTAGATTATTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: FSMENQSSWLCLTCIAANKPRVI*SRLFQE
Trigger: TTCTTGAAATAATCTAGACCAGATTACTCGGGGTTT...ATTTGCTGCTATGCATGTTAGACAAAGCCACGAACTTTGATTTTCCATTGAAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS TCA 90 bp CGTGTCCCTCTGGCTCATTCTCTCTCCCGCATGTCCTCCGGCCGCTaGGGCGGGACGCGGATCTGGCCGCCCGCTACGGCAGGCGGCTTC +
Preference number: 5 (lower is better)
Translates to: RVPLAHSLSRMSSGR*GGTRIWPPATAGGF
Trigger: GAAGCCGCCTGCCGTAGCGGGCGGCCAGATCCGCGTCCCGCCTCAGCGGCCGGAGGACATGCGGGAGAGAGAATGAGCCAGAGGGACACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324194.12
ENST00000393015.8
ENST00000446041.6
ENST00000453248.6
ENST00000502594.5
ENST00000502756.1
ENST00000507429.5
ENST00000515813.1
ENST00000648615.1
CDS TCA 90 bp AAAGCCGAGCCCGGAAATGAGCGGCCCGAGGTCCGAGGTGGGGCGTaGGTGACGTGCAGAGGCCCAAGCGAGCGCTGCAAGGAGCGAGGG +
Preference number: 5 (lower is better)
Translates to: KAEPGNERPEVRGGA*VTCRGPSERCKERG
Trigger: CCCTCGCTCCTTGCAGCGCTCGCTTGGGCCTCTGCACGTCACTCACGCCCCACCTCGGACCTCGGGCCGCTCATTTCCGGGCTCGGCTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513887.5
CDS-3UTR CAA 90 bp AACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGGGAGACACTACTCGGTaGACACTGGCTCCAGCCATG +
Preference number: 5 (lower is better)
Translates to: NTFKSTHSPFPAVPCIKLGDTTR*TLAPAM
Trigger: CATGGCTGGAGCCAGTGTCAACCGAGTAGTGTCTCC...CAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CAA 90 bp CACTTTACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCCACACCGGCGTCCAATaGCGGCAGTTTTTATACACC +
Preference number: 5 (lower is better)
Translates to: HFTNTFKSTHSPFPAVPCHTGVQ*RQFLYT
Trigger: GGTGTATAAAAACTGCCGCAATTGGACGCCGGTGTG...GCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CAA 90 bp GCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTGGAGACACTACTCGGTaGACACTGGCTCCAGCCATG +
Preference number: 5 (lower is better)
Translates to: AQVFEVAAASIIPTKSDAGDTTR*TLAPAM
Trigger: CATGGCTGGAGCCAGTGTCAACCGAGTAGTGTCTCC...AGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CAA 90 bp TTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGGGAGACACTACTCGGTaGACACTGGCTCCAGCCATG +
Preference number: 5 (lower is better)
Translates to: LWHKFLRWQQLASFPQNLGDTTR*TLAPAM
Trigger: CATGGCTGGAGCCAGTGTCAACCGAGTAGTGTCTCC...CAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CAA 90 bp CGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAAAAGCAGCAAAGTATATaGCTCTGGAAGGGGCTACCC +
Preference number: 5 (lower is better)
Translates to: RLSPRFLASSCNRVFISQKQQSI*LWKGLP
Trigger: GGGTAGCCCCTTCCAGAGCAATATACTTTGCTGCTT...TTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000631654.1
ENST00000648615.1
CDS-3UTR CAA 90 bp CTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAAATGTTTCCCCGCGGTTCCTaGCATCAAGCTGTAACCGAG +
Preference number: 5 (lower is better)
Translates to: LSPRFLASSCNRVFISQMFPRGS*HQAVTE
Trigger: CTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAA...CATTTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000631654.1
ENST00000648615.1
CDS-3UTR CAA 90 bp CACTTTACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCTTGTGGCACAAGTTTTaGAGGTGGCAGCAGCTAGCA +
Preference number: 5 (lower is better)
Translates to: HFTNTFKSTHSPFPAVPCLWHKF*RWQQLA
Trigger: TGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAA...GCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CAA 90 bp CAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGACACACACACACAACTaGGAACACCTGTGCTCAATT +
Preference number: 5 (lower is better)
Translates to: QKHPFAFPRGSLHQAVTETHTHN*EHLCSI
Trigger: AATTGAGCACAGGTGTTCCAAGTTGTGTGTGTGTGT...CTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CAA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACCTGAGGCAGAATCGCTaGAACCCGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYLRQNR*NPGGRG
Trigger: ACCTCTGCCTCCCGGGTTCAAGCGATTCTGCCTCAG...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CAA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGGAGACACTACTCGGTaGACACTGGCTCCAGCCATG +
Preference number: 5 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSGDTTR*TLAPAM
Trigger: CATGGCTGGAGCCAGTGTCAACCGAGTAGTGTCTCC...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp CTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAAATGGCTACCCCCACTAAATaGGGGCCTAGTCCTCTAAAC +
Preference number: 5 (lower is better)
Translates to: LSPRFLASSCNRVFISQMATPTK*GPSPLN
Trigger: GTTTAGAGGACTAGGCCCCAATTTAGTGGGGGTAGC...CATTTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000631654.1
ENST00000648615.1
CDS-3UTR CAA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCTTTCCCCGCGGTTCCTaGCATCAAGCTGTAACCGAG +
Preference number: 5 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTFPRGS*HQAVTE
Trigger: CTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAA...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp GAATCTGTCTCACTAGATGAGTTGTCAGACCACGATAAAGAGACCCATAACCTTCTGAGGCAGAATCGCTaGAACCCGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: ESVSLDELSDHDKETHNLLRQNR*NPGGRG
Trigger: ACCTCTGCCTCCCGGGTTCAAGCGATTCTGCCTCAG...AAGGTTATGGGTCTCTTTATCGTGGTCTGACAACTCATCTAGTGAGACAGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CAA 90 bp GCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTGCTACCCCCACTAAATaGGGGCCTAGTCCTCTAAAC +
Preference number: 5 (lower is better)
Translates to: AQVFEVAAASIIPTKSDAATPTK*GPSPLN
Trigger: GTTTAGAGGACTAGGCCCCAATTTAGTGGGGGTAGC...AGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CAA 90 bp CGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAAATAAGCCAAATGGGGTaGGTTGCTGTGATTGCAGTA +
Preference number: 5 (lower is better)
Translates to: RLSPRFLASSCNRVFISQISQMG*VAVIAV
Trigger: TACTGCAATCACAGCAACCAACCCCATTTGGCTTAT...TTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000631654.1
ENST00000648615.1
CDS-3UTR CAA 90 bp TACCTGCTAAAGCAGACAGCAAGGGGGCCCTTGTCTATAATATTTATACTGTCCTTTCCCCGCGGTTCCTaGCATCAAGCTGTAACCGAG +
Preference number: 5 (lower is better)
Translates to: YLLKQTARGPLSIIFILSFPRGS*HQAVTE
Trigger: CTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAA...GGACAGTATAAATATTATAGACAAGGGCCCCCTTGCTGTCTGCTTTAGCAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp GGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTTTTCCCCGCGGTTCCTaGCATCAAGCTGTAACCGAG +
Preference number: 5 (lower is better)
Translates to: GYAIVVAQVFEVAAASIIFPRGS*HQAVTE
Trigger: CTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAA...AATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CAA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCCACACCGGCGTCCAATaGCGGCAGTTTTTATACACC +
Preference number: 5 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTHTGVQ*RQFLYT
Trigger: GGTGTATAAAAACTGCCGCAATTGGACGCCGGTGTG...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACGGAGACACTACTCGGTaGACACTGGCTCCAGCCATG +
Preference number: 5 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDGDTTR*TLAPAM
Trigger: CATGGCTGGAGCCAGTGTCAACCGAGTAGTGTCTCC...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR CAA 90 bp TACCTGCTAAAGCAGACAGCAAGGGGGCCCTTGTCTATAATATTTATACTGTCCGCTACCCCCACTAAATaGGGGCCTAGTCCTCTAAAC +
Preference number: 5 (lower is better)
Translates to: YLLKQTARGPLSIIFILSATPTK*GPSPLN
Trigger: GTTTAGAGGACTAGGCCCCAATTTAGTGGGGGTAGC...GGACAGTATAAATATTATAGACAAGGGCCCCCTTGCTGTCTGCTTTAGCAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCAAGCAGCAAAGTATATaGCTCTGGAAGGGGCTACCC +
Preference number: 5 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTKQQSI*LWKGLP
Trigger: GGGTAGCCCCTTCCAGAGCAATATACTTTGCTGCTT...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp TGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGAAGCAGCAAAGTATATaGCTCTGGAAGGGGCTACCC +
Preference number: 5 (lower is better)
Translates to: WHKFLRWQQLASFPQNLMKQQSI*LWKGLP
Trigger: GGGTAGCCCCTTCCAGAGCAATATACTTTGCTGCTT...CATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CAA 90 bp AAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTTCTTTTTCCCCGCGGTTCCTaGCATCAAGCTGTAACCGAG +
Preference number: 5 (lower is better)
Translates to: KFLRWQQLASFPQNLMLLFPRGS*HQAVTE
Trigger: CTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAA...AAGAAGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CAA 90 bp ATTCGCCTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCGTCTCACTAGATGAGTaGTCAGACCACGATAAAGAG +
Preference number: 5 (lower is better)
Translates to: IRLSPRFLASSCNRVFISVSLDE*SDHDKE
Trigger: CTCTTTATCGTGGTCTGACAACTCATCTAGTGAGAC...GCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAGGCGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS TCA 90 bp GTCCATATTTCTACAGGAAGTGACCTGCGGATGGGGAGCATGAGATaGCACGATCTCACTCTTTTCTCGGGAGAAATGTACAGTAAATGC +
Preference number: 5 (lower is better)
Translates to: VHISTGSDLRMGSMR*HDLTLFSGEMYSKC
Trigger: GCATTTACTGTACATTTCTCCCGAGAAAAGAGTGAGATCGTGTCATCTCATGCTCCCCATCCGCAGGTCACTTCCTGTAGAAATATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502866.1
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CAA 90 bp TCTGTCTCACTAGATGAGTTGTCAGACCACGATAAAGAGACCCATAACCTTCTTGCTACCCCCACTAAATaGGGGCCTAGTCCTCTAAAC +
Preference number: 5 (lower is better)
Translates to: SVSLDELSDHDKETHNLLATPTK*GPSPLN
Trigger: GTTTAGAGGACTAGGCCCCAATTTAGTGGGGGTAGC...AAGAAGGTTATGGGTCTCTTTATCGTGGTCTGACAACTCATCTAGTGAGACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR CAA 90 bp GGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTAAGCAGCAAAGTATATaGCTCTGGAAGGGGCTACCC +
Preference number: 5 (lower is better)
Translates to: GYAIVVAQVFEVAAASIIKQQSI*LWKGLP
Trigger: GGGTAGCCCCTTCCAGAGCAATATACTTTGCTGCTT...AATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CAA 90 bp ACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAAGCAGCAAAGTATATaGCTCTGGAAGGGGCTACCC +
Preference number: 5 (lower is better)
Translates to: TSCGYAIVVAQVFEVAAAKQQSI*LWKGLP
Trigger: GGGTAGCCCCTTCCAGAGCAATATACTTTGCTGCTT...AGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CAA 90 bp TACCTGCTAAAGCAGACAGCAAGGGGGCCCTTGTCTATAATATTTATACTGTCCAAGCAGCAAAGTATATaGCTCTGGAAGGGGCTACCC +
Preference number: 5 (lower is better)
Translates to: YLLKQTARGPLSIIFILSKQQSI*LWKGLP
Trigger: GGGTAGCCCCTTCCAGAGCAATATACTTTGCTGCTT...GGACAGTATAAATATTATAGACAAGGGCCCCCTTGCTGTCTGCTTTAGCAGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp ATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATTGTGGCACAAGTTTTaGAGGTGGCAGCAGCTAGCA +
Preference number: 5 (lower is better)
Translates to: IVVAQVFEVAAASIIPTKLWHKF*RWQQLA
Trigger: TGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAA...TTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CAA 90 bp GCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTAGGGAGTTGGATTACTaGACCTTTGGGTTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: AQVFEVAAASIIPTKSDARELDY*TFGFLQ
Trigger: CTGAAGGAACCCAAAGGTCAAGTAATCCAACTCCCT...AGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CAA 90 bp CTTTCCCCGCGGTTCCTTGCATCAAGCTGTAACCGAGTCTTTATAAGCCAAATGGGAAGTGACCTGCCATaGCAGCTGAAATCATATGTA +
Preference number: 5 (lower is better)
Translates to: LSPRFLASSCNRVFISQMGSDLP*QLKSYV
Trigger: TACATATGATTTCAGCTGCAATGGCAGGTCACTTCC...CATTTGGCTTATAAAGACTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000631654.1
CDS-3UTR CAA 90 bp CATGGTAGAGAAAATGGCAATTTTGAGAGAGGAGTGCTTCTAAAGGCATTTCCTGCTACCCCCACTAAATaGGGGCCTAGTCCTCTAAAC +
Preference number: 5 (lower is better)
Translates to: HGRENGNFERGVLLKAFPATPTK*GPSPLN
Trigger: GTTTAGAGGACTAGGCCCCAATTTAGTGGGGGTAGC...AGGAAATGCCTTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCTCTACCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACGCTACCCCCACTAAATaGGGGCCTAGTCCTCTAAAC +
Preference number: 5 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDATPTK*GPSPLN
Trigger: GTTTAGAGGACTAGGCCCCAATTTAGTGGGGGTAGC...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR CAA 90 bp ATTTTGCCAGTGCCTTCAGTGCAGAGTACTATTAGTAGAACCAACAATTTCAGATTTCCCCGCGGTTCCTaGCATCAAGCTGTAACCGAG +
Preference number: 5 (lower is better)
Translates to: ILPVPSVQSTISRTNNFRFPRGS*HQAVTE
Trigger: CTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAA...TCTGAAATTGTTGGTTCTACTAATAGTACTCTGCACTGAAGGCACTGGCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CAA 90 bp TCTGTCTCACTAGATGAGTTGTCAGACCACGATAAAGAGACCCATAACCTTCTTTTGTGGCACAAGTTTTaGAGGTGGCAGCAGCTAGCA +
Preference number: 5 (lower is better)
Translates to: SVSLDELSDHDKETHNLLLWHKF*RWQQLA
Trigger: TGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAA...AAGAAGGTTATGGGTCTCTTTATCGTGGTCTGACAACTCATCTAGTGAGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR CAA 90 bp TTAGTCCATCTGTCTGATACACTTTACGAACACATTCAAAAGCACCCATTCGCCTTGTGGCACAAGTTTTaGAGGTGGCAGCAGCTAGCA +
Preference number: 5 (lower is better)
Translates to: LVHLSDTLYEHIQKHPFALWHKF*RWQQLA
Trigger: TGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAA...GGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTGTATCAGACAGATGGACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CAA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCGTCTCACTAGATGAGTaGTCAGACCACGATAAAGAG +
Preference number: 5 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTVSLDE*SDHDKE
Trigger: CTCTTTATCGTGGTCTGACAACTCATCTAGTGAGAC...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp CACTTTACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCTTAGACGCTATTTCATaGGTTGTCAAAAACAGTGAC +
Preference number: 5 (lower is better)
Translates to: HFTNTFKSTHSPFPAVPCLDAIS*VVKNSD
Trigger: GTCACTGTTTTTGACAACCAATGAAATAGCGTCTAA...GCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CAA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTAGGGAGTTGGATTACTaGACCTTTGGGTTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSRELDY*TFGFLQ
Trigger: CTGAAGGAACCCAAAGGTCAAGTAATCCAACTCCCT...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CAA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGAAGCAGCAAAGTATATaGCTCTGGAAGGGGCTACCC +
Preference number: 5 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKKQQSI*LWKGLP
Trigger: GGGTAGCCCCTTCCAGAGCAATATACTTTGCTGCTT...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACAAGCAGCAAAGTATATaGCTCTGGAAGGGGCTACCC +
Preference number: 5 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDKQQSI*LWKGLP
Trigger: GGGTAGCCCCTTCCAGAGCAATATACTTTGCTGCTT...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR CAA 90 bp CTTGTTCTTACAACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGTTTCCCCGCGGTTCCTaGCATCAAGCTGTAACCGAG +
Preference number: 5 (lower is better)
Translates to: LVLTTSCGYAIVVAQVFEFPRGS*HQAVTE
Trigger: CTCGGTTACAGCTTGATGCAAGGAACCGCGGGGAAA...CTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGTTGTAAGAACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CAA 90 bp CATGGTAGAGAAAATGGCAATTTTGAGAGAGGAGTGCTTCTAAAGGCATTTCCTTTGTGGCACAAGTTTTaGAGGTGGCAGCAGCTAGCA +
Preference number: 5 (lower is better)
Translates to: HGRENGNFERGVLLKAFPLWHKF*RWQQLA
Trigger: TGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAA...AGGAAATGCCTTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCTCTACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp CTTTACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATAAAAAGATCTGTATTTaGTTCCCTCTTCACGTAGTC +
Preference number: 5 (lower is better)
Translates to: LYEHIQKHPFAFPRGSLHKKICI*FPLHVV
Trigger: GACTACGTGAAGAGGGAACAAAATACAGATCTTTTT...ATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR CAA 90 bp TCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGAAAAAGTCTCACTAGATGAGTaGTCAGACCACGATAAAGAG +
Preference number: 5 (lower is better)
Translates to: SCTTKSEKTRGHAAVSEKVSLDE*SDHDKE
Trigger: CTCTTTATCGTGGTCTGACAACTCATCTAGTGAGAC...TTTTTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp CTTTACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATACGCTATTTCATTGGTaGTCAAAAACAGTGACTACT +
Preference number: 5 (lower is better)
Translates to: LYEHIQKHPFAFPRGSLHTLFHW*SKTVTT
Trigger: AGTAGTCACTGTTTTTGACAACCAATGAAATAGCGT...ATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CAA 90 bp CACACTAGAACCTTAAGAAATCATGAACTCACAAATTACTTCCCTATCACGGCTCACACCGGCGTCCAATaGCGGCAGTTTTTATACACC +
Preference number: 5 (lower is better)
Translates to: HTRTLRNHELTNYFPITAHTGVQ*RQFLYT
Trigger: GGTGTATAAAAACTGCCGCAATTGGACGCCGGTGTG...AGCCGTGATAGGGAAGTAATTTGTGAGTTCATGATTTCTTAAGGTTCTAGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CAA 90 bp TCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGAAAAATACACTATGAGGGAGTaGGATTACTTGACCTTTGGG +
Preference number: 5 (lower is better)
Translates to: SCTTKSEKTRGHAAVSEKYTMRE*DYLTFG
Trigger: CCCAAAGGTCAAGTAATCCAACTCCCTCATAGTGTA...TTTTTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CAA 90 bp TACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTGCATCAAATATGCAAGATTTCTTaGTACACTATGAGGGAGTTG +
Preference number: 5 (lower is better)
Translates to: YEHIQKHPFAFPRGSLHQICKIS*YTMREL
Trigger: CAACTCCCTCATAGTGTACAAAGAAATCTTGCATAT...TTGATGCAAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CAA 90 bp TACACTTTACGAACACATTCAAAAGCACCCATTCGCCTTTCCCCGCGGTTCCTTATTTTAACCATTATTTaGCCAGTGCCTTCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: YTLRTHSKAPIRLSPRFLILTII*PVPSVQ
Trigger: CTGCACTGAAGGCACTGGCAAAATAATGGTTAAAAT...AAGGAACCGCGGGGAAAGGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CAA 90 bp TTTCGTCCTGGTTTCCTCAAGACTGGACAATGTTTGATGTTAACTACAATACAGCCTGAGATCATGTCATaGCACTCCAGCATGGGTGAC +
Preference number: 5 (lower is better)
Translates to: FRPGFLKTGQCLMLTTIQPEIMS*HSSMGD
Trigger: GTCACCCATGCTGGAGTGCAATGACATGATCTCAGG...CTGTATTGTAGTTAACATCAAACATTGTCCAGTCTTGAGGAAACCAGGACGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CAA 90 bp GCAGTAAAACCCAAGCTTCTGTCCATAATACTCTTCCAAGTCACAAAAGAATTTGCTACCCCCACTAAATaGGGGCCTAGTCCTCTAAAC +
Preference number: 5 (lower is better)
Translates to: AVKPKLLSIILFQVTKEFATPTK*GPSPLN
Trigger: GTTTAGAGGACTAGGCCCCAATTTAGTGGGGGTAGC...AAATTCTTTTGTGACTTGGAAGAGTATTATGGACAGAAGCTTGGGTTTTACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000631654.1
ENST00000648615.1
CDS-3UTR CAA 90 bp TCTGTCTCACTAGATGAGTTGTCAGACCACGATAAAGAGACCCATAACCTTCTTATAAGCCAAATGGGGTaGGTTGCTGTGATTGCAGTA +
Preference number: 5 (lower is better)
Translates to: SVSLDELSDHDKETHNLLISQMG*VAVIAV
Trigger: TACTGCAATCACAGCAACCAACCCCATTTGGCTTAT...AAGAAGGTTATGGGTCTCTTTATCGTGGTCTGACAACTCATCTAGTGAGACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR CAA 90 bp AAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTTCTTATAAGCCAAATGGGGTaGGTTGCTGTGATTGCAGTA +
Preference number: 5 (lower is better)
Translates to: KFLRWQQLASFPQNLMLLISQMG*VAVIAV
Trigger: TACTGCAATCACAGCAACCAACCCCATTTGGCTTAT...AAGAAGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000502594.5
ENST00000512023.5
ENST00000512506.5
ENST00000648615.1
CDS-3UTR CAA 90 bp TCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTTGTGGGGTACTGAGATCTTGTGGCACAAGTTTTaGAGGTGGCAGCAGCTAGCA +
Preference number: 5 (lower is better)
Translates to: SLAAGFHIILNHLWGTEILWHKF*RWQQLA
Trigger: TGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAA...GATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACCCTCTTCACGTAGTCTaGTTCTTACAACTTCATGTG +
Preference number: 5 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYPLHVV*FLQLHV
Trigger: CACATGAAGTTGTAAGAACAAGACTACGTGAAGAGG...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CAA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTCCTCTTCACGTAGTCTaGTTCTTACAACTTCATGTG +
Preference number: 5 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSPLHVV*FLQLHV
Trigger: CACATGAAGTTGTAAGAACAAGACTACGTGAAGAGG...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CAA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTACAGCAAGGGGGCCCTaGTCTATAATATTTATACTG +
Preference number: 5 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSTARGP*SIIFIL
Trigger: CAGTATAAATATTATAGACAAGGGCCCCCTTGCTGT...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp ATGATATTCTATCCTGACTTCAAAGTTACAAATTCACTGTGGTGGACCCATCTACCTGAGATCATGTCATaGCACTCCAGCATGGGTGAC +
Preference number: 5 (lower is better)
Translates to: MIFYPDFKVTNSLWWTHLPEIMS*HSSMGD
Trigger: GTCACCCATGCTGGAGTGCAATGACATGATCTCAGG...TAGATGGGTCCACCACAGTGAATTTGTAACTTTGAAGTCAGGATAGAATATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CAA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTCCTCTTCACGTAGTCTaGTTCTTACAACATGTGGAT +
Preference number: 5 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSPLHVV*FLQHVD
Trigger: ATCCACATGTTGTAAGAACAAGACTACGTGAAGAGG...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446041.6
CDS-3UTR CAA 90 bp TCTGTCTCACTAGATGAGTTGTCAGACCACGATAAAGAGACCCATAACCTTCTTGGAAGTGACCTGCCATaGCAGCTGAAATCATATGTA +
Preference number: 5 (lower is better)
Translates to: SVSLDELSDHDKETHNLLGSDLP*QLKSYV
Trigger: TACATATGATTTCAGCTGCAATGGCAGGTCACTTCC...AAGAAGGTTATGGGTCTCTTTATCGTGGTCTGACAACTCATCTAGTGAGACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502594.5
CDS-3UTR CAA 90 bp CATGGTAGAGAAAATGGCAATTTTGAGAGAGGAGTGCTTCTAAAGGCATTTCCTATAAGCCAAATGGGGTaGGTTGCTGTGATTGCAGTA +
Preference number: 5 (lower is better)
Translates to: HGRENGNFERGVLLKAFPISQMG*VAVIAV
Trigger: TACTGCAATCACAGCAACCAACCCCATTTGGCTTAT...AGGAAATGCCTTTAGAAGCACTCCTCTCTCAAAATTGCCATTTTCTCTACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp AAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATGCTTCTTCCTCTTCACGTAGTCTaGTTCTTACAACTTCATGTG +
Preference number: 5 (lower is better)
Translates to: KFLRWQQLASFPQNLMLLPLHVV*FLQLHV
Trigger: CACATGAAGTTGTAAGAACAAGACTACGTGAAGAGG...AAGAAGCATCAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR CAA 90 bp TTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAGCATCATTCCCACAAAATCTGATTAAATTTAAAATATaGTGCCAGGTCCTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LWHKFLRWQQLASFPQNLIKFKI*CQVLSG
Trigger: CCCTGAGAGGACCTGGCACAATATTTTAAATTTAAT...CAGATTTTGTGGGAATGATGCTAGCTGCTGCCACCTCAAAAACTTGTGCCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CAA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCACGCTATTTCATTGGTaGTCAAAAACAGTGACTACT +
Preference number: 5 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTTLFHW*SKTVTT
Trigger: AGTAGTCACTGTTTTTGACAACCAATGAAATAGCGT...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp GACACGCTGCAATATTCTATAATGTTGGGGGTACGACAGGGTACACAGAATACCTTAGACGCTATTTCATaGGTTGTCAAAAACAGTGAC +
Preference number: 5 (lower is better)
Translates to: DTLQYSIMLGVRQGTQNTLDAIS*VVKNSD
Trigger: GTCACTGTTTTTGACAACCAATGAAATAGCGTCTAA...GGTATTCTGTGTACCCTGTCGTACCCCCAACATTATAGAATATTGCAGCGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp TCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGAAAAAACCTTCTCTACAGATTaGTTACAAACCGGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: SCTTKSEKTRGHAAVSEKTFSTD*LQTGFW
Trigger: CCAAAAACCGGTTTGTAACAAATCTGTAGAGAAGGT...TTTTTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp TACCTGCTAAAGCAGACAGCAAGGGGGCCCTTGTCTATAATATTTATACTGTCCAGGCATGGACAATTATaGAAGGGCAAGAAATGGATT +
Preference number: 5 (lower is better)
Translates to: YLLKQTARGPLSIIFILSRHGQL*KGKKWI
Trigger: AATCCATTTCTTGCCCTTCAATAATTGTCCATGCCT...GGACAGTATAAATATTATAGACAAGGGCCCCCTTGCTGTCTGCTTTAGCAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACTCAAAGTTCGTGGCTTaGTCTAACATGCATAGCAGC +
Preference number: 5 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDSKFVA*SNMHSS
Trigger: GCTGCTATGCATGTTAGACAAAGCCACGAACTTTGA...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR CAA 90 bp ACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGGCAGCAGCTAAAAAGATCTGTATTTaGTTCCCTCTTCACGTAGTC +
Preference number: 5 (lower is better)
Translates to: TSCGYAIVVAQVFEVAAAKKICI*FPLHVV
Trigger: GACTACGTGAAGAGGGAACAAAATACAGATCTTTTT...AGCTGCTGCCACCTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000502594.5
ENST00000648615.1
CDS-3UTR CAA 90 bp TCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTTGTGGGGTACTGAGATCGTCTCACTAGATGAGTaGTCAGACCACGATAAAGAG +
Preference number: 5 (lower is better)
Translates to: SLAAGFHIILNHLWGTEIVSLDE*SDHDKE
Trigger: CTCTTTATCGTGGTCTGACAACTCATCTAGTGAGAC...GATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp TACCTGCTAAAGCAGACAGCAAGGGGGCCCTTGTCTATAATATTTATACTGTCCACGCTATTTCATTGGTaGTCAAAAACAGTGACTACT +
Preference number: 5 (lower is better)
Translates to: YLLKQTARGPLSIIFILSTLFHW*SKTVTT
Trigger: AGTAGTCACTGTTTTTGACAACCAATGAAATAGCGT...GGACAGTATAAATATTATAGACAAGGGCCCCCTTGCTGTCTGCTTTAGCAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACTTAGACGCTATTTCATaGGTTGTCAAAAACAGTGAC +
Preference number: 5 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYLDAIS*VVKNSD
Trigger: GTCACTGTTTTTGACAACCAATGAAATAGCGTCTAA...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp TCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGAAAAAATCATTCTTAATCATTaGTGGGGTACTGAGATCAGT +
Preference number: 5 (lower is better)
Translates to: SCTTKSEKTRGHAAVSEKIILNH*WGTEIS
Trigger: ACTGATCTCAGTACCCCACAAATGATTAAGAATGAT...TTTTTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp TACCTGCTAAAGCAGACAGCAAGGGGGCCCTTGTCTATAATATTTATACTGTCCATCATTCTTAATCATTaGTGGGGTACTGAGATCAGT +
Preference number: 5 (lower is better)
Translates to: YLLKQTARGPLSIIFILSIILNH*WGTEIS
Trigger: ACTGATCTCAGTACCCCACAAATGATTAAGAATGAT...GGACAGTATAAATATTATAGACAAGGGCCCCCTTGCTGTCTGCTTTAGCAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp GCAGTAGAAATGGCACCTGAAAAGGCAAACACGATAGATTCAGACCTTCTCTACGTCATACATAAACTATaGCAGATTGTGCTTAGGGAA +
Preference number: 5 (lower is better)
Translates to: AVEMAPEKANTIDSDLLYVIHKL*QIVLRE
Trigger: TTCCCTAAGCACAATCTGCAATAGTTTATGTATGAC...GTAGAGAAGGTCTGAATCTATCGTGTTTGCCTTTTCAGGTGCCATTTCTACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp ATTCATTCATGTACCACAAAATCAGAGAAGACACGAGGACATGCCGCAGTCAGTGTCATACATAAACTATaGCAGATTGTGCTTAGGGAA +
Preference number: 5 (lower is better)
Translates to: IHSCTTKSEKTRGHAAVSVIHKL*QIVLRE
Trigger: TTCCCTAAGCACAATCTGCAATAGTTTATGTATGAC...ACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATGAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp TACCTGCTAAAGCAGACAGCAAGGGGGCCCTTGTCTATAATATTTATACTGTCCATATGCAAGATTTCTTaGTACACTATGAGGGAGTTG +
Preference number: 5 (lower is better)
Translates to: YLLKQTARGPLSIIFILSICKIS*YTMREL
Trigger: CAACTCCCTCATAGTGTACAAAGAAATCTTGCATAT...GGACAGTATAAATATTATAGACAAGGGCCCCCTTGCTGTCTGCTTTAGCAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CAA 90 bp TTTCGTCCTGGTTTCCTCAAGACTGGACAATGTTTGATGTTAACTACAATACAGACACACACACACAACTaGGAACACCTGTGCTCAATT +
Preference number: 5 (lower is better)
Translates to: FRPGFLKTGQCLMLTTIQTHTHN*EHLCSI
Trigger: AATTGAGCACAGGTGTTCCAAGTTGTGTGTGTGTGT...CTGTATTGTAGTTAACATCAAACATTGTCCAGTCTTGAGGAAACCAGGACGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CAA 90 bp ATGATATTCTATCCTGACTTCAAAGTTACAAATTCACTGTGGTGGACCCATCTAATAAGCCAAATGGGGTaGGTTGCTGTGATTGCAGTA +
Preference number: 5 (lower is better)
Translates to: MIFYPDFKVTNSLWWTHLISQMG*VAVIAV
Trigger: TACTGCAATCACAGCAACCAACCCCATTTGGCTTAT...TAGATGGGTCCACCACAGTGAATTTGTAACTTTGAAGTCAGGATAGAATATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp CACACTAGAACCTTAAGAAATCATGAACTCACAAATTACTTCCCTATCACGGCTACAGCAAGGGGGCCCTaGTCTATAATATTTATACTG +
Preference number: 5 (lower is better)
Translates to: HTRTLRNHELTNYFPITATARGP*SIIFIL
Trigger: CAGTATAAATATTATAGACAAGGGCCCCCTTGCTGT...AGCCGTGATAGGGAAGTAATTTGTGAGTTCATGATTTCTTAAGGTTCTAGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CAA 90 bp TCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTTGTGGGGTACTGAGATCACAGCAAGGGGGCCCTaGTCTATAATATTTATACTG +
Preference number: 5 (lower is better)
Translates to: SLAAGFHIILNHLWGTEITARGP*SIIFIL
Trigger: CAGTATAAATATTATAGACAAGGGCCCCCTTGCTGT...GATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp CTTTTAGTCCATCTGTCTGATACACTTTACGAACACATTCAAAAGCACCCATTCCAATATTCTATAATGTaGGGGGTACGACAGGGTACA +
Preference number: 5 (lower is better)
Translates to: LLVHLSDTLYEHIQKHPFQYSIM*GVRQGT
Trigger: TGTACCCTGTCGTACCCCCAACATTATAGAATATTG...GAATGGGTGCTTTTGAATGTGTTCGTAAAGTGTATCAGACAGATGGACTAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CAA 90 bp GAATCTGTCTCACTAGATGAGTTGTCAGACCACGATAAAGAGACCCATAACCTTATCATTCTTAATCATTaGTGGGGTACTGAGATCAGT +
Preference number: 5 (lower is better)
Translates to: ESVSLDELSDHDKETHNLIILNH*WGTEIS
Trigger: ACTGATCTCAGTACCCCACAAATGATTAAGAATGAT...AAGGTTATGGGTCTCTTTATCGTGGTCTGACAACTCATCTAGTGAGACAGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CAA 90 bp ATGATATTCTATCCTGACTTCAAAGTTACAAATTCACTGTGGTGGACCCATCTATACACTATGAGGGAGTaGGATTACTTGACCTTTGGG +
Preference number: 5 (lower is better)
Translates to: MIFYPDFKVTNSLWWTHLYTMRE*DYLTFG
Trigger: CCCAAAGGTCAAGTAATCCAACTCCCTCATAGTGTA...TAGATGGGTCCACCACAGTGAATTTGTAACTTTGAAGTCAGGATAGAATATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CAA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACGATTCCAGAACCAGATaGGTCAAACCAACTGTTTAT +
Preference number: 5 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDDSRTR*VKPTVY
Trigger: ATAAACAGTTGGTTTGACCAATCTGGTTCTGGAATC...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR CAA 90 bp TTAGTCCATCTGTCTGATACACTTTACGAACACATTCAAAAGCACCCATTCGCCCTATGGCCAGTAATATaGCACATCCATACTTATGAA +
Preference number: 5 (lower is better)
Translates to: LVHLSDTLYEHIQKHPFALWPVI*HIHTYE
Trigger: TTCATAAGTATGGATGTGCAATATTACTGGCCATAG...GGCGAATGGGTGCTTTTGAATGTGTTCGTAAAGTGTATCAGACAGATGGACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512023.5
CDS-3UTR CAA 90 bp CAAAGTTACAAATTCACTGTGGTGGACCCATCTAGAAAGGATGGTTCTACAAAGAAAAAGATCTGTATTTaGTTCCCTCTTCACGTAGTC +
Preference number: 5 (lower is better)
Translates to: QSYKFTVVDPSRKDGSTKKKICI*FPLHVV
Trigger: GACTACGTGAAGAGGGAACAAAATACAGATCTTTTT...CTTTGTAGAACCATCCTTTCTAGATGGGTCCACCACAGTGAATTTGTAACTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp CCCAGTAATAGAGCAAACATTATTTTTACCAACCCAAACTCTGCTGGTCCTAACAAAAAGATCTGTATTTaGTTCCCTCTTCACGTAGTC +
Preference number: 5 (lower is better)
Translates to: PSNRANIIFTNPNSAGPNKKICI*FPLHVV
Trigger: GACTACGTGAAGAGGGAACAAAATACAGATCTTTTT...GTTAGGACCAGCAGAGTTTGGGTTGGTAAAAATAATGTTTGCTCTATTACTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp AGTCATTATATATTTGAGGAGAAAAGGCTGAACTGTACTTATCAGCTCCAAAGGCAATATTCTATAATGTaGGGGGTACGACAGGGTACA +
Preference number: 5 (lower is better)
Translates to: SHYIFEEKRLNCTYQLQRQYSIM*GVRQGT
Trigger: TGTACCCTGTCGTACCCCCAACATTATAGAATATTG...CCTTTGGAGCTGATAAGTACAGTTCAGCCTTTTCTCCTCAAATATATAATGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp ATGATATTCTATCCTGACTTCAAAGTTACAAATTCACTGTGGTGGACCCATCTACAATATTCTATAATGTaGGGGGTACGACAGGGTACA +
Preference number: 5 (lower is better)
Translates to: MIFYPDFKVTNSLWWTHLQYSIM*GVRQGT
Trigger: TGTACCCTGTCGTACCCCCAACATTATAGAATATTG...TAGATGGGTCCACCACAGTGAATTTGTAACTTTGAAGTCAGGATAGAATATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp TCCTTAGCTGCTGGTTTTCATATCATTCTTAATCATTTGTGGGGTACTGAGATCACCTTCTCTACAGATTaGTTACAAACCGGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: SLAAGFHIILNHLWGTEITFSTD*LQTGFW
Trigger: CCAAAAACCGGTTTGTAACAAATCTGTAGAGAAGGT...GATCTCAGTACCCCACAAATGATTAAGAATGATATGAAAACCAGCAGCTAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp GTTCTTACAACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTGAGGTGAGGCATGGACAATTATaGAAGGGCAAGAAATGGATT +
Preference number: 5 (lower is better)
Translates to: VLTTSCGYAIVVAQVFEVRHGQL*KGKKWI
Trigger: AATCCATTTCTTGCCCTTCAATAATTGTCCATGCCT...CACCTCAAAAACTTGTGCCACAACTATAGCATATCCACATGAAGTTGTAAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CAA 90 bp ATTTTGCCAGTGCCTTCAGTGCAGAGTACTATTAGTAGAACCAACAATTTCAGAATTTTAACCATTATTTaGCCAGTGCCTTCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: ILPVPSVQSTISRTNNFRILTII*PVPSVQ
Trigger: CTGCACTGAAGGCACTGGCAAAATAATGGTTAAAAT...TCTGAAATTGTTGGTTCTACTAATAGTACTCTGCACTGAAGGCACTGGCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324194.12
ENST00000648615.1
CDS-3UTR CAA 90 bp TTCCAGAACCAGATTGGTCAAACCAACTGTTTATCTTTATGGCAGGGTAAAGACTTGTATTTCACTCTTTaGACCTTTGGATTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: FQNQIGQTNCLSLWQGKDLYFTL*TFGLSL
Trigger: AAGGGACAATCCAAAGGTCAAAAGAGTGAAATACAA...GTCTTTACCCTGCCATAAAGATAAACAGTTGGTTTGACCAATCTGGTTCTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR CAA 90 bp GCAGTAAAACCCAAGCTTCTGTCCATAATACTCTTCCAAGTCACAAAAGAATTTACCTTCTCTACAGATTaGTTACAAACCGGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: AVKPKLLSIILFQVTKEFTFSTD*LQTGFW
Trigger: CCAAAAACCGGTTTGTAACAAATCTGTAGAGAAGGT...AAATTCTTTTGTGACTTGGAAGAGTATTATGGACAGAAGCTTGGGTTTTACTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648615.1
CDS-3UTR CAA 90 bp AGTCATTATATATTTGAGGAGAAAAGGCTGAACTGTACTTATCAGCTCCAAAGGAGGCATGGACAATTATaGAAGGGCAAGAAATGGATT +
Preference number: 5 (lower is better)
Translates to: SHYIFEEKRLNCTYQLQRRHGQL*KGKKWI
Trigger: AATCCATTTCTTGCCCTTCAATAATTGTCCATGCCT...CCTTTGGAGCTGATAAGTACAGTTCAGCCTTTTCTCCTCAAATATATAATGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp AGTCATTATATATTTGAGGAGAAAAGGCTGAACTGTACTTATCAGCTCCAAAGGATTAAATTTAAAATATaGTGCCAGGTCCTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: SHYIFEEKRLNCTYQLQRIKFKI*CQVLSG
Trigger: CCCTGAGAGGACCTGGCACAATATTTTAAATTTAAT...CCTTTGGAGCTGATAAGTACAGTTCAGCCTTTTCTCCTCAAATATATAATGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp ATGATATTCTATCCTGACTTCAAAGTTACAAATTCACTGTGGTGGACCCATCTAATTAAATTTAAAATATaGTGCCAGGTCCTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: MIFYPDFKVTNSLWWTHLIKFKI*CQVLSG
Trigger: CCCTGAGAGGACCTGGCACAATATTTTAAATTTAAT...TAGATGGGTCCACCACAGTGAATTTGTAACTTTGAAGTCAGGATAGAATATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324194.12
ENST00000446041.6
ENST00000648615.1
CDS-3UTR CAA 90 bp TTTTCAATGGAAAATCAAAGTTCGTGGCTTTGTCTAACATGCATAGCAGCAAATCATTCATACCTGCCATaGCAGCTGAAATCATATGTA +
Preference number: 5 (lower is better)
Translates to: FSMENQSSWLCLTCIAANHSYLP*QLKSYV
Trigger: TACATATGATTTCAGCTGCAATGGCAGGTATGAATG...ATTTGCTGCTATGCATGTTAGACAAAGCCACGAACTTTGATTTTCCATTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR CAA 90 bp TTTTCAATGGAAAATCAAAGTTCGTGGCTTTGTCTAACATGCATAGCAGCAAATCTTGAGGAATTCAAGTaGGGAAATGGCATCAATGTA +
Preference number: 5 (lower is better)
Translates to: FSMENQSSWLCLTCIAANLEEFK*GNGINV
Trigger: TACATTGATGCCATTTCCCAACTTGAATTCCTCAAG...ATTTGCTGCTATGCATGTTAGACAAAGCCACGAACTTTGATTTTCCATTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS-3UTR CAA 90 bp AGTCTTGTTCTTACAACTTCATGTGGATATGCTATAGTTGTGGCACAAGTTTTTTCTTGTGTTCTGCCATaGCAGCTGAAATCATATGTA +
Preference number: 5 (lower is better)
Translates to: SLVLTTSCGYAIVVAQVFSCVLP*QLKSYV
Trigger: TACATATGATTTCAGCTGCAATGGCAGAACACAAGA...AAAAACTTGTGCCACAACTATAGCATATCCACATGAAGTTGTAAGAACAAGACT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000512023.5
CDS-3UTR CAA 90 bp TTTTCAATGGAAAATCAAAGTTCGTGGCTTTGTCTAACATGCATAGCAGCAAATTGGTGTGTTAAAATCTaGCAGGCAGTATCATTAATG +
Preference number: 5 (lower is better)
Translates to: FSMENQSSWLCLTCIAANWCVKI*QAVSLM
Trigger: CATTAATGATACTGCCTGCAAGATTTTAACACACCA...ATTTGCTGCTATGCATGTTAGACAAAGCCACGAACTTTGATTTTCCATTGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507429.5
CDS GCA 72 bp CCCGGGGACGGCGAGGAGAGCTGGCCGAGATGCGGCTaGAGAAAGCAACCGGCACAGCCCTCCCCGCGGCAC +
Preference number: 6 (lower is better)
Translates to: PGDGEESWPRCG*RKQPAQPSPRH
Trigger: GTGCCGCGGGGAGGGCTGTGCCGGTTGCTTTCTGCAGCCGCATCTCGGCCAGCTCTCCTCGCCGTCCCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324194.12
ENST00000393015.8
ENST00000446041.6
ENST00000502756.1
ENST00000515813.1
ENST00000648615.1
CDS TCA 72 bp CTGGCTCATTCTCTCTCCCGCATGTCCTCCGGCCGCTaGGGCGGGACGCGGATCTGGCCGCCCGCTACGGCA +
Preference number: 6 (lower is better)
Translates to: LAHSLSRMSSGR*GGTRIWPPATA
Trigger: TGCCGTAGCGGGCGGCCAGATCCGCGTCCCGCCTCAGCGGCCGGAGGACATGCGGGAGAGAGAATGAGCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324194.12
ENST00000393015.8
ENST00000446041.6
ENST00000453248.6
ENST00000502594.5
ENST00000502756.1
ENST00000507429.5
ENST00000515813.1
ENST00000648615.1
CDS CCA 72 bp GGAGACGCACAGCGCCCCGGGGACGGCGAGGAGAGCTaGCCGAGATGCGGCTGCAGAAAGCAACCGGCACAG +
Preference number: 6 (lower is better)
Translates to: GDAQRPGDGEES*PRCGCRKQPAQ
Trigger: CTGTGCCGGTTGCTTTCTGCAGCCGCATCTCGGCCAGCTCTCCTCGCCGTCCCCGGGGCGCTGTGCGTCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000324194.12
ENST00000393015.8
ENST00000446041.6
ENST00000502594.5
ENST00000502756.1
ENST00000507429.5
ENST00000515813.1
ENST00000648615.1
CDS CAA 72 bp CCTCAAAGCGGCCCTGGATCCCCGACGCCTGCTAGATaGCGGCGTGCGGCCAGGTCCAGCGGCGTCCGGGTA +
Preference number: 6 (lower is better)
Translates to: PQSGPGSPTPAR*RRAARSSGVRV
Trigger: TACCCGGACGCCGCTGGACCTGGCCGCACGCCGCAATCTAGCAGGCGTCGGGGATCCAGGGCCGCTTTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513887.5
CDS TCA 72 bp GAAATGAGCGGCCCGAGGTCCGAGGTGGGGCGTGAGTaGCGTGCAGAGGCCCAAGCGAGCGCTGCAAGGAGC +
Preference number: 6 (lower is better)
Translates to: EMSGPRSEVGRE*RAEAQASAARS
Trigger: GCTCCTTGCAGCGCTCGCTTGGGCCTCTGCACGTCACTCACGCCCCACCTCGGACCTCGGGCCGCTCATTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513887.5
CDS CAA 90 bp GAGCGCTGCAAGGAGCGAGGGCTAAAGGAGTCTCCGGCGCCCATTTaGTCCTCAGCCTCCGCACTTTCCGCCCCGTCCCCTTGGGCCATG +
Preference number: 6 (lower is better)
Translates to: ERCKERGLKESPAPI*SSASALSAPSPWAM
Trigger: CATGGCCCAAGGGGACGGGGCGGAAAGTGCGGAGGCTGAGGACAAAATGGGCGCCGGAGACTCCTTTAGCCCTCGCTCCTTGCAGCGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513887.5
CDS TCA 72 bp CTGTACCACCACATCTTGCAAAGCCGAGCCCGGAAATaGGCGGCCCGAGGTCCGAGGTGGGGCGTGAGTGAC +
Preference number: 6 (lower is better)
Translates to: LYHHILQSRARK*AARGPRWGVSD
Trigger: GTCACTCACGCCCCACCTCGGACCTCGGGCCGCTCATTTCCGGGCTCGGCTTTGCAAGATGTGGTGGTACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513887.5
CDS GCA 72 bp CAGCCTCCGCACTTTCCGCCCCGTCCCCTTGGGCCATaGAACCTACGCGAAATCCGAAGCCAGGCTCCTCAA +
Preference number: 6 (lower is better)
Translates to: QPPHFPPRPLGP*NLREIRSQAPQ
Trigger: TTGAGGAGCCTGGCTTCGGATTTCGCGTAGGTTGCATGGCCCAAGGGGACGGGGCGGAAAGTGCGGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513887.5
CDS CCA 72 bp TTGTCCTCAGCCTCCGCACTTTCCGCCCCGTCCCCTTaGGCCATGCAACCTACGCGAAATCCGAAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: LSSASALSAPSP*AMQPTRNPKPG
Trigger: GCCTGGCTTCGGATTTCGCGTAGGTTGCATGGCCCAAGGGGACGGGGCGGAAAGTGCGGAGGCTGAGGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513887.5
CDS CAA 72 bp AAGGAGCGAGGGCTAAAGGAGTCTCCGGCGCCCATTTaGTCCTCAGCCTCCGCACTTTCCGCCCCGTCCCCT +
Preference number: 6 (lower is better)
Translates to: KERGLKESPAPI*SSASALSAPSP
Trigger: AGGGGACGGGGCGGAAAGTGCGGAGGCTGAGGACAAAATGGGCGCCGGAGACTCCTTTAGCCCTCGCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513887.5
CDS CAA 72 bp TTTGTCCTCAGCCTCCGCACTTTCCGCCCCGTCCCCTaGGGCCATGCAACCTACGCGAAATCCGAAGCCAGG +
Preference number: 6 (lower is better)
Translates to: FVLSLRTFRPVP*GHATYAKSEAR
Trigger: CCTGGCTTCGGATTTCGCGTAGGTTGCATGGCCCAAGGGGACGGGGCGGAAAGTGCGGAGGCTGAGGACAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513887.5
CDS GCA 72 bp GCTCCCACTGTACCACCACATCCTCCGGCAAACAGATaGACCAGCGTGTCCCTCTGGCTCATTCTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: APTVPPHPPANR*TSVSLWLILSP
Trigger: GGGAGAGAGAATGAGCCAGAGGGACACGCTGGTGCATCTGTTTGCCGGAGGATGTGGTGGTACAGTGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324194.12
ENST00000393015.8
ENST00000446041.6
ENST00000453248.6
ENST00000502594.5
ENST00000502756.1
ENST00000507429.5
ENST00000515813.1
ENST00000631654.1
ENST00000648615.1
CDS TCA 72 bp TTAGGCAATGAAGAGGTCCGGGAGACACTACTCGGTTaGCACTGGCTCCAGCCATGGTGTTCAGCTGAACTT +
Preference number: 6 (lower is better)
Translates to: LGNEEVRETLLG*HWLQPWCSAEL
Trigger: AAGTTCAGCTGAACACCATGGCTGGAGCCAGTGTCAACCGAGTAGTGTCTCCCGGACCTCTTCATTGCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000324194.12
ENST00000393015.8
ENST00000446041.6
ENST00000453248.6
ENST00000502594.5
ENST00000502756.1
ENST00000507429.5
ENST00000512023.5
ENST00000513887.5
ENST00000515813.1
ENST00000631654.1
ENST00000648615.1
CDS TCA 72 bp TCTACAGGAAGTGACCTGCGGATGGGGAGCATGAGATaGCACGATCTCACTCTTTTCTCGGGAGAAATGTAC +
Preference number: 6 (lower is better)
Translates to: STGSDLRMGSMR*HDLTLFSGEMY
Trigger: GTACATTTCTCCCGAGAAAAGAGTGAGATCGTGTCATCTCATGCTCCCCATCCGCAGGTCACTTCCTGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502866.1
ENST00000512506.5
ENST00000648615.1
CDS TCA 72 bp ATATTTCTACAGGAAGTGACCTGCGGATGGGGAGCATaGGATGACACGATCTCACTCTTTTCTCGGGAGAAA +
Preference number: 6 (lower is better)
Translates to: IFLQEVTCGWGA*DDTISLFSREK
Trigger: TTTCTCCCGAGAAAAGAGTGAGATCGTGTCATCTCATGCTCCCCATCCGCAGGTCACTTCCTGTAGAAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502866.1
ENST00000512506.5
ENST00000648615.1
CDS GCA 72 bp ATTGCTTTCCCAACCTACTTAGAATATCCTTTAGGGTaGTCTCTACTGTCTAAGCTGAATTCAGAAATCCAT +
Preference number: 6 (lower is better)
Translates to: IAFPTYLEYPLG*SLLSKLNSEIH
Trigger: ATGGATTTCTGAATTCAGCTTAGACAGTAGAGAGCACCCTAAAGGATATTCTAAGTAGGTTGGGAAAGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511757.1
CDS CAA 90 bp TCTAAGCTGAATTCAGAAATCCATCTCTACAAACACATAGACATTTaGTGTATTCTACGGCTAAAAAGCATGCACTTGGGATCCTTAAAA +
Preference number: 6 (lower is better)
Translates to: SKLNSEIHLYKHIDI*CILRLKSMHLGSLK
Trigger: TTTTAAGGATCCCAAGTGCATGCTTTTTAGCCGTAGAATACACAAAATGTCTATGTGTTTGTAGAGATGGATTTCTGAATTCAGCTTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511757.1