RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC25A32 (Homo sapiens)

Ensembl gene IDs: ENSG00000164933

Ensembl transcript IDs: ENST00000297578.9, ENST00000521645.5, ENST00000523256.6, ENST00000523701.1, ENST00000523866.1

Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAAATCTGTGAAACTCTATCCTTCGTGTCAGTTTTAACATTGTGTTaGTGGCAGCCATTTCAGGCAGAGGTAGCCAAGTTCCATATATAT +
Preference number: 1 (lower is better)
Translates to: EICETLSFVSVLTLC*WQPFQAEVAKFHIY
Trigger: ATATATATGGAACTTGGCTACCTCTGCCTGAAATGGCTGCCATCAACACAATGTTAAAACTGACACGAAGGATAGAGTTTCACAGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR TCA 90 bp GCAAATGTTGCAAATCAGCTTCCACCAATAAAACGTAGAAATCTGTaGAACTCTATCCTTCGTGTCAGTTTTAACATTGTGTTGATGGCA +
Preference number: 1 (lower is better)
Translates to: ANVANQLPPIKRRNL*NSILRVSFNIVLMA
Trigger: TGCCATCAACACAATGTTAAAACTGACACGAAGGATAGAGTTTCACAGATTTCTACGTTTTATTGGTGGAAGCTGATTTGCAACATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR TCA 90 bp AGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCTTACTTCGAGCTCTTACGACTTaGTATGGGTATGTTGCTGCG +
Preference number: 2 (lower is better)
Translates to: SLLLPWADILELSSLSLLRALTT*YGYVAA
Trigger: CGCAGCAACATACCCATATCAAGTCGTAAGAGCTCG...AAGTAAGCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CCA 90 bp GCAGCCATTTCAGGCAGAGGTAGCCAAGTTCCATATATATGGGGAAGGCAAAAAAGCTTGTTGCTGCCTTaGGCAGATATACTGGAATTG +
Preference number: 2 (lower is better)
Translates to: AAISGRGSQVPYIWGRQKSLLLP*ADILEL
Trigger: CAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCT...TTTTTGCCTTCCCCATATATATGGAACTTGGCTACCTCTGCCTGAAATGGCTGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR GCA 90 bp GCAGGCTGGAGTCACTCTAATCAAATTAGGAGCAATTCCCTTGTAAAATCCACCAAAAGAGCTTGTTGCTaGCTTGGGCAGATATACTGG +
Preference number: 2 (lower is better)
Translates to: AGWSHSNQIRSNSLVKSTKRACC*LGQIYW
Trigger: CCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTT...GGTGGATTTTACAAGGGAATTGCTCCTAATTTGATTAGAGTGACTCCAGCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR GCA 90 bp ACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGAAAAGAGCTTGTTGCTaGCTTGGGCAGATATACTGG +
Preference number: 2 (lower is better)
Translates to: TKELVAALGRYTGIVLFEKRACC*LGQIYW
Trigger: CCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTT...CTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR TCA 90 bp CAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCAAACGTAGAAATCTGTaGAACTCTATCCTTCGTGTC +
Preference number: 2 (lower is better)
Translates to: QKSLLLPWADILELSSLSKRRNL*NSILRV
Trigger: GACACGAAGGATAGAGTTTCACAGATTTCTACGTTT...GCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CCA 90 bp ACGAGCTCTTACGACTTGATATGGGTATGTTGCTGCGACAGCAAATATTTTGGATCTTACGACTTGATATaGGTATGTTGCTGCGACAGC +
Preference number: 2 (lower is better)
Translates to: TSSYDLIWVCCCDSKYFGSYDLI*VCCCDS
Trigger: GCTGTCGCAGCAACATACCCATATCAAGTCGTAAGA...TCCAAAATATTTGCTGTCGCAGCAACATACCCATATCAAGTCGTAAGAGCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR TCA 90 bp CAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCCTTCTGGTAATCTATTaGTATGCTGGTTGTACTTCA +
Preference number: 2 (lower is better)
Translates to: QKSLLLPWADILELSSLSLLVIY*YAGCTS
Trigger: TGAAGTACAACCAGCATATCAATAGATTACCAGAAG...GCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR GCA 90 bp ACGAGCTCTTACGACTTGATATGGGTATGTTGCTGCGACAGCAAATATTTTGGACTTCAGCAATTCATATaGCATAAACTGAAGGGCACC +
Preference number: 2 (lower is better)
Translates to: TSSYDLIWVCCCDSKYFGLQQFI*HKLKGT
Trigger: GGTGCCCTTCAGTTTATGGCATATGAATTGCTGAAG...TCCAAAATATTTGCTGTCGCAGCAACATACCCATATCAAGTCGTAAGAGCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523866.1
3UTR-3UTR CCA 90 bp TTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATAGCTTGTTGCTGCCTTaGGCAGATATACTGGAATTG +
Preference number: 2 (lower is better)
Translates to: LCLKHKRACCCLGQIYWNSLLLP*ADILEL
Trigger: CAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCT...ATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CCA 90 bp TACCACAAAGGTAATACAGCAGGCTGGAGTCACTCTAATCAAATTAGGAGCAATAGCTTGTTGCTGCCTTaGGCAGATATACTGGAATTG +
Preference number: 2 (lower is better)
Translates to: YHKGNTAGWSHSNQIRSNSLLLP*ADILEL
Trigger: CAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCT...ATTGCTCCTAATTTGATTAGAGTGACTCCAGCCTGCTGTATTACCTTTGTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CCA 90 bp GTATTCTGGCATCCTTTGGGTACAGGCCCTTTTATATTTATAGATGTCTACAATTTCCCAATTCTAAAATaGTCTGGCCAGGCGCAGTGG +
Preference number: 2 (lower is better)
Translates to: VFWHPLGTGPFIFIDVYNFPILK*SGQAQW
Trigger: CCACTGCGCCTGGCCAGACCATTTTAGAATTGGGAA...ATTGTAGACATCTATAAATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
3UTR-3UTR CCA 90 bp AAATCCACCGACGCCTTCTTTCCTCCATGTCTTTGTGATTACATCTATTACACCTCTACTGTGCTCAACTaGGCTTCTGGTAATCTATTG +
Preference number: 2 (lower is better)
Translates to: KSTDAFFPPCLCDYIYYTSTVLN*ASGNLL
Trigger: CAATAGATTACCAGAAGCCCAGTTGAGCACAGTAGA...GGTGTAATAGATGTAATCACAAAGACATGGAGGAAAGAAGGCGTCGGTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CCA 90 bp ATTAGGAGCAATTCCCTTGTAAAATCCACCGACGCCTTCTTTCCTCCATGTCTTGGTAATACAGCAGGCTaGAGTCACTCTAATCAAATT +
Preference number: 2 (lower is better)
Translates to: IRSNSLVKSTDAFFPPCLGNTAG*SHSNQI
Trigger: AATTTGATTAGAGTGACTCCAGCCTGCTGTATTACC...AAGACATGGAGGAAAGAAGGCGTCGGTGGATTTTACAAGGGAATTGCTCCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR CAA 90 bp TGTGTTGATCCTGAAGACGAGCTCTTACGACTTGATATGGGTATGTaGCTGCGACAGCAAATATTTTGGATAGTGCTGCAACAGATATAT +
Preference number: 2 (lower is better)
Translates to: CVDPEDELLRLDMGM*LRQQIFWIVLQQIY
Trigger: ATATATCTGTTGCAGCACTATCCAAAATATTTGCTGTCGCAGCAACATACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATCAACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR TCA 90 bp ACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCTTCTGGTAATCTATTaGTATGCTGGTTGTACTTCA +
Preference number: 2 (lower is better)
Translates to: TKELVAALGRYTGIVLFELLVIY*YAGCTS
Trigger: TGAAGTACAACCAGCATATCAATAGATTACCAGAAG...CTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR GCA 90 bp GCAGGCTGGAGTCACTCTAATCAAATTAGGAGCAATTCCCTTGTAAAATCCACCATATATATTCTACTGTaGTCAACTGGGCTTCTGGTA +
Preference number: 2 (lower is better)
Translates to: AGWSHSNQIRSNSLVKSTIYILL*STGLLV
Trigger: TACCAGAAGCCCAGTTGAGCACAGTAGAATATATAT...GGTGGATTTTACAAGGGAATTGCTCCTAATTTGATTAGAGTGACTCCAGCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CCA 90 bp AGCAGTTCTCTGGCTTCTAATGACTATAGAGCAATTTCGAATATGAGCCATGTTAGCTTGTTGCTGCCTTaGGCAGATATACTGGAATTG +
Preference number: 2 (lower is better)
Translates to: SSSLASNDYRAISNMSHVSLLLP*ADILEL
Trigger: CAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCT...AACATGGCTCATATTCGAAATTGCTCTATAGTCATTAGAAGCCAGAGAACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CCA 90 bp TATACCACAAAGGTAATACAGCAGGCTGGAGTCACTCTAATCAAATTAGGAGCATCTACTGTGCTCAACTaGGCTTCTGGTAATCTATTG +
Preference number: 2 (lower is better)
Translates to: YTTKVIQQAGVTLIKLGASTVLN*ASGNLL
Trigger: CAATAGATTACCAGAAGCCCAGTTGAGCACAGTAGA...TGCTCCTAATTTGATTAGAGTGACTCCAGCCTGCTGTATTACCTTTGTGGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR CAA 90 bp CCATGTCTTTGTGATTACATCTATTACACCACTGTAAAACATGTGTaGATCCTGAAGACGAGCTCTTACGACTTGATATGGGTATGTTGC +
Preference number: 2 (lower is better)
Translates to: PCLCDYIYYTTVKHV*ILKTSSYDLIWVCC
Trigger: GCAACATACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATCAACACATGTTTTACAGTGGTGTAATAGATGTAATCACAAAGACATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR TCA 90 bp CTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTCTGGTAATCTATTaGTATGCTGGTTGTACTTCA +
Preference number: 2 (lower is better)
Translates to: LKHKRACCCLGQIYWNCPLLVIY*YAGCTS
Trigger: TGAAGTACAACCAGCATATCAATAGATTACCAGAAG...AGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR TCA 90 bp TTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTCCTCCATGTCTTTGTaGTTACATCTATTACACCAC +
Preference number: 2 (lower is better)
Translates to: LCLKHKRACCCLGQIYWNSSMSL*LHLLHH
Trigger: GTGGTGTAATAGATGTAATCACAAAGACATGGAGGA...ATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR GCA 90 bp GTATTCTGGCATCCTTTGGGTACAGGCCCTTTTATATTTATAGATGTCTACAATCACAAAAGAGCTTGTTaGTGCCTTGGGCAGATATAC +
Preference number: 2 (lower is better)
Translates to: VFWHPLGTGPFIFIDVYNHKRAC*CLGQIY
Trigger: GTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTG...ATTGTAGACATCTATAAATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
3UTR-3UTR GCA 90 bp CTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCCATTTAGCAAATGTTaGAAATCAGCTTCCACCAAT +
Preference number: 2 (lower is better)
Translates to: LKHKRACCCLGQIYWNCPPFSKC*KSASTN
Trigger: ATTGGTGGAAGCTGATTTGCAACATTTGCTAAATGG...AGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR GCA 90 bp CTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTATATATATTCTACTGTaGTCAACTGGGCTTCTGGTA +
Preference number: 2 (lower is better)
Translates to: LKHKRACCCLGQIYWNCPIYILL*STGLLV
Trigger: TACCAGAAGCCCAGTTGAGCACAGTAGAATATATAT...AGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR GCA 90 bp CACTGTAAAACATGTGTTGATCCTGAAGACGAGCTCTTACGACTTGATATGGGTATATGGGTATGTTGCTaGGACAGCAAATATTTTGGA +
Preference number: 2 (lower is better)
Translates to: HCKTCVDPEDELLRLDMGIWVCC*DSKYFG
Trigger: TCCAAAATATTTGCTGTCGCAGCAACATACCCATAT...ACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATCAACACATGTTTTACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR GCA 90 bp ATTAGGAGCAATTCCCTTGTAAAATCCACCGACGCCTTCTTTCCTCCATGTCTTTTGATATGGGTATGTTaGTGCGACAGCAAATATTTT +
Preference number: 2 (lower is better)
Translates to: IRSNSLVKSTDAFFPPCLLIWVC*CDSKYF
Trigger: AAAATATTTGCTGTCGCAGCAACATACCCATATCAA...AAGACATGGAGGAAAGAAGGCGTCGGTGGATTTTACAAGGGAATTGCTCCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CCA 90 bp GACGCCTTCTTTCCTCCATGTCTTTGTGATTACATCTATTACACCACTGTAAAATCTACTGTGCTCAACTaGGCTTCTGGTAATCTATTG +
Preference number: 2 (lower is better)
Translates to: DAFFPPCLCDYIYYTTVKSTVLN*ASGNLL
Trigger: CAATAGATTACCAGAAGCCCAGTTGAGCACAGTAGA...TTTTACAGTGGTGTAATAGATGTAATCACAAAGACATGGAGGAAAGAAGGCGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CCA 90 bp GCAAATATTTTGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGTCTTACGACTTGATATaGGTATGTTGCTGCGACAGC +
Preference number: 2 (lower is better)
Translates to: ANILDSAATDIYSTVLNWSYDLI*VCCCDS
Trigger: GCTGTCGCAGCAACATACCCATATCAAGTCGTAAGA...CCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCAAAATATTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CCA 90 bp TTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATGGTAATACAGCAGGCTaGAGTCACTCTAATCAAATT +
Preference number: 2 (lower is better)
Translates to: LCLKHKRACCCLGQIYWNGNTAG*SHSNQI
Trigger: AATTTGATTAGAGTGACTCCAGCCTGCTGTATTACC...ATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR CAA 90 bp GAATTCTTCTTTTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTaGGGCAGATATACTGGAATTGTCCTCTTTGAGCTTACTTTCTCT +
Preference number: 2 (lower is better)
Translates to: EFFFYALNTKELVAA*GRYTGIVLFELTFS
Trigger: AGAGAAAGTAAGCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAAAAGAAGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR GCA 90 bp CTGCAGTTCACTTTTTCCGTGTGGGGACTAATATCAAGATTTCATATGAATTATAAAAGAGCTTGTTGCTaGCTTGGGCAGATATACTGG +
Preference number: 2 (lower is better)
Translates to: LQFTFSVWGLISRFHMNYKRACC*LGQIYW
Trigger: CCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTT...ATAATTCATATGAAATCTTGATATTAGTCCCCACACGGAAAAAGTGAACTGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
3UTR-3UTR GCA 90 bp TGTCTTTGTGATTACATCTATTACACCACTGTAAAACATGTGTTGATCCTGAAGAAAAGAGCTTGTTGCTaGCTTGGGCAGATATACTGG +
Preference number: 2 (lower is better)
Translates to: CLCDYIYYTTVKHVLILKKRACC*LGQIYW
Trigger: CCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTT...CTTCAGGATCAACACATGTTTTACAGTGGTGTAATAGATGTAATCACAAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR GCA 90 bp TTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATCCATTTAGCAAATGTTaGAAATCAGCTTCCACCAAT +
Preference number: 2 (lower is better)
Translates to: LCLKHKRACCCLGQIYWNPFSKC*KSASTN
Trigger: ATTGGTGGAAGCTGATTTGCAACATTTGCTAAATGG...ATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR GCA 90 bp TGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAGGTAATCTATTGATATaGTGGTTGTACTTCAACTTC +
Preference number: 2 (lower is better)
Translates to: WIVLQQIYILLCSTGLLVGNLLI*WLYFNF
Trigger: GAAGTTGAAGTACAACCAGCATATCAATAGATTACC...TACCAGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523866.1
3UTR-3UTR GCA 90 bp TATACCACAAAGGTAATACAGCAGGCTGGAGTCACTCTAATCAAATTAGGAGCAATATATATTCTACTGTaGTCAACTGGGCTTCTGGTA +
Preference number: 2 (lower is better)
Translates to: YTTKVIQQAGVTLIKLGAIYILL*STGLLV
Trigger: TACCAGAAGCCCAGTTGAGCACAGTAGAATATATAT...TGCTCCTAATTTGATTAGAGTGACTCCAGCCTGCTGTATTACCTTTGTGGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CCA 90 bp TTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATAAAATGGTCTGGATTTaGTCAACACCTTATTCAGTA +
Preference number: 2 (lower is better)
Translates to: LCLKHKRACCCLGQIYWNKMVWI*STPYSV
Trigger: TACTGAATAAGGTGTTGACCAAATCCAGACCATTTT...ATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
3UTR CAA 90 bp ACAGATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAATCTATaGATATGCTGGTTGTACTTCAACTTCAGCAATTCATATGCCATA +
Preference number: 2 (lower is better)
Translates to: TDIYSTVLNWASGNL*ICWLYFNFSNSYAI
Trigger: TATGGCATATGAATTGCTGAAGTTGAAGTACAACCAGCATATCAATAGATTACCAGAAGCCCAGTTGAGCACAGTAGAATATATATCTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523866.1
3UTR-3UTR GCA 90 bp GCAAATATTTTGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGATATGGGTATGTTGCTaGGACAGCAAATATTTTGGA +
Preference number: 2 (lower is better)
Translates to: ANILDSAATDIYSTVLNWIWVCC*DSKYFG
Trigger: TCCAAAATATTTGCTGTCGCAGCAACATACCCATAT...CCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCAAAATATTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CCA 90 bp CTGCAGTTCACTTTTTCCGTGTGGGGACTAATATCAAGATTTCATATGAATTATAAAATACTAGTATTCTaGCATCCTTTGGGTACAGGC +
Preference number: 2 (lower is better)
Translates to: LQFTFSVWGLISRFHMNYKILVF*HPLGTG
Trigger: GCCTGTACCCAAAGGATGCCAGAATACTAGTATTTT...ATAATTCATATGAAATCTTGATATTAGTCCCCACACGGAAAAAGTGAACTGCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
3UTR-3UTR CCA 90 bp CTGCAGTTCACTTTTTCCGTGTGGGGACTAATATCAAGATTTCATATGAATTATTTCACTTTTTCCGTGTaGGGACTAATATCAAGATTT +
Preference number: 2 (lower is better)
Translates to: LQFTFSVWGLISRFHMNYFTFSV*GLISRF
Trigger: AAATCTTGATATTAGTCCCCACACGGAAAAAGTGAA...ATAATTCATATGAAATCTTGATATTAGTCCCCACACGGAAAAAGTGAACTGCAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
3UTR-3UTR CAA 90 bp GATCCTGAAGACGAGCTCTTACGACTTGATATGGGTATGTTGCTGCGACAGCAAACGAGCTCTTACGACTaGATATGGGTATGTTGCTGC +
Preference number: 3 (lower is better)
Translates to: DPEDELLRLDMGMLLRQQTSSYD*IWVCCC
Trigger: GCAGCAACATACCCATATCAAGTCGTAAGAGCTCGT...TTGCTGTCGCAGCAACATACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CAA 90 bp ACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGGAGCTTGTTGCTGCCTaGGGCAGATATACTGGAATT +
Preference number: 3 (lower is better)
Translates to: TKELVAALGRYTGIVLFEELVAA*GRYTGI
Trigger: AATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTC...CTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CAA 90 bp GCAGGCTGGAGTCACTCTAATCAAATTAGGAGCAATTCCCTTGTAAAATCCACCACGAGCTCTTACGACTaGATATGGGTATGTTGCTGC +
Preference number: 3 (lower is better)
Translates to: AGWSHSNQIRSNSLVKSTTSSYD*IWVCCC
Trigger: GCAGCAACATACCCATATCAAGTCGTAAGAGCTCGT...GGTGGATTTTACAAGGGAATTGCTCCTAATTTGATTAGAGTGACTCCAGCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CAA 90 bp ATTAGGAGCAATTCCCTTGTAAAATCCACCGACGCCTTCTTTCCTCCATGTCTTACACAAAAGAGCTTGTaGCTGCCTTGGGCAGATATA +
Preference number: 3 (lower is better)
Translates to: IRSNSLVKSTDAFFPPCLTQKSL*LPWADI
Trigger: TATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGT...AAGACATGGAGGAAAGAAGGCGTCGGTGGATTTTACAAGGGAATTGCTCCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CAA 90 bp GATCCTGAAGACGAGCTCTTACGACTTGATATGGGTATGTTGCTGCGACAGCAAGCTTCTGGTAATCTATaGATATGCTGGTTGTACTTC +
Preference number: 3 (lower is better)
Translates to: DPEDELLRLDMGMLLRQQASGNL*ICWLYF
Trigger: GAAGTACAACCAGCATATCAATAGATTACCAGAAGC...TTGCTGTCGCAGCAACATACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CAA 90 bp CTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTACACAAAAGAGCTTGTaGCTGCCTTGGGCAGATATA +
Preference number: 3 (lower is better)
Translates to: LKHKRACCCLGQIYWNCPTQKSL*LPWADI
Trigger: TATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGT...AGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CAA 90 bp AGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCTTACTTACTGTAAAACATGTGTaGATCCTGAAGACGAGCTCT +
Preference number: 3 (lower is better)
Translates to: SLLLPWADILELSSLSLLTVKHV*ILKTSS
Trigger: AGAGCTCGTCTTCAGGATCAACACATGTTTTACAGT...AAGTAAGCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CAA 90 bp TACATCTATTACACCACTGTAAAACATGTGTTGATCCTGAAGACGAGCTCTTACGAGCTTGTTGCTGCCTaGGGCAGATATACTGGAATT +
Preference number: 3 (lower is better)
Translates to: YIYYTTVKHVLILKTSSYELVAA*GRYTGI
Trigger: AATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTC...GTAAGAGCTCGTCTTCAGGATCAACACATGTTTTACAGTGGTGTAATAGATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CAA 90 bp AGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCTTACTTCTTGATATGGGTATGTaGCTGCGACAGCAAATATTT +
Preference number: 3 (lower is better)
Translates to: SLLLPWADILELSSLSLLLDMGM*LRQQIF
Trigger: AAATATTTGCTGTCGCAGCAACATACCCATATCAAG...AAGTAAGCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CAA 90 bp TGTGAGACGTTTTCATATACCACAAAGGTAATACAGCAGGCTGGAGTCACTCTAACTGTAAAACATGTGTaGATCCTGAAGACGAGCTCT +
Preference number: 3 (lower is better)
Translates to: CETFSYTTKVIQQAGVTLTVKHV*ILKTSS
Trigger: AGAGCTCGTCTTCAGGATCAACACATGTTTTACAGT...TAGAGTGACTCCAGCCTGCTGTATTACCTTTGTGGTATATGAAAACGTCTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR GCA 72 bp GATATGCTGGTTGTACTTCAACTTCAGCAATTCATATaGCATAAACTGAAGGGCACCATGCGATGTTCCAAA +
Preference number: 3 (lower is better)
Translates to: DMLVVLQLQQFI*HKLKGTMRCSK
Trigger: TTTGGAACATCGCATGGTGCCCTTCAGTTTATGGCATATGAATTGCTGAAGTTGAAGTACAACCAGCATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523866.1
3UTR-3UTR CAA 90 bp TTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATAGTTTTAACATTGTGTaGATGGCAGCCATTTCAGGC +
Preference number: 3 (lower is better)
Translates to: LCLKHKRACCCLGQIYWNSFNIV*MAAISG
Trigger: GCCTGAAATGGCTGCCATCAACACAATGTTAAAACT...ATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CAA 90 bp AAATCCACCGACGCCTTCTTTCCTCCATGTCTTTGTGATTACATCTATTACACCCTTGATATGGGTATGTaGCTGCGACAGCAAATATTT +
Preference number: 3 (lower is better)
Translates to: KSTDAFFPPCLCDYIYYTLDMGM*LRQQIF
Trigger: AAATATTTGCTGTCGCAGCAACATACCCATATCAAG...GGTGTAATAGATGTAATCACAAAGACATGGAGGAAAGAAGGCGTCGGTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CAA 90 bp GTATTCTGGCATCCTTTGGGTACAGGCCCTTTTATATTTATAGATGTCTACAATACGAGCTCTTACGACTaGATATGGGTATGTTGCTGC +
Preference number: 3 (lower is better)
Translates to: VFWHPLGTGPFIFIDVYNTSSYD*IWVCCC
Trigger: GCAGCAACATACCCATATCAAGTCGTAAGAGCTCGT...ATTGTAGACATCTATAAATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
3UTR-3UTR CAA 90 bp CTGCAGTTCACTTTTTCCGTGTGGGGACTAATATCAAGATTTCATATGAATTATGAGCTTGTTGCTGCCTaGGGCAGATATACTGGAATT +
Preference number: 3 (lower is better)
Translates to: LQFTFSVWGLISRFHMNYELVAA*GRYTGI
Trigger: AATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTC...ATAATTCATATGAAATCTTGATATTAGTCCCCACACGGAAAAAGTGAACTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
3UTR-3UTR CAA 90 bp AAATCCACCGACGCCTTCTTTCCTCCATGTCTTTGTGATTACATCTATTACACCCTATTGATATGCTGGTaGTACTTCAACTTCAGCAAT +
Preference number: 3 (lower is better)
Translates to: KSTDAFFPPCLCDYIYYTLLICW*YFNFSN
Trigger: ATTGCTGAAGTTGAAGTACAACCAGCATATCAATAG...GGTGTAATAGATGTAATCACAAAGACATGGAGGAAAGAAGGCGTCGGTGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523866.1
3UTR CCA 72 bp GACGTTTTCATATACCACAAAGGTAATACAGCAGGCTaGAGTCACTCTAATCAAATTAGGAGCAATTCCCTT +
Preference number: 3 (lower is better)
Translates to: DVFIYHKGNTAG*SHSNQIRSNSL
Trigger: AAGGGAATTGCTCCTAATTTGATTAGAGTGACTCCAGCCTGCTGTATTACCTTTGTGGTATATGAAAACGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR-3UTR CAA 90 bp GCAAATATTTTGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGACTGTAAAACATGTGTaGATCCTGAAGACGAGCTCT +
Preference number: 3 (lower is better)
Translates to: ANILDSAATDIYSTVLNWTVKHV*ILKTSS
Trigger: AGAGCTCGTCTTCAGGATCAACACATGTTTTACAGT...CCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCAAAATATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR TCA 72 bp ATTCTACTGTGCTCAACTGGGCTTCTGGTAATCTATTaGTATGCTGGTTGTACTTCAACTTCAGCAATTCAT +
Preference number: 3 (lower is better)
Translates to: ILLCSTGLLVIY*YAGCTSTSAIH
Trigger: ATGAATTGCTGAAGTTGAAGTACAACCAGCATATCAATAGATTACCAGAAGCCCAGTTGAGCACAGTAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523866.1
3UTR-3UTR CAA 90 bp GTATTCTGGCATCCTTTGGGTACAGGCCCTTTTATATTTATAGATGTCTACAATGCTTCTGGTAATCTATaGATATGCTGGTTGTACTTC +
Preference number: 3 (lower is better)
Translates to: VFWHPLGTGPFIFIDVYNASGNL*ICWLYF
Trigger: GAAGTACAACCAGCATATCAATAGATTACCAGAAGC...ATTGTAGACATCTATAAATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
3UTR TCA 72 bp GCAAATCAGCTTCCACCAATAAAACGTAGAAATCTGTaGAACTCTATCCTTCGTGTCAGTTTTAACATTGTG +
Preference number: 3 (lower is better)
Translates to: ANQLPPIKRRNL*NSILRVSFNIV
Trigger: CACAATGTTAAAACTGACACGAAGGATAGAGTTTCACAGATTTCTACGTTTTATTGGTGGAAGCTGATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp GATCCTGAAGACGAGCTCTTACGACTTGATATGGGTATGTTGCTGCGACAGCAACGTGGCGGAATACCGTaGTCCACGCCGACGACCCGG +
Preference number: 4 (lower is better)
Translates to: DPEDELLRLDMGMLLRQQRGGIP*STPTTR
Trigger: CCGGGTCGTCGGCGTGGAGCACGGTATTCCGCCACG...TTGCTGTCGCAGCAACATACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp GCAGCCATTTCAGGCAGAGGTAGCCAAGTTCCATATATATGGGGAAGGCAAAAAGACGCCGACTGGCCCTaGCCCGTCATAGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AAISGRGSQVPYIWGRQKDADWP*PVIGSG
Trigger: CCCCGAGCCTATGACGGGCCAGGGCCAGTCGGCGTC...TTTTTGCCTTCCCCATATATATGGAACTTGGCTACCTCTGCCTGAAATGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp TGGAGTCACTCTAATCAAATTAGGAGCAATTCCCTTGTAAAATCCACCGACGCCCAGTGGCCGCCACCGTaGCGACGGTCGCCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: WSHSNQIRSNSLVKSTDAQWPPP*RRSPLV
Trigger: CACAAGGGGCGACCGTCGCCACGGTGGCGGCCACTG...GGCGTCGGTGGATTTTACAAGGGAATTGCTCCTAATTTGATTAGAGTGACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp GCAGGCTGGAGTCACTCTAATCAAATTAGGAGCAATTCCCTTGTAAAATCCACCCAGTGGCCGCCACCGTaGCGACGGTCGCCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: AGWSHSNQIRSNSLVKSTQWPPP*RRSPLV
Trigger: CACAAGGGGCGACCGTCGCCACGGTGGCGGCCACTG...GGTGGATTTTACAAGGGAATTGCTCCTAATTTGATTAGAGTGACTCCAGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp CAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCCGGCGGAAAGCGCGATaGAGGGGAGGTCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QKSLLLPWADILELSSLSRRKAR*RGGPSL
Trigger: GAGGCTGGGACCTCCCCTCCATCGCGCTTTCCGCCG...GCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521645.5
CDS-3UTR TCA 90 bp CTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTGACGGTCGCCCCTTGTaGGCGCAACCCCACCTCCGG +
Preference number: 4 (lower is better)
Translates to: LKHKRACCCLGQIYWNCPDGRPL*AQPHLR
Trigger: CCGGAGGTGGGGTTGCGCTCACAAGGGGCGACCGTC...AGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp AAATCCACCGACGCCTTCTTTCCTCCATGTCTTTGTGATTACATCTATTACACCGACGGTCGCCCCTTGTaGGCGCAACCCCACCTCCGG +
Preference number: 4 (lower is better)
Translates to: KSTDAFFPPCLCDYIYYTDGRPL*AQPHLR
Trigger: CCGGAGGTGGGGTTGCGCTCACAAGGGGCGACCGTC...GGTGTAATAGATGTAATCACAAAGACATGGAGGAAAGAAGGCGTCGGTGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp ATTAGGAGCAATTCCCTTGTAAAATCCACCGACGCCTTCTTTCCTCCATGTCTTCGTGGCGGAATACCGTaGTCCACGCCGACGACCCGG +
Preference number: 4 (lower is better)
Translates to: IRSNSLVKSTDAFFPPCLRGGIP*STPTTR
Trigger: CCGGGTCGTCGGCGTGGAGCACGGTATTCCGCCACG...AAGACATGGAGGAAAGAAGGCGTCGGTGGATTTTACAAGGGAATTGCTCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp ACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCGTGGCGGAATACCGTaGTCCACGCCGACGACCCGG +
Preference number: 4 (lower is better)
Translates to: TKELVAALGRYTGIVLFERGGIP*STPTTR
Trigger: CCGGGTCGTCGGCGTGGAGCACGGTATTCCGCCACG...CTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp CTTCTTTTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACCCAGGGCCGCGGAGGTaGGACGCGATGCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LLLCLKHKRACCCLGQIYPGPRR*DAMQWP
Trigger: CGGCCACTGCATCGCGTCCCACCTCCGCGGCCCTGG...GTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAAAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp GATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAATCCAGGGCCGCGGAGGTaGGACGCGATGCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: DSAATDIYSTVLNWASGNPGPRR*DAMQWP
Trigger: CGGCCACTGCATCGCGTCCCACCTCCGCGGCCCTGG...ATTACCAGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp TGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAGACGCCGACTGGCCCTaGCCCGTCATAGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: WIVLQQIYILLCSTGLLVDADWP*PVIGSG
Trigger: CCCCGAGCCTATGACGGGCCAGGGCCAGTCGGCGTC...TACCAGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp TGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAGACCCGGACGCCGACTaGCCCTGGCCCGTCATAGGC +
Preference number: 4 (lower is better)
Translates to: WIVLQQIYILLCSTGLLVDPDAD*PWPVIG
Trigger: GCCTATGACGGGCCAGGGCCAGTCGGCGTCCGGGTC...TACCAGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp GATATGCTGGTTGTACTTCAACTTCAGCAATTCATATGCCATAAACTGAAGGGCCAGTGGCCGCCACCGTaGCGACGGTCGCCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: DMLVVLQLQQFICHKLKGQWPPP*RRSPLV
Trigger: CACAAGGGGCGACCGTCGCCACGGTGGCGGCCACTG...GCCCTTCAGTTTATGGCATATGAATTGCTGAAGTTGAAGTACAACCAGCATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523866.1
CDS-3UTR CCA 90 bp ATTTTGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTCCAGGGCCGCGGAGGTaGGACGCGATGCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: ILDSAATDIYSTVLNWASPGPRR*DAMQWP
Trigger: CGGCCACTGCATCGCGTCCCACCTCCGCGGCCCTGG...AGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp TATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGACGCCGACTGGCCCTaGCCCGTCATAGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: YALNTKELVAALGRYTGIDADWP*PVIGSG
Trigger: CCCCGAGCCTATGACGGGCCAGGGCCAGTCGGCGTC...AATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp TACCACAAAGGTAATACAGCAGGCTGGAGTCACTCTAATCAAATTAGGAGCAATGACCCGGACGCCGACTaGCCCTGGCCCGTCATAGGC +
Preference number: 4 (lower is better)
Translates to: YHKGNTAGWSHSNQIRSNDPDAD*PWPVIG
Trigger: GCCTATGACGGGCCAGGGCCAGTCGGCGTCCGGGTC...ATTGCTCCTAATTTGATTAGAGTGACTCCAGCCTGCTGTATTACCTTTGTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp GCAGCCATTTCAGGCAGAGGTAGCCAAGTTCCATATATATGGGGAAGGCAAAAATATGCCCAAGGCGCGTaGGCGAAGCCGGAGACTCTA +
Preference number: 4 (lower is better)
Translates to: AAISGRGSQVPYIWGRQKYAQGA*AKPETL
Trigger: TAGAGTCTCCGGCTTCGCTCACGCGCCTTGGGCATA...TTTTTGCCTTCCCCATATATATGGAACTTGGCTACCTCTGCCTGAAATGGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR GCA 90 bp AGCAGTTCTCTGGCTTCTAATGACTATAGAGCAATTTCGAATATGAGCCATGTTGGAGGTGGGACGCGATaGAGTGGCCGCCACCGTGGC +
Preference number: 4 (lower is better)
Translates to: SSSLASNDYRAISNMSHVGGGTR*SGRHRG
Trigger: GCCACGGTGGCGGCCACTGCATCGCGTCCCACCTCC...AACATGGCTCATATTCGAAATTGCTCTATAGTCATTAGAAGCCAGAGAACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp TATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTCGTGGCGGAATACCGTaGTCCACGCCGACGACCCGG +
Preference number: 4 (lower is better)
Translates to: YALNTKELVAALGRYTGIRGGIP*STPTTR
Trigger: CCGGGTCGTCGGCGTGGAGCACGGTATTCCGCCACG...AATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp GTATTCTGGCATCCTTTGGGTACAGGCCCTTTTATATTTATAGATGTCTACAATGGAGGTGGGACGCGATaGAGTGGCCGCCACCGTGGC +
Preference number: 4 (lower is better)
Translates to: VFWHPLGTGPFIFIDVYNGGGTR*SGRHRG
Trigger: GCCACGGTGGCGGCCACTGCATCGCGTCCCACCTCC...ATTGTAGACATCTATAAATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR GCA 90 bp GATCCTGAAGACGAGCTCTTACGACTTGATATGGGTATGTTGCTGCGACAGCAAACGAGGTCGAGCGGATaGAGCGCAAGGTTGGATAAG +
Preference number: 4 (lower is better)
Translates to: DPEDELLRLDMGMLLRQQTRSSG*SARLDK
Trigger: CTTATCCAACCTTGCGCTGCATCCGCTCGACCTCGT...TTGCTGTCGCAGCAACATACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp GTATTCTGGCATCCTTTGGGTACAGGCCCTTTTATATTTATAGATGTCTACAATCAGTGGCCGCCACCGTaGCGACGGTCGCCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: VFWHPLGTGPFIFIDVYNQWPPP*RRSPLV
Trigger: CACAAGGGGCGACCGTCGCCACGGTGGCGGCCACTG...ATTGTAGACATCTATAAATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CCA 90 bp GTATTCTGGCATCCTTTGGGTACAGGCCCTTTTATATTTATAGATGTCTACAATTGGGACGCGATGCAGTaGCCGCCACCGTGGCGACGG +
Preference number: 4 (lower is better)
Translates to: VFWHPLGTGPFIFIDVYNWDAMQ*PPPWRR
Trigger: CCGTCGCCACGGTGGCGGCCACTGCATCGCGTCCCA...ATTGTAGACATCTATAAATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CCA 90 bp GCAAATATTTTGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGACGCCGACTGGCCCTaGCCCGTCATAGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: ANILDSAATDIYSTVLNWDADWP*PVIGSG
Trigger: CCCCGAGCCTATGACGGGCCAGGGCCAGTCGGCGTC...CCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCAAAATATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp GTATTCTGGCATCCTTTGGGTACAGGCCCTTTTATATTTATAGATGTCTACAATGACCCGGACGCCGACTaGCCCTGGCCCGTCATAGGC +
Preference number: 4 (lower is better)
Translates to: VFWHPLGTGPFIFIDVYNDPDAD*PWPVIG
Trigger: GCCTATGACGGGCCAGGGCCAGTCGGCGTCCGGGTC...ATTGTAGACATCTATAAATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CCA 90 bp GCAGCCATTTCAGGCAGAGGTAGCCAAGTTCCATATATATGGGGAAGGCAAAAAGATGCAGCGCAAGGTTaGATAAGACGCCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: AAISGRGSQVPYIWGRQKDAAQG*IRRRRS
Trigger: TGAGCGGCGGCGTCTTATCCAACCTTGCGCTGCATC...TTTTTGCCTTCCCCATATATATGGAACTTGGCTACCTCTGCCTGAAATGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp GCGATGTTCCAAACAGCCCAGGAACAAATCCCTTATATAATCCACGCACACCTTGATGCAGCGCAAGGTTaGATAAGACGCCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: AMFQTAQEQIPYIIHAHLDAAQG*IRRRRS
Trigger: TGAGCGGCGGCGTCTTATCCAACCTTGCGCTGCATC...AAGGTGTGCGTGGATTATATAAGGGATTTGTTCCTGGGCTGTTTGGAACATCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523866.1
CDS-3UTR CCA 90 bp CTGCAGTTCACTTTTTCCGTGTGGGGACTAATATCAAGATTTCATATGAATTATGACCCGGACGCCGACTaGCCCTGGCCCGTCATAGGC +
Preference number: 4 (lower is better)
Translates to: LQFTFSVWGLISRFHMNYDPDAD*PWPVIG
Trigger: GCCTATGACGGGCCAGGGCCAGTCGGCGTCCGGGTC...ATAATTCATATGAAATCTTGATATTAGTCCCCACACGGAAAAAGTGAACTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR TCA 90 bp GATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAATTATGCCCAAGGCGCGTaGGCGAAGCCGGAGACTCTA +
Preference number: 4 (lower is better)
Translates to: DSAATDIYSTVLNWASGNYAQGA*AKPETL
Trigger: TAGAGTCTCCGGCTTCGCTCACGCGCCTTGGGCATA...ATTACCAGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
CDS-3UTR GCA 90 bp ACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGACGAGAGGACTCTTATaGCCAAGGCGCGTGAGCGAA +
Preference number: 4 (lower is better)
Translates to: TKELVAALGRYTGIVLFETRGLL*PRRVSE
Trigger: TTCGCTCACGCGCCTTGGGCATAAGAGTCCTCTCGT...CTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR GCA 90 bp TGGAGTCACTCTAATCAAATTAGGAGCAATTCCCTTGTAAAATCCACCGACGCCACGAGAGGACTCTTATaGCCAAGGCGCGTGAGCGAA +
Preference number: 4 (lower is better)
Translates to: WSHSNQIRSNSLVKSTDATRGLL*PRRVSE
Trigger: TTCGCTCACGCGCCTTGGGCATAAGAGTCCTCTCGT...GGCGTCGGTGGATTTTACAAGGGAATTGCTCCTAATTTGATTAGAGTGACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CCA 90 bp TGGAGTCACTCTAATCAAATTAGGAGCAATTCCCTTGTAAAATCCACCGACGCCTTCTCATACCGGACGTaGCGGAATACCGTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: WSHSNQIRSNSLVKSTDAFSYRT*RNTVLH
Trigger: GTGGAGCACGGTATTCCGCCACGTCCGGTATGAGAA...GGCGTCGGTGGATTTTACAAGGGAATTGCTCCTAATTTGATTAGAGTGACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp ATTAGGAGCAATTCCCTTGTAAAATCCACCGACGCCTTCTTTCCTCCATGTCTTTTCTCATACCGGACGTaGCGGAATACCGTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: IRSNSLVKSTDAFFPPCLFSYRT*RNTVLH
Trigger: GTGGAGCACGGTATTCCGCCACGTCCGGTATGAGAA...AAGACATGGAGGAAAGAAGGCGTCGGTGGATTTTACAAGGGAATTGCTCCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp CTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTGATGCAGCGCAAGGTTaGATAAGACGCCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: LKHKRACCCLGQIYWNCPDAAQG*IRRRRS
Trigger: TGAGCGGCGGCGTCTTATCCAACCTTGCGCTGCATC...AGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp GATCCTGAAGACGAGCTCTTACGACTTGATATGGGTATGTTGCTGCGACAGCAATTCCCAATTCTAAAATaGTCTGGCCAGGCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: DPEDELLRLDMGMLLRQQFPILK*SGQAQW
Trigger: CCACTGCGCCTGGCCAGACCATTTTAGAATTGGGAA...TTGCTGTCGCAGCAACATACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
CDS-3UTR TCA 90 bp TACATCTATTACACCACTGTAAAACATGTGTTGATCCTGAAGACGAGCTCTTACTATGCCCAAGGCGCGTaGGCGAAGCCGGAGACTCTA +
Preference number: 4 (lower is better)
Translates to: YIYYTTVKHVLILKTSSYYAQGA*AKPETL
Trigger: TAGAGTCTCCGGCTTCGCTCACGCGCCTTGGGCATA...GTAAGAGCTCGTCTTCAGGATCAACACATGTTTTACAGTGGTGTAATAGATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
CDS-3UTR GCA 90 bp ACGAGCTCTTACGACTTGATATGGGTATGTTGCTGCGACAGCAAATATTTTGGAACGAGAGGACTCTTATaGCCAAGGCGCGTGAGCGAA +
Preference number: 4 (lower is better)
Translates to: TSSYDLIWVCCCDSKYFGTRGLL*PRRVSE
Trigger: TTCGCTCACGCGCCTTGGGCATAAGAGTCCTCTCGT...TCCAAAATATTTGCTGTCGCAGCAACATACCCATATCAAGTCGTAAGAGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CCA 90 bp TGTGAGACGTTTTCATATACCACAAAGGTAATACAGCAGGCTGGAGTCACTCTATTCTCATACCGGACGTaGCGGAATACCGTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: CETFSYTTKVIQQAGVTLFSYRT*RNTVLH
Trigger: GTGGAGCACGGTATTCCGCCACGTCCGGTATGAGAA...TAGAGTGACTCCAGCCTGCTGTATTACCTTTGTGGTATATGAAAACGTCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp ATTAGGAGCAATTCCCTTGTAAAATCCACCGACGCCTTCTTTCCTCCATGTCTTCGAGCTCTTACGACTTaGTATGGGTATGTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: IRSNSLVKSTDAFFPPCLRALTT*YGYVAA
Trigger: CGCAGCAACATACCCATATCAAGTCGTAAGAGCTCG...AAGACATGGAGGAAAGAAGGCGTCGGTGGATTTTACAAGGGAATTGCTCCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp CATAAACTGAAGGGCACCATGCGATGTTCCAAACAGCCCAGGAACAAATCCCTTCACAAAAGAGCTTGTTaGTGCCTTGGGCAGATATAC +
Preference number: 4 (lower is better)
Translates to: HKLKGTMRCSKQPRNKSLHKRAC*CLGQIY
Trigger: GTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTG...AAGGGATTTGTTCCTGGGCTGTTTGGAACATCGCATGGTGCCCTTCAGTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523866.1
CDS-3UTR CCA 90 bp GACGCCTTCTTTCCTCCATGTCTTTGTGATTACATCTATTACACCACTGTAAAAGATGCAGCGCAAGGTTaGATAAGACGCCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: DAFFPPCLCDYIYYTTVKDAAQG*IRRRRS
Trigger: TGAGCGGCGGCGTCTTATCCAACCTTGCGCTGCATC...TTTTACAGTGGTGTAATAGATGTAATCACAAAGACATGGAGGAAAGAAGGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp GCAGCCATTTCAGGCAGAGGTAGCCAAGTTCCATATATATGGGGAAGGCAAAAATCATATGCCATAAACTaGAGGGCACCATGCGATGTT +
Preference number: 4 (lower is better)
Translates to: AAISGRGSQVPYIWGRQKSYAIN*RAPCDV
Trigger: AACATCGCATGGTGCCCTTCAGTTTATGGCATATGA...TTTTTGCCTTCCCCATATATATGGAACTTGGCTACCTCTGCCTGAAATGGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp CAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCTCCTGGCTAACATGGTaGAACCCCATTTCTACTCAA +
Preference number: 4 (lower is better)
Translates to: QKSLLLPWADILELSSLSSWLTW*NPISTQ
Trigger: TTGAGTAGAAATGGGGTTTCACCATGTTAGCCAGGA...GCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR GCA 90 bp AGCAGTTCTCTGGCTTCTAATGACTATAGAGCAATTTCGAATATGAGCCATGTTACGAGGTCGAGCGGATaGAGCGCAAGGTTGGATAAG +
Preference number: 4 (lower is better)
Translates to: SSSLASNDYRAISNMSHVTRSSG*SARLDK
Trigger: CTTATCCAACCTTGCGCTGCATCCGCTCGACCTCGT...AACATGGCTCATATTCGAAATTGCTCTATAGTCATTAGAAGCCAGAGAACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp CAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCCACAAAAGAGCTTGTTaGTGCCTTGGGCAGATATAC +
Preference number: 4 (lower is better)
Translates to: QKSLLLPWADILELSSLSHKRAC*CLGQIY
Trigger: GTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTG...GCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp CAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCTCTTACGACTTGATATaGGTATGTTGCTGCGACAGC +
Preference number: 4 (lower is better)
Translates to: QKSLLLPWADILELSSLSSYDLI*VCCCDS
Trigger: GCTGTCGCAGCAACATACCCATATCAAGTCGTAAGA...GCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp CACTGTAAAACATGTGTTGATCCTGAAGACGAGCTCTTACGACTTGATATGGGTTTCCCAATTCTAAAATaGTCTGGCCAGGCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: HCKTCVDPEDELLRLDMGFPILK*SGQAQW
Trigger: CCACTGCGCCTGGCCAGACCATTTTAGAATTGGGAA...ACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATCAACACATGTTTTACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
CDS-3UTR TCA 90 bp TTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATCGAGCTCTTACGACTTaGTATGGGTATGTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: LCLKHKRACCCLGQIYWNRALTT*YGYVAA
Trigger: CGCAGCAACATACCCATATCAAGTCGTAAGAGCTCG...ATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp TATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTCGAGCTCTTACGACTTaGTATGGGTATGTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: YALNTKELVAALGRYTGIRALTT*YGYVAA
Trigger: CGCAGCAACATACCCATATCAAGTCGTAAGAGCTCG...AATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp GTTTTCATATACCACAAAGGTAATACAGCAGGCTGGAGTCACTCTAATCAAATTACGAGGTCGAGCGGATaGAGCGCAAGGTTGGATAAG +
Preference number: 4 (lower is better)
Translates to: VFIYHKGNTAGWSHSNQITRSSG*SARLDK
Trigger: CTTATCCAACCTTGCGCTGCATCCGCTCGACCTCGT...AATTTGATTAGAGTGACTCCAGCCTGCTGTATTACCTTTGTGGTATATGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp GCAGCCATTTCAGGCAGAGGTAGCCAAGTTCCATATATATGGGGAAGGCAAAAACTTCAGCAATTCATATaGCATAAACTGAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: AAISGRGSQVPYIWGRQKLQQFI*HKLKGT
Trigger: GGTGCCCTTCAGTTTATGGCATATGAATTGCTGAAG...TTTTTGCCTTCCCCATATATATGGAACTTGGCTACCTCTGCCTGAAATGGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp GATCCTGAAGACGAGCTCTTACGACTTGATATGGGTATGTTGCTGCGACAGCAATTTATATTGTCGGTGTaGGGAGTTAACAACAGCATC +
Preference number: 4 (lower is better)
Translates to: DPEDELLRLDMGMLLRQQFILSV*GVNNSI
Trigger: GATGCTGTTGTTAACTCCCCACACCGACAATATAAA...TTGCTGTCGCAGCAACATACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523866.1
CDS-3UTR CCA 90 bp CAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCTCTACTGTGCTCAACTaGGCTTCTGGTAATCTATTG +
Preference number: 4 (lower is better)
Translates to: QKSLLLPWADILELSSLSSTVLN*ASGNLL
Trigger: CAATAGATTACCAGAAGCCCAGTTGAGCACAGTAGA...GCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp AGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCTTACTTTCTTACGACTTGATATaGGTATGTTGCTGCGACAGC +
Preference number: 4 (lower is better)
Translates to: SLLLPWADILELSSLSLLSYDLI*VCCCDS
Trigger: GCTGTCGCAGCAACATACCCATATCAAGTCGTAAGA...AAGTAAGCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp GGGCACCATGCGATGTTCCAAACAGCCCAGGAACAAATCCCTTATATAATCCACGGTAATACAGCAGGCTaGAGTCACTCTAATCAAATT +
Preference number: 4 (lower is better)
Translates to: GHHAMFQTAQEQIPYIIHGNTAG*SHSNQI
Trigger: AATTTGATTAGAGTGACTCCAGCCTGCTGTATTACC...GTGGATTATATAAGGGATTTGTTCCTGGGCTGTTTGGAACATCGCATGGTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523866.1
CDS-3UTR CCA 90 bp TATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTTTCCCAATTCTAAAATaGTCTGGCCAGGCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: YALNTKELVAALGRYTGIFPILK*SGQAQW
Trigger: CCACTGCGCCTGGCCAGACCATTTTAGAATTGGGAA...AATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
3UTR CAA 72 bp CCTGAAGACGAGCTCTTACGACTTGATATGGGTATGTaGCTGCGACAGCAAATATTTTGGATAGTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PEDELLRLDMGM*LRQQIFWIVLQ
Trigger: TTGCAGCACTATCCAAAATATTTGCTGTCGCAGCAACATACCCATATCAAGTCGTAAGAGCTCGTCTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp CACTGTAAAACATGTGTTGATCCTGAAGACGAGCTCTTACGACTTGATATGGGTTCATATGCCATAAACTaGAGGGCACCATGCGATGTT +
Preference number: 4 (lower is better)
Translates to: HCKTCVDPEDELLRLDMGSYAIN*RAPCDV
Trigger: AACATCGCATGGTGCCCTTCAGTTTATGGCATATGA...ACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATCAACACATGTTTTACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp GATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAATCTATTGATATGCTGGCGAGCTCTTACGACTTaGTATGGGTATGTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: DIYSTVLNWASGNLLICWRALTT*YGYVAA
Trigger: CGCAGCAACATACCCATATCAAGTCGTAAGAGCTCG...CCAGCATATCAATAGATTACCAGAAGCCCAGTTGAGCACAGTAGAATATATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp TGGAGTCACTCTAATCAAATTAGGAGCAATTCCCTTGTAAAATCCACCGACGCCGTTTTAACATTGTGTTaGTGGCAGCCATTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: WSHSNQIRSNSLVKSTDAVLTLC*WQPFQA
Trigger: TGCCTGAAATGGCTGCCATCAACACAATGTTAAAAC...GGCGTCGGTGGATTTTACAAGGGAATTGCTCCTAATTTGATTAGAGTGACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp GCAGCCATTTCAGGCAGAGGTAGCCAAGTTCCATATATATGGGGAAGGCAAAAAATGCTAAATAAAGGTTaGCACAGCTGGATCCTAGAA +
Preference number: 4 (lower is better)
Translates to: AAISGRGSQVPYIWGRQKMLNKG*HSWILE
Trigger: TTCTAGGATCCAGCTGTGTCAACCTTTATTTAGCAT...TTTTTGCCTTCCCCATATATATGGAACTTGGCTACCTCTGCCTGAAATGGCTGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR GCA 90 bp CTGCAGTTCACTTTTTCCGTGTGGGGACTAATATCAAGATTTCATATGAATTATACGAGGTCGAGCGGATaGAGCGCAAGGTTGGATAAG +
Preference number: 4 (lower is better)
Translates to: LQFTFSVWGLISRFHMNYTRSSG*SARLDK
Trigger: CTTATCCAACCTTGCGCTGCATCCGCTCGACCTCGT...ATAATTCATATGAAATCTTGATATTAGTCCCCACACGGAAAAAGTGAACTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR GCA 90 bp GCAGGCTGGAGTCACTCTAATCAAATTAGGAGCAATTCCCTTGTAAAATCCACCCTTCAGCAATTCATATaGCATAAACTGAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: AGWSHSNQIRSNSLVKSTLQQFI*HKLKGT
Trigger: GGTGCCCTTCAGTTTATGGCATATGAATTGCTGAAG...GGTGGATTTTACAAGGGAATTGCTCCTAATTTGATTAGAGTGACTCCAGCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp CTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTAAAAGAGCTTGTTGCTaGCTTGGGCAGATATACTGG +
Preference number: 4 (lower is better)
Translates to: LKHKRACCCLGQIYWNCPKRACC*LGQIYW
Trigger: CCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTT...AGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp TGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAAAAAGAGCTTGTTGCTaGCTTGGGCAGATATACTGG +
Preference number: 4 (lower is better)
Translates to: WIVLQQIYILLCSTGLLVKRACC*LGQIYW
Trigger: CCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTT...TACCAGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp GTTGTACTTCAACTTCAGCAATTCATATGCCATAAACTGAAGGGCACCATGCGAAAAAGAGCTTGTTGCTaGCTTGGGCAGATATACTGG +
Preference number: 4 (lower is better)
Translates to: VVLQLQQFICHKLKGTMRKRACC*LGQIYW
Trigger: CCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTT...TCGCATGGTGCCCTTCAGTTTATGGCATATGAATTGCTGAAGTTGAAGTACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523866.1
CDS-3UTR GCA 90 bp TGTGAGACGTTTTCATATACCACAAAGGTAATACAGCAGGCTGGAGTCACTCTACACAAAAGAGCTTGTTaGTGCCTTGGGCAGATATAC +
Preference number: 4 (lower is better)
Translates to: CETFSYTTKVIQQAGVTLHKRAC*CLGQIY
Trigger: GTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTG...TAGAGTGACTCCAGCCTGCTGTATTACCTTTGTGGTATATGAAAACGTCTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp GATCCTGAAGACGAGCTCTTACGACTTGATATGGGTATGTTGCTGCGACAGCAACCATTTAGCAAATGTTaGAAATCAGCTTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: DPEDELLRLDMGMLLRQQPFSKC*KSASTN
Trigger: ATTGGTGGAAGCTGATTTGCAACATTTGCTAAATGG...TTGCTGTCGCAGCAACATACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp CTGCAGTTCACTTTTTCCGTGTGGGGACTAATATCAAGATTTCATATGAATTATTTCTCATACCGGACGTaGCGGAATACCGTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LQFTFSVWGLISRFHMNYFSYRT*RNTVLH
Trigger: GTGGAGCACGGTATTCCGCCACGTCCGGTATGAGAA...ATAATTCATATGAAATCTTGATATTAGTCCCCACACGGAAAAAGTGAACTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CCA 90 bp CAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCTGCACCCCATATATTTaGGGTTACTCCTTGATAAAG +
Preference number: 4 (lower is better)
Translates to: QKSLLLPWADILELSSLSCTPYI*GYSLIK
Trigger: CTTTATCAAGGAGTAACCCCAAATATATGGGGTGCA...GCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp TGTGAGACGTTTTCATATACCACAAAGGTAATACAGCAGGCTGGAGTCACTCTATCTTACGACTTGATATaGGTATGTTGCTGCGACAGC +
Preference number: 4 (lower is better)
Translates to: CETFSYTTKVIQQAGVTLSYDLI*VCCCDS
Trigger: GCTGTCGCAGCAACATACCCATATCAAGTCGTAAGA...TAGAGTGACTCCAGCCTGCTGTATTACCTTTGTGGTATATGAAAACGTCTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp CAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCAAAATACTAGTATTCTaGCATCCTTTGGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: QKSLLLPWADILELSSLSKILVF*HPLGTG
Trigger: GCCTGTACCCAAAGGATGCCAGAATACTAGTATTTT...GCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR TCA 90 bp TTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTCATATGCCATAAACTaGAGGGCACCATGCGATGTT +
Preference number: 4 (lower is better)
Translates to: LCLKHKRACCCLGQIYWNSYAIN*RAPCDV
Trigger: AACATCGCATGGTGCCCTTCAGTTTATGGCATATGA...ATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp TGGAGTCACTCTAATCAAATTAGGAGCAATTCCCTTGTAAAATCCACCGACGCCTCCTCCATGTCTTTGTaGTTACATCTATTACACCAC +
Preference number: 4 (lower is better)
Translates to: WSHSNQIRSNSLVKSTDASSMSL*LHLLHH
Trigger: GTGGTGTAATAGATGTAATCACAAAGACATGGAGGA...GGCGTCGGTGGATTTTACAAGGGAATTGCTCCTAATTTGATTAGAGTGACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp CACTGTAAAACATGTGTTGATCCTGAAGACGAGCTCTTACGACTTGATATGGGTGTTTTAACATTGTGTTaGTGGCAGCCATTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: HCKTCVDPEDELLRLDMGVLTLC*WQPFQA
Trigger: TGCCTGAAATGGCTGCCATCAACACAATGTTAAAAC...ACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATCAACACATGTTTTACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp GCAGGCTGGAGTCACTCTAATCAAATTAGGAGCAATTCCCTTGTAAAATCCACCAAACGTAGAAATCTGTaGAACTCTATCCTTCGTGTC +
Preference number: 4 (lower is better)
Translates to: AGWSHSNQIRSNSLVKSTKRRNL*NSILRV
Trigger: GACACGAAGGATAGAGTTTCACAGATTTCTACGTTT...GGTGGATTTTACAAGGGAATTGCTCCTAATTTGATTAGAGTGACTCCAGCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp TATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTTCCTGGCTAACATGGTaGAACCCCATTTCTACTCAA +
Preference number: 4 (lower is better)
Translates to: YALNTKELVAALGRYTGISWLTW*NPISTQ
Trigger: TTGAGTAGAAATGGGGTTTCACCATGTTAGCCAGGA...AATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR GCA 90 bp GCAGCCATTTCAGGCAGAGGTAGCCAAGTTCCATATATATGGGGAAGGCAAAAAATATATATTCTACTGTaGTCAACTGGGCTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: AAISGRGSQVPYIWGRQKIYILL*STGLLV
Trigger: TACCAGAAGCCCAGTTGAGCACAGTAGAATATATAT...TTTTTGCCTTCCCCATATATATGGAACTTGGCTACCTCTGCCTGAAATGGCTGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp CTTCTTTTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACAAAAGAGCTTGTTGCTaGCTTGGGCAGATATACTGG +
Preference number: 4 (lower is better)
Translates to: LLLCLKHKRACCCLGQIYKRACC*LGQIYW
Trigger: CCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTT...GTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp CAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCCCATTTAGCAAATGTTaGAAATCAGCTTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: QKSLLLPWADILELSSLSPFSKC*KSASTN
Trigger: ATTGGTGGAAGCTGATTTGCAACATTTGCTAAATGG...GCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp ACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGTGCACCCCATATATTTaGGGTTACTCCTTGATAAAG +
Preference number: 4 (lower is better)
Translates to: TKELVAALGRYTGIVLFECTPYI*GYSLIK
Trigger: CTTTATCAAGGAGTAACCCCAAATATATGGGGTGCA...CTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp TATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTTCTTACGACTTGATATaGGTATGTTGCTGCGACAGC +
Preference number: 4 (lower is better)
Translates to: YALNTKELVAALGRYTGISYDLI*VCCCDS
Trigger: GCTGTCGCAGCAACATACCCATATCAAGTCGTAAGA...AATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp CTTCTTTTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACAGCTTGTTGCTGCCTTaGGCAGATATACTGGAATTG +
Preference number: 4 (lower is better)
Translates to: LLLCLKHKRACCCLGQIYSLLLP*ADILEL
Trigger: CAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCT...GTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp ACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGTATTCTGGCATCCTTTaGGTACAGGCCCTTTTATAT +
Preference number: 4 (lower is better)
Translates to: TKELVAALGRYTGIVLFEYSGIL*VQALLY
Trigger: ATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATA...CTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
3UTR CAA 72 bp AAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATaGTCCTCTTTGAGCTTACTTTCTCTTTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: KSLLLPWADILE*SSLSLLSLFSK
Trigger: CTTAGAGAAAAGAGAAAGTAAGCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp ATTTTGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTTCATATGCCATAAACTaGAGGGCACCATGCGATGTT +
Preference number: 4 (lower is better)
Translates to: ILDSAATDIYSTVLNWASSYAIN*RAPCDV
Trigger: AACATCGCATGGTGCCCTTCAGTTTATGGCATATGA...AGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp ATTAGGAGCAATTCCCTTGTAAAATCCACCGACGCCTTCTTTCCTCCATGTCTTCTTCTGGTAATCTATTaGTATGCTGGTTGTACTTCA +
Preference number: 4 (lower is better)
Translates to: IRSNSLVKSTDAFFPPCLLLVIY*YAGCTS
Trigger: TGAAGTACAACCAGCATATCAATAGATTACCAGAAG...AAGACATGGAGGAAAGAAGGCGTCGGTGGATTTTACAAGGGAATTGCTCCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp TTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATGTTTTAACATTGTGTTaGTGGCAGCCATTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LCLKHKRACCCLGQIYWNVLTLC*WQPFQA
Trigger: TGCCTGAAATGGCTGCCATCAACACAATGTTAAAAC...ATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp CACTGTAAAACATGTGTTGATCCTGAAGACGAGCTCTTACGACTTGATATGGGTATGCTAAATAAAGGTTaGCACAGCTGGATCCTAGAA +
Preference number: 4 (lower is better)
Translates to: HCKTCVDPEDELLRLDMGMLNKG*HSWILE
Trigger: TTCTAGGATCCAGCTGTGTCAACCTTTATTTAGCAT...ACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATCAACACATGTTTTACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
CDS-3UTR GCA 90 bp CAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCGGTAATCTATTGATATaGTGGTTGTACTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: QKSLLLPWADILELSSLSGNLLI*WLYFNF
Trigger: GAAGTTGAAGTACAACCAGCATATCAATAGATTACC...GCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp AGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCTTACTTATATATATTCTACTGTaGTCAACTGGGCTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: SLLLPWADILELSSLSLLIYILL*STGLLV
Trigger: TACCAGAAGCCCAGTTGAGCACAGTAGAATATATAT...AAGTAAGCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp GCGATGTTCCAAACAGCCCAGGAACAAATCCCTTATATAATCCACGCACACCTTTTGATATGGGTATGTTaGTGCGACAGCAAATATTTT +
Preference number: 4 (lower is better)
Translates to: AMFQTAQEQIPYIIHAHLLIWVC*CDSKYF
Trigger: AAAATATTTGCTGTCGCAGCAACATACCCATATCAA...AAGGTGTGCGTGGATTATATAAGGGATTTGTTCCTGGGCTGTTTGGAACATCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523866.1
CDS-3UTR GCA 90 bp TACATCTATTACACCACTGTAAAACATGTGTTGATCCTGAAGACGAGCTCTTACCACAAAAGAGCTTGTTaGTGCCTTGGGCAGATATAC +
Preference number: 4 (lower is better)
Translates to: YIYYTTVKHVLILKTSSYHKRAC*CLGQIY
Trigger: GTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTG...GTAAGAGCTCGTCTTCAGGATCAACACATGTTTTACAGTGGTGTAATAGATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp GATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAATTCTACTGTGCTCAACTaGGCTTCTGGTAATCTATTG +
Preference number: 4 (lower is better)
Translates to: DSAATDIYSTVLNWASGNSTVLN*ASGNLL
Trigger: CAATAGATTACCAGAAGCCCAGTTGAGCACAGTAGA...ATTACCAGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp GATATGCTGGTTGTACTTCAACTTCAGCAATTCATATGCCATAAACTGAAGGGCTCTACTGTGCTCAACTaGGCTTCTGGTAATCTATTG +
Preference number: 4 (lower is better)
Translates to: DMLVVLQLQQFICHKLKGSTVLN*ASGNLL
Trigger: CAATAGATTACCAGAAGCCCAGTTGAGCACAGTAGA...GCCCTTCAGTTTATGGCATATGAATTGCTGAAGTTGAAGTACAACCAGCATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523866.1
CDS-3UTR CCA 90 bp TACATCTATTACACCACTGTAAAACATGTGTTGATCCTGAAGACGAGCTCTTACAGCTTGTTGCTGCCTTaGGCAGATATACTGGAATTG +
Preference number: 4 (lower is better)
Translates to: YIYYTTVKHVLILKTSSYSLLLP*ADILEL
Trigger: CAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCT...GTAAGAGCTCGTCTTCAGGATCAACACATGTTTTACAGTGGTGTAATAGATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp CTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTTATTCTGGCATCCTTTaGGTACAGGCCCTTTTATAT +
Preference number: 4 (lower is better)
Translates to: LKHKRACCCLGQIYWNCPYSGIL*VQALLY
Trigger: ATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATA...AGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CCA 90 bp ACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGGTGCAACAGCACTCGTaGATGTTTACGATAAATAAA +
Preference number: 4 (lower is better)
Translates to: TKELVAALGRYTGIVLFEVQQHS*MFTINK
Trigger: TTTATTTATCGTAAACATCCACGAGTGCTGTTGCAC...CTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR TCA 90 bp GTTGTACTTCAACTTCAGCAATTCATATGCCATAAACTGAAGGGCACCATGCGACTTCTGGTAATCTATTaGTATGCTGGTTGTACTTCA +
Preference number: 4 (lower is better)
Translates to: VVLQLQQFICHKLKGTMRLLVIY*YAGCTS
Trigger: TGAAGTACAACCAGCATATCAATAGATTACCAGAAG...TCGCATGGTGCCCTTCAGTTTATGGCATATGAATTGCTGAAGTTGAAGTACAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523866.1
CDS-3UTR TCA 90 bp GTATTCTGGCATCCTTTGGGTACAGGCCCTTTTATATTTATAGATGTCTACAATTCCTGGCTAACATGGTaGAACCCCATTTCTACTCAA +
Preference number: 4 (lower is better)
Translates to: VFWHPLGTGPFIFIDVYNSWLTW*NPISTQ
Trigger: TTGAGTAGAAATGGGGTTTCACCATGTTAGCCAGGA...ATTGTAGACATCTATAAATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR TCA 90 bp TATACCACAAAGGTAATACAGCAGGCTGGAGTCACTCTAATCAAATTAGGAGCAATGCTAAATAAAGGTTaGCACAGCTGGATCCTAGAA +
Preference number: 4 (lower is better)
Translates to: YTTKVIQQAGVTLIKLGAMLNKG*HSWILE
Trigger: TTCTAGGATCCAGCTGTGTCAACCTTTATTTAGCAT...TGCTCCTAATTTGATTAGAGTGACTCCAGCCTGCTGTATTACCTTTGTGGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
CDS-3UTR GCA 90 bp GACGCCTTCTTTCCTCCATGTCTTTGTGATTACATCTATTACACCACTGTAAAACTTCAGCAATTCATATaGCATAAACTGAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: DAFFPPCLCDYIYYTTVKLQQFI*HKLKGT
Trigger: GGTGCCCTTCAGTTTATGGCATATGAATTGCTGAAG...TTTTACAGTGGTGTAATAGATGTAATCACAAAGACATGGAGGAAAGAAGGCGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp ACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGGGTAATCTATTGATATaGTGGTTGTACTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: TKELVAALGRYTGIVLFEGNLLI*WLYFNF
Trigger: GAAGTTGAAGTACAACCAGCATATCAATAGATTACC...CTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp ACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGTTGATATGGGTATGTTaGTGCGACAGCAAATATTTT +
Preference number: 4 (lower is better)
Translates to: TKELVAALGRYTGIVLFELIWVC*CDSKYF
Trigger: AAAATATTTGCTGTCGCAGCAACATACCCATATCAA...CTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp AGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCTTACTTTTGATATGGGTATGTTaGTGCGACAGCAAATATTTT +
Preference number: 4 (lower is better)
Translates to: SLLLPWADILELSSLSLLLIWVC*CDSKYF
Trigger: AAAATATTTGCTGTCGCAGCAACATACCCATATCAA...AAGTAAGCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp CACTGTAAAACATGTGTTGATCCTGAAGACGAGCTCTTACGACTTGATATGGGTCCATTTAGCAAATGTTaGAAATCAGCTTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: HCKTCVDPEDELLRLDMGPFSKC*KSASTN
Trigger: ATTGGTGGAAGCTGATTTGCAACATTTGCTAAATGG...ACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATCAACACATGTTTTACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp TACCACAAAGGTAATACAGCAGGCTGGAGTCACTCTAATCAAATTAGGAGCAATTGCACCCCATATATTTaGGGTTACTCCTTGATAAAG +
Preference number: 4 (lower is better)
Translates to: YHKGNTAGWSHSNQIRSNCTPYI*GYSLIK
Trigger: CTTTATCAAGGAGTAACCCCAAATATATGGGGTGCA...ATTGCTCCTAATTTGATTAGAGTGACTCCAGCCTGCTGTATTACCTTTGTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp TATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTTTTATATTGTCGGTGTaGGGAGTTAACAACAGCATC +
Preference number: 4 (lower is better)
Translates to: YALNTKELVAALGRYTGIFILSV*GVNNSI
Trigger: GATGCTGTTGTTAACTCCCCACACCGACAATATAAA...AATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297578.9
ENST00000523866.1
CDS-3UTR CCA 90 bp GATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAATGGTAATACAGCAGGCTaGAGTCACTCTAATCAAATT +
Preference number: 4 (lower is better)
Translates to: DSAATDIYSTVLNWASGNGNTAG*SHSNQI
Trigger: AATTTGATTAGAGTGACTCCAGCCTGCTGTATTACC...ATTACCAGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp GATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAATTATTCTGGCATCCTTTaGGTACAGGCCCTTTTATAT +
Preference number: 4 (lower is better)
Translates to: DSAATDIYSTVLNWASGNYSGIL*VQALLY
Trigger: ATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATA...ATTACCAGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CCA 90 bp TTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATAAAATACTAGTATTCTaGCATCCTTTGGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: LCLKHKRACCCLGQIYWNKILVF*HPLGTG
Trigger: GCCTGTACCCAAAGGATGCCAGAATACTAGTATTTT...ATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
3UTR CAA 72 bp AAACATGTGTTGATCCTGAAGACGAGCTCTTACGACTaGATATGGGTATGTTGCTGCGACAGCAAATATTTT +
Preference number: 4 (lower is better)
Translates to: KHVLILKTSSYD*IWVCCCDSKYF
Trigger: AAAATATTTGCTGTCGCAGCAACATACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATCAACACATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR CAA 72 bp TTTTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTaGGGCAGATATACTGGAATTGTCCTCTTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: FYALNTKELVAA*GRYTGIVLFEL
Trigger: AAGCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp GATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAATCTTCTGGTAATCTATTaGTATGCTGGTTGTACTTCA +
Preference number: 4 (lower is better)
Translates to: DSAATDIYSTVLNWASGNLLVIY*YAGCTS
Trigger: TGAAGTACAACCAGCATATCAATAGATTACCAGAAG...ATTACCAGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp GATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAATCTATTGATATGCTGGTCCTCCATGTCTTTGTaGTTACATCTATTACACCAC +
Preference number: 4 (lower is better)
Translates to: DIYSTVLNWASGNLLICWSSMSL*LHLLHH
Trigger: GTGGTGTAATAGATGTAATCACAAAGACATGGAGGA...CCAGCATATCAATAGATTACCAGAAGCCCAGTTGAGCACAGTAGAATATATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp GTATTCTGGCATCCTTTGGGTACAGGCCCTTTTATATTTATAGATGTCTACAATGTTTTAACATTGTGTTaGTGGCAGCCATTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: VFWHPLGTGPFIFIDVYNVLTLC*WQPFQA
Trigger: TGCCTGAAATGGCTGCCATCAACACAATGTTAAAAC...ATTGTAGACATCTATAAATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR TCA 90 bp AGCAGTTCTCTGGCTTCTAATGACTATAGAGCAATTTCGAATATGAGCCATGTTAAACGTAGAAATCTGTaGAACTCTATCCTTCGTGTC +
Preference number: 4 (lower is better)
Translates to: SSSLASNDYRAISNMSHVKRRNL*NSILRV
Trigger: GACACGAAGGATAGAGTTTCACAGATTTCTACGTTT...AACATGGCTCATATTCGAAATTGCTCTATAGTCATTAGAAGCCAGAGAACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp ATTTTGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTAAACGTAGAAATCTGTaGAACTCTATCCTTCGTGTC +
Preference number: 4 (lower is better)
Translates to: ILDSAATDIYSTVLNWASKRRNL*NSILRV
Trigger: GACACGAAGGATAGAGTTTCACAGATTTCTACGTTT...AGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp GACGCCTTCTTTCCTCCATGTCTTTGTGATTACATCTATTACACCACTGTAAAAAAACGTAGAAATCTGTaGAACTCTATCCTTCGTGTC +
Preference number: 4 (lower is better)
Translates to: DAFFPPCLCDYIYYTTVKKRRNL*NSILRV
Trigger: GACACGAAGGATAGAGTTTCACAGATTTCTACGTTT...TTTTACAGTGGTGTAATAGATGTAATCACAAAGACATGGAGGAAAGAAGGCGTC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp CTTCTTTTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACATATGGGTATGTTGCTaGGACAGCAAATATTTTGGA +
Preference number: 4 (lower is better)
Translates to: LLLCLKHKRACCCLGQIYIWVCC*DSKYFG
Trigger: TCCAAAATATTTGCTGTCGCAGCAACATACCCATAT...GTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAAAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp TACATCTATTACACCACTGTAAAACATGTGTTGATCCTGAAGACGAGCTCTTACTGCACCCCATATATTTaGGGTTACTCCTTGATAAAG +
Preference number: 4 (lower is better)
Translates to: YIYYTTVKHVLILKTSSYCTPYI*GYSLIK
Trigger: CTTTATCAAGGAGTAACCCCAAATATATGGGGTGCA...GTAAGAGCTCGTCTTCAGGATCAACACATGTTTTACAGTGGTGTAATAGATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp AGCAGTTCTCTGGCTTCTAATGACTATAGAGCAATTTCGAATATGAGCCATGTTGGTAATACAGCAGGCTaGAGTCACTCTAATCAAATT +
Preference number: 4 (lower is better)
Translates to: SSSLASNDYRAISNMSHVGNTAG*SHSNQI
Trigger: AATTTGATTAGAGTGACTCCAGCCTGCTGTATTACC...AACATGGCTCATATTCGAAATTGCTCTATAGTCATTAGAAGCCAGAGAACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp CTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTAAAATGGTCTGGATTTaGTCAACACCTTATTCAGTA +
Preference number: 4 (lower is better)
Translates to: LKHKRACCCLGQIYWNCPKMVWI*STPYSV
Trigger: TACTGAATAAGGTGTTGACCAAATCCAGACCATTTT...AGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CCA 90 bp GATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAATGTGCAACAGCACTCGTaGATGTTTACGATAAATAAA +
Preference number: 4 (lower is better)
Translates to: DSAATDIYSTVLNWASGNVQQHS*MFTINK
Trigger: TTTATTTATCGTAAACATCCACGAGTGCTGTTGCAC...ATTACCAGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CCA 90 bp CTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTTTCACTTTTTCCGTGTaGGGACTAATATCAAGATTT +
Preference number: 4 (lower is better)
Translates to: LKHKRACCCLGQIYWNCPFTFSV*GLISRF
Trigger: AAATCTTGATATTAGTCCCCACACGGAAAAAGTGAA...AGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CCA 90 bp CTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTGCGGTATTTAAACAATaGTGCTATCTTAAACACCAA +
Preference number: 4 (lower is better)
Translates to: LKHKRACCCLGQIYWNCPAVFKQ*CYLKHQ
Trigger: TTGGTGTTTAAGATAGCACCATTGTTTAAATACCGC...AGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
3UTR CAA 72 bp TGTGATTACATCTATTACACCACTGTAAAACATGTGTaGATCCTGAAGACGAGCTCTTACGACTTGATATGG +
Preference number: 4 (lower is better)
Translates to: CDYIYYTTVKHV*ILKTSSYDLIW
Trigger: CCATATCAAGTCGTAAGAGCTCGTCTTCAGGATCAACACATGTTTTACAGTGGTGTAATAGATGTAATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
3UTR CAA 72 bp TATTCTACTGTGCTCAACTGGGCTTCTGGTAATCTATaGATATGCTGGTTGTACTTCAACTTCAGCAATTCA +
Preference number: 4 (lower is better)
Translates to: YSTVLNWASGNL*ICWLYFNFSNS
Trigger: TGAATTGCTGAAGTTGAAGTACAACCAGCATATCAATAGATTACCAGAAGCCCAGTTGAGCACAGTAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523866.1
CDS-3UTR TCA 90 bp AGCAGTTCTCTGGCTTCTAATGACTATAGAGCAATTTCGAATATGAGCCATGTTCTTCTGGTAATCTATTaGTATGCTGGTTGTACTTCA +
Preference number: 4 (lower is better)
Translates to: SSSLASNDYRAISNMSHVLLVIY*YAGCTS
Trigger: TGAAGTACAACCAGCATATCAATAGATTACCAGAAG...AACATGGCTCATATTCGAAATTGCTCTATAGTCATTAGAAGCCAGAGAACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR TCA 90 bp GCAAATATTTTGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGTCCTCCATGTCTTTGTaGTTACATCTATTACACCAC +
Preference number: 4 (lower is better)
Translates to: ANILDSAATDIYSTVLNWSSMSL*LHLLHH
Trigger: GTGGTGTAATAGATGTAATCACAAAGACATGGAGGA...CCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCAAAATATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp TGTCTTTGTGATTACATCTATTACACCACTGTAAAACATGTGTTGATCCTGAAGCTTCAGCAATTCATATaGCATAAACTGAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: CLCDYIYYTTVKHVLILKLQQFI*HKLKGT
Trigger: GGTGCCCTTCAGTTTATGGCATATGAATTGCTGAAG...CTTCAGGATCAACACATGTTTTACAGTGGTGTAATAGATGTAATCACAAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp ATTTTGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTATATATATTCTACTGTaGTCAACTGGGCTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: ILDSAATDIYSTVLNWASIYILL*STGLLV
Trigger: TACCAGAAGCCCAGTTGAGCACAGTAGAATATATAT...AGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp GATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAATCTATTGATATGCTGGATATATATTCTACTGTaGTCAACTGGGCTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: DIYSTVLNWASGNLLICWIYILL*STGLLV
Trigger: TACCAGAAGCCCAGTTGAGCACAGTAGAATATATAT...CCAGCATATCAATAGATTACCAGAAGCCCAGTTGAGCACAGTAGAATATATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp AGCAGTTCTCTGGCTTCTAATGACTATAGAGCAATTTCGAATATGAGCCATGTTATATGGGTATGTTGCTaGGACAGCAAATATTTTGGA +
Preference number: 4 (lower is better)
Translates to: SSSLASNDYRAISNMSHVIWVCC*DSKYFG
Trigger: TCCAAAATATTTGCTGTCGCAGCAACATACCCATAT...AACATGGCTCATATTCGAAATTGCTCTATAGTCATTAGAAGCCAGAGAACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR GCA 90 bp TACATCTATTACACCACTGTAAAACATGTGTTGATCCTGAAGACGAGCTCTTACATATGGGTATGTTGCTaGGACAGCAAATATTTTGGA +
Preference number: 4 (lower is better)
Translates to: YIYYTTVKHVLILKTSSYIWVCC*DSKYFG
Trigger: TCCAAAATATTTGCTGTCGCAGCAACATACCCATAT...GTAAGAGCTCGTCTTCAGGATCAACACATGTTTTACAGTGGTGTAATAGATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp CTTCTTTTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACAAAATGGTCTGGATTTaGTCAACACCTTATTCAGTA +
Preference number: 4 (lower is better)
Translates to: LLLCLKHKRACCCLGQIYKMVWI*STPYSV
Trigger: TACTGAATAAGGTGTTGACCAAATCCAGACCATTTT...GTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAAAAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CCA 90 bp AGCAGTTCTCTGGCTTCTAATGACTATAGAGCAATTTCGAATATGAGCCATGTTGTGCAACAGCACTCGTaGATGTTTACGATAAATAAA +
Preference number: 4 (lower is better)
Translates to: SSSLASNDYRAISNMSHVVQQHS*MFTINK
Trigger: TTTATTTATCGTAAACATCCACGAGTGCTGTTGCAC...AACATGGCTCATATTCGAAATTGCTCTATAGTCATTAGAAGCCAGAGAACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR GCA 90 bp AGCAGTTCTCTGGCTTCTAATGACTATAGAGCAATTTCGAATATGAGCCATGTTTTGATATGGGTATGTTaGTGCGACAGCAAATATTTT +
Preference number: 4 (lower is better)
Translates to: SSSLASNDYRAISNMSHVLIWVC*CDSKYF
Trigger: AAAATATTTGCTGTCGCAGCAACATACCCATATCAA...AACATGGCTCATATTCGAAATTGCTCTATAGTCATTAGAAGCCAGAGAACTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CCA 90 bp TGTCTTTGTGATTACATCTATTACACCACTGTAAAACATGTGTTGATCCTGAAGAAAATACTAGTATTCTaGCATCCTTTGGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: CLCDYIYYTTVKHVLILKKILVF*HPLGTG
Trigger: GCCTGTACCCAAAGGATGCCAGAATACTAGTATTTT...CTTCAGGATCAACACATGTTTTACAGTGGTGTAATAGATGTAATCACAAAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CCA 90 bp GACGCCTTCTTTCCTCCATGTCTTTGTGATTACATCTATTACACCACTGTAAAATTCACTTTTTCCGTGTaGGGACTAATATCAAGATTT +
Preference number: 4 (lower is better)
Translates to: DAFFPPCLCDYIYYTTVKFTFSV*GLISRF
Trigger: AAATCTTGATATTAGTCCCCACACGGAAAAAGTGAA...TTTTACAGTGGTGTAATAGATGTAATCACAAAGACATGGAGGAAAGAAGGCGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CCA 90 bp AGCAGTTCTCTGGCTTCTAATGACTATAGAGCAATTTCGAATATGAGCCATGTTGCGGTATTTAAACAATaGTGCTATCTTAAACACCAA +
Preference number: 4 (lower is better)
Translates to: SSSLASNDYRAISNMSHVAVFKQ*CYLKHQ
Trigger: TTGGTGTTTAAGATAGCACCATTGTTTAAATACCGC...AACATGGCTCATATTCGAAATTGCTCTATAGTCATTAGAAGCCAGAGAACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR GCA 90 bp GTATTCTGGCATCCTTTGGGTACAGGCCCTTTTATATTTATAGATGTCTACAATGGTAATCTATTGATATaGTGGTTGTACTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: VFWHPLGTGPFIFIDVYNGNLLI*WLYFNF
Trigger: GAAGTTGAAGTACAACCAGCATATCAATAGATTACC...ATTGTAGACATCTATAAATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CCA 90 bp GCAAATATTTTGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGAAAATGGTCTGGATTTaGTCAACACCTTATTCAGTA +
Preference number: 4 (lower is better)
Translates to: ANILDSAATDIYSTVLNWKMVWI*STPYSV
Trigger: TACTGAATAAGGTGTTGACCAAATCCAGACCATTTT...CCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCAAAATATTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CCA 90 bp GTATTCTGGCATCCTTTGGGTACAGGCCCTTTTATATTTATAGATGTCTACAATTTCACTTTTTCCGTGTaGGGACTAATATCAAGATTT +
Preference number: 4 (lower is better)
Translates to: VFWHPLGTGPFIFIDVYNFTFSV*GLISRF
Trigger: AAATCTTGATATTAGTCCCCACACGGAAAAAGTGAA...ATTGTAGACATCTATAAATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CCA 90 bp GTATTCTGGCATCCTTTGGGTACAGGCCCTTTTATATTTATAGATGTCTACAATGCGGTATTTAAACAATaGTGCTATCTTAAACACCAA +
Preference number: 4 (lower is better)
Translates to: VFWHPLGTGPFIFIDVYNAVFKQ*CYLKHQ
Trigger: TTGGTGTTTAAGATAGCACCATTGTTTAAATACCGC...ATTGTAGACATCTATAAATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR GCA 90 bp CTGCAGTTCACTTTTTCCGTGTGGGGACTAATATCAAGATTTCATATGAATTATGGTAATCTATTGATATaGTGGTTGTACTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: LQFTFSVWGLISRFHMNYGNLLI*WLYFNF
Trigger: GAAGTTGAAGTACAACCAGCATATCAATAGATTACC...ATAATTCATATGAAATCTTGATATTAGTCCCCACACGGAAAAAGTGAACTGCAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS CCA 90 bp CGCCCAGGGCCGCGGAGGTGGGACGCGATGCAGTGGCCGCCACCGTaGCGACGGTCGCCCCTTGTGAGCGCAACCCCACCTCCGGGACCA +
Preference number: 5 (lower is better)
Translates to: RPGPRRWDAMQWPPP*RRSPLVSATPPPGP
Trigger: TGGTCCCGGAGGTGGGGTTGCGCTCACAAGGGGCGACCGTCGCCACGGTGGCGGCCACTGCATCGCGTCCCACCTCCGCGGCCCTGGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS CCA 90 bp CGGAATACCGTGCTCCACGCCGACGACCCGGACGCCGACTGGCCCTaGCCCGTCATAGGCTCGGGGCCCGTCGACACCACGGCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: RNTVLHADDPDADWP*PVIGSGPVDTTAPR
Trigger: CCTGGGCGCCGTGGTGTCGACGGGCCCCGAGCCTATGACGGGCCAGGGCCAGTCGGCGTCCGGGTCGTCGGCGTGGAGCACGGTATTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS CCA 90 bp ACGTGGCGGAATACCGTGCTCCACGCCGACGACCCGGACGCCGACTaGCCCTGGCCCGTCATAGGCTCGGGGCCCGTCGACACCACGGCG +
Preference number: 5 (lower is better)
Translates to: TWRNTVLHADDPDAD*PWPVIGSGPVDTTA
Trigger: CGCCGTGGTGTCGACGGGCCCCGAGCCTATGACGGGCCAGGGCCAGTCGGCGTCCGGGTCGTCGGCGTGGAGCACGGTATTCCGCCACGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS TCA 90 bp GGGACGCGATGCAGTGGCCGCCACCGTGGCGACGGTCGCCCCTTGTaGGCGCAACCCCACCTCCGGGACCAACGAGAGGACTCTTATGCC +
Preference number: 5 (lower is better)
Translates to: GTRCSGRHRGDGRPL*AQPHLRDQREDSYA
Trigger: GGCATAAGAGTCCTCTCGTTGGTCCCGGAGGTGGGGTTGCGCTCACAAGGGGCGACCGTCGCCACGGTGGCGGCCACTGCATCGCGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS GCA 90 bp TCACGCCCGCTATCAGGTTCTCATACCGGACGTGGCGGAATACCGTaGTCCACGCCGACGACCCGGACGCCGACTGGCCCTGGCCCGTCA +
Preference number: 5 (lower is better)
Translates to: SRPLSGSHTGRGGIP*STPTTRTPTGPGPS
Trigger: TGACGGGCCAGGGCCAGTCGGCGTCCGGGTCGTCGGCGTGGAGCACGGTATTCCGCCACGTCCGGTATGAGAACCTGATAGCGGGCGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS CCA 90 bp AAGACGCCGCCGCTCACGCCCGCTATCAGGTTCTCATACCGGACGTaGCGGAATACCGTGCTCCACGCCGACGACCCGGACGCCGACTGG +
Preference number: 5 (lower is better)
Translates to: KTPPLTPAIRFSYRT*RNTVLHADDPDADW
Trigger: CCAGTCGGCGTCCGGGTCGTCGGCGTGGAGCACGGTATTCCGCCACGTCCGGTATGAGAACCTGATAGCGGGCGTGAGCGGCGGCGTCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS GCA 90 bp CTTGTGAGCGCAACCCCACCTCCGGGACCAACGAGAGGACTCTTATaGCCAAGGCGCGTGAGCGAAGCCGGAGACTCTAGTACTGAGGGG +
Preference number: 5 (lower is better)
Translates to: LVSATPPPGPTRGLL*PRRVSEAGDSSTEG
Trigger: CCCCTCAGTACTAGAGTCTCCGGCTTCGCTCACGCGCCTTGGGCATAAGAGTCCTCTCGTTGGTCCCGGAGGTGGGGTTGCGCTCACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
CDS CCA 90 bp CGGCGAAGCGGATCTTCACGAGGTCGAGCGGATGCAGCGCAAGGTTaGATAAGACGCCGCCGCTCACGCCCGCTATCAGGTTCTCATACC +
Preference number: 5 (lower is better)
Translates to: RRSGSSRGRADAAQG*IRRRRSRPLSGSHT
Trigger: GGTATGAGAACCTGATAGCGGGCGTGAGCGGCGGCGTCTTATCCAACCTTGCGCTGCATCCGCTCGACCTCGTGAAGATCCGCTTCGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS GCA 90 bp AATCCATCACTCACGGCGAAGCGGATCTTCACGAGGTCGAGCGGATaGAGCGCAAGGTTGGATAAGACGCCGCCGCTCACGCCCGCTATC +
Preference number: 5 (lower is better)
Translates to: NPSLTAKRIFTRSSG*SARLDKTPPLTPAI
Trigger: GATAGCGGGCGTGAGCGGCGGCGTCTTATCCAACCTTGCGCTGCATCCGCTCGACCTCGTGAAGATCCGCTTCGCCGTGAGTGATGGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp CAGCAATTCATATGCCATAAACTGAAGGGCACCATGCGATGTTCCAAACAGCCCGGATGCAGCGCAAGGTaGGATAAGACGCCGCCGCTC +
Preference number: 5 (lower is better)
Translates to: QQFICHKLKGTMRCSKQPGCSAR*DKTPPL
Trigger: GAGCGGCGGCGTCTTATCCAACCTTGCGCTGCATCC...GGGCTGTTTGGAACATCGCATGGTGCCCTTCAGTTTATGGCATATGAATTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523866.1
CDS-3UTR CAA 90 bp GATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAATCTATTGATATGCTGGGGATGCAGCGCAAGGTaGGATAAGACGCCGCCGCTC +
Preference number: 5 (lower is better)
Translates to: DIYSTVLNWASGNLLICWGCSAR*DKTPPL
Trigger: GAGCGGCGGCGTCTTATCCAACCTTGCGCTGCATCC...CCAGCATATCAATAGATTACCAGAAGCCCAGTTGAGCACAGTAGAATATATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp GTATTCTGGCATCCTTTGGGTACAGGCCCTTTTATATTTATAGATGTCTACAATGGATGCAGCGCAAGGTaGGATAAGACGCCGCCGCTC +
Preference number: 5 (lower is better)
Translates to: VFWHPLGTGPFIFIDVYNGCSAR*DKTPPL
Trigger: GAGCGGCGGCGTCTTATCCAACCTTGCGCTGCATCC...ATTGTAGACATCTATAAATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CAA 90 bp GCAGCCATTTCAGGCAGAGGTAGCCAAGTTCCATATATATGGGGAAGGCAAAAAACGAGCTCTTACGACTaGATATGGGTATGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: AAISGRGSQVPYIWGRQKTSSYD*IWVCCC
Trigger: GCAGCAACATACCCATATCAAGTCGTAAGAGCTCGT...TTTTTGCCTTCCCCATATATATGGAACTTGGCTACCTCTGCCTGAAATGGCTGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp CAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCGAGCTTGTTGCTGCCTaGGGCAGATATACTGGAATT +
Preference number: 5 (lower is better)
Translates to: QKSLLLPWADILELSSLSELVAA*GRYTGI
Trigger: AATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTC...GCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp GCAGCCATTTCAGGCAGAGGTAGCCAAGTTCCATATATATGGGGAAGGCAAAAAAGACAAGGTATTCTGTaGCCTCTAAACGTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: AAISGRGSQVPYIWGRQKRQGIL*PLNVQL
Trigger: GAGCTGAACGTTTAGAGGCAACAGAATACCTTGTCT...TTTTTGCCTTCCCCATATATATGGAACTTGGCTACCTCTGCCTGAAATGGCTGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297578.9
ENST00000521645.5
CDS-3UTR CAA 90 bp ACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGACGAGCTCTTACGACTaGATATGGGTATGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: TKELVAALGRYTGIVLFETSSYD*IWVCCC
Trigger: GCAGCAACATACCCATATCAAGTCGTAAGAGCTCGT...CTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp CAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCACACAAAAGAGCTTGTaGCTGCCTTGGGCAGATATA +
Preference number: 5 (lower is better)
Translates to: QKSLLLPWADILELSSLSTQKSL*LPWADI
Trigger: TATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGT...GCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp GATCCTGAAGACGAGCTCTTACGACTTGATATGGGTATGTTGCTGCGACAGCAACTTGATATGGGTATGTaGCTGCGACAGCAAATATTT +
Preference number: 5 (lower is better)
Translates to: DPEDELLRLDMGMLLRQQLDMGM*LRQQIF
Trigger: AAATATTTGCTGTCGCAGCAACATACCCATATCAAG...TTGCTGTCGCAGCAACATACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp CACTGTAAAACATGTGTTGATCCTGAAGACGAGCTCTTACGACTTGATATGGGTACGAGCTCTTACGACTaGATATGGGTATGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: HCKTCVDPEDELLRLDMGTSSYD*IWVCCC
Trigger: GCAGCAACATACCCATATCAAGTCGTAAGAGCTCGT...ACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATCAACACATGTTTTACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp GCAGCCATTTCAGGCAGAGGTAGCCAAGTTCCATATATATGGGGAAGGCAAAAAACTGTAAAACATGTGTaGATCCTGAAGACGAGCTCT +
Preference number: 5 (lower is better)
Translates to: AAISGRGSQVPYIWGRQKTVKHV*ILKTSS
Trigger: AGAGCTCGTCTTCAGGATCAACACATGTTTTACAGT...TTTTTGCCTTCCCCATATATATGGAACTTGGCTACCTCTGCCTGAAATGGCTGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp TGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAGAGCTTGTTGCTGCCTaGGGCAGATATACTGGAATT +
Preference number: 5 (lower is better)
Translates to: WIVLQQIYILLCSTGLLVELVAA*GRYTGI
Trigger: AATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTC...TACCAGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp ACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCTGCACCCCATATATTaGGGGTTACTCCTTGATAAA +
Preference number: 5 (lower is better)
Translates to: TKELVAALGRYTGIVLFELHPIY*GLLLDK
Trigger: TTTATCAAGGAGTAACCCCAAATATATGGGGTGCAG...CTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp GCAGCCATTTCAGGCAGAGGTAGCCAAGTTCCATATATATGGGGAAGGCAAAAAAAACATTCCTTTATATaGTCGGTGTGGGGAGTTAAC +
Preference number: 5 (lower is better)
Translates to: AAISGRGSQVPYIWGRQKKHSFI*SVWGVN
Trigger: GTTAACTCCCCACACCGACAATATAAAGGAATGTTT...TTTTTGCCTTCCCCATATATATGGAACTTGGCTACCTCTGCCTGAAATGGCTGC
43% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000297578.9
ENST00000523866.1
CDS-3UTR CAA 90 bp GCAGCCATTTCAGGCAGAGGTAGCCAAGTTCCATATATATGGGGAAGGCAAAAACTTGATATGGGTATGTaGCTGCGACAGCAAATATTT +
Preference number: 5 (lower is better)
Translates to: AAISGRGSQVPYIWGRQKLDMGM*LRQQIF
Trigger: AAATATTTGCTGTCGCAGCAACATACCCATATCAAG...TTTTTGCCTTCCCCATATATATGGAACTTGGCTACCTCTGCCTGAAATGGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp ATTAGGAGCAATTCCCTTGTAAAATCCACCGACGCCTTCTTTCCTCCATGTCTTACTGTAAAACATGTGTaGATCCTGAAGACGAGCTCT +
Preference number: 5 (lower is better)
Translates to: IRSNSLVKSTDAFFPPCLTVKHV*ILKTSS
Trigger: AGAGCTCGTCTTCAGGATCAACACATGTTTTACAGT...AAGACATGGAGGAAAGAAGGCGTCGGTGGATTTTACAAGGGAATTGCTCCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp TATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGAGCTTGTTGCTGCCTaGGGCAGATATACTGGAATT +
Preference number: 5 (lower is better)
Translates to: YALNTKELVAALGRYTGIELVAA*GRYTGI
Trigger: AATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTC...AATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp TGTGAGACGTTTTCATATACCACAAAGGTAATACAGCAGGCTGGAGTCACTCTAACACAAAAGAGCTTGTaGCTGCCTTGGGCAGATATA +
Preference number: 5 (lower is better)
Translates to: CETFSYTTKVIQQAGVTLTQKSL*LPWADI
Trigger: TATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGT...TAGAGTGACTCCAGCCTGCTGTATTACCTTTGTGGTATATGAAAACGTCTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp ACGAGCTCTTACGACTTGATATGGGTATGTTGCTGCGACAGCAAATATTTTGGAACACAAAAGAGCTTGTaGCTGCCTTGGGCAGATATA +
Preference number: 5 (lower is better)
Translates to: TSSYDLIWVCCCDSKYFGTQKSL*LPWADI
Trigger: TATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGT...TCCAAAATATTTGCTGTCGCAGCAACATACCCATATCAAGTCGTAAGAGCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp ACGAGCTCTTACGACTTGATATGGGTATGTTGCTGCGACAGCAAATATTTTGGAGTATTCTGGCATCCTTaGGGTACAGGCCCTTTTATA +
Preference number: 5 (lower is better)
Translates to: TSSYDLIWVCCCDSKYFGVFWHP*GTGPFI
Trigger: TATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC...TCCAAAATATTTGCTGTCGCAGCAACATACCCATATCAAGTCGTAAGAGCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CAA 90 bp CACTGTAAAACATGTGTTGATCCTGAAGACGAGCTCTTACGACTTGATATGGGTGTATTCTGGCATCCTTaGGGTACAGGCCCTTTTATA +
Preference number: 5 (lower is better)
Translates to: HCKTCVDPEDELLRLDMGVFWHP*GTGPFI
Trigger: TATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC...ACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATCAACACATGTTTTACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CAA 90 bp CAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGCCTATTGATATGCTGGTaGTACTTCAACTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: QKSLLLPWADILELSSLSLLICW*YFNFSN
Trigger: ATTGCTGAAGTTGAAGTACAACCAGCATATCAATAG...GCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp ACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTCCTCTTTGAGGCTTCTGGTAATCTATaGATATGCTGGTTGTACTTC +
Preference number: 5 (lower is better)
Translates to: TKELVAALGRYTGIVLFEASGNL*ICWLYF
Trigger: GAAGTACAACCAGCATATCAATAGATTACCAGAAGC...CTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp TGGAGTCACTCTAATCAAATTAGGAGCAATTCCCTTGTAAAATCCACCGACGCCGCAGATATACTGGAATaGTCCTCTTTGAGCTTACTT +
Preference number: 5 (lower is better)
Translates to: WSHSNQIRSNSLVKSTDAADILE*SSLSLL
Trigger: AAGTAAGCTCAAAGAGGACAATTCCAGTATATCTGC...GGCGTCGGTGGATTTTACAAGGGAATTGCTCCTAATTTGATTAGAGTGACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp TTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATACACAAAAGAGCTTGTaGCTGCCTTGGGCAGATATA +
Preference number: 5 (lower is better)
Translates to: LCLKHKRACCCLGQIYWNTQKSL*LPWADI
Trigger: TATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGT...ATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp AAATCCACCGACGCCTTCTTTCCTCCATGTCTTTGTGATTACATCTATTACACCAGTTTTAACATTGTGTaGATGGCAGCCATTTCAGGC +
Preference number: 5 (lower is better)
Translates to: KSTDAFFPPCLCDYIYYTSFNIV*MAAISG
Trigger: GCCTGAAATGGCTGCCATCAACACAATGTTAAAACT...GGTGTAATAGATGTAATCACAAAGACATGGAGGAAAGAAGGCGTCGGTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp TATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACTGGAATTGTATTCTGGCATCCTTaGGGTACAGGCCCTTTTATA +
Preference number: 5 (lower is better)
Translates to: YALNTKELVAALGRYTGIVFWHP*GTGPFI
Trigger: TATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC...AATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CAA 90 bp GCAGGCTGGAGTCACTCTAATCAAATTAGGAGCAATTCCCTTGTAAAATCCACCCTATTGATATGCTGGTaGTACTTCAACTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: AGWSHSNQIRSNSLVKSTLLICW*YFNFSN
Trigger: ATTGCTGAAGTTGAAGTACAACCAGCATATCAATAG...GGTGGATTTTACAAGGGAATTGCTCCTAATTTGATTAGAGTGACTCCAGCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp TGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAGCTTCTGGTAATCTATaGATATGCTGGTTGTACTTC +
Preference number: 5 (lower is better)
Translates to: WIVLQQIYILLCSTGLLVASGNL*ICWLYF
Trigger: GAAGTACAACCAGCATATCAATAGATTACCAGAAGC...TACCAGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp CACTGTAAAACATGTGTTGATCCTGAAGACGAGCTCTTACGACTTGATATGGGTGCTTCTGGTAATCTATaGATATGCTGGTTGTACTTC +
Preference number: 5 (lower is better)
Translates to: HCKTCVDPEDELLRLDMGASGNL*ICWLYF
Trigger: GAAGTACAACCAGCATATCAATAGATTACCAGAAGC...ACCCATATCAAGTCGTAAGAGCTCGTCTTCAGGATCAACACATGTTTTACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp TGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTGGTACTTGATATGGGTATGTaGCTGCGACAGCAAATATTT +
Preference number: 5 (lower is better)
Translates to: WIVLQQIYILLCSTGLLVLDMGM*LRQQIF
Trigger: AAATATTTGCTGTCGCAGCAACATACCCATATCAAG...TACCAGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp TGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAGCAGATATACTGGAATaGTCCTCTTTGAGCTTACTT +
Preference number: 5 (lower is better)
Translates to: WIVLQQIYILLCSTGLLVADILE*SSLSLL
Trigger: AAGTAAGCTCAAAGAGGACAATTCCAGTATATCTGC...TACCAGAAGCCCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp GCAAATATTTTGGATAGTGCTGCAACAGATATATATTCTACTGTGCTCAACTGGGAGCTTGTTGCTGCCTaGGGCAGATATACTGGAATT +
Preference number: 5 (lower is better)
Translates to: ANILDSAATDIYSTVLNWELVAA*GRYTGI
Trigger: AATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTC...CCAGTTGAGCACAGTAGAATATATATCTGTTGCAGCACTATCCAAAATATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp GTTTTCATATACCACAAAGGTAATACAGCAGGCTGGAGTCACTCTAATCAAATTAGACAAGGTATTCTGTaGCCTCTAAACGTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: VFIYHKGNTAGWSHSNQIRQGIL*PLNVQL
Trigger: GAGCTGAACGTTTAGAGGCAACAGAATACCTTGTCT...AATTTGATTAGAGTGACTCCAGCCTGCTGTATTACCTTTGTGGTATATGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521645.5
CDS-3UTR CAA 90 bp CTGCAGTTCACTTTTTCCGTGTGGGGACTAATATCAAGATTTCATATGAATTATACGAGCTCTTACGACTaGATATGGGTATGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: LQFTFSVWGLISRFHMNYTSSYD*IWVCCC
Trigger: GCAGCAACATACCCATATCAAGTCGTAAGAGCTCGT...ATAATTCATATGAAATCTTGATATTAGTCCCCACACGGAAAAAGTGAACTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CAA 90 bp GATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAATCTATTGATATGCTGGACTGTAAAACATGTGTaGATCCTGAAGACGAGCTCT +
Preference number: 5 (lower is better)
Translates to: DIYSTVLNWASGNLLICWTVKHV*ILKTSS
Trigger: AGAGCTCGTCTTCAGGATCAACACATGTTTTACAGT...CCAGCATATCAATAGATTACCAGAAGCCCAGTTGAGCACAGTAGAATATATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp CTTCTTTTATGCCTTAAACACAAAAGAGCTTGTTGCTGCCTTGGGCAGATATACGCAGATATACTGGAATaGTCCTCTTTGAGCTTACTT +
Preference number: 5 (lower is better)
Translates to: LLLCLKHKRACCCLGQIYADILE*SSLSLL
Trigger: AAGTAAGCTCAAAGAGGACAATTCCAGTATATCTGC...GTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAAAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp AGCAGTTCTCTGGCTTCTAATGACTATAGAGCAATTTCGAATATGAGCCATGTTAGTTTTAACATTGTGTaGATGGCAGCCATTTCAGGC +
Preference number: 5 (lower is better)
Translates to: SSSLASNDYRAISNMSHVSFNIV*MAAISG
Trigger: GCCTGAAATGGCTGCCATCAACACAATGTTAAAACT...AACATGGCTCATATTCGAAATTGCTCTATAGTCATTAGAAGCCAGAGAACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp GATATATATTCTACTGTGCTCAACTGGGCTTCTGGTAATCTATTGATATGCTGGAGTTTTAACATTGTGTaGATGGCAGCCATTTCAGGC +
Preference number: 5 (lower is better)
Translates to: DIYSTVLNWASGNLLICWSFNIV*MAAISG
Trigger: GCCTGAAATGGCTGCCATCAACACAATGTTAAAACT...CCAGCATATCAATAGATTACCAGAAGCCCAGTTGAGCACAGTAGAATATATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp GTATTCTGGCATCCTTTGGGTACAGGCCCTTTTATATTTATAGATGTCTACAATCTGCACCCCATATATTaGGGGTTACTCCTTGATAAA +
Preference number: 5 (lower is better)
Translates to: VFWHPLGTGPFIFIDVYNLHPIY*GLLLDK
Trigger: TTTATCAAGGAGTAACCCCAAATATATGGGGTGCAG...ATTGTAGACATCTATAAATATAAAAGGGCCTGTACCCAAAGGATGCCAGAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS-3UTR CAA 90 bp GACGCCTTCTTTCCTCCATGTCTTTGTGATTACATCTATTACACCACTGTAAAAAAACATTCCTTTATATaGTCGGTGTGGGGAGTTAAC +
Preference number: 5 (lower is better)
Translates to: DAFFPPCLCDYIYYTTVKKHSFI*SVWGVN
Trigger: GTTAACTCCCCACACCGACAATATAAAGGAATGTTT...TTTTACAGTGGTGTAATAGATGTAATCACAAAGACATGGAGGAAAGAAGGCGTC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000523866.1
CDS-3UTR CAA 90 bp AGCAGTTCTCTGGCTTCTAATGACTATAGAGCAATTTCGAATATGAGCCATGTTCTTGATATGGGTATGTaGCTGCGACAGCAAATATTT +
Preference number: 5 (lower is better)
Translates to: SSSLASNDYRAISNMSHVLDMGM*LRQQIF
Trigger: AAATATTTGCTGTCGCAGCAACATACCCATATCAAG...AACATGGCTCATATTCGAAATTGCTCTATAGTCATTAGAAGCCAGAGAACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp GACGCCTTCTTTCCTCCATGTCTTTGTGATTACATCTATTACACCACTGTAAAAGCAGATATACTGGAATaGTCCTCTTTGAGCTTACTT +
Preference number: 5 (lower is better)
Translates to: DAFFPPCLCDYIYYTTVKADILE*SSLSLL
Trigger: AAGTAAGCTCAAAGAGGACAATTCCAGTATATCTGC...TTTTACAGTGGTGTAATAGATGTAATCACAAAGACATGGAGGAAAGAAGGCGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp AGCAGTTCTCTGGCTTCTAATGACTATAGAGCAATTTCGAATATGAGCCATGTTCTATTGATATGCTGGTaGTACTTCAACTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: SSSLASNDYRAISNMSHVLLICW*YFNFSN
Trigger: ATTGCTGAAGTTGAAGTACAACCAGCATATCAATAG...AACATGGCTCATATTCGAAATTGCTCTATAGTCATTAGAAGCCAGAGAACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS-3UTR CAA 90 bp TGTCTTTGTGATTACATCTATTACACCACTGTAAAACATGTGTTGATCCTGAAGCTATTGATATGCTGGTaGTACTTCAACTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: CLCDYIYYTTVKHVLILKLLICW*YFNFSN
Trigger: ATTGCTGAAGTTGAAGTACAACCAGCATATCAATAG...CTTCAGGATCAACACATGTTTTACAGTGGTGTAATAGATGTAATCACAAAGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS CCA 72 bp GGCCCGTCGACACCACGGCGCCCAGGGCCGCGGAGGTaGGACGCGATGCAGTGGCCGCCACCGTGGCGACGG +
Preference number: 6 (lower is better)
Translates to: GPSTPRRPGPRR*DAMQWPPPWRR
Trigger: CCGTCGCCACGGTGGCGGCCACTGCATCGCGTCCCACCTCCGCGGCCCTGGGCGCCGTGGTGTCGACGGGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS GCA 72 bp CACCACGGCGCCCAGGGCCGCGGAGGTGGGACGCGATaGAGTGGCCGCCACCGTGGCGACGGTCGCCCCTTG +
Preference number: 6 (lower is better)
Translates to: HHGAQGRGGGTR*SGRHRGDGRPL
Trigger: CAAGGGGCGACCGTCGCCACGGTGGCGGCCACTGCATCGCGTCCCACCTCCGCGGCCCTGGGCGCCGTGGTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS CCA 72 bp CGGCGCCCAGGGCCGCGGAGGTGGGACGCGATGCAGTaGCCGCCACCGTGGCGACGGTCGCCCCTTGTGAGC +
Preference number: 6 (lower is better)
Translates to: RRPGPRRWDAMQ*PPPWRRSPLVS
Trigger: GCTCACAAGGGGCGACCGTCGCCACGGTGGCGGCCACTGCATCGCGTCCCACCTCCGCGGCCCTGGGCGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS CCA 72 bp GTGCTCCACGCCGACGACCCGGACGCCGACTGGCCCTaGCCCGTCATAGGCTCGGGGCCCGTCGACACCACG +
Preference number: 6 (lower is better)
Translates to: VLHADDPDADWP*PVIGSGPVDTT
Trigger: CGTGGTGTCGACGGGCCCCGAGCCTATGACGGGCCAGGGCCAGTCGGCGTCCGGGTCGTCGGCGTGGAGCAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS CCA 72 bp CCGCGGAGGTGGGACGCGATGCAGTGGCCGCCACCGTaGCGACGGTCGCCCCTTGTGAGCGCAACCCCACCT +
Preference number: 6 (lower is better)
Translates to: PRRWDAMQWPPP*RRSPLVSATPP
Trigger: AGGTGGGGTTGCGCTCACAAGGGGCGACCGTCGCCACGGTGGCGGCCACTGCATCGCGTCCCACCTCCGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS CCA 72 bp AATACCGTGCTCCACGCCGACGACCCGGACGCCGACTaGCCCTGGCCCGTCATAGGCTCGGGGCCCGTCGAC +
Preference number: 6 (lower is better)
Translates to: NTVLHADDPDAD*PWPVIGSGPVD
Trigger: GTCGACGGGCCCCGAGCCTATGACGGGCCAGGGCCAGTCGGCGTCCGGGTCGTCGGCGTGGAGCACGGTATT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS TCA 72 bp TGCAGTGGCCGCCACCGTGGCGACGGTCGCCCCTTGTaGGCGCAACCCCACCTCCGGGACCAACGAGAGGAC +
Preference number: 6 (lower is better)
Translates to: CSGRHRGDGRPL*AQPHLRDQRED
Trigger: GTCCTCTCGTTGGTCCCGGAGGTGGGGTTGCGCTCACAAGGGGCGACCGTCGCCACGGTGGCGGCCACTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS CCA 72 bp CCGCTCACGCCCGCTATCAGGTTCTCATACCGGACGTaGCGGAATACCGTGCTCCACGCCGACGACCCGGAC +
Preference number: 6 (lower is better)
Translates to: PLTPAIRFSYRT*RNTVLHADDPD
Trigger: GTCCGGGTCGTCGGCGTGGAGCACGGTATTCCGCCACGTCCGGTATGAGAACCTGATAGCGGGCGTGAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS GCA 72 bp CTATCAGGTTCTCATACCGGACGTGGCGGAATACCGTaGTCCACGCCGACGACCCGGACGCCGACTGGCCCT +
Preference number: 6 (lower is better)
Translates to: LSGSHTGRGGIP*STPTTRTPTGP
Trigger: AGGGCCAGTCGGCGTCCGGGTCGTCGGCGTGGAGCACGGTATTCCGCCACGTCCGGTATGAGAACCTGATAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS GCA 72 bp CTCACGGCGAAGCGGATCTTCACGAGGTCGAGCGGATaGAGCGCAAGGTTGGATAAGACGCCGCCGCTCACG +
Preference number: 6 (lower is better)
Translates to: LTAKRIFTRSSG*SARLDKTPPLT
Trigger: CGTGAGCGGCGGCGTCTTATCCAACCTTGCGCTGCATCCGCTCGACCTCGTGAAGATCCGCTTCGCCGTGAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS CAA 72 bp CGGATCTTCACGAGGTCGAGCGGATGCAGCGCAAGGTaGGATAAGACGCCGCCGCTCACGCCCGCTATCAGG +
Preference number: 6 (lower is better)
Translates to: RIFTRSSGCSAR*DKTPPLTPAIR
Trigger: CCTGATAGCGGGCGTGAGCGGCGGCGTCTTATCCAACCTTGCGCTGCATCCGCTCGACCTCGTGAAGATCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS GCA 72 bp GCAACCCCACCTCCGGGACCAACGAGAGGACTCTTATaGCCAAGGCGCGTGAGCGAAGCCGGAGACTCTAGT +
Preference number: 6 (lower is better)
Translates to: ATPPPGPTRGLL*PRRVSEAGDSS
Trigger: ACTAGAGTCTCCGGCTTCGCTCACGCGCCTTGGGCATAAGAGTCCTCTCGTTGGTCCCGGAGGTGGGGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
CDS CCA 72 bp GGATCTTCACGAGGTCGAGCGGATGCAGCGCAAGGTTaGATAAGACGCCGCCGCTCACGCCCGCTATCAGGT +
Preference number: 6 (lower is better)
Translates to: GSSRGRADAAQG*IRRRRSRPLSG
Trigger: ACCTGATAGCGGGCGTGAGCGGCGGCGTCTTATCCAACCTTGCGCTGCATCCGCTCGACCTCGTGAAGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS CAA 90 bp ACGGCGAAGCGGATCTTCACGAGGTCGAGCGGATGCAGCGCAAGGTaGGATAAGACGCCGCCGCTCACGCCCGCTATCAGGTTCTCATAC +
Preference number: 6 (lower is better)
Translates to: TAKRIFTRSSGCSAR*DKTPPLTPAIRFSY
Trigger: GTATGAGAACCTGATAGCGGGCGTGAGCGGCGGCGTCTTATCCAACCTTGCGCTGCATCCGCTCGACCTCGTGAAGATCCGCTTCGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297578.9
ENST00000521645.5
ENST00000523256.6
ENST00000523866.1
CDS TCA 72 bp CGGGACCAACGAGAGGACTCTTATGCCCAAGGCGCGTaGGCGAAGCCGGAGACTCTAGTACTGAGGGGGCAA +
Preference number: 6 (lower is better)
Translates to: RDQREDSYAQGA*AKPETLVLRGQ
Trigger: TTGCCCCCTCAGTACTAGAGTCTCCGGCTTCGCTCACGCGCCTTGGGCATAAGAGTCCTCTCGTTGGTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521645.5
ENST00000523256.6
CDS CAA 72 bp TGGCTCCAGCTTCAGCAGCTGAGACAAGGTATTCTGTaGCCTCTAAACGTTCAGCTCTTCCTTCTGTTTTAT +
Preference number: 6 (lower is better)
Translates to: WLQLQQLRQGIL*PLNVQLFLLFY
Trigger: ATAAAACAGAAGGAAGAGCTGAACGTTTAGAGGCAACAGAATACCTTGTCTCAGCTGCTGAAGCTGGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297578.9
CDS CAA 72 bp AAATCCCAGCTTCAGCAGCTGAGACAAGGTATTCTGTaGCCTCTAAACGTTCAGCTCTTCCTTCTGTTTTAT +
Preference number: 6 (lower is better)
Translates to: KSQLQQLRQGIL*PLNVQLFLLFY
Trigger: ATAAAACAGAAGGAAGAGCTGAACGTTTAGAGGCAACAGAATACCTTGTCTCAGCTGCTGAAGCTGGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521645.5
CDS CAA 72 bp CAGTATACATATAAAGAAGACCCACACTGTCAAGACTaGAGGTGTGAGTGGGAAACTAAATTCTGGAAAGTT +
Preference number: 6 (lower is better)
Translates to: QYTYKEDPHCQD*RCEWETKFWKV
Trigger: AACTTTCCAGAATTTAGTTTCCCACTCACACCTCAAGTCTTGACAGTGTGGGTCTTCTTTATATGTATACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523701.1
CDS TCA 72 bp AGTATACATATAAAGAAGACCCACACTGTCAAGACTTaGGGTGTGAGTGGGAAACTAAATTCTGGAAAGTTA +
Preference number: 6 (lower is better)
Translates to: SIHIKKTHTVKT*GVSGKLNSGKL
Trigger: TAACTTTCCAGAATTTAGTTTCCCACTCACACCTCAAGTCTTGACAGTGTGGGTCTTCTTTATATGTATACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523701.1