RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC25A30 (Homo sapiens)

Ensembl gene IDs: ENSG00000174032

Ensembl transcript IDs: ENST00000310862.11, ENST00000463262.1, ENST00000519547.5, ENST00000519676.6, ENST00000523988.5, ENST00000539591.5, ENST00000618165.1

Found 304 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCTGCAGTCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTaGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCC +
Preference number: 1 (lower is better)
Translates to: TCSPSIQSQQRDWPD*EFGRTTVEGECPGA
Trigger: GGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGACTGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR GCA 90 bp GACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATaGCCTGGAGCCCCAGCTAACATGTATTTAATGTTGTTCTCAAAG +
Preference number: 1 (lower is better)
Translates to: DWPDWEFGRTTVEGE*PGAPANMYLMLFSK
Trigger: CTTTGAGAACAACATTAAATACATGTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR GCA 90 bp CAATGCCAACACACAGCAATCTCAACTAACCCAGTCTTCATCTGTTaGTCACATCCCAGAATCTGTGATGAGCCAAGCAGTGAGAAGCAG +
Preference number: 1 (lower is better)
Translates to: QCQHTAISTNPVFIC*SHPRICDEPSSEKQ
Trigger: CTGCTTCTCACTGCTTGGCTCATCACAGATTCTGGGATGTGAGCAACAGATGAAGACTGGGTTAGTTGAGATTGCTGTGTGTTGGCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR GCA 90 bp ATGTCTGTAACAAGCAATCCAGGGTTCCTGTGTAGCCAGAACATCTaGCATCTCGAAGCACTCTCTGATTCATCATACGTGTCCTCACAA +
Preference number: 1 (lower is better)
Translates to: MSVTSNPGFLCSQNI*HLEALSDSSYVSSQ
Trigger: TTGTGAGGACACGTATGATGAATCAGAGAGTGCTTCGAGATGGCAGATGTTCTGGCTACACAGGAACCCTGGATTGCTTGTTACAGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
3UTR TCA 90 bp GTGATATTCCTAGGATCCATTTCCTGCACCGTTTATACCTGGGGTTaGACAGTCCAGGTCTCCATACATGAAATTTCTTCAGTTGACAAG +
Preference number: 1 (lower is better)
Translates to: VIFLGSISCTVYTWG*TVQVSIHEISSVDK
Trigger: CTTGTCAACTGAAGAAATTTCATGTATGGAGACCTGGACTGTTCAACCCCAGGTATAAACGGTGCAGGAAATGGATCCTAGGAATATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR GCA 90 bp TGGATGTTAGTTTATGCCATTAAACGTTTGATGAAGAGCATCCAATaGCAACACACAGCAATCTCAACTAACCCAGTCTTCATCTGTTGC +
Preference number: 1 (lower is better)
Translates to: WMLVYAIKRLMKSIQ*QHTAISTNPVFICC
Trigger: GCAACAGATGAAGACTGGGTTAGTTGAGATTGCTGTGTGTTGGCATTGGATGCTCTTCATCAAACGTTTAATGGCATAAACTAACATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR CCA 90 bp AAATTAGATTTAATTCCAATTACGGTCTGTTGCTTCCGTGCCATGTaGGCTCCTGAACAGGTCACAAATAAAGAAGCAATAGTGGTAGAG +
Preference number: 1 (lower is better)
Translates to: KLDLIPITVCCFRAM*APEQVTNKEAIVVE
Trigger: CTCTACCACTATTGCTTCTTTATTTGTGACCTGTTCAGGAGCCCACATGGCACGGAAGCAACAGACCGTAATTGGAATTAAATCTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618165.1
3UTR TCA 90 bp TTTCTTCAACAAGACCTTAACAAAGGGCTTCATTCACAATTACCATaGGAAGCCCATGAGAACATGCCCCTCTTCTACATAGACTGTTTA +
Preference number: 1 (lower is better)
Translates to: FLQQDLNKGLHSQLP*EAHENMPLFYIDCL
Trigger: TAAACAGTCTATGTAGAAGAGGGGCATGTTCTCATGGGCTTCTCATGGTAATTGTGAATGAAGCCCTTTGTTAAGGTCTTGTTGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR TCA 90 bp TTACCTTTCCAGTCAAGTAGCAGCAGCTACTATTTGTTCTTCATTTaGCCCTCTACATCAATAGACGTTATTATCCCCATTTTACTCATT +
Preference number: 1 (lower is better)
Translates to: LPFQSSSSSYYLFFI*PSTSIDVIIPILLI
Trigger: AATGAGTAAAATGGGGATAATAACGTCTATTGATGTAGAGGGTCAAATGAAGAACAAATAGTAGCTGCTGCTACTTGACTGGAAAGGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR GCA 90 bp AAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCTCCCTGTCCTGTGGCTaGCTCCCAGAAGTGGAAGTT +
Preference number: 2 (lower is better)
Translates to: KETGQTGNLAALLWKENASLSCG*LPEVEV
Trigger: AACTTCCACTTCTGGGAGGCAGCCACAGGACAGGGA...GGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR CAA 90 bp GTCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTaGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTA +
Preference number: 2 (lower is better)
Translates to: VLLFSLNKETGQTGN*AALLWKENALEPQL
Trigger: TAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR TCA 90 bp GTAACAAGCAATCCAGGGTTCCTGTGTAGCCAGAACATCTGCCATCTCGAAGCACTGCCAGACCACAGGTaGAGCTTGAGAGGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: VTSNPGFLCSQNICHLEALPDHR*SLRGSG
Trigger: CCCACTTCCTCTCAAGCTTCACCTGTGGTCTGGCAG...TGCTTCGAGATGGCAGATGTTCTGGCTACACAGGAACCCTGGATTGCTTGTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
3UTR-3UTR GCA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCCACCAATACAGACCTTaGAACCTTCAAAGCCAACAC +
Preference number: 2 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSHQYRP*NLQSQH
Trigger: GTGTTGGCTTTGAAGGTTGCAAGGTCTGTATTGGTG...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR GCA 90 bp TCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACACTGTGGAAGGAGAATaGCCTGGAGCCCCAGCTAAC +
Preference number: 2 (lower is better)
Translates to: SFYSVSTKRLARLGIWPHTVEGE*PGAPAN
Trigger: GTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGT...GTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR TCA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCAAAGAAGAGGGAGAATaGCTTATTGTGTCTACAGAA +
Preference number: 2 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSKEEGE*LIVSTE
Trigger: TTCTGTAGACACAATAAGTCATTCTCCCTCTTCTTT...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR GCA 90 bp AAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCCAGTCTTCATCTGTTaGTCACATCCCAGAATCTGT +
Preference number: 2 (lower is better)
Translates to: KETGQTGNLAALLWKENAPVFIC*SHPRIC
Trigger: ACAGATTCTGGGATGTGAGCAACAGATGAAGACTGG...GGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR GCA 90 bp TCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACAGTCATGAGCTGAGATaGATCAGGAGCTACTCTCCC +
Preference number: 2 (lower is better)
Translates to: SFYSVSTKRLARLGIWPHSHELR*IRSYSP
Trigger: GGGAGAGTAGCTCCTGATGCATCTCAGCTCATGACT...GTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR GCA 90 bp CCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCTTTTCTAGGATCCATTTCCTaGACCGTTTATACCTGGGGT +
Preference number: 2 (lower is better)
Translates to: PVAASQKWKFLGFSQSSFLGSIS*TVYTWG
Trigger: ACCCCAGGTATAAACGGTGCAGGAAATGGATCCTAG...AAAAGATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR CAA 90 bp CTGCGCAGTAAGGGACACACCCTTCCACAGTCCTCTTGTCCCCTCTaGCTGGTAAATGTTCATGAAGTTGCCTATCATTCCTCCTTGAAT +
Preference number: 2 (lower is better)
Translates to: LRSKGHTLPQSSCPL*LVNVHEVAYHSSLN
Trigger: ATTCAAGGAGGAATGATAGGCAACTTCATGAACATTTACCAGCAAGAGGGGACAAGAGGACTGTGGAAGGGTGTGTCCCTTACTGCGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310862.11
3UTR-3UTR TCA 90 bp AGAGACCCAAATAAATATGTTCCCTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTCAGTCATGAGCTaGGATGCATCAGGAGCTACT +
Preference number: 2 (lower is better)
Translates to: RDPNKYVPCPVAASQKWKFSVMS*DASGAT
Trigger: AGTAGCTCCTGATGCATCTCAGCTCATGACTGAGAA...CTTCCACTTCTGGGAGGCAGCCACAGGACAGGGAACATATTTATTTGGGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR TCA 90 bp AAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCATTCACAATTACCATaGGAAGCCCATGAGAACATG +
Preference number: 2 (lower is better)
Translates to: KETGQTGNLAALLWKENAHSQLP*EAHENM
Trigger: CATGTTCTCATGGGCTTCTCATGGTAATTGTGAATG...GGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR TCA 90 bp CCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCTTTTAGGAGCTACTCTCCCTaGATAAAACAATACATCGCT +
Preference number: 2 (lower is better)
Translates to: PVAASQKWKFLGFSQSSFRSYSP*IKQYIA
Trigger: AGCGATGTATTGTTTTATTCAGGGAGAGTAGCTCCT...AAAAGATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR TCA 90 bp ATGCTTCTTGGTGATGTCATAGACCGGCAGCTCCACACCAACAACAATAGCAGCTGGATTAGCAATGGTTaGAGATATGACTCCAGACAG +
Preference number: 2 (lower is better)
Translates to: MLLGDVIDRQLHTNNNSSWISNG*RYDSRQ
Trigger: CTGTCTGGAGTCATATCTTCAACCATTGCTAATCCA...GCTGCTATTGTTGTTGGTGTGGAGCTGCCGGTCTATGACATCACCAAGAAGCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
3UTR-3UTR TCA 90 bp AGAGACCCAAATAAATATGTTCCCTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGAGGAGCTACTCTCCCTaGATAAAACAATACATCGCT +
Preference number: 2 (lower is better)
Translates to: RDPNKYVPCPVAASQKWKRSYSP*IKQYIA
Trigger: AGCGATGTATTGTTTTATTCAGGGAGAGTAGCTCCT...CTTCCACTTCTGGGAGGCAGCCACAGGACAGGGAACATATTTATTTGGGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR GCA 90 bp AATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGGTTCCAGTGAGCCCAGTCTTCATCTGTTaGTCACATCCCAGAATCTGT +
Preference number: 2 (lower is better)
Translates to: NSETITPSRRLHSMVPVSPVFIC*SHPRIC
Trigger: ACAGATTCTGGGATGTGAGCAACAGATGAAGACTGG...GCTCACTGGAACCATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR GCA 90 bp AGAGACCCAAATAAATATGTTCCCTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGATGAAGAGCATCCAATaGCAACACACAGCAATCTCA +
Preference number: 2 (lower is better)
Translates to: RDPNKYVPCPVAASQKWKMKSIQ*QHTAIS
Trigger: TGAGATTGCTGTGTGTTGGCATTGGATGCTCTTCAT...CTTCCACTTCTGGGAGGCAGCCACAGGACAGGGAACATATTTATTTGGGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR GCA 90 bp AATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGGTTCCAGTGAGCATGAAGAGCATCCAATaGCAACACACAGCAATCTCA +
Preference number: 2 (lower is better)
Translates to: NSETITPSRRLHSMVPVSMKSIQ*QHTAIS
Trigger: TGAGATTGCTGTGTGTTGGCATTGGATGCTCTTCAT...GCTCACTGGAACCATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR TCA 90 bp ACATCTGCCATCTCGAAGCACTCTCTGATTCATCATACGTGTCCTCACAACATCCAATGGTTGAAGATATaGCTCCAGACAGAATTCCAC +
Preference number: 2 (lower is better)
Translates to: TSAISKHSLIHHTCPHNIQWLKI*LQTEFH
Trigger: GTGGAATTCTGTCTGGAGTCATATCTTCAACCATTG...GATGTTGTGAGGACACGTATGATGAATCAGAGAGTGCTTCGAGATGGCAGATGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
3UTR-3UTR TCA 90 bp AGAGACCCAAATAAATATGTTCCCTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGACAATACATCGCTCCTaGTTTTCTTGCAAGTTTTCT +
Preference number: 2 (lower is better)
Translates to: RDPNKYVPCPVAASQKWKTIHRS*FSCKFS
Trigger: AGAAAACTTGCAAGAAAATCAGGAGCGATGTATTGT...CTTCCACTTCTGGGAGGCAGCCACAGGACAGGGAACATATTTATTTGGGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR CAA 90 bp TGTGATGAGCCAAGCAGTGAGAAGCAGAGTGAAACACAGGAAGCTTaGCTGTTTCAGAAGTTACCATTTTCAGAAAGATGTCTCATGCAG +
Preference number: 2 (lower is better)
Translates to: CDEPSSEKQSETQEA*LFQKLPFSERCLMQ
Trigger: CTGCATGAGACATCTTTCTGAAAATGGTAACTTCTGAAACAGCAAAGCTTCCTGTGTTTCACTCTGCTTCTCACTGCTTGGCTCATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR CAA 90 bp CCTGGGGTTGAACAGTCCAGGTCTCCATACATGAAATTTCTTCAGTaGACAAGGAGCAAAATCTCCCAGAAATTCAGAAACCATAACACC +
Preference number: 2 (lower is better)
Translates to: PGVEQSRSPYMKFLQ*TRSKISQKFRNHNT
Trigger: GGTGTTATGGTTTCTGAATTTCTGGGAGATTTTGCTCCTTGTCAACTGAAGAAATTTCATGTATGGAGACCTGGACTGTTCAACCCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR GCA 90 bp TACTGTCTGACATTCGCTCTTTACATGGTCATTAAAATGAATTTGCTTCTACTGACTGTGGAAGGAGAATaGCCTGGAGCCCCAGCTAAC +
Preference number: 2 (lower is better)
Translates to: YCLTFALYMVIKMNLLLLTVEGE*PGAPAN
Trigger: GTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGT...CAGTAGAAGCAAATTCATTTTAATGACCATGTAAAGAGCGAATGTCAGACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR TCA 90 bp TTTATACCTGGGGTTGAACAGTCCAGGTCTCCATACATGAAATTTCTTCAGTTGATTCCATGGTTCCAGTaGGCTTTTCTAGAGCAGTCT +
Preference number: 2 (lower is better)
Translates to: FIPGVEQSRSPYMKFLQLIPWFQ*AFLEQS
Trigger: AGACTGCTCTAGAAAAGCTCACTGGAACCATGGAAT...CAACTGAAGAAATTTCATGTATGGAGACCTGGACTGTTCAACCCCAGGTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR TCA 90 bp AAATCTCCCAGAAATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGACAATACATCGCTCCTaGTTTTCTTGCAAGTTTTCT +
Preference number: 2 (lower is better)
Translates to: KSPRNSETITPSRRLHSMTIHRS*FSCKFS
Trigger: AGAAAACTTGCAAGAAAATCAGGAGCGATGTATTGT...CATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATTTCTGGGAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR CCA 90 bp TGGGCTCCTGAACAGGTCACAAATAAAGAAGCAATAGTGGTAGAGATATCATTCTCCCAAGATGTCAGGTaGATGAATACGATAAGTGTC +
Preference number: 2 (lower is better)
Translates to: WAPEQVTNKEAIVVEISFSQDVR*MNTISV
Trigger: GACACTTATCGTATTCATCCACCTGACATCTTGGGA...GAATGATATCTCTACCACTATTGCTTCTTTATTTGTGACCTGTTCAGGAGCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618165.1
3UTR-3UTR TCA 90 bp TTAGCAATGGTTGAAGATATGACTCCAGACAGAATTCCACATATCACATTTATCCTTCTGGGCGTTCAATaGATAGTCGCTTCAAGCTCT +
Preference number: 2 (lower is better)
Translates to: LAMVEDMTPDRIPHITFILLGVQ*IVASSS
Trigger: AGAGCTTGAAGCGACTATTCATTGAACGCCCAGAAG...GATAAATGTGATATGTGGAATTCTGTCTGGAGTCATATCTTCAACCATTGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
3UTR-3UTR TCA 90 bp TTGAATGGTGTTGCTTTGCGCTTGCATCCGAATTTTCAAAACATCAGTTGGATTCAATGGTTGAAGATATaGCTCCAGACAGAATTCCAC +
Preference number: 2 (lower is better)
Translates to: LNGVALRLHPNFQNISWIQWLKI*LQTEFH
Trigger: GTGGAATTCTGTCTGGAGTCATATCTTCAACCATTG...AATCCAACTGATGTTTTGAAAATTCGGATGCAAGCGCAAAGCAACACCATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
3UTR-3UTR GCA 90 bp TACTGTCTGACATTCGCTCTTTACATGGTCATTAAAATGAATTTGCTTCTACTGCTAGGATCCATTTCCTaGACCGTTTATACCTGGGGT +
Preference number: 2 (lower is better)
Translates to: YCLTFALYMVIKMNLLLLLGSIS*TVYTWG
Trigger: ACCCCAGGTATAAACGGTGCAGGAAATGGATCCTAG...CAGTAGAAGCAAATTCATTTTAATGACCATGTAAAGAGCGAATGTCAGACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR CCA 90 bp TACTGTCTGACATTCGCTCTTTACATGGTCATTAAAATGAATTTGCTTCTACTGTCTCAACAAAGAGACTaGCCAGACTGGGAATTTGGC +
Preference number: 2 (lower is better)
Translates to: YCLTFALYMVIKMNLLLLSQQRD*PDWEFG
Trigger: GCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGA...CAGTAGAAGCAAATTCATTTTAATGACCATGTAAAGAGCGAATGTCAGACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR CAA 90 bp TTGCAAGTTTTCTTTAGCAAGAAACATGCATTTCACATATTATCTTaGATGTTGAAGGGCACTTCAGTGGTAAAGACTAGTGTTTGGATG +
Preference number: 2 (lower is better)
Translates to: LQVFFSKKHAFHILS*MLKGTSVVKTSVWM
Trigger: CATCCAAACACTAGTCTTTACCACTGAAGTGCCCTTCAACATCAAAGATAATATGTGAAATGCATGTTTCTTGCTAAAGAAAACTTGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR TCA 90 bp TACTGTCTGACATTCGCTCTTTACATGGTCATTAAAATGAATTTGCTTCTACTGAAAGAAGAGGGAGAATaGCTTATTGTGTCTACAGAA +
Preference number: 2 (lower is better)
Translates to: YCLTFALYMVIKMNLLLLKEEGE*LIVSTE
Trigger: TTCTGTAGACACAATAAGTCATTCTCCCTCTTCTTT...CAGTAGAAGCAAATTCATTTTAATGACCATGTAAAGAGCGAATGTCAGACAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR GCA 72 bp ACCGGCAGCTCCACACCAACAACAATAGCAGCCCTCTaGGCAGTAAGGGACACACCCTTCCACAGTCCTCTT +
Preference number: 3 (lower is better)
Translates to: TGSSTPTTIAAL*AVRDTPFHSPL
Trigger: AAGAGGACTGTGGAAGGGTGTGTCCCTTACTGCGCAGAGGGCTGCTATTGTTGTTGGTGTGGAGCTGCCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
3UTR CCA 72 bp GAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTaGAAGGAGAATGCCCTGGAGCCCCAGCTAACATGT +
Preference number: 3 (lower is better)
Translates to: ETGQTGNLAALL*KENALEPQLTC
Trigger: ACATGTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR CAA 90 bp TGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTAACCCCAGTCTTCATCTGTaGCTCACATCCCAGAATCTG +
Preference number: 3 (lower is better)
Translates to: WEFGRTTVEGECPGAPANPSLHL*LTSQNL
Trigger: CAGATTCTGGGATGTGAGCAACAGATGAAGACTGGG...GTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR CCA 72 bp TCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTaGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGC +
Preference number: 3 (lower is better)
Translates to: SVSTKRLARLGI*PHYCGRRMPWS
Trigger: GCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR CAA 90 bp CCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCTTTTCCCAGTCTTCATCTGTaGCTCACATCCCAGAATCTG +
Preference number: 3 (lower is better)
Translates to: PVAASQKWKFLGFSQSSFPSLHL*LTSQNL
Trigger: CAGATTCTGGGATGTGAGCAACAGATGAAGACTGGG...AAAAGATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR CAA 90 bp TCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACCGTTTATACCTGGGGTaGAACAGTCCAGGTCTCCAT +
Preference number: 3 (lower is better)
Translates to: SFYSVSTKRLARLGIWPHRLYLG*NSPGLH
Trigger: ATGGAGACCTGGACTGTTCAACCCCAGGTATAAACG...GTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR CAA 90 bp TCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGACCACCAATACAGACCTaGCAACCTTCAAAGCCAACA +
Preference number: 3 (lower is better)
Translates to: STKRLARLGIWPHYCGRRPPIQT*QPSKPT
Trigger: TGTTGGCTTTGAAGGTTGCAAGGTCTGTATTGGTGG...TCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR CAA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCAACATGTATTTAATGTaGTTCTCAAAGGGGGAACTG +
Preference number: 3 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSNMYLM*FSKGEL
Trigger: CAGTTCCCCCTTTGAGAACAACATTAAATACATGTT...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR CCA 72 bp ACCTGCAGTCCTTCTATTCAGTCTCAACAAAGAGACTaGCCAGACTGGGAATTTGGCCGCACTACTGTGGAA +
Preference number: 3 (lower is better)
Translates to: TCSPSIQSQQRD*PDWEFGRTTVE
Trigger: TTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGACTGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR CAA 90 bp TGTGTAGCCAGAACATCTGCCATCTCGAAGCACTCTCTGATTCATCATACGTGTCCTTCCACAGTCCTCTaGTCCCCTCTTGCTGGTAAA +
Preference number: 3 (lower is better)
Translates to: CVARTSAISKHSLIHHTCPSTVL*SPLAGK
Trigger: TTTACCAGCAAGAGGGGACAAGAGGACTGTGGAAGG...ACACGTATGATGAATCAGAGAGTGCTTCGAGATGGCAGATGTTCTGGCTACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310862.11
3UTR-3UTR CAA 90 bp CCTGCAGTCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGCGTTTATACCTGGGGTaGAACAGTCCAGGTCTCCAT +
Preference number: 3 (lower is better)
Translates to: PAVLLFSLNKETGQTGNLRLYLG*NSPGLH
Trigger: ATGGAGACCTGGACTGTTCAACCCCAGGTATAAACG...CAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGACTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR CAA 90 bp TCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACCCACCAATACAGACCTaGCAACCTTCAAAGCCAACA +
Preference number: 3 (lower is better)
Translates to: SFYSVSTKRLARLGIWPHPPIQT*QPSKPT
Trigger: TGTTGGCTTTGAAGGTTGCAAGGTCTGTATTGGTGG...GTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR GCA 72 bp ACAAGCAATCCAGGGTTCCTGTGTAGCCAGAACATCTaGCATCTCGAAGCACTCTCTGATTCATCATACGTG +
Preference number: 3 (lower is better)
Translates to: TSNPGFLCSQNI*HLEALSDSSYV
Trigger: CACGTATGATGAATCAGAGAGTGCTTCGAGATGGCAGATGTTCTGGCTACACAGGAACCCTGGATTGCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
3UTR-3UTR CAA 90 bp ACATCTGCCATCTCGAAGCACTCTCTGATTCATCATACGTGTCCTCACAACATCGCCTATCATTCCTCCTaGAATGGTGTTGCTTTGCGC +
Preference number: 3 (lower is better)
Translates to: TSAISKHSLIHHTCPHNIAYHSS*NGVALR
Trigger: GCGCAAAGCAACACCATTCAAGGAGGAATGATAGGC...GATGTTGTGAGGACACGTATGATGAATCAGAGAGTGCTTCGAGATGGCAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
3UTR-3UTR CAA 90 bp CCTGCAGTCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGCAGAAGTGGAAGTTCTaGGGGTTCTCACAGTCATCT +
Preference number: 3 (lower is better)
Translates to: PAVLLFSLNKETGQTGNLQKWKF*GFSQSS
Trigger: AGATGACTGTGAGAACCCCAAGAACTTCCACTTCTG...CAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGACTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR CAA 90 bp TCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAAGGGAGAATGACTTATaGTGTCTACAGAAGGAAAGA +
Preference number: 3 (lower is better)
Translates to: STKRLARLGIWPHYCGRRRENDL*CLQKER
Trigger: TCTTTCCTTCTGTAGACACAATAAGTCATTCTCCCT...TCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR TCA 72 bp GAGGAAGTGGGTATACACAGTGTCTCCCATCAGGCCTaGGAGAATAAGATGCTTCTTGGTGATGTCATAGAC +
Preference number: 3 (lower is better)
Translates to: EEVGIHSVSHQA*ENKMLLGDVID
Trigger: GTCTATGACATCACCAAGAAGCATCTTATTCTCTCAGGCCTGATGGGAGACACTGTGTATACCCACTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
3UTR GCA 72 bp CACACAGCAATCTCAACTAACCCAGTCTTCATCTGTTaGTCACATCCCAGAATCTGTGATGAGCCAAGCAGT +
Preference number: 3 (lower is better)
Translates to: HTAISTNPVFIC*SHPRICDEPSS
Trigger: ACTGCTTGGCTCATCACAGATTCTGGGATGTGAGCAACAGATGAAGACTGGGTTAGTTGAGATTGCTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR CAA 90 bp AGAGACCCAAATAAATATGTTCCCTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTATGCCATTAAACGTTaGATGAAGAGCATCCAATGC +
Preference number: 3 (lower is better)
Translates to: RDPNKYVPCPVAASQKWKYAIKR*MKSIQC
Trigger: GCATTGGATGCTCTTCATCAAACGTTTAATGGCATA...CTTCCACTTCTGGGAGGCAGCCACAGGACAGGGAACATATTTATTTGGGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR CAA 90 bp ACATCTGCCATCTCGAAGCACTCTCTGATTCATCATACGTGTCCTCACAACATCTTGAATGGTGTTGCTTaGCGCTTGCATCCGAATTTT +
Preference number: 3 (lower is better)
Translates to: TSAISKHSLIHHTCPHNILNGVA*RLHPNF
Trigger: AAAATTCGGATGCAAGCGCAAAGCAACACCATTCAA...GATGTTGTGAGGACACGTATGATGAATCAGAGAGTGCTTCGAGATGGCAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
3UTR TCA 72 bp CTAGGATCCATTTCCTGCACCGTTTATACCTGGGGTTaGACAGTCCAGGTCTCCATACATGAAATTTCTTCA +
Preference number: 3 (lower is better)
Translates to: LGSISCTVYTWG*TVQVSIHEISS
Trigger: TGAAGAAATTTCATGTATGGAGACCTGGACTGTTCAACCCCAGGTATAAACGGTGCAGGAAATGGATCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR CAA 90 bp AATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGGTTCCAGTGAGCATATTATCTTTGATGTaGAAGGGCACTTCAGTGGTA +
Preference number: 3 (lower is better)
Translates to: NSETITPSRRLHSMVPVSILSLM*KGTSVV
Trigger: TACCACTGAAGTGCCCTTCAACATCAAAGATAATAT...GCTCACTGGAACCATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR TCA 72 bp AGTCATGAGCTGAGATGCATCAGGAGCTACTCTCCCTaGATAAAACAATACATCGCTCCTGATTTTCTTGCA +
Preference number: 3 (lower is better)
Translates to: SHELRCIRSYSP*IKQYIAPDFLA
Trigger: TGCAAGAAAATCAGGAGCGATGTATTGTTTTATTCAGGGAGAGTAGCTCCTGATGCATCTCAGCTCATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR GCA 72 bp GTTTATGCCATTAAACGTTTGATGAAGAGCATCCAATaGCAACACACAGCAATCTCAACTAACCCAGTCTTC +
Preference number: 3 (lower is better)
Translates to: VYAIKRLMKSIQ*QHTAISTNPVF
Trigger: GAAGACTGGGTTAGTTGAGATTGCTGTGTGTTGGCATTGGATGCTCTTCATCAAACGTTTAATGGCATAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR CAA 90 bp TTTATACCTGGGGTTGAACAGTCCAGGTCTCCATACATGAAATTTCTTCAGTTGTATGCCATTAAACGTTaGATGAAGAGCATCCAATGC +
Preference number: 3 (lower is better)
Translates to: FIPGVEQSRSPYMKFLQLYAIKR*MKSIQC
Trigger: GCATTGGATGCTCTTCATCAAACGTTTAATGGCATA...CAACTGAAGAAATTTCATGTATGGAGACCTGGACTGTTCAACCCCAGGTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR TCA 72 bp CAGTCAAGTAGCAGCAGCTACTATTTGTTCTTCATTTaGCCCTCTACATCAATAGACGTTATTATCCCCATT +
Preference number: 3 (lower is better)
Translates to: QSSSSSYYLFFI*PSTSIDVIIPI
Trigger: AATGGGGATAATAACGTCTATTGATGTAGAGGGTCAAATGAAGAACAAATAGTAGCTGCTGCTACTTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR-3UTR CAA 90 bp TACTGTCTGACATTCGCTCTTTACATGGTCATTAAAATGAATTTGCTTCTACTGATATTATCTTTGATGTaGAAGGGCACTTCAGTGGTA +
Preference number: 3 (lower is better)
Translates to: YCLTFALYMVIKMNLLLLILSLM*KGTSVV
Trigger: TACCACTGAAGTGCCCTTCAACATCAAAGATAATAT...CAGTAGAAGCAAATTCATTTTAATGACCATGTAAAGAGCGAATGTCAGACAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCGCAGCAAGGCCTGAATaGGCTCTGGGGTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSAARPE*ALGSSA
Trigger: AGCAGAGGACCCCAGAGCTCATTCAGGCCTTGCTGC...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp TGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTAACCAGTGCTGTTTTTCCTaGCGGCAGCGGCCCCACACC +
Preference number: 4 (lower is better)
Translates to: WEFGRTTVEGECPGAPANQCCFS*RQRPHT
Trigger: GGTGTGGGGCCGCTGCCGCCAGGAAAAACAGCACTG...GTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519676.6
CDS-3UTR GCA 90 bp AAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCAGCTCTGGGGTCCTCTaGTGCCCTCTAGGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: KETGQTGNLAALLWKENASSGVL*CPLGLP
Trigger: GGGCAACCCTAGAGGGCAGCAGAGGACCCCAGAGCT...GGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTTGGCCGCACTACTGTaGAAGGAGAATGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSLAALL*KENALE
Trigger: CTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAA...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCGCCAGACTGGGAATTTaGCCGCACTACTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSARLGI*PHYCGR
Trigger: CCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGC...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp AAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCGCAGCAAGGCCTGAATaGGCTCTGGGGTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KETGQTGNLAALLWKENAAARPE*ALGSSA
Trigger: AGCAGAGGACCCCAGAGCTCATTCAGGCCTTGCTGC...GGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp CCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCTTTTAGCTCTGGGGTCCTCTaGTGCCCTCTAGGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: PVAASQKWKFLGFSQSSFSSGVL*CPLGLP
Trigger: GGGCAACCCTAGAGGGCAGCAGAGGACCCCAGAGCT...AAAAGATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCAGAGACTGGCCAGACTaGGAATTTGGCCGCACTACT +
Preference number: 4 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSRDWPD*EFGRTT
Trigger: AGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCT...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCGTTGTAACAAGAACCTaGGGCCGCTGGAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSVVTRT*GRWRKG
Trigger: TCCTTTTCTCCAGCGGCCTCAGGTTCTTGTTACAAC...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539591.5
CDS-3UTR TCA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCGGTAAGTGCCTATCTTaGTGGTGCCATAGGATGCCT +
Preference number: 4 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSGKCLS*WCHRMP
Trigger: AGGCATCCTATGGCACCATCAAGATAGGCACTTACC...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp TTCCAATTACGGTCTGTTGCTTCCGTGCCATGTGGGCTCCTGAACAGGTCACAAAACATCAACAGGGTTTaGGGCCAGGGCCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: FQLRSVASVPCGLLNRSQNINRV*GQGPCQ
Trigger: CTGGCAGGGGCCCTGGCCTCAAACCCTGTTGATGTT...TTGTGACCTGTTCAGGAGCCCACATGGCACGGAAGCAACAGACCGTAATTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618165.1
CDS-3UTR TCA 90 bp TGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTAACTCATTCGTCTGGCCTTaGATCTGGAGCCGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: WEFGRTTVEGECPGAPANSFVWP*IWSRVL
Trigger: CAAGACACGGCTCCAGATTCAAGGCCAGACGAATGA...GTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp CTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCACTGTGGAAGGAGAATaGCCTGGAGCCCCAGCTAAC +
Preference number: 4 (lower is better)
Translates to: LSCGCLPEVEVLGVLTVITVEGE*PGAPAN
Trigger: GTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGT...GATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp AAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCAATTGGAAATGTACCTaGCGGCAGCGGCCCCACACC +
Preference number: 4 (lower is better)
Translates to: KETGQTGNLAALLWKENANWKCT*RQRPHT
Trigger: GGTGTGGGGCCGCTGCCGCCAGGTACATTTCCAATT...GGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539591.5
CDS-3UTR CCA 90 bp CCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCTTTTGGCCTGAATGAGCTCTaGGGTCCTCTGCTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PVAASQKWKFLGFSQSSFGLNEL*GPLLPS
Trigger: AGAGGGCAGCAGAGGACCCCAGAGCTCATTCAGGCC...AAAAGATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp TCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACAACATCAACAGGGTTTaGGGCCAGGGCCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SFYSVSTKRLARLGIWPHNINRV*GQGPCQ
Trigger: CTGGCAGGGGCCCTGGCCTCAAACCCTGTTGATGTT...GTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTTCTCAGTCATGAGCTaGGATGCATCAGGAGCTACT +
Preference number: 4 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSFSVMS*DASGAT
Trigger: AGTAGCTCCTGATGCATCTCAGCTCATGACTGAGAA...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp CCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCTTTTACAAGCAGCAAGGCCTaGATGAGCTCTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PVAASQKWKFLGFSQSSFTSSKA*MSSGVL
Trigger: GAGGACCCCAGAGCTCATTCAGGCCTTGCTGCTTGT...AAAAGATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCAATCCCCGAGTAGAGTaGTTTCAGCCCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSNPRVE*FQPFFS
Trigger: AGAGAAGAAGGGCTGAAAGCACTCTACTCGGGGATT...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp TGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTAACAGTCATGAGCTGAGATaGATCAGGAGCTACTCTCCC +
Preference number: 4 (lower is better)
Translates to: WEFGRTTVEGECPGAPANSHELR*IRSYSP
Trigger: GGGAGAGTAGCTCCTGATGCATCTCAGCTCATGACT...GTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp TGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTAACTCTCGAAGCACTCTCTaGTTCATCATACGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: WEFGRTTVEGECPGAPANSRSTL*FIIRVL
Trigger: GAGGACACGTATGATGAATCAGAGAGTGCTTCGAGA...GTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp CTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCACCATGAGAAGCCCATaGGAACATGCCCCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: LSCGCLPEVEVLGVLTVITMRSP*EHAPLL
Trigger: TAGAAGAGGGGCATGTTCTCATGGGCTTCTCATGGT...GATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp CCAATTACGGTCTGTTGCTTCCGTGCCATGTGGGCTCCTGAACAGGTCACAAATACAATAGCAGCCCTCTaGGCAGTAAGGGACACACCC +
Preference number: 4 (lower is better)
Translates to: PITVCCFRAMWAPEQVTNTIAAL*AVRDTP
Trigger: GGGTGTGTCCCTTACTGCGCAGAGGGCTGCTATTGT...ATTTGTGACCTGTTCAGGAGCCCACATGGCACGGAAGCAACAGACCGTAATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618165.1
CDS-3UTR CCA 90 bp TCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGATTGGCCGCACTACTGTaGAAGGAGAATGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: STKRLARLGIWPHYCGRRLAALL*KENALE
Trigger: CTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAA...TCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp AATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGGTTCCAGTGAGCGGCCTGAATGAGCTCTaGGGTCCTCTGCTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: NSETITPSRRLHSMVPVSGLNEL*GPLLPS
Trigger: AGAGGGCAGCAGAGGACCCCAGAGCTCATTCAGGCC...GCTCACTGGAACCATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR CAA 72 bp TTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTaGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FSLNKETGQTGN*AALLWKENALE
Trigger: CTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTGGATTAGCAATGGTTaGAGATATGACTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSWISNG*RYDSRQ
Trigger: CTGTCTGGAGTCATATCTTCAACCATTGCTAATCCA...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp AATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGGTTCCAGTGAGCCTGCCAGACCACAGGTaGAGCTTGAGAGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: NSETITPSRRLHSMVPVSLPDHR*SLRGSG
Trigger: CCCACTTCCTCTCAAGCTTCACCTGTGGTCTGGCAG...GCTCACTGGAACCATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp TGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTAACCAGAAAGATGTCTCATaGAGCCTTGGCTTGTCACAA +
Preference number: 4 (lower is better)
Translates to: WEFGRTTVEGECPGAPANQKDVS*SLGLSQ
Trigger: TTGTGACAAGCCAAGGCTGCATGAGACATCTTTCTG...GTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp TCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTCCCTGTCCTGTGGCTaGCTCCCAGAAGTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: SFYSVSTKRLARLGIWPHSLSCG*LPEVEV
Trigger: AACTTCCACTTCTGGGAGGCAGCCACAGGACAGGGA...GTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp TGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTAACCAAAGGGACCATTCATaGATAAGGAAGGCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: WEFGRTTVEGECPGAPANQRDHS*IRKARE
Trigger: TTCCCTTGCCTTCCTTATGCATGAATGGTCCCTTTG...GTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCAGAAGTGGAAGTTCTTaGGGTTCTCACAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSRSGSS*GSHSHL
Trigger: AAGATGACTGTGAGAACCCCAAGAACTTCCACTTCT...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp TCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAGGTAAGTGCCTATCTTaGTGGTGCCATAGGATGCCT +
Preference number: 4 (lower is better)
Translates to: STKRLARLGIWPHYCGRRGKCLS*WCHRMP
Trigger: AGGCATCCTATGGCACCATCAAGATAGGCACTTACC...TCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp AAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTTCTGGGCGTTCAATaGATAGTCGCTTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: KETGQTGNLAALLWKENALLGVQ*IVASSS
Trigger: AGAGCTTGAAGCGACTATTCATTGAACGCCCAGAAG...GGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp AAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCGTCTCCCATCAGGCCTaGGAGAATAAGATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KETGQTGNLAALLWKENAVSHQA*ENKMLL
Trigger: AAGAAGCATCTTATTCTCTCAGGCCTGATGGGAGAC...GGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp TCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTCATTCGTCTGGCCTTaGATCTGGAGCCGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SFYSVSTKRLARLGIWPHSFVWP*IWSRVL
Trigger: CAAGACACGGCTCCAGATTCAAGGCCAGACGAATGA...GTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCGTGTTGCTTTGCGCTTaGATCCGAATTTTCAAAACA +
Preference number: 4 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSVLLCA*IRIFKT
Trigger: TGTTTTGAAAATTCGGATGCAAGCGCAAAGCAACAC...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp CCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCTTTTAAACATTGCCTCCAGTaGTGTTTTTCCTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PVAASQKWKFLGFSQSSFKHCLQ*CFSWRQ
Trigger: CTGCCGCCAGGAAAAACAGCACTGGAGGCAATGTTT...AAAAGATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519676.6
CDS-3UTR GCA 90 bp CCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCTTTTAGTCATGAGCTGAGATaGATCAGGAGCTACTCTCCC +
Preference number: 4 (lower is better)
Translates to: PVAASQKWKFLGFSQSSFSHELR*IRSYSP
Trigger: GGGAGAGTAGCTCCTGATGCATCTCAGCTCATGACT...AAAAGATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp CCTGCAGTCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGTCCCTGTCCTGTGGCTaGCTCCCAGAAGTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: PAVLLFSLNKETGQTGNLSLSCG*LPEVEV
Trigger: AACTTCCACTTCTGGGAGGCAGCCACAGGACAGGGA...CAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGACTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp AATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGGTTCCAGTGAGCACTGTGGAAGGAGAATaGCCTGGAGCCCCAGCTAAC +
Preference number: 4 (lower is better)
Translates to: NSETITPSRRLHSMVPVSTVEGE*PGAPAN
Trigger: GTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGT...GCTCACTGGAACCATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp AGAGACCCAAATAAATATGTTCCCTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGAGAGACTGGCCAGACTaGGAATTTGGCCGCACTACT +
Preference number: 4 (lower is better)
Translates to: RDPNKYVPCPVAASQKWKRDWPD*EFGRTT
Trigger: AGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCT...CTTCCACTTCTGGGAGGCAGCCACAGGACAGGGAACATATTTATTTGGGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp CCAATTACGGTCTGTTGCTTCCGTGCCATGTGGGCTCCTGAACAGGTCACAAATGTCTCCCATCAGGCCTaGGAGAATAAGATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PITVCCFRAMWAPEQVTNVSHQA*ENKMLL
Trigger: AAGAAGCATCTTATTCTCTCAGGCCTGATGGGAGAC...ATTTGTGACCTGTTCAGGAGCCCACATGGCACGGAAGCAACAGACCGTAATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618165.1
CDS-3UTR TCA 90 bp GTTGCCTATCATTCCTCCTTGAATGGTGTTGCTTTGCGCTTGCATCCGAATTTTCTGCCAGACCACAGGTaGAGCTTGAGAGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: VAYHSSLNGVALRLHPNFLPDHR*SLRGSG
Trigger: CCCACTTCCTCTCAAGCTTCACCTGTGGTCTGGCAG...AAAATTCGGATGCAAGCGCAAAGCAACACCATTCAAGGAGGAATGATAGGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR TCA 90 bp AAATCTCCCAGAAATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGCTGCCAGACCACAGGTaGAGCTTGAGAGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: KSPRNSETITPSRRLHSMLPDHR*SLRGSG
Trigger: CCCACTTCCTCTCAAGCTTCACCTGTGGTCTGGCAG...CATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATTTCTGGGAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp AGAGACCCAAATAAATATGTTCCCTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGACCATGAGAAGCCCATaGGAACATGCCCCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: RDPNKYVPCPVAASQKWKTMRSP*EHAPLL
Trigger: TAGAAGAGGGGCATGTTCTCATGGGCTTCTCATGGT...CTTCCACTTCTGGGAGGCAGCCACAGGACAGGGAACATATTTATTTGGGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp CTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCCATTCACAATTACCATaGGAAGCCCATGAGAACATG +
Preference number: 4 (lower is better)
Translates to: LSCGCLPEVEVLGVLTVIHSQLP*EAHENM
Trigger: CATGTTCTCATGGGCTTCTCATGGTAATTGTGAATG...GATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp AAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCAGCTGGACTTTCATCTaGGTCTCAGCAATTAACAGG +
Preference number: 4 (lower is better)
Translates to: KETGQTGNLAALLWKENASWTFI*VSAINR
Trigger: CCTGTTAATTGCTGAGACTCAGATGAAAGTCCAGCT...GGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp TGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTAACGTGTTGCTTTGCGCTTaGATCCGAATTTTCAAAACA +
Preference number: 4 (lower is better)
Translates to: WEFGRTTVEGECPGAPANVLLCA*IRIFKT
Trigger: TGTTTTGAAAATTCGGATGCAAGCGCAAAGCAACAC...GTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp CTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCATGAAGAGCATCCAATaGCAACACACAGCAATCTCA +
Preference number: 4 (lower is better)
Translates to: LSCGCLPEVEVLGVLTVIMKSIQ*QHTAIS
Trigger: TGAGATTGCTGTGTGTTGGCATTGGATGCTCTTCAT...GATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp ACTCCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTTCATCTTCTGGGAACATCAACAGGGTTTaGGGCCAGGGCCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TPDRIPHITFIGRVSSSGNINRV*GQGPCQ
Trigger: CTGGCAGGGGCCCTGGCCTCAAACCCTGTTGATGTT...CCCAGAAGATGAAACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR TCA 90 bp TCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTCTCGAAGCACTCTCTaGTTCATCATACGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SFYSVSTKRLARLGIWPHSRSTL*FIIRVL
Trigger: GAGGACACGTATGATGAATCAGAGAGTGCTTCGAGA...GTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp TCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATTCCATGGTTCCAGTaGGCTTTTCTAGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: STKRLARLGIWPHYCGRRIPWFQ*AFLEQS
Trigger: AGACTGCTCTAGAAAAGCTCACTGGAACCATGGAAT...TCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp AGAGACCCAAATAAATATGTTCCCTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTGTAGCCAGAACATCTaGCATCTCGAAGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: RDPNKYVPCPVAASQKWKCSQNI*HLEALS
Trigger: AGAGAGTGCTTCGAGATGGCAGATGTTCTGGCTACA...CTTCCACTTCTGGGAGGCAGCCACAGGACAGGGAACATATTTATTTGGGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp GTCTGTTGCTTCCGTGCCATGTGGGCTCCTGAACAGGTCACAAATAAAGAAGCATGTAGCCAGAACATCTaGCATCTCGAAGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: VCCFRAMWAPEQVTNKEACSQNI*HLEALS
Trigger: AGAGAGTGCTTCGAGATGGCAGATGTTCTGGCTACA...TGCTTCTTTATTTGTGACCTGTTCAGGAGCCCACATGGCACGGAAGCAACAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618165.1
CDS-3UTR GCA 90 bp TCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTCAGCCCTTCTTCTCTaGCTATCCTCACTAATGCGT +
Preference number: 4 (lower is better)
Translates to: SFYSVSTKRLARLGIWPHSALLL*LSSLMR
Trigger: ACGCATTAGTGAGGATAGGCAGAGAAGAAGGGCTGA...GTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp AAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCTGTCTCATGCAGCCTTaGCTTGTCACAAATCCAATT +
Preference number: 4 (lower is better)
Translates to: KETGQTGNLAALLWKENACLMQP*LVTNPI
Trigger: AATTGGATTTGTGACAAGCCAAGGCTGCATGAGACA...GGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp AGAGACCCAAATAAATATGTTCCCTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTCTCAACAAAGAGACTaGCCAGACTGGGAATTTGGC +
Preference number: 4 (lower is better)
Translates to: RDPNKYVPCPVAASQKWKSQQRD*PDWEFG
Trigger: GCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGA...CTTCCACTTCTGGGAGGCAGCCACAGGACAGGGAACATATTTATTTGGGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp AATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGGTTCCAGTGAGCCTTCTGGGCGTTCAATaGATAGTCGCTTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: NSETITPSRRLHSMVPVSLLGVQ*IVASSS
Trigger: AGAGCTTGAAGCGACTATTCATTGAACGCCCAGAAG...GCTCACTGGAACCATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp TCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGACAATGGTTGAAGATATaGCTCCAGACAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: STKRLARLGIWPHYCGRRQWLKI*LQTEFH
Trigger: GTGGAATTCTGTCTGGAGTCATATCTTCAACCATTG...TCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp CCTGCAGTCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGCCTATCATTCCTCCTTaGATGGTGTTGCTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: PAVLLFSLNKETGQTGNLPIIPP*MVLLCA
Trigger: AGCGCAAAGCAACACCATTCAAGGAGGAATGATAGG...CAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGACTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp CCTGCAGTCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGTCTCCCATCAGGCCTaGGAGAATAAGATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PAVLLFSLNKETGQTGNLVSHQA*ENKMLL
Trigger: AAGAAGCATCTTATTCTCTCAGGCCTGATGGGAGAC...CAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGACTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp ATGTGGGCTCCTGAACAGGTCACAAATAAAGAAGCAATAGTGGTAGAGATATCACTGCCAGACCACAGGTaGAGCTTGAGAGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: MWAPEQVTNKEAIVVEISLPDHR*SLRGSG
Trigger: CCCACTTCCTCTCAAGCTTCACCTGTGGTCTGGCAG...TGATATCTCTACCACTATTGCTTCTTTATTTGTGACCTGTTCAGGAGCCCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618165.1
CDS-3UTR TCA 90 bp CTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCACAATACATCGCTCCTaGTTTTCTTGCAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LSCGCLPEVEVLGVLTVITIHRS*FSCKFS
Trigger: AGAAAACTTGCAAGAAAATCAGGAGCGATGTATTGT...GATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp AGAGACCCAAATAAATATGTTCCCTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGAGCTGGACTTTCATCTaGGTCTCAGCAATTAACAGG +
Preference number: 4 (lower is better)
Translates to: RDPNKYVPCPVAASQKWKSWTFI*VSAINR
Trigger: CCTGTTAATTGCTGAGACTCAGATGAAAGTCCAGCT...CTTCCACTTCTGGGAGGCAGCCACAGGACAGGGAACATATTTATTTGGGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp AAACGTTTGATGAAGAGCATCCAATGCCAACACACAGCAATCTCAACTAACCCAACAATAGCAGCCCTCTaGGCAGTAAGGGACACACCC +
Preference number: 4 (lower is better)
Translates to: KRLMKSIQCQHTAISTNPTIAAL*AVRDTP
Trigger: GGGTGTGTCCCTTACTGCGCAGAGGGCTGCTATTGT...TGGGTTAGTTGAGATTGCTGTGTGTTGGCATTGGATGCTCTTCATCAAACGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp CCTGCAGTCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGTGTAGCCAGAACATCTaGCATCTCGAAGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: PAVLLFSLNKETGQTGNLCSQNI*HLEALS
Trigger: AGAGAGTGCTTCGAGATGGCAGATGTTCTGGCTACA...CAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGACTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp TGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTAACAATTTCCTTAAATTTTaGATCATTCGTCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: WEFGRTTVEGECPGAPANNFLKF*IIRLAL
Trigger: CAAGGCCAGACGAATGATGCAAAATTTAAGGAAATT...GTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp CCTGCAGTCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGTCAGCCCTTCTTCTCTaGCTATCCTCACTAATGCGT +
Preference number: 4 (lower is better)
Translates to: PAVLLFSLNKETGQTGNLSALLL*LSSLMR
Trigger: ACGCATTAGTGAGGATAGGCAGAGAAGAAGGGCTGA...CAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGACTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp CCTGCAGTCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGAATCCCCGAGTAGAGTaGTTTCAGCCCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PAVLLFSLNKETGQTGNLNPRVE*FQPFFS
Trigger: AGAGAAGAAGGGCTGAAAGCACTCTACTCGGGGATT...CAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGACTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp TCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACCAGAAAGATGTCTCATaGAGCCTTGGCTTGTCACAA +
Preference number: 4 (lower is better)
Translates to: SFYSVSTKRLARLGIWPHQKDVS*SLGLSQ
Trigger: TTGTGACAAGCCAAGGCTGCATGAGACATCTTTCTG...GTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp AGAGACCCAAATAAATATGTTCCCTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGCCAGTCTTCATCTGTTaGTCACATCCCAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: RDPNKYVPCPVAASQKWKPVFIC*SHPRIC
Trigger: ACAGATTCTGGGATGTGAGCAACAGATGAAGACTGG...CTTCCACTTCTGGGAGGCAGCCACAGGACAGGGAACATATTTATTTGGGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp AATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGGTTCCAGTGAGCCTAGGATCCATTTCCTaGACCGTTTATACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: NSETITPSRRLHSMVPVSLGSIS*TVYTWG
Trigger: ACCCCAGGTATAAACGGTGCAGGAAATGGATCCTAG...GCTCACTGGAACCATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp TCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACCACCAATACAGACCTTaGAACCTTCAAAGCCAACAC +
Preference number: 4 (lower is better)
Translates to: SFYSVSTKRLARLGIWPHHQYRP*NLQSQH
Trigger: GTGTTGGCTTTGAAGGTTGCAAGGTCTGTATTGGTG...GTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp ATGGTTGAAGATATGACTCCAGACAGAATTCCACATATCACATTTATCGGTAGAAACACAGTAACACCCTaGCGGCAGCGGCCCCACACC +
Preference number: 4 (lower is better)
Translates to: MVEDMTPDRIPHITFIGRNTVTP*RQRPHT
Trigger: GGTGTGGGGCCGCTGCCGCCAGGGTGTTACTGTGTT...TCTACCGATAAATGTGATATGTGGAATTCTGTCTGGAGTCATATCTTCAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR CCA 90 bp ATGCTTCTTGGTGATGTCATAGACCGGCAGCTCCACACCAACAACAATAGCAGCTCATTCCTCCTTGAATaGTGTTGCTTTGCGCTTGCA +
Preference number: 4 (lower is better)
Translates to: MLLGDVIDRQLHTNNNSSSFLLE*CCFALA
Trigger: TGCAAGCGCAAAGCAACACCATTCAAGGAGGAATGA...GCTGCTATTGTTGTTGGTGTGGAGCTGCCGGTCTATGACATCACCAAGAAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR CCA 90 bp AAACGTTTGATGAAGAGCATCCAATGCCAACACACAGCAATCTCAACTAACCCAGCCAGACTGGGAATTTaGCCGCACTACTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KRLMKSIQCQHTAISTNPARLGI*PHYCGR
Trigger: CCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGC...TGGGTTAGTTGAGATTGCTGTGTGTTGGCATTGGATGCTCTTCATCAAACGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp CCTGCAGTCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGTCTCAACAAAGAGACTaGCCAGACTGGGAATTTGGC +
Preference number: 4 (lower is better)
Translates to: PAVLLFSLNKETGQTGNLSQQRD*PDWEFG
Trigger: GCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGA...CAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGACTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp AAACGTTTGATGAAGAGCATCCAATGCCAACACACAGCAATCTCAACTAACCCACAAACGGCTTCCAGTTaGGGGCTGACATTCTCACAC +
Preference number: 4 (lower is better)
Translates to: KRLMKSIQCQHTAISTNPQTASS*GLTFSH
Trigger: GTGTGAGAATGTCAGCCCTCAACTGGAAGCCGTTTG...TGGGTTAGTTGAGATTGCTGTGTGTTGGCATTGGATGCTCTTCATCAAACGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519676.6
CDS-3UTR TCA 90 bp TCTTGTCCCCTCTTGCTGGTAAATGTTCATGAAGTTGCCTATCATTCCTCCTTGGGTAAGTGCCTATCTTaGTGGTGCCATAGGATGCCT +
Preference number: 4 (lower is better)
Translates to: SCPLLLVNVHEVAYHSSLGKCLS*WCHRMP
Trigger: AGGCATCCTATGGCACCATCAAGATAGGCACTTACC...CAAGGAGGAATGATAGGCAACTTCATGAACATTTACCAGCAAGAGGGGACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR TCA 90 bp TCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACCAATGGTTGAAGATATaGCTCCAGACAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: SFYSVSTKRLARLGIWPHQWLKI*LQTEFH
Trigger: GTGGAATTCTGTCTGGAGTCATATCTTCAACCATTG...GTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp AGAGACCCAAATAAATATGTTCCCTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTGGATTAGCAATGGTTaGAGATATGACTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: RDPNKYVPCPVAASQKWKWISNG*RYDSRQ
Trigger: CTGTCTGGAGTCATATCTTCAACCATTGCTAATCCA...CTTCCACTTCTGGGAGGCAGCCACAGGACAGGGAACATATTTATTTGGGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp TCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAGGTAATAATACTGTCTaGCATTCGCTCTTTACATGG +
Preference number: 4 (lower is better)
Translates to: STKRLARLGIWPHYCGRRGNNTV*HSLFTW
Trigger: CCATGTAAAGAGCGAATGTCAGACAGTATTATTACC...TCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp CCTGCAGTCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGCACCAATACAGACCTTaGAACCTTCAAAGCCAACAC +
Preference number: 4 (lower is better)
Translates to: PAVLLFSLNKETGQTGNLHQYRP*NLQSQH
Trigger: GTGTTGGCTTTGAAGGTTGCAAGGTCTGTATTGGTG...CAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGACTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp CCTGCAGTCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGCAAAGGGACCATTCATaGATAAGGAAGGCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: PAVLLFSLNKETGQTGNLQRDHS*IRKARE
Trigger: TTCCCTTGCCTTCCTTATGCATGAATGGTCCCTTTG...CAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGACTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp GTAACAAGCAATCCAGGGTTCCTGTGTAGCCAGAACATCTGCCATCTCGAAGCATGTCTCATGCAGCCTTaGCTTGTCACAAATCCAATT +
Preference number: 4 (lower is better)
Translates to: VTSNPGFLCSQNICHLEACLMQP*LVTNPI
Trigger: AATTGGATTTGTGACAAGCCAAGGCTGCATGAGACA...TGCTTCGAGATGGCAGATGTTCTGGCTACACAGGAACCCTGGATTGCTTGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR CCA 90 bp TTAGCAATGGTTGAAGATATGACTCCAGACAGAATTCCACATATCACATTTATCCAGTGCTGTTTTTCCTaGCGGCAGCGGCCCCACACC +
Preference number: 4 (lower is better)
Translates to: LAMVEDMTPDRIPHITFIQCCFS*RQRPHT
Trigger: GGTGTGGGGCCGCTGCCGCCAGGAAAAACAGCACTG...GATAAATGTGATATGTGGAATTCTGTCTGGAGTCATATCTTCAACCATTGCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463262.1
CDS-3UTR CCA 90 bp TCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACAGAAGTGGAAGTTCTTaGGGTTCTCACAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: SFYSVSTKRLARLGIWPHRSGSS*GSHSHL
Trigger: AAGATGACTGTGAGAACCCCAAGAACTTCCACTTCT...GTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp TCCTCCTTGAATGGTGTTGCTTTGCGCTTGCATCCGAATTTTCAAAACATCAGTGTTGTAACAAGAACCTaGGGCCGCTGGAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SSLNGVALRLHPNFQNISVVTRT*GRWRKG
Trigger: TCCTTTTCTCCAGCGGCCTCAGGTTCTTGTTACAAC...ACTGATGTTTTGAAAATTCGGATGCAAGCGCAAAGCAACACCATTCAAGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR TCA 90 bp AAATCTCCCAGAAATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGCCTATCATTCCTCCTTaGATGGTGTTGCTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: KSPRNSETITPSRRLHSMPIIPP*MVLLCA
Trigger: AGCGCAAAGCAACACCATTCAAGGAGGAATGATAGG...CATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATTTCTGGGAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp TCTTGTCCCCTCTTGCTGGTAAATGTTCATGAAGTTGCCTATCATTCCTCCTTGTCTCGAAGCACTCTCTaGTTCATCATACGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SCPLLLVNVHEVAYHSSLSRSTL*FIIRVL
Trigger: GAGGACACGTATGATGAATCAGAGAGTGCTTCGAGA...CAAGGAGGAATGATAGGCAACTTCATGAACATTTACCAGCAAGAGGGGACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR TCA 90 bp AATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGGTTCCAGTGAGCCATTCACAATTACCATaGGAAGCCCATGAGAACATG +
Preference number: 4 (lower is better)
Translates to: NSETITPSRRLHSMVPVSHSQLP*EAHENM
Trigger: CATGTTCTCATGGGCTTCTCATGGTAATTGTGAATG...GCTCACTGGAACCATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp CCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCTTTTAAAGAAGAGGGAGAATaGCTTATTGTGTCTACAGAA +
Preference number: 4 (lower is better)
Translates to: PVAASQKWKFLGFSQSSFKEEGE*LIVSTE
Trigger: TTCTGTAGACACAATAAGTCATTCTCCCTCTTCTTT...AAAAGATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp TCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACGGTAATAATACTGTCTaGCATTCGCTCTTTACATGG +
Preference number: 4 (lower is better)
Translates to: SFYSVSTKRLARLGIWPHGNNTV*HSLFTW
Trigger: CCATGTAAAGAGCGAATGTCAGACAGTATTATTACC...GTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp GTTGGATTAGCAATGGTTGAAGATATGACTCCAGACAGAATTCCACATATCACAACAATAGCAGCCCTCTaGGCAGTAAGGGACACACCC +
Preference number: 4 (lower is better)
Translates to: VGLAMVEDMTPDRIPHITTIAAL*AVRDTP
Trigger: GGGTGTGTCCCTTACTGCGCAGAGGGCTGCTATTGT...TGTGATATGTGGAATTCTGTCTGGAGTCATATCTTCAACCATTGCTAATCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR GCA 90 bp TCCTCCTTGAATGGTGTTGCTTTGCGCTTGCATCCGAATTTTCAAAACATCAGTAAACATTGCCTCCAGTaGTGTTTTTCCTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SSLNGVALRLHPNFQNISKHCLQ*CFSWRQ
Trigger: CTGCCGCCAGGAAAAACAGCACTGGAGGCAATGTTT...ACTGATGTTTTGAAAATTCGGATGCAAGCGCAAAGCAACACCATTCAAGGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000463262.1
CDS-3UTR GCA 90 bp AATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGGTTCCAGTGAGCATCCTCACTAATGCGTaGAACATTCCTCGGTATCTA +
Preference number: 4 (lower is better)
Translates to: NSETITPSRRLHSMVPVSILTNA*NIPRYL
Trigger: TAGATACCGAGGAATGTTGCACGCATTAGTGAGGAT...GCTCACTGGAACCATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp AGTACCACTATTTCCCAAGATGTCAGGTGGATGAATACGATAAGTGTCTTTGCTCCAATTACGGTCTGTTaGTTCCGTGCCATGTGGGCT +
Preference number: 4 (lower is better)
Translates to: STTISQDVRWMNTISVFAPITVC*FRAMWA
Trigger: AGCCCACATGGCACGGAAGCAACAGACCGTAATTGG...AGCAAAGACACTTATCGTATTCATCCACCTGACATCTTGGGAAATAGTGGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618165.1
CDS-3UTR CCA 90 bp CCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCTTTTAAGTCTCAACCAATTTaGCCAAAAGCCTTTATAGAG +
Preference number: 4 (lower is better)
Translates to: PVAASQKWKFLGFSQSSFKSQPI*PKAFIE
Trigger: CTCTATAAAGGCTTTTGGCCAAATTGGTTGAGACTT...AAAAGATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR TCA 90 bp ACTCCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTTCATCTTCTGGGGTTGTAACAAGAACCTaGGGCCGCTGGAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: TPDRIPHITFIGRVSSSGVVTRT*GRWRKG
Trigger: TCCTTTTCTCCAGCGGCCTCAGGTTCTTGTTACAAC...CCCAGAAGATGAAACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR TCA 90 bp ACTCCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTTCATCTTCTGGGTATTTGCAGCAGCCATaGTGGCTCACGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: TPDRIPHITFIGRVSSSGYLQQP*WLTPVI
Trigger: GATTACAGGCGTGAGCCATCATGGCTGCTGCAAATA...CCCAGAAGATGAAACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR TCA 90 bp ACTCCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTTCATCTTCTGGGCTTCCAGTTGAGGGCTaGCATTCTCACACTGTCTCT +
Preference number: 4 (lower is better)
Translates to: TPDRIPHITFIGRVSSSGLPVEG*HSHTVS
Trigger: AGAGACAGTGTGAGAATGTCAGCCCTCAACTGGAAG...CCCAGAAGATGAAACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR TCA 90 bp TTGAATGGTGTTGCTTTGCGCTTGCATCCGAATTTTCAAAACATCAGTTGGATTCAAACGGCTTCCAGTTaGGGGCTGACATTCTCACAC +
Preference number: 4 (lower is better)
Translates to: LNGVALRLHPNFQNISWIQTASS*GLTFSH
Trigger: GTGTGAGAATGTCAGCCCTCAACTGGAAGCCGTTTG...AATCCAACTGATGTTTTGAAAATTCGGATGCAAGCGCAAAGCAACACCATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR TCA 90 bp TCCTCCTTGAATGGTGTTGCTTTGCGCTTGCATCCGAATTTTCAAAACATCAGTCTTCTGGGCGTTCAATaGATAGTCGCTTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SSLNGVALRLHPNFQNISLLGVQ*IVASSS
Trigger: AGAGCTTGAAGCGACTATTCATTGAACGCCCAGAAG...ACTGATGTTTTGAAAATTCGGATGCAAGCGCAAAGCAACACCATTCAAGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR TCA 90 bp CCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTTCATCTTCTGGGCGTCTTCTGGGCGTTCAATaGATAGTCGCTTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PDRIPHITFIGRVSSSGRLLGVQ*IVASSS
Trigger: AGAGCTTGAAGCGACTATTCATTGAACGCCCAGAAG...ACGCCCAGAAGATGAAACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR TCA 90 bp TCCTCCTTGAATGGTGTTGCTTTGCGCTTGCATCCGAATTTTCAAAACATCAGTCCTATCATTCCTCCTTaGATGGTGTTGCTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: SSLNGVALRLHPNFQNISPIIPP*MVLLCA
Trigger: AGCGCAAAGCAACACCATTCAAGGAGGAATGATAGG...ACTGATGTTTTGAAAATTCGGATGCAAGCGCAAAGCAACACCATTCAAGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR TCA 90 bp TACTGTCTGACATTCGCTCTTTACATGGTCATTAAAATGAATTTGCTTCTACTGACAAGCAGCAAGGCCTaGATGAGCTCTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: YCLTFALYMVIKMNLLLLTSSKA*MSSGVL
Trigger: GAGGACCCCAGAGCTCATTCAGGCCTTGCTGCTTGT...CAGTAGAAGCAAATTCATTTTAATGACCATGTAAAGAGCGAATGTCAGACAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp CCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCTTTTAATTTCCTTAAATTTTaGATCATTCGTCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PVAASQKWKFLGFSQSSFNFLKF*IIRLAL
Trigger: CAAGGCCAGACGAATGATGCAAAATTTAAGGAAATT...AAAAGATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp AATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGGTTCCAGTGAGCTCTGGAGCCGTGTCTTaGTTAAATCAATTGGAAATG +
Preference number: 4 (lower is better)
Translates to: NSETITPSRRLHSMVPVSSGAVS*LNQLEM
Trigger: CATTTCCAATTGATTTAACCAAGACACGGCTCCAGA...GCTCACTGGAACCATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp AAATCTCCCAGAAATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGAAGAAAACCCAAAGGTaGGGAGGTACTTATAGCCAG +
Preference number: 4 (lower is better)
Translates to: KSPRNSETITPSRRLHSMKKTQR*GGTYSQ
Trigger: CTGGCTATAAGTACCTCCCCACCTTTGGGTTTTCTT...CATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATTTCTGGGAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp CAGGTCACAAATAAAGAAGCAATAGTGGTAGAGATATCATTCAGAGTACCACTATGCTTCCGTGCCATGTaGGCTCCTGAACAGGTCACA +
Preference number: 4 (lower is better)
Translates to: QVTNKEAIVVEISFRVPLCFRAM*APEQVT
Trigger: TGTGACCTGTTCAGGAGCCCACATGGCACGGAAGCA...TAGTGGTACTCTGAATGATATCTCTACCACTATTGCTTCTTTATTTGTGACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618165.1
CDS-3UTR TCA 90 bp ACTCCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTTCATCTTCTGGGGTCTCCCATCAGGCCTaGGAGAATAAGATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: TPDRIPHITFIGRVSSSGVSHQA*ENKMLL
Trigger: AAGAAGCATCTTATTCTCTCAGGCCTGATGGGAGAC...CCCAGAAGATGAAACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR GCA 90 bp ACTCCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTTCATCTTCTGGGCTCCTTGAATGGTGTTaGTTTGCGCTTGCATCCGAA +
Preference number: 4 (lower is better)
Translates to: TPDRIPHITFIGRVSSSGLLEWC*FALASE
Trigger: TTCGGATGCAAGCGCAAAGCAACACCATTCAAGGAG...CCCAGAAGATGAAACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR GCA 90 bp AAATCTCCCAGAAATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGATCCTCACTAATGCGTaGAACATTCCTCGGTATCTA +
Preference number: 4 (lower is better)
Translates to: KSPRNSETITPSRRLHSMILTNA*NIPRYL
Trigger: TAGATACCGAGGAATGTTGCACGCATTAGTGAGGAT...CATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATTTCTGGGAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp CCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTTCATCTTCTGGGCGTTCATTCCTCCTTGAATaGTGTTGCTTTGCGCTTGCA +
Preference number: 4 (lower is better)
Translates to: PDRIPHITFIGRVSSSGRSFLLE*CCFALA
Trigger: TGCAAGCGCAAAGCAACACCATTCAAGGAGGAATGA...ACGCCCAGAAGATGAAACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR CCA 90 bp AATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGGTTCCAGTGAGCAAGTCTCAACCAATTTaGCCAAAAGCCTTTATAGAG +
Preference number: 4 (lower is better)
Translates to: NSETITPSRRLHSMVPVSKSQPI*PKAFIE
Trigger: CTCTATAAAGGCTTTTGGCCAAATTGGTTGAGACTT...GCTCACTGGAACCATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR CAA 72 bp GCCTATCATTCCTCCTTGAATGGTGTTGCTTTGCGCTaGCATCCGAATTTTCAAAACATCAGTTGGATTAGC +
Preference number: 4 (lower is better)
Translates to: AYHSSLNGVALR*HPNFQNISWIS
Trigger: GCTAATCCAACTGATGTTTTGAAAATTCGGATGCAAGCGCAAAGCAACACCATTCAAGGAGGAATGATAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310862.11
3UTR CAA 72 bp GAAGTTGCCTATCATTCCTCCTTGAATGGTGTTGCTTaGCGCTTGCATCCGAATTTTCAAAACATCAGTTGG +
Preference number: 4 (lower is better)
Translates to: EVAYHSSLNGVA*RLHPNFQNISW
Trigger: CCAACTGATGTTTTGAAAATTCGGATGCAAGCGCAAAGCAACACCATTCAAGGAGGAATGATAGGCAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR TCA 90 bp TTAGCAATGGTTGAAGATATGACTCCAGACAGAATTCCACATATCACATTTATCCAAACGGCTTCCAGTTaGGGGCTGACATTCTCACAC +
Preference number: 4 (lower is better)
Translates to: LAMVEDMTPDRIPHITFIQTASS*GLTFSH
Trigger: GTGTGAGAATGTCAGCCCTCAACTGGAAGCCGTTTG...GATAAATGTGATATGTGGAATTCTGTCTGGAGTCATATCTTCAACCATTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR TCA 90 bp GTTGAAGATATGACTCCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTGGTAAGTGCCTATCTTaGTGGTGCCATAGGATGCCT +
Preference number: 4 (lower is better)
Translates to: VEDMTPDRIPHITFIGRVGKCLS*WCHRMP
Trigger: AGGCATCCTATGGCACCATCAAGATAGGCACTTACC...AACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGGAGTCATATCTTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR TCA 90 bp AAACGTTTGATGAAGAGCATCCAATGCCAACACACAGCAATCTCAACTAACCCAAGGAGCTACTCTCCCTaGATAAAACAATACATCGCT +
Preference number: 4 (lower is better)
Translates to: KRLMKSIQCQHTAISTNPRSYSP*IKQYIA
Trigger: AGCGATGTATTGTTTTATTCAGGGAGAGTAGCTCCT...TGGGTTAGTTGAGATTGCTGTGTGTTGGCATTGGATGCTCTTCATCAAACGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp AAATCTCCCAGAAATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGTCTGGAGCCGTGTCTTaGTTAAATCAATTGGAAATG +
Preference number: 4 (lower is better)
Translates to: KSPRNSETITPSRRLHSMSGAVS*LNQLEM
Trigger: CATTTCCAATTGATTTAACCAAGACACGGCTCCAGA...CATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATTTCTGGGAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CCA 90 bp TTTATACCTGGGGTTGAACAGTCCAGGTCTCCATACATGAAATTTCTTCAGTTGAAGAAAACCCAAAGGTaGGGAGGTACTTATAGCCAG +
Preference number: 4 (lower is better)
Translates to: FIPGVEQSRSPYMKFLQLKKTQR*GGTYSQ
Trigger: CTGGCTATAAGTACCTCCCCACCTTTGGGTTTTCTT...CAACTGAAGAAATTTCATGTATGGAGACCTGGACTGTTCAACCCCAGGTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR CAA 72 bp CTGGTAAATGTTCATGAAGTTGCCTATCATTCCTCCTaGAATGGTGTTGCTTTGCGCTTGCATCCGAATTTT +
Preference number: 4 (lower is better)
Translates to: LVNVHEVAYHSS*NGVALRLHPNF
Trigger: AAAATTCGGATGCAAGCGCAAAGCAACACCATTCAAGGAGGAATGATAGGCAACTTCATGAACATTTACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR TCA 90 bp ACTCCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTTCATCTTCTGGGTGGATTAGCAATGGTTaGAGATATGACTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: TPDRIPHITFIGRVSSSGWISNG*RYDSRQ
Trigger: CTGTCTGGAGTCATATCTTCAACCATTGCTAATCCA...CCCAGAAGATGAAACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR TCA 90 bp CAGGTCACAAATAAAGAAGCAATAGTGGTAGAGATATCATTCAGAGTACCACTATCTCGAAGCACTCTCTaGTTCATCATACGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: QVTNKEAIVVEISFRVPLSRSTL*FIIRVL
Trigger: GAGGACACGTATGATGAATCAGAGAGTGCTTCGAGA...TAGTGGTACTCTGAATGATATCTCTACCACTATTGCTTCTTTATTTGTGACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618165.1
CDS-3UTR TCA 90 bp AAATCTCCCAGAAATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGAAAGAAGAGGGAGAATaGCTTATTGTGTCTACAGAA +
Preference number: 4 (lower is better)
Translates to: KSPRNSETITPSRRLHSMKEEGE*LIVSTE
Trigger: TTCTGTAGACACAATAAGTCATTCTCCCTCTTCTTT...CATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATTTCTGGGAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp ATGACTCCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTTCATCTTCTTGTAGCCAGAACATCTaGCATCTCGAAGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: MTPDRIPHITFIGRVSSSCSQNI*HLEALS
Trigger: AGAGAGTGCTTCGAGATGGCAGATGTTCTGGCTACA...AGAAGATGAAACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGGAGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR CCA 90 bp TCTTGTCCCCTCTTGCTGGTAAATGTTCATGAAGTTGCCTATCATTCCTCCTTGAAGTCTCAACCAATTTaGCCAAAAGCCTTTATAGAG +
Preference number: 4 (lower is better)
Translates to: SCPLLLVNVHEVAYHSSLKSQPI*PKAFIE
Trigger: CTCTATAAAGGCTTTTGGCCAAATTGGTTGAGACTT...CAAGGAGGAATGATAGGCAACTTCATGAACATTTACCAGCAAGAGGGGACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR TCA 90 bp ACATCAGTTGGATTAGCAATGGTTGAAGATATGACTCCAGACAGAATTCCACATCAATGGTTGAAGATATaGCTCCAGACAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: TSVGLAMVEDMTPDRIPHQWLKI*LQTEFH
Trigger: GTGGAATTCTGTCTGGAGTCATATCTTCAACCATTG...ATGTGGAATTCTGTCTGGAGTCATATCTTCAACCATTGCTAATCCAACTGATGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR CCA 90 bp CCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTTCATCTTCTGGGCGTAGTGCTGTTTTTCCTTaGTATGCGTGTATGTATTCA +
Preference number: 4 (lower is better)
Translates to: PDRIPHITFIGRVSSSGRSAVFP*YACMYS
Trigger: TGAATACATACACGCATACCAAGGAAAAACAGCACT...ACGCCCAGAAGATGAAACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR TCA 90 bp GTTGAAGATATGACTCCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTCAATGGTTGAAGATATaGCTCCAGACAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: VEDMTPDRIPHITFIGRVQWLKI*LQTEFH
Trigger: GTGGAATTCTGTCTGGAGTCATATCTTCAACCATTG...AACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGGAGTCATATCTTCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR GCA 90 bp TTGAATGGTGTTGCTTTGCGCTTGCATCCGAATTTTCAAAACATCAGTTGGATTGTGTTGCTTTGCGCTTaGATCCGAATTTTCAAAACA +
Preference number: 4 (lower is better)
Translates to: LNGVALRLHPNFQNISWIVLLCA*IRIFKT
Trigger: TGTTTTGAAAATTCGGATGCAAGCGCAAAGCAACAC...AATCCAACTGATGTTTTGAAAATTCGGATGCAAGCGCAAAGCAACACCATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR GCA 90 bp TACCACTATTTCCCAAGATGTCAGGTGGATGAATACGATAAGTGTCTTTGCTTCTACGATAAGTGTCTTTaGTTCATTAAGGCAACACCT +
Preference number: 4 (lower is better)
Translates to: YHYFPRCQVDEYDKCLCFYDKCL*FIKATP
Trigger: AGGTGTTGCCTTAATGAAGCAAAGACACTTATCGTA...GAAGCAAAGACACTTATCGTATTCATCCACCTGACATCTTGGGAAATAGTGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618165.1
CDS-3UTR CCA 90 bp ACATCAGTTGGATTAGCAATGGTTGAAGATATGACTCCAGACAGAATTCCACATGCGGAAGCTGTTCTCTaGGAAGTCTATTTTATCTTA +
Preference number: 4 (lower is better)
Translates to: TSVGLAMVEDMTPDRIPHAEAVL*EVYFIL
Trigger: TAAGATAAAATAGACTTCCCAGAGAACAGCTTCCGC...ATGTGGAATTCTGTCTGGAGTCATATCTTCAACCATTGCTAATCCAACTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR TCA 90 bp TTAGCAATGGTTGAAGATATGACTCCAGACAGAATTCCACATATCACATTTATCTGGATTAGCAATGGTTaGAGATATGACTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: LAMVEDMTPDRIPHITFIWISNG*RYDSRQ
Trigger: CTGTCTGGAGTCATATCTTCAACCATTGCTAATCCA...GATAAATGTGATATGTGGAATTCTGTCTGGAGTCATATCTTCAACCATTGCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR TCA 90 bp TACTGTCTGACATTCGCTCTTTACATGGTCATTAAAATGAATTTGCTTCTACTGAGGAGCTACTCTCCCTaGATAAAACAATACATCGCT +
Preference number: 4 (lower is better)
Translates to: YCLTFALYMVIKMNLLLLRSYSP*IKQYIA
Trigger: AGCGATGTATTGTTTTATTCAGGGAGAGTAGCTCCT...CAGTAGAAGCAAATTCATTTTAATGACCATGTAAAGAGCGAATGTCAGACAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR GCA 90 bp ATGACTCCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTTCATCTTCTGTGTTGCTTTGCGCTTaGATCCGAATTTTCAAAACA +
Preference number: 4 (lower is better)
Translates to: MTPDRIPHITFIGRVSSSVLLCA*IRIFKT
Trigger: TGTTTTGAAAATTCGGATGCAAGCGCAAAGCAACAC...AGAAGATGAAACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGGAGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR CCA 90 bp TACTGTCTGACATTCGCTCTTTACATGGTCATTAAAATGAATTTGCTTCTACTGTGTCTCATGCAGCCTTaGCTTGTCACAAATCCAATT +
Preference number: 4 (lower is better)
Translates to: YCLTFALYMVIKMNLLLLCLMQP*LVTNPI
Trigger: AATTGGATTTGTGACAAGCCAAGGCTGCATGAGACA...CAGTAGAAGCAAATTCATTTTAATGACCATGTAAAGAGCGAATGTCAGACAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
3UTR CAA 72 bp AGCAAGAAACATGCATTTCACATATTATCTTTGATGTaGAAGGGCACTTCAGTGGTAAAGACTAGTGTTTGG +
Preference number: 4 (lower is better)
Translates to: SKKHAFHILSLM*KGTSVVKTSVW
Trigger: CCAAACACTAGTCTTTACCACTGAAGTGCCCTTCAACATCAAAGATAATATGTGAAATGCATGTTTCTTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp CTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCTGCTGCCCTCTAGGGTaGCCCAGGGAGAGCTGGACT +
Preference number: 5 (lower is better)
Translates to: LSCGCLPEVEVLGVLTVICCPLG*PRESWT
Trigger: AGTCCAGCTCTCCCTGGGCAACCCTAGAGGGCAGCA...GATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp AAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCTGCTGCCCTCTAGGGTaGCCCAGGGAGAGCTGGACT +
Preference number: 5 (lower is better)
Translates to: KETGQTGNLAALLWKENACCPLG*PRESWT
Trigger: AGTCCAGCTCTCCCTGGGCAACCCTAGAGGGCAGCA...GGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp AAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCAACATCAACAGGGTTaGAGGCCAGGGCCCCTGCCA +
Preference number: 5 (lower is better)
Translates to: KETGQTGNLAALLWKENAQHQQG*RPGPLP
Trigger: TGGCAGGGGCCCTGGCCTCAAACCCTGTTGATGTTG...GGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCCGTTTATACCTGGGGTaGAACAGTCCAGGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSRLYLG*NSPGLH
Trigger: ATGGAGACCTGGACTGTTCAACCCCAGGTATAAACG...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp CTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCCCTTCCACAGTCCTCTaGTCCCCTCTTGCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: LSCGCLPEVEVLGVLTVIPSTVL*SPLAGK
Trigger: TTTACCAGCAAGAGGGGACAAGAGGACTGTGGAAGG...GATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp TGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTAACATCATTCGTCTGGCCTaGAATCTGGAGCCGTGTCTT +
Preference number: 5 (lower is better)
Translates to: WEFGRTTVEGECPGAPANIIRLA*NLEPCL
Trigger: AAGACACGGCTCCAGATTCAAGGCCAGACGAATGAT...GTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCATGTCTCATGCAGCCTaGGCTTGTCACAAATCCAAT +
Preference number: 5 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSMSHAA*ACHKSN
Trigger: ATTGGATTTGTGACAAGCCAAGGCTGCATGAGACAT...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp CTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCCCCAGTCTTCATCTGTaGCTCACATCCCAGAATCTG +
Preference number: 5 (lower is better)
Translates to: LSCGCLPEVEVLGVLTVIPSLHL*LTSQNL
Trigger: CAGATTCTGGGATGTGAGCAACAGATGAAGACTGGG...GATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp TGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTAACCCACCAATACAGACCTaGCAACCTTCAAAGCCAACA +
Preference number: 5 (lower is better)
Translates to: WEFGRTTVEGECPGAPANPPIQT*QPSKPT
Trigger: TGTTGGCTTTGAAGGTTGCAAGGTCTGTATTGGTGG...GTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp AGAGACCCAAATAAATATGTTCCCTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGGGCCAGACTGGGAATTaGGCCGCACTACTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: RDPNKYVPCPVAASQKWKGQTGN*AALLWK
Trigger: CTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCC...CTTCCACTTCTGGGAGGCAGCCACAGGACAGGGAACATATTTATTTGGGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTTGAATGGTGTTGCTTaGCGCTTGCATCCGAATTTT +
Preference number: 5 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSLNGVA*RLHPNF
Trigger: AAAATTCGGATGCAAGCGCAAAGCAACACCATTCAA...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp CCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCTTTTCCTTCCACAGTCCTCTaGTCCCCTCTTGCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: PVAASQKWKFLGFSQSSFPSTVL*SPLAGK
Trigger: TTTACCAGCAAGAGGGGACAAGAGGACTGTGGAAGG...AAAAGATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS GCA 90 bp TTCCTTTCCTGCCTCCCACTGTGGCACATAGGAAGCGTGCTGGCCTaGCAAACAATTCCGGAGCTAATTCCTGTTTATCTTCAGGCACTT +
Preference number: 5 (lower is better)
Translates to: FLSCLPLWHIGSVLA*QTIPELIPVYLQAL
Trigger: AAGTGCCTGAAGATAAACAGGAATTAGCTCCGGAATTGTTTGGCAGGCCAGCACGCTTCCTATGTGCCACAGTGGGAGGCAGGAAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS-3UTR CAA 90 bp CCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCTTTTACAAACGGCTTCCAGTaGAGGGCTGACATTCTCACA +
Preference number: 5 (lower is better)
Translates to: PVAASQKWKFLGFSQSSFTNGFQ*RADILT
Trigger: TGTGAGAATGTCAGCCCTCAACTGGAAGCCGTTTGT...AAAAGATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519676.6
CDS-3UTR CAA 90 bp TGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTAACTTGAATGGTGTTGCTTaGCGCTTGCATCCGAATTTT +
Preference number: 5 (lower is better)
Translates to: WEFGRTTVEGECPGAPANLNGVA*RLHPNF
Trigger: AAAATTCGGATGCAAGCGCAAAGCAACACCATTCAA...GTTAGCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp CCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCTTTTGCCTATCATTCCTCCTaGAATGGTGTTGCTTTGCGC +
Preference number: 5 (lower is better)
Translates to: PVAASQKWKFLGFSQSSFAYHSS*NGVALR
Trigger: GCGCAAAGCAACACCATTCAAGGAGGAATGATAGGC...AAAAGATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp TCTTGTCCCCTCTTGCTGGTAAATGTTCATGAAGTTGCCTATCATTCCTCCTTGCAACATCAACAGGGTTaGAGGCCAGGGCCCCTGCCA +
Preference number: 5 (lower is better)
Translates to: SCPLLLVNVHEVAYHSSLQHQQG*RPGPLP
Trigger: TGGCAGGGGCCCTGGCCTCAAACCCTGTTGATGTTG...CAAGGAGGAATGATAGGCAACTTCATGAACATTTACCAGCAAGAGGGGACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR CAA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCCAAGTCTCAACCAATTaGGCCAAAAGCCTTTATAGA +
Preference number: 5 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSQVSTN*AKSLYR
Trigger: TCTATAAAGGCTTTTGGCCAAATTGGTTGAGACTTG...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp AGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCTGGAGCCCCAGCTATGCCATTAAACGTTaGATGAAGAGCATCCAATGC +
Preference number: 5 (lower is better)
Translates to: RLGIWPHYCGRRMPWSPSYAIKR*MKSIQC
Trigger: GCATTGGATGCTCTTCATCAAACGTTTAATGGCATA...GCTGGGGCTCCAGGGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp AAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCCAGAAGTGGAAGTTCTaGGGGTTCTCACAGTCATCT +
Preference number: 5 (lower is better)
Translates to: KETGQTGNLAALLWKENAQKWKF*GFSQSS
Trigger: AGATGACTGTGAGAACCCCAAGAACTTCCACTTCTG...GGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS CCA 90 bp GAAGGACTGCCTAAGAAATCTTTGCTCTTTAGAGGCTTGTGTGGGTaGAAGACTAAGGCTCCATGCCCAACAACCCCACACGAAGGATTG +
Preference number: 5 (lower is better)
Translates to: EGLPKKSLLFRGLCG*KTKAPCPTTPHEGL
Trigger: CAATCCTTCGTGTGGGGTTGTTGGGCATGGAGCCTTAGTCTTCCACCCACACAAGCCTCTAAAGAGCAAAGATTTCTTAGGCAGTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS-3UTR CAA 90 bp AAACGTTTGATGAAGAGCATCCAATGCCAACACACAGCAATCTCAACTAACCCACAACATCAACAGGGTTaGAGGCCAGGGCCCCTGCCA +
Preference number: 5 (lower is better)
Translates to: KRLMKSIQCQHTAISTNPQHQQG*RPGPLP
Trigger: TGGCAGGGGCCCTGGCCTCAAACCCTGTTGATGTTG...TGGGTTAGTTGAGATTGCTGTGTGTTGGCATTGGATGCTCTTCATCAAACGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp GAGTACCACTATTTCCCAAGATGTCAGGTGGATGAATACGATAAGTGTCTTTGCCAACATCAACAGGGTTaGAGGCCAGGGCCCCTGCCA +
Preference number: 5 (lower is better)
Translates to: EYHYFPRCQVDEYDKCLCQHQQG*RPGPLP
Trigger: TGGCAGGGGCCCTGGCCTCAAACCCTGTTGATGTTG...GCAAAGACACTTATCGTATTCATCCACCTGACATCTTGGGAAATAGTGGTACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618165.1
CDS-3UTR CAA 90 bp CTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCTCATGCAGCCTTGGCTaGTCACAAATCCAATTTCTT +
Preference number: 5 (lower is better)
Translates to: LSCGCLPEVEVLGVLTVISCSLG*SQIQFL
Trigger: AAGAAATTGGATTTGTGACAAGCCAAGGCTGCATGA...GATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp AGAGACCCAAATAAATATGTTCCCTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGATCATTCGTCTGGCCTaGAATCTGGAGCCGTGTCTT +
Preference number: 5 (lower is better)
Translates to: RDPNKYVPCPVAASQKWKIIRLA*NLEPCL
Trigger: AAGACACGGCTCCAGATTCAAGGCCAGACGAATGAT...CTTCCACTTCTGGGAGGCAGCCACAGGACAGGGAACATATTTATTTGGGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS GCA 90 bp TCTTTGCTCTTTAGAGGCTTGTGTGGGTGGAAGACTAAGGCTCCATaGCCAACAACCCCACACGAAGGATTGAATGAACTCCACACAAAG +
Preference number: 5 (lower is better)
Translates to: SLLFRGLCGWKTKAP*PTTPHEGLNELHTK
Trigger: CTTTGTGTGGAGTTCATTCAATCCTTCGTGTGGGGTTGTTGGGCATGGAGCCTTAGTCTTCCACCCACACAAGCCTCTAAAGAGCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS-3UTR CAA 90 bp AATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGGTTCCAGTGAGCGCCTATCATTCCTCCTaGAATGGTGTTGCTTTGCGC +
Preference number: 5 (lower is better)
Translates to: NSETITPSRRLHSMVPVSAYHSS*NGVALR
Trigger: GCGCAAAGCAACACCATTCAAGGAGGAATGATAGGC...GCTCACTGGAACCATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp TTCCAATTACGGTCTGTTGCTTCCGTGCCATGTGGGCTCCTGAACAGGTCACAATCCTCTTGTCCCCTCTaGCTGGTAAATGTTCATGAA +
Preference number: 5 (lower is better)
Translates to: FQLRSVASVPCGLLNRSQSSCPL*LVNVHE
Trigger: TTCATGAACATTTACCAGCAAGAGGGGACAAGAGGA...TTGTGACCTGTTCAGGAGCCCACATGGCACGGAAGCAACAGACCGTAATTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618165.1
CDS-3UTR CAA 90 bp CTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCAGGGAGAATGACTTATaGTGTCTACAGAAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: LSCGCLPEVEVLGVLTVIRENDL*CLQKER
Trigger: TCTTTCCTTCTGTAGACACAATAAGTCATTCTCCCT...GATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp TCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACCAGAAGTGGAAGTTCTaGGGGTTCTCACAGTCATCT +
Preference number: 5 (lower is better)
Translates to: SFYSVSTKRLARLGIWPHQKWKF*GFSQSS
Trigger: AGATGACTGTGAGAACCCCAAGAACTTCCACTTCTG...GTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS GCA 90 bp ACACCTGTAACAAGCAATCCAGGGTTCCTGTGTAGCCAGAACATCTaGCATCTCGAAGCACTCTCTGATTCATCATACGTGTCCTCACAA +
Preference number: 5 (lower is better)
Translates to: TPVTSNPGFLCSQNI*HLEALSDSSYVSSQ
Trigger: TTGTGAGGACACGTATGATGAATCAGAGAGTGCTTCGAGATGGCAGATGTTCTGGCTACACAGGAACCCTGGATTGCTTGTTACAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618165.1
CDS-3UTR CAA 90 bp AGAGACCCAAATAAATATGTTCCCTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTCCTCTTGTCCCCTCTaGCTGGTAAATGTTCATGAA +
Preference number: 5 (lower is better)
Translates to: RDPNKYVPCPVAASQKWKSSCPL*LVNVHE
Trigger: TTCATGAACATTTACCAGCAAGAGGGGACAAGAGGA...CTTCCACTTCTGGGAGGCAGCCACAGGACAGGGAACATATTTATTTGGGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp ATGCTTCTTGGTGATGTCATAGACCGGCAGCTCCACACCAACAACAATAGCAGCATGTCTCATGCAGCCTaGGCTTGTCACAAATCCAAT +
Preference number: 5 (lower is better)
Translates to: MLLGDVIDRQLHTNNNSSMSHAA*ACHKSN
Trigger: ATTGGATTTGTGACAAGCCAAGGCTGCATGAGACAT...GCTGCTATTGTTGTTGGTGTGGAGCTGCCGGTCTATGACATCACCAAGAAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR CAA 90 bp AAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCATCTGGAGCCGTGTCTaGGTTAAATCAATTGGAAAT +
Preference number: 5 (lower is better)
Translates to: KETGQTGNLAALLWKENAIWSRV*VKSIGN
Trigger: ATTTCCAATTGATTTAACCAAGACACGGCTCCAGAT...GGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp CTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTTCTTGGGGTTCTCACAGTCATCATATTATCTTTGATGTaGAAGGGCACTTCAGTGGTA +
Preference number: 5 (lower is better)
Translates to: LSCGCLPEVEVLGVLTVIILSLM*KGTSVV
Trigger: TACCACTGAAGTGCCCTTCAACATCAAAGATAATAT...GATGACTGTGAGAACCCCAAGAACTTCCACTTCTGGGAGGCAGCCACAGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp AAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTACTGTGGAAGGAGAATGCCAGGGAGAATGACTTATaGTGTCTACAGAAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: KETGQTGNLAALLWKENARENDL*CLQKER
Trigger: TCTTTCCTTCTGTAGACACAATAAGTCATTCTCCCT...GGCATTCTCCTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS GCA 90 bp TTACCTGTAACAAGCAATCCAGGGTTCCTGTGTAGCCAGAACATCTaGCATCTCGAAGCACTCTCTGATTCATCATACGTGTCCTCACAA +
Preference number: 5 (lower is better)
Translates to: LPVTSNPGFLCSQNI*HLEALSDSSYVSSQ
Trigger: TTGTGAGGACACGTATGATGAATCAGAGAGTGCTTCGAGATGGCAGATGTTCTGGCTACACAGGAACCCTGGATTGCTTGTTACAGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS CCA 90 bp GGGGTTCCACCCTTAACCACATCAAACTATCTTCCAAGGTCAGCTTaGAGCAGAAAGATCACAGCTGAGATATGTAAATCCCCTGGTATC +
Preference number: 5 (lower is better)
Translates to: GVPPLTTSNYLPRSA*SRKITAEICKSPGI
Trigger: GATACCAGGGGATTTACATATCTCAGCTGTGATCTTTCTGCTCCAAGCTGACCTTGGAAGATAGTTTGATGTGGTTAAGGGTGGAACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS-3UTR CAA 90 bp GTAACAAGCAATCCAGGGTTCCTGTGTAGCCAGAACATCTGCCATCTCGAAGCACAGTGCTGTTTTTCCTaGGTATGCGTGTATGTATTC +
Preference number: 5 (lower is better)
Translates to: VTSNPGFLCSQNICHLEAQCCFS*VCVYVF
Trigger: GAATACATACACGCATACCAAGGAAAAACAGCACTG...TGCTTCGAGATGGCAGATGTTCTGGCTACACAGGAACCCTGGATTGCTTGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR CAA 90 bp CCTGCAGTCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGGTGTTGCTTTGCGCTaGCATCCGAATTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: PAVLLFSLNKETGQTGNLGVALR*HPNFQN
Trigger: GTTTTGAAAATTCGGATGCAAGCGCAAAGCAACACC...CAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGACTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp ATGCTTCTTGGTGATGTCATAGACCGGCAGCTCCACACCAACAACAATAGCAGCTCATGCAGCCTTGGCTaGTCACAAATCCAATTTCTT +
Preference number: 5 (lower is better)
Translates to: MLLGDVIDRQLHTNNNSSSCSLG*SQIQFL
Trigger: AAGAAATTGGATTTGTGACAAGCCAAGGCTGCATGA...GCTGCTATTGTTGTTGGTGTGGAGCTGCCGGTCTATGACATCACCAAGAAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR CAA 90 bp TCCTTCTATTCAGTCTCAACAAAGAGACTGGCCAGACTGGGAATTTGGCCGCACTCATGCAGCCTTGGCTaGTCACAAATCCAATTTCTT +
Preference number: 5 (lower is better)
Translates to: SFYSVSTKRLARLGIWPHSCSLG*SQIQFL
Trigger: AAGAAATTGGATTTGTGACAAGCCAAGGCTGCATGA...GTGCGGCCAAATTCCCAGTCTGGCCAGTCTCTTTGTTGAGACTGAATAGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp AGAGACCCAAATAAATATGTTCCCTGTCCTGTGGCTGCCTCCCAGAAGTGGAAGTCTTGGTTAAATCAATaGGAAATGTACCTGGCGGCA +
Preference number: 5 (lower is better)
Translates to: RDPNKYVPCPVAASQKWKSWLNQ*EMYLAA
Trigger: TGCCGCCAGGTACATTTCCAATTGATTTAACCAAGA...CTTCCACTTCTGGGAGGCAGCCACAGGACAGGGAACATATTTATTTGGGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539591.5
CDS-3UTR CAA 90 bp TACCACTATTTCCCAAGATGTCAGGTGGATGAATACGATAAGTGTCTTTGCTTCTCCAATTACGGTCTGTaGCTTCCGTGCCATGTGGGC +
Preference number: 5 (lower is better)
Translates to: YHYFPRCQVDEYDKCLCFSNYGL*LPCHVG
Trigger: GCCCACATGGCACGGAAGCAACAGACCGTAATTGGA...GAAGCAAAGACACTTATCGTATTCATCCACCTGACATCTTGGGAAATAGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618165.1
CDS TCA 90 bp AAGATCACAGCTGAGATATGTAAATCCCCTGGTATCAGCCTCTTCTaGGATGGCATCTACGCTGATAAGCTTTTGTGGCTTTGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: KITAEICKSPGISLF*DGIYADKLLWLCCG
Trigger: ACCACAGCAAAGCCACAAAAGCTTATCAGCGTAGATGCCATCTCAGAAGAGGCTGATACCAGGGGATTTACATATCTCAGCTGTGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS-3UTR CAA 90 bp CCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTTCATCTTCTGGGCGTGCCTATCATTCCTCCTaGAATGGTGTTGCTTTGCGC +
Preference number: 5 (lower is better)
Translates to: PDRIPHITFIGRVSSSGRAYHSS*NGVALR
Trigger: GCGCAAAGCAACACCATTCAAGGAGGAATGATAGGC...ACGCCCAGAAGATGAAACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR CAA 90 bp TACCACTATTTCCCAAGATGTCAGGTGGATGAATACGATAAGTGTCTTTGCTTCCCTTCCACAGTCCTCTaGTCCCCTCTTGCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: YHYFPRCQVDEYDKCLCFPSTVL*SPLAGK
Trigger: TTTACCAGCAAGAGGGGACAAGAGGACTGTGGAAGG...GAAGCAAAGACACTTATCGTATTCATCCACCTGACATCTTGGGAAATAGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618165.1
CDS-3UTR CAA 90 bp AAACGTTTGATGAAGAGCATCCAATGCCAACACACAGCAATCTCAACTAACCCACCCAGTCTTCATCTGTaGCTCACATCCCAGAATCTG +
Preference number: 5 (lower is better)
Translates to: KRLMKSIQCQHTAISTNPPSLHL*LTSQNL
Trigger: CAGATTCTGGGATGTGAGCAACAGATGAAGACTGGG...TGGGTTAGTTGAGATTGCTGTGTGTTGGCATTGGATGCTCTTCATCAAACGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp ACATTTATCGGTAGAGTTTCATCTTCTGGGCGTTCAATGAATAGTCGCTTCAAGACAAACGGCTTCCAGTaGAGGGCTGACATTCTCACA +
Preference number: 5 (lower is better)
Translates to: TFIGRVSSSGRSMNSRFKTNGFQ*RADILT
Trigger: TGTGAGAATGTCAGCCCTCAACTGGAAGCCGTTTGT...CTTGAAGCGACTATTCATTGAACGCCCAGAAGATGAAACTCTACCGATAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR CAA 90 bp AATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGGTTCCAGTGAGCTATGCCATTAAACGTTaGATGAAGAGCATCCAATGC +
Preference number: 5 (lower is better)
Translates to: NSETITPSRRLHSMVPVSYAIKR*MKSIQC
Trigger: GCATTGGATGCTCTTCATCAAACGTTTAATGGCATA...GCTCACTGGAACCATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp TTTATACCTGGGGTTGAACAGTCCAGGTCTCCATACATGAAATTTCTTCAGTTGCGTTTATACCTGGGGTaGAACAGTCCAGGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: FIPGVEQSRSPYMKFLQLRLYLG*NSPGLH
Trigger: ATGGAGACCTGGACTGTTCAACCCCAGGTATAAACG...CAACTGAAGAAATTTCATGTATGGAGACCTGGACTGTTCAACCCCAGGTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp TACTGTCTGACATTCGCTCTTTACATGGTCATTAAAATGAATTTGCTTCTACTGGGCCAGACTGGGAATTaGGCCGCACTACTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: YCLTFALYMVIKMNLLLLGQTGN*AALLWK
Trigger: CTTCCACAGTAGTGCGGCCAAATTCCCAGTCTGGCC...CAGTAGAAGCAAATTCATTTTAATGACCATGTAAAGAGCGAATGTCAGACAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp ATGGTTGAAGATATGACTCCAGACAGAATTCCACATATCACATTTATCGGTAGACCTTCCACAGTCCTCTaGTCCCCTCTTGCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: MVEDMTPDRIPHITFIGRPSTVL*SPLAGK
Trigger: TTTACCAGCAAGAGGGGACAAGAGGACTGTGGAAGG...TCTACCGATAAATGTGATATGTGGAATTCTGTCTGGAGTCATATCTTCAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR CAA 90 bp AATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGGTTCCAGTGAGCAACATGTATTTAATGTaGTTCTCAAAGGGGGAACTG +
Preference number: 5 (lower is better)
Translates to: NSETITPSRRLHSMVPVSNMYLM*FSKGEL
Trigger: CAGTTCCCCCTTTGAGAACAACATTAAATACATGTT...GCTCACTGGAACCATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS GCA 90 bp ATGTCTCATGCAGCCTTGGCTTGTCACAAATCCAATTTCTTCAACTaGTCGTATGTCACAAAGAACTGTGGTTATGGGTTAAGGATGACA +
Preference number: 5 (lower is better)
Translates to: MSHAALACHKSNFFN*SYVTKNCGYGLRMT
Trigger: TGTCATCCTTAACCCATAACCACAGTTCTTTGTGACATACGAGCAGTTGAAGAAATTGGATTTGTGACAAGCCAAGGCTGCATGAGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS-3UTR CAA 90 bp ACATTTATCGGTAGAGTTTCATCTTCTGGGCGTTCAATGAATAGTCGCTTCAAGGCCAAGGTAGGAGAATaGTTTCAACCCAGGATTTCA +
Preference number: 5 (lower is better)
Translates to: TFIGRVSSSGRSMNSRFKAKVGE*FQPRIS
Trigger: TGAAATCCTGGGTTGAAACAATTCTCCTACCTTGGC...CTTGAAGCGACTATTCATTGAACGCCCAGAAGATGAAACTCTACCGATAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS-3UTR CAA 90 bp GTTGAAGATATGACTCCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTACAAACGGCTTCCAGTaGAGGGCTGACATTCTCACA +
Preference number: 5 (lower is better)
Translates to: VEDMTPDRIPHITFIGRVTNGFQ*RADILT
Trigger: TGTGAGAATGTCAGCCCTCAACTGGAAGCCGTTTGT...AACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGGAGTCATATCTTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR CAA 90 bp ACATTTATCGGTAGAGTTTCATCTTCTGGGCGTTCAATGAATAGTCGCTTCAAGGGTGTTGCTTTGCGCTaGCATCCGAATTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: TFIGRVSSSGRSMNSRFKGVALR*HPNFQN
Trigger: GTTTTGAAAATTCGGATGCAAGCGCAAAGCAACACC...CTTGAAGCGACTATTCATTGAACGCCCAGAAGATGAAACTCTACCGATAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR CAA 90 bp TTTATACCTGGGGTTGAACAGTCCAGGTCTCCATACATGAAATTTCTTCAGTTGTCCTCTTGTCCCCTCTaGCTGGTAAATGTTCATGAA +
Preference number: 5 (lower is better)
Translates to: FIPGVEQSRSPYMKFLQLSSCPL*LVNVHE
Trigger: TTCATGAACATTTACCAGCAAGAGGGGACAAGAGGA...CAACTGAAGAAATTTCATGTATGGAGACCTGGACTGTTCAACCCCAGGTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp AAATCTCCCAGAAATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGCAAGTCTCAACCAATTaGGCCAAAAGCCTTTATAGA +
Preference number: 5 (lower is better)
Translates to: KSPRNSETITPSRRLHSMQVSTN*AKSLYR
Trigger: TCTATAAAGGCTTTTGGCCAAATTGGTTGAGACTTG...CATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATTTCTGGGAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp TTTATACCTGGGGTTGAACAGTCCAGGTCTCCATACATGAAATTTCTTCAGTTGATGTCTCATGCAGCCTaGGCTTGTCACAAATCCAAT +
Preference number: 5 (lower is better)
Translates to: FIPGVEQSRSPYMKFLQLMSHAA*ACHKSN
Trigger: ATTGGATTTGTGACAAGCCAAGGCTGCATGAGACAT...CAACTGAAGAAATTTCATGTATGGAGACCTGGACTGTTCAACCCCAGGTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS-3UTR CAA 90 bp AAATCTCCCAGAAATTCAGAAACCATAACACCTTCTCGGAGGCTCCATTCCATGATCTGGAGCCGTGTCTaGGTTAAATCAATTGGAAAT +
Preference number: 5 (lower is better)
Translates to: KSPRNSETITPSRRLHSMIWSRV*VKSIGN
Trigger: ATTTCCAATTGATTTAACCAAGACACGGCTCCAGAT...CATGGAATGGAGCCTCCGAGAAGGTGTTATGGTTTCTGAATTTCTGGGAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS TCA 90 bp CCTCGGTATCTAATTTCCTTAAATTTTGCATCATTCGTCTGGCCTTaGATCTGGAGCCGTGTCTTGGTTAAATCAATTGGAAATGTACCG +
Preference number: 5 (lower is better)
Translates to: PRYLISLNFASFVWP*IWSRVLVKSIGNVP
Trigger: CGGTACATTTCCAATTGATTTAACCAAGACACGGCTCCAGATTCAAGGCCAGACGAATGATGCAAAATTTAAGGAAATTAGATACCGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519676.6
CDS CCA 90 bp ATCCAATTTCTTCAACTGCTCGTATGTCACAAAGAACTGTGGTTATaGGTTAAGGATGACACAGAAAATGCCATCTTCACAACTCCAGTG +
Preference number: 5 (lower is better)
Translates to: IQFLQLLVCHKELWL*VKDDTENAIFTTPV
Trigger: CACTGGAGTTGTGAAGATGGCATTTTCTGTGTCATCCTTAACCCATAACCACAGTTCTTTGTGACATACGAGCAGTTGAAGAAATTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS-3UTR CAA 90 bp GTTGGATTAGCAATGGTTGAAGATATGACTCCAGACAGAATTCCACATATCACAGGTGTTGCTTTGCGCTaGCATCCGAATTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: VGLAMVEDMTPDRIPHITGVALR*HPNFQN
Trigger: GTTTTGAAAATTCGGATGCAAGCGCAAAGCAACACC...TGTGATATGTGGAATTCTGTCTGGAGTCATATCTTCAACCATTGCTAATCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR CAA 90 bp ACTCCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTTCATCTTCTGGGTTGAATGGTGTTGCTTaGCGCTTGCATCCGAATTTT +
Preference number: 5 (lower is better)
Translates to: TPDRIPHITFIGRVSSSGLNGVA*RLHPNF
Trigger: AAAATTCGGATGCAAGCGCAAAGCAACACCATTCAA...CCCAGAAGATGAAACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR CAA 90 bp AAACGTTTGATGAAGAGCATCCAATGCCAACACACAGCAATCTCAACTAACCCATCTTGGTTAAATCAATaGGAAATGTACCGCACTCAG +
Preference number: 5 (lower is better)
Translates to: KRLMKSIQCQHTAISTNPSWLNQ*EMYRTQ
Trigger: CTGAGTGCGGTACATTTCCAATTGATTTAACCAAGA...TGGGTTAGTTGAGATTGCTGTGTGTTGGCATTGGATGCTCTTCATCAAACGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519676.6
CDS TCA 90 bp CCTCGGTATCTAATTTCCTTAAATTTTGCATCATTCGTCTGGCCTTaGATCTGGAGCCGTGTCTTGGTTAAATCAATTGGAAATGTACCT +
Preference number: 5 (lower is better)
Translates to: PRYLISLNFASFVWP*IWSRVLVKSIGNVP
Trigger: AGGTACATTTCCAATTGATTTAACCAAGACACGGCTCCAGATTCAAGGCCAGACGAATGATGCAAAATTTAAGGAAATTAGATACCGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519547.5
ENST00000539591.5
CDS GCA 90 bp AAGCTTTGCTGTTTCAGAAGTTACCATTTTCAGAAAGATGTCTCATaGAGCCTTGGCTTGTCACAAATCCAATTTCTTCAACTGCTCGTA +
Preference number: 5 (lower is better)
Translates to: KLCCFRSYHFQKDVS*SLGLSQIQFLQLLV
Trigger: TACGAGCAGTTGAAGAAATTGGATTTGTGACAAGCCAAGGCTGCATGAGACATCTTTCTGAAAATGGTAACTTCTGAAACAGCAAAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519676.6
ENST00000523988.5
ENST00000539591.5
CDS CCA 90 bp CTGTTTCAGAAGTTACCATTTTCAGAAAGATGTCTCATGCAGCCTTaGCTTGTCACAAATCCAATTTCTTCAACTGCTCGTATGTCACAA +
Preference number: 5 (lower is better)
Translates to: LFQKLPFSERCLMQP*LVTNPISSTARMSQ
Trigger: TTGTGACATACGAGCAGTTGAAGAAATTGGATTTGTGACAAGCCAAGGCTGCATGAGACATCTTTCTGAAAATGGTAACTTCTGAAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519676.6
ENST00000523988.5
ENST00000539591.5
CDS-3UTR CAA 90 bp GTTGGATTAGCAATGGTTGAAGATATGACTCCAGACAGAATTCCACATATCACATTGAATGGTGTTGCTTaGCGCTTGCATCCGAATTTT +
Preference number: 5 (lower is better)
Translates to: VGLAMVEDMTPDRIPHITLNGVA*RLHPNF
Trigger: AAAATTCGGATGCAAGCGCAAAGCAACACCATTCAA...TGTGATATGTGGAATTCTGTCTGGAGTCATATCTTCAACCATTGCTAATCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310862.11
ENST00000463262.1
CDS-3UTR CAA 90 bp AAACGTTTGATGAAGAGCATCCAATGCCAACACACAGCAATCTCAACTAACCCAAACATGTATTTAATGTaGTTCTCAAAGGGGGAACTG +
Preference number: 5 (lower is better)
Translates to: KRLMKSIQCQHTAISTNPNMYLM*FSKGEL
Trigger: CAGTTCCCCCTTTGAGAACAACATTAAATACATGTT...TGGGTTAGTTGAGATTGCTGTGTGTTGGCATTGGATGCTCTTCATCAAACGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519676.6
ENST00000539591.5
CDS CCA 90 bp TCACAAATCCAATTTCTTCAACTGCTCGTATGTCACAAAGAACTGTaGTTATGGGTTAAGGATGACACAGAAAATGCCATCTTCACAACT +
Preference number: 5 (lower is better)
Translates to: SQIQFLQLLVCHKEL*LWVKDDTENAIFTT
Trigger: AGTTGTGAAGATGGCATTTTCTGTGTCATCCTTAACCCATAACCACAGTTCTTTGTGACATACGAGCAGTTGAAGAAATTGGATTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS-3UTR CAA 90 bp TTAGCAATGGTTGAAGATATGACTCCAGACAGAATTCCACATATCACATTTATCTCCTCTTGTCCCCTCTaGCTGGTAAATGTTCATGAA +
Preference number: 5 (lower is better)
Translates to: LAMVEDMTPDRIPHITFISSCPL*LVNVHE
Trigger: TTCATGAACATTTACCAGCAAGAGGGGACAAGAGGA...GATAAATGTGATATGTGGAATTCTGTCTGGAGTCATATCTTCAACCATTGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS GCA 90 bp TATGGGTTAAGGATGACACAGAAAATGCCATCTTCACAACTCCAGTaGATAACAACAGACTTACAAATGGCACACTTAATAACAAATAGG +
Preference number: 5 (lower is better)
Translates to: YGLRMTQKMPSSQLQ*ITTDLQMAHLITNR
Trigger: CCTATTTGTTATTAAGTGTGCCATTTGTAAGTCTGTTGTTATGCACTGGAGTTGTGAAGATGGCATTTTCTGTGTCATCCTTAACCCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS-3UTR CAA 90 bp GTTGAAGATATGACTCCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTCAAGTCTCAACCAATTaGGCCAAAAGCCTTTATAGA +
Preference number: 5 (lower is better)
Translates to: VEDMTPDRIPHITFIGRVQVSTN*AKSLYR
Trigger: TCTATAAAGGCTTTTGGCCAAATTGGTTGAGACTTG...AACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGGAGTCATATCTTCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310862.11
CDS CCA 90 bp AGGGATATTCATACTAGTTTGACCCAACAGGAAGAAAGTACATTTTaGAAGGAGACCCAGTTCTTTTATAATCACAGGAAATATTTCCTC +
Preference number: 5 (lower is better)
Translates to: RDIHTSLTQQEESTF*KETQFFYNHRKYFL
Trigger: GAGGAAATATTTCCTGTGATTATAAAAGAACTGGGTCTCCTTCCAAAATGTACTTTCTTCCTGTTGGGTCAAACTAGTATGAATATCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS GCA 72 bp CAAGCCCTGGGAAGCTCTCCTCAAAGGCTTCCACTATaGATCCTTCCTTGGGAGGCAGGAGCTGATGAAGAG +
Preference number: 6 (lower is better)
Translates to: QALGSSPQRLPL*ILPWEAGADEE
Trigger: CTCTTCATCAGCTCCTGCCTCCCAAGGAAGGATGCATAGTGGAAGCCTTTGAGGAGAGCTTCCCAGGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS CCA 72 bp AGCTCTCCTCAAAGGCTTCCACTATGCATCCTTCCTTaGGAGGCAGGAGCTGATGAAGAGCAACAAGAGGAC +
Preference number: 6 (lower is better)
Translates to: SSPQRLPLCILP*EAGADEEQQED
Trigger: GTCCTCTTGTTGCTCTTCATCAGCTCCTGCCTCCCAAGGAAGGATGCATAGTGGAAGCCTTTGAGGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS GCA 72 bp CAATCCCCGAGTAGAGTGCTTTCAGCCCTTCTTCTCTaGCTATCCTCACTAATGCGTGCAACATTCCTCGGT +
Preference number: 6 (lower is better)
Translates to: QSPSRVLSALLL*LSSLMRATFLG
Trigger: ACCGAGGAATGTTGCACGCATTAGTGAGGATAGGCAGAGAAGAAGGGCTGAAAGCACTCTACTCGGGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519547.5
ENST00000519676.6
ENST00000539591.5
CDS GCA 72 bp TGCCTCCCACTGTGGCACATAGGAAGCGTGCTGGCCTaGCAAACAATTCCGGAGCTAATTCCTGTTTATCTT +
Preference number: 6 (lower is better)
Translates to: CLPLWHIGSVLA*QTIPELIPVYL
Trigger: AAGATAAACAGGAATTAGCTCCGGAATTGTTTGGCAGGCCAGCACGCTTCCTATGTGCCACAGTGGGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS CAA 90 bp TCCTGTTTGGAAGGACTGCCTAAGAAATCTTTGCTCTTTAGAGGCTaGTGTGGGTGGAAGACTAAGGCTCCATGCCCAACAACCCCACAC +
Preference number: 6 (lower is better)
Translates to: SCLEGLPKKSLLFRG*CGWKTKAPCPTTPH
Trigger: GTGTGGGGTTGTTGGGCATGGAGCCTTAGTCTTCCACCCACACAAGCCTCTAAAGAGCAAAGATTTCTTAGGCAGTCCTTCCAAACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS GCA 72 bp TTTAGAGGCTTGTGTGGGTGGAAGACTAAGGCTCCATaGCCAACAACCCCACACGAAGGATTGAATGAACTC +
Preference number: 6 (lower is better)
Translates to: FRGLCGWKTKAP*PTTPHEGLNEL
Trigger: GAGTTCATTCAATCCTTCGTGTGGGGTTGTTGGGCATGGAGCCTTAGTCTTCCACCCACACAAGCCTCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS CCA 72 bp CCTAAGAAATCTTTGCTCTTTAGAGGCTTGTGTGGGTaGAAGACTAAGGCTCCATGCCCAACAACCCCACAC +
Preference number: 6 (lower is better)
Translates to: PKKSLLFRGLCG*KTKAPCPTTPH
Trigger: GTGTGGGGTTGTTGGGCATGGAGCCTTAGTCTTCCACCCACACAAGCCTCTAAAGAGCAAAGATTTCTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS TCA 72 bp GCTGTGGTGGAAAAACTTTCCAGCACTGTAAGCTTTTaGGAGAGAGAGAGAGAGAGAGAGTTAGCAAGCCCT +
Preference number: 6 (lower is better)
Translates to: AVVEKLSSTVSF*ERERERELASP
Trigger: AGGGCTTGCTAACTCTCTCTCTCTCTCTCTCTCTCAAAAGCTTACAGTGCTGGAAAGTTTTTCCACCACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS CCA 72 bp CATCATTCGTCTGGCCTTGAATCTGGAGCCGTGTCTTaGTTAAATCAATTGGAAATGTACCGCACTCAGCAG +
Preference number: 6 (lower is better)
Translates to: HHSSGLESGAVS*LNQLEMYRTQQ
Trigger: CTGCTGAGTGCGGTACATTTCCAATTGATTTAACCAAGACACGGCTCCAGATTCAAGGCCAGACGAATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519676.6
CDS TCA 72 bp GCTGAGATATGTAAATCCCCTGGTATCAGCCTCTTCTaGGATGGCATCTACGCTGATAAGCTTTTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: AEICKSPGISLF*DGIYADKLLWL
Trigger: AAGCCACAAAAGCTTATCAGCGTAGATGCCATCTCAGAAGAGGCTGATACCAGGGGATTTACATATCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS GCA 72 bp GTGCAACATTCCTCGGTATCTAATTTCCTTAAATTTTaGATCATTCGTCTGGCCTTGAATCTGGAGCCGTGT +
Preference number: 6 (lower is better)
Translates to: VQHSSVSNFLKF*IIRLALNLEPC
Trigger: ACACGGCTCCAGATTCAAGGCCAGACGAATGATGCAAAATTTAAGGAAATTAGATACCGAGGAATGTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519547.5
ENST00000519676.6
ENST00000539591.5
CDS CCA 72 bp CTTCAACTGCTCGTATGTCACAAAGAACTGTGGTTATaGGTTAAGGATGACACAGAAAATGCCATCTTCACA +
Preference number: 6 (lower is better)
Translates to: LQLLVCHKELWL*VKDDTENAIFT
Trigger: TGTGAAGATGGCATTTTCTGTGTCATCCTTAACCCATAACCACAGTTCTTTGTGACATACGAGCAGTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS CAA 90 bp GCTGTTTCAGAAGTTACCATTTTCAGAAAGATGTCTCATGCAGCCTaGGCTTGTCACAAATCCAATTTCTTCAACTGCTCGTATGTCACA +
Preference number: 6 (lower is better)
Translates to: AVSEVTIFRKMSHAA*ACHKSNFFNCSYVT
Trigger: TGTGACATACGAGCAGTTGAAGAAATTGGATTTGTGACAAGCCAAGGCTGCATGAGACATCTTTCTGAAAATGGTAACTTCTGAAACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519676.6
ENST00000523988.5
ENST00000539591.5
CDS GCA 72 bp TTCAGCCCTTCTTCTCTGCCTATCCTCACTAATGCGTaGAACATTCCTCGGTATCTAATTTCCTTAAATTTT +
Preference number: 6 (lower is better)
Translates to: FSPSSLPILTNA*NIPRYLISLNF
Trigger: AAAATTTAAGGAAATTAGATACCGAGGAATGTTGCACGCATTAGTGAGGATAGGCAGAGAAGAAGGGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519547.5
ENST00000519676.6
ENST00000539591.5
CDS CCA 72 bp CAATTTCTTCAACTGCTCGTATGTCACAAAGAACTGTaGTTATGGGTTAAGGATGACACAGAAAATGCCATC +
Preference number: 6 (lower is better)
Translates to: QFLQLLVCHKEL*LWVKDDTENAI
Trigger: GATGGCATTTTCTGTGTCATCCTTAACCCATAACCACAGTTCTTTGTGACATACGAGCAGTTGAAGAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS CAA 72 bp GTTGAAAAATTATCTGTCTGGTGTAATGCTCACTATTaGGGTAATGGGTACATTAGAAGCCCAATCTCCACC +
Preference number: 6 (lower is better)
Translates to: VEKLSVWCNAHY*GNGYIRSPIST
Trigger: GGTGGAGATTGGGCTTCTAATGTACCCATTACCCAAATAGTGAGCATTACACCAGACAGATAATTTTTCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523988.5
CDS CAA 90 bp TTCAGAAGTTACCATTTTCAGAAAGATGTCTCATGCAGCCTTGGCTaGTCACAAATCCAATTTCTTCAACTGCTCGTATGTCACAAAGAA +
Preference number: 6 (lower is better)
Translates to: FRSYHFQKDVSCSLG*SQIQFLQLLVCHKE
Trigger: TTCTTTGTGACATACGAGCAGTTGAAGAAATTGGATTTGTGACAAGCCAAGGCTGCATGAGACATCTTTCTGAAAATGGTAACTTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519676.6
ENST00000523988.5
ENST00000539591.5
CDS TCA 72 bp CTAATTTCCTTAAATTTTGCATCATTCGTCTGGCCTTaGATCTGGAGCCGTGTCTTGGTTAAATCAATTGGA +
Preference number: 6 (lower is better)
Translates to: LISLNFASFVWP*IWSRVLVKSIG
Trigger: TCCAATTGATTTAACCAAGACACGGCTCCAGATTCAAGGCCAGACGAATGATGCAAAATTTAAGGAAATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519547.5
ENST00000519676.6
ENST00000539591.5
CDS GCA 72 bp AGGATGACACAGAAAATGCCATCTTCACAACTCCAGTaGATAACAACAGACTTACAAATGGCACACTTAATA +
Preference number: 6 (lower is better)
Translates to: RMTQKMPSSQLQ*ITTDLQMAHLI
Trigger: TATTAAGTGTGCCATTTGTAAGTCTGTTGTTATGCACTGGAGTTGTGAAGATGGCATTTTCTGTGTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523988.5