RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC25A29 (Homo sapiens)

Ensembl gene IDs: ENSG00000197119

Ensembl transcript IDs: ENST00000359232.8, ENST00000392908.7, ENST00000553359.5, ENST00000553574.1, ENST00000554060.1, ENST00000554224.5, ENST00000554912.1, ENST00000555051.5, ENST00000555475.1, ENST00000555888.1, ENST00000555949.2, ENST00000556201.1, ENST00000556505.5, ENST00000556715.6, ENST00000556844.1, ENST00000556868.1, ENST00000556873.5, ENST00000557438.1

Found 792 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCGCCAGCCCTCGGCGCGGTAGCTCTGGTGCACGCAGTCCAGGATaGCGCGGTAGCGCGGGGCGCCCCGCAGTCCGTCCGCCTGCAGCC +
Preference number: 1 (lower is better)
Translates to: RASPRRGSSGARSPG*RGSAGRPAVRPPAA
Trigger: GGCTGCAGGCGGACGGACTGCGGGGCGCCCCGCGCTACCGCGGCATCCTGGACTGCGTGCACCAGAGCTACCGCGCCGAGGGCTGGCGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392908.7
ENST00000554224.5
3UTR CCA 90 bp GCGCCCGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGTaGCCCAGGGCCCGGAGGGTGTTGCCCTGCACCCCGAACACCAGC +
Preference number: 1 (lower is better)
Translates to: APAAAPARNWLRGES*PRARRVLPCTPNTS
Trigger: GCTGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCTGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR CCA 90 bp AGAGCCAGGACACGATGCCTGACGTACCGCCCGCCAACAGCAGCTTaGGCACCAGCAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGCG +
Preference number: 1 (lower is better)
Translates to: RARTRCLTYRPPTAA*APAGGRPARSPAPA
Trigger: CGCGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTGCTGGTGCCCAAGCTGCTGTTGGCGGGCGGTACGTCAGGCATCGTGTCCTGGCTCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
3UTR GCA 90 bp CATGGGGCAGCAGATGACGCACTGGATGGCGCCCGCCGCCGCACCTaGCAGGAACTGGTTGAGGGGCGAGTCGTGGCCCAGGGCCCGGAG +
Preference number: 1 (lower is better)
Translates to: HGAADDALDGARRRT*QELVEGRVVAQGPE
Trigger: CTCCGGGCCCTGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGCTGCCCCATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR CCA 90 bp TGCAGCCGCGTCTTGGCCAGCTCCATGGGGCAGCAGATGACGCACTaGATGGCGCCCGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGC +
Preference number: 1 (lower is better)
Translates to: CSRVLASSMGQQMTH*MAPAAAPARNWLRG
Trigger: GCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGCTGCCCCATGGAGCTGGCCAAGACGCGGCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR TCA 90 bp CGAAGCTGGGCGTCTCACGCAGCAACGTGGACACCATGCCCCGGTTaGCGCCACGCAGACCCTCGTGCCCGTAGATCTGCGCGAGGCAGT +
Preference number: 1 (lower is better)
Translates to: RSWASHAATWTPCPG*RHADPRARRSARGS
Trigger: ACTGCCTCGCGCAGATCTACGGGCACGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGTCCACGTTGCTGCGTGAGACGCCCAGCTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR TCA 90 bp GGAGGTGTTCCAGGCCTGGTGAGGGGGTCCCATACTGTTCTCTGCTaGGCCCTCTGCACACTTTGGGGGATCCTGGCTGGCGGTGGTAGG +
Preference number: 1 (lower is better)
Translates to: GGVPGLVRGSHTVLC*ALCTLWGILAGGGR
Trigger: CCTACCACCGCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGCTCAGCAGAGAACAGTATGGGACCCCCTCACCAGGCCTGGAACACCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR TCA 90 bp CTTGACCACGTCCACAGGATAGGTAGAGAGCCAGGACACGATGCCTaGCGTACCGCCCGCCAACAGCAGCTTGGGCACCAGCAGGCGGTC +
Preference number: 1 (lower is better)
Translates to: LDHVHRIGREPGHDA*RTARQQQLGHQQAV
Trigger: GACCGCCTGCTGGTGCCCAAGCTGCTGTTGGCGGGCGGTACGTCAGGCATCGTGTCCTGGCTCTCTACCTATCCTGTGGACGTGGTCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
3UTR CCA 90 bp CCCATACTGTTCTCTGCTGAGCCCTCTGCACACTTTGGGGGATCCTaGCTGGCGGTGGTAGGTGGGCCGGAGACTCAGTTGTCCGTCAGC +
Preference number: 1 (lower is better)
Translates to: PILFSAEPSAHFGGS*LAVVGGPETQLSVS
Trigger: GCTGACGGACAACTGAGTCTCCGGCCCACCTACCACCGCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGCTCAGCAGAGAACAGTATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR TCA 90 bp GCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTaGACTGTCCAGACCTCCACCGCTGGCCTGTTTGCTCCCCACCCT +
Preference number: 1 (lower is better)
Translates to: AQRRKDFSLPQLHHT*TVQTSTAGLFAPHP
Trigger: AGGGTGGGGAGCAAACAGGCCAGCGGTGGAGGTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR GCA 90 bp GGCAGCCTGAGGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTaGATCACACTTGAACTGTCCAGACCTCCACCGCTGGCCTGTTTG +
Preference number: 1 (lower is better)
Translates to: GSLRPRGGRISPCHS*ITLELSRPPPLACL
Trigger: CAAACAGGCCAGCGGTGGAGGTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCCTCAGGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR GCA 90 bp GAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTGGAGTGTCTaGCTCAGTTTCCAGGATAACGGTGCAATGGCCTCAGCCAGGCCA +
Preference number: 1 (lower is better)
Translates to: EHNDVARIPERGWSV*LSFQDNGAMASARP
Trigger: TGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGCAGACACTCCAGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR CCA 90 bp GCAGGGCAGGAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTaGAGTGTCTGCCTCAGTTTCCAGGATAACGGTGCAATGGCCTCA +
Preference number: 1 (lower is better)
Translates to: AGQEHNDVARIPERG*SVCLSFQDNGAMAS
Trigger: TGAGGCCATTGCACCGTTATCCTGGAAACTGAGGCAGACACTCCAGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR CCA 90 bp CGTTTGCTGGGGAGCAGAGGGACTGACCTTTGGCTTCTTTGTGGCTaGAGGTGTTCCAGGCCTGGTGAGGGGGTCCCATACTGTTCTCTG +
Preference number: 1 (lower is better)
Translates to: RLLGSRGTDLWLLCG*RCSRPGEGVPYCSL
Trigger: CAGAGAACAGTATGGGACCCCCTCACCAGGCCTGGAACACCTCCAGCCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCCCAGCAAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR CCA 90 bp AAAGGGGCTGGAGTGTCTGCCTCAGTTTCCAGGATAACGGTGCAATaGCCTCAGCCAGGCCAGGTGCTGGCTGCTGCTGGGAATAATCTC +
Preference number: 1 (lower is better)
Translates to: KGAGVSASVSRITVQ*PQPGQVLAAAGNNL
Trigger: GAGATTATTCCCAGCAGCAGCCAGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGCAGACACTCCAGCCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR CAA 90 bp GAGAGCCAGGACACGATGCCTGACGTACCGCCCGCCAACAGCAGCTaGGGCACCAGCAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGC +
Preference number: 2 (lower is better)
Translates to: ESQDTMPDVPPANSS*GTSRRSPGSQPSAR
Trigger: GCGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTGCTGGTGCCCAAGCTGCTGTTGGCGGGCGGTACGTCAGGCATCGTGTCCTGGCTCTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR CCA 90 bp CAACAGCAGCTTGGGCACCAGCAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGCCGCCAACAGCAGCTTaGGCACCAGCAGGCGGTCGC +
Preference number: 2 (lower is better)
Translates to: QQQLGHQQAVARLAAQRPPPTAA*APAGGR
Trigger: GCGACCGCCTGCTGGTGCCCAAGCTGCTGTTGGCGG...CGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTGCTGGTGCCCAAGCTGCTGTTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR TCA 90 bp GGCGCCCGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGTGGCCCAGCCAGGACACGATGCCTaGCGTACCGCCCGCCAACAG +
Preference number: 2 (lower is better)
Translates to: GARRRTCQELVEGRVVAQPGHDA*RTARQQ
Trigger: CTGTTGGCGGGCGGTACGTCAGGCATCGTGTCCTGG...CTGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR GCA 90 bp GGCCAGCTCCATGGGGCAGCAGATGACGCACTGGATGGCGCCCGCCGCCGCACCCGCAGTCCGTCCGCCTaGAGCCGCGACTTGACCACG +
Preference number: 2 (lower is better)
Translates to: GQLHGAADDALDGARRRTRSPSA*SRDLTT
Trigger: CGTGGTCAAGTCGCGGCTGCAGGCGGACGGACTGCG...GGTGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGCTGCCCCATGGAGCTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR TCA 90 bp CAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGCGTGAGAGCGTCATAGGTGAGCCAGGACACGATGCCTaGCGTACCGCCCGCCAACAG +
Preference number: 2 (lower is better)
Translates to: QAVARLAAQRPRESVIGEPGHDA*RTARQQ
Trigger: CTGTTGGCGGGCGGTACGTCAGGCATCGTGTCCTGG...CTCACCTATGACGCTCTCACGCGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR CCA 90 bp GAGGCAGTCCAGCGAGCCCTTGTAGGTGCGCGCTGGGCCCGCGTCCTGCAGCTGCCGCCAACAGCAGCTTaGGCACCAGCAGGCGGTCGC +
Preference number: 2 (lower is better)
Translates to: EAVQRALVGARWARVLQLPPTAA*APAGGR
Trigger: GCGACCGCCTGCTGGTGCCCAAGCTGCTGTTGGCGG...CAGCTGCAGGACGCGGGCCCAGCGCGCACCTACAAGGGCTCGCTGGACTGCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR TCA 90 bp GCGTTGACGGGGAAGGCGCGCAGCAGCGTGGACGCCAGCCCCCGTGTGAAGACGCCAGGACACGATGCCTaGCGTACCGCCCGCCAACAG +
Preference number: 2 (lower is better)
Translates to: ALTGKARSSVDASPRVKTPGHDA*RTARQQ
Trigger: CTGTTGGCGGGCGGTACGTCAGGCATCGTGTCCTGG...CGTCTTCACACGGGGGCTGGCGTCCACGCTGCTGCGCGCCTTCCCCGTCAACGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392908.7
3UTR-3UTR GCA 90 bp GCCACCCCTGTGCCCACTAGCAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGGCACGCAGTCCAGGATaGCGCGGTAGCGCGGGGCGC +
Preference number: 2 (lower is better)
Translates to: ATPVPTSRPCAFTGMKPWARSPG*RGSAGR
Trigger: GCGCCCCGCGCTACCGCGGCATCCTGGACTGCGTGC...CCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTGCTAGTGGGCACAGGGGTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392908.7
3UTR-3UTR GCA 90 bp CTCGTGCCCGTAGATCTGCGCGAGGCAGTCCAGCGAGCCCTTGTAGGTGCGCGCCCCGCGTCCTGCAGCTaGAGCCGCGTCTTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: LVPVDLREAVQRALVGARPASCS*SRVLAS
Trigger: GCTGGCCAAGACGCGGCTGCAGCTGCAGGACGCGGG...GCGCGCACCTACAAGGGCTCGCTGGACTGCCTCGCGCAGATCTACGGGCACGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR GCA 90 bp CATGCCCCGGTTGACGCCACGCAGACCCTCGTGCCCGTAGATCTGCGCGAGGCAGCTGGGCCCGCGTCCTaGAGCTGCAGCCGCGTCTTG +
Preference number: 2 (lower is better)
Translates to: HAPVDATQTLVPVDLREAAGPAS*SCSRVL
Trigger: CAAGACGCGGCTGCAGCTGCAGGACGCGGGCCCAGC...TGCCTCGCGCAGATCTACGGGCACGAGGGTCTGCGTGGCGTCAACCGGGGCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR CCA 90 bp CAGCCGCGTCTTGGCCAGCTCCATGGGGCAGCAGATGACGCACTGGATGGCGCCTTGAGGGGCGAGTCGTaGCCCAGGGCCCGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: QPRLGQLHGAADDALDGALRGES*PRARRV
Trigger: CACCCTCCGGGCCCTGGGCCACGACTCGCCCCTCAA...GGCGCCATCCAGTGCGTCATCTGCTGCCCCATGGAGCTGGCCAAGACGCGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR CAA 90 bp CCCAGGGCCCGGAGGGTGTTGCCCTGCACCCCGAACACCAGCGCGTaGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTAC +
Preference number: 2 (lower is better)
Translates to: PRARRVLPCTPNTSA*MKVSPMSGEPRPLY
Trigger: GTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR-3UTR GCA 90 bp CAGCAACGTGGACACCATGCCCCGGTTGACGCCACGCAGACCCTCGTGCCCGTAGCCCGCCGCCGCACCTaGCAGGAACTGGTTGAGGGG +
Preference number: 2 (lower is better)
Translates to: QQRGHHAPVDATQTLVPVARRRT*QELVEG
Trigger: CCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGC...TACGGGCACGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGTCCACGTTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR GCA 90 bp CTGGGCGTCTCACGCAGCAACGTGGACACCATGCCCCGGTTGACGCCACGCAGAGCGAGCCCTTGTAGGTaGGCGCTGGGCCCGCGTCCT +
Preference number: 2 (lower is better)
Translates to: LGVSRSNVDTMPRLTPRRASPCR*ALGPRP
Trigger: AGGACGCGGGCCCAGCGCGCACCTACAAGGGCTCGC...TCTGCGTGGCGTCAACCGGGGCATGGTGTCCACGTTGCTGCGTGAGACGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR CCA 90 bp CGTGCCCGTAGATCTGCGCGAGGCAGTCCAGCGAGCCCTTGTAGGTGCGCGCTGCAGCAGATGACGCACTaGATGGCGCCCGCCGCCGCA +
Preference number: 2 (lower is better)
Translates to: RARRSARGSPASPCRCALQQMTH*MAPAAA
Trigger: TGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGCTG...CAGCGCGCACCTACAAGGGCTCGCTGGACTGCCTCGCGCAGATCTACGGGCACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR CCA 90 bp CCGGTTGACGCCACGCAGACCCTCGTGCCCGTAGATCTGCGCGAGGCAGTCCAGCTTGTAGGTGCGCGCTaGGCCCGCGTCCTGCAGCTG +
Preference number: 2 (lower is better)
Translates to: PVDATQTLVPVDLREAVQLVGAR*ARVLQL
Trigger: CAGCTGCAGGACGCGGGCCCAGCGCGCACCTACAAG...CTGGACTGCCTCGCGCAGATCTACGGGCACGAGGGTCTGCGTGGCGTCAACCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR CAA 90 bp AGGAACTGGTTGAGGGGCGAGTCGTGGCCCAGGGCCCGGAGGGTGTaGCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCC +
Preference number: 2 (lower is better)
Translates to: RNWLRGESWPRARRV*PCTPNTSALMKVSP
Trigger: GGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCTGGGCCACGACTCGCCCCTCAACCAGTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR-3UTR TCA 90 bp CAACAGCAGCTTGGGCACCAGCAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGTATGTCCCAGGTTTCTaGGAAGGAGCCCTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: QQQLGHQQAVARLAAQRPYVPGF*EGALGK
Trigger: CTTCCCCAGGGCTCCTTCTCAGAAACCTGGGACATA...CGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTGCTGGTGCCCAAGCTGCTGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392908.7
3UTR-3UTR TCA 90 bp ACCGTGACGGTGGCGAAGGTGGCAGCGTTGACGGGGAAGGCGCGCAGCAGCGTGCCTGCAGCCGCGACTTaGCCACGTCCACAGGATAGG +
Preference number: 2 (lower is better)
Translates to: TVTVAKVAALTGKARSSVPAAAT*PRPQDR
Trigger: CCTATCCTGTGGACGTGGTCAAGTCGCGGCTGCAGG...CACGCTGCTGCGCGCCTTCCCCGTCAACGCTGCCACCTTCGCCACCGTCACGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392908.7
3UTR-3UTR TCA 90 bp CAGCCGCGTCTTGGCCAGCTCCATGGGGCAGCAGATGACGCACTGGATGGCGCCCTGCCAGGAACTGGTTaGGGGGCGAGTCGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: QPRLGQLHGAADDALDGALPGTG*GASRGP
Trigger: TGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAG...GGCGCCATCCAGTGCGTCATCTGCTGCCCCATGGAGCTGGCCAAGACGCGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR-3UTR TCA 90 bp CCGGTTGACGCCACGCAGACCCTCGTGCCCGTAGATCTGCGCGAGGCAGTCCAGCCTGCAGCCGCGACTTaGCCACGTCCACAGGATAGG +
Preference number: 2 (lower is better)
Translates to: PVDATQTLVPVDLREAVQPAAAT*PRPQDR
Trigger: CCTATCCTGTGGACGTGGTCAAGTCGCGGCTGCAGG...CTGGACTGCCTCGCGCAGATCTACGGGCACGAGGGTCTGCGTGGCGTCAACCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR TCA 90 bp CGCAGCAACGTGGACACCATGCCCCGGTTGACGCCACGCAGACCCTCGTGCCCGTCCACGCTCTGGACCTaGAGCCGTACTAGCGCTCTC +
Preference number: 2 (lower is better)
Translates to: RSNVDTMPRLTPRRPSCPSTLWT*SRTSAL
Trigger: GAGAGCGCTAGTACGGCTTCAGGTCCAGAGCGTGGA...CGGGCACGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGTCCACGTTGCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR GCA 90 bp CCGGTTGACGCCACGCAGACCCTCGTGCCCGTAGATCTGCGCGAGGCAGTCCAGAGAGCCAGGACACGATaGCTGACGTACCGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: PVDATQTLVPVDLREAVQRARTR*LTYRPP
Trigger: TGGCGGGCGGTACGTCAGGCATCGTGTCCTGGCTCT...CTGGACTGCCTCGCGCAGATCTACGGGCACGAGGGTCTGCGTGGCGTCAACCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR CCA 90 bp CATGCCCCGGTTGACGCCACGCAGACCCTCGTGCCCGTAGATCTGCGCGAGGCAGCACCTGCCAGGAACTaGTTGAGGGGCGAGTCGTGG +
Preference number: 2 (lower is better)
Translates to: HAPVDATQTLVPVDLREAAPARN*LRGESW
Trigger: CCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGC...TGCCTCGCGCAGATCTACGGGCACGAGGGTCTGCGTGGCGTCAACCGGGGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR TCA 90 bp CCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCCTGCAGCCGCGACTTaGCCACGTCCACAGGATAGG +
Preference number: 2 (lower is better)
Translates to: PCTPNTSALMKVSPMSGEPAAAT*PRPQDR
Trigger: CCTATCCTGTGGACGTGGTCAAGTCGCGGCTGCAGG...CTCGCCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR TCA 90 bp CCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGAACGTCCCGCGGTACTaGGGCTTCTCCACGCTCTGG +
Preference number: 2 (lower is better)
Translates to: PCTPNTSALMKVSPMSGENVPRY*GFSTLW
Trigger: CCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTT...CTCGCCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR-3UTR GCA 90 bp TTTGGGGGATCCTGGCTGGCGGTGGTAGGTGGGCCGGAGACTCAGTTGTCCGTCTGGCTTCCCGGAGGGTaGAGGGTCCCCAGTTCACCC +
Preference number: 2 (lower is better)
Translates to: FGGSWLAVVGGPETQLSVWLPGG*RVPSSP
Trigger: GGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCA...GACGGACAACTGAGTCTCCGGCCCACCTACCACCGCCAGCCAGGATCCCCCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR GCA 90 bp AGCCCTGGCACTGAGAATGCCTGGGAGGCACCGTTTGCTGGGGAGCAGAGGGACTGGCTTCCCGGAGGGTaGAGGGTCCCCAGTTCACCC +
Preference number: 2 (lower is better)
Translates to: SPGTENAWEAPFAGEQRDWLPGG*RVPSSP
Trigger: GGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCA...GTCCCTCTGCTCCCCAGCAAACGGTGCCTCCCAGGCATTCTCAGTGCCAGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR GCA 90 bp CGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGTGGCCCAGGGCCCGCCCAGCACGCTCTCTTaGTTGATGATGGACTTGAAG +
Preference number: 2 (lower is better)
Translates to: RRRTCQELVEGRVVAQGPPSTLS*LMMDLK
Trigger: CTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGG...CGGGCCCTGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR-3UTR CCA 90 bp CCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACCCTCGCTGGCGGTGGTAGGTaGGCCGGAGACTCAGTTGTC +
Preference number: 2 (lower is better)
Translates to: PPADSMASRRVQGPQFTLAGGGR*AGDSVV
Trigger: GACAACTGAGTCTCCGGCCCACCTACCACCGCCAGC...GAGGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR TCA 90 bp AGGGCCCGGAGGGTGTTGCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGTCCACGCTCTGGACCTaGAGCCGTACTAGCGCTCTC +
Preference number: 2 (lower is better)
Translates to: RARRVLPCTPNTSALMKVSTLWT*SRTSAL
Trigger: GAGAGCGCTAGTACGGCTTCAGGTCCAGAGCGTGGA...CACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR-3UTR GCA 90 bp CAGCAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGCGTGAGAGCGTCATAGGTCCCAGCACGCTCTCTTaGTTGATGATGGACTTGAAG +
Preference number: 2 (lower is better)
Translates to: QQAVARLAAQRPRESVIGPSTLS*LMMDLK
Trigger: CTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGG...ACCTATGACGCTCTCACGCGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR CCA 90 bp GAGAGCGTCATAGGTGAGGAAGTAGACGCCGAAGCTGGGCGTCTCACGCAGCAATTGAGGGGCGAGTCGTaGCCCAGGGCCCGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: ESVIGEEVDAEAGRLTQQLRGES*PRARRV
Trigger: CACCCTCCGGGCCCTGGGCCACGACTCGCCCCTCAA...TTGCTGCGTGAGACGCCCAGCTTCGGCGTCTACTTCCTCACCTATGACGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR TCA 90 bp CCGGGTGGAGGATGTGTGGAGTTAGAGGTCCCTGGGTGGCCCCTTGGTTGGCCAAGGGCAGGAGCACAATaGCGTGGCCAGGATCCCAGA +
Preference number: 2 (lower is better)
Translates to: PGGGCVELEVPGWPLGWPRAGAQ*RGQDPR
Trigger: TCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCT...TGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACATCCTCCACCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR TCA 90 bp TTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCAGCTCCACGCTCTGGACCTaGAGCCGTACTAGCGCTCTC +
Preference number: 2 (lower is better)
Translates to: LMKVSPMSGEPRPLYRPSSTLWT*SRTSAL
Trigger: GAGAGCGCTAGTACGGCTTCAGGTCCAGAGCGTGGA...GCTGGGCCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR-3UTR GCA 90 bp GGGAGGCACCGTTTGCTGGGGAGCAGAGGGACTGACCTTTGGCTTCTTTGTGGCTGGCTTCCCGGAGGGTaGAGGGTCCCCAGTTCACCC +
Preference number: 2 (lower is better)
Translates to: GRHRLLGSRGTDLWLLCGWLPGG*RVPSSP
Trigger: GGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCA...GCCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp GCCACCCCTGTGCCCACTAGCAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGTTAGAGGTCCCTGGGTaGCCCCTTGGTTGGCCATCA +
Preference number: 2 (lower is better)
Translates to: ATPVPTSRPCAFTGMKPWLEVPG*PLGWPS
Trigger: TGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAA...CCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTGCTAGTGGGCACAGGGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR TCA 90 bp TTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACGGAAGGAGGGCGGGGTaGGCGTCACAGGCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: FCTATPGCAKPSVVFTEHGRRAG*ASQAGG
Trigger: CCCTCCAGCCTGTGACGCTCACCCCGCCCTCCTTCC...GTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392908.7
3UTR-3UTR CCA 90 bp AGCCCTGGCACTGAGAATGCCTGGGAGGCACCGTTTGCTGGGGAGCAGAGGGACAGCCAGGCCAGGTGCTaGCTGCTGCTGGGAATAATC +
Preference number: 2 (lower is better)
Translates to: SPGTENAWEAPFAGEQRDSQARC*LLLGII
Trigger: GATTATTCCCAGCAGCAGCCAGCACCTGGCCTGGCT...GTCCCTCTGCTCCCCAGCAAACGGTGCCTCCCAGGCATTCTCAGTGCCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp CCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACCCTCCCTTTGGCTTCTTTGTaGCTGGAGGTGTTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: PPADSMASRRVQGPQFTLPLASL*LEVFQA
Trigger: GGCCTGGAACACCTCCAGCCACAAAGAAGCCAAAGG...GAGGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR CAA 90 bp GGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTaGAACTGTCCAGACCTCCACCGCTGGCCTGTTTGCTCCCCACCC +
Preference number: 2 (lower is better)
Translates to: GPEAEGFLLATAASH*NCPDLHRWPVCSPP
Trigger: GGGTGGGGAGCAAACAGGCCAGCGGTGGAGGTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR TCA 90 bp TGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACAGCTGCATCACACTTaGACTGTCCAGACCTCCACC +
Preference number: 2 (lower is better)
Translates to: WCLQQTPWLPGGCRVPSSQLHHT*TVQTST
Trigger: GGTGGAGGTCTGGACAGTTCAAGTGTGATGCAGCTG...TGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR TCA 90 bp CAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGCACTGAGAATGCCTGGGAGGGGGGAGCAGAGGGACTaGCCTTTGGCTTCTTTGTGG +
Preference number: 2 (lower is better)
Translates to: QALCLHRDEALALRMPGRGEQRD*PLASLW
Trigger: CCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCCC...CCTCCCAGGCATTCTCAGTGCCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR TCA 90 bp ATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCACGCCAGCCCCCGTGTaGAGACGCGCCAGCCCTCGG +
Preference number: 2 (lower is better)
Translates to: MQRIQFCDTRRHTKFSSVTPAPV*RRASPR
Trigger: CCGAGGGCTGGCGCGTCTTCACACGGGGGCTGGCGT...GACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392908.7
3UTR-3UTR TCA 90 bp GAGAGCGTCATAGGTGAGGAAGTAGACGCCGAAGCTGGGCGTCTCACGCAGCAAAACGTCCCGCGGTACTaGGGCTTCTCCACGCTCTGG +
Preference number: 2 (lower is better)
Translates to: ESVIGEEVDAEAGRLTQQNVPRY*GFSTLW
Trigger: CCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTT...TTGCTGCGTGAGACGCCCAGCTTCGGCGTCTACTTCCTCACCTATGACGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR GCA 90 bp GCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACATTCCCCAGCTGGGAGGCACCGTTTaGTGGGGAGCAGAGGGACTG +
Preference number: 2 (lower is better)
Translates to: ATPGCAKPSVVFTEHIPQLGGTV*WGAEGL
Trigger: CAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCCCAG...CTGGGGAATGTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR GCA 90 bp AGGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGGGTGCAGCCCTCCTCTaGCCCAGGCCCCAACTAGCC +
Preference number: 2 (lower is better)
Translates to: RPRGGRISPCHSCITLELGAALL*PRPQLA
Trigger: GGCTAGTTGGGGCCTGGGGCAGAGGAGGGCTGCACC...CAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR GCA 90 bp GGACACCATGCCCCGGTTGACGCCACGCAGACCCTCGTGCCCGTAGATCTGCGCCCCAGCACGCTCTCTTaGTTGATGATGGACTTGAAG +
Preference number: 2 (lower is better)
Translates to: GHHAPVDATQTLVPVDLRPSTLS*LMMDLK
Trigger: CTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGG...GCGCAGATCTACGGGCACGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR CCA 90 bp CCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCCTAGCCAGGCCAGGTGCTaGCTGCTGCTGGGAATAATC +
Preference number: 2 (lower is better)
Translates to: PSVVFTEHIPQDAWCSPPSQARC*LLLGII
Trigger: GATTATTCCCAGCAGCAGCCAGCACCTGGCCTGGCT...AGGAGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp ATGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCAGGAGCACAATGACGTaGCCAGGATCCCAGAAAGGG +
Preference number: 2 (lower is better)
Translates to: MVPPADSMASRRVQGPQFRSTMT*PGSQKG
Trigger: CCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCT...GAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp AGCCCTGGCACTGAGAATGCCTGGGAGGCACCGTTTGCTGGGGAGCAGAGGGACGGCATGTGGAGAAGCTaGGGTATGCAGAGGATCCAG +
Preference number: 2 (lower is better)
Translates to: SPGTENAWEAPFAGEQRDGMWRS*GMQRIQ
Trigger: CTGGATCCTCTGCATACCCCAGCTTCTCCACATGCC...GTCCCTCTGCTCCCCAGCAAACGGTGCCTCCCAGGCATTCTCAGTGCCAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp ATGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCCCTAGCAGTGGCATGTaGAGAAGCTGGGGTATGCAG +
Preference number: 2 (lower is better)
Translates to: MVPPADSMASRRVQGPQFPSSGM*RSWGMQ
Trigger: CTGCATACCCCAGCTTCTCCACATGCCACTGCTAGG...GAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp CACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGGTGGCCCACCACCCCTCCAGCAGACTCCATaGCTTCCCGGAGGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: HTKFSSVPNTDQRGGPPPLQQTP*LPGGCR
Trigger: CCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAG...GGGTGGTGGGCCACCCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp CAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGCACTGAGAATGCCTGGGAGGTCCCGCAGGCTGATATaGTGCCTCCAGCAGACTCCA +
Preference number: 2 (lower is better)
Translates to: QALCLHRDEALALRMPGRSRRLI*CLQQTP
Trigger: TGGAGTCTGCTGGAGGCACCATATCAGCCTGCGGGA...CCTCCCAGGCATTCTCAGTGCCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp GCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACATTCCCCAGCACTTTGGGGGATCCTaGCTGGCGGTGGTAGGTGGG +
Preference number: 2 (lower is better)
Translates to: ATPGCAKPSVVFTEHIPQHFGGS*LAVVGG
Trigger: CCCACCTACCACCGCCAGCCAGGATCCCCCAAAGTG...CTGGGGAATGTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp TGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCATGGCTTCTTTGTGGCTaGAGGTGTTCCAGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: WCLQQTPWLPGGCRVPSSWLLCG*RCSRPG
Trigger: ACCAGGCCTGGAACACCTCCAGCCACAAAGAAGCCA...TGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR CAA 90 bp AGCTGCATCACACTTGAACTGTCCAGACCTCCACCGCTGGCCTGTTaGCTCCCCACCCTAGTCCCGCAGGCTGATATGGTGCCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: SCITLELSRPPPLAC*LPTLVPQADMVPPA
Trigger: TGCTGGAGGCACCATATCAGCCTGCGGGACTAGGGTGGGGAGCAAACAGGCCAGCGGTGGAGGTCTGGACAGTTCAAGTGTGATGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR TCA 90 bp CAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGCACTGAGAATGCCTGGGAGGTATGTCCCAGGTTTCTaGGAAGGAGCCCTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: QALCLHRDEALALRMPGRYVPGF*EGALGK
Trigger: CTTCCCCAGGGCTCCTTCTCAGAAACCTGGGACATA...CCTCCCAGGCATTCTCAGTGCCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR TCA 90 bp CAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGCACTGAGAATGCCTGGGAGGGAGGATCCAGTTCTGTaGCACCAGGAGGCACACCAA +
Preference number: 2 (lower is better)
Translates to: QALCLHRDEALALRMPGREDPVL*HQEAHQ
Trigger: TTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTC...CCTCCCAGGCATTCTCAGTGCCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR TCA 90 bp CACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGGTGGCCCACCACCCCCTAGTCCCGCAGGCTaGTATGGTGCCTCCAGCAGA +
Preference number: 2 (lower is better)
Translates to: HTKFSSVPNTDQRGGPPPPSPAG*YGASSR
Trigger: TCTGCTGGAGGCACCATATCAGCCTGCGGGACTAGG...GGGTGGTGGGCCACCCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR TCA 90 bp CAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGCACTGAGAATGCCTGGGAGGCAGCTGCATCACACTTaGACTGTCCAGACCTCCACC +
Preference number: 2 (lower is better)
Translates to: QALCLHRDEALALRMPGRQLHHT*TVQTST
Trigger: GGTGGAGGTCTGGACAGTTCAAGTGTGATGCAGCTG...CCTCCCAGGCATTCTCAGTGCCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR TCA 90 bp GGGAGGCACCGTTTGCTGGGGAGCAGAGGGACTGACCTTTGGCTTCTTTGTGGCCAGTGTCGTCTTCACTaGGCACATTCCCCAGGACGC +
Preference number: 2 (lower is better)
Translates to: GRHRLLGSRGTDLWLLCGQCRLH*AHSPGR
Trigger: GCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTG...GCCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp AGCCCTGGCACTGAGAATGCCTGGGAGGCACCGTTTGCTGGGGAGCAGAGGGACATCCCAGAAAGGGGCTaGAGTGTCTGCCTCAGTTTC +
Preference number: 2 (lower is better)
Translates to: SPGTENAWEAPFAGEQRDIPERG*SVCLSF
Trigger: GAAACTGAGGCAGACACTCCAGCCCCTTTCTGGGAT...GTCCCTCTGCTCCCCAGCAAACGGTGCCTCCCAGGCATTCTCAGTGCCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp AGGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGCCCTGGGTGGCCCCTTaGTTGGCCATCAGAGACCCC +
Preference number: 2 (lower is better)
Translates to: RPRGGRISPCHSCITLELPWVAP*LAIRDP
Trigger: GGGGTCTCTGATGGCCAACCAAGGGGCCACCCAGGG...CAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp TTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACCCCTGGGTGGCCCCTTaGTTGGCCATCAGAGACCCC +
Preference number: 2 (lower is better)
Translates to: FCTATPGCAKPSVVFTEHPWVAP*LAIRDP
Trigger: GGGGTCTCTGATGGCCAACCAAGGGGCCACCCAGGG...GTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp GCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGACCCTGGGTGGCCCCTTaGTTGGCCATCAGAGACCCC +
Preference number: 2 (lower is better)
Translates to: AKFSPRLIDSTARSIPAGPWVAP*LAIRDP
Trigger: GGGGTCTCTGATGGCCAACCAAGGGGCCACCCAGGG...TCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR CCA 90 bp AGGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGCCAGACCTCCACCGCTaGCCTGTTTGCTCCCCACCC +
Preference number: 2 (lower is better)
Translates to: RPRGGRISPCHSCITLELPDLHR*PVCSPP
Trigger: GGGTGGGGAGCAAACAGGCCAGCGGTGGAGGTCTGG...CAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp TACAGGCCCAGCACGCTCTCTTGCTTGATGATGGACTTGAAGCAGTGCAACGTCCCGCCAACAGCAGCTTaGGCACCAGCAGGCGGTCGC +
Preference number: 2 (lower is better)
Translates to: YRPSTLSCLMMDLKQCNVPPTAA*APAGGR
Trigger: GCGACCGCCTGCTGGTGCCCAAGCTGCTGTTGGCGG...GACGTTGCACTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGGCCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR TCA 90 bp GGTACCCCTAGCAGTGGCATGTGGAGAAGCTGGGGTATGCAGAGGATCCAGTTCAGGGCAGGAGCACAATaGCGTGGCCAGGATCCCAGA +
Preference number: 2 (lower is better)
Translates to: GTPSSGMWRSWGMQRIQFRAGAQ*RGQDPR
Trigger: TCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCT...GAACTGGATCCTCTGCATACCCCAGCTTCTCCACATGCCACTGCTAGGGGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR TCA 90 bp AGGCCCTTGTACAGGCCCAGCACGCTCTCTTGCTTGATGATGGACTTGAAGCAGAACGTCCCGCGGTACTaGGGCTTCTCCACGCTCTGG +
Preference number: 2 (lower is better)
Translates to: RPLYRPSTLSCLMMDLKQNVPRY*GFSTLW
Trigger: CCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTT...CTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGGCCTGTACAAGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR-3UTR GCA 90 bp CAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGCACTGAGAATGCCTGGGAGGGGAGAAGCTGGGGTATaGAGAGGATCCAGTTCTGTG +
Preference number: 2 (lower is better)
Translates to: QALCLHRDEALALRMPGRGEAGV*RGSSSV
Trigger: CACAGAACTGGATCCTCTGCATACCCCAGCTTCTCC...CCTCCCAGGCATTCTCAGTGCCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp CACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGGTGGCCCACCACCCAGCCAGGCCAGGTGCTaGCTGCTGCTGGGAATAATC +
Preference number: 2 (lower is better)
Translates to: HTKFSSVPNTDQRGGPPPSQARC*LLLGII
Trigger: GATTATTCCCAGCAGCAGCCAGCACCTGGCCTGGCT...GGGTGGTGGGCCACCCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR CCA 90 bp GTCTGCCTCAGTTTCCAGGATAACGGTGCAATGGCCTCAGCCAGGCCAGGTGCTAGGATAACGGTGCAATaGCCTCAGCCAGGCCAGGTG +
Preference number: 2 (lower is better)
Translates to: VCLSFQDNGAMASARPGARITVQ*PQPGQV
Trigger: CACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCT...AGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR CCA 90 bp CCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCACCCTGGGTGGCCCCTTaGTTGGCCATCAGAGACCCC +
Preference number: 2 (lower is better)
Translates to: PEAEGFLLATAASHLNCPPWVAP*LAIRDP
Trigger: GGGGTCTCTGATGGCCAACCAAGGGGCCACCCAGGG...TGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp GTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGGGAGTTAGAGGTCCCTaGGTGGCCCCTTGGTTGGCC +
Preference number: 2 (lower is better)
Translates to: VTPGGTPSFPLSLTQTRGGVRGP*VAPWLA
Trigger: GGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCC...CCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR CCA 90 bp TTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACAGGAGTGGCAGCAGCTaGGGTACCCCTAGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: FCTATPGCAKPSVVFTEHRSGSS*GTPSSG
Trigger: GCCACTGCTAGGGGTACCCCAGCTGCTGCCACTCCT...GTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp AGGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGCACTTTGGGGGATCCTaGCTGGCGGTGGTAGGTGGG +
Preference number: 2 (lower is better)
Translates to: RPRGGRISPCHSCITLELHFGGS*LAVVGG
Trigger: CCCACCTACCACCGCCAGCCAGGATCCCCCAAAGTG...CAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR TCA 90 bp AGGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGAGGGCAGGAGCACAATaGCGTGGCCAGGATCCCAGA +
Preference number: 2 (lower is better)
Translates to: RPRGGRISPCHSCITLELRAGAQ*RGQDPR
Trigger: TCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCT...CAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR TCA 90 bp GCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGAGGATCCAGTTCTGTaGCACCAGGAGGCACACCAA +
Preference number: 2 (lower is better)
Translates to: ATPGCAKPSVVFTEHIPQEDPVL*HQEAHQ
Trigger: TTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTC...CTGGGGAATGTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR TCA 90 bp GGGAGGCACCGTTTGCTGGGGAGCAGAGGGACTGACCTTTGGCTTCTTTGTGGCCATACTGTTCTCTGCTaGGCCCTCTGCACACTTTGG +
Preference number: 2 (lower is better)
Translates to: GRHRLLGSRGTDLWLLCGHTVLC*ALCTLW
Trigger: CCAAAGTGTGCAGAGGGCTCAGCAGAGAACAGTATG...GCCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR GCA 90 bp GCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGACTCAGCCAGGCCAGGTaGTGGCTGCTGCTGGGAATA +
Preference number: 2 (lower is better)
Translates to: AKFSPRLIDSTARSIPAGLSQAR*WLLLGI
Trigger: TATTCCCAGCAGCAGCCAGCACCTGGCCTGGCTGAG...TCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR CCA 90 bp GGTACCCCTAGCAGTGGCATGTGGAGAAGCTGGGGTATGCAGAGGATCCAGTTCAGGATAACGGTGCAATaGCCTCAGCCAGGCCAGGTG +
Preference number: 2 (lower is better)
Translates to: GTPSSGMWRSWGMQRIQFRITVQ*PQPGQV
Trigger: CACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCT...GAACTGGATCCTCTGCATACCCCAGCTTCTCCACATGCCACTGCTAGGGGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR CCA 90 bp CAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTGGAGTTAGAGGTCCCTaGGTGGCCCCTTGGTTGGCC +
Preference number: 2 (lower is better)
Translates to: QRIQFCDTRRHTKFSSVPGVRGP*VAPWLA
Trigger: GGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCC...AGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR CCA 90 bp AAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGGGAGTTAGAGGTCCCTaGGTGGCCCCTTGGTTGGCC +
Preference number: 2 (lower is better)
Translates to: KIQPTSDRLHSSQHPSRKGVRGP*VAPWLA
Trigger: GGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCC...CTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR CCA 90 bp CCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAAGGAGTGGCAGCAGCTaGGGTACCCCTAGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: PEAEGFLLATAASHLNCPRSGSS*GTPSSG
Trigger: GCCACTGCTAGGGGTACCCCAGCTGCTGCCACTCCT...TGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp GCAGTGCAACGTCCCGCGGTACTGAGGCTTCTCCACGCTCTGGACCTGAAGCCGGTTACACTTTTGCTATaGATGGAGACAGCCCCTAGC +
Preference number: 2 (lower is better)
Translates to: AVQRPAVLRLLHALDLKPVTLLL*METAPS
Trigger: GCTAGGGGCTGTCTCCATCCATAGCAAAAGTGTAAC...CGGCTTCAGGTCCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTTGCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556868.1
3UTR-3UTR TCA 90 bp CTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCATATGTCCCAGGTTTCTaGGAAGGAGCCCTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: LIDSTARSIPAGSRAIDSYVPGF*EGALGK
Trigger: CTTCCCCAGGGCTCCTTCTCAGAAACCTGGGACATA...TGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR TCA 90 bp GAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGACAGGGCAGGAGCACAATaGCGTGGCCAGGATCCCAGA +
Preference number: 2 (lower is better)
Translates to: EAEGFLLATAASHLNCPDRAGAQ*RGQDPR
Trigger: TCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCT...GTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR TCA 90 bp GTGGGCCGGAGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACACAGCTGCATCACACTTaGACTGTCCAGACCTCCACC +
Preference number: 2 (lower is better)
Translates to: VGRRLSCPSAGHVPILWTQLHHT*TVQTST
Trigger: GGTGGAGGTCTGGACAGTTCAAGTGTGATGCAGCTG...TGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCTCCGGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR GCA 90 bp GCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCACAAAGTTACACTTTTaGTATGGATGGAGACAGCCC +
Preference number: 2 (lower is better)
Translates to: ALMKVSPMSGEPRPLYRPTKLHF*YGWRQP
Trigger: GGGCTGTCTCCATCCATAGCAAAAGTGTAACTTTGT...GGGCCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556868.1
3UTR-3UTR CCA 90 bp CGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCATCCCAGAAAGGGGCTaGAGTGTCTGCCTCAGTTTC +
Preference number: 2 (lower is better)
Translates to: RSIPAGSRAIDSGANLCPIPERG*SVCLSF
Trigger: GAAACTGAGGCAGACACTCCAGCCCCTTTCTGGGAT...GGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR CCA 90 bp TTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACTTAGAGGTCCCTGGGTaGCCCCTTGGTTGGCCATCA +
Preference number: 2 (lower is better)
Translates to: FCTATPGCAKPSVVFTEHLEVPG*PLGWPS
Trigger: TGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAA...GTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp TTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGGGAGTTAGAGGTCCCTaGGTGGCCCCTTGGTTGGCC +
Preference number: 2 (lower is better)
Translates to: FCDTRRHTKFSSVPNTDQGVRGP*VAPWLA
Trigger: GGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCC...CTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR CCA 90 bp GGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACTCCAGCAGACTCCATaGCTTCCCGGAGGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: GSSSVTPGGTPSFPLSLTLQQTP*LPGGCR
Trigger: CCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAG...TGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp CACTTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCACCAGACCTCCACCGCTaGCCTGTTTGCTCCCCACCC +
Preference number: 2 (lower is better)
Translates to: HFIPLTVSVQRHQAVQSPPDLHR*PVCSPP
Trigger: GGGTGGGGAGCAAACAGGCCAGCGGTGGAGGTCTGG...TGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR TCA 90 bp CCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGGGGAGCAGAGGGACTaGCCTTTGGCTTCTTTGTGG +
Preference number: 2 (lower is better)
Translates to: PEAEGFLLATAASHLNCPGEQRD*PLASLW
Trigger: CCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCCC...TGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR GCA 90 bp TCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGACTCAGCCAGGCCAGGTaGTGGCTGCTGCTGGGAATA +
Preference number: 2 (lower is better)
Translates to: SVTPGGTPSFPLSLTQTRLSQAR*WLLLGI
Trigger: TATTCCCAGCAGCAGCCAGCACCTGGCCTGGCTGAG...TCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR GCA 90 bp GGTACCCCTAGCAGTGGCATGTGGAGAAGCTGGGGTATGCAGAGGATCCAGTTCAGGGGCTGGAGTGTCTaGCTCAGTTTCCAGGATAAC +
Preference number: 2 (lower is better)
Translates to: GTPSSGMWRSWGMQRIQFRGWSV*LSFQDN
Trigger: GTTATCCTGGAAACTGAGGCAGACACTCCAGCCCCT...GAACTGGATCCTCTGCATACCCCAGCTTCTCCACATGCCACTGCTAGGGGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR GCA 90 bp CCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCACGCAGGCTGATATGGTaGCTCCAGCAGACTCCATGG +
Preference number: 2 (lower is better)
Translates to: PEAEGFLLATAASHLNCPRRLIW*LQQTPW
Trigger: CCATGGAGTCTGCTGGAGGCACCATATCAGCCTGCG...TGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR GCA 90 bp GAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGACCGCAGGCTGATATGGTaGCTCCAGCAGACTCCATGG +
Preference number: 2 (lower is better)
Translates to: EAEGFLLATAASHLNCPDRRLIW*LQQTPW
Trigger: CCATGGAGTCTGCTGGAGGCACCATATCAGCCTGCG...GTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp GAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGACTTAGAGGTCCCTGGGTaGCCCCTTGGTTGGCCATCA +
Preference number: 2 (lower is better)
Translates to: EAEGFLLATAASHLNCPDLEVPG*PLGWPS
Trigger: TGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAA...GTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR TCA 90 bp AAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGTATGTCCCAGGTTTCTaGGAAGGAGCCCTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: KIQPTSDRLHSSQHPSRKYVPGF*EGALGK
Trigger: CTTCCCCAGGGCTCCTTCTCAGAAACCTGGGACATA...CTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR TCA 90 bp CCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCCTAACACTTTATTCCCTTaGCAGTTTCTGTACAGCGAC +
Preference number: 2 (lower is better)
Translates to: PSVVFTEHIPQDAWCSPPNTLFP*QFLYSD
Trigger: GTCGCTGTACAGAAACTGTCAAGGGAATAAAGTGTT...AGGAGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR GCA 90 bp GGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTAGGGGCTGGAGTGTCTaGCTCAGTTTCCAGGATAAC +
Preference number: 2 (lower is better)
Translates to: GPEAEGFLLATAASHLNCRGWSV*LSFQDN
Trigger: GTTATCCTGGAAACTGAGGCAGACACTCCAGCCCCT...ACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR GCA 90 bp GCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGGGGCTGGAGTGTCTaGCTCAGTTTCCAGGATAAC +
Preference number: 2 (lower is better)
Translates to: AKFSPRLIDSTARSIPAGRGWSV*LSFQDN
Trigger: GTTATCCTGGAAACTGAGGCAGACACTCCAGCCCCT...TCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR CCA 90 bp TTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACATCCCAGAAAGGGGCTaGAGTGTCTGCCTCAGTTTC +
Preference number: 2 (lower is better)
Translates to: FCTATPGCAKPSVVFTEHIPERG*SVCLSF
Trigger: GAAACTGAGGCAGACACTCCAGCCCCTTTCTGGGAT...GTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp CCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCACCTTTGGCTTCTTTGTaGCTGGAGGTGTTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: PEAEGFLLATAASHLNCPPLASL*LEVFQA
Trigger: GGCCTGGAACACCTCCAGCCACAAAGAAGCCAAAGG...TGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp TTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGGGCACTGAGAATGCCTaGGAGGCACCGTTTGCTGGG +
Preference number: 2 (lower is better)
Translates to: FIPLTVSVQRHQAVQSPVGTENA*EAPFAG
Trigger: CCCAGCAAACGGTGCCTCCCAGGCATTCTCAGTGCC...CACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR GCA 90 bp GAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGACGGAGAAGCTGGGGTATaGAGAGGATCCAGTTCTGTG +
Preference number: 2 (lower is better)
Translates to: EAEGFLLATAASHLNCPDGEAGV*RGSSSV
Trigger: CACAGAACTGGATCCTCTGCATACCCCAGCTTCTCC...GTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR GCA 90 bp AGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACAGGCAGCCTGTCTCCTTGCCACAGCTaGATCACACTTGAACTGTCC +
Preference number: 2 (lower is better)
Translates to: RLSCPSAGHVPILWTGSLSPCHS*ITLELS
Trigger: GGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGA...CAGGCTGCCTGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp TTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGAGCACAATGACGTaGCCAGGATCCCAGAAAGGG +
Preference number: 2 (lower is better)
Translates to: FCDTRRHTKFSSVPNTDQRSTMT*PGSQKG
Trigger: CCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCT...CTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR CCA 90 bp GGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACAGGCATGTGGAGAAGCTaGGGTATGCAGAGGATCCAG +
Preference number: 2 (lower is better)
Translates to: GSSSVTPGGTPSFPLSLTGMWRS*GMQRIQ
Trigger: CTGGATCCTCTGCATACCCCAGCTTCTCCACATGCC...TGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR GCA 90 bp TTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCAGGAGAAGCTGGGGTATaGAGAGGATCCAGTTCTGTG +
Preference number: 2 (lower is better)
Translates to: LTVSVQRHQAVQSPVSSSGEAGV*RGSSSV
Trigger: CACAGAACTGGATCCTCTGCATACCCCAGCTTCTCC...TGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CCA 90 bp GTATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGATCCCAGAAAGGGGCTaGAGTGTCTGCCTCAGTTTC +
Preference number: 2 (lower is better)
Translates to: VCRGSSSVTPGGTPSFPLIPERG*SVCLSF
Trigger: GAAACTGAGGCAGACACTCCAGCCCCTTTCTGGGAT...CAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR CCA 90 bp TTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGCCTAGCAGTGGCATGTaGAGAAGCTGGGGTATGCAG +
Preference number: 2 (lower is better)
Translates to: FIPLTVSVQRHQAVQSPVPSSGM*RSWGMQ
Trigger: CTGCATACCCCAGCTTCTCCACATGCCACTGCTAGG...CACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR TCA 90 bp TCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGACCAAAACTACCCAGCTaGTCAGCAAAATTCAGCCCA +
Preference number: 2 (lower is better)
Translates to: SVTPGGTPSFPLSLTQTRPKLPS*SAKFSP
Trigger: TGGGCTGAATTTTGCTGATCAGCTGGGTAGTTTTGG...TCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR GCA 90 bp TTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCAGGAAGGATTTCTCCTTaGCACAGCTGCATCACACTT +
Preference number: 2 (lower is better)
Translates to: LTVSVQRHQAVQSPVSSSGRISP*HSCITL
Trigger: AAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCC...TGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR GCA 72 bp CCTCGGCGCGGTAGCTCTGGTGCACGCAGTCCAGGATaGCGCGGTAGCGCGGGGCGCCCCGCAGTCCGTCCG +
Preference number: 3 (lower is better)
Translates to: PRRGSSGARSPG*RGSAGRPAVRP
Trigger: CGGACGGACTGCGGGGCGCCCCGCGCTACCGCGGCATCCTGGACTGCGTGCACCAGAGCTACCGCGCCGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392908.7
ENST00000554224.5
3UTR TCA 72 bp GGATGGCGCCCGCCGCCGCACCTGCCAGGAACTGGTTaGGGGGCGAGTCGTGGCCCAGGGCCCGGAGGGTGT +
Preference number: 3 (lower is better)
Translates to: GWRPPPHLPGTG*GASRGPGPGGC
Trigger: ACACCCTCCGGGCCCTGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCCATCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR CCA 72 bp CACTGGATGGCGCCCGCCGCCGCACCTGCCAGGAACTaGTTGAGGGGCGAGTCGTGGCCCAGGGCCCGGAGG +
Preference number: 3 (lower is better)
Translates to: HWMAPAAAPARN*LRGESWPRARR
Trigger: CCTCCGGGCCCTGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCCATCCAGTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR TCA 72 bp GGAAGGCGCGCAGCAGCGTGGACGCCAGCCCCCGTGTaGAGACGCGCCAGCCCTCGGCGCGGTAGCTCTGGT +
Preference number: 3 (lower is better)
Translates to: GRRAAAWTPAPV*RRASPRRGSSG
Trigger: ACCAGAGCTACCGCGCCGAGGGCTGGCGCGTCTTCACACGGGGGCTGGCGTCCACGCTGCTGCGCGCCTTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392908.7
3UTR CCA 72 bp GCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGTaGCCCAGGGCCCGGAGGGTGTTGCCCTGCACCCCG +
Preference number: 3 (lower is better)
Translates to: AAPARNWLRGES*PRARRVLPCTP
Trigger: CGGGGTGCAGGGCAACACCCTCCGGGCCCTGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR CCA 72 bp CGCGAGGCAGTCCAGCGAGCCCTTGTAGGTGCGCGCTaGGCCCGCGTCCTGCAGCTGCAGCCGCGTCTTGGC +
Preference number: 3 (lower is better)
Translates to: REAVQRALVGAR*ARVLQLQPRLG
Trigger: GCCAAGACGCGGCTGCAGCTGCAGGACGCGGGCCCAGCGCGCACCTACAAGGGCTCGCTGGACTGCCTCGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR TCA 72 bp GCAGCCGCGTCTTGGCCAGCTCCATGGGGCAGCAGATaGCGCACTGGATGGCGCCCGCCGCCGCACCTGCCA +
Preference number: 3 (lower is better)
Translates to: AAASWPAPWGSR*RTGWRPPPHLP
Trigger: TGGCAGGTGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGCTGCCCCATGGAGCTGGCCAAGACGCGGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR GCA 72 bp GCAGATGACGCACTGGATGGCGCCCGCCGCCGCACCTaGCAGGAACTGGTTGAGGGGCGAGTCGTGGCCCAG +
Preference number: 3 (lower is better)
Translates to: ADDALDGARRRT*QELVEGRVVAQ
Trigger: CTGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR CCA 72 bp ACACGATGCCTGACGTACCGCCCGCCAACAGCAGCTTaGGCACCAGCAGGCGGTCGCCCGGCTCGCAGCCCA +
Preference number: 3 (lower is better)
Translates to: TRCLTYRPPTAA*APAGGRPARSP
Trigger: TGGGCTGCGAGCCGGGCGACCGCCTGCTGGTGCCCAAGCTGCTGTTGGCGGGCGGTACGTCAGGCATCGTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR CAA 90 bp CTGGGCGTCTCACGCAGCAACGTGGACACCATGCCCCGGTTGACGCCACGCAGAAGGGCCCGGAGGGTGTaGCCCTGCACCCCGAACACC +
Preference number: 3 (lower is better)
Translates to: LGVSRSNVDTMPRLTPRRRARRV*PCTPNT
Trigger: GGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCT...TCTGCGTGGCGTCAACCGGGGCATGGTGTCCACGTTGCTGCGTGAGACGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR-3UTR CAA 90 bp CATGCCCCGGTTGACGCCACGCAGACCCTCGTGCCCGTAGATCTGCGCGAGGCACCTGCCAGGAACTGGTaGAGGGGCGAGTCGTGGCCC +
Preference number: 3 (lower is better)
Translates to: HAPVDATQTLVPVDLREAPARNW*RGESWP
Trigger: GGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGG...TGCCTCGCGCAGATCTACGGGCACGAGGGTCTGCGTGGCGTCAACCGGGGCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR CCA 72 bp GTCTTGGCCAGCTCCATGGGGCAGCAGATGACGCACTaGATGGCGCCCGCCGCCGCACCTGCCAGGAACTGG +
Preference number: 3 (lower is better)
Translates to: VLASSMGQQMTH*MAPAAAPARNW
Trigger: CCAGTTCCTGGCAGGTGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGCTGCCCCATGGAGCTGGCCAAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR-3UTR CAA 90 bp CTGGATGGCGCCCGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGTGCCGAACACCAGCGCGTaGATGAAGGTGAGCCCCATG +
Preference number: 3 (lower is better)
Translates to: LDGARRRTCQELVEGRVVPNTSA*MKVSPM
Trigger: CATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGG...CACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCCATCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR TCA 72 bp GCGTCTCACGCAGCAACGTGGACACCATGCCCCGGTTaGCGCCACGCAGACCCTCGTGCCCGTAGATCTGCG +
Preference number: 3 (lower is better)
Translates to: ASHAATWTPCPG*RHADPRARRSA
Trigger: CGCAGATCTACGGGCACGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGTCCACGTTGCTGCGTGAGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR GCA 72 bp TGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTaGAGGGTCCCCAGTTCACCCTCCAGCAGGAGTGGC +
Preference number: 3 (lower is better)
Translates to: WCLQQTPWLPGG*RVPSSPSSRSG
Trigger: GCCACTCCTGCTGGAGGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR CCA 72 bp CCGGGTGGAGGATGTGTGGAGTTAGAGGTCCCTGGGTaGCCCCTTGGTTGGCCATCAGAGACCCCCGGGAGC +
Preference number: 3 (lower is better)
Translates to: PGGGCVELEVPG*PLGWPSETPGS
Trigger: GCTCCCGGGGGTCTCTGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACATCCTCCACCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR CAA 90 bp GGCCAGCTCCATGGGGCAGCAGATGACGCACTGGATGGCGCCCGCCGCCGCACCTGCTTGATGATGGACTaGAAGCAGTGCAACGTCCCG +
Preference number: 3 (lower is better)
Translates to: GQLHGAADDALDGARRRTCLMMD*KQCNVP
Trigger: CGGGACGTTGCACTGCTTCAAGTCCATCATCAAGCA...GGTGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGCTGCCCCATGGAGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR CCA 72 bp AGGATGTGTGGAGTTAGAGGTCCCTGGGTGGCCCCTTaGTTGGCCATCAGAGACCCCCGGGAGCCAGCCTGC +
Preference number: 3 (lower is better)
Translates to: RMCGVRGPWVAP*LAIRDPREPAC
Trigger: GCAGGCTGGCTCCCGGGGGTCTCTGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACATCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR TCA 72 bp CCAGGCCTGGTGAGGGGGTCCCATACTGTTCTCTGCTaGGCCCTCTGCACACTTTGGGGGATCCTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: PGLVRGSHTVLC*ALCTLWGILAG
Trigger: GCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGCTCAGCAGAGAACAGTATGGGACCCCCTCACCAGGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CAA 90 bp CAACTAGCCACCCCTGTGCCCACTAGCAGGCCCTGTGCCTTCACAGGGATGAAGAGCCCTCTGCACACTTaGGGGGATCCTGGCTGGCGG +
Preference number: 3 (lower is better)
Translates to: QLATPVPTSRPCAFTGMKSPLHT*GDPGWR
Trigger: CCGCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGCT...CTTCATCCCTGTGAAGGCACAGGGCCTGCTAGTGGGCACAGGGGTGGCTAGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CAA 90 bp TTGGCCAGCTCCATGGGGCAGCAGATGACGCACTGGATGGCGCCCGCCGCCGCAGCCCAGCACGCTCTCTaGCTTGATGATGGACTTGAA +
Preference number: 3 (lower is better)
Translates to: LASSMGQQMTHWMAPAAAAQHAL*LDDGLE
Trigger: TTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGGC...TGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGCTGCCCCATGGAGCTGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR-3UTR CAA 90 bp GTCTGCCTCAGTTTCCAGGATAACGGTGCAATGGCCTCAGCCAGGCCAGGTGCTTCCCTGGGTGGCCCCTaGGTTGGCCATCAGAGACCC +
Preference number: 3 (lower is better)
Translates to: VCLSFQDNGAMASARPGASLGGP*VGHQRP
Trigger: GGGTCTCTGATGGCCAACCAAGGGGCCACCCAGGGA...AGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR TCA 72 bp GACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTaGGCACATTCCCCAGGACGCCTGGTGCAGCCCTCC +
Preference number: 3 (lower is better)
Translates to: DTRLCKAQCRLH*AHSPGRLVQPS
Trigger: GGAGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR TCA 72 bp GTCCACAGGATAGGTAGAGAGCCAGGACACGATGCCTaGCGTACCGCCCGCCAACAGCAGCTTGGGCACCAG +
Preference number: 3 (lower is better)
Translates to: VHRIGREPGHDA*RTARQQQLGHQ
Trigger: CTGGTGCCCAAGCTGCTGTTGGCGGGCGGTACGTCAGGCATCGTGTCCTGGCTCTCTACCTATCCTGTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
3UTR CCA 72 bp GGAGTGTCTGCCTCAGTTTCCAGGATAACGGTGCAATaGCCTCAGCCAGGCCAGGTGCTGGCTGCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: GVSASVSRITVQ*PQPGQVLAAAG
Trigger: CCCAGCAGCAGCCAGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGCAGACACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR CCA 72 bp TTCTCTGCTGAGCCCTCTGCACACTTTGGGGGATCCTaGCTGGCGGTGGTAGGTGGGCCGGAGACTCAGTTG +
Preference number: 3 (lower is better)
Translates to: FSAEPSAHFGGS*LAVVGGPETQL
Trigger: CAACTGAGTCTCCGGCCCACCTACCACCGCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGCTCAGCAGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CAA 90 bp CCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCAGCACGCTCTCTTGCTTTGCTTGATGATGGACTaGAAGCAGTGCAACGTCCCG +
Preference number: 3 (lower is better)
Translates to: PHERRAQALVQAQHALLLCLMMD*KQCNVP
Trigger: CGGGACGTTGCACTGCTTCAAGTCCATCATCAAGCA...AAGCAAGAGAGCGTGCTGGGCCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR-3UTR CAA 90 bp CAGCCGCGACTTGACCACGTCCACAGGATAGGTAGAGAGCCAGGACACGATGCCCCGAACACCAGCGCGTaGATGAAGGTGAGCCCCATG +
Preference number: 3 (lower is better)
Translates to: QPRLDHVHRIGREPGHDAPNTSA*MKVSPM
Trigger: CATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGG...GGCATCGTGTCCTGGCTCTCTACCTATCCTGTGGACGTGGTCAAGTCGCGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR CCA 72 bp GGGAGCAGAGGGACTGACCTTTGGCTTCTTTGTGGCTaGAGGTGTTCCAGGCCTGGTGAGGGGGTCCCATAC +
Preference number: 3 (lower is better)
Translates to: GSRGTDLWLLCG*RCSRPGEGVPY
Trigger: GTATGGGACCCCCTCACCAGGCCTGGAACACCTCCAGCCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CAA 90 bp GTATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGGCGAAGGTGGCAGCGTaGACGGGGAAGGCGCGCAGC +
Preference number: 3 (lower is better)
Translates to: VCRGSSSVTPGGTPSFPLAKVAA*TGKARS
Trigger: GCTGCGCGCCTTCCCCGTCAACGCTGCCACCTTCGC...CAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392908.7
3UTR-3UTR CAA 90 bp GTTGCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGTGCTTGATGATGGACTaGAAGCAGTGCAACGTCCCG +
Preference number: 3 (lower is better)
Translates to: VALHPEHQRVDEGEPHERCLMMD*KQCNVP
Trigger: CGGGACGTTGCACTGCTTCAAGTCCATCATCAAGCA...CCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR-3UTR CAA 90 bp ATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCAGCACGAGCACGCTCTCTTGCTaGATGATGGACTTGAAGCAG +
Preference number: 3 (lower is better)
Translates to: MKVSPMSGEPRPLYRPSTSTLSC*MMDLKQ
Trigger: CTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCT...CGTGCTGGGCCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR-3UTR CAA 90 bp GCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGAAGCACGCTCTCTTGCTaGATGATGGACTTGAAGCAG +
Preference number: 3 (lower is better)
Translates to: ALHPEHQRVDEGEPHERRSTLSC*MMDLKQ
Trigger: CTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCT...TCGCCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR-3UTR CAA 90 bp AGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGGCCCAGCACGCTCTCTaGCTTGATGATGGACTTGAA +
Preference number: 3 (lower is better)
Translates to: SALMKVSPMSGEPRPLYRAQHAL*LDDGLE
Trigger: TTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGGC...CCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR-3UTR CAA 90 bp GGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACATGGGTGGCCCCTTGGTaGGCCATCAGAGACCCCCGG +
Preference number: 3 (lower is better)
Translates to: GSSSVTPGGTPSFPLSLTWVAPW*AIRDPR
Trigger: CCGGGGGTCTCTGATGGCCAACCAAGGGGCCACCCA...TGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR CAA 90 bp AGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCTGGGTGGCCCCTTGGTaGGCCATCAGAGACCCCCGG +
Preference number: 3 (lower is better)
Translates to: SSVTPGGTPSFPLSLTQTWVAPW*AIRDPR
Trigger: CCGGGGGTCTCTGATGGCCAACCAAGGGGCCACCCA...GGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR-3UTR CAA 90 bp TTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCATCCCTGGGTGGCCCCTaGGTTGGCCATCAGAGACCC +
Preference number: 3 (lower is better)
Translates to: LTVSVQRHQAVQSPVSSSSLGGP*VGHQRP
Trigger: GGGTCTCTGATGGCCAACCAAGGGGCCACCCAGGGA...TGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CAA 90 bp TTCTCTGCTGAGCCCTCTGCACACTTTGGGGGATCCTGGCTGGCGGTGGTAGGTCGGAAGGATTTCTCCTaGCCACAGCTGCATCACACT +
Preference number: 3 (lower is better)
Translates to: FSAEPSAHFGGSWLAVVGRKDFS*PQLHHT
Trigger: AGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCG...ACCTACCACCGCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGCTCAGCAGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR GCA 72 bp AGGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTaGATCACACTTGAACTGTCCAGACCTCCACCGCTG +
Preference number: 3 (lower is better)
Translates to: RPRGGRISPCHS*ITLELSRPPPL
Trigger: CAGCGGTGGAGGTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR GCA 72 bp GGCAGCCTGAGGCCCAGAGGCGGAAGGATTTCTCCTTaGCACAGCTGCATCACACTTGAACTGTCCAGACCT +
Preference number: 3 (lower is better)
Translates to: GSLRPRGGRISP*HSCITLELSRP
Trigger: AGGTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCCTCAGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CAA 90 bp CACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGGTGGCCCACCACCCACAGCTGCATCACACTaGAACTGTCCAGACCTCCAC +
Preference number: 3 (lower is better)
Translates to: HTKFSSVPNTDQRGGPPPTAASH*NCPDLH
Trigger: GTGGAGGTCTGGACAGTTCAAGTGTGATGCAGCTGT...GGGTGGTGGGCCACCCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR CCA 72 bp GAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTaGAGTGTCTGCCTCAGTTTCCAGGATAACGGTGCA +
Preference number: 3 (lower is better)
Translates to: EHNDVARIPERG*SVCLSFQDNGA
Trigger: TGCACCGTTATCCTGGAAACTGAGGCAGACACTCCAGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
3UTR TCA 72 bp CGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTaGACTGTCCAGACCTCCACCGCTGGCCTGTTTGCT +
Preference number: 3 (lower is better)
Translates to: RKDFSLPQLHHT*TVQTSTAGLFA
Trigger: AGCAAACAGGCCAGCGGTGGAGGTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CAA 90 bp AGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACAGGCAGCCTGCGGAAGGATTTCTCCTaGCCACAGCTGCATCACACT +
Preference number: 3 (lower is better)
Translates to: RLSCPSAGHVPILWTGSLRKDFS*PQLHHT
Trigger: AGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCG...CAGGCTGCCTGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR-3UTR CAA 90 bp AGGGTGTTGCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCCATGAACAAAGTTACACTTTaGCTATGGATGGAGACAGCC +
Preference number: 3 (lower is better)
Translates to: RVLPCTPNTSALMKVSPMNKVTL*LWMETA
Trigger: GGCTGTCTCCATCCATAGCAAAAGTGTAACTTTGTT...CATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAACACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556868.1
CDS-3UTR TCA 90 bp CGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGTGGCCCAGGGCCCGTCCCTCGGCGGCAGCTaGCTCGCTGGATCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: RRRTCQELVEGRVVAQGPSLGGS*LAGSPP
Trigger: CGGAGGGGATCCAGCGAGTCAGCTGCCGCCGAGGGA...CGGGCCCTGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR GCA 90 bp GGCCAGCTCCATGGGGCAGCAGATGACGCACTGGATGGCGCCCGCCGCCGCACCGCACGCAGTCCAGGATaGCGCGGTAGCGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GQLHGAADDALDGARRRTARSPG*RGSAGR
Trigger: GCGCCCCGCGCTACCGCGGCATCCTGGACTGCGTGC...GGTGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGCTGCCCCATGGAGCTGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554224.5
CDS-3UTR CCA 90 bp CAACAGCAGCTTGGGCACCAGCAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGAGAAGTCCAGCGCCATaGCCGGGTCCCCGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: QQQLGHQQAVARLAAQRPRSPAP*PGPRRG
Trigger: GCCTCGCCGGGGACCCGGCCATGGCGCTGGACTTCT...CGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTGCTGGTGCCCAAGCTGCTGTTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CCA 90 bp CAGCAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGCGTGAGAGCGTCATAGGTCGGCAGCTGACTCGCTaGATCCCCTCCGGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: QQAVARLAAQRPRESVIGRQLTR*IPSGPR
Trigger: CCGCGGGCCGGAGGGGATCCAGCGAGTCAGCTGCCG...ACCTATGACGCTCTCACGCGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR GCA 90 bp GGCGCCCGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGTGGCCCAGGGGCCCGGAGGGTGTTaGCCTGCACCCCGAACACCA +
Preference number: 4 (lower is better)
Translates to: GARRRTCQELVEGRVVAQGPGGC*PAPRTP
Trigger: TGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCC...CTGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR GCA 90 bp CAGCAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGCGTGAGAGCGTCATAGGTCCCGCGTCCTGCAGCTaGAGCCGCGTCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QQAVARLAAQRPRESVIGPASCS*SRVLAS
Trigger: GCTGGCCAAGACGCGGCTGCAGCTGCAGGACGCGGG...ACCTATGACGCTCTCACGCGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTGCTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
CDS-3UTR GCA 90 bp ATGGCGCCCGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGTGGCCCGCGAGCCCTTGTAGGTaGGCGCTGGGCCCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: MAPAAAPARNWLRGESWPASPCR*ALGPRP
Trigger: AGGACGCGGGCCCAGCGCGCACCTACAAGGGCTCGC...GGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCCAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CCA 90 bp CACTGGATGGCGCCCGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGCGGCAGCTGACTCGCTaGATCCCCTCCGGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: HWMAPAAAPARNWLRGESRQLTR*IPSGPR
Trigger: CCGCGGGCCGGAGGGGATCCAGCGAGTCAGCTGCCG...CGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCCATCCAGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR TCA 90 bp CGGCTCGCAGCCCAGCGCCCGCGTGAGAGCGTCATAGGTGAGGAAGTAGACGCCTCCTCGTCCTCCCCCTaGGGCCCCTCGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLAAQRPRESVIGEEVDASSSSP*GPSPGW
Trigger: CCAGCCCGGCGAGGGGCCTCAGGGGGAGGACGAGGA...GGCGTCTACTTCCTCACCTATGACGCTCTCACGCGGGCGCTGGGCTGCGAGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
CDS-3UTR GCA 90 bp GGCCAGCTCCATGGGGCAGCAGATGACGCACTGGATGGCGCCCGCCGCCGCACCCGGAGGGTGTTGCCCTaGACCCCGAACACCAGCGCG +
Preference number: 4 (lower is better)
Translates to: GQLHGAADDALDGARRRTRRVLP*TPNTSA
Trigger: CGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCG...GGTGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGCTGCCCCATGGAGCTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR GCA 90 bp ATGGCGCCCGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGTGGCCCCGGAGGGTGTTGCCCTaGACCCCGAACACCAGCGCG +
Preference number: 4 (lower is better)
Translates to: MAPAAAPARNWLRGESWPRRVLP*TPNTSA
Trigger: CGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCG...GGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR GCA 90 bp CACTGGATGGCGCCCGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGGCCCGCCGCCGCACCTaGCAGGAACTGGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: HWMAPAAAPARNWLRGESARRRT*QELVEG
Trigger: CCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGC...CGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCCATCCAGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR GCA 90 bp CTGGATGGCGCCCGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGTGGCTGGGCCCGCGTCCTaGAGCTGCAGCCGCGTCTTG +
Preference number: 4 (lower is better)
Translates to: LDGARRRTCQELVEGRVVAGPAS*SCSRVL
Trigger: CAAGACGCGGCTGCAGCTGCAGGACGCGGGCCCAGC...CACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCCATCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CCA 90 bp CGCGCCAGCCCTCGGCGCGGTAGCTCTGGTGCACGCAGTCCAGGATGCCGCGGTAGGCGCGGTCAGGGATaGTGGGGATGGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RASPRRGSSGARSPGCRGRRGQG*WGWRQQ
Trigger: CTGCTGCCGCCATCCCCACCATCCCTGACCGCGCCT...ACCGCGGCATCCTGGACTGCGTGCACCAGAGCTACCGCGCCGAGGGCTGGCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392908.7
ENST00000554224.5
CDS-3UTR CCA 90 bp CAGCAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGCGTGAGAGCGTCATAGGTCAGCAGATGACGCACTaGATGGCGCCCGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: QQAVARLAAQRPRESVIGQQMTH*MAPAAA
Trigger: TGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGCTG...ACCTATGACGCTCTCACGCGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CCA 90 bp CAGCAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGCGTGAGAGCGTCATAGGTCTTGTAGGTGCGCGCTaGGCCCGCGTCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QQAVARLAAQRPRESVIGLVGAR*ARVLQL
Trigger: CAGCTGCAGGACGCGGGCCCAGCGCGCACCTACAAG...ACCTATGACGCTCTCACGCGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
CDS-3UTR TCA 90 bp AGGGCCCGGAGGGTGTTGCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGTCCTCGTCCTCCCCCTaGGGCCCCTCGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RARRVLPCTPNTSALMKVSSSSP*GPSPGW
Trigger: CCAGCCCGGCGAGGGGCCTCAGGGGGAGGACGAGGA...CACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR GCA 90 bp GTGGCCCAGGGCCCGGAGGGTGTTGCCCTGCACCCCGAACACCAGCGCGTTGATCCCGCGTCCTGCAGCTaGAGCCGCGTCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VAQGPEGVALHPEHQRVDPASCS*SRVLAS
Trigger: GCTGGCCAAGACGCGGCTGCAGCTGCAGGACGCGGG...ATCAACGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCTGGGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR GCA 90 bp GTGGCCCAGGGCCCGGAGGGTGTTGCCCTGCACCCCGAACACCAGCGCGTTGATGCTGGGCCCGCGTCCTaGAGCTGCAGCCGCGTCTTG +
Preference number: 4 (lower is better)
Translates to: VAQGPEGVALHPEHQRVDAGPAS*SCSRVL
Trigger: CAAGACGCGGCTGCAGCTGCAGGACGCGGGCCCAGC...ATCAACGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCTGGGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR GCA 90 bp CGGCTCGCAGCCCAGCGCCCGCGTGAGAGCGTCATAGGTGAGGAAGTAGACGCCGCACGCAGTCCAGGATaGCGCGGTAGCGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: RLAAQRPRESVIGEEVDAARSPG*RGSAGR
Trigger: GCGCCCCGCGCTACCGCGGCATCCTGGACTGCGTGC...GGCGTCTACTTCCTCACCTATGACGCTCTCACGCGGGCGCTGGGCTGCGAGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392908.7
ENST00000554224.5
CDS-3UTR GCA 90 bp CAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGCGTGAGAGCGTCATAGGTGAGTGGCTTCCCGGAGGGTaGAGGGTCCCCAGTTCACCC +
Preference number: 4 (lower is better)
Translates to: QAVARLAAQRPRESVIGEWLPGG*RVPSSP
Trigger: GGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCA...CTCACCTATGACGCTCTCACGCGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392908.7
CDS-3UTR CCA 90 bp CTGGATGGCGCCCGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGTGAGGCGCGGTCAGGGATaGTGGGGATGGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LDGARRRTCQELVEGRVVRRGQG*WGWRQQ
Trigger: CTGCTGCCGCCATCCCCACCATCCCTGACCGCGCCT...CACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCCATCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CCA 90 bp ACCGTGACGGTGGCGAAGGTGGCAGCGTTGACGGGGAAGGCGCGCAGCAGCGTGAGAAGTCCAGCGCCATaGCCGGGTCCCCGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: TVTVAKVAALTGKARSSVRSPAP*PGPRRG
Trigger: GCCTCGCCGGGGACCCGGCCATGGCGCTGGACTTCT...CACGCTGCTGCGCGCCTTCCCCGTCAACGCTGCCACCTTCGCCACCGTCACGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392908.7
CDS-3UTR CCA 90 bp ACCGTGACGGTGGCGAAGGTGGCAGCGTTGACGGGGAAGGCGCGCAGCAGCGTGTTGAGGGGCGAGTCGTaGCCCAGGGCCCGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: TVTVAKVAALTGKARSSVLRGES*PRARRV
Trigger: CACCCTCCGGGCCCTGGGCCACGACTCGCCCCTCAA...CACGCTGCTGCGCGCCTTCCCCGTCAACGCTGCCACCTTCGCCACCGTCACGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392908.7
CDS-3UTR CCA 90 bp GGCGCCCGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGTGGCCCAGGCACCTGCCAGGAACTaGTTGAGGGGCGAGTCGTGG +
Preference number: 4 (lower is better)
Translates to: GARRRTCQELVEGRVVAQAPARN*LRGESW
Trigger: CCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGC...CTGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CCA 90 bp CAACAGCAGCTTGGGCACCAGCAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGGCTGGCGGTGGTAGGTaGGCCGGAGACTCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: QQQLGHQQAVARLAAQRPAGGGR*AGDSVV
Trigger: GACAACTGAGTCTCCGGCCCACCTACCACCGCCAGC...CGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTGCTGGTGCCCAAGCTGCTGTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392908.7
3UTR CAA 72 bp GTGAGCACCACCGTGACGGTGGCGAAGGTGGCAGCGTaGACGGGGAAGGCGCGCAGCAGCGTGGACGCCAGC +
Preference number: 4 (lower is better)
Translates to: VSTTVTVAKVAA*TGKARSSVDAS
Trigger: GCTGGCGTCCACGCTGCTGCGCGCCTTCCCCGTCAACGCTGCCACCTTCGCCACCGTCACGGTGGTGCTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392908.7
CDS-3UTR TCA 90 bp AGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGTCCTCGTCCTCCCCCTaGGGCCCCTCGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SALMKVSPMSGEPRPLYRSSSSP*GPSPGW
Trigger: CCAGCCCGGCGAGGGGCCTCAGGGGGAGGACGAGGA...CCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGCGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR TCA 90 bp CAGCAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGCGTGAGAGCGTCATAGGTAACGTCCCGCGGTACTaGGGCTTCTCCACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QQAVARLAAQRPRESVIGNVPRY*GFSTLW
Trigger: CCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTT...ACCTATGACGCTCTCACGCGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
CDS-3UTR TCA 90 bp GCGTTGACGGGGAAGGCGCGCAGCAGCGTGGACGCCAGCCCCCGTGTGAAGACGCTGCCAGGAACTGGTTaGGGGGCGAGTCGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ALTGKARSSVDASPRVKTLPGTG*GASRGP
Trigger: TGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAG...CGTCTTCACACGGGGGCTGGCGTCCACGCTGCTGCGCGCCTTCCCCGTCAACGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000392908.7
CDS-3UTR TCA 90 bp GTGGCCCAGGGCCCGGAGGGTGTTGCCCTGCACCCCGAACACCAGCGCGTTGATCCATGGGGCAGCAGATaGCGCACTGGATGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: VAQGPEGVALHPEHQRVDPWGSR*RTGWRP
Trigger: CGGGCGCCATCCAGTGCGTCATCTGCTGCCCCATGG...ATCAACGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCTGGGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR TCA 90 bp CAGCAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGCGTGAGAGCGTCATAGGTCCTGCAGCCGCGACTTaGCCACGTCCACAGGATAGG +
Preference number: 4 (lower is better)
Translates to: QQAVARLAAQRPRESVIGPAAAT*PRPQDR
Trigger: CCTATCCTGTGGACGTGGTCAAGTCGCGGCTGCAGG...ACCTATGACGCTCTCACGCGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
CDS-3UTR GCA 90 bp CGTGCCCGTAGATCTGCGCGAGGCAGTCCAGCGAGCCCTTGTAGGTGCGCGCTGGCCCGCCGCCGCACCTaGCAGGAACTGGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: RARRSARGSPASPCRCALARRRT*QELVEG
Trigger: CCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGC...CAGCGCGCACCTACAAGGGCTCGCTGGACTGCCTCGCGCAGATCTACGGGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR GCA 90 bp AGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCAGCACGCTCTCTTGCGCGAGCCCTTGTAGGTaGGCGCTGGGCCCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: SPMSGEPRPLYRPSTLSCASPCR*ALGPRP
Trigger: AGGACGCGGGCCCAGCGCGCACCTACAAGGGCTCGC...GCAAGAGAGCGTGCTGGGCCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CCA 90 bp CAGCAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGCGTGAGAGCGTCATAGGTCACTTTGGGGGATCCTaGCTGGCGGTGGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: QQAVARLAAQRPRESVIGHFGGS*LAVVGG
Trigger: CCCACCTACCACCGCCAGCCAGGATCCCCCAAAGTG...ACCTATGACGCTCTCACGCGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392908.7
CDS-3UTR TCA 90 bp GTGGCCCAGGGCCCGGAGGGTGTTGCCCTGCACCCCGAACACCAGCGCGTTGATACACCATGCCCCGGTTaGCGCCACGCAGACCCTCGT +
Preference number: 4 (lower is better)
Translates to: VAQGPEGVALHPEHQRVDTPCPG*RHADPR
Trigger: ACGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGT...ATCAACGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCTGGGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR TCA 90 bp TGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCAACGCCAGCCCCCGTGTaGAGACGCGCCAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: WCLQQTPWLPGGCRVPSSTPAPV*RRASPR
Trigger: CCGAGGGCTGGCGCGTCTTCACACGGGGGCTGGCGT...TGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp GCCAGCCTGCAGGGCAGGAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTACGCCAGCCCCCGTGTaGAGACGCGCCAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: ASLQGRSTMTWPGSQKGATPAPV*RRASPR
Trigger: CCGAGGGCTGGCGCGTCTTCACACGGGGGCTGGCGT...AGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCTGCAGGCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp GGACACCATGCCCCGGTTGACGCCACGCAGACCCTCGTGCCCGTAGATCTGCGCCGGAGGGTGTTGCCCTaGACCCCGAACACCAGCGCG +
Preference number: 4 (lower is better)
Translates to: GHHAPVDATQTLVPVDLRRRVLP*TPNTSA
Trigger: CGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCG...GCGCAGATCTACGGGCACGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR GCA 90 bp CAGCAACGTGGACACCATGCCCCGGTTGACGCCACGCAGACCCTCGTGCCCGTAGCTGGGCCCGCGTCCTaGAGCTGCAGCCGCGTCTTG +
Preference number: 4 (lower is better)
Translates to: QQRGHHAPVDATQTLVPVAGPAS*SCSRVL
Trigger: CAAGACGCGGCTGCAGCTGCAGGACGCGGGCCCAGC...TACGGGCACGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGTCCACGTTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR GCA 90 bp CCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACCCTCCCCCAGGACGCCTGGTaGAGCCCTCCTCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PPADSMASRRVQGPQFTLPQDAW*SPPLPQ
Trigger: CTGGGGCAGAGGAGGGCTGCACCAGGCGTCCTGGGG...GAGGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp GCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGAAGAAGTCCAGCGCCATaGCCGGGTCCCCGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: ALHPEHQRVDEGEPHERRRSPAP*PGPRRG
Trigger: GCCTCGCCGGGGACCCGGCCATGGCGCTGGACTTCT...TCGCCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CCA 90 bp CAGCAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGCGTGAGAGCGTCATAGGTAGTAGACGCCGAAGCTaGGCGTCTCACGCAGCAACG +
Preference number: 4 (lower is better)
Translates to: QQAVARLAAQRPRESVIGSRRRS*ASHAAT
Trigger: CGTTGCTGCGTGAGACGCCCAGCTTCGGCGTCTACT...ACCTATGACGCTCTCACGCGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CCA 90 bp CACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACGGCAGCTGACTCGCTaGATCCCCTCCGGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: HQRVDEGEPHERRAQALVRQLTR*IPSGPR
Trigger: CCGCGGGCCGGAGGGGATCCAGCGAGTCAGCTGCCG...TACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR TCA 90 bp GCCTCAGTTTCCAGGATAACGGTGCAATGGCCTCAGCCAGGCCAGGTGCTGGCTTCCTCGTCCTCCCCCTaGGGCCCCTCGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ASVSRITVQWPQPGQVLASSSSP*GPSPGW
Trigger: CCAGCCCGGCGAGGGGCCTCAGGGGGAGGACGAGGA...AGCCAGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359232.8
ENST00000392908.7
CDS-3UTR TCA 90 bp CGTGCCCGTAGATCTGCGCGAGGCAGTCCAGCGAGCCCTTGTAGGTGCGCGCTGCTGCCAGGAACTGGTTaGGGGGCGAGTCGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RARRSARGSPASPCRCALLPGTG*GASRGP
Trigger: TGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAG...CAGCGCGCACCTACAAGGGCTCGCTGGACTGCCTCGCGCAGATCTACGGGCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR TCA 90 bp CACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTATCCCTCGGCGGCAGCTaGCTCGCTGGATCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: HQRVDEGEPHERRAQALVSLGGS*LAGSPP
Trigger: CGGAGGGGATCCAGCGAGTCAGCTGCCGCCGAGGGA...TACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR TCA 90 bp GCAGTGCAACGTCCCGCGGTACTGAGGCTTCTCCACGCTCTGGACCTGAAGCCGTCCCTCGGCGGCAGCTaGCTCGCTGGATCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: AVQRPAVLRLLHALDLKPSLGGS*LAGSPP
Trigger: CGGAGGGGATCCAGCGAGTCAGCTGCCGCCGAGGGA...CGGCTTCAGGTCCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTTGCACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR GCA 90 bp ATGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCCCCGCGTCCTGCAGCTaGAGCCGCGTCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: MVPPADSMASRRVQGPQFPASCS*SRVLAS
Trigger: GCTGGCCAAGACGCGGCTGCAGCTGCAGGACGCGGG...GAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp AGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCGCGTCCTGCAGCTaGAGCCGCGTCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SALMKVSPMSGEPRPLYRPASCS*SRVLAS
Trigger: GCTGGCCAAGACGCGGCTGCAGCTGCAGGACGCGGG...CCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR GCA 90 bp CAGCCTGCAGGGCAGGAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTGGGCTGGGCCCGCGTCCTaGAGCTGCAGCCGCGTCTTG +
Preference number: 4 (lower is better)
Translates to: QPAGQEHNDVARIPERGWAGPAS*SCSRVL
Trigger: CAAGACGCGGCTGCAGCTGCAGGACGCGGGCCCAGC...CCAGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCTGCAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp CCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCGCAGTCCGTCCGCCTaGAGCCGCGACTTGACCACG +
Preference number: 4 (lower is better)
Translates to: PCTPNTSALMKVSPMSGERSPSA*SRDLTT
Trigger: CGTGGTCAAGTCGCGGCTGCAGGCGGACGGACTGCG...CTCGCCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CCA 90 bp CAGCAACGTGGACACCATGCCCCGGTTGACGCCACGCAGACCCTCGTGCCCGTAAGGCGCGGTCAGGGATaGTGGGGATGGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QQRGHHAPVDATQTLVPVRRGQG*WGWRQQ
Trigger: CTGCTGCCGCCATCCCCACCATCCCTGACCGCGCCT...TACGGGCACGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGTCCACGTTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CCA 90 bp GGAAGTAGACGCCGAAGCTGGGCGTCTCACGCAGCAACGTGGACACCATGCCCCTTGAGGGGCGAGTCGTaGCCCAGGGCCCGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GSRRRSWASHAATWTPCPLRGES*PRARRV
Trigger: CACCCTCCGGGCCCTGGGCCACGACTCGCCCCTCAA...GGGGCATGGTGTCCACGTTGCTGCGTGAGACGCCCAGCTTCGGCGTCTACTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CCA 90 bp CAGCCTGCAGGGCAGGAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTGGTTGAGGGGCGAGTCGTaGCCCAGGGCCCGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: QPAGQEHNDVARIPERGWLRGES*PRARRV
Trigger: CACCCTCCGGGCCCTGGGCCACGACTCGCCCCTCAA...CCAGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCTGCAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp GTTGCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGTTGAGGGGCGAGTCGTaGCCCAGGGCCCGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VALHPEHQRVDEGEPHERLRGES*PRARRV
Trigger: CACCCTCCGGGCCCTGGGCCACGACTCGCCCCTCAA...CCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CCA 90 bp GCGCGCGTAGGTGAGCACCACCGTGACGGTGGCGAAGGTGGCAGCGTTGACGGGGCACCTGCCAGGAACTaGTTGAGGGGCGAGTCGTGG +
Preference number: 4 (lower is better)
Translates to: ARVGEHHRDGGEGGSVDGAPARN*LRGESW
Trigger: CCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGC...CCCGTCAACGCTGCCACCTTCGCCACCGTCACGGTGGTGCTCACCTACGCGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392908.7
CDS-3UTR CCA 90 bp GCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCCTTGTAGGTGCGCGCTaGGCCCGCGTCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ALMKVSPMSGEPRPLYRPLVGAR*ARVLQL
Trigger: CAGCTGCAGGACGCGGGCCCAGCGCGCACCTACAAG...GGGCCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CCA 90 bp CTGGGCGTCTCACGCAGCAACGTGGACACCATGCCCCGGTTGACGCCACGCAGACCGCCAACAGCAGCTTaGGCACCAGCAGGCGGTCGC +
Preference number: 4 (lower is better)
Translates to: LGVSRSNVDTMPRLTPRRPPTAA*APAGGR
Trigger: GCGACCGCCTGCTGGTGCCCAAGCTGCTGTTGGCGG...TCTGCGTGGCGTCAACCGGGGCATGGTGTCCACGTTGCTGCGTGAGACGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CCA 90 bp GCGCGCGTAGGTGAGCACCACCGTGACGGTGGCGAAGGTGGCAGCGTTGACGGGAGGAGTGGCAGCAGCTaGGGTACCCCTAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: ARVGEHHRDGGEGGSVDGRSGSS*GTPSSG
Trigger: GCCACTGCTAGGGGTACCCCAGCTGCTGCCACTCCT...CCCGTCAACGCTGCCACCTTCGCCACCGTCACGGTGGTGCTCACCTACGCGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392908.7
CDS-3UTR CCA 90 bp GCCACCCCTGTGCCCACTAGCAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGCCACGTCAGCAGCTCTaGGGCCTGGGGCGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ATPVPTSRPCAFTGMKPWPRQQL*GLGRWS
Trigger: TGACCAGCGCCCCAGGCCCCAGAGCTGCTGACGTGG...CCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTGCTAGTGGGCACAGGGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
3UTR CAA 72 bp CGGAGGGTGTTGCCCTGCACCCCGAACACCAGCGCGTaGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RRVLPCTPNTSA*MKVSPMSGEPR
Trigger: CCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
3UTR CAA 72 bp TTGAGGGGCGAGTCGTGGCCCAGGGCCCGGAGGGTGTaGCCCTGCACCCCGAACACCAGCGCGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: LRGESWPRARRV*PCTPNTSALMK
Trigger: CTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCTGGGCCACGACTCGCCCCTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR TCA 90 bp ATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCAGCACGCTGCCAGGAACTGGTTaGGGGGCGAGTCGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: MKVSPMSGEPRPLYRPSTLPGTG*GASRGP
Trigger: TGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAG...CGTGCTGGGCCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR TCA 90 bp GTTGCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCCATGGGGCAGCAGATaGCGCACTGGATGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: VALHPEHQRVDEGEPHERPWGSR*RTGWRP
Trigger: CGGGCGCCATCCAGTGCGTCATCTGCTGCCCCATGG...CCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR TCA 90 bp GATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCAGCACCCAGGACACGATGCCTaGCGTACCGCCCGCCAACAG +
Preference number: 4 (lower is better)
Translates to: DEGEPHERRAQALVQAQHPGHDA*RTARQQ
Trigger: CTGTTGGCGGGCGGTACGTCAGGCATCGTGTCCTGG...GTGCTGGGCCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR TCA 90 bp AGCCGCGTCTTGGCCAGCTCCATGGGGCAGCAGATGACGCACTGGATGGCGCCCCCTGCAGCCGCGACTTaGCCACGTCCACAGGATAGG +
Preference number: 4 (lower is better)
Translates to: SRVLASSMGQQMTHWMAPPAAAT*PRPQDR
Trigger: CCTATCCTGTGGACGTGGTCAAGTCGCGGCTGCAGG...GGGCGCCATCCAGTGCGTCATCTGCTGCCCCATGGAGCTGGCCAAGACGCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR TCA 90 bp GCCAGCCTGCAGGGCAGGAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTCGAAGGTGGCAGCGTTaGCGGGGAAGGCGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: ASLQGRSTMTWPGSQKGARRWQR*RGRRAA
Trigger: TGCTGCGCGCCTTCCCCGTCAACGCTGCCACCTTCG...AGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCTGCAGGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp TGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACGAAGGTGGCAGCGTTaGCGGGGAAGGCGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: WCLQQTPWLPGGCRVPSSRRWQR*RGRRAA
Trigger: TGCTGCGCGCCTTCCCCGTCAACGCTGCCACCTTCG...TGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp CAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGCACTGAGAATGCCTGGGAGGGGAAGGAGGGCGGGGTaGGCGTCACAGGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: QALCLHRDEALALRMPGRGRRAG*ASQAGG
Trigger: CCCTCCAGCCTGTGACGCTCACCCCGCCCTCCTTCC...CCTCCCAGGCATTCTCAGTGCCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp CGTAGATCTGCGCGAGGCAGTCCAGCGAGCCCTTGTAGGTGCGCGCTGGGCCCGTCCACGCTCTGGACCTaGAGCCGTACTAGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: RRSARGSPASPCRCALGPSTLWT*SRTSAL
Trigger: GAGAGCGCTAGTACGGCTTCAGGTCCAGAGCGTGGA...CGGGCCCAGCGCGCACCTACAAGGGCTCGCTGGACTGCCTCGCGCAGATCTACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR TCA 90 bp GAGGCAGTCCAGCGAGCCCTTGTAGGTGCGCGCTGGGCCCGCGTCCTGCAGCTGATGGAGACAGCCCCTTaGCCGTGTCAAACGGGTGTC +
Preference number: 4 (lower is better)
Translates to: EAVQRALVGARWARVLQLMETAP*PCQTGV
Trigger: GACACCCGTTTGACACGGTCAAGGGGCTGTCTCCAT...CAGCTGCAGGACGCGGGCCCAGCGCGCACCTACAAGGGCTCGCTGGACTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR GCA 90 bp CTCGTGCCCGTAGATCTGCGCGAGGCAGTCCAGCGAGCCCTTGTAGGTGCGCGCAGAGCCAGGACACGATaGCTGACGTACCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LVPVDLREAVQRALVGARRARTR*LTYRPP
Trigger: TGGCGGGCGGTACGTCAGGCATCGTGTCCTGGCTCT...GCGCGCACCTACAAGGGCTCGCTGGACTGCCTCGCGCAGATCTACGGGCACGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR GCA 90 bp AAGCCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTGCACGCAGTCCAGGATaGCGCGGTAGCGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: KPSVVFTEHIPQDAWCSPARSPG*RGSAGR
Trigger: GCGCCCCGCGCTACCGCGGCATCCTGGACTGCGTGC...AGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp TGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACTTGTAGGTGCGCGCTaGGCCCGCGTCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: WCLQQTPWLPGGCRVPSSLVGAR*ARVLQL
Trigger: CAGCTGCAGGACGCGGGCCCAGCGCGCACCTACAAG...TGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACTTGTAGGTGCGCGCTaGGCCCGCGTCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HQRVDEGEPHERRAQALVLVGAR*ARVLQL
Trigger: CAGCTGCAGGACGCGGGCCCAGCGCGCACCTACAAG...TACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR TCA 90 bp AGGGTGTTGCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCCATGCCATGGGGCAGCAGATaGCGCACTGGATGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: RVLPCTPNTSALMKVSPMPWGSR*RTGWRP
Trigger: CGGGCGCCATCCAGTGCGTCATCTGCTGCCCCATGG...CATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAACACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR TCA 90 bp GCCAGCCTGCAGGGCAGGAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTACACCATGCCCCGGTTaGCGCCACGCAGACCCTCGT +
Preference number: 4 (lower is better)
Translates to: ASLQGRSTMTWPGSQKGATPCPG*RHADPR
Trigger: ACGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGT...AGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCTGCAGGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp ATGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACACCATGCCCCGGTTaGCGCCACGCAGACCCTCGT +
Preference number: 4 (lower is better)
Translates to: MVPPADSMASRRVQGPQFTPCPG*RHADPR
Trigger: ACGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGT...GAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp GTTGCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGACACCATGCCCCGGTTaGCGCCACGCAGACCCTCGT +
Preference number: 4 (lower is better)
Translates to: VALHPEHQRVDEGEPHERTPCPG*RHADPR
Trigger: ACGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGT...CCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR TCA 90 bp AGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCAGGACACGATGCCTaGCGTACCGCCCGCCAACAG +
Preference number: 4 (lower is better)
Translates to: SALMKVSPMSGEPRPLYRPGHDA*RTARQQ
Trigger: CTGTTGGCGGGCGGTACGTCAGGCATCGTGTCCTGG...CCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR TCA 90 bp CAGCCGCGTCTTGGCCAGCTCCATGGGGCAGCAGATGACGCACTGGATGGCGCCTCCACGCTCTGGACCTaGAGCCGTACTAGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: QPRLGQLHGAADDALDGASTLWT*SRTSAL
Trigger: GAGAGCGCTAGTACGGCTTCAGGTCCAGAGCGTGGA...GGCGCCATCCAGTGCGTCATCTGCTGCCCCATGGAGCTGGCCAAGACGCGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR GCA 90 bp CCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCCTCGGAGGGTGTTGCCCTaGACCCCGAACACCAGCGCG +
Preference number: 4 (lower is better)
Translates to: PSVVFTEHIPQDAWCSPPRRVLP*TPNTSA
Trigger: CGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCG...AGGAGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp TTCTCTGCTGAGCCCTCTGCACACTTTGGGGGATCCTGGCTGGCGGTGGTAGGTGCGAGCCCTTGTAGGTaGGCGCTGGGCCCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: FSAEPSAHFGGSWLAVVGASPCR*ALGPRP
Trigger: AGGACGCGGGCCCAGCGCGCACCTACAAGGGCTCGC...ACCTACCACCGCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGCTCAGCAGAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp GCAACGTCCCGCGGTACTGAGGCTTCTCCACGCTCTGGACCTGAAGCCGTACTAGCGAGCCCTTGTAGGTaGGCGCTGGGCCCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: ATSRGTEASPRSGPEAVLASPCR*ALGPRP
Trigger: AGGACGCGGGCCCAGCGCGCACCTACAAGGGCTCGC...TAGTACGGCTTCAGGTCCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR GCA 90 bp GCCAGCCTGCAGGGCAGGAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTTGGCTTCCCGGAGGGTaGAGGGTCCCCAGTTCACCC +
Preference number: 4 (lower is better)
Translates to: ASLQGRSTMTWPGSQKGAWLPGG*RVPSSP
Trigger: GGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCA...AGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCTGCAGGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp GCCACCCCTGTGCCCACTAGCAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGACCCTCCCTGTCCCCTaGTACGGAGGGAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: ATPVPTSRPCAFTGMKPWTLPVP*YGGNSG
Trigger: CCCAGAGTTCCCTCCGTAGCAGGGGACAGGGAGGGT...CCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTGCTAGTGGGCACAGGGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp CCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACCCTCAGCTCCCGGGTCTGGTaGTTAGGCTGCCTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PPADSMASRRVQGPQFTLSSRVW*LGCLGG
Trigger: CCCTCCTAGGCAGCCTAAGCACCAGACCCGGGAGCT...GAGGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp CAGCCGCGACTTGACCACGTCCACAGGATAGGTAGAGAGCCAGGACACGATGCCAGAAGTCCAGCGCCATaGCCGGGTCCCCGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: QPRLDHVHRIGREPGHDARSPAP*PGPRRG
Trigger: GCCTCGCCGGGGACCCGGCCATGGCGCTGGACTTCT...GGCATCGTGTCCTGGCTCTCTACCTATCCTGTGGACGTGGTCAAGTCGCGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CCA 90 bp CCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCCTCCGCCAACAGCAGCTTaGGCACCAGCAGGCGGTCGC +
Preference number: 4 (lower is better)
Translates to: PSVVFTEHIPQDAWCSPPPPTAA*APAGGR
Trigger: GCGACCGCCTGCTGGTGCCCAAGCTGCTGTTGGCGG...AGGAGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp AGCCCTGGCACTGAGAATGCCTGGGAGGCACCGTTTGCTGGGGAGCAGAGGGACCCCTGGGTGGCCCCTTaGTTGGCCATCAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: SPGTENAWEAPFAGEQRDPWVAP*LAIRDP
Trigger: GGGGTCTCTGATGGCCAACCAAGGGGCCACCCAGGG...GTCCCTCTGCTCCCCAGCAAACGGTGCCTCCCAGGCATTCTCAGTGCCAGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR CAA 72 bp ATGTGTGGAGTTAGAGGTCCCTGGGTGGCCCCTTGGTaGGCCATCAGAGACCCCCGGGAGCCAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: MCGVRGPWVAPW*AIRDPREPACR
Trigger: CCTGCAGGCTGGCTCCCGGGGGTCTCTGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp GCCAGCCTGCAGGGCAGGAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTAACGTCCCGCGGTACTaGGGCTTCTCCACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ASLQGRSTMTWPGSQKGANVPRY*GFSTLW
Trigger: CCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTT...AGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCTGCAGGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp GGGAGGCACCGTTTGCTGGGGAGCAGAGGGACTGACCTTTGGCTTCTTTGTGGCCCATGGGGCAGCAGATaGCGCACTGGATGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: GRHRLLGSRGTDLWLLCGPWGSR*RTGWRP
Trigger: CGGGCGCCATCCAGTGCGTCATCTGCTGCCCCATGG...GCCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp AGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCTGCAGCCGCGACTTaGCCACGTCCACAGGATAGG +
Preference number: 4 (lower is better)
Translates to: SALMKVSPMSGEPRPLYRPAAAT*PRPQDR
Trigger: CCTATCCTGTGGACGTGGTCAAGTCGCGGCTGCAGG...CCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR TCA 90 bp CAGCCTGCAGGGCAGGAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTGGCCTGCAGCCGCGACTTaGCCACGTCCACAGGATAGG +
Preference number: 4 (lower is better)
Translates to: QPAGQEHNDVARIPERGWPAAAT*PRPQDR
Trigger: CCTATCCTGTGGACGTGGTCAAGTCGCGGCTGCAGG...CCAGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCTGCAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp GCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGATCCACGCTCTGGACCTaGAGCCGTACTAGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: ALHPEHQRVDEGEPHERRSTLWT*SRTSAL
Trigger: GAGAGCGCTAGTACGGCTTCAGGTCCAGAGCGTGGA...TCGCCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR GCA 90 bp GGAGGATGTGTGGAGTTAGAGGTCCCTGGGTGGCCCCTTGGTTGGCCATCAGAGCGGAGGGTGTTGCCCTaGACCCCGAACACCAGCGCG +
Preference number: 4 (lower is better)
Translates to: GGCVELEVPGWPLGWPSERRVLP*TPNTSA
Trigger: CGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCG...CTCTGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACATCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp CAGCCGCGACTTGACCACGTCCACAGGATAGGTAGAGAGCCAGGACACGATGCCGGGCCCGGAGGGTGTTaGCCTGCACCCCGAACACCA +
Preference number: 4 (lower is better)
Translates to: QPRLDHVHRIGREPGHDAGPGGC*PAPRTP
Trigger: TGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCC...GGCATCGTGTCCTGGCTCTCTACCTATCCTGTGGACGTGGTCAAGTCGCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
CDS-3UTR GCA 90 bp GCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGCCCGCCGCCGCACCTaGCAGGAACTGGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: ATPGCAKPSVVFTEHIPQARRRT*QELVEG
Trigger: CCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGC...CTGGGGAATGTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp CACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGGTGGCCCACCACCCGCCCGCCGCCGCACCTaGCAGGAACTGGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: HTKFSSVPNTDQRGGPPPARRRT*QELVEG
Trigger: CCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGC...GGGTGGTGGGCCACCCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp CGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCCCCGCGTCCTGCAGCTaGAGCCGCGTCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RSIPAGSRAIDSGANLCPPASCS*SRVLAS
Trigger: GCTGGCCAAGACGCGGCTGCAGCTGCAGGACGCGGG...GGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp CACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGGTGGCCCACCACCCGCTGGGCCCGCGTCCTaGAGCTGCAGCCGCGTCTTG +
Preference number: 4 (lower is better)
Translates to: HTKFSSVPNTDQRGGPPPAGPAS*SCSRVL
Trigger: CAAGACGCGGCTGCAGCTGCAGGACGCGGGCCCAGC...GGGTGGTGGGCCACCCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp TTGCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCAGAGCCAGGACACGATaGCTGACGTACCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LPCTPNTSALMKVSPMSGRARTR*LTYRPP
Trigger: TGGCGGGCGGTACGTCAGGCATCGTGTCCTGGCTCT...GCCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CCA 90 bp GCCTCAGTTTCCAGGATAACGGTGCAATGGCCTCAGCCAGGCCAGGTGCTGGCTAGGCGCGGTCAGGGATaGTGGGGATGGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ASVSRITVQWPQPGQVLARRGQG*WGWRQQ
Trigger: CTGCTGCCGCCATCCCCACCATCCCTGACCGCGCCT...AGCCAGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359232.8
ENST00000392908.7
CDS-3UTR CCA 90 bp GTCTGCCTCAGTTTCCAGGATAACGGTGCAATGGCCTCAGCCAGGCCAGGTGCTTTGAGGGGCGAGTCGTaGCCCAGGGCCCGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VCLSFQDNGAMASARPGALRGES*PRARRV
Trigger: CACCCTCCGGGCCCTGGGCCACGACTCGCCCCTCAA...AGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp CGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCTTGAGGGGCGAGTCGTaGCCCAGGGCCCGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RSIPAGSRAIDSGANLCPLRGES*PRARRV
Trigger: CACCCTCCGGGCCCTGGGCCACGACTCGCCCCTCAA...GGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp AGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGGCACCTGCCAGGAACTaGTTGAGGGGCGAGTCGTGG +
Preference number: 4 (lower is better)
Translates to: SALMKVSPMSGEPRPLYRAPARN*LRGESW
Trigger: CCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGC...CCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CCA 90 bp CAGCCGCGACTTGACCACGTCCACAGGATAGGTAGAGAGCCAGGACACGATGCCCAGCAGATGACGCACTaGATGGCGCCCGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: QPRLDHVHRIGREPGHDAQQMTH*MAPAAA
Trigger: TGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGCTG...GGCATCGTGTCCTGGCTCTCTACCTATCCTGTGGACGTGGTCAAGTCGCGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CCA 90 bp GCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCAGTAGACGCCGAAGCTaGGCGTCTCACGCAGCAACG +
Preference number: 4 (lower is better)
Translates to: ALMKVSPMSGEPRPLYRPSRRRS*ASHAAT
Trigger: CGTTGCTGCGTGAGACGCCCAGCTTCGGCGTCTACT...GGGCCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CCA 90 bp AAGCCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCCGCCAACAGCAGCTTaGGCACCAGCAGGCGGTCGC +
Preference number: 4 (lower is better)
Translates to: KPSVVFTEHIPQDAWCSPPPTAA*APAGGR
Trigger: GCGACCGCCTGCTGGTGCCCAAGCTGCTGTTGGCGG...AGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp AGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCACCGCCAACAGCAGCTTaGGCACCAGCAGGCGGTCGC +
Preference number: 4 (lower is better)
Translates to: SPRLIDSTARSIPAGSRAPPTAA*APAGGR
Trigger: GCGACCGCCTGCTGGTGCCCAAGCTGCTGTTGGCGG...TGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp GCCTCAGTTTCCAGGATAACGGTGCAATGGCCTCAGCCAGGCCAGGTGCTGGCTGTGAGCGTCACAGGCTaGAGGGCTGCGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASVSRITVQWPQPGQVLAVSVTG*RAAPGQ
Trigger: CTGCCCTGGCGCAGCCCTCCAGCCTGTGACGCTCAC...AGCCAGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp AGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCAGTGAGCGTCACAGGCTaGAGGGCTGCGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SPRLIDSTARSIPAGSRAVSVTG*RAAPGQ
Trigger: CTGCCCTGGCGCAGCCCTCCAGCCTGTGACGCTCAC...TGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp AGCCCTGGCACTGAGAATGCCTGGGAGGCACCGTTTGCTGGGGAGCAGAGGGACGGAGTTAGAGGTCCCTaGGTGGCCCCTTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SPGTENAWEAPFAGEQRDGVRGP*VAPWLA
Trigger: GGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCC...GTCCCTCTGCTCCCCAGCAAACGGTGCCTCCCAGGCATTCTCAGTGCCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp AGCCCTGGCACTGAGAATGCCTGGGAGGCACCGTTTGCTGGGGAGCAGAGGGACGCTGGCGGTGGTAGGTaGGCCGGAGACTCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: SPGTENAWEAPFAGEQRDAGGGR*AGDSVV
Trigger: GACAACTGAGTCTCCGGCCCACCTACCACCGCCAGC...GTCCCTCTGCTCCCCAGCAAACGGTGCCTCCCAGGCATTCTCAGTGCCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp ATGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCGGAGGCACCGTTTGCTaGGGAGCAGAGGGACTGACC +
Preference number: 4 (lower is better)
Translates to: MVPPADSMASRRVQGPQFGGTVC*GAEGLT
Trigger: GGTCAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCC...GAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACCCTCGGCACTGAGAATGCCTaGGAGGCACCGTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PPADSMASRRVQGPQFTLGTENA*EAPFAG
Trigger: CCCAGCAAACGGTGCCTCCCAGGCATTCTCAGTGCC...GAGGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp GCAGTGCAACGTCCCGCGGTACTGAGGCTTCTCCACGCTCTGGACCTGAAGCCGTCCCATGCCCAGGGATaGCCGGTCACCCCCTCATCA +
Preference number: 4 (lower is better)
Translates to: AVQRPAVLRLLHALDLKPSHAQG*PVTPSS
Trigger: TGATGAGGGGGTGACCGGCCATCCCTGGGCATGGGA...CGGCTTCAGGTCCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTTGCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556868.1
CDS-3UTR CCA 90 bp GGTACCCCTAGCAGTGGCATGTGGAGAAGCTGGGGTATGCAGAGGATCCAGTTCAGCAGCTCTGGGGCCTaGGGCGCTGGTCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GTPSSGMWRSWGMQRIQFSSSGA*GAGQAP
Trigger: CGGGGCCTGACCAGCGCCCCAGGCCCCAGAGCTGCT...GAACTGGATCCTCTGCATACCCCAGCTTCTCCACATGCCACTGCTAGGGGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR TCA 90 bp CCGGGTGGAGGATGTGTGGAGTTAGAGGTCCCTGGGTGGCCCCTTGGTTGGCCATCCACGCTCTGGACCTaGAGCCGTACCTTGACCGTG +
Preference number: 4 (lower is better)
Translates to: PGGGCVELEVPGWPLGWPSTLWT*SRTLTV
Trigger: CACGGTCAAGGTACGGCTTCAGGTCCAGAGCGTGGA...TGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACATCCTCCACCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359232.8
CDS-3UTR TCA 90 bp AGGGTGTTGCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCCATGAACGTCCCGCGGTACTaGGGCTTCTCCACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RVLPCTPNTSALMKVSPMNVPRY*GFSTLW
Trigger: CCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTT...CATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAACACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR TCA 90 bp AGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCACTGCCAGGAACTGGTTaGGGGGCGAGTCGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SPRLIDSTARSIPAGSRALPGTG*GASRGP
Trigger: TGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAG...TGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp GGAGGATGTGTGGAGTTAGAGGTCCCTGGGTGGCCCCTTGGTTGGCCATCAGAGCCAGGACACGATGCCTaGCGTACCGCCCGCCAACAG +
Preference number: 4 (lower is better)
Translates to: GGCVELEVPGWPLGWPSEPGHDA*RTARQQ
Trigger: CTGTTGGCGGGCGGTACGTCAGGCATCGTGTCCTGG...CTCTGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACATCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp GTGGGCCGGAGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACAGGAAGGAGGGCGGGGTaGGCGTCACAGGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: VGRRLSCPSAGHVPILWTGRRAG*ASQAGG
Trigger: CCCTCCAGCCTGTGACGCTCACCCCGCCCTCCTTCC...TGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCTCCGGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp TTTGGGGGATCCTGGCTGGCGGTGGTAGGTGGGCCGGAGACTCAGTTGTCCGTCCCTAGTCCCGCAGGCTaGTATGGTGCCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: FGGSWLAVVGGPETQLSVPSPAG*YGASSR
Trigger: TCTGCTGGAGGCACCATATCAGCCTGCGGGACTAGG...GACGGACAACTGAGTCTCCGGCCCACCTACCACCGCCAGCCAGGATCCCCCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp GCCAGCCTGCAGGGCAGGAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTCCTAGTCCCGCAGGCTaGTATGGTGCCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ASLQGRSTMTWPGSQKGAPSPAG*YGASSR
Trigger: TCTGCTGGAGGCACCATATCAGCCTGCGGGACTAGG...AGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCTGCAGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp GCCAGCCTGCAGGGCAGGAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTGTACCCCTCAGTCTGTaGCGAGCCCTTGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: ASLQGRSTMTWPGSQKGAVPLSL*RALALW
Trigger: CCAGAGAGCAAGGGCTCGTCACAGACTGAGGGGTAC...AGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCTGCAGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp CCCAGCACGCTCTCTTGCTTGATGATGGACTTGAAGCAGTGCAACGTCCCGCGGGGGCCCGGAGGGTGTTaGCCTGCACCCCGAACACCA +
Preference number: 4 (lower is better)
Translates to: PSTLSCLMMDLKQCNVPRGPGGC*PAPRTP
Trigger: TGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCC...CCGCGGGACGTTGCACTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR GCA 90 bp GCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGGTGCCCGCCGCCGCACCTaGCAGGAACTGGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: ASQQEAGQSTQGPIYVPGARRRT*QELVEG
Trigger: CCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGC...ACCTGGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp GTGGGCCGGAGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACAGCGAGCCCTTGTAGGTaGGCGCTGGGCCCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: VGRRLSCPSAGHVPILWTASPCR*ALGPRP
Trigger: AGGACGCGGGCCCAGCGCGCACCTACAAGGGCTCGC...TGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCTCCGGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp CCCAGCACGCTCTCTTGCTTGATGATGGACTTGAAGCAGTGCAACGTCCCGCGGCGCAGTCCGTCCGCCTaGAGCCGCGACTTGACCACG +
Preference number: 4 (lower is better)
Translates to: PSTLSCLMMDLKQCNVPRRSPSA*SRDLTT
Trigger: CGTGGTCAAGTCGCGGCTGCAGGCGGACGGACTGCG...CCGCGGGACGTTGCACTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR GCA 90 bp TGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACTCAGCCAGGCCAGGTaGTGGCTGCTGCTGGGAATA +
Preference number: 4 (lower is better)
Translates to: WCLQQTPWLPGGCRVPSSLSQAR*WLLLGI
Trigger: TATTCCCAGCAGCAGCCAGCACCTGGCCTGGCTGAG...TGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp AGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCATGGCTTCCCGGAGGGTaGAGGGTCCCCAGTTCACCC +
Preference number: 4 (lower is better)
Translates to: SPRLIDSTARSIPAGSRAWLPGG*RVPSSP
Trigger: GGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCA...TGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp GGTACCCCTAGCAGTGGCATGTGGAGAAGCTGGGGTATGCAGAGGATCCAGTTCAGAAGTCCAGCGCCATaGCCGGGTCCCCGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: GTPSSGMWRSWGMQRIQFRSPAP*PGPRRG
Trigger: GCCTCGCCGGGGACCCGGCCATGGCGCTGGACTTCT...GAACTGGATCCTCTGCATACCCCAGCTTCTCCACATGCCACTGCTAGGGGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359232.8
ENST00000392908.7
CDS-3UTR CCA 90 bp CCCAGCACGCTCTCTTGCTTGATGATGGACTTGAAGCAGTGCAACGTCCCGCGGCAGCAGATGACGCACTaGATGGCGCCCGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: PSTLSCLMMDLKQCNVPRQQMTH*MAPAAA
Trigger: TGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGCTG...CCGCGGGACGTTGCACTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CCA 90 bp CCGGGTGGAGGATGTGTGGAGTTAGAGGTCCCTGGGTGGCCCCTTGGTTGGCCAAGTAGACGCCGAAGCTaGGCGTCTCACGCAGCAACG +
Preference number: 4 (lower is better)
Translates to: PGGGCVELEVPGWPLGWPSRRRS*ASHAAT
Trigger: CGTTGCTGCGTGAGACGCCCAGCTTCGGCGTCTACT...TGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACATCCTCCACCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp GCCAGCCTGCAGGGCAGGAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTAGTAGACGCCGAAGCTaGGCGTCTCACGCAGCAACG +
Preference number: 4 (lower is better)
Translates to: ASLQGRSTMTWPGSQKGASRRRS*ASHAAT
Trigger: CGTTGCTGCGTGAGACGCCCAGCTTCGGCGTCTACT...AGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCTGCAGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp AGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCACCCTGGGTGGCCCCTTaGTTGGCCATCAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: SPRLIDSTARSIPAGSRAPWVAP*LAIRDP
Trigger: GGGGTCTCTGATGGCCAACCAAGGGGCCACCCAGGG...TGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp CCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACCCTCTTAGAGGTCCCTGGGTaGCCCCTTGGTTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: PPADSMASRRVQGPQFTLLEVPG*PLGWPS
Trigger: TGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAA...GAGGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCCTAGGAGTGGCAGCAGCTaGGGTACCCCTAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PSVVFTEHIPQDAWCSPPRSGSS*GTPSSG
Trigger: GCCACTGCTAGGGGTACCCCAGCTGCTGCCACTCCT...AGGAGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGCACTGAGAATGCCTGGGAGGCTCCAGCAGACTCCATaGCTTCCCGGAGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: QALCLHRDEALALRMPGRLQQTP*LPGGCR
Trigger: CCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAG...CCTCCCAGGCATTCTCAGTGCCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp AAGCCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCCAGACCTCCACCGCTaGCCTGTTTGCTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: KPSVVFTEHIPQDAWCSPPDLHR*PVCSPP
Trigger: GGGTGGGGAGCAAACAGGCCAGCGGTGGAGGTCTGG...AGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp ACCGTGACGGTGGCGAAGGTGGCAGCGTTGACGGGGAAGGCGCGCAGCAGCGTGAGAGGGACTGACCTTTaGCTTCTTTGTGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TVTVAKVAALTGKARSSVRGTDL*LLCGWR
Trigger: CCTCCAGCCACAAAGAAGCCAAAGGTCAGTCCCTCT...CACGCTGCTGCGCGCCTTCCCCGTCAACGCTGCCACCTTCGCCACCGTCACGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392908.7
CDS-3UTR TCA 90 bp GGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACATCCTCGTCCTCCCCCTaGGGCCCCTCGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GSSSVTPGGTPSFPLSLTSSSSP*GPSPGW
Trigger: CCAGCCCGGCGAGGGGCCTCAGGGGGAGGACGAGGA...TGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359232.8
ENST00000392908.7
CDS-3UTR TCA 90 bp AGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCAAACGTCCCGCGGTACTaGGGCTTCTCCACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPRLIDSTARSIPAGSRANVPRY*GFSTLW
Trigger: CCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTT...TGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp GCAACGTCCCGCGGTACTGAGGCTTCTCCACGCTCTGGACCTGAAGCCGTACTAAACGTCCCGCGGTACTaGGGCTTCTCCACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ATSRGTEASPRSGPEAVLNVPRY*GFSTLW
Trigger: CCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTT...TAGTACGGCTTCAGGTCCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR TCA 90 bp AGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCACCTGCAGCCGCGACTTaGCCACGTCCACAGGATAGG +
Preference number: 4 (lower is better)
Translates to: SPRLIDSTARSIPAGSRAPAAAT*PRPQDR
Trigger: CCTATCCTGTGGACGTGGTCAAGTCGCGGCTGCAGG...TGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp CCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAACGCCAGCCCCCGTGTaGAGACGCGCCAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: PEAEGFLLATAASHLNCPTPAPV*RRASPR
Trigger: CCGAGGGCTGGCGCGTCTTCACACGGGGGCTGGCGT...TGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp AGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACAGGCAGCCTGGGAAGGAGGGCGGGGTaGGCGTCACAGGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RLSCPSAGHVPILWTGSLGRRAG*ASQAGG
Trigger: CCCTCCAGCCTGTGACGCTCACCCCGCCCTCCTTCC...CAGGCTGCCTGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp CCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCCTAGGGCAGGAGCACAATaGCGTGGCCAGGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: PSVVFTEHIPQDAWCSPPRAGAQ*RGQDPR
Trigger: TCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCT...AGGAGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp GCCACCCCTGTGCCCACTAGCAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGGAGGATCCAGTTCTGTaGCACCAGGAGGCACACCAA +
Preference number: 4 (lower is better)
Translates to: ATPVPTSRPCAFTGMKPWEDPVL*HQEAHQ
Trigger: TTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTC...CCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTGCTAGTGGGCACAGGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp CCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCCTATGAAGCCCTGGCACTaGGAATGCCTGGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: PSVVFTEHIPQDAWCSPPMKPWH*ECLGGT
Trigger: GGTGCCTCCCAGGCATTCTCAGTGCCAGGGCTTCAT...AGGAGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp CCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCCTTGTGACAGTACGGACTaGCACAGACTCGGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PSVVFTEHIPQDAWCSPPCDSTD*HRLGWP
Trigger: GGGCCACCCGAGTCTGTGTCAGTCCGTACTGTCACA...AGGAGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR TCA 90 bp TTCTCTGCTGAGCCCTCTGCACACTTTGGGGGATCCTGGCTGGCGGTGGTAGGTTTGGGGAGATGGGCATaGCAGGGTGGGGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FSAEPSAHFGGSWLAVVGLGRWA*QGGVQA
Trigger: AGCCTGGACCCCACCCTGTCATGCCCATCTCCCCAA...ACCTACCACCGCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGCTCAGCAGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR TCA 90 bp AAGCCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCCCCAGGACCTGTGCTaGGCCCAAGCTTGCCTCACA +
Preference number: 4 (lower is better)
Translates to: KPSVVFTEHIPQDAWCSPPQDLC*AQACLT
Trigger: TGTGAGGCAAGCTTGGGCTCAGCACAGGTCCTGGGG...AGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR TCA 90 bp TTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCAGCATGGAGACAGCCCCTTaGCCGTGTCAAACGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LMKVSPMSGEPRPLYRPSMETAP*PCQTGV
Trigger: GACACCCGTTTGACACGGTCAAGGGGCTGTCTCCAT...GCTGGGCCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR GCA 90 bp AGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACAGGCAGCCTGGCTGGGCCCGCGTCCTaGAGCTGCAGCCGCGTCTTG +
Preference number: 4 (lower is better)
Translates to: RLSCPSAGHVPILWTGSLAGPAS*SCSRVL
Trigger: CAAGACGCGGCTGCAGCTGCAGGACGCGGGCCCAGC...CAGGCTGCCTGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp CAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTGCACGCAGTCCAGGATaGCGCGGTAGCGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: QRIQFCDTRRHTKFSSVPARSPG*RGSAGR
Trigger: GCGCCCCGCGCTACCGCGGCATCCTGGACTGCGTGC...AGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp GTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGCCCCAGGACGCCTGGTaGAGCCCTCCTCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VTPGGTPSFPLSLTQTRGPQDAW*SPPLPQ
Trigger: CTGGGGCAGAGGAGGGCTGCACCAGGCGTCCTGGGG...CCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp ATGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCGATGCAGTGAGGTCATaGCACTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: MVPPADSMASRRVQGPQFDAVRS*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCATGACCTCACTGCATC...GAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp AGGCCCTTGTACAGGCCCAGCACGCTCTCTTGCTTGATGATGGACTTGAAGCAGTTGAGGGGCGAGTCGTaGCCCAGGGCCCGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RPLYRPSTLSCLMMDLKQLRGES*PRARRV
Trigger: CACCCTCCGGGCCCTGGGCCACGACTCGCCCCTCAA...CTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGGCCTGTACAAGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CCA 90 bp GTGGGCCGGAGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACACAGCAGATGACGCACTaGATGGCGCCCGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: VGRRLSCPSAGHVPILWTQQMTH*MAPAAA
Trigger: TGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGCTG...TGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCTCCGGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCACAGCAGATGACGCACTaGATGGCGCCCGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: LIDSTARSIPAGSRAIDSQQMTH*MAPAAA
Trigger: TGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGCTG...TGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp GCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGGTGTGAGCGTCACAGGCTaGAGGGCTGCGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASQQEAGQSTQGPIYVPGVSVTG*RAAPGQ
Trigger: CTGCCCTGGCGCAGCCCTCCAGCCTGTGACGCTCAC...ACCTGGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp GTCTGCCTCAGTTTCCAGGATAACGGTGCAATGGCCTCAGCCAGGCCAGGTGCTCCCTGGGTGGCCCCTTaGTTGGCCATCAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: VCLSFQDNGAMASARPGAPWVAP*LAIRDP
Trigger: GGGGTCTCTGATGGCCAACCAAGGGGCCACCCAGGG...AGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp GGGAGGCACCGTTTGCTGGGGAGCAGAGGGACTGACCTTTGGCTTCTTTGTGGCCTCCAGCAGACTCCATaGCTTCCCGGAGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GRHRLLGSRGTDLWLLCGLQQTP*LPGGCR
Trigger: CCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAG...GCCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp TTCTCTGCTGAGCCCTCTGCACACTTTGGGGGATCCTGGCTGGCGGTGGTAGGTGCCCTCTGCACACTTTaGGGGATCCTGGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: FSAEPSAHFGGSWLAVVGALCTL*GILAGG
Trigger: ACCGCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGC...ACCTACCACCGCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGCTCAGCAGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CAGCCGCGACTTGACCACGTCCACAGGATAGGTAGAGAGCCAGGACACGATGCCGCCCTCTGCACACTTTaGGGGATCCTGGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: QPRLDHVHRIGREPGHDAALCTL*GILAGG
Trigger: ACCGCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGC...GGCATCGTGTCCTGGCTCTCTACCTATCCTGTGGACGTGGTCAAGTCGCGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392908.7
CDS-3UTR CCA 90 bp AAGCCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTGCCCTCTGCACACTTTaGGGGATCCTGGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: KPSVVFTEHIPQDAWCSPALCTL*GILAGG
Trigger: ACCGCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGC...AGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CAGCCGCGACTTGACCACGTCCACAGGATAGGTAGAGAGCCAGGACACGATGCCGGAGGCACCGTTTGCTaGGGAGCAGAGGGACTGACC +
Preference number: 4 (lower is better)
Translates to: QPRLDHVHRIGREPGHDAGGTVC*GAEGLT
Trigger: GGTCAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCC...GGCATCGTGTCCTGGCTCTCTACCTATCCTGTGGACGTGGTCAAGTCGCGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392908.7
CDS-3UTR CCA 90 bp ATGGCGCCCGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGTGGCCCAGGAGATCCAGATCTTaGATTCTTTCAGTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: MAPAAAPARNWLRGESWPRRSRS*ILSVPR
Trigger: CCTTGGGACTGAAAGAATCCAAGATCTGGATCTCCT...GGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556868.1
CDS-3UTR CCA 90 bp TTGCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCTGTGCTTCAGGACGGTaGCTGTGGTTCTGGGCGCTA +
Preference number: 4 (lower is better)
Translates to: LPCTPNTSALMKVSPMSGCASGR*LWFWAL
Trigger: TAGCGCCCAGAACCACAGCCACCGTCCTGAAGCACA...GCCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556868.1
CDS-3UTR CCA 90 bp AGCCCTGGCACTGAGAATGCCTGGGAGGCACCGTTTGCTGGGGAGCAGAGGGACCTACGGAGGGAACTCTaGGGTTGGGGAGATGGGCAT +
Preference number: 4 (lower is better)
Translates to: SPGTENAWEAPFAGEQRDLRREL*GWGDGH
Trigger: ATGCCCATCTCCCCAACCCCAGAGTTCCCTCCGTAG...GTCCCTCTGCTCCCCAGCAAACGGTGCCTCCCAGGCATTCTCAGTGCCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp TTTGGGGGATCCTGGCTGGCGGTGGTAGGTGGGCCGGAGACTCAGTTGTCCGTCACAGTGCACTGCCAGTaGGGCATGAACGACCTCCTG +
Preference number: 4 (lower is better)
Translates to: FGGSWLAVVGGPETQLSVTVHCQ*GMNDLL
Trigger: CAGGAGGTCGTTCATGCCCCACTGGCAGTGCACTGT...GACGGACAACTGAGTCTCCGGCCCACCTACCACCGCCAGCCAGGATCCCCCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR TCA 90 bp CGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAACGTCCCGCGGTACTaGGGCTTCTCCACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RSIPAGSRAIDSGANLCPNVPRY*GFSTLW
Trigger: CCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTT...GGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp GGTACCCCTAGCAGTGGCATGTGGAGAAGCTGGGGTATGCAGAGGATCCAGTTCCTGCCAGGAACTGGTTaGGGGGCGAGTCGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GTPSSGMWRSWGMQRIQFLPGTG*GASRGP
Trigger: TGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAG...GAACTGGATCCTCTGCATACCCCAGCTTCTCCACATGCCACTGCTAGGGGTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp GTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGCGAAGGTGGCAGCGTTaGCGGGGAAGGCGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: VTPGGTPSFPLSLTQTRGRRWQR*RGRRAA
Trigger: TGCTGCGCGCCTTCCCCGTCAACGCTGCCACCTTCG...CCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp GCCAGCCTGCAGGGCAGGAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTTATGTCCCAGGTTTCTaGGAAGGAGCCCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ASLQGRSTMTWPGSQKGAYVPGF*EGALGK
Trigger: CTTCCCCAGGGCTCCTTCTCAGAAACCTGGGACATA...AGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCTGCAGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp CCGGGTGGAGGATGTGTGGAGTTAGAGGTCCCTGGGTGGCCCCTTGGTTGGCCATATGTCCCAGGTTTCTaGGAAGGAGCCCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PGGGCVELEVPGWPLGWPYVPGF*EGALGK
Trigger: CTTCCCCAGGGCTCCTTCTCAGAAACCTGGGACATA...TGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACATCCTCCACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp CCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTCCACGCTCTGGACCTaGAGCCGTACTAGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: PQLAASQQEAGQSTQGPISTLWT*SRTSAL
Trigger: GAGAGCGCTAGTACGGCTTCAGGTCCAGAGCGTGGA...AATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556505.5
CDS-3UTR TCA 90 bp CCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTCCACGCTCTGGACCTaGAGCCGTACCTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PQLAASQQEAGQSTQGPISTLWT*SRTWKE
Trigger: CTCCTTCCAGGTACGGCTTCAGGTCCAGAGCGTGGA...AATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp TTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACCGGAGGGTGTTGCCCTaGACCCCGAACACCAGCGCG +
Preference number: 4 (lower is better)
Translates to: FCTATPGCAKPSVVFTEHRRVLP*TPNTSA
Trigger: CGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCG...GTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp CAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTCCCGCGTCCTGCAGCTaGAGCCGCGTCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QRIQFCDTRRHTKFSSVPPASCS*SRVLAS
Trigger: GCTGGCCAAGACGCGGCTGCAGCTGCAGGACGCGGG...AGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp CCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGCGAGCCCTTGTAGGTaGGCGCTGGGCCCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: PEAEGFLLATAASHLNCPASPCR*ALGPRP
Trigger: AGGACGCGGGCCCAGCGCGCACCTACAAGGGCTCGC...TGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp CACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGGTGGCCCACCACCCAGAGCCAGGACACGATaGCTGACGTACCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: HTKFSSVPNTDQRGGPPPRARTR*LTYRPP
Trigger: TGGCGGGCGGTACGTCAGGCATCGTGTCCTGGCTCT...GGGTGGTGGGCCACCCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp GGAGGATGTGTGGAGTTAGAGGTCCCTGGGTGGCCCCTTGGTTGGCCATCAGAGCTCAGCCAGGCCAGGTaGTGGCTGCTGCTGGGAATA +
Preference number: 4 (lower is better)
Translates to: GGCVELEVPGWPLGWPSELSQAR*WLLLGI
Trigger: TATTCCCAGCAGCAGCCAGCACCTGGCCTGGCTGAG...CTCTGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACATCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp CAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGCACTGAGAATGCCTGGGAGGCGCAGGCTGATATGGTaGCTCCAGCAGACTCCATGG +
Preference number: 4 (lower is better)
Translates to: QALCLHRDEALALRMPGRRRLIW*LQQTPW
Trigger: CCATGGAGTCTGCTGGAGGCACCATATCAGCCTGCG...CCTCCCAGGCATTCTCAGTGCCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp CGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCCTGGGAGGCACCGTTTaGTGGGGAGCAGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: RSIPAGSRAIDSGANLCPLGGTV*WGAEGL
Trigger: CAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCCCAG...GGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp CACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGGTGGCCCACCACCCCTGGGAGGCACCGTTTaGTGGGGAGCAGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: HTKFSSVPNTDQRGGPPPLGGTV*WGAEGL
Trigger: CAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCCCAG...GGGTGGTGGGCCACCCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp GCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAGGTGCAGCCCTCCTCTaGCCCAGGCCCCAACTAGCC +
Preference number: 4 (lower is better)
Translates to: AKFSPRLIDSTARSIPAGGAALL*PRPQLA
Trigger: GGCTAGTTGGGGCCTGGGGCAGAGGAGGGCTGCACC...TCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp CGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCACACTCCCCATCCCATaGCCAGGGATGGCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: RSIPAGSRAIDSGANLCPTLPIP*PGMAGH
Trigger: GTGACCGGCCATCCCTGGGCATGGGATGGGGAGTGT...GGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp CCCAGCACGCTCTCTTGCTTGATGATGGACTTGAAGCAGTGCAACGTCCCGCGGACACTCCCCATCCCATaGCCAGGGATGGCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: PSTLSCLMMDLKQCNVPRTLPIP*PGMAGH
Trigger: GTGACCGGCCATCCCTGGGCATGGGATGGGGAGTGT...CCGCGGGACGTTGCACTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556868.1
CDS-3UTR GCA 90 bp TCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGACTGGTCAGGCCCCGCTaGCTCCGAGCCCAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SVTPGGTPSFPLSLTQTRLVRPR*LRAQWP
Trigger: GGGCCACTGGGCTCGGAGGCAGCGGGGCCTGACCAG...TCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp AGGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGCAGCAGATGACGCACTaGATGGCGCCCGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: RPRGGRISPCHSCITLELQQMTH*MAPAAA
Trigger: TGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGCTG...CAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp TTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACCTTGTAGGTGCGCGCTaGGCCCGCGTCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FCTATPGCAKPSVVFTEHLVGAR*ARVLQL
Trigger: CAGCTGCAGGACGCGGGCCCAGCGCGCACCTACAAG...GTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp TTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACCCGCCAACAGCAGCTTaGGCACCAGCAGGCGGTCGC +
Preference number: 4 (lower is better)
Translates to: FCTATPGCAKPSVVFTEHPPTAA*APAGGR
Trigger: GCGACCGCCTGCTGGTGCCCAAGCTGCTGTTGGCGG...GTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGCACTGAGAATGCCTGGGAGGTTAGAGGTCCCTGGGTaGCCCCTTGGTTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: QALCLHRDEALALRMPGRLEVPG*PLGWPS
Trigger: TGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAA...CCTCCCAGGCATTCTCAGTGCCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGGTGGCCCACCACCCGGAGTTAGAGGTCCCTaGGTGGCCCCTTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: HTKFSSVPNTDQRGGPPPGVRGP*VAPWLA
Trigger: GGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCC...GGGTGGTGGGCCACCCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp GCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACATTCCCCAGCTCCAGCAGACTCCATaGCTTCCCGGAGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: ATPGCAKPSVVFTEHIPQLQQTP*LPGGCR
Trigger: CCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAG...CTGGGGAATGTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp GCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGGTATTCCCCAGGACGCCTaGTGCAGCCCTCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: ASQQEAGQSTQGPIYVPGIPQDA*CSPPLP
Trigger: GGGCAGAGGAGGGCTGCACCAGGCGTCCTGGGGAAT...ACCTGGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCGGGTGGGGTCCAGGCTaGGATCTGGTTCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: RSIPAGSRAIDSGANLCPGWGPG*DLVHLV
Trigger: GACCAGGTGAACCAGATCCCAGCCTGGACCCCACCC...GGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp TTCTCTGCTGAGCCCTCTGCACACTTTGGGGGATCCTGGCTGGCGGTGGTAGGTCCAGGAGCTCCTGCCTaGTCTCTGCCAGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: FSAEPSAHFGGSWLAVVGPGAPA*SLPVAS
Trigger: AGAGGCTACTGGCAGAGACCAGGCAGGAGCTCCTGG...ACCTACCACCGCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGCTCAGCAGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554912.1
3UTR CAA 72 bp TCCTGGCTGGCGGTGGTAGGTGGGCCGGAGACTCAGTaGTCCGTCAGCTGGCCATGTCCCCATTTTATGGAC +
Preference number: 4 (lower is better)
Translates to: SWLAVVGGPETQ*SVSWPCPHFMD
Trigger: GTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCTCCGGCCCACCTACCACCGCCAGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp AGGCCCTTGTACAGGCCCAGCACGCTCTCTTGCTTGATGATGGACTTGAAGCAGCTGCCAGGAACTGGTTaGGGGGCGAGTCGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RPLYRPSTLSCLMMDLKQLPGTG*GASRGP
Trigger: TGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAG...CTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGGCCTGTACAAGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR TCA 90 bp AGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACAGGCAGCCTGCCAGGACACGATGCCTaGCGTACCGCCCGCCAACAG +
Preference number: 4 (lower is better)
Translates to: RLSCPSAGHVPILWTGSLPGHDA*RTARQQ
Trigger: CTGTTGGCGGGCGGTACGTCAGGCATCGTGTCCTGG...CAGGCTGCCTGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp GGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGGACACGATGCCTaGCGTACCGCCCGCCAACAG +
Preference number: 4 (lower is better)
Translates to: GPEAEGFLLATAASHLNCPGHDA*RTARQQ
Trigger: CTGTTGGCGGGCGGTACGTCAGGCATCGTGTCCTGG...ACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp TTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGACGCCAGCCCCCGTGTaGAGACGCGCCAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: FIPLTVSVQRHQAVQSPVTPAPV*RRASPR
Trigger: CCGAGGGCTGGCGCGTCTTCACACGGGGGCTGGCGT...CACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp ATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCGGAAGGAGGGCGGGGTaGGCGTCACAGGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: MQRIQFCDTRRHTKFSSVGRRAG*ASQAGG
Trigger: CCCTCCAGCCTGTGACGCTCACCCCGCCCTCCTTCC...GACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp AGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCACAGTGTCGTCTTCACTaGGCACATTCCCCAGGACGC +
Preference number: 4 (lower is better)
Translates to: SPRLIDSTARSIPAGSRAQCRLH*AHSPGR
Trigger: GCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTG...TGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp GCAGTGCAACGTCCCGCGGTACTGAGGCTTCTCCACGCTCTGGACCTGAAGCCGTCGTGTAGAAACGTGTaGAGGCCGTGTGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: AVQRPAVLRLLHALDLKPSCRNV*RPCASG
Trigger: TCCTGAAGCACACGGCCTTCACACGTTTCTACACGA...CGGCTTCAGGTCCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTTGCACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556868.1
CDS-3UTR TCA 90 bp CAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGCACTGAGAATGCCTGGGAGGTGCCAGGCTCTCCTTTaGGGATTGATGGGAACGGAC +
Preference number: 4 (lower is better)
Translates to: QALCLHRDEALALRMPGRCQALL*GLMGTD
Trigger: GTCCGTTCCCATCAATCCTCAAAGGAGAGCCTGGCA...CCTCCCAGGCATTCTCAGTGCCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp GAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGACGGGCCCGGAGGGTGTTaGCCTGCACCCCGAACACCA +
Preference number: 4 (lower is better)
Translates to: EAEGFLLATAASHLNCPDGPGGC*PAPRTP
Trigger: TGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCC...GTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp CCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGGGCCCGGAGGGTGTTaGCCTGCACCCCGAACACCA +
Preference number: 4 (lower is better)
Translates to: PEAEGFLLATAASHLNCPGPGGC*PAPRTP
Trigger: TGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCC...TGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp TCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGCCCGCCGCCGCACCTaGCAGGAACTGGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SVTPGGTPSFPLSLTQTRARRRT*QELVEG
Trigger: CCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGC...TCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp TCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGCTGGGCCCGCGTCCTaGAGCTGCAGCCGCGTCTTG +
Preference number: 4 (lower is better)
Translates to: SVTPGGTPSFPLSLTQTRAGPAS*SCSRVL
Trigger: CAAGACGCGGCTGCAGCTGCAGGACGCGGGCCCAGC...TCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp GTATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGGCGAGCCCTTGTAGGTaGGCGCTGGGCCCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: VCRGSSSVTPGGTPSFPLASPCR*ALGPRP
Trigger: AGGACGCGGGCCCAGCGCGCACCTACAAGGGCTCGC...CAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp CCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCACGCAGTCCGTCCGCCTaGAGCCGCGACTTGACCACG +
Preference number: 4 (lower is better)
Translates to: PEAEGFLLATAASHLNCPRSPSA*SRDLTT
Trigger: CGTGGTCAAGTCGCGGCTGCAGGCGGACGGACTGCG...TGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp CTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCCGCAGTCCGTCCGCCTaGAGCCGCGACTTGACCACG +
Preference number: 4 (lower is better)
Translates to: LISKIQPTSDRLHSSQHPRSPSA*SRDLTT
Trigger: CGTGGTCAAGTCGCGGCTGCAGGCGGACGGACTGCG...GGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp CACTTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGCACGCAGTCCAGGATaGCGCGGTAGCGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: HFIPLTVSVQRHQAVQSPARSPG*RGSAGR
Trigger: GCGCCCCGCGCTACCGCGGCATCCTGGACTGCGTGC...TGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp GTCTGCCTCAGTTTCCAGGATAACGGTGCAATGGCCTCAGCCAGGCCAGGTGCTCTCAGCCAGGCCAGGTaGTGGCTGCTGCTGGGAATA +
Preference number: 4 (lower is better)
Translates to: VCLSFQDNGAMASARPGALSQAR*WLLLGI
Trigger: TATTCCCAGCAGCAGCCAGCACCTGGCCTGGCTGAG...AGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp TTCTCTGCTGAGCCCTCTGCACACTTTGGGGGATCCTGGCTGGCGGTGGTAGGTCGCAGGCTGATATGGTaGCTCCAGCAGACTCCATGG +
Preference number: 4 (lower is better)
Translates to: FSAEPSAHFGGSWLAVVGRRLIW*LQQTPW
Trigger: CCATGGAGTCTGCTGGAGGCACCATATCAGCCTGCG...ACCTACCACCGCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGCTCAGCAGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp CAACTAGCCACCCCTGTGCCCACTAGCAGGCCCTGTGCCTTCACAGGGATGAAGCGCAGGCTGATATGGTaGCTCCAGCAGACTCCATGG +
Preference number: 4 (lower is better)
Translates to: QLATPVPTSRPCAFTGMKRRLIW*LQQTPW
Trigger: CCATGGAGTCTGCTGGAGGCACCATATCAGCCTGCG...CTTCATCCCTGTGAAGGCACAGGGCCTGCTAGTGGGCACAGGGGTGGCTAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp GTATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGCCCCAGGACGCCTGGTaGAGCCCTCCTCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VCRGSSSVTPGGTPSFPLPQDAW*SPPLPQ
Trigger: CTGGGGCAGAGGAGGGCTGCACCAGGCGTCCTGGGG...CAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp GAGGCAGTCCAGCGAGCCCTTGTAGGTGCGCGCTGGGCCCGCGTCCTGCAGCTGACAAAGTTACACTTTTaGTATGGATGGAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: EAVQRALVGARWARVLQLTKLHF*YGWRQP
Trigger: GGGCTGTCTCCATCCATAGCAAAAGTGTAACTTTGT...CAGCTGCAGGACGCGGGCCCAGCGCGCACCTACAAGGGCTCGCTGGACTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR GCA 90 bp CAACTAGCCACCCCTGTGCCCACTAGCAGGCCCTGTGCCTTCACAGGGATGAAGGTCTGGTGCTTAGGCTaGCTAGGAGGGTCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: QLATPVPTSRPCAFTGMKVWCLG*LGGSPK
Trigger: CTTGGGAGACCCTCCTAGGCAGCCTAAGCACCAGAC...CTTCATCCCTGTGAAGGCACAGGGCCTGCTAGTGGGCACAGGGGTGGCTAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp GGTACCCCTAGCAGTGGCATGTGGAGAAGCTGGGGTATGCAGAGGATCCAGTTCGCACCTGCCAGGAACTaGTTGAGGGGCGAGTCGTGG +
Preference number: 4 (lower is better)
Translates to: GTPSSGMWRSWGMQRIQFAPARN*LRGESW
Trigger: CCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGC...GAACTGGATCCTCTGCATACCCCAGCTTCTCCACATGCCACTGCTAGGGGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp GCCAGCCTGCAGGGCAGGAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTATCCCAGAAAGGGGCTaGAGTGTCTGCCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: ASLQGRSTMTWPGSQKGAIPERG*SVCLSF
Trigger: GAAACTGAGGCAGACACTCCAGCCCCTTTCTGGGAT...AGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCTGCAGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp AGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACAGGCAGCCTGCCCTGGGTGGCCCCTTaGTTGGCCATCAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: RLSCPSAGHVPILWTGSLPWVAP*LAIRDP
Trigger: GGGGTCTCTGATGGCCAACCAAGGGGCCACCCAGGG...CAGGCTGCCTGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGAGTTAGAGGTCCCTaGGTGGCCCCTTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: LIDSTARSIPAGSRAIDSGVRGP*VAPWLA
Trigger: GGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCC...TGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp CCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCCTGGCATGTGGAGAAGCTaGGGTATGCAGAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: PSVVFTEHIPQDAWCSPPGMWRS*GMQRIQ
Trigger: CTGGATCCTCTGCATACCCCAGCTTCTCCACATGCC...AGGAGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCCTCCTAGCAGTGGCATGTaGAGAAGCTGGGGTATGCAG +
Preference number: 4 (lower is better)
Translates to: PSVVFTEHIPQDAWCSPPPSSGM*RSWGMQ
Trigger: CTGCATACCCCAGCTTCTCCACATGCCACTGCTAGG...AGGAGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp GGTACCCCTAGCAGTGGCATGTGGAGAAGCTGGGGTATGCAGAGGATCCAGTTCAGGAGTGGCAGCAGCTaGGGTACCCCTAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GTPSSGMWRSWGMQRIQFRSGSS*GTPSSG
Trigger: GCCACTGCTAGGGGTACCCCAGCTGCTGCCACTCCT...GAACTGGATCCTCTGCATACCCCAGCTTCTCCACATGCCACTGCTAGGGGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp GGGAGGCACCGTTTGCTGGGGAGCAGAGGGACTGACCTTTGGCTTCTTTGTGGCTCCCGCAGGCTGATATaGTGCCTCCAGCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: GRHRLLGSRGTDLWLLCGSRRLI*CLQQTP
Trigger: TGGAGTCTGCTGGAGGCACCATATCAGCCTGCGGGA...GCCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp GGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGACCTCCACCGCTaGCCTGTTTGCTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: GPEAEGFLLATAASHLNCPDLHR*PVCSPP
Trigger: GGGTGGGGAGCAAACAGGCCAGCGGTGGAGGTCTGG...ACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
3UTR CAA 72 bp ACACTTGAACTGTCCAGACCTCCACCGCTGGCCTGTTaGCTCCCCACCCTAGTCCCGCAGGCTGATATGGTG +
Preference number: 4 (lower is better)
Translates to: TLELSRPPPLAC*LPTLVPQADMV
Trigger: CACCATATCAGCCTGCGGGACTAGGGTGGGGAGCAAACAGGCCAGCGGTGGAGGTCTGGACAGTTCAAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp TCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGACCATGGGGCAGCAGATaGCGCACTGGATGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: SVTPGGTPSFPLSLTQTRPWGSR*RTGWRP
Trigger: CGGGCGCCATCCAGTGCGTCATCTGCTGCCCCATGG...TCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp GGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACCATGGGGCAGCAGATaGCGCACTGGATGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: GSSSVTPGGTPSFPLSLTPWGSR*RTGWRP
Trigger: CGGGCGCCATCCAGTGCGTCATCTGCTGCCCCATGG...TGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp CCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAACACCATGCCCCGGTTaGCGCCACGCAGACCCTCGT +
Preference number: 4 (lower is better)
Translates to: PEAEGFLLATAASHLNCPTPCPG*RHADPR
Trigger: ACGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGT...TGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp AAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGACACCATGCCCCGGTTaGCGCCACGCAGACCCTCGT +
Preference number: 4 (lower is better)
Translates to: KIQPTSDRLHSSQHPSRKTPCPG*RHADPR
Trigger: ACGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGT...CTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp TTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGCGAAGGTGGCAGCGTTaGCGGGGAAGGCGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: FCDTRRHTKFSSVPNTDQRRWQR*RGRRAA
Trigger: TGCTGCGCGCCTTCCCCGTCAACGCTGCCACCTTCG...CTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp AAGCCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTGAGGATCCAGTTCTGTaGCACCAGGAGGCACACCAA +
Preference number: 4 (lower is better)
Translates to: KPSVVFTEHIPQDAWCSPEDPVL*HQEAHQ
Trigger: TTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTC...AGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp GCCTCAGTTTCCAGGATAACGGTGCAATGGCCTCAGCCAGGCCAGGTGCTGGCTCAGCTGCATCACACTTaGACTGTCCAGACCTCCACC +
Preference number: 4 (lower is better)
Translates to: ASVSRITVQWPQPGQVLAQLHHT*TVQTST
Trigger: GGTGGAGGTCTGGACAGTTCAAGTGTGATGCAGCTG...AGCCAGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp AAGCCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCAGCTGCATCACACTTaGACTGTCCAGACCTCCACC +
Preference number: 4 (lower is better)
Translates to: KPSVVFTEHIPQDAWCSPQLHHT*TVQTST
Trigger: GGTGGAGGTCTGGACAGTTCAAGTGTGATGCAGCTG...AGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp GTCTGCCTCAGTTTCCAGGATAACGGTGCAATGGCCTCAGCCAGGCCAGGTGCTGGGGAGCAGAGGGACTaGCCTTTGGCTTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: VCLSFQDNGAMASARPGAGEQRD*PLASLW
Trigger: CCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCCC...AGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp CACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGGTGGCCCACCACCCCAGTGTCGTCTTCACTaGGCACATTCCCCAGGACGC +
Preference number: 4 (lower is better)
Translates to: HTKFSSVPNTDQRGGPPPQCRLH*AHSPGR
Trigger: GCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTG...GGGTGGTGGGCCACCCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp CCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACCCTCAAGACAACTGCTCCCTaGTTATTGCTGTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: PPADSMASRRVQGPQFTLKTTAP*LLLCPR
Trigger: CCTTGGACACAGCAATAATCAGGGAGCAGTTGTCTT...GAGGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR TCA 90 bp CGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGGCAGAGGATGCAGTaGGGTCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: RSIPAGSRAIDSGANLCPRQRMQ*GHATAL
Trigger: GAGTGCAGTGGCATGACCTCACTGCATCCTCTGCCT...GGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp TGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACCCAGCACGCTCTCTTaGTTGATGATGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: WCLQQTPWLPGGCRVPSSPSTLS*LMMDLK
Trigger: CTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGG...TGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp TTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCAGCCCCAGCACGCTCTCTTaGTTGATGATGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: LMKVSPMSGEPRPLYRPSPSTLS*LMMDLK
Trigger: CTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGG...GCTGGGCCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR GCA 90 bp GGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACGGAGGGTGTTGCCCTaGACCCCGAACACCAGCGCG +
Preference number: 4 (lower is better)
Translates to: GSSSVTPGGTPSFPLSLTRRVLP*TPNTSA
Trigger: CGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCG...TGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp ATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCGGGCCCGGAGGGTGTTaGCCTGCACCCCGAACACCA +
Preference number: 4 (lower is better)
Translates to: MQRIQFCDTRRHTKFSSVGPGGC*PAPRTP
Trigger: TGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCC...GACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp TTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGCCCGCGTCCTGCAGCTaGAGCCGCGTCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FIPLTVSVQRHQAVQSPVPASCS*SRVLAS
Trigger: GCTGGCCAAGACGCGGCTGCAGCTGCAGGACGCGGG...CACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp CCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGGTTTCTAGAGCCAGGACACGATaGCTGACGTACCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: PSRKQGNRLRGQFMSQVSRARTR*LTYRPP
Trigger: TGGCGGGCGGTACGTCAGGCATCGTGTCCTGGCTCT...AGAAACCTGGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp GCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGAGCCAGGACACGATaGCTGACGTACCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: AKFSPRLIDSTARSIPAGRARTR*LTYRPP
Trigger: TGGCGGGCGGTACGTCAGGCATCGTGTCCTGGCTCT...TCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp TTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACGCAGTCCGTCCGCCTaGAGCCGCGACTTGACCACG +
Preference number: 4 (lower is better)
Translates to: LTVSVQRHQAVQSPVSSSRSPSA*SRDLTT
Trigger: CGTGGTCAAGTCGCGGCTGCAGGCGGACGGACTGCG...TGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp AGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCGGTGCAGCCCTCCTCTaGCCCAGGCCCCAACTAGCC +
Preference number: 4 (lower is better)
Translates to: SSVTPGGTPSFPLSLTQTGAALL*PRPQLA
Trigger: GGCTAGTTGGGGCCTGGGGCAGAGGAGGGCTGCACC...GGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp GCAGTGCAACGTCCCGCGGTACTGAGGCTTCTCCACGCTCTGGACCTGAAGCCGCTGCTCCCTGATTATTaGTGTGTCCAAGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: AVQRPAVLRLLHALDLKPLLPDY*CVQGSR
Trigger: CCTGCTTCCTTGGACACAGCAATAATCAGGGAGCAG...CGGCTTCAGGTCCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTTGCACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556868.1
CDS-3UTR GCA 90 bp CGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCACAGACACTGGTGAATaGCCAAGTCCAGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: RSIPAGSRAIDSGANLCPTDTGE*PSPAGW
Trigger: CCAGCCGGCTGGACTTGGGCATTCACCAGTGTCTGT...GGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp GTGGGCCGGAGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACAGGCTGCACAGTGCACTaGCAGTGGGGCATGAACGAC +
Preference number: 4 (lower is better)
Translates to: VGRRLSCPSAGHVPILWTGCTVH*QWGMND
Trigger: GTCGTTCATGCCCCACTGGCAGTGCACTGTGCAGCC...TGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCTCCGGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp AGGCCCTTGTACAGGCCCAGCACGCTCTCTTGCTTGATGATGGACTTGAAGCAGGCACCTGCCAGGAACTaGTTGAGGGGCGAGTCGTGG +
Preference number: 4 (lower is better)
Translates to: RPLYRPSTLSCLMMDLKQAPARN*LRGESW
Trigger: CCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGC...CTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGGCCTGTACAAGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CCA 90 bp GTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGGCACCTGCCAGGAACTaGTTGAGGGGCGAGTCGTGG +
Preference number: 4 (lower is better)
Translates to: VTPGGTPSFPLSLTQTRGAPARN*LRGESW
Trigger: CCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGC...CCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp ATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCAGCAGATGACGCACTaGATGGCGCCCGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: MQRIQFCDTRRHTKFSSVQQMTH*MAPAAA
Trigger: TGCGGCGGCGGGCGCCATCCAGTGCGTCATCTGCTG...GACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp ATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCTTGTAGGTGCGCGCTaGGCCCGCGTCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: MQRIQFCDTRRHTKFSSVLVGAR*ARVLQL
Trigger: CAGCTGCAGGACGCGGGCCCAGCGCGCACCTACAAG...GACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp GGTACCCCTAGCAGTGGCATGTGGAGAAGCTGGGGTATGCAGAGGATCCAGTTCAGTAGACGCCGAAGCTaGGCGTCTCACGCAGCAACG +
Preference number: 4 (lower is better)
Translates to: GTPSSGMWRSWGMQRIQFSRRRS*ASHAAT
Trigger: CGTTGCTGCGTGAGACGCCCAGCTTCGGCGTCTACT...GAACTGGATCCTCTGCATACCCCAGCTTCTCCACATGCCACTGCTAGGGGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp AGGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGGGAGTTAGAGGTCCCTaGGTGGCCCCTTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: RPRGGRISPCHSCITLELGVRGP*VAPWLA
Trigger: GGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCC...CAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp AGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCAGGCATGTGGAGAAGCTaGGGTATGCAGAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: SPRLIDSTARSIPAGSRAGMWRS*GMQRIQ
Trigger: CTGGATCCTCTGCATACCCCAGCTTCTCCACATGCC...TGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp CCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTCCTAGCAGTGGCATGTaGAGAAGCTGGGGTATGCAG +
Preference number: 4 (lower is better)
Translates to: PQLAASQQEAGQSTQGPIPSSGM*RSWGMQ
Trigger: CTGCATACCCCAGCTTCTCCACATGCCACTGCTAGG...AATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp GTCTGCCTCAGTTTCCAGGATAACGGTGCAATGGCCTCAGCCAGGCCAGGTGCTTCCCGCAGGCTGATATaGTGCCTCCAGCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: VCLSFQDNGAMASARPGASRRLI*CLQQTP
Trigger: TGGAGTCTGCTGGAGGCACCATATCAGCCTGCGGGA...AGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp GTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGCACTTTGGGGGATCCTaGCTGGCGGTGGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VTPGGTPSFPLSLTQTRGHFGGS*LAVVGG
Trigger: CCCACCTACCACCGCCAGCCAGGATCCCCCAAAGTG...CCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CAACTAGCCACCCCTGTGCCCACTAGCAGGCCCTGTGCCTTCACAGGGATGAAGTGGCTTCTTTGTGGCTaGAGGTGTTCCAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: QLATPVPTSRPCAFTGMKWLLCG*RCSRPG
Trigger: ACCAGGCCTGGAACACCTCCAGCCACAAAGAAGCCA...CTTCATCCCTGTGAAGGCACAGGGCCTGCTAGTGGGCACAGGGGTGGCTAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp GGGAGGCACCGTTTGCTGGGGAGCAGAGGGACTGACCTTTGGCTTCTTTGTGGCTGGCTTCTTTGTGGCTaGAGGTGTTCCAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: GRHRLLGSRGTDLWLLCGWLLCG*RCSRPG
Trigger: ACCAGGCCTGGAACACCTCCAGCCACAAAGAAGCCA...GCCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp GGTACCCCTAGCAGTGGCATGTGGAGAAGCTGGGGTATGCAGAGGATCCAGTTCGGCACTGAGAATGCCTaGGAGGCACCGTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GTPSSGMWRSWGMQRIQFGTENA*EAPFAG
Trigger: CCCAGCAAACGGTGCCTCCCAGGCATTCTCAGTGCC...GAACTGGATCCTCTGCATACCCCAGCTTCTCCACATGCCACTGCTAGGGGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp GCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCGTTACACTTTTGCTATaGATGGAGACAGCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: ALMKVSPMSGEPRPLYRPVTLLL*METAPS
Trigger: GCTAGGGGCTGTCTCCATCCATAGCAAAAGTGTAAC...GGGCCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556868.1
CDS-3UTR CCA 90 bp CGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGCCAACAACCTCCTTaGGGACCCACGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RSIPAGSRAIDSGANLCPSQQPP*GPTSAA
Trigger: AGCTGCTGACGTGGGTCCCCAAGGAGGTTGTTGGCT...GGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp TTCTCTGCTGAGCCCTCTGCACACTTTGGGGGATCCTGGCTGGCGGTGGTAGGTCACTGCACTCCAGCCTaGGCGAGAAAGGAACATTCC +
Preference number: 4 (lower is better)
Translates to: FSAEPSAHFGGSWLAVVGHCTPA*ARKEHS
Trigger: GGAATGTTCCTTTCTCGCCCAGGCTGGAGTGCAGTG...ACCTACCACCGCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGCTCAGCAGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp GGAGGATGTGTGGAGTTAGAGGTCCCTGGGTGGCCCCTTGGTTGGCCATCAGAGTGTCCCATCAGAGACTaGCTTCGAGGCAATAGGCGC +
Preference number: 4 (lower is better)
Translates to: GGCVELEVPGWPLGWPSECPIRD*LRGNRR
Trigger: GCGCCTATTGCCTCGAAGCCAGTCTCTGATGGGACA...CTCTGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACATCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp AGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACAGGCAGCCTGCCCAGCTCCCGGGTCTaGTGCTTAGGCTGCCTAGGA +
Preference number: 4 (lower is better)
Translates to: RLSCPSAGHVPILWTGSLPSSRV*CLGCLG
Trigger: TCCTAGGCAGCCTAAGCACCAGACCCGGGAGCTGGG...CAGGCTGCCTGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp GTTGCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCACTTTTGCTATGGATaGAGACAGCCCCTTGACCGT +
Preference number: 4 (lower is better)
Translates to: VALHPEHQRVDEGEPHERHFCYG*RQPLDR
Trigger: ACGGTCAAGGGGCTGTCTCCATCCATAGCAAAAGTG...CCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR TCA 90 bp TTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACAGGGCAGGAGCACAATaGCGTGGCCAGGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: FCTATPGCAKPSVVFTEHRAGAQ*RGQDPR
Trigger: TCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCT...GTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp GTCTGCCTCAGTTTCCAGGATAACGGTGCAATGGCCTCAGCCAGGCCAGGTGCTGAGGATCCAGTTCTGTaGCACCAGGAGGCACACCAA +
Preference number: 4 (lower is better)
Translates to: VCLSFQDNGAMASARPGAEDPVL*HQEAHQ
Trigger: TTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTC...AGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp GCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGGTCAGTGTCGTCTTCACTaGGCACATTCCCCAGGACGC +
Preference number: 4 (lower is better)
Translates to: ASQQEAGQSTQGPIYVPGQCRLH*AHSPGR
Trigger: GCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTG...ACCTGGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp AGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGAAGACAACTGCTCCCTaGTTATTGCTGTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SALMKVSPMSGEPRPLYRKTTAP*LLLCPR
Trigger: CCTTGGACACAGCAATAATCAGGGAGCAGTTGTCTT...CCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556868.1
CDS-3UTR TCA 90 bp GAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGACCGAGAGACCCCCACATaGGGACCCCCAATCCAGAGG +
Preference number: 4 (lower is better)
Translates to: EAEGFLLATAASHLNCPDRETPT*GPPIQR
Trigger: CCTCTGGATTGGGGGTCCTCATGTGGGGGTCTCTCG...GTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR TCA 90 bp CTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCACTCTCCTTTGAGGATTaGTGGGAACGGACCCACCCC +
Preference number: 4 (lower is better)
Translates to: LIDSTARSIPAGSRAIDSLSFED*WERTHP
Trigger: GGGGTGGGTCCGTTCCCATCAATCCTCAAAGGAGAG...TGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR TCA 90 bp ATGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACCTGGGTAGTGTTGTaGAGTCTTTGCAGATCACAG +
Preference number: 4 (lower is better)
Translates to: MVPPADSMASRRVQGPQFTWVVL*SLCRSQ
Trigger: CTGTGATCTGCAAAGACTTCACAACACTACCCAGGT...GAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp TTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGGGGCCCGGAGGGTGTTaGCCTGCACCCCGAACACCA +
Preference number: 4 (lower is better)
Translates to: FIPLTVSVQRHQAVQSPVGPGGC*PAPRTP
Trigger: TGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCC...CACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp GAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGACAGAGCCAGGACACGATaGCTGACGTACCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: EAEGFLLATAASHLNCPDRARTR*LTYRPP
Trigger: TGGCGGGCGGTACGTCAGGCATCGTGTCCTGGCTCT...GTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp GGAGGATGTGTGGAGTTAGAGGTCCCTGGGTGGCCCCTTGGTTGGCCATCAGAGGGAGAAGCTGGGGTATaGAGAGGATCCAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: GGCVELEVPGWPLGWPSEGEAGV*RGSSSV
Trigger: CACAGAACTGGATCCTCTGCATACCCCAGCTTCTCC...CTCTGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACATCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp CCGGGTGGAGGATGTGTGGAGTTAGAGGTCCCTGGGTGGCCCCTTGGTTGGCCAGGAAGGATTTCTCCTTaGCACAGCTGCATCACACTT +
Preference number: 4 (lower is better)
Translates to: PGGGCVELEVPGWPLGWPGRISP*HSCITL
Trigger: AAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCC...TGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACATCCTCCACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp CCTGAAGCCGTACTAGCGCTCTCCAGGGTGAGGCTTACGCCCATCTACAACAAACGTGTGAAGGCCGTGTaGTTCAGGACGGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PEAVLALSRVRLTPIYNKRVKAV*FRTVAV
Trigger: CACAGCCACCGTCCTGAAGCACACGGCCTTCACACG...TTTGTTGTAGATGGGCGTAAGCCTCACCCTGGAGAGCGCTAGTACGGCTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556868.1
CDS-3UTR GCA 90 bp CCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCCTCTGCTCCCTGATTATTaGTGTGTCCAAGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: PSVVFTEHIPQDAWCSPPLLPDY*CVQGSR
Trigger: CCTGCTTCCTTGGACACAGCAATAATCAGGGAGCAG...AGGAGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp CCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGCACCTGCCAGGAACTaGTTGAGGGGCGAGTCGTGG +
Preference number: 4 (lower is better)
Translates to: PEAEGFLLATAASHLNCPAPARN*LRGESW
Trigger: CCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGC...TGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp GTGGGCCGGAGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACAAGCCAGGCCAGGTGCTaGCTGCTGCTGGGAATAATC +
Preference number: 4 (lower is better)
Translates to: VGRRLSCPSAGHVPILWTSQARC*LLLGII
Trigger: GATTATTCCCAGCAGCAGCCAGCACCTGGCCTGGCT...TGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCTCCGGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp GGGAGGCACCGTTTGCTGGGGAGCAGAGGGACTGACCTTTGGCTTCTTTGTGGCATCCCAGAAAGGGGCTaGAGTGTCTGCCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GRHRLLGSRGTDLWLLCGIPERG*SVCLSF
Trigger: GAAACTGAGGCAGACACTCCAGCCCCTTTCTGGGAT...GCCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAGGAGTGGCAGCAGCTaGGGTACCCCTAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: QRIQFCDTRRHTKFSSVPRSGSS*GTPSSG
Trigger: GCCACTGCTAGGGGTACCCCAGCTGCTGCCACTCCT...AGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp ATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCAGACCTCCACCGCTaGCCTGTTTGCTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: MQRIQFCDTRRHTKFSSVPDLHR*PVCSPP
Trigger: GGGTGGGGAGCAAACAGGCCAGCGGTGGAGGTCTGG...GACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTCACTTTGGGGGATCCTaGCTGGCGGTGGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: QRIQFCDTRRHTKFSSVPHFGGS*LAVVGG
Trigger: CCCACCTACCACCGCCAGCCAGGATCCCCCAAAGTG...AGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp AAGCCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTAGAGGGACTGACCTTTaGCTTCTTTGTGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KPSVVFTEHIPQDAWCSPRGTDL*LLCGWR
Trigger: CCTCCAGCCACAAAGAAGCCAAAGGTCAGTCCCTCT...AGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp TTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCAATTCCCCAGGACGCCTaGTGCAGCCCTCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LTVSVQRHQAVQSPVSSSIPQDA*CSPPLP
Trigger: GGGCAGAGGAGGGCTGCACCAGGCGTCCTGGGGAAT...TGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp AGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCATTCCCCAGGACGCCTaGTGCAGCCCTCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SSVTPGGTPSFPLSLTQTIPQDA*CSPPLP
Trigger: GGGCAGAGGAGGGCTGCACCAGGCGTCCTGGGGAAT...GGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp ATGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCAAATCAAGGCTGCAGTaGGCTATGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: MVPPADSMASRRVQGPQFKSRLQ*AMIAPL
Trigger: CAGTGGTGCAATCATAGCCCACTGCAGCCTTGATTT...GAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp AGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCAGAACGGACCCACCCCTaGGAAACTAGTCATTTGGAC +
Preference number: 4 (lower is better)
Translates to: SPRLIDSTARSIPAGSRAERTHP*ETSHLD
Trigger: GTCCAAATGACTAGTTTCCCAGGGGTGGGTCCGTTC...TGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp CCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAAGCACCCTCCCACCCTaGAGGCCCAGTTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PEAEGFLLATAASHLNCPSTLPP*RPSSWP
Trigger: TGGCCAAGAACTGGGCCTCCAGGGTGGGAGGGTGCT...TGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp GTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGAAAGGGACAGGCTGCTaGAGACAGGGTAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: VTPGGTPSFPLSLTQTRGKGTGC*RQGRGS
Trigger: GGACCCCCTACCCTGTCTCCAGCAGCCTGTCCCTTT...CCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR TCA 90 bp GTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGCCTGAAGCCGTACCTTaGCCGTGTCAAACGGGTGTC +
Preference number: 4 (lower is better)
Translates to: VTPGGTPSFPLSLTQTRGPEAVP*PCQTGV
Trigger: GACACCCGTTTGACACGGTCAAGGTACGGCTTCAGG...CCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359232.8
CDS-3UTR TCA 90 bp TTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGCCAGGACACGATGCCTaGCGTACCGCCCGCCAACAG +
Preference number: 4 (lower is better)
Translates to: FIPLTVSVQRHQAVQSPVPGHDA*RTARQQ
Trigger: CTGTTGGCGGGCGGTACGTCAGGCATCGTGTCCTGG...CACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp TTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACCTGCAGCCGCGACTTaGCCACGTCCACAGGATAGG +
Preference number: 4 (lower is better)
Translates to: LTVSVQRHQAVQSPVSSSPAAAT*PRPQDR
Trigger: CCTATCCTGTGGACGTGGTCAAGTCGCGGCTGCAGG...TGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp CAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAGGGCAGGAGCACAATaGCGTGGCCAGGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: QRIQFCDTRRHTKFSSVPRAGAQ*RGQDPR
Trigger: TCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCT...AGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp AGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACAGGCAGCCTGGGGGAGCAGAGGGACTaGCCTTTGGCTTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: RLSCPSAGHVPILWTGSLGEQRD*PLASLW
Trigger: CCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCCC...CAGGCTGCCTGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp CTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCATGAAGCCCTGGCACTaGGAATGCCTGGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: LISKIQPTSDRLHSSQHPMKPWH*ECLGGT
Trigger: GGTGCCTCCCAGGCATTCTCAGTGCCAGGGCTTCAT...GGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp CCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGGTTTCTTGTCATACTGCTGAGTaGGCGGCCCATGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: PSRKQGNRLRGQFMSQVSCHTAE*AAHVPD
Trigger: GTCTGGGACATGGGCCGCTCACTCAGCAGTATGACA...AGAAACCTGGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp AAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCTCAGCCAGGCCAGGTaGTGGCTGCTGCTGGGAATA +
Preference number: 4 (lower is better)
Translates to: KIQPTSDRLHSSQHPSRKLSQAR*WLLLGI
Trigger: TATTCCCAGCAGCAGCCAGCACCTGGCCTGGCTGAG...CTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp CACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGGTGGCCCACCACCCGGAGAAGCTGGGGTATaGAGAGGATCCAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: HTKFSSVPNTDQRGGPPPGEAGV*RGSSSV
Trigger: CACAGAACTGGATCCTCTGCATACCCCAGCTTCTCC...GGGTGGTGGGCCACCCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp CAACTAGCCACCCCTGTGCCCACTAGCAGGCCCTGTGCCTTCACAGGGATGAAGTCTCCTTGCCACAGCTaGATCACACTTGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: QLATPVPTSRPCAFTGMKSPCHS*ITLELS
Trigger: GGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGA...CTTCATCCCTGTGAAGGCACAGGGCCTGCTAGTGGGCACAGGGGTGGCTAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp TTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGGGAGGCACCGTTTaGTGGGGAGCAGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: LTVSVQRHQAVQSPVSSSLGGTV*WGAEGL
Trigger: CAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCCCAG...TGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp ATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCAGCACGACAAAGTTACACTTTTaGTATGGATGGAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: MKVSPMSGEPRPLYRPSTTKLHF*YGWRQP
Trigger: GGGCTGTCTCCATCCATAGCAAAAGTGTAACTTTGT...CGTGCTGGGCCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR GCA 90 bp GTGGGCCGGAGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACACGGCATTGGGACAACTaGCCCCATTTCCAAGATGGG +
Preference number: 4 (lower is better)
Translates to: VGRRLSCPSAGHVPILWTRHWDN*PHFQDG
Trigger: CCCATCTTGGAAATGGGGGCAGTTGTCCCAATGCCG...TGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCTCCGGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp GGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTTGGGCCGGGTATCTATaGCTTCTCAGGATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: GPEAEGFLLATAASHLNCWAGYL*LLRMGC
Trigger: GCACCCCATCCTGAGAAGGCATAGATACCCGGCCCA...ACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp AAAACTACCCAGCTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCAGGCGCGGTCAGGGATaGTGGGGATGGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KTTQLISKIQPTSDRLHSRRGQG*WGWRQQ
Trigger: CTGCTGCCGCCATCCCCACCATCCCTGACCGCGCCT...GCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAGCTGGGTAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359232.8
ENST00000392908.7
CDS-3UTR CCA 90 bp CAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAGTAGACGCCGAAGCTaGGCGTCTCACGCAGCAACG +
Preference number: 4 (lower is better)
Translates to: QRIQFCDTRRHTKFSSVPSRRRS*ASHAAT
Trigger: CGTTGCTGCGTGAGACGCCCAGCTTCGGCGTCTACT...AGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp AAAACTACCCAGCTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCGTGAGCGTCACAGGCTaGAGGGCTGCGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: KTTQLISKIQPTSDRLHSVSVTG*RAAPGQ
Trigger: CTGCCCTGGCGCAGCCCTCCAGCCTGTGACGCTCAC...GCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAGCTGGGTAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp CTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGCATGTGGAGAAGCTaGGGTATGCAGAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: LIDSTARSIPAGSRAIDSGMWRS*GMQRIQ
Trigger: CTGGATCCTCTGCATACCCCAGCTTCTCCACATGCC...TGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp GTGGGCCGGAGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACACCTAGCAGTGGCATGTaGAGAAGCTGGGGTATGCAG +
Preference number: 4 (lower is better)
Translates to: VGRRLSCPSAGHVPILWTPSSGM*RSWGMQ
Trigger: CTGCATACCCCAGCTTCTCCACATGCCACTGCTAGG...TGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCTCCGGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp GGTACCCCTAGCAGTGGCATGTGGAGAAGCTGGGGTATGCAGAGGATCCAGTTCCCTAGCAGTGGCATGTaGAGAAGCTGGGGTATGCAG +
Preference number: 4 (lower is better)
Translates to: GTPSSGMWRSWGMQRIQFPSSGM*RSWGMQ
Trigger: CTGCATACCCCAGCTTCTCCACATGCCACTGCTAGG...GAACTGGATCCTCTGCATACCCCAGCTTCTCCACATGCCACTGCTAGGGGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp GGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTTCCCGCAGGCTGATATaGTGCCTCCAGCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: GPEAEGFLLATAASHLNCSRRLI*CLQQTP
Trigger: TGGAGTCTGCTGGAGGCACCATATCAGCCTGCGGGA...ACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp ATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCGCTGGCGGTGGTAGGTaGGCCGGAGACTCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: MQRIQFCDTRRHTKFSSVAGGGR*AGDSVV
Trigger: GACAACTGAGTCTCCGGCCCACCTACCACCGCCAGC...GACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp TTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCAGGAGGCACCGTTTGCTaGGGAGCAGAGGGACTGACC +
Preference number: 4 (lower is better)
Translates to: LTVSVQRHQAVQSPVSSSGGTVC*GAEGLT
Trigger: GGTCAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCC...TGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp GGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTTGTGCTTCAGGACGGTaGCTGTGGTTCTGGGCGCTA +
Preference number: 4 (lower is better)
Translates to: GPEAEGFLLATAASHLNCCASGR*LWFWAL
Trigger: TAGCGCCCAGAACCACAGCCACCGTCCTGAAGCACA...ACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp GTATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCATGCCCAGGGATaGCCGGTCACCCCCTCATCA +
Preference number: 4 (lower is better)
Translates to: VCRGSSSVTPGGTPSFPLSHAQG*PVTPSS
Trigger: TGATGAGGGGGTGACCGGCCATCCCTGGGCATGGGA...CAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp GGAGGATGTGTGGAGTTAGAGGTCCCTGGGTGGCCCCTTGGTTGGCCATCAGAGCACTTTTGCTATGGATaGAGACAGCCCCTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GGCVELEVPGWPLGWPSEHFCYG*RQPLAQ
Trigger: CTGAGCTAGGGGCTGTCTCCATCCATAGCAAAAGTG...CTCTGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACATCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp CTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCCGAGCCCTTGCTCTCTaGGAGAGGAACTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LISKIQPTSDRLHSSQHPRALAL*ERNCGP
Trigger: TGGGCCACAGTTCCTCTCCCAGAGAGCAAGGGCTCG...GGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp CAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTCTTCTCCCACCAATGTaGGCAGAGGCCTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: QRIQFCDTRRHTKFSSVPLLPPM*AEASPH
Trigger: GTGGGGAGAGGCCTCTGCCCACATTGGTGGGAGAAG...AGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp CCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGGTTTCTATGTTCTGGGGCCTCTaGGGGGATCTCTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSRKQGNRLRGQFMSQVSMFWGL*GDLCSS
Trigger: GGAGGAACAGAGATCCCCCCAGAGGCCCCAGAACAT...AGAAACCTGGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp CAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTTGCCTCCGAGCCCAGTaGCCCAGAACCTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: QRIQFCDTRRHTKFSSVPCLRAQ*PRTSSM
Trigger: CATGGAAGAGGTTCTGGGCCACTGGGCTCGGAGGCA...AGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp GCAACGTCCCGCGGTACTGAGGCTTCTCCACGCTCTGGACCTGAAGCCGTACTACACTTTTGCTATGGATaGAGACAGCCCCTTGACCGT +
Preference number: 4 (lower is better)
Translates to: ATSRGTEASPRSGPEAVLHFCYG*RQPLDR
Trigger: ACGGTCAAGGGGCTGTCTCCATCCATAGCAAAAGTG...TAGTACGGCTTCAGGTCCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
3UTR CAA 72 bp GCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTaGAACTGTCCAGACCTCCACCGCTGGCCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: AEGFLLATAASH*NCPDLHRWPVC
Trigger: GCAAACAGGCCAGCGGTGGAGGTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp GCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGATATGTCCCAGGTTTCTaGGAAGGAGCCCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: AKFSPRLIDSTARSIPAGYVPGF*EGALGK
Trigger: CTTCCCCAGGGCTCCTTCTCAGAAACCTGGGACATA...TCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp GGGAGGCACCGTTTGCTGGGGAGCAGAGGGACTGACCTTTGGCTTCTTTGTGGCCCAAAACTACCCAGCTaGTCAGCAAAATTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GRHRLLGSRGTDLWLLCGPKLPS*SAKFSP
Trigger: TGGGCTGAATTTTGCTGATCAGCTGGGTAGTTTTGG...GCCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp GGAGGATGTGTGGAGTTAGAGGTCCCTGGGTGGCCCCTTGGTTGGCCATCAGAGCCAAAACTACCCAGCTaGTCAGCAAAATTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GGCVELEVPGWPLGWPSEPKLPS*SAKFSP
Trigger: TGGGCTGAATTTTGCTGATCAGCTGGGTAGTTTTGG...CTCTGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACATCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp TCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAAGGGCAGGAGCACAATaGCGTGGCCAGGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: SVTPGGTPSFPLSLTQTRRAGAQ*RGQDPR
Trigger: TCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCT...TCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp ATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAGTCCCGCAGGCTaGTATGGTGCCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: MQRIQFCDTRRHTKFSSVPSPAG*YGASSR
Trigger: TCTGCTGGAGGCACCATATCAGCCTGCGGGACTAGG...GACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp TTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCAATGAAGCCCTGGCACTaGGAATGCCTGGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: LTVSVQRHQAVQSPVSSSMKPWH*ECLGGT
Trigger: GGTGCCTCCCAGGCATTCTCAGTGCCAGGGCTTCAT...TGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp CCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGGTTTCTTCCTCTCCAGGGACATaGGCAGCTGTGTTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: PSRKQGNRLRGQFMSQVSSSPGT*AAVLLR
Trigger: TCTGAGCAACACAGCTGCTCATGTCCCTGGAGAGGA...AGAAACCTGGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR TCA 90 bp GGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTGGTGGGAGAATTGCTTaGACCCGTGAGGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: GPEAEGFLLATAASHLNCGGRIA*TREAED
Trigger: ATCCTCTGCCTCACGGGTTCAAGCAATTCTCCCACC...ACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR TCA 90 bp CACTTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAAAGGAGAGGGTCCAGTaGGAGGCAGGCAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: HFIPLTVSVQRHQAVQSPKERVQ*EAGRQD
Trigger: GTCCTGCCTGCCTGCCTCTCACTGGACCCTCTCCTT...TGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp GTCTGCCTCAGTTTCCAGGATAACGGTGCAATGGCCTCAGCCAGGCCAGGTGCTCCCAGCACGCTCTCTTaGTTGATGATGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: VCLSFQDNGAMASARPGAPSTLS*LMMDLK
Trigger: CTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGG...AGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp GCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGGTGGAGAAGCTGGGGTATaGAGAGGATCCAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: ASQQEAGQSTQGPIYVPGGEAGV*RGSSSV
Trigger: CACAGAACTGGATCCTCTGCATACCCCAGCTTCTCC...ACCTGGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp CGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCTCTCCTTGCCACAGCTaGATCACACTTGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: RSIPAGSRAIDSGANLCPSPCHS*ITLELS
Trigger: GGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGA...GGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp TTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCAGCATAGGTCAAGACAACTaGTCCCTGATTATTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LMKVSPMSGEPRPLYRPSIGQDN*SLIIAV
Trigger: CACAGCAATAATCAGGGAGCAGTTGTCTTGACCTAT...GCTGGGCCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556868.1
CDS-3UTR GCA 90 bp TTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACTCTGTGACGAGCCCTTaGTCTCTGGGAGAGGAACTG +
Preference number: 4 (lower is better)
Translates to: FCTATPGCAKPSVVFTEHSVTSP*SLGEEL
Trigger: CAGTTCCTCTCCCAGAGAGCAAGGGCTCGTCACAGA...GTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp AGGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGGATCTCTGTTCCTCCTaGAGCCCCAACACTGGCACT +
Preference number: 4 (lower is better)
Translates to: RPRGGRISPCHSCITLELDLCSS*SPNTGT
Trigger: AGTGCCAGTGTTGGGGCTGCAGGAGGAACAGAGATC...CAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp ATGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCTCTTCCATGTCAAAGTaGTCTTTGTTGCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: MVPPADSMASRRVQGPQFSSMSK*SLLPMS
Trigger: GCTCATAGGCAACAAAGAGCACTTTGACATGGAAGA...GAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp TCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGTGAGGTCATGCCACTaGACTCCAGCCTGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: SVTPGGTPSFPLSLTQTRVRSCH*TPAWAR
Trigger: TCTCGCCCAGGCTGGAGTGCAGTGGCATGACCTCAC...TCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp GAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGACAGGATAACGGTGCAATaGCCTCAGCCAGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: EAEGFLLATAASHLNCPDRITVQ*PQPGQV
Trigger: CACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCT...GTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp GCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGGAGCACAATGACGTaGCCAGGATCCCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: AKFSPRLIDSTARSIPAGRSTMT*PGSQKG
Trigger: CCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCT...TCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp GCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAGGCATGTGGAGAAGCTaGGGTATGCAGAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: AKFSPRLIDSTARSIPAGGMWRS*GMQRIQ
Trigger: CTGGATCCTCTGCATACCCCAGCTTCTCCACATGCC...TCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp AGGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGCCTTTGGCTTCTTTGTaGCTGGAGGTGTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RPRGGRISPCHSCITLELPLASL*LEVFQA
Trigger: GGCCTGGAACACCTCCAGCCACAAAGAAGCCAAAGG...CAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp TTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCAGGCACTGAGAATGCCTaGGAGGCACCGTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LTVSVQRHQAVQSPVSSSGTENA*EAPFAG
Trigger: CCCAGCAAACGGTGCCTCCCAGGCATTCTCAGTGCC...TGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGCACTGAGAATGCCTGGGAGGAGGAGATCCAGATCTTaGATTCTTTCAGTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: QALCLHRDEALALRMPGRRRSRS*ILSVPR
Trigger: CCTTGGGACTGAAAGAATCCAAGATCTGGATCTCCT...CCTCCCAGGCATTCTCAGTGCCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp AAGCCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCAATTATCTCGGCATTaGGACAACTGCCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: KPSVVFTEHIPQDAWCSPQLSRH*DNCPHF
Trigger: GAAATGGGGGCAGTTGTCCCAATGCCGAGATAATTG...AGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp GCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGGTAGTTCAAGACCAGCCTaGCCAACGTGGCGAAATCGT +
Preference number: 4 (lower is better)
Translates to: ASQQEAGQSTQGPIYVPGSSRPA*PTWRNR
Trigger: ACGATTTCGCCACGTTGGCCAGGCTGGTCTTGAACT...ACCTGGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp AGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCACTCTTGTTTACACTATaGCTGCACAGTGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: SPRLIDSTARSIPAGSRALLFTL*LHSALP
Trigger: TGGCAGTGCACTGTGCAGCCATAGTGTAAACAAGAG...TGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR TCA 90 bp AAAACTACCCAGCTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCAACGTCCCGCGGTACTaGGGCTTCTCCACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: KTTQLISKIQPTSDRLHSNVPRY*GFSTLW
Trigger: CCAGAGCGTGGAGAAGCCTCAGTACCGCGGGACGTT...GCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAGCTGGGTAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp AAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGGAGGATCCAGTTCTGTaGCACCAGGAGGCACACCAA +
Preference number: 4 (lower is better)
Translates to: KIQPTSDRLHSSQHPSRKEDPVL*HQEAHQ
Trigger: TTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTC...CTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp AGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACAGGCAGCCTGCATACTGTTCTCTGCTaGGCCCTCTGCACACTTTGG +
Preference number: 4 (lower is better)
Translates to: RLSCPSAGHVPILWTGSLHTVLC*ALCTLW
Trigger: CCAAAGTGTGCAGAGGGCTCAGCAGAGAACAGTATG...CAGGCTGCCTGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp GGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCATACTGTTCTCTGCTaGGCCCTCTGCACACTTTGG +
Preference number: 4 (lower is better)
Translates to: GPEAEGFLLATAASHLNCHTVLC*ALCTLW
Trigger: CCAAAGTGTGCAGAGGGCTCAGCAGAGAACAGTATG...ACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp ATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCGGGGAGCAGAGGGACTaGCCTTTGGCTTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: MQRIQFCDTRRHTKFSSVGEQRD*PLASLW
Trigger: CCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCCC...GACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp CAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGCACTGAGAATGCCTGGGAGGAACACTTTATTCCCTTaGCAGTTTCTGTACAGCGAC +
Preference number: 4 (lower is better)
Translates to: QALCLHRDEALALRMPGRNTLFP*QFLYSD
Trigger: GTCGCTGTACAGAAACTGTCAAGGGAATAAAGTGTT...CCTCCCAGGCATTCTCAGTGCCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp GCGCTCTCCAGGGTGAGGCTTACGCCCATCTACAACAAAGTTACACTTTTGCTACAGTCCCAAGGGCCTTaGCCGTGTCAAACGGGTGTC +
Preference number: 4 (lower is better)
Translates to: ALSRVRLTPIYNKVTLLLQSQGP*PCQTGV
Trigger: GACACCCGTTTGACACGGTCAAGGCCCTTGGGACTG...TAGCAAAAGTGTAACTTTGTTGTAGATGGGCGTAAGCCTCACCCTGGAGAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556868.1
CDS-3UTR TCA 90 bp TGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCAGCTCTTTGTTGCCTATaGGCTTATCTTTGCTCAATA +
Preference number: 4 (lower is better)
Translates to: WCLQQTPWLPGGCRVPSSALCCL*AYLCSI
Trigger: TATTGAGCAAAGATAAGCTCATAGGCAACAAAGAGC...TGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR TCA 90 bp CACTTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCATGTCCCAGACTAGGCTaGAGGGCCCCTGCCCTAATG +
Preference number: 4 (lower is better)
Translates to: HFIPLTVSVQRHQAVQSPCPRLG*RAPALM
Trigger: CATTAGGGCAGGGGCCCTTCAGCCTAGTCTGGGACA...TGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp CCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGGTTTCTAGGGGCTGGAGTGTCTaGCTCAGTTTCCAGGATAAC +
Preference number: 4 (lower is better)
Translates to: PSRKQGNRLRGQFMSQVSRGWSV*LSFQDN
Trigger: GTTATCCTGGAAACTGAGGCAGACACTCCAGCCCCT...AGAAACCTGGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp AGGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGAGGGGCTGGAGTGTCTaGCTCAGTTTCCAGGATAAC +
Preference number: 4 (lower is better)
Translates to: RPRGGRISPCHSCITLELRGWSV*LSFQDN
Trigger: GTTATCCTGGAAACTGAGGCAGACACTCCAGCCCCT...CAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp TTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGCGTGTGAAGGCCGTGTaGTTCAGGACGGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FIPLTVSVQRHQAVQSPVRVKAV*FRTVAV
Trigger: CACAGCCACCGTCCTGAAGCACACGGCCTTCACACG...CACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp TTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACGAACAGCCAGGCTTCTaGCCGGATTCTGGAACCTTT +
Preference number: 4 (lower is better)
Translates to: FCTATPGCAKPSVVFTEHEQPGF*PDSGTF
Trigger: AAAGGTTCCAGAATCCGGGCAGAAGCCTGGCTGTTC...GTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp GTATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGAGCCAGGCCAGGTGCTaGCTGCTGCTGGGAATAATC +
Preference number: 4 (lower is better)
Translates to: VCRGSSSVTPGGTPSFPLSQARC*LLLGII
Trigger: GATTATTCCCAGCAGCAGCCAGCACCTGGCCTGGCT...CAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp TTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGCCAGGCCAGGTGCTaGCTGCTGCTGGGAATAATC +
Preference number: 4 (lower is better)
Translates to: FCDTRRHTKFSSVPNTDQSQARC*LLLGII
Trigger: GATTATTCCCAGCAGCAGCCAGCACCTGGCCTGGCT...CTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp AGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGGATAACGGTGCAATaGCCTCAGCCAGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSVTPGGTPSFPLSLTQTRITVQ*PQPGQV
Trigger: CACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCT...GGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp TTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGATAACGGTGCAATaGCCTCAGCCAGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: FCDTRRHTKFSSVPNTDQRITVQ*PQPGQV
Trigger: CACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCT...CTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp TCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGATTAGAGGTCCCTGGGTaGCCCCTTGGTTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: SVTPGGTPSFPLSLTQTRLEVPG*PLGWPS
Trigger: TGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAA...TCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp GGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACATTAGAGGTCCCTGGGTaGCCCCTTGGTTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: GSSSVTPGGTPSFPLSLTLEVPG*PLGWPS
Trigger: TGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAA...TGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp GAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGACTGGCTTCTTTGTGGCTaGAGGTGTTCCAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: EAEGFLLATAASHLNCPDWLLCG*RCSRPG
Trigger: ACCAGGCCTGGAACACCTCCAGCCACAAAGAAGCCA...GTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp GAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGACCCTTTGGCTTCTTTGTaGCTGGAGGTGTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EAEGFLLATAASHLNCPDPLASL*LEVFQA
Trigger: GGCCTGGAACACCTCCAGCCACAAAGAAGCCAAAGG...GTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp TTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACAGAGGGACTGACCTTTaGCTTCTTTGTGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FCTATPGCAKPSVVFTEHRGTDL*LLCGWR
Trigger: CCTCCAGCCACAAAGAAGCCAAAGGTCAGTCCCTCT...GTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp AGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACAGGCAGCCTGGTCCAGGCTGGGATCTaGTTCACCTGGTCTGTACTT +
Preference number: 4 (lower is better)
Translates to: RLSCPSAGHVPILWTGSLVQAGI*FTWSVL
Trigger: AAGTACAGACCAGGTGAACCAGATCCCAGCCTGGAC...CAGGCTGCCTGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp CTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCACCCCCATTTCCAAGATaGGAAGACAGGCTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: LIDSTARSIPAGSRAIDSPPFPR*EDRLRD
Trigger: ATCTCTGAGCCTGTCTTCCCATCTTGGAAATGGGGG...TGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp CCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGGTTTCTCACATTCTCAGGGGCTaGTTCCCTAGGTCTGACTCA +
Preference number: 4 (lower is better)
Translates to: PSRKQGNRLRGQFMSQVSHILRG*FPRSDS
Trigger: TGAGTCAGACCTAGGGAACCAGCCCCTGAGAATGTG...AGAAACCTGGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR TCA 90 bp GGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACATATGTCCCAGGTTTCTaGGAAGGAGCCCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GSSSVTPGGTPSFPLSLTYVPGF*EGALGK
Trigger: CTTCCCCAGGGCTCCTTCTCAGAAACCTGGGACATA...TGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR TCA 90 bp CTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCCATACTGTTCTCTGCTaGGCCCTCTGCACACTTTGG +
Preference number: 4 (lower is better)
Translates to: LISKIQPTSDRLHSSQHPHTVLC*ALCTLW
Trigger: CCAAAGTGTGCAGAGGGCTCAGCAGAGAACAGTATG...GGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp AAGCCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTAACACTTTATTCCCTTaGCAGTTTCTGTACAGCGAC +
Preference number: 4 (lower is better)
Translates to: KPSVVFTEHIPQDAWCSPNTLFP*QFLYSD
Trigger: GTCGCTGTACAGAAACTGTCAAGGGAATAAAGTGTT...AGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp CCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTAACACTTTATTCCCTTaGCAGTTTCTGTACAGCGAC +
Preference number: 4 (lower is better)
Translates to: PQLAASQQEAGQSTQGPINTLFP*QFLYSD
Trigger: GTCGCTGTACAGAAACTGTCAAGGGAATAAAGTGTT...AATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp ATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCGTAGTTTCAGCTACTTaGGAGGCTGCGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: MQRIQFCDTRRHTKFSSVVVSAT*EAAVGG
Trigger: TCCTCCCACCGCAGCCTCTCAAGTAGCTGAAACTAC...GACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp GGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCCAGCACGCTCTCTTaGTTGATGATGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: GPEAEGFLLATAASHLNCPSTLS*LMMDLK
Trigger: CTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGG...ACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp AGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGCGACACCAGGCTGTaGAAAGCCCAGTGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: SSVTPGGTPSFPLSLTQTSDTRL*KAQCRL
Trigger: AAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCT...GGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp GGAGGATGTGTGGAGTTAGAGGTCCCTGGGTGGCCCCTTGGTTGGCCATCAGAGACAAAGTTACACTTTTaGTATGGATGGAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: GGCVELEVPGWPLGWPSETKLHF*YGWRQP
Trigger: GGGCTGTCTCCATCCATAGCAAAAGTGTAACTTTGT...CTCTGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACATCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp CCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTATCCTAGGGTACAGCTaGAATTATATTCAACCAGGC +
Preference number: 4 (lower is better)
Translates to: PQLAASQQEAGQSTQGPIILGYS*NYIQPG
Trigger: GCCTGGTTGAATATAATTGCAGCTGTACCCTAGGAT...AATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp CACTTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAAGCCAGGCCAGGTGCTaGCTGCTGCTGGGAATAATC +
Preference number: 4 (lower is better)
Translates to: HFIPLTVSVQRHQAVQSPSQARC*LLLGII
Trigger: GATTATTCCCAGCAGCAGCCAGCACCTGGCCTGGCT...TGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp TTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCAAGGAGCACAATGACGTaGCCAGGATCCCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LTVSVQRHQAVQSPVSSSRSTMT*PGSQKG
Trigger: CCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCT...TGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp GCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGACACTTTTGCTATGGATaGAGACAGCCCCTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AKFSPRLIDSTARSIPAGHFCYG*RQPLAQ
Trigger: CTGAGCTAGGGGCTGTCTCCATCCATAGCAAAAGTG...TCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp AGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCTGTCCCTTCCCAGGTTaGATACTCAGTGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: SSVTPGGTPSFPLSLTQTCPFPG*ILSATW
Trigger: CCAGGTGGCACTGAGTATCCAACCTGGGAAGGGACA...GGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp AGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCCCAATGCTTCAAGATTaGCCCGAAGCACCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SSVTPGGTPSFPLSLTQTPMLQD*PEAPSH
Trigger: GTGGGAGGGTGCTTCGGGCCAATCTTGAAGCATTGG...GGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp AGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCAAGATGTTTAACAACTTaGCCAAAGCTGTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SPRLIDSTARSIPAGSRARCLTT*PKLSSP
Trigger: TGGAGAGGACAGCTTTGGCCAAGTTGTTAAACATCT...TGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR TCA 90 bp ATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCTCGTGTAGAAACGTGTaGAGGCCGTGTGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: MQRIQFCDTRRHTKFSSVSCRNV*RPCASG
Trigger: TCCTGAAGCACACGGCCTTCACACGTTTCTACACGA...GACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR TCA 90 bp AAAACTACCCAGCTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCGATCACAGACACTGGTaGATGCCCAAGTCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: KTTQLISKIQPTSDRLHSDHRHW*MPKSSR
Trigger: CCGGCTGGACTTGGGCATTCACCAGTGTCTGTGATC...GCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAGCTGGGTAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp AAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCCCAGCACGCTCTCTTaGTTGATGATGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: KIQPTSDRLHSSQHPSRKPSTLS*LMMDLK
Trigger: CTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGG...CTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp GGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACAAGGGGCTGGAGTGTCTaGCTCAGTTTCCAGGATAAC +
Preference number: 4 (lower is better)
Translates to: GSSSVTPGGTPSFPLSLTRGWSV*LSFQDN
Trigger: GTTATCCTGGAAACTGAGGCAGACACTCCAGCCCCT...TGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp CTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCTGTTTACACTATGGCTaGACAGTGCACTGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LISKIQPTSDRLHSSQHPCLHYG*TVHCQW
Trigger: CCACTGGCAGTGCACTGTGCAGCCATAGTGTAAACA...GGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp TTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCAATCCCAGAAAGGGGCTaGAGTGTCTGCCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LTVSVQRHQAVQSPVSSSIPERG*SVCLSF
Trigger: GAAACTGAGGCAGACACTCCAGCCCCTTTCTGGGAT...TGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CACTTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCACCTTTGGCTTCTTTGTaGCTGGAGGTGTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HFIPLTVSVQRHQAVQSPPLASL*LEVFQA
Trigger: GGCCTGGAACACCTCCAGCCACAAAGAAGCCAAAGG...TGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CCA 90 bp CCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGGTTTCTGTTACACTTTTGCTATaGATGGAGACAGCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: PSRKQGNRLRGQFMSQVSVTLLL*METAPS
Trigger: GCTAGGGGCTGTCTCCATCCATAGCAAAAGTGTAAC...AGAAACCTGGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp TTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACCAGGACCTCAACAGCTaGAAGCCAATGCTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: FCTATPGCAKPSVVFTEHQDLNS*KPMLQD
Trigger: ATCTTGAAGCATTGGCTTCCAGCTGTTGAGGTCCTG...GTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR TCA 90 bp CCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCACCAAAACTACCCAGCTaGTCAGCAAAATTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PEAEGFLLATAASHLNCPPKLPS*SAKFSP
Trigger: TGGGCTGAATTTTGCTGATCAGCTGGGTAGTTTTGG...TGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR TCA 90 bp AAAACTACCCAGCTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCCAGCTGCATCACACTTaGACTGTCCAGACCTCCACC +
Preference number: 4 (lower is better)
Translates to: KTTQLISKIQPTSDRLHSQLHHT*TVQTST
Trigger: GGTGGAGGTCTGGACAGTTCAAGTGTGATGCAGCTG...GCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAGCTGGGTAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp TTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCATCTCCTTGCCACAGCTaGATCACACTTGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: LTVSVQRHQAVQSPVSSSSPCHS*ITLELS
Trigger: GGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGA...TGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp CCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGGAAGGATTTCTCCTTaGCACAGCTGCATCACACTT +
Preference number: 4 (lower is better)
Translates to: PEAEGFLLATAASHLNCPGRISP*HSCITL
Trigger: AAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCC...TGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp AAAACTACCCAGCTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCAGCGACACCAGGCTGTaGAAAGCCCAGTGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: KTTQLISKIQPTSDRLHSSDTRL*KAQCRL
Trigger: AAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCT...GCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAGCTGGGTAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR GCA 90 bp TTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGTTGGATACTCAGTaGCACCTGGGTAGTGTTGTG +
Preference number: 4 (lower is better)
Translates to: FCDTRRHTKFSSVPNTDQRLDTQ*HLGSVV
Trigger: CACAACACTACCCAGGTGGCACTGAGTATCCAACCT...CTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp GTATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGACAGCTGGAAGCCAATaGTTCAAGATTGGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: VCRGSSSVTPGGTPSFPLTAGSQ*FKIGPK
Trigger: CTTCGGGCCAATCTTGAAGCATTGGCTTCCAGCTGT...CAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp AAAACTACCCAGCTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCAGGAGCACAATGACGTaGCCAGGATCCCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: KTTQLISKIQPTSDRLHSRSTMT*PGSQKG
Trigger: CCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCT...GCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAGCTGGGTAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp GTATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGGGGATCTGGTTCACCTaGTCTGTACTTACTAGCGCT +
Preference number: 4 (lower is better)
Translates to: VCRGSSSVTPGGTPSFPLGIWFT*SVLTSA
Trigger: AGCGCTAGTAAGTACAGACCAGGTGAACCAGATCCC...CAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp AAAACTACCCAGCTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCGGAGAAGCTGGGGTATaGAGAGGATCCAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: KTTQLISKIQPTSDRLHSGEAGV*RGSSSV
Trigger: CACAGAACTGGATCCTCTGCATACCCCAGCTTCTCC...GCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAGCTGGGTAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR GCA 90 bp CCTGAAGCCGTACTAGCGCTCTCCAGGGTGAGGCTTACGCCCATCTACAACAAAACAAAGTTACACTTTTaGTATGGATGGAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: PEAVLALSRVRLTPIYNKTKLHF*YGWRQP
Trigger: GGGCTGTCTCCATCCATAGCAAAAGTGTAACTTTGT...TTTGTTGTAGATGGGCGTAAGCCTCACCCTGGAGAGCGCTAGTACGGCTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CCA 90 bp GCGCTCTCCAGGGTGAGGCTTACGCCCATCTACAACAAAGTTACACTTTTGCTACACTTTTGCTATGGATaGAGACAGCCCCTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: ALSRVRLTPIYNKVTLLLHFCYG*RQPLAQ
Trigger: CTGAGCTAGGGGCTGTCTCCATCCATAGCAAAAGTG...TAGCAAAAGTGTAACTTTGTTGTAGATGGGCGTAAGCCTCACCCTGGAGAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556868.1
CDS-3UTR CCA 90 bp GTATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGGTTACACTTTTGCTATaGATGGAGACAGCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: VCRGSSSVTPGGTPSFPLVTLLL*METAPS
Trigger: GCTAGGGGCTGTCTCCATCCATAGCAAAAGTGTAAC...CAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp CCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCACTTCTGCCCGGATTCTaGAACCTTTTCCAATTCTCT +
Preference number: 4 (lower is better)
Translates to: PEAEGFLLATAASHLNCPLLPGF*NLFQFS
Trigger: AGAGAATTGGAAAAGGTTCCAGAATCCGGGCAGAAG...TGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp CACTTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCATATGCCTTCTCAGGATaGGGTGCCAGTAGGCAAACA +
Preference number: 4 (lower is better)
Translates to: HFIPLTVSVQRHQAVQSPYAFSG*GASRQT
Trigger: TGTTTGCCTACTGGCACCCCATCCTGAGAAGGCATA...TGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp GAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGACATAGGTCAAGACAACTaGTCCCTGATTATTGCTGTG +
Preference number: 4 (lower is better)
Translates to: EAEGFLLATAASHLNCPDIGQDN*SLIIAV
Trigger: CACAGCAATAATCAGGGAGCAGTTGTCTTGACCTAT...GTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR GCA 90 bp AAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGACAAAGTTACACTTTTaGTATGGATGGAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: KIQPTSDRLHSSQHPSRKTKLHF*YGWRQP
Trigger: GGGCTGTCTCCATCCATAGCAAAAGTGTAACTTTGT...CTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CCA 90 bp AAAACTACCCAGCTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCAGGCTCTTAAAATCTTaGGGTGCCAGGCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KTTQLISKIQPTSDRLHSRLLKS*GARLSF
Trigger: AAAGGAGAGCCTGGCACCCCAAGATTTTAAGAGCCT...GCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAGCTGGGTAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CCA 90 bp TTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCAGAGTTAATAGAGTGGTaGCAAGAGAACAGCCAACAA +
Preference number: 4 (lower is better)
Translates to: LTVSVQRHQAVQSPVSSSELIEW*QENSQQ
Trigger: TTGTTGGCTGTTCTCTTGCCACCACTCTATTAACTC...TGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS CCA 90 bp CCGCTCCTCCTGGCGCGGAGCCCGGGCAGGCGCGGTCAGGGATGGTaGGGATGGCGGCAGCAGCTAGACCCGCGCTGGTCCCTCGGCGGC +
Preference number: 5 (lower is better)
Translates to: PLLLARSPGRRGQGW*GWRQQLDPRWSLGG
Trigger: GCCGCCGAGGGACCAGCGCGGGTCTAGCTGCTGCCGCCATCCCCACCATCCCTGACCGCGCCTGCCCGGGCTCCGCGCCAGGAGGAGCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000553359.5
ENST00000554060.1
ENST00000554224.5
ENST00000555949.2
ENST00000556715.6
ENST00000556868.1
ENST00000557438.1
CDS CCA 90 bp TGGCCGCTCCTCCTGGCGCGGAGCCCGGGCAGGCGCGGTCAGGGATaGTGGGGATGGCGGCAGCAGCTAGACCCGCGCTGGTCCCTCGGC +
Preference number: 5 (lower is better)
Translates to: WPLLLARSPGRRGQG*WGWRQQLDPRWSLG
Trigger: GCCGAGGGACCAGCGCGGGTCTAGCTGCTGCCGCCATCCCCACCATCCCTGACCGCGCCTGCCCGGGCTCCGCGCCAGGAGGAGCGGCCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000553359.5
ENST00000554060.1
ENST00000554224.5
ENST00000555949.2
ENST00000556715.6
ENST00000556868.1
ENST00000557438.1
CDS TCA 90 bp GGATGGCGGCAGCAGCTAGACCCGCGCTGGTCCCTCGGCGGCAGCTaGCTCGCTGGATCCCCTCCGGCCCGCGGTCCCTCACCTCGGGCC +
Preference number: 5 (lower is better)
Translates to: GWRQQLDPRWSLGGS*LAGSPPARGPSPRA
Trigger: GGCCCGAGGTGAGGGACCGCGGGCCGGAGGGGATCCAGCGAGTCAGCTGCCGCCGAGGGACCAGCGCGGGTCTAGCTGCTGCCGCCATCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553359.5
ENST00000554060.1
ENST00000554224.5
ENST00000555949.2
ENST00000556715.6
ENST00000556868.1
CDS CCA 90 bp GGGAAGTGCCGTGCCCGACGCCCACGGTCGGGGCATGGGAGAGCCTaGACTGCACGCCCGCCCGGGCCCTCCCGGGGACAACTGCATGGG +
Preference number: 5 (lower is better)
Translates to: GKCRARRPRSGHGRA*TARPPGPSRGQLHG
Trigger: CCCATGCAGTTGTCCCCGGGAGGGCCCGGGCGGGCGTGCAGTCCAGGCTCTCCCATGCCCCGACCGTGGGCGTCGGGCACGGCACTTCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556844.1
CDS CCA 90 bp AGGCCCAACAGGGAAGTGCCGTGCCCGACGCCCACGGTCGGGGCATaGGAGAGCCTGGACTGCACGCCCGCCCGGGCCCTCCCGGGGACA +
Preference number: 5 (lower is better)
Translates to: RPNREVPCPTPTVGA*ESLDCTPARALPGT
Trigger: TGTCCCCGGGAGGGCCCGGGCGGGCGTGCAGTCCAGGCTCTCCCATGCCCCGACCGTGGGCGTCGGGCACGGCACTTCCCTGTTGGGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556844.1
CDS GCA 90 bp GTGCCGTGCCCGACGCCCACGGTCGGGGCATGGGAGAGCCTGGACTaGACGCCCGCCCGGGCCCTCCCGGGGACAACTGCATGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: VPCPTPTVGAWESLD*TPARALPGTTAWEE
Trigger: TTCCTCCCATGCAGTTGTCCCCGGGAGGGCCCGGGCGGGCGTGCAGTCCAGGCTCTCCCATGCCCCGACCGTGGGCGTCGGGCACGGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556844.1
CDS CCA 90 bp CCCGCTGGATGGCCCCCGCGCATCCAGCCAAGAAGTCCAGCGCCATaGCCGGGTCCCCGGCGAGGCCGCCTTTCCTCCTCGTCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: PAGWPPRIQPRSPAP*PGPRRGRLSSSSSP
Trigger: GGGGGAGGACGAGGAGGAAAGGCGGCCTCGCCGGGGACCCGGCCATGGCGCTGGACTTCTTGGCTGGATGCGCGGGGGCCATCCAGCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553359.5
ENST00000556844.1
CDS CCA 90 bp AGCCTGGACTGCACGCCCGCCCGGGCCCTCCCGGGGACAACTGCATaGGAGGAACCCCAGAGCCGCGACCGCGCCTCGGAGAAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: SLDCTPARALPGTTA*EEPQSRDRASEKVP
Trigger: GGGCACCTTCTCCGAGGCGCGGTCGCGGCTCTGGGGTTCCTCCCATGCAGTTGTCCCCGGGAGGGCCCGGGCGGGCGTGCAGTCCAGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556844.1
CDS GCA 90 bp GGAGAGCCTGGACTGCACGCCCGCCCGGGCCCTCCCGGGGACAACTaGATGGGAGGAACCCCAGAGCCGCGACCGCGCCTCGGAGAAGGT +
Preference number: 5 (lower is better)
Translates to: GEPGLHARPGPPGDN*MGGTPEPRPRLGEG
Trigger: ACCTTCTCCGAGGCGCGGTCGCGGCTCTGGGGTTCCTCCCATGCAGTTGTCCCCGGGAGGGCCCGGGCGGGCGTGCAGTCCAGGCTCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556844.1
CDS-3UTR CAA 90 bp CAGGCGGTCGCCCGGCTCGCAGCCCAGCGCCCGCGTGAGAGCGTCATAGGTGAGTGGGTGGCCCCTTGGTaGGCCATCAGAGACCCCCGG +
Preference number: 5 (lower is better)
Translates to: QAVARLAAQRPRESVIGEWVAPW*AIRDPR
Trigger: CCGGGGGTCTCTGATGGCCAACCAAGGGGCCACCCA...CTCACCTATGACGCTCTCACGCGGGCGCTGGGCTGCGAGCCGGGCGACCGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392908.7
CDS-3UTR CAA 90 bp CCCGTAGATCTGCGCGAGGCAGTCCAGCGAGCCCTTGTAGGTGCGCGCTGGGCCAGGGCCCGGAGGGTGTaGCCCTGCACCCCGAACACC +
Preference number: 5 (lower is better)
Translates to: PVDLREAVQRALVGARWARARRV*PCTPNT
Trigger: GGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCT...GGCCCAGCGCGCACCTACAAGGGCTCGCTGGACTGCCTCGCGCAGATCTACGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS CCA 90 bp CGCGTAGGAAGGGGCGGCGTTCCAAGGCGTGACTCGGCGCCAGAGTaGTTCAGTGCCCTCCAAGGCCAGCCGAGTAGGGGGTCGGCTCCG +
Preference number: 5 (lower is better)
Translates to: RVGRGGVPRRDSAPE*FSALQGQPSRGSAP
Trigger: CGGAGCCGACCCCCTACTCGGCTGGCCTTGGAGGGCACTGAACCACTCTGGCGCCGAGTCACGCCTTGGAACGCCGCCCCTTCCTACGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553359.5
ENST00000556201.1
ENST00000556844.1
CDS-3UTR CAA 90 bp GGCGCCCGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGTGGCCCAGCCGAACACCAGCGCGTaGATGAAGGTGAGCCCCATG +
Preference number: 5 (lower is better)
Translates to: GARRRTCQELVEGRVVAQPNTSA*MKVSPM
Trigger: CATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGG...CTGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CAA 90 bp AGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCAGCACGCTCTCTTGCCCTGCCAGGAACTGGTaGAGGGGCGAGTCGTGGCCC +
Preference number: 5 (lower is better)
Translates to: SPMSGEPRPLYRPSTLSCPARNW*RGESWP
Trigger: GGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGG...GCAAGAGAGCGTGCTGGGCCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS GCA 90 bp GCAGGCAGGACCAGAGCACCCAGCTCCCGGGTCTGGTGCTTAGGCTaGCTAGGAGGGTCTCCCAAGGAGGCCGGGCACTCAGGCACAGTC +
Preference number: 5 (lower is better)
Translates to: AGRTRAPSSRVWCLG*LGGSPKEAGHSGTV
Trigger: GACTGTGCCTGAGTGCCCGGCCTCCTTGGGAGACCCTCCTAGGCAGCCTAAGCACCAGACCCGGGAGCTGGGTGCTCTGGTCCTGCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CAA 90 bp GCCAGCCTGCAGGGCAGGAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTAGGGCCCGGAGGGTGTaGCCCTGCACCCCGAACACC +
Preference number: 5 (lower is better)
Translates to: ASLQGRSTMTWPGSQKGARARRV*PCTPNT
Trigger: GGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCT...AGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCTGCAGGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp GCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCCCTGCCAGGAACTGGTaGAGGGGCGAGTCGTGGCCC +
Preference number: 5 (lower is better)
Translates to: ALMKVSPMSGEPRPLYRPPARNW*RGESWP
Trigger: GGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGG...GGGCCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CAA 90 bp GATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTACAGGCCCAGCACCCTGCCAGGAACTGGTaGAGGGGCGAGTCGTGGCCC +
Preference number: 5 (lower is better)
Translates to: DEGEPHERRAQALVQAQHPARNW*RGESWP
Trigger: GGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGG...GTGCTGGGCCTGTACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CAA 90 bp TTTGGGGGATCCTGGCTGGCGGTGGTAGGTGGGCCGGAGACTCAGTTGTCCGTCGCGAAGGTGGCAGCGTaGACGGGGAAGGCGCGCAGC +
Preference number: 5 (lower is better)
Translates to: FGGSWLAVVGGPETQLSVAKVAA*TGKARS
Trigger: GCTGCGCGCCTTCCCCGTCAACGCTGCCACCTTCGC...GACGGACAACTGAGTCTCCGGCCCACCTACCACCGCCAGCCAGGATCCCCCAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp CCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACCCTCCCACCGCTGGCCTGTTaGCTCCCCACCCTAGTCCCG +
Preference number: 5 (lower is better)
Translates to: PPADSMASRRVQGPQFTLPPLAC*LPTLVP
Trigger: CGGGACTAGGGTGGGGAGCAAACAGGCCAGCGGTGG...GAGGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS TCA 90 bp GCCTGCCACACAAAACCGCGTAGGAAGGGGCGGCGTTCCAAGGCGTaGCTCGGCGCCAGAGTGGTTCAGTGCCCTCCAAGGCCAGCCGAG +
Preference number: 5 (lower is better)
Translates to: ACHTKPRRKGRRSKA*LGARVVQCPPRPAE
Trigger: CTCGGCTGGCCTTGGAGGGCACTGAACCACTCTGGCGCCGAGTCACGCCTTGGAACGCCGCCCCTTCCTACGCGGTTTTGTGTGGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553359.5
CDS-3UTR CAA 90 bp CGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGTGGCCCAGGGCCCGGCCCAGCACGCTCTCTaGCTTGATGATGGACTTGAA +
Preference number: 5 (lower is better)
Translates to: RRRTCQELVEGRVVAQGPAQHAL*LDDGLE
Trigger: TTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGGC...CGGGCCCTGGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CAA 90 bp TTGCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGACACCATGCCCCGGTaGACGCCACGCAGACCCTCG +
Preference number: 5 (lower is better)
Translates to: LPCTPNTSALMKVSPMSGDTMPR*TPRRPS
Trigger: CGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGTC...GCCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CAA 90 bp CACTGGATGGCGCCCGCCGCCGCACCTGCCAGGAACTGGTTGAGGGGCGAGTCGGATGGAGACAGCCCCTaGACCGTGTCAAACGGGTGT +
Preference number: 5 (lower is better)
Translates to: HWMAPAAAPARNWLRGESDGDSP*TVSNGC
Trigger: ACACCCGTTTGACACGGTCAAGGGGCTGTCTCCATC...CGACTCGCCCCTCAACCAGTTCCTGGCAGGTGCGGCGGCGGGCGCCATCCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CAA 90 bp CCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCCTCCTGCCAGGAACTGGTaGAGGGGCGAGTCGTGGCCC +
Preference number: 5 (lower is better)
Translates to: PSVVFTEHIPQDAWCSPPPARNW*RGESWP
Trigger: GGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGG...AGGAGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp CAGTCCGTCCGCCTGCAGCCGCGACTTGACCACGTCCACAGGATAGGTAGAGAGGACACCATGCCCCGGTaGACGCCACGCAGACCCTCG +
Preference number: 5 (lower is better)
Translates to: QSVRLQPRLDHVHRIGREDTMPR*TPRRPS
Trigger: CGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGTC...CTCTCTACCTATCCTGTGGACGTGGTCAAGTCGCGGCTGCAGGCGGACGGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392908.7
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CAA 90 bp TGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCATCCCTGGGTGGCCCCTaGGTTGGCCATCAGAGACCC +
Preference number: 5 (lower is better)
Translates to: WCLQQTPWLPGGCRVPSSSLGGP*VGHQRP
Trigger: GGGTCTCTGATGGCCAACCAAGGGGCCACCCAGGGA...TGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp GAAGGCGCGCAGCAGCGTGGACGCCAGCCCCCGTGTGAAGACGCGCCAGCCCTCACAGCTGCATCACACTaGAACTGTCCAGACCTCCAC +
Preference number: 5 (lower is better)
Translates to: EGAQQRGRQPPCEDAPALTAASH*NCPDLH
Trigger: GTGGAGGTCTGGACAGTTCAAGTGTGATGCAGCTGT...GAGGGCTGGCGCGTCTTCACACGGGGGCTGGCGTCCACGCTGCTGCGCGCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392908.7
CDS-3UTR CAA 90 bp CCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACCCTCATAGGAGGCTCAGAGTaGCAGAGCGGGCGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: PPADSMASRRVQGPQFTLIGGSE*QSGRWE
Trigger: CTCCCACCGCCCGCTCTGCAACTCTGAGCCTCCTAT...GAGGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS TCA 90 bp CAACAGCTCACAAAACCGCGTAGGAAGGGGCGGCGTTCCAAGGCGTaGCTCGGCGCCAGAGTGGTTCAGTGCCCTCCAAGGCCAGCCGAG +
Preference number: 5 (lower is better)
Translates to: QQLTKPRRKGRRSKA*LGARVVQCPPRPAE
Trigger: CTCGGCTGGCCTTGGAGGGCACTGAACCACTCTGGCGCCGAGTCACGCCTTGGAACGCCGCCCCTTCCTACGCGGTTTTGTGAGCTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556844.1
CDS-3UTR CAA 90 bp AGGGCCCGGAGGGTGTTGCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGCCGAACACCAGCGCGTaGATGAAGGTGAGCCCCATG +
Preference number: 5 (lower is better)
Translates to: RARRVLPCTPNTSALMKVPNTSA*MKVSPM
Trigger: CATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGG...CACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CAA 90 bp CCCAGCACGCTCTCTTGCTTGATGATGGACTTGAAGCAGTGCAACGTCCCGCGGAGGGCCCGGAGGGTGTaGCCCTGCACCCCGAACACC +
Preference number: 5 (lower is better)
Translates to: PSTLSCLMMDLKQCNVPRRARRV*PCTPNT
Trigger: GGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCT...CCGCGGGACGTTGCACTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CAA 90 bp CGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCGCGAAGGTGGCAGCGTaGACGGGGAAGGCGCGCAGC +
Preference number: 5 (lower is better)
Translates to: RSIPAGSRAIDSGANLCPAKVAA*TGKARS
Trigger: GCTGCGCGCCTTCCCCGTCAACGCTGCCACCTTCGC...GGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp GCCTCAGTTTCCAGGATAACGGTGCAATGGCCTCAGCCAGGCCAGGTGCTGGCTCCACCGCTGGCCTGTTaGCTCCCCACCCTAGTCCCG +
Preference number: 5 (lower is better)
Translates to: ASVSRITVQWPQPGQVLAPPLAC*LPTLVP
Trigger: CGGGACTAGGGTGGGGAGCAAACAGGCCAGCGGTGG...AGCCAGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp CAGCCTGCAGGGCAGGAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTGGGGGCCGGAGACTCAGTaGTCCGTCAGCTGGCCATGT +
Preference number: 5 (lower is better)
Translates to: QPAGQEHNDVARIPERGWGPETQ*SVSWPC
Trigger: ACATGGCCAGCTGACGGACAACTGAGTCTCCGGCCC...CCAGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCTGCAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS GCA 90 bp AACCCTCAAGGTAAAAGCAGAGAAGCCAGAGGCCCAACAGGGAAGTaGCGTGCCCGACGCCCACGGTCGGGGCATGGGAGAGCCTGGACT +
Preference number: 5 (lower is better)
Translates to: NPQGKSREARGPTGK*RARRPRSGHGRAWT
Trigger: AGTCCAGGCTCTCCCATGCCCCGACCGTGGGCGTCGGGCACGGCACTTCCCTGTTGGGCCTCTGGCTTCTCTGCTTTTACCTTGAGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556844.1
CDS-3UTR CAA 90 bp CAGCCTGCAGGGCAGGAGCACAATGACGTGGCCAGGATCCCAGAAAGGGGCTGGCCGAACACCAGCGCGTaGATGAAGGTGAGCCCCATG +
Preference number: 5 (lower is better)
Translates to: QPAGQEHNDVARIPERGWPNTSA*MKVSPM
Trigger: CATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGG...CCAGCCCCTTTCTGGGATCCTGGCCACGTCATTGTGCTCCTGCCCTGCAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp CACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGGTGGCCCACCACCCGACACCATGCCCCGGTaGACGCCACGCAGACCCTCG +
Preference number: 5 (lower is better)
Translates to: HTKFSSVPNTDQRGGPPPDTMPR*TPRRPS
Trigger: CGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGTC...GGGTGGTGGGCCACCCCTCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp GCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGGTGCGAAGGTGGCAGCGTaGACGGGGAAGGCGCGCAGC +
Preference number: 5 (lower is better)
Translates to: ASQQEAGQSTQGPIYVPGAKVAA*TGKARS
Trigger: GCTGCGCGCCTTCCCCGTCAACGCTGCCACCTTCGC...ACCTGGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp CCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACCCTCCTGGAGGCCCAGTTCTaGGCCAACACCTTGATGCGA +
Preference number: 5 (lower is better)
Translates to: PPADSMASRRVQGPQFTLLEAQF*ANTLMR
Trigger: TCGCATCAAGGTGTTGGCCAAGAACTGGGCCTCCAG...GAGGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CAA 90 bp CAGCAACGTGGACACCATGCCCCGGTTGACGCCACGCAGACCCTCGTGCCCGTAGATGGAGACAGCCCCTaGACCGTGTCAAACGGGTGT +
Preference number: 5 (lower is better)
Translates to: QQRGHHAPVDATQTLVPVDGDSP*TVSNGC
Trigger: ACACCCGTTTGACACGGTCAAGGGGCTGTCTCCATC...TACGGGCACGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGTCCACGTTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CAA 90 bp CGTAGATCTGCGCGAGGCAGTCCAGCGAGCCCTTGTAGGTGCGCGCTGGGCCCGAGCACGCTCTCTTGCTaGATGATGGACTTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: RRSARGSPASPCRCALGPSTLSC*MMDLKQ
Trigger: CTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCT...CGGGCCCAGCGCGCACCTACAAGGGCTCGCTGGACTGCCTCGCGCAGATCTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CAA 90 bp GTGGCCCAGGGCCCGGAGGGTGTTGCCCTGCACCCCGAACACCAGCGCGTTGATAGCACGCTCTCTTGCTaGATGATGGACTTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: VAQGPEGVALHPEHQRVDSTLSC*MMDLKQ
Trigger: CTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCT...ATCAACGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCTGGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CAA 90 bp CCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCCTCCGAACACCAGCGCGTaGATGAAGGTGAGCCCCATG +
Preference number: 5 (lower is better)
Translates to: PSVVFTEHIPQDAWCSPPPNTSA*MKVSPM
Trigger: CATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGG...AGGAGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp AGGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGAGGGCCCGGAGGGTGTaGCCCTGCACCCCGAACACC +
Preference number: 5 (lower is better)
Translates to: RPRGGRISPCHSCITLELRARRV*PCTPNT
Trigger: GGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCT...CAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp CTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGACACCATGCCCCGGTaGACGCCACGCAGACCCTCG +
Preference number: 5 (lower is better)
Translates to: LIDSTARSIPAGSRAIDSDTMPR*TPRRPS
Trigger: CGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGTC...TGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp GGTACCCCTAGCAGTGGCATGTGGAGAAGCTGGGGTATGCAGAGGATCCAGTTCTGGGTGGCCCCTTGGTaGGCCATCAGAGACCCCCGG +
Preference number: 5 (lower is better)
Translates to: GTPSSGMWRSWGMQRIQFWVAPW*AIRDPR
Trigger: CCGGGGGTCTCTGATGGCCAACCAAGGGGCCACCCA...GAACTGGATCCTCTGCATACCCCAGCTTCTCCACATGCCACTGCTAGGGGTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp GTGGGCCGGAGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACACCACCGCTGGCCTGTTaGCTCCCCACCCTAGTCCCG +
Preference number: 5 (lower is better)
Translates to: VGRRLSCPSAGHVPILWTPPLAC*LPTLVP
Trigger: CGGGACTAGGGTGGGGAGCAAACAGGCCAGCGGTGG...TGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCTCCGGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp GGAGGATGTGTGGAGTTAGAGGTCCCTGGGTGGCCCCTTGGTTGGCCATCAGAGGGGCCGGAGACTCAGTaGTCCGTCAGCTGGCCATGT +
Preference number: 5 (lower is better)
Translates to: GGCVELEVPGWPLGWPSEGPETQ*SVSWPC
Trigger: ACATGGCCAGCTGACGGACAACTGAGTCTCCGGCCC...CTCTGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACATCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp TTTGGGGGATCCTGGCTGGCGGTGGTAGGTGGGCCGGAGACTCAGTTGTCCGTCCTGTCCCTTCCCAGGTaGGATACTCAGTGCCACCTG +
Preference number: 5 (lower is better)
Translates to: FGGSWLAVVGGPETQLSVLSLPR*DTQCHL
Trigger: CAGGTGGCACTGAGTATCCAACCTGGGAAGGGACAG...GACGGACAACTGAGTCTCCGGCCCACCTACCACCGCCAGCCAGGATCCCCCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS TCA 90 bp AGCAAGGGTGGAGCAAACAGCGAGATCAGAAGCGGGAGGGGAAGGTaGGAATGGAATCCGCAGAGGACACGCCCCCTCTGTCTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: SKGGANSEIRSGRGR*EWNPQRTRPLCLQG
Trigger: GCCCTGGAGACAGAGGGGGCGTGTCCTCTGCGGATTCCATTCTCACCTTCCCCTCCCGCTTCTGATCTCGCTGTTTGCTCCACCCTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556201.1
ENST00000556844.1
CDS CCA 90 bp CGCCTGCCACACCTGTGGGTGCAGCAGGCAGATCCCATGAGCCCCTaGAATCCTCACGTCCACTGGGAGGGTATGCATGTGACATCCCAA +
Preference number: 5 (lower is better)
Translates to: RLPHLWVQQADPMSP*NPHVHWEGMHVTSQ
Trigger: TTGGGATGTCACATGCATACCCTCCCAGTGGACGTGAGGATTCCAGGGGCTCATGGGATCTGCCTGCTGCACCCACAGGTGTGGCAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555051.5
ENST00000555888.1
CDS-3UTR CAA 90 bp GGGAGGCACCGTTTGCTGGGGAGCAGAGGGACTGACCTTTGGCTTCTTTGTGGCCCGAACACCAGCGCGTaGATGAAGGTGAGCCCCATG +
Preference number: 5 (lower is better)
Translates to: GRHRLLGSRGTDLWLLCGPNTSA*MKVSPM
Trigger: CATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGG...GCCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp GTGGGCCGGAGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACAAGCCCTCTGCACACTTaGGGGGATCCTGGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: VGRRLSCPSAGHVPILWTSPLHT*GDPGWR
Trigger: CCGCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGCT...TGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCTCCGGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS TCA 90 bp CGAAGCACCCTCCCACCCTGGAGGCCCAGTTCTTGGCCAACACCTTaGTGCGAGGTTTGCTGCTCTCCCTTCAATGTTCTGGGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: RSTLPPWRPSSWPTP*CEVCCSPFNVLGPL
Trigger: CAGAGGCCCCAGAACATTGAAGGGAGAGCAGCAAACCTCGCATCAAGGTGTTGGCCAAGAACTGGGCCTCCAGGGTGGGAGGGTGCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CAA 90 bp ATGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCTGCTTGATGATGGACTaGAAGCAGTGCAACGTCCCG +
Preference number: 5 (lower is better)
Translates to: MVPPADSMASRRVQGPQFCLMMD*KQCNVP
Trigger: CGGGACGTTGCACTGCTTCAAGTCCATCATCAAGCA...GAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp CCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACCCTCAGCACGCTCTCTTGCTaGATGATGGACTTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: PPADSMASRRVQGPQFTLSTLSC*MMDLKQ
Trigger: CTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCT...GAGGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp CAGCAACGTGGACACCATGCCCCGGTTGACGCCACGCAGACCCTCGTGCCCGTAAGCACGCTCTCTTGCTaGATGATGGACTTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: QQRGHHAPVDATQTLVPVSTLSC*MMDLKQ
Trigger: CTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCT...TACGGGCACGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGTCCACGTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CAA 90 bp CACCAGCGCGTTGATGAAGGTGAGCCCCATGAGCGGCGAGCCCAGGCCCTTGTAGCCCAGCACGCTCTCTaGCTTGATGATGGACTTGAA +
Preference number: 5 (lower is better)
Translates to: HQRVDEGEPHERRAQALVAQHAL*LDDGLE
Trigger: TTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGGC...TACAAGGGCCTGGGCTCGCCGCTCATGGGGCTCACCTTCATCAACGCGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CAA 90 bp TTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAGGGCCCGGAGGGTGTaGCCCTGCACCCCGAACACC +
Preference number: 5 (lower is better)
Translates to: FCDTRRHTKFSSVPNTDQRARRV*PCTPNT
Trigger: GGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCT...CTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp TCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAAGGGCCCGGAGGGTGTaGCCCTGCACCCCGAACACC +
Preference number: 5 (lower is better)
Translates to: SVTPGGTPSFPLSLTQTRRARRV*PCTPNT
Trigger: GGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCT...TCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp CTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCCCTGCCAGGAACTGGTaGAGGGGCGAGTCGTGGCCC +
Preference number: 5 (lower is better)
Translates to: LISKIQPTSDRLHSSQHPPARNW*RGESWP
Trigger: GGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGG...GGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp CAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTTGGGTGGCCCCTTGGTaGGCCATCAGAGACCCCCGG +
Preference number: 5 (lower is better)
Translates to: QRIQFCDTRRHTKFSSVPWVAPW*AIRDPR
Trigger: CCGGGGGTCTCTGATGGCCAACCAAGGGGCCACCCA...AGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp CAACTAGCCACCCCTGTGCCCACTAGCAGGCCCTGTGCCTTCACAGGGATGAAGGTCTGTGACGAGCCCTaGCTCTCTGGGAGAGGAACT +
Preference number: 5 (lower is better)
Translates to: QLATPVPTSRPCAFTGMKVCDEP*LSGRGT
Trigger: AGTTCCTCTCCCAGAGAGCAAGGGCTCGTCACAGAC...CTTCATCCCTGTGAAGGCACAGGGCCTGCTAGTGGGCACAGGGGTGGCTAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS GCA 90 bp AAGTACCATCTCAGTACCCCCAGGACCTCAACAGCTGGAAGCCAATaGTTCAAGATTGGCCCGAAGCACCCTCCCACCCTGGAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: KYHLSTPRTSTAGSQ*FKIGPKHPPTLEAQ
Trigger: CTGGGCCTCCAGGGTGGGAGGGTGCTTCGGGCCAATCTTGAAGCATTGGCTTCCAGCTGTTGAGGTCCTGGGGGTACTGAGATGGTACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS CCA 90 bp TATGAGTTAATAGAGTGGTGGCAAGAGAACAGCCAACAACCTCCTTaGGGACCCACGTCAGCAGCTCTGGGGCCTGGGGCGCTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: YELIEWWQENSQQPP*GPTSAALGPGALVR
Trigger: CCTGACCAGCGCCCCAGGCCCCAGAGCTGCTGACGTGGGTCCCCAAGGAGGTTGTTGGCTGTTCTCTTGCCACCACTCTATTAACTCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000555475.1
CDS-3UTR CAA 90 bp CAGGCCCTGTGCCTTCACAGGGATGAAGCCCTGGCACTGAGAATGCCTGGGAGGGCCCAGCACGCTCTCTaGCTTGATGATGGACTTGAA +
Preference number: 5 (lower is better)
Translates to: QALCLHRDEALALRMPGRAQHAL*LDDGLE
Trigger: TTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGGC...CCTCCCAGGCATTCTCAGTGCCAGGGCTTCATCCCTGTGAAGGCACAGGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp ATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTGCCAGGAACTGGTaGAGGGGCGAGTCGTGGCCC +
Preference number: 5 (lower is better)
Translates to: MQRIQFCDTRRHTKFSSVPARNW*RGESWP
Trigger: GGGCCACGACTCGCCCCTCAACCAGTTCCTGGCAGG...GACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp ATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCGACACCATGCCCCGGTaGACGCCACGCAGACCCTCG +
Preference number: 5 (lower is better)
Translates to: MQRIQFCDTRRHTKFSSVDTMPR*TPRRPS
Trigger: CGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGTC...GACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp TTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGGCGAAGGTGGCAGCGTaGACGGGGAAGGCGCGCAGC +
Preference number: 5 (lower is better)
Translates to: FIPLTVSVQRHQAVQSPVAKVAA*TGKARS
Trigger: GCTGCGCGCCTTCCCCGTCAACGCTGCCACCTTCGC...CACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp CCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCATCCCTGGGTGGCCCCTaGGTTGGCCATCAGAGACCC +
Preference number: 5 (lower is better)
Translates to: PEAEGFLLATAASHLNCPSLGGP*VGHQRP
Trigger: GGGTCTCTGATGGCCAACCAAGGGGCCACCCAGGGA...TGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp CTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCTCCCTGGGTGGCCCCTaGGTTGGCCATCAGAGACCC +
Preference number: 5 (lower is better)
Translates to: LISKIQPTSDRLHSSQHPSLGGP*VGHQRP
Trigger: GGGTCTCTGATGGCCAACCAAGGGGCCACCCAGGGA...GGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp CCCAGTGTCGTCTTCACTGAGCACATTCCCCAGGACGCCTGGTGCAGCCCTCCTCGGAAGGATTTCTCCTaGCCACAGCTGCATCACACT +
Preference number: 5 (lower is better)
Translates to: PSVVFTEHIPQDAWCSPPRKDFS*PQLHHT
Trigger: AGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCG...AGGAGGGCTGCACCAGGCGTCCTGGGGAATGTGCTCAGTGAAGACGACACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp GCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAGGGCCGGAGACTCAGTaGTCCGTCAGCTGGCCATGT +
Preference number: 5 (lower is better)
Translates to: AKFSPRLIDSTARSIPAGGPETQ*SVSWPC
Trigger: ACATGGCCAGCTGACGGACAACTGAGTCTCCGGCCC...TCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp AGGGCCCGGAGGGTGTTGCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGGAGGAGATCCAGATCTaGGATTCTTTCAGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: RARRVLPCTPNTSALMKVEEIQI*DSFSPK
Trigger: CTTGGGACTGAAAGAATCCAAGATCTGGATCTCCTC...CACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556868.1
CDS-3UTR CAA 90 bp TTCTCTGCTGAGCCCTCTGCACACTTTGGGGGATCCTGGCTGGCGGTGGTAGGTGTGCCAGGCTCTCCTTaGAGGATTGATGGGAACGGA +
Preference number: 5 (lower is better)
Translates to: FSAEPSAHFGGSWLAVVGVPGSP*RIDGNG
Trigger: TCCGTTCCCATCAATCCTCAAAGGAGAGCCTGGCAC...ACCTACCACCGCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGCTCAGCAGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS CCA 90 bp GTAATTCCAGGGCAGGGTGGGCCGGGTATCTATGCCTTCTCAGGATaGGGTGCCAGTAGGCAAACAGCTAAAGGGACAGGCTGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: VIPGQGGPGIYAFSG*GASRQTAKGTGCWR
Trigger: TCTCCAGCAGCCTGTCCCTTTAGCTGTTTGCCTACTGGCACCCCATCCTGAGAAGGCATAGATACCCGGCCCACCCTGCCCTGGAATTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS CCA 90 bp GCGATTAGCAGCAAATTCTGGGCTTTGTGCCCCGCAGCTTCCCACTaGGTAACCGACCGGGAAGTTCTAACTCCCCTCAGCGCACAACAC +
Preference number: 5 (lower is better)
Translates to: AISSKFWALCPAASH*VTDREVLTPLSAQH
Trigger: GTGTTGTGCGCTGAGGGGAGTTAGAACTTCCCGGTCGGTTACCCAGTGGGAAGCTGCGGGGCACAAAGCCCAGAATTTGCTGCTAATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556201.1
ENST00000556844.1
CDS-3UTR CAA 90 bp GGGAGGCACCGTTTGCTGGGGAGCAGAGGGACTGACCTTTGGCTTCTTTGTGGCGCCCAGCACGCTCTCTaGCTTGATGATGGACTTGAA +
Preference number: 5 (lower is better)
Translates to: GRHRLLGSRGTDLWLLCGAQHAL*LDDGLE
Trigger: TTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGGC...GCCACAAAGAAGCCAAAGGTCAGTCCCTCTGCTCCCCAGCAAACGGTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp TCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGATCCCTGGGTGGCCCCTaGGTTGGCCATCAGAGACCC +
Preference number: 5 (lower is better)
Translates to: SVTPGGTPSFPLSLTQTRSLGGP*VGHQRP
Trigger: GGGTCTCTGATGGCCAACCAAGGGGCCACCCAGGGA...TCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp AGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCAGCAGGAAGCAGGGCACGGAAGGATTTCTCCTaGCCACAGCTGCATCACACT +
Preference number: 5 (lower is better)
Translates to: SPRLIDSTARSIPAGSRARKDFS*PQLHHT
Trigger: AGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCG...TGCCCTGCTTCCTGCTGGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp ATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCAGCCCTCTGCACACTTaGGGGGATCCTGGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: MQRIQFCDTRRHTKFSSVSPLHT*GDPGWR
Trigger: CCGCCAGCCAGGATCCCCCAAAGTGTGCAGAGGGCT...GACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp CGGCTCGCAGCCCAGCGCCCGCGTGAGAGCGTCATAGGTGAGGAAGTAGACGCCAACAAAGTTACACTTTaGCTATGGATGGAGACAGCC +
Preference number: 5 (lower is better)
Translates to: RLAAQRPRESVIGEEVDANKVTL*LWMETA
Trigger: GGCTGTCTCCATCCATAGCAAAAGTGTAACTTTGTT...GGCGTCTACTTCCTCACCTATGACGCTCTCACGCGGGCGCTGGGCTGCGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554224.5
ENST00000556715.6
CDS-3UTR CAA 90 bp CAACTAGCCACCCCTGTGCCCACTAGCAGGCCCTGTGCCTTCACAGGGATGAAGCAGGCTCTTAAAATCTaGGGGTGCCAGGCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: QLATPVPTSRPCAFTGMKQALKI*GCQALL
Trigger: AAGGAGAGCCTGGCACCCCAAGATTTTAAGAGCCTG...CTTCATCCCTGTGAAGGCACAGGGCCTGCTAGTGGGCACAGGGGTGGCTAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CAA 90 bp GAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGACCAGCCAACAACCTCCTaGGGGACCCACGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: EAEGFLLATAASHLNCPDQPTTS*GTHVSS
Trigger: GCTGCTGACGTGGGTCCCCAAGGAGGTTGTTGGCTG...GTCTGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS GCA 90 bp GGAGTGCTAGCAAGGGAGAGCCCTCACCGGGAACAGCCAGGCTTCTaGCCGGATTCTGGAACCTTTTCCAATTCTCTCCACCAGAATAGG +
Preference number: 5 (lower is better)
Translates to: GVLARESPHREQPGF*PDSGTFSNSLHQNR
Trigger: CCTATTCTGGTGGAGAGAATTGGAAAAGGTTCCAGAATCCGGGCAGAAGCCTGGCTGTTCCCGGTGAGGGCTCTCCCTTGCTAGCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CAA 90 bp GCCTCAGTTTCCAGGATAACGGTGCAATGGCCTCAGCCAGGCCAGGTGCTGGCTAGCACGCTCTCTTGCTaGATGATGGACTTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: ASVSRITVQWPQPGQVLASTLSC*MMDLKQ
Trigger: CTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCT...AGCCAGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp GGAGGATGTGTGGAGTTAGAGGTCCCTGGGTGGCCCCTTGGTTGGCCATCAGAGAGCACGCTCTCTTGCTaGATGATGGACTTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: GGCVELEVPGWPLGWPSESTLSC*MMDLKQ
Trigger: CTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCT...CTCTGATGGCCAACCAAGGGGCCACCCAGGGACCTCTAACTCCACACATCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp AAAACTACCCAGCTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCGACACCATGCCCCGGTaGACGCCACGCAGACCCTCG +
Preference number: 5 (lower is better)
Translates to: KTTQLISKIQPTSDRLHSDTMPR*TPRRPS
Trigger: CGAGGGTCTGCGTGGCGTCAACCGGGGCATGGTGTC...GCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAGCTGGGTAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp GTCTGCCTCAGTTTCCAGGATAACGGTGCAATGGCCTCAGCCAGGCCAGGTGCTACAGCTGCATCACACTaGAACTGTCCAGACCTCCAC +
Preference number: 5 (lower is better)
Translates to: VCLSFQDNGAMASARPGATAASH*NCPDLH
Trigger: GTGGAGGTCTGGACAGTTCAAGTGTGATGCAGCTGT...AGCACCTGGCCTGGCTGAGGCCATTGCACCGTTATCCTGGAAACTGAGGCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp AGGGCCCGGAGGGTGTTGCCCTGCACCCCGAACACCAGCGCGTTGATGAAGGTGAACAAAGTTACACTTTaGCTATGGATGGAGACAGCC +
Preference number: 5 (lower is better)
Translates to: RARRVLPCTPNTSALMKVNKVTL*LWMETA
Trigger: GGCTGTCTCCATCCATAGCAAAAGTGTAACTTTGTT...CACCTTCATCAACGCGCTGGTGTTCGGGGTGCAGGGCAACACCCTCCGGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CAA 90 bp CCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGGTTTCTGCCAATGCTTCAAGATaGGCCCGAAGCACCCTCCCA +
Preference number: 5 (lower is better)
Translates to: PSRKQGNRLRGQFMSQVSANASR*ARSTLP
Trigger: TGGGAGGGTGCTTCGGGCCAATCTTGAAGCATTGGC...AGAAACCTGGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS TCA 90 bp TGTCCAAGGAAGCAGGACAGAAAACTCCCTTCGTGTAGAAACGTGTaGAGGCCGTGTGCTTCAGGACGGTGGCTGTGGTTCTGGGCGCTA +
Preference number: 5 (lower is better)
Translates to: CPRKQDRKLPSCRNV*RPCASGRWLWFWAL
Trigger: TAGCGCCCAGAACCACAGCCACCGTCCTGAAGCACACGGCCTTCACACGTTTCTACACGAAGGGAGTTTTCTGTCCTGCTTCCTTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553359.5
ENST00000554912.1
ENST00000556868.1
ENST00000556873.5
CDS-3UTR CAA 90 bp TTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACCGAACACCAGCGCGTaGATGAAGGTGAGCCCCATG +
Preference number: 5 (lower is better)
Translates to: LTVSVQRHQAVQSPVSSSPNTSA*MKVSPM
Trigger: CATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGG...TGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp GTGGGCCGGAGACTCAGTTGTCCGTCAGCTGGCCATGTCCCCATTTTATGGACACGGAAGGATTTCTCCTaGCCACAGCTGCATCACACT +
Preference number: 5 (lower is better)
Translates to: VGRRLSCPSAGHVPILWTRKDFS*PQLHHT
Trigger: AGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCG...TGTCCATAAAATGGGGACATGGCCAGCTGACGGACAACTGAGTCTCCGGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp TTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCAAAGGGACCCGTGGTGTaGGAAGTGAGGACAGTGGGC +
Preference number: 5 (lower is better)
Translates to: LTVSVQRHQAVQSPVSSSKGPVV*EVRTVG
Trigger: GCCCACTGTCCTCACTTCCAACACCACGGGTCCCTT...TGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS CCA 90 bp GTTAGGAAACAAGTACCATCTCAGTACCCCCAGGACCTCAACAGCTaGAAGCCAATGCTTCAAGATTGGCCCGAAGCACCCTCCCACCCT +
Preference number: 5 (lower is better)
Translates to: VRKQVPSQYPQDLNS*KPMLQDWPEAPSHP
Trigger: AGGGTGGGAGGGTGCTTCGGGCCAATCTTGAAGCATTGGCTTCCAGCTGTTGAGGTCCTGGGGGTACTGAGATGGTACTTGTTTCCTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CAA 90 bp CCTGAAGCCGTACTAGCGCTCTCCAGGGTGAGGCTTACGCCCATCTACAACAAATGCTTGATGATGGACTaGAAGCAGTGCAACGTCCCG +
Preference number: 5 (lower is better)
Translates to: PEAVLALSRVRLTPIYNKCLMMD*KQCNVP
Trigger: CGGGACGTTGCACTGCTTCAAGTCCATCATCAAGCA...TTTGTTGTAGATGGGCGTAAGCCTCACCCTGGAGAGCGCTAGTACGGCTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CAA 90 bp GCGCTCTCCAGGGTGAGGCTTACGCCCATCTACAACAAAGTTACACTTTTGCTACCGAACACCAGCGCGTaGATGAAGGTGAGCCCCATG +
Preference number: 5 (lower is better)
Translates to: ALSRVRLTPIYNKVTLLLPNTSA*MKVSPM
Trigger: CATGGGGCTCACCTTCATCAACGCGCTGGTGTTCGG...TAGCAAAAGTGTAACTTTGTTGTAGATGGGCGTAAGCCTCACCCTGGAGAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556868.1
CDS-3UTR CAA 90 bp AGGCCCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGATAAAAGCAATGACCTaGGCTCCAGGAGCTCCTGCC +
Preference number: 5 (lower is better)
Translates to: RPRGGRISPCHSCITLELIKAMT*APGAPA
Trigger: GGCAGGAGCTCCTGGAGCCAAGGTCATTGCTTTTAT...CAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS GCA 90 bp CTGGGTAGTGTTGTGAAGTCTTTGCAGATCACAGACACTGGTGAATaGCCAAGTCCAGCCGGCTGGGGAATGTCAGGCTTAGGTCAACTC +
Preference number: 5 (lower is better)
Translates to: LGSVVKSLQITDTGE*PSPAGWGMSGLGQL
Trigger: GAGTTGACCTAAGCCTGACATTCCCCAGCCGGCTGGACTTGGGCATTCACCAGTGTCTGTGATCTGCAAAGACTTCACAACACTACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS GCA 90 bp CGCTGCCTCCGAGCCCAGTGGCCCAGAACCTCTTCCATGTCAAAGTaGTCTTTGTTGCCTATGAGCTTATCTTTGCTCAATAGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: RCLRAQWPRTSSMSK*SLLPMSLSLLNRRL
Trigger: GAGCCTCCTATTGAGCAAAGATAAGCTCATAGGCAACAAAGAGCACTTTGACATGGAAGAGGTTCTGGGCCACTGGGCTCGGAGGCAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000555475.1
CDS-3UTR CAA 90 bp GTACAGGCCCAGCACGCTCTCTTGCTTGATGATGGACTTGAAGCAGTGCAACGTGCCCAGCACGCTCTCTaGCTTGATGATGGACTTGAA +
Preference number: 5 (lower is better)
Translates to: VQAQHALLLDDGLEAVQRAQHAL*LDDGLE
Trigger: TTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGGC...ACGTTGCACTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGGCCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CAA 90 bp CACTTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGCTGAGGTGGGAGAATaGCTTGAACCCGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: HFIPLTVSVQRHQAVQSPAEVGE*LEPVRQ
Trigger: CTGCCTCACGGGTTCAAGCAATTCTCCCACCTCAGC...TGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS TCA 90 bp TGTCCCTTCCCAGGTTGGATACTCAGTGCCACCTGGGTAGTGTTGTaGAGTCTTTGCAGATCACAGACACTGGTGAATGCCCAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: CPFPGWILSATWVVL*SLCRSQTLVNAQVQ
Trigger: CTGGACTTGGGCATTCACCAGTGTCTGTGATCTGCAAAGACTTCACAACACTACCCAGGTGGCACTGAGTATCCAACCTGGGAAGGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS CCA 90 bp CCAGTAGCCTCTCGTGAGAACAGCAGTTATGAGTTAATAGAGTGGTaGCAAGAGAACAGCCAACAACCTCCTTGGGGACCCACGTCAGCA +
Preference number: 5 (lower is better)
Translates to: PVASRENSSYELIEW*QENSQQPPWGPTSA
Trigger: TGCTGACGTGGGTCCCCAAGGAGGTTGTTGGCTGTTCTCTTGCCACCACTCTATTAACTCATAACTGCTGTTCTCACGAGAGGCTACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000555475.1
CDS CCA 90 bp CTGCCAGTAGCCTCTCGTGAGAACAGCAGTTATGAGTTAATAGAGTaGTGGCAAGAGAACAGCCAACAACCTCCTTGGGGACCCACGTCA +
Preference number: 5 (lower is better)
Translates to: LPVASRENSSYELIE*WQENSQQPPWGPTS
Trigger: TGACGTGGGTCCCCAAGGAGGTTGTTGGCTGTTCTCTTGCCACCACTCTATTAACTCATAACTGCTGTTCTCACGAGAGGCTACTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000555475.1
CDS CCA 90 bp CCCAAGATCTCAGACCAATTCAGGTTAAGCCTCTTGTTTACACTATaGCTGCACAGTGCACTGCCAGTGGGGCATGAACGACCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: PKISDQFRLSLLFTL*LHSALPVGHERPPE
Trigger: CTCAGGAGGTCGTTCATGCCCCACTGGCAGTGCACTGTGCAGCCATAGTGTAAACAAGAGGCTTAACCTGAATTGGTCTGAGATCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000555475.1
CDS-3UTR CAA 90 bp TTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGTGCTTGATGATGGACTaGAAGCAGTGCAACGTCCCG +
Preference number: 5 (lower is better)
Translates to: FCDTRRHTKFSSVPNTDQCLMMD*KQCNVP
Trigger: CGGGACGTTGCACTGCTTCAAGTCCATCATCAAGCA...CTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp AGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCTGCTTGATGATGGACTaGAAGCAGTGCAACGTCCCG +
Preference number: 5 (lower is better)
Translates to: SSVTPGGTPSFPLSLTQTCLMMD*KQCNVP
Trigger: CGGGACGTTGCACTGCTTCAAGTCCATCATCAAGCA...GGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp ATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCGCCCAGCACGCTCTCTaGCTTGATGATGGACTTGAA +
Preference number: 5 (lower is better)
Translates to: MQRIQFCDTRRHTKFSSVAQHAL*LDDGLE
Trigger: TTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGGC...GACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp TCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAACAGCTGCATCACACTaGAACTGTCCAGACCTCCAC +
Preference number: 5 (lower is better)
Translates to: SVTPGGTPSFPLSLTQTRTAASH*NCPDLH
Trigger: GTGGAGGTCTGGACAGTTCAAGTGTGATGCAGCTGT...TCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp CCCAGCACGCTCTCTTGCTTGATGATGGACTTGAAGCAGTGCAACGTCCCGCGGAACAAAGTTACACTTTaGCTATGGATGGAGACAGCC +
Preference number: 5 (lower is better)
Translates to: PSTLSCLMMDLKQCNVPRNKVTL*LWMETA
Trigger: GGCTGTCTCCATCCATAGCAAAAGTGTAACTTTGTT...CCGCGGGACGTTGCACTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554224.5
ENST00000556715.6
ENST00000556868.1
CDS-3UTR CAA 90 bp CGCAGCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAACAAAGTTACACTTTaGCTATGGATGGAGACAGCC +
Preference number: 5 (lower is better)
Translates to: RSIPAGSRAIDSGANLCPNKVTL*LWMETA
Trigger: GGCTGTCTCCATCCATAGCAAAAGTGTAACTTTGTT...GGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGCTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp CACTTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCATGCTTGATGATGGACTaGAAGCAGTGCAACGTCCCG +
Preference number: 5 (lower is better)
Translates to: HFIPLTVSVQRHQAVQSPCLMMD*KQCNVP
Trigger: CGGGACGTTGCACTGCTTCAAGTCCATCATCAAGCA...TGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp TCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACACAGACCAGAAGCACGCTCTCTTGCTaGATGATGGACTTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SVTPGGTPSFPLSLTQTRSTLSC*MMDLKQ
Trigger: CTGCTTCAAGTCCATCATCAAGCAAGAGAGCGTGCT...TCTGGTCTGTGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp CAGGGTGAGGCTTACGCCCATCTACAACAAAGTTACACTTTTGCTATGGATGGATCAGTCCCAAGGGCCTaGACCGTGTCAAACGGGTGT +
Preference number: 5 (lower is better)
Translates to: QGEAYAHLQQSYTFAMDGSVPRA*TVSNGC
Trigger: ACACCCGTTTGACACGGTCAAGGCCCTTGGGACTGA...TCCATCCATAGCAAAAGTGTAACTTTGTTGTAGATGGGCGTAAGCCTCACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556868.1
CDS-3UTR CAA 90 bp CCAGAGGCGGAAGGATTTCTCCTTGCCACAGCTGCATCACACTTGAACTGTCCAGAGGAGATCCAGATCTaGGATTCTTTCAGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: PEAEGFLLATAASHLNCPEEIQI*DSFSPK
Trigger: CTTGGGACTGAAAGAATCCAAGATCTGGATCTCCTC...TGGACAGTTCAAGTGTGATGCAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CAA 90 bp ATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCACCTTGATGCGAGGTTaGCTGCTCTCCCTTCAATGT +
Preference number: 5 (lower is better)
Translates to: MQRIQFCDTRRHTKFSSVTLMRG*LLSLQC
Trigger: ACATTGAAGGGAGAGCAGCAAACCTCGCATCAAGGT...GACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CAA 90 bp CACTTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCATTCTTGGCCAACACCTaGATGCGAGGTTTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: HFIPLTVSVQRHQAVQSPFLANT*MRGLLL
Trigger: GAGCAGCAAACCTCGCATCAAGGTGTTGGCCAAGAA...TGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CAA 90 bp TTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCACTGAGCACGAACACTTTATTCCCTaGACAGTTTCTGTACAGCGA +
Preference number: 5 (lower is better)
Translates to: FCTATPGCAKPSVVFTEHEHFIP*TVSVQR
Trigger: TCGCTGTACAGAAACTGTCAAGGGAATAAAGTGTTC...GTGCTCAGTGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp CTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCCCTATGAGCTTATCTTaGCTCAATAGGAGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: LISKIQPTSDRLHSSQHPPMSLS*LNRRLR
Trigger: TCTGAGCCTCCTATTGAGCAAAGATAAGCTCATAGG...GGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CAA 90 bp GCATCCCAGCAGGAAGCAGGGCAATCGACTCAGGGGCCAATTTATGTCCCAGGTTCAAAGTGCTCTTTGTaGCCTATGAGCTTATCTTTG +
Preference number: 5 (lower is better)
Translates to: ASQQEAGQSTQGPIYVPGSKCSL*PMSLSL
Trigger: CAAAGATAAGCTCATAGGCAACAAAGAGCACTTTGA...ACCTGGGACATAAATTGGCCCCTGAGTCGATTGCCCTGCTTCCTGCTGGGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CAA 90 bp CTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCTTCAGGTTAAGCCTCTaGTTTACACTATGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: LISKIQPTSDRLHSSQHPFRLSL*FTLWLH
Trigger: GTGCAGCCATAGTGTAAACAAGAGGCTTAACCTGAA...GGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CAA 90 bp CTGATCAGCAAAATTCAGCCCACGTCTGATAGACTCCACAGCTCGCAGCATCCCTGGGAAACTAGTCATTaGGACACAAGTTTAGGAAGC +
Preference number: 5 (lower is better)
Translates to: LISKIQPTSDRLHSSQHPWETSH*DTSLGS
Trigger: GCTTCCTAAACTTGTGTCCAAATGACTAGTTTCCCA...GGGATGCTGCGAGCTGTGGAGTCTATCAGACGTGGGCTGAATTTTGCTGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CAA 90 bp TTTATTCCCTTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCAATTATCTCGGCATaGGGACAACTGCCCCCATTT +
Preference number: 5 (lower is better)
Translates to: FIPLTVSVQRHQAVQSPVSIISA*GQLPPF
Trigger: AAATGGGGGCAGTTGTCCCAATGCCGAGATAATTGA...CACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAAGGGAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS-3UTR CAA 90 bp TTGACAGTTTCTGTACAGCGACACCAGGCTGTGCAAAGCCCAGTGTCGTCTTCAGAACACTTTATTCCCTaGACAGTTTCTGTACAGCGA +
Preference number: 5 (lower is better)
Translates to: LTVSVQRHQAVQSPVSSSEHFIP*TVSVQR
Trigger: TCGCTGTACAGAAACTGTCAAGGGAATAAAGTGTTC...TGAAGACGACACTGGGCTTTGCACAGCCTGGTGTCGCTGTACAGAAACTGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp GGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCCCTAACAGAACACTTTATTCCCTaGACAGTTTCTGTACAGCGA +
Preference number: 5 (lower is better)
Translates to: GSSSVTPGGTPSFPLSLTEHFIP*TVSVQR
Trigger: TCGCTGTACAGAAACTGTCAAGGGAATAAAGTGTTC...TGTTAGGGACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000554912.1
CDS-3UTR CAA 90 bp ATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCAACAAAGTTACACTTTaGCTATGGATGGAGACAGCC +
Preference number: 5 (lower is better)
Translates to: MQRIQFCDTRRHTKFSSVNKVTL*LWMETA
Trigger: GGCTGTCTCCATCCATAGCAAAAGTGTAACTTTGTT...GACAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000556505.5
CDS-3UTR CAA 90 bp GTATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGATGTCAAAGTGCTCTTaGTTGCCTATGAGCTTATCT +
Preference number: 5 (lower is better)
Translates to: VCRGSSSVTPGGTPSFPLMSKCS*LPMSLS
Trigger: AGATAAGCTCATAGGCAACAAAGAGCACTTTGACAT...CAGAGGAAAACTTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS CCA 72 bp CGTGCCCGACGCCCACGGTCGGGGCATGGGAGAGCCTaGACTGCACGCCCGCCCGGGCCCTCCCGGGGACAA +
Preference number: 6 (lower is better)
Translates to: RARRPRSGHGRA*TARPPGPSRGQ
Trigger: TTGTCCCCGGGAGGGCCCGGGCGGGCGTGCAGTCCAGGCTCTCCCATGCCCCGACCGTGGGCGTCGGGCACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556844.1
CDS GCA 72 bp GGACTGCACGCCCGCCCGGGCCCTCCCGGGGACAACTaGATGGGAGGAACCCCAGAGCCGCGACCGCGCCTC +
Preference number: 6 (lower is better)
Translates to: GLHARPGPPGDN*MGGTPEPRPRL
Trigger: GAGGCGCGGTCGCGGCTCTGGGGTTCCTCCCATGCAGTTGTCCCCGGGAGGGCCCGGGCGGGCGTGCAGTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556844.1
CDS CCA 72 bp CGGAGCCCGGGCAGGCGCGGTCAGGGATGGTGGGGATaGCGGCAGCAGCTAGACCCGCGCTGGTCCCTCGGC +
Preference number: 6 (lower is better)
Translates to: RSPGRRGQGWWG*RQQLDPRWSLG
Trigger: GCCGAGGGACCAGCGCGGGTCTAGCTGCTGCCGCCATCCCCACCATCCCTGACCGCGCCTGCCCGGGCTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000553359.5
ENST00000554060.1
ENST00000554224.5
ENST00000555949.2
ENST00000556715.6
ENST00000556868.1
ENST00000557438.1
CDS CCA 72 bp CTCCTGGCGCGGAGCCCGGGCAGGCGCGGTCAGGGATaGTGGGGATGGCGGCAGCAGCTAGACCCGCGCTGG +
Preference number: 6 (lower is better)
Translates to: LLARSPGRRGQG*WGWRQQLDPRW
Trigger: CCAGCGCGGGTCTAGCTGCTGCCGCCATCCCCACCATCCCTGACCGCGCCTGCCCGGGCTCCGCGCCAGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359232.8
ENST00000392908.7
ENST00000553359.5
ENST00000554060.1
ENST00000554224.5
ENST00000555949.2
ENST00000556715.6
ENST00000556844.1
ENST00000556868.1
ENST00000557438.1
CDS CCA 72 bp AGACCCGCGCTGGTCCCTCGGCGGCAGCTGACTCGCTaGATCCCCTCCGGCCCGCGGTCCCTCACCTCGGGC +
Preference number: 6 (lower is better)
Translates to: RPALVPRRQLTR*IPSGPRSLTSG
Trigger: GCCCGAGGTGAGGGACCGCGGGCCGGAGGGGATCCAGCGAGTCAGCTGCCGCCGAGGGACCAGCGCGGGTCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553359.5
ENST00000554060.1
ENST00000554224.5
ENST00000555949.2
ENST00000556715.6
ENST00000556868.1
CDS CCA 72 bp TGCACGCCCGCCCGGGCCCTCCCGGGGACAACTGCATaGGAGGAACCCCAGAGCCGCGACCGCGCCTCGGAG +
Preference number: 6 (lower is better)
Translates to: CTPARALPGTTA*EEPQSRDRASE
Trigger: CTCCGAGGCGCGGTCGCGGCTCTGGGGTTCCTCCCATGCAGTTGTCCCCGGGAGGGCCCGGGCGGGCGTGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556844.1
CDS GCA 72 bp AGGAACCCCAGAGCCGCGACCGCGCCTCGGAGAAGGTaGCCCACACCGGCTCGCCCGACCCACCCACCACCC +
Preference number: 6 (lower is better)
Translates to: RNPRAATAPRRR*PTPARPTHPPP
Trigger: GGGTGGTGGGTGGGTCGGGCGAGCCGGTGTGGGGCACCTTCTCCGAGGCGCGGTCGCGGCTCTGGGGTTCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556844.1
CDS TCA 72 bp CAGCAGCTAGACCCGCGCTGGTCCCTCGGCGGCAGCTaGCTCGCTGGATCCCCTCCGGCCCGCGGTCCCTCA +
Preference number: 6 (lower is better)
Translates to: QQLDPRWSLGGS*LAGSPPARGPS
Trigger: TGAGGGACCGCGGGCCGGAGGGGATCCAGCGAGTCAGCTGCCGCCGAGGGACCAGCGCGGGTCTAGCTGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553359.5
ENST00000554060.1
ENST00000554224.5
ENST00000555949.2
ENST00000556715.6
ENST00000556868.1
CDS CCA 72 bp AGGGGCGGCGTTCCAAGGCGTGACTCGGCGCCAGAGTaGTTCAGTGCCCTCCAAGGCCAGCCGAGTAGGGGG +
Preference number: 6 (lower is better)
Translates to: RGGVPRRDSAPE*FSALQGQPSRG
Trigger: CCCCCTACTCGGCTGGCCTTGGAGGGCACTGAACCACTCTGGCGCCGAGTCACGCCTTGGAACGCCGCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553359.5
ENST00000556201.1
ENST00000556844.1
CDS GCA 72 bp GCAGGCAGGACCAGAGCACCCAGCTCCCGGGTCTGGTaGTTAGGCTGCCTAGGAGGGTCTCCCAAGGAGGCC +
Preference number: 6 (lower is better)
Translates to: AGRTRAPSSRVW*LGCLGGSPKEA
Trigger: GGCCTCCTTGGGAGACCCTCCTAGGCAGCCTAAGCACCAGACCCGGGAGCTGGGTGCTCTGGTCCTGCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS GCA 72 bp AAGCAGAGAAGCCAGAGGCCCAACAGGGAAGTGCCGTaGCCGACGCCCACGGTCGGGGCATGGGAGAGCCTG +
Preference number: 6 (lower is better)
Translates to: KQRSQRPNREVP*PTPTVGAWESL
Trigger: CAGGCTCTCCCATGCCCCGACCGTGGGCGTCGGGCACGGCACTTCCCTGTTGGGCCTCTGGCTTCTCTGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556844.1
CDS GCA 72 bp ACCAGAGCACCCAGCTCCCGGGTCTGGTGCTTAGGCTaGCTAGGAGGGTCTCCCAAGGAGGCCGGGCACTCA +
Preference number: 6 (lower is better)
Translates to: TRAPSSRVWCLG*LGGSPKEAGHS
Trigger: TGAGTGCCCGGCCTCCTTGGGAGACCCTCCTAGGCAGCCTAAGCACCAGACCCGGGAGCTGGGTGCTCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS GCA 72 bp GGTAAAAGCAGAGAAGCCAGAGGCCCAACAGGGAAGTaGCGTGCCCGACGCCCACGGTCGGGGCATGGGAGA +
Preference number: 6 (lower is better)
Translates to: GKSREARGPTGK*RARRPRSGHGR
Trigger: TCTCCCATGCCCCGACCGTGGGCGTCGGGCACGGCACTTCCCTGTTGGGCCTCTGGCTTCTCTGCTTTTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556844.1
CDS TCA 72 bp ACAAAACCGCGTAGGAAGGGGCGGCGTTCCAAGGCGTaGCTCGGCGCCAGAGTGGTTCAGTGCCCTCCAAGG +
Preference number: 6 (lower is better)
Translates to: TKPRRKGRRSKA*LGARVVQCPPR
Trigger: CCTTGGAGGGCACTGAACCACTCTGGCGCCGAGTCACGCCTTGGAACGCCGCCCCTTCCTACGCGGTTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553359.5
ENST00000556844.1
CDS CCA 72 bp ATAGAGTGGTGGCAAGAGAACAGCCAACAACCTCCTTaGGGACCCACGTCAGCAGCTCTGGGGCCTGGGGCG +
Preference number: 6 (lower is better)
Translates to: IEWWQENSQQPP*GPTSAALGPGA
Trigger: CGCCCCAGGCCCCAGAGCTGCTGACGTGGGTCCCCAAGGAGGTTGTTGGCTGTTCTCTTGCCACCACTCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000555475.1
CDS CCA 72 bp CACCGCTACCCACTCTTCCGCCAGGGCTCTCAGCGCTaGCCGGGAGCTGAGGGTTTATTCGAGCCAAATCCA +
Preference number: 6 (lower is better)
Translates to: HRYPLFRQGSQR*PGAEGLFEPNP
Trigger: TGGATTTGGCTCGAATAAACCCTCAGCTCCCGGCCAGCGCTGAGAGCCCTGGCGGAAGAGTGGGTAGCGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556201.1
ENST00000556844.1
CDS CAA 72 bp CTGACCCCTCAGTACCCCTCAGTCTGTGACGAGCCCTaGCTCTCTGGGAGAGGAACTGTGGCCCAGTGTCCC +
Preference number: 6 (lower is better)
Translates to: LTPQYPSVCDEP*LSGRGTVAQCP
Trigger: GGGACACTGGGCCACAGTTCCTCTCCCAGAGAGCAAGGGCTCGTCACAGACTGAGGGGTACTGAGGGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS CAA 72 bp CCAGGGCACCCAGCGATTAGCAGCAAATTCTGGGCTTaGTGCCCCGCAGCTTCCCACTGGGTAACCGACCGG +
Preference number: 6 (lower is better)
Translates to: PGHPAISSKFWA*CPAASHWVTDR
Trigger: CCGGTCGGTTACCCAGTGGGAAGCTGCGGGGCACAAAGCCCAGAATTTGCTGCTAATCGCTGGGTGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556201.1
ENST00000556844.1
CDS TCA 72 bp TCCCCCTGCCGCTCATCAGCCTGGCGTGCTCACAAATaGCTCTGTCTCTGGGCCTCACTCTGGGCCTTACCT +
Preference number: 6 (lower is better)
Translates to: SPCRSSAWRAHK*LCLWASLWALP
Trigger: AGGTAAGGCCCAGAGTGAGGCCCAGAGACAGAGTCATTTGTGAGCACGCCAGGCTGATGAGCGGCAGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555888.1
CDS GCA 72 bp GGGCACCCAGCGATTAGCAGCAAATTCTGGGCTTTGTaGCCCGCAGCTTCCCACTGGGTAACCGACCGGGAA +
Preference number: 6 (lower is better)
Translates to: GHPAISSKFWAL*PAASHWVTDRE
Trigger: TTCCCGGTCGGTTACCCAGTGGGAAGCTGCGGGGCACAAAGCCCAGAATTTGCTGCTAATCGCTGGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556201.1
ENST00000556844.1
CDS CCA 72 bp CACCTGTGGGTGCAGCAGGCAGATCCCATGAGCCCCTaGAATCCTCACGTCCACTGGGAGGGTATGCATGTG +
Preference number: 6 (lower is better)
Translates to: HLWVQQADPMSP*NPHVHWEGMHV
Trigger: CACATGCATACCCTCCCAGTGGACGTGAGGATTCCAGGGGCTCATGGGATCTGCCTGCTGCACCCACAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555051.5
ENST00000555888.1
CDS CCA 72 bp GGGCAGGGTGGGCCGGGTATCTATGCCTTCTCAGGATaGGGTGCCAGTAGGCAAACAGCTAAAGGGACAGGC +
Preference number: 6 (lower is better)
Translates to: GQGGPGIYAFSG*GASRQTAKGTG
Trigger: GCCTGTCCCTTTAGCTGTTTGCCTACTGGCACCCCATCCTGAGAAGGCATAGATACCCGGCCCACCCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS CCA 72 bp AGCCCTTCACCCCCACCCGCTGGAGCTGATAGTGGGTaGGGAGCAAGGGTGGAGCAAACAGCGAGATCAGAA +
Preference number: 6 (lower is better)
Translates to: SPSPPPAGADSG*GARVEQTARSE
Trigger: TTCTGATCTCGCTGTTTGCTCCACCCTTGCTCCCCACCCACTATCAGCTCCAGCGGGTGGGGGTGAAGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556201.1
CDS CAA 90 bp CCGAAGCACCCTCCCACCCTGGAGGCCCAGTTCTTGGCCAACACCTaGATGCGAGGTTTGCTGCTCTCCCTTCAATGTTCTGGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: PKHPPTLEAQFLANT*MRGLLLSLQCSGAS
Trigger: AGAGGCCCCAGAACATTGAAGGGAGAGCAGCAAACCTCGCATCAAGGTGTTGGCCAAGAACTGGGCCTCCAGGGTGGGAGGGTGCTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS TCA 72 bp GGAGCAAACAGCGAGATCAGAAGCGGGAGGGGAAGGTaGGAATGGAATCCGCAGAGGACACGCCCCCTCTGT +
Preference number: 6 (lower is better)
Translates to: GANSEIRSGRGR*EWNPQRTRPLC
Trigger: ACAGAGGGGGCGTGTCCTCTGCGGATTCCATTCTCACCTTCCCCTCCCGCTTCTGATCTCGCTGTTTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556201.1
ENST00000556844.1
CDS GCA 72 bp CTCAGTACCCCCAGGACCTCAACAGCTGGAAGCCAATaGTTCAAGATTGGCCCGAAGCACCCTCCCACCCTG +
Preference number: 6 (lower is better)
Translates to: LSTPRTSTAGSQ*FKIGPKHPPTL
Trigger: CAGGGTGGGAGGGTGCTTCGGGCCAATCTTGAAGCATTGGCTTCCAGCTGTTGAGGTCCTGGGGGTACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS CCA 72 bp GGTGCCAGTAGGCAAACAGCTAAAGGGACAGGCTGCTaGAGACAGGGTAGGGGGTCCCCAAGATCTCAGACC +
Preference number: 6 (lower is better)
Translates to: GASRQTAKGTGC*RQGRGSPRSQT
Trigger: GGTCTGAGATCTTGGGGACCCCCTACCCTGTCTCCAGCAGCCTGTCCCTTTAGCTGTTTGCCTACTGGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS GCA 72 bp ACCCGTGAGGCAGAGGATGCAGTGAGGTCATGCCACTaGACTCCAGCCTGGGCGAGAAAGGAACATTCCATC +
Preference number: 6 (lower is better)
Translates to: TREAEDAVRSCH*TPAWARKEHSI
Trigger: GATGGAATGTTCCTTTCTCGCCCAGGCTGGAGTGCAGTGGCATGACCTCACTGCATCCTCTGCCTCACGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000555475.1
CDS CCA 72 bp AGCAAATTCTGGGCTTTGTGCCCCGCAGCTTCCCACTaGGTAACCGACCGGGAAGTTCTAACTCCCCTCAGC +
Preference number: 6 (lower is better)
Translates to: SKFWALCPAASH*VTDREVLTPLS
Trigger: GCTGAGGGGAGTTAGAACTTCCCGGTCGGTTACCCAGTGGGAAGCTGCGGGGCACAAAGCCCAGAATTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556201.1
ENST00000556844.1
CDS CAA 72 bp CCTCCCACCCTGGAGGCCCAGTTCTTGGCCAACACCTaGATGCGAGGTTTGCTGCTCTCCCTTCAATGTTCT +
Preference number: 6 (lower is better)
Translates to: PPTLEAQFLANT*MRGLLLSLQCS
Trigger: AGAACATTGAAGGGAGAGCAGCAAACCTCGCATCAAGGTGTTGGCCAAGAACTGGGCCTCCAGGGTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS CAA 90 bp AGGACGGTGGCTGTGGTTCTGGGCGCTATAGAGGAGATCCAGATCTaGGATTCTTTCAGTCCCAAGGGCCTTGACCGTGTCAAACGGGTG +
Preference number: 6 (lower is better)
Translates to: RTVAVVLGAIEEIQI*DSFSPKGLDRVKRV
Trigger: CACCCGTTTGACACGGTCAAGGCCCTTGGGACTGAAAGAATCCAAGATCTGGATCTCCTCTATAGCGCCCAGAACCACAGCCACCGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553359.5
ENST00000555051.5
ENST00000556868.1
CDS CCA 72 bp GACTGGTCTGGGTGGCTGACAGCAGAAGTTGTCCCCTaGGAGGCTGCACACACTATTTCTGGGATATCCCAT +
Preference number: 6 (lower is better)
Translates to: DWSGWLTAEVVP*EAAHTISGISH
Trigger: ATGGGATATCCCAGAAATAGTGTGTGCAGCCTCCCAGGGGACAACTTCTGCTGTCAGCCACCCAGACCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555051.5
ENST00000555888.1
CDS CCA 72 bp CAAGTACCATCTCAGTACCCCCAGGACCTCAACAGCTaGAAGCCAATGCTTCAAGATTGGCCCGAAGCACCC +
Preference number: 6 (lower is better)
Translates to: QVPSQYPQDLNS*KPMLQDWPEAP
Trigger: GGGTGCTTCGGGCCAATCTTGAAGCATTGGCTTCCAGCTGTTGAGGTCCTGGGGGTACTGAGATGGTACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS CCA 72 bp TCTTGTTTACACTATGGCTGCACAGTGCACTGCCAGTaGGGCATGAACGACCTCCTGAGACTGGCCCGTTCT +
Preference number: 6 (lower is better)
Translates to: SCLHYGCTVHCQ*GMNDLLRLARS
Trigger: AGAACGGGCCAGTCTCAGGAGGTCGTTCATGCCCCACTGGCAGTGCACTGTGCAGCCATAGTGTAAACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000555475.1
CDS CAA 90 bp AGGACGGTGGCTGTGGTTCTGGGCGCTATAGAGGAGATCCAGATCTaGGATTCTTTCAGTCCCAAGGGCCTAGGCTCACCAGAAAAGGAG +
Preference number: 6 (lower is better)
Translates to: RTVAVVLGAIEEIQI*DSFSPKGLGSPEKE
Trigger: CTCCTTTTCTGGTGAGCCTAGGCCCTTGGGACTGAAAGAATCCAAGATCTGGATCTCCTCTATAGCGCCCAGAACCACAGCCACCGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553574.1
ENST00000556873.5
CDS TCA 72 bp AAGCAGGACAGAAAACTCCCTTCGTGTAGAAACGTGTaGAGGCCGTGTGCTTCAGGACGGTGGCTGTGGTTC +
Preference number: 6 (lower is better)
Translates to: KQDRKLPSCRNV*RPCASGRWLWF
Trigger: GAACCACAGCCACCGTCCTGAAGCACACGGCCTTCACACGTTTCTACACGAAGGGAGTTTTCTGTCCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553359.5
ENST00000554912.1
ENST00000556868.1
ENST00000556873.5
CDS GCA 72 bp AGACTCGGGTGGCCCCTGATGATCCTAGGGTACAGCTaGAATTATATTCAACCAGGCAAAAGGGACCCGTGG +
Preference number: 6 (lower is better)
Translates to: RLGWPLMILGYS*NYIQPGKRDPW
Trigger: CCACGGGTCCCTTTTGCCTGGTTGAATATAATTGCAGCTGTACCCTAGGATCATCAGGGGCCACCCGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS CAA 72 bp GCTGTGGTTCTGGGCGCTATAGAGGAGATCCAGATCTaGGATTCTTTCAGTCCCAAGGGCCTTGACCGTGTC +
Preference number: 6 (lower is better)
Translates to: AVVLGAIEEIQI*DSFSPKGLDRV
Trigger: GACACGGTCAAGGCCCTTGGGACTGAAAGAATCCAAGATCTGGATCTCCTCTATAGCGCCCAGAACCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553359.5
ENST00000555051.5
ENST00000556868.1
CDS CAA 72 bp GCTGTGGTTCTGGGCGCTATAGAGGAGATCCAGATCTaGGATTCTTTCAGTCCCAAGGGCCTAGGCTCACCA +
Preference number: 6 (lower is better)
Translates to: AVVLGAIEEIQI*DSFSPKGLGSP
Trigger: TGGTGAGCCTAGGCCCTTGGGACTGAAAGAATCCAAGATCTGGATCTCCTCTATAGCGCCCAGAACCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553574.1
ENST00000556873.5
CDS CAA 72 bp GGACAGGGGAGGGCTTCACACTCAATTATCTCGGCATaGGGACAACTGCCCCCATTTCCAAGATGGGAAGAC +
Preference number: 6 (lower is better)
Translates to: GQGRASHSIISA*GQLPPFPRWED
Trigger: GTCTTCCCATCTTGGAAATGGGGGCAGTTGTCCCAATGCCGAGATAATTGAGTGTGAAGCCCTCCCCTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS GCA 72 bp ATGGCCGGTCACCCCCTCATCATAGGTCAAGACAACTaGTCCCTGATTATTGCTGTGTCCAAGGAAGCAGGA +
Preference number: 6 (lower is better)
Translates to: MAGHPLIIGQDN*SLIIAVSKEAG
Trigger: TCCTGCTTCCTTGGACACAGCAATAATCAGGGAGCAGTTGTCTTGACCTATGATGAGGGGGTGACCGGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000553359.5
ENST00000554912.1
ENST00000556868.1
ENST00000556873.5
CDS GCA 72 bp GTTGTGAAGTCTTTGCAGATCACAGACACTGGTGAATaGCCAAGTCCAGCCGGCTGGGGAATGTCAGGCTTA +
Preference number: 6 (lower is better)
Translates to: VVKSLQITDTGE*PSPAGWGMSGL
Trigger: TAAGCCTGACATTCCCCAGCCGGCTGGACTTGGGCATTCACCAGTGTCTGTGATCTGCAAAGACTTCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS GCA 72 bp GACATGGAGCTGTCCCTTCCCAGGTTGGATACTCAGTaGCACCTGGGTAGTGTTGTGAAGTCTTTGCAGATC +
Preference number: 6 (lower is better)
Translates to: DMELSLPRLDTQ*HLGSVVKSLQI
Trigger: GATCTGCAAAGACTTCACAACACTACCCAGGTGGCACTGAGTATCCAACCTGGGAAGGGACAGCTCCATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS CCA 72 bp GACAGGGGAGGGCTTCACACTCAATTATCTCGGCATTaGGACAACTGCCCCCATTTCCAAGATGGGAAGACA +
Preference number: 6 (lower is better)
Translates to: DRGGLHTQLSRH*DNCPHFQDGKT
Trigger: TGTCTTCCCATCTTGGAAATGGGGGCAGTTGTCCCAATGCCGAGATAATTGAGTGTGAAGCCCTCCCCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS CAA 90 bp CTCTCCAGGGTGAGGCTTACGCCCATCTACAACAAAGTTACACTTTaGCTATGGATGGAGACAGCCCCTAGCTCAGAAAGTAAAGGCGGT +
Preference number: 6 (lower is better)
Translates to: LSRVRLTPIYNKVTL*LWMETAPSSESKGG
Trigger: ACCGCCTTTACTTTCTGAGCTAGGGGCTGTCTCCATCCATAGCAAAAGTGTAACTTTGTTGTAGATGGGCGTAAGCCTCACCCTGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554912.1
ENST00000556505.5
ENST00000556868.1
CDS CAA 90 bp ACCTCTTCCATGTCAAAGTGCTCTTTGTTGCCTATGAGCTTATCTTaGCTCAATAGGAGGCTCAGAGTTGCAGAGCGGGCGGTGGGAGTA +
Preference number: 6 (lower is better)
Translates to: TSSMSKCSLLPMSLS*LNRRLRVAERAVGV
Trigger: TACTCCCACCGCCCGCTCTGCAACTCTGAGCCTCCTATTGAGCAAAGATAAGCTCATAGGCAACAAAGAGCACTTTGACATGGAAGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS CCA 72 bp AGAAGTTGTCCCCTGGGAGGCTGCACACACTATTTCTaGGATATCCCATTAATCCAAACACCTGACATGGGC +
Preference number: 6 (lower is better)
Translates to: RSCPLGGCTHYF*DIPLIQTPDMG
Trigger: GCCCATGTCAGGTGTTTGGATTAATGGGATATCCCAGAAATAGTGTGTGCAGCCTCCCAGGGGACAACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555888.1
CDS CCA 72 bp GCCTCTCGTGAGAACAGCAGTTATGAGTTAATAGAGTaGTGGCAAGAGAACAGCCAACAACCTCCTTGGGGA +
Preference number: 6 (lower is better)
Translates to: ASRENSSYELIE*WQENSQQPPWG
Trigger: TCCCCAAGGAGGTTGTTGGCTGTTCTCTTGCCACCACTCTATTAACTCATAACTGCTGTTCTCACGAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000555475.1
CDS CCA 72 bp TCAGACCAATTCAGGTTAAGCCTCTTGTTTACACTATaGCTGCACAGTGCACTGCCAGTGGGGCATGAACGA +
Preference number: 6 (lower is better)
Translates to: SDQFRLSLLFTL*LHSALPVGHER
Trigger: TCGTTCATGCCCCACTGGCAGTGCACTGTGCAGCCATAGTGTAAACAAGAGGCTTAACCTGAATTGGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000555475.1
CDS GCA 72 bp CGAGCCCAGTGGCCCAGAACCTCTTCCATGTCAAAGTaGTCTTTGTTGCCTATGAGCTTATCTTTGCTCAAT +
Preference number: 6 (lower is better)
Translates to: RAQWPRTSSMSK*SLLPMSLSLLN
Trigger: ATTGAGCAAAGATAAGCTCATAGGCAACAAAGAGCACTTTGACATGGAAGAGGTTCTGGGCCACTGGGCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554912.1
ENST00000555475.1
CDS CAA 72 bp ATGTCAAAGTGCTCTTTGTTGCCTATGAGCTTATCTTaGCTCAATAGGAGGCTCAGAGTTGCAGAGCGGGCG +
Preference number: 6 (lower is better)
Translates to: MSKCSLLPMSLS*LNRRLRVAERA
Trigger: CGCCCGCTCTGCAACTCTGAGCCTCCTATTGAGCAAAGATAAGCTCATAGGCAACAAAGAGCACTTTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554912.1
CDS GCA 72 bp CCTCATCATAGGTCAAGACAACTGCTCCCTGATTATTaGTGTGTCCAAGGAAGCAGGACAGAAAACTCCCTT +
Preference number: 6 (lower is better)
Translates to: PHHRSRQLLPDY*CVQGSRTENSL
Trigger: AAGGGAGTTTTCTGTCCTGCTTCCTTGGACACAGCAATAATCAGGGAGCAGTTGTCTTGACCTATGATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553359.5
ENST00000554912.1
ENST00000556868.1
ENST00000556873.5
CDS CAA 72 bp GTGAGGCTTACGCCCATCTACAACAAAGTTACACTTTaGCTATGGATGGAGACAGCCCCTAGCTCAGAAAGT +
Preference number: 6 (lower is better)
Translates to: VRLTPIYNKVTL*LWMETAPSSES
Trigger: ACTTTCTGAGCTAGGGGCTGTCTCCATCCATAGCAAAAGTGTAACTTTGTTGTAGATGGGCGTAAGCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554912.1
ENST00000556505.5
ENST00000556868.1
CDS TCA 72 bp ACACTATTTCTGGGATATCCCATTAATCCAAACACCTaGCATGGGCAGGAGGCTCCAGAGATGTTGGACTTT +
Preference number: 6 (lower is better)
Translates to: TLFLGYPINPNT*HGQEAPEMLDF
Trigger: AAAGTCCAACATCTCTGGAGCCTCCTGCCCATGTCAGGTGTTTGGATTAATGGGATATCCCAGAAATAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555888.1