RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC25A26 (Homo sapiens)

Ensembl gene IDs: ENSG00000144741, ENSG00000282739

Ensembl transcript IDs: ENST00000336733.10, ENST00000354883.11, ENST00000413054.5, ENST00000464350.6, ENST00000483224.5, ENST00000484768.1, ENST00000632575.1, ENST00000632740.1, ENST00000633238.1, ENST00000633644.1, ENST00000633701.1, ENST00000634032.1, ENST00000676754.1

Found 822 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACATCACCAGTaGAGCAGGACTGCCGCTGGGTCCTGCCCCGAGTGCCAAGGGTCG +
Preference number: 1 (lower is better)
Translates to: PEPGGSDQEHSPHHQ*SRTAAGSCPECQGS
Trigger: CGACCCTTGGCACTCGGGGCAGGACCCAGCGGCAGTCCTGCTGCACTGGTGATGTGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 90 bp GCCACCTCCCCAAAGCATGTGACGCCAGTCCCGAGTCCACGCCACTaGCAGGACAGCTCCCCGGGAAACAGAGGGTGCCACTGCTGTTGG +
Preference number: 1 (lower is better)
Translates to: ATSPKHVTPVPSPRH*QDSSPGNRGCHCCW
Trigger: CCAACAGCAGTGGCACCCTCTGTTTCCCGGGGAGCTGTCCTGTCAGTGGCGTGGACTCGGGACTGGCGTCACATGCTTTGGGGAGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 90 bp CAGCGCACAGCCAAGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTaGCCAAGAGCATTCTCCACATCACCAGTGCAGCAGGACTGCCGC +
Preference number: 1 (lower is better)
Translates to: QRTAKCAKWPGAGWE*PRAFSTSPVQQDCR
Trigger: GCGGCAGTCCTGCTGCACTGGTGATGTGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACTTGGCTGTGCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 90 bp CACCGTGCCCTCCTGCACGAAGCCAGCTGGGCCCACCTAGTCACTTaGGTTGCAGCTGCTTTCTCTCACACACCACAGGGGGCGCTGGAC +
Preference number: 1 (lower is better)
Translates to: HRALLHEASWAHLVT*VAAAFSHTPQGALD
Trigger: GTCCAGCGCCCCCTGTGGTGTGTGAGAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGCCCAGCTGGCTTCGTGCAGGAGGGCACGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR TCA 90 bp GATCGTGCCCTCCTGCACGAAGCCAGCTGGGCCCACCTAGTCACTTaGGTTGCAGCTGCTTTCTCTCACACACCACAGGGGGCGCTGGAC +
Preference number: 1 (lower is better)
Translates to: DRALLHEASWAHLVT*VAAAFSHTPQGALD
Trigger: GTCCAGCGCCCCCTGTGGTGTGTGAGAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGCCCAGCTGGCTTCGTGCAGGAGGGCACGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 90 bp CCACATCACCAGTGCAGCAGGACTGCCGCTGGGTCCTGCCCCGAGTaGCAAGGGTCGCTCTACCCCAGTAACCACGATAGAATGCTGACG +
Preference number: 1 (lower is better)
Translates to: PHHQCSRTAAGSCPE*QGSLYPSNHDRMLT
Trigger: CGTCAGCATTCTATCGTGGTTACTGGGGTAGAGCGACCCTTGGCACTCGGGGCAGGACCCAGCGGCAGTCCTGCTGCACTGGTGATGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 90 bp AGCCCAGTACTTGCTTGTTTCCAATGGCCACCTCCCCAAAGCATGTaGCGCCAGTCCCGAGTCCACGCCACTGACAGGACAGCTCCCCGG +
Preference number: 1 (lower is better)
Translates to: SPVLACFQWPPPQSM*RQSRVHATDRTAPR
Trigger: CCGGGGAGCTGTCCTGTCAGTGGCGTGGACTCGGGACTGGCGTCACATGCTTTGGGGAGGTGGCCATTGGAAACAAGCAAGTACTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 90 bp CAGCAGCAGCAGCTCCCCCATGACCTTTGCCTTGCACAGTGGAGCTaGGCAGCCTGTCCTCTGTGTGGGGACGAAGACTCCCACAGCAGT +
Preference number: 1 (lower is better)
Translates to: QQQQLPHDLCLAQWS*AACPLCGDEDSHSS
Trigger: ACTGCTGTGGGAGTCTTCGTCCCCACACAGAGGACAGGCTGCTCAGCTCCACTGTGCAAGGCAAAGGTCATGGGGGAGCTGCTGCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 90 bp TGCCCTCCTGCACGAAGCCAGCTGGGCCCACCTAGTCACTTGAGTTaGAGCTGCTTTCTCTCACACACCACAGGGGGCGCTGGACACATC +
Preference number: 1 (lower is better)
Translates to: CPPARSQLGPPSHLS*SCFLSHTTGGAGHI
Trigger: GATGTGTCCAGCGCCCCCTGTGGTGTGTGAGAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGCCCAGCTGGCTTCGTGCAGGAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
3UTR GCA 90 bp GAGCATTCTCCACATCACCAGTGCAGCAGGACTGCCGCTGGGTCCTaGCCCGAGTGCCAAGGGTCGCTCTACCCCAGTAACCACGATAGA +
Preference number: 1 (lower is better)
Translates to: EHSPHHQCSRTAAGS*PECQGSLYPSNHDR
Trigger: TCTATCGTGGTTACTGGGGTAGAGCGACCCTTGGCACTCGGGGCAGGACCCAGCGGCAGTCCTGCTGCACTGGTGATGTGGAGAATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CCA 90 bp CAGAACACGGTGGCCGGGTCGTATGCAGTGACTGCAACACCGAAGTaGACTGTTACTCCAGGGGACAAGCCTTCCACCCCCAGCCTGTGT +
Preference number: 1 (lower is better)
Translates to: QNTVAGSYAVTATPK*TVTPGDKPSTPSLC
Trigger: ACACAGGCTGGGGGTGGAAGGCTTGTCCCCTGGAGTAACAGTCCACTTCGGTGTTGCAGTCACTGCATACGACCCGGCCACCGTGTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 90 bp ACATCCGGTTTACATGCTCAGCAGCCAGCAGCAGCAGCTCCCCCATaGCCTTTGCCTTGCACAGTGGAGCTGAGCAGCCTGTCCTCTGTG +
Preference number: 1 (lower is better)
Translates to: TSGLHAQQPAAAAPP*PLPCTVELSSLSSV
Trigger: CACAGAGGACAGGCTGCTCAGCTCCACTGTGCAAGGCAAAGGTCATGGGGGAGCTGCTGCTGCTGGCTGCTGAGCATGTAAACCGGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 90 bp CCTGCACGAAGCCAGCTGGGCCCACCTAGTCACTTGAGTTGCAGCTaGTTTCTCTCACACACCACAGGGGGCGCTGGACACATCTCTGTA +
Preference number: 1 (lower is better)
Translates to: PARSQLGPPSHLSCS*FLSHTTGGAGHISV
Trigger: TACAGAGATGTGTCCAGCGCCCCCTGTGGTGTGTGAGAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGCCCAGCTGGCTTCGTGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR GCA 90 bp CCTGCACGAAGCCAGCTGGGCCCACCTAGTCACTTGAGTTGCAGCTaGTTTCTCTCACACACCACAGGGGGCGCTGGACACATCTCAAAC +
Preference number: 1 (lower is better)
Translates to: PARSQLGPPSHLSCS*FLSHTTGGAGHISN
Trigger: GTTTGAGATGTGTCCAGCGCCCCCTGTGGTGTGTGAGAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGCCCAGCTGGCTTCGTGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 90 bp TGGCGCTGTCCTTCAGAACACGGTGGCCGGGTCGTATGCAGTGACTaGAACACCGAAGTGGACTGTTACTCCAGGGGACAAGCCTTCCAC +
Preference number: 1 (lower is better)
Translates to: WRCPSEHGGRVVCSD*NTEVDCYSRGQAFH
Trigger: GTGGAAGGCTTGTCCCCTGGAGTAACAGTCCACTTCGGTGTTGCAGTCACTGCATACGACCCGGCCACCGTGTTCTGAAGGACAGCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 90 bp TCCTGCCTTTTCAAAGCTGGCCCAGGCCCTCCTTTCAGTCTGACATaGGAATGGCGAGAATGGCTCACCCACCGTGCCCTCCTGCACGAA +
Preference number: 1 (lower is better)
Translates to: SCLFKAGPGPPFSLT*EWREWLTHRALLHE
Trigger: TTCGTGCAGGAGGGCACGGTGGGTGAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGCCTGGGCCAGCTTTGAAAAGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR GCA 90 bp GCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTaGACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGT +
Preference number: 1 (lower is better)
Translates to: ALGPIVQTAAQRKRV*TAGPSLDRSGGEAC
Trigger: ACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR GCA 90 bp TCCTTTCAGTCTGACATGAGAATGGCGAGAATGGCTCACCCACCGTaGCCTCCTGCACGAAGCCAGCTGGGCCCACCTAGTCACTTGAGT +
Preference number: 1 (lower is better)
Translates to: SFQSDMRMARMAHPP*PPARSQLGPPSHLS
Trigger: ACTCAAGTGACTAGGTGGGCCCAGCTGGCTTCGTGCAGGAGGGCACGGTGGGTGAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR GCA 90 bp CCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATaGTCAGCAGCCAGCAGCAGCAGCTCCCCCATGACCTTTGCCTTG +
Preference number: 1 (lower is better)
Translates to: PETTMAMVGKDIRFT*SAASSSSSPMTFAL
Trigger: CAAGGCAAAGGTCATGGGGGAGCTGCTGCTGCTGGCTGCTGAGCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CCA 90 bp TGTGTGGGGACGAAGACTCCCACAGCAGTGACTCTAACCCATCTTTaGCGCTGTCCTTCAGAACACGGTGGCCGGGTCGTATGCAGTGAC +
Preference number: 1 (lower is better)
Translates to: CVGTKTPTAVTLTHL*RCPSEHGGRVVCSD
Trigger: GTCACTGCATACGACCCGGCCACCGTGTTCTGAAGGACAGCGCCAAAGATGGGTTAGAGTCACTGCTGTGGGAGTCTTCGTCCCCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 90 bp TTTCATCCTGCCTTTTCAAAGCTGGCCCAGGCCCTCCTTTCAGTCTaGCATGAGAATGGCGAGAATGGCTCACCCACCGTGCCCTCCTGC +
Preference number: 1 (lower is better)
Translates to: FHPAFSKLAQALLSV*HENGENGSPTVPSC
Trigger: GCAGGAGGGCACGGTGGGTGAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGCCTGGGCCAGCTTTGAAAAGGCAGGATGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR TCA 90 bp TCTTTGGCGCTGTCCTTCAGAACACGGTGGCCGGGTCGTATGCAGTaGCTGCAACACCGAAGTGGACTGTTACTCCAGGGGACAAGCCTT +
Preference number: 1 (lower is better)
Translates to: SLALSFRTRWPGRMQ*LQHRSGLLLQGTSL
Trigger: AAGGCTTGTCCCCTGGAGTAACAGTCCACTTCGGTGTTGCAGTCACTGCATACGACCCGGCCACCGTGTTCTGAAGGACAGCGCCAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 90 bp ACCCATCTTTGGCGCTGTCCTTCAGAACACGGTGGCCGGGTCGTATaGAGTGACTGCAACACCGAAGTGGACTGTTACTCCAGGGGACAA +
Preference number: 1 (lower is better)
Translates to: THLWRCPSEHGGRVV*SDCNTEVDCYSRGQ
Trigger: TTGTCCCCTGGAGTAACAGTCCACTTCGGTGTTGCAGTCACTGCATACGACCCGGCCACCGTGTTCTGAAGGACAGCGCCAAAGATGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 90 bp TCAGATGTCCATGGTGCAACTCTTACGGCATCTGGTTGGTGGGGCTaGGGATGCACAGGGACCTCAAGCTCTGGTTCCTGCTTGGTGTCT +
Preference number: 1 (lower is better)
Translates to: SDVHGATLTASGWWG*GCTGTSSSGSCLVS
Trigger: AGACACCAAGCAGGAACCAGAGCTTGAGGTCCCTGTGCATCCTCAGCCCCACCAACCAGATGCCGTAAGAGTTGCACCATGGACATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 90 bp CCTGCAAAAGCTCCACAGACTGCTGACTGCCAAGAATCCACCACATaGTCCTGCCTCCAGGACCAGAGGGCAACTTGGGACTTCTTTAGC +
Preference number: 1 (lower is better)
Translates to: PAKAPQTADCQESTT*SCLQDQRATWDFFS
Trigger: GCTAAAGAAGTCCCAAGTTGCCCTCTGGTCCTGGAGGCAGGATCATGTGGTGGATTCTTGGCAGTCAGCAGTCTGTGGAGCTTTTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 90 bp ACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTaGTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCG +
Preference number: 1 (lower is better)
Translates to: TAGPSLDRSGGEACL*FKDSFCQLPTASCA
Trigger: CGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
3UTR GCA 90 bp GACTTTAGCAAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTaGATCTTCATTAACTTCAGGCAGTCCAGAGCGCGCGGAAGCCCA +
Preference number: 1 (lower is better)
Translates to: DFSKVVSPGLHRATA*IFINFRQSRARGSP
Trigger: TGGGCTTCCGCGCGCTCTGGACTGCCTGAAGTTAATGAAGATGCAGGCTGTAGCTCTGTGGAGTCCGGGTGATACAACCTTGCTAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CCA 90 bp CCCTCACGTCTTTCCTGGGTGTGCACATGGCCTTGCACCTGCATGTaGCTGTCTAGATCCCCAGGAATGTATTGGACCTTTTCAAAGCCC +
Preference number: 1 (lower is better)
Translates to: PSRLSWVCTWPCTCM*LSRSPGMYWTFSKP
Trigger: GGGCTTTGAAAAGGTCCAATACATTCCTGGGGATCTAGACAGCCACATGCAGGTGCAAGGCCATGTGCACACCCAGGAAAGACGTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 90 bp CCTGCAAAAGCTCCACAGACTGCTGACTGCCAAGAATCCACCACATaGTCCTGCCTCCAGGACCAGAGGGCTTTTAAGGACTCCCATAAG +
Preference number: 1 (lower is better)
Translates to: PAKAPQTADCQESTT*SCLQDQRAFKDSHK
Trigger: CTTATGGGAGTCCTTAAAAGCCCTCTGGTCCTGGAGGCAGGATCATGTGGTGGATTCTTGGCAGTCAGCAGTCTGTGGAGCTTTTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483224.5
ENST00000632740.1
3UTR GCA 90 bp GACAGAAGTGGAGGTGAGGCTTGTCTCTGCTTCAAGGACTCTTTCTaGCAACTTCCAACAGCAAGCTGTGCGTTCGGTCATAAGCCCCCA +
Preference number: 1 (lower is better)
Translates to: DRSGGEACLCFKDSF*QLPTASCAFGHKPP
Trigger: TGGGGGCTTATGACCGAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACCTCCACTTCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
3UTR TCA 90 bp CTCCTGCTCGGCAAACTAGATCAGGGCAAATCAATGCAAATCCTGTaGATGGGGCTTTCCGTGTTGCTGCCAGATAGGCCACATGGTGTC +
Preference number: 1 (lower is better)
Translates to: LLLGKLDQGKSMQIL*MGLSVLLPDRPHGV
Trigger: GACACCATGTGGCCTATCTGGCAGCAACACGGAAAGCCCCATTCACAGGATTTGCATTGATTTGCCCTGATCTAGTTTGCCGAGCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CCA 90 bp GGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATaGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGC +
Preference number: 1 (lower is better)
Translates to: GIQANDFIPASLYHG*HNLHAGILAQLVFS
Trigger: GCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR TCA 90 bp CACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCCAATaGCTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCA +
Preference number: 1 (lower is better)
Translates to: HRPRFLLLALWHTGQ*LHTSQPIPRMAQSP
Trigger: TGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR CCA 90 bp TTGGGTTCAAGCGTCACTCATCTGTACATAGTTGTAACTCCCATGTaGAGTATCAGTCGCTCACAGGACTTGGATCGTGCCCTCCTGCAC +
Preference number: 1 (lower is better)
Translates to: LGSSVTHLYIVVTPM*SISRSQDLDRALLH
Trigger: GTGCAGGAGGGCACGATCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGATGAGTGACGCTTGAACCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 90 bp TCTAACAGGTGGGTTGGGAGCTGCTTAAACGGTCAAGTGGGGGTCTaGCAGGTTCGTTCTTTCCTTGTAGGGGATTCTTCCTGGACTTTA +
Preference number: 1 (lower is better)
Translates to: SNRWVGSCLNGQVGV*QVRSFLVGDSSWTL
Trigger: TAAAGTCCAGGAAGAATCCCCTACAAGGAAAGAACGAACCTGTCAGACCCCCACTTGACCGTTTAAGCAGCTCCCAACCCACCTGTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 90 bp CAAGCTCTGGTTCCTGCTTGGTGTCTGTGTCAGTTTCTGTTAGCATaGACAGCAGCTGGTTCCTCTGTGTACCAAGAACCCAGCGCTTTA +
Preference number: 1 (lower is better)
Translates to: QALVPAWCLCQFLLA*TAAGSSVYQEPSAL
Trigger: TAAAGCGCTGGGTTCTTGGTACACAGAGGAACCAGCTGCTGTTCATGCTAACAGAAACTGACACAGACACCAAGCAGGAACCAGAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CCA 90 bp TCCTGCTTGGTGTCTGTGTCAGTTTCTGTTAGCATGAACAGCAGCTaGTTCCTCTGTGTACCAAGAACCCAGCGCTTTACAGTTGACCCT +
Preference number: 1 (lower is better)
Translates to: SCLVSVSVSVSMNSS*FLCVPRTQRFTVDP
Trigger: AGGGTCAACTGTAAAGCGCTGGGTTCTTGGTACACAGAGGAACCAGCTGCTGTTCATGCTAACAGAAACTGACACAGACACCAAGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 90 bp CTCCTCCCCCAGGATTTGCTGCTGTTGCTGTTTATTGTTACAGCTTaGCTAGTGACTTTTCCTGGACAAAGGCTATATAAAGTCCGTCCC +
Preference number: 1 (lower is better)
Translates to: LLPQDLLLLLFIVTA*LVTFPGQRLYKVRP
Trigger: GGGACGGACTTTATATAGCCTTTGTCCAGGAAAAGTCACTAGGCAAGCTGTAACAATAAACAGCAACAGCAGCAAATCCTGGGGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 90 bp GTGAAGAAAAAGCCAATGGCATCTCTAGATGGGAAAGGTAACTTTTaGCTGTCTTCTAACAGGTGGGTTGGGAGCTGCTTAAACGGTCAA +
Preference number: 1 (lower is better)
Translates to: VKKKPMASLDGKGNF*LSSNRWVGSCLNGQ
Trigger: TTGACCGTTTAAGCAGCTCCCAACCCACCTGTTAGAAGACAGTCAAAAGTTACCTTTCCCATCTAGAGATGCCATTGGCTTTTTCTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 90 bp AGTGTGATCATAAAGGTGATCAGTACTCACAGACTTCTAATTAGATaGGGTCAGATGTCCATGGTGCAACTCTTACGGCATCTGGTTGGT +
Preference number: 1 (lower is better)
Translates to: SVIIKVISTHRLLIR*GQMSMVQLLRHLVG
Trigger: ACCAACCAGATGCCGTAAGAGTTGCACCATGGACATCTGACCTCATCTAATTAGAAGTCTGTGAGTACTGATCACCTTTATGATCACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 90 bp GTAATTAAAACCAGCAGCCTAGTTACCCAGAAAGAGTGCTTGCTATaGACCTGTAGTTCAATCTTTCTTTCTTTTTCAACAAAGCCTACC +
Preference number: 1 (lower is better)
Translates to: VIKTSSLVTQKECLL*TCSSIFLSFSTKPT
Trigger: GGTAGGCTTTGTTGAAAAAGAAAGAAAGATTGAACTACAGGTGCATAGCAAGCACTCTTTCTGGGTAACTAGGCTGCTGGTTTTAATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR GCA 90 bp AATCTGAGGGTAATTAAAACCAGCAGCCTAGTTACCCAGAAAGAGTaGTTGCTATGCACCTGTAGTTCAATCTTTCTTTCTTTTTCAACA +
Preference number: 1 (lower is better)
Translates to: NLRVIKTSSLVTQKE*LLCTCSSIFLSFST
Trigger: TGTTGAAAAAGAAAGAAAGATTGAACTACAGGTGCATAGCAAGCACTCTTTCTGGGTAACTAGGCTGCTGGTTTTAATTACCCTCAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR TCA 90 bp CCAAGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCATCCTGCCAGCCCCTGTaGCCGCCAGACCCCATGCAG +
Preference number: 2 (lower is better)
Translates to: PSAPNGPEPGGSDQEHSPSCQPL*PPDPMQ
Trigger: CTGCATGGGGTCTGGCGGTCACAGGGGCTGGCAGGA...TGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CAA 90 bp CCACCGTGCCCTCCTGCACGAAGCCAGCTGGGCCCACCTAGTCACTaGAGTTGCAGCTGCTTTCTCTCACACACCACAGGGGGCGCTGGA +
Preference number: 2 (lower is better)
Translates to: PPCPPARSQLGPPSH*SCSCFLSHTTGGAG
Trigger: TCCAGCGCCCCCTGTGGTGTGTGAGAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGCCCAGCTGGCTTCGTGCAGGAGGGCACGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR TCA 90 bp CGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTCCTGCCAGCCCCTGTaGCCGCCAGACCCCATGCAG +
Preference number: 2 (lower is better)
Translates to: RKRVCTAGPSLDRSGGEASCQPL*PPDPMQ
Trigger: CTGCATGGGGTCTGGCGGTCACAGGGGCTGGCAGGA...AGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000634032.1
3UTR-3UTR TCA 90 bp TCAGGCAGTCCAGAGCGCGCGGAAGCCCAGTACTTGCTTGTTTCCAATGGCCACCCGAGTCCACGCCACTaGCAGGACAGCTCCCCGGGA +
Preference number: 2 (lower is better)
Translates to: SGSPERAEAQYLLVSNGHPSPRH*QDSSPG
Trigger: TCCCGGGGAGCTGTCCTGTCAGTGGCGTGGACTCGG...GTGGCCATTGGAAACAAGCAAGTACTGGGCTTCCGCGCGCTCTGGACTGCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR TCA 90 bp CCAAGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACCTCCCCAAAGCATGTaGCGCCAGTCCCGAGTCCAC +
Preference number: 2 (lower is better)
Translates to: PSAPNGPEPGGSDQEHSPPPQSM*RQSRVH
Trigger: GTGGACTCGGGACTGGCGTCACATGCTTTGGGGAGG...TGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CAA 90 bp GGATCGTGCCCTCCTGCACGAAGCCAGCTGGGCCCACCTAGTCACTaGAGTTGCAGCTGCTTTCTCTCACACACCACAGGGGGCGCTGGA +
Preference number: 2 (lower is better)
Translates to: GSCPPARSQLGPPSH*SCSCFLSHTTGGAG
Trigger: TCCAGCGCCCCCTGTGGTGTGTGAGAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGCCCAGCTGGCTTCGTGCAGGAGGGCACGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR GCA 90 bp CGAGAATGGCTCACCCACCGTGCCCTCCTGCACGAAGCCAGCTGGGCCCACCTATCCCAGACTGATGGCTaGCATTCGAGGGAAGACACC +
Preference number: 2 (lower is better)
Translates to: REWLTHRALLHEASWAHLSQTDG*HSREDT
Trigger: GGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGA...TAGGTGGGCCCAGCTGGCTTCGTGCAGGAGGGCACGGTGGGTGAGCCATTCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483224.5
ENST00000632740.1
3UTR CAA 90 bp ACATGCTCAGCAGCCAGCAGCAGCAGCTCCCCCATGACCTTTGCCTaGCACAGTGGAGCTGAGCAGCCTGTCCTCTGTGTGGGGACGAAG +
Preference number: 2 (lower is better)
Translates to: TCSAASSSSSPMTFA*HSGAEQPVLCVGTK
Trigger: CTTCGTCCCCACACAGAGGACAGGCTGCTCAGCTCCACTGTGCAAGGCAAAGGTCATGGGGGAGCTGCTGCTGCTGGCTGCTGAGCATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR TCA 90 bp ACCCAGCCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATGCCCGAGTCCACGCCACTaGCAGGACAGCTCCCCGGGA +
Preference number: 2 (lower is better)
Translates to: TQPETTMAMVGKDIRFTCPSPRH*QDSSPG
Trigger: TCCCGGGGAGCTGTCCTGTCAGTGGCGTGGACTCGG...GCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR GCA 90 bp CAGTCTGACATGAGAATGGCGAGAATGGCTCACCCACCGTGCCCTCCTGCACGAATGGCTCACCCACCGTaGCCTCCTGCACGAAGCCAG +
Preference number: 2 (lower is better)
Translates to: QSDMRMARMAHPPCPPARMAHPP*PPARSQ
Trigger: CTGGCTTCGTGCAGGAGGGCACGGTGGGTGAGCCAT...TCGTGCAGGAGGGCACGGTGGGTGAGCCATTCTCGCCATTCTCATGTCAGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR GCA 90 bp CCAGTGCAGCAGGACTGCCGCTGGGTCCTGCCCCGAGTGCCAAGGGTCGCTCTAGCTGGAGCCAGCCTTTaGCAGCGTAATTCTTGTCTT +
Preference number: 2 (lower is better)
Translates to: PVQQDCRWVLPRVPRVALAGASL*QRNSCL
Trigger: AAGACAAGAATTACGCTGGCAAAGGCTGGCTCCAGC...TAGAGCGACCCTTGGCACTCGGGGCAGGACCCAGCGGCAGTCCTGCTGCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR TCA 90 bp CTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACATCCTGCCAGCCCCTGTaGCCGCCAGACCCCATGCAG +
Preference number: 2 (lower is better)
Translates to: LAYRPMTSYQPAYTTDGTSCQPL*PPDPMQ
Trigger: CTGCATGGGGTCTGGCGGTCACAGGGGCTGGCAGGA...TGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000634032.1
3UTR-3UTR CCA 90 bp CGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTCCCATCAGCAGTGCTaGAGCCAGCCTTTGCCAGCG +
Preference number: 2 (lower is better)
Translates to: RKRVCTAGPSLDRSGGEASHQQC*SQPLPA
Trigger: CGCTGGCAAAGGCTGGCTCCAGCACTGCTGATGGGA...AGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000634032.1
3UTR-3UTR CCA 90 bp CATGGCCTTGCACCTGCATGTGGCTGTCTAGATCCCCAGGAATGTATTGGACCTCAGCAGGACTGCCGCTaGGTCCTGCCCCGAGTGCCA +
Preference number: 2 (lower is better)
Translates to: HGLAPACGCLDPQECIGPQQDCR*VLPRVP
Trigger: TGGCACTCGGGGCAGGACCCAGCGGCAGTCCTGCTG...AGGTCCAATACATTCCTGGGGATCTAGACAGCCACATGCAGGTGCAAGGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR GCA 90 bp GGTCCTGCCCCGAGTGCCAAGGGTCGCTCTACCCCAGTAACCACGATAGAATGCTCCCAGACTGATGGCTaGCATTCGAGGGAAGACACC +
Preference number: 2 (lower is better)
Translates to: GPAPSAKGRSTPVTTIECSQTDG*HSREDT
Trigger: GGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGA...GCATTCTATCGTGGTTACTGGGGTAGAGCGACCCTTGGCACTCGGGGCAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR GCA 90 bp CCAAGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCAAGCGGCAAATCCACCTaGAAAAGCTCCACAGACTGC +
Preference number: 2 (lower is better)
Translates to: PSAPNGPEPGGSDQEHSPSGKST*KSSTDC
Trigger: GCAGTCTGTGGAGCTTTTGCAGGTGGATTTGCCGCT...TGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CCA 90 bp AGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACATGGCTGCGAGGAAGCTTaGGTTCAAGCGTCACTCATC +
Preference number: 2 (lower is better)
Translates to: SAPNGPEPGGSDQEHSPHGCEEA*VQASLI
Trigger: GATGAGTGACGCTTGAACCCAAGCTTCCTCGCAGCC...ATGTGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CCA 90 bp AGACTGATGGCTGCCATTCGAGGGAAGACACCTGCAAATAATCCTGCCAGCCCCTCCCATCAGCAGTGCTaGAGCCAGCCTTTGCCAGCG +
Preference number: 2 (lower is better)
Translates to: RLMAAIRGKTPANNPASPSHQQC*SQPLPA
Trigger: CGCTGGCAAAGGCTGGCTCCAGCACTGCTGATGGGA...GGGGCTGGCAGGATTATTTGCAGGTGTCTTCCCTCGAATGGCAGCCATCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000634032.1
3UTR-3UTR TCA 90 bp TCCTGGACTTTAGCAAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTGCACGTCTAGAGGGGTGGTaGCTGCAGCGGCAAATCCAC +
Preference number: 2 (lower is better)
Translates to: SWTLARLYHPDSTELQPARLEGW*LQRQIH
Trigger: GTGGATTTGCCGCTGCAGTCACCACCCCTCTAGACG...TGCAGGCTGTAGCTCTGTGGAGTCCGGGTGATACAACCTTGCTAAAGTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR TCA 90 bp CATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCCGTCTAGAGGGGTGGTaGCTGCAGCGGCAAATCCAC +
Preference number: 2 (lower is better)
Translates to: HTSQPIPRMAQSPCRYLSRLEGW*LQRQIH
Trigger: GTGGATTTGCCGCTGCAGTCACCACCCCTCTAGACG...GCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000634032.1
3UTR-3UTR GCA 90 bp CCAAGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACACTTGAGTTGCAGCTaGTTTCTCTCACACACCACA +
Preference number: 2 (lower is better)
Translates to: PSAPNGPEPGGSDQEHSPHLSCS*FLSHTT
Trigger: TGTGGTGTGTGAGAGAAAGCAGCTGCAACTCAAGTG...TGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CCA 90 bp GCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTAGCCTATACCACGGATaGCACAATCTCCATGCCGGT +
Preference number: 2 (lower is better)
Translates to: AQRKRVCTAGPSLDRSGGSLYHG*HNLHAG
Trigger: ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT...ACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR CAA 90 bp AGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTaGACAGAAGTGGAGGTGAGGCTTGTCTCTGCTTCAAGGACTCTT +
Preference number: 2 (lower is better)
Translates to: RQLLSGRGFALQAPL*TEVEVRLVSASRTL
Trigger: AAGAGTCCTTGAAGCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
3UTR-3UTR TCA 90 bp CAGTCTGACATGAGAATGGCGAGAATGGCTCACCCACCGTGCCCTCCTGCACGAGCCCTCCTTTCAGTCTaGCATGAGAATGGCGAGAAT +
Preference number: 2 (lower is better)
Translates to: QSDMRMARMAHPPCPPARALLSV*HENGEN
Trigger: ATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGC...TCGTGCAGGAGGGCACGGTGGGTGAGCCATTCTCGCCATTCTCATGTCAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR GCA 90 bp TCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACCAGCGGAAGAGGGTTTaGACTGCAGGCCCCTCTCTT +
Preference number: 2 (lower is better)
Translates to: SGIQANDFIPASLYHGWHQRKRV*TAGPSL
Trigger: AAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG...GTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR GCA 90 bp GCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCCAGCGGAAGAGGGTTTaGACTGCAGGCCCCTCTCTT +
Preference number: 2 (lower is better)
Translates to: AGILAQLVFSTGAYSSDSQRKRV*TAGPSL
Trigger: AAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG...GCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR GCA 90 bp TCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGGGTTCAAGCGTCACATTCCCATCAGCAGTaGTGGAGCCAGCCTTTGCCA +
Preference number: 2 (lower is better)
Translates to: STGKRGRRGCEEAWVQASHSHQQ*WSQPLP
Trigger: TGGCAAAGGCTGGCTCCAGCACTGCTGATGGGAATG...TGACGCTTGAACCCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR GCA 90 bp GTTGTAGTCATGTGCCCTGGGGCTAGGGCTTCTCCTGCTCGGCAAACTAGATCAAGGTGGGTTGGGAGCTaGTTAAACGGTCAAGTGGGG +
Preference number: 2 (lower is better)
Translates to: VVVMCPGARASPARQTRSRWVGS*LNGQVG
Trigger: CCCCACTTGACCGTTTAAGCAGCTCCCAACCCACCT...TGATCTAGTTTGCCGAGCAGGAGAAGCCCTAGCCCCAGGGCACATGACTACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CCA 90 bp CTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCGACCAGAGGGCAACTTaGGACTTCTTTAGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: LGPIVQTAAQRKRVCTAGDQRAT*DFFSCS
Trigger: AGAGCAGCTAAAGAAGTCCCAAGTTGCCCTCTGGTC...GCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CCA 90 bp AATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTTCCCATCAGCAGTGCTaGAGCCAGCCTTTGCCAGCG +
Preference number: 2 (lower is better)
Translates to: NDFIPASLYHGWHNLHAGSHQQC*SQPLPA
Trigger: CGCTGGCAAAGGCTGGCTCCAGCACTGCTGATGGGA...ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000634032.1
3UTR-3UTR CCA 90 bp AGCTCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATTCCCATCAGCAGTGCTaGAGCCAGCCTTTGCCAGCG +
Preference number: 2 (lower is better)
Translates to: SSLAYRPMTSYQPAYTTDSHQQC*SQPLPA
Trigger: CGCTGGCAAAGGCTGGCTCCAGCACTGCTGATGGGA...ATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000634032.1
3UTR CAA 90 bp TCTTCATTAACTTCAGGCAGTCCAGAGCGCGCGGAAGCCCAGTACTaGCTTGTTTCCAATGGCCACCTCCCCAAAGCATGTGACGCCAGT +
Preference number: 2 (lower is better)
Translates to: SSLTSGSPERAEAQY*LVSNGHLPKACDAS
Trigger: ACTGGCGTCACATGCTTTGGGGAGGTGGCCATTGGAAACAAGCAAGTACTGGGCTTCCGCGCGCTCTGGACTGCCTGAAGTTAATGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CAA 90 bp TTAGATGAGGTCAGATGTCCATGGTGCAACTCTTACGGCATCTGGTaGGTGGGGCTGAGGATGCACAGGGACCTCAAGCTCTGGTTCCTG +
Preference number: 2 (lower is better)
Translates to: LDEVRCPWCNSYGIW*VGLRMHRDLKLWFL
Trigger: CAGGAACCAGAGCTTGAGGTCCCTGTGCATCCTCAGCCCCACCAACCAGATGCCGTAAGAGTTGCACCATGGACATCTGACCTCATCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR GCA 90 bp AGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCCAGCGGAAGAGGGTTTaGACTGCAGGCCCCTCTCTT +
Preference number: 2 (lower is better)
Translates to: SLYHGWHNLHAGILAQLVQRKRV*TAGPSL
Trigger: AAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG...GACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR GCA 90 bp GCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCCAGCGGAAGAGGGTTTaGACTGCAGGCCCCTCTCTT +
Preference number: 2 (lower is better)
Translates to: AYRPMTSYQPAYTTDGTIQRKRV*TAGPSL
Trigger: AAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG...GATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR GCA 90 bp CGAGAATGGCTCACCCACCGTGCCCTCCTGCACGAAGCCAGCTGGGCCCACCTAAAAGAGTGCTTGCTATaGACCTGTAGTTCAATCTTT +
Preference number: 2 (lower is better)
Translates to: REWLTHRALLHEASWAHLKECLL*TCSSIF
Trigger: AAAGATTGAACTACAGGTGCATAGCAAGCACTCTTT...TAGGTGGGCCCAGCTGGCTTCGTGCAGGAGGGCACGGTGGGTGAGCCATTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR GCA 90 bp CATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCTCCCAGACTGATGGCTaGCATTCGAGGGAAGACACC +
Preference number: 2 (lower is better)
Translates to: HTSQPIPRMAQSPCRYLSSQTDG*HSREDT
Trigger: GGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGA...GCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
3UTR-3UTR GCA 90 bp AGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACATCACAGAGCTACAGCCTaGATCTTCATTAACTTCAGG +
Preference number: 2 (lower is better)
Translates to: SAPNGPEPGGSDQEHSPHHRATA*IFINFR
Trigger: CCTGAAGTTAATGAAGATGCAGGCTGTAGCTCTGTG...ATGTGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR GCA 90 bp CATGGCCTTGCACCTGCATGTGGCTGTCTAGATCCCCAGGAATGTATTGGACCTGTCCCCTCAGACAGCTaGGCTGTTGAACAGTGGCTA +
Preference number: 2 (lower is better)
Translates to: HGLAPACGCLDPQECIGPVPSDS*AVEQWL
Trigger: TAGCCACTGTTCAACAGCGCAGCTGTCTGAGGGGAC...AGGTCCAATACATTCCTGGGGATCTAGACAGCCACATGCAGGTGCAAGGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR TCA 90 bp TCCTTTCAGTCTGACATGAGAATGGCGAGAATGGCTCACCCACCGTGCCCTCCTGCCCTCCTTTCAGTCTaGCATGAGAATGGCGAGAAT +
Preference number: 2 (lower is better)
Translates to: SFQSDMRMARMAHPPCPPALLSV*HENGEN
Trigger: ATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGC...AGGAGGGCACGGTGGGTGAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR GCA 90 bp TGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCCAGCGGAAGAGGGTTTaGACTGCAGGCCCCTCTCTT +
Preference number: 2 (lower is better)
Translates to: CLCFKDSFCQLPTASCAFQRKRV*TAGPSL
Trigger: AAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG...GAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
3UTR-3UTR GCA 90 bp GCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCCAGACTGATGGCTaGCATTCGAGGGAAGACACC +
Preference number: 2 (lower is better)
Translates to: AYRPMTSYQPAYTTDGTISQTDG*HSREDT
Trigger: GGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGA...GATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
3UTR-3UTR GCA 90 bp GCTTGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTCCCAGACTGATGGCTaGCATTCGAGGGAAGACACC +
Preference number: 2 (lower is better)
Translates to: ACLCFKDSFCQLPTASCASQTDG*HSREDT
Trigger: GGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGA...CGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
3UTR-3UTR CCA 90 bp TCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCAGCCTATACCACGGATaGCACAATCTCCATGCCGGT +
Preference number: 2 (lower is better)
Translates to: SEYRHRPRFLLLALWHTGSLYHG*HNLHAG
Trigger: ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT...GCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR CCA 90 bp CGGGTCGTATGCAGTGACTGCAACACCGAAGTGGACTGTTACTCCAGGGGACAAGACCAGAGGGCAACTTaGGACTTCTTTAGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: RVVCSDCNTEVDCYSRGQDQRAT*DFFSCS
Trigger: AGAGCAGCTAAAGAAGTCCCAAGTTGCCCTCTGGTC...TTGTCCCCTGGAGTAACAGTCCACTTCGGTGTTGCAGTCACTGCATACGACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CCA 90 bp CCACTGTCTCCTATCCTTTACCGACGGCTTGTGTGTTTGTGTTGGGGTGTGCCAACTGCAACACCGAAGTaGACTGTTACTCCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: PLSPILYRRLVCLCWGVPTATPK*TVTPGD
Trigger: GTCCCCTGGAGTAACAGTCCACTTCGGTGTTGCAGT...TGGCACACCCCAACACAAACACACAAGCCGTCGGTAAAGGATAGGAGACAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR TCA 90 bp TACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCTGGCATACAGGCCAATaGCTTCATACCAGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: YHGWHNLHAGILAQLVFSWHTGQ*LHTSQP
Trigger: AGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCA...GCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR TCA 90 bp TTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGTGGCATACAGGCCAATaGCTTCATACCAGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: FRVPPQTPFSSLSSLAYRWHTGQ*LHTSQP
Trigger: AGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCA...CCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR GCA 90 bp AGCTGGCCCAGGCCCTCCTTTCAGTCTGACATGAGAATGGCGAGAATGGCTCACCCCAGAAAGAGTGCTTaGTATGCACCTGTAGTTCAA +
Preference number: 2 (lower is better)
Translates to: SWPRPSFQSDMRMARMAHPRKSA*YAPVVQ
Trigger: TTGAACTACAGGTGCATAGCAAGCACTCTTTCTGGG...GTGAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGCCTGGGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR GCA 90 bp CAAAATCACATACTGTTTGTTTGCTCCAGGGCAGACAACACTGCTAGATTCCTGATGGCTCACCCACCGTaGCCTCCTGCACGAAGCCAG +
Preference number: 2 (lower is better)
Translates to: QNHILFVCSRADNTARFLMAHPP*PPARSQ
Trigger: CTGGCTTCGTGCAGGAGGGCACGGTGGGTGAGCCAT...CAGGAATCTAGCAGTGTTGTCTGCCCTGGAGCAAACAAACAGTATGTGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR GCA 90 bp GGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTTTCAAGGACTCTTTCTaGCAACTTCCAACAGCAAGC +
Preference number: 2 (lower is better)
Translates to: GRGFALQAPLLTEVEVRLFKDSF*QLPTAS
Trigger: GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA...AAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
3UTR-3UTR GCA 90 bp GCCTTTGCCAGCGTAATTCTTGTCTTTGCCACGTCTAGAGGGGTGGTGACTGCAGGTGAGGCTTGTCTCTaGTTCAAGGACTCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: AFASVILVFATSRGVVTAGEACL*FKDSFC
Trigger: GCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC...TGCAGTCACCACCCCTCTAGACGTGGCAAAGACAAGAATTACGCTGGCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000634032.1
3UTR-3UTR CCA 90 bp CCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATGCTCAGCACTTGCTTGTTTCCAATaGCCACCTCCCCAAAGCATG +
Preference number: 2 (lower is better)
Translates to: PETTMAMVGKDIRFTCSALACFQ*PPPQSM
Trigger: CATGCTTTGGGGAGGTGGCCATTGGAAACAAGCAAG...TGCTGAGCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CCA 90 bp CCACTGTCTCCTATCCTTTACCGACGGCTTGTGTGTTTGTGTTGGGGTGTGCCAGTTTCAAGGCTACCATaGAGCTGGGGAGGGAAGAAT +
Preference number: 2 (lower is better)
Translates to: PLSPILYRRLVCLCWGVPVSRLP*SWGGKN
Trigger: ATTCTTCCCTCCCCAGCTCCATGGTAGCCTTGAAAC...TGGCACACCCCAACACAAACACACAAGCCGTCGGTAAAGGATAGGAGACAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR GCA 90 bp GTTCTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCCCAGACTGATGGCTaGCATTCGAGGGAAGACACC +
Preference number: 2 (lower is better)
Translates to: VLRKLFRVPPQTPFSSLSSQTDG*HSREDT
Trigger: GGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGA...GCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
3UTR-3UTR GCA 90 bp AGACTGATGGCTGCCATTCGAGGGAAGACACCTGCAAATAATCCTGCCAGCCCCTTCAAGGACTCTTTCTaGCAACTTCCAACAGCAAGC +
Preference number: 2 (lower is better)
Translates to: RLMAAIRGKTPANNPASPFKDSF*QLPTAS
Trigger: GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA...GGGGCTGGCAGGATTATTTGCAGGTGTCTTCCCTCGAATGGCAGCCATCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000634032.1
3UTR-3UTR GCA 90 bp GACTTTAGCAAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTGCATCTTCGGTGAGGCTTGTCTCTaGTTCAAGGACTCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: DFSKVVSPGLHRATACIFGEACL*FKDSFC
Trigger: GCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC...GAAGATGCAGGCTGTAGCTCTGTGGAGTCCGGGTGATACAACCTTGCTAAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CCA 90 bp ATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGAGCCTATACCACGGATaGCACAATCTCCATGCCGGT +
Preference number: 2 (lower is better)
Translates to: IPRMAQSPCRYLSTTGLQSLYHG*HNLHAG
Trigger: ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT...CTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR CCA 90 bp CCACTGTCTCCTATCCTTTACCGACGGCTTGTGTGTTTGTGTTGGGGTGTGCCAGTTGTAACTCCCATGTaGAGTATCAGTCGCTCACAG +
Preference number: 2 (lower is better)
Translates to: PLSPILYRRLVCLCWGVPVVTPM*SISRSQ
Trigger: CTGTGAGCGACTGATACTCCACATGGGAGTTACAAC...TGGCACACCCCAACACAAACACACAAGCCGTCGGTAAAGGATAGGAGACAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CCA 90 bp CCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATGCTCAGCAACTCTAACCCATCTTTaGCGCTGTCCTTCAGAACAC +
Preference number: 2 (lower is better)
Translates to: PETTMAMVGKDIRFTCSATLTHL*RCPSEH
Trigger: GTGTTCTGAAGGACAGCGCCAAAGATGGGTTAGAGT...TGCTGAGCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR GCA 90 bp AATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTTATAGTTCAGACAGCTaGTCAGCGGAAGAGGGTTTG +
Preference number: 2 (lower is better)
Translates to: NDFIPASLYHGWHNLHAGYSSDS*SAEEGL
Trigger: CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA...ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR GCA 90 bp GCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTATAGTTCAGACAGCTaGTCAGCGGAAGAGGGTTTG +
Preference number: 2 (lower is better)
Translates to: AYRPMTSYQPAYTTDGTIYSSDS*SAEEGL
Trigger: CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA...GATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR GCA 90 bp CATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACTATAGTTCAGACAGCTaGTCAGCGGAAGAGGGTTTG +
Preference number: 2 (lower is better)
Translates to: HAGILAQLVFSTGAYSSDYSSDS*SAEEGL
Trigger: CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA...GTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR GCA 90 bp AAGATGAAACCTCCCAGACTGATGGCTGCCATTCGAGGGAAGACACCTGCAAATGGTGAGGCTTGTCTCTaGTTCAAGGACTCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: KMKPPRLMAAIRGKTPANGEACL*FKDSFC
Trigger: GCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC...ATTTGCAGGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGAGGTTTCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
3UTR-3UTR GCA 90 bp ATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCTGGAGCCAGCCTTTaGCAGCGTAATTCTTGTCTT +
Preference number: 2 (lower is better)
Translates to: ILAQLVFSTGAYSSDSCSAGASL*QRNSCL
Trigger: AAGACAAGAATTACGCTGGCAAAGGCTGGCTCCAGC...TGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000634032.1
3UTR-3UTR CCA 90 bp ACCCAGCCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATGCGTAGGGGATTCTTCCTaGACTTTAGCAAGGTTGTAT +
Preference number: 2 (lower is better)
Translates to: TQPETTMAMVGKDIRFTCVGDSS*TLARLY
Trigger: ATACAACCTTGCTAAAGTCCAGGAAGAATCCCCTAC...GCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGGCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CCA 90 bp GTTGTAGTCATGTGCCCTGGGGCTAGGGCTTCTCCTGCTCGGCAAACTAGATCAGTAGGGGATTCTTCCTaGACTTTAGCAAGGTTGTAT +
Preference number: 2 (lower is better)
Translates to: VVVMCPGARASPARQTRSVGDSS*TLARLY
Trigger: ATACAACCTTGCTAAAGTCCAGGAAGAATCCCCTAC...TGATCTAGTTTGCCGAGCAGGAGAAGCCCTAGCCCCAGGGCACATGACTACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CAA 90 bp CACTGCTGTTGGCACCAAAAAGCTAGGTTTTGTCTACCTCAGTTCTaGTCATACCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCG +
Preference number: 2 (lower is better)
Translates to: HCCWHQKARFCLPQF*SYQSLREREVGEAA
Trigger: CGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAAGAACTGAGGTAGACAAAACCTAGCTTTTTGGTGCCAACAGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR TCA 90 bp CATGGCCTTGCACCTGCATGTGGCTGTCTAGATCCCCAGGAATGTATTGGACCTAGACTTCTAATTAGATaGGGTCAGATGTCCATGGTG +
Preference number: 2 (lower is better)
Translates to: HGLAPACGCLDPQECIGPRLLIR*GQMSMV
Trigger: CACCATGGACATCTGACCTCATCTAATTAGAAGTCT...AGGTCCAATACATTCCTGGGGATCTAGACAGCCACATGCAGGTGCAAGGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR GCA 90 bp CTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCTATAGTTCAGACAGCTaGTCAGCGGAAGAGGGTTTG +
Preference number: 2 (lower is better)
Translates to: LYHGWHNLHAGILAQLVFYSSDS*SAEEGL
Trigger: CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA...GAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR GCA 90 bp AAGATGAAACCTCCCAGACTGATGGCTGCCATTCGAGGGAAGACACCTGCAAATTATAGTTCAGACAGCTaGTCAGCGGAAGAGGGTTTG +
Preference number: 2 (lower is better)
Translates to: KMKPPRLMAAIRGKTPANYSSDS*SAEEGL
Trigger: CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA...ATTTGCAGGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGAGGTTTCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
3UTR-3UTR CCA 90 bp CTACACCTGGAGCTTGTTAGTCAAGGTCTAAAATCCCTAAGTGTGGTGACCTTTCTGCCTTTTCAAAGCTaGCCCAGGCCCTCCTTTCAG +
Preference number: 2 (lower is better)
Translates to: LHLELVSQGLKSLSVVTFLPFQS*PRPSFQ
Trigger: CTGAAAGGAGGGCCTGGGCCAGCTTTGAAAAGGCAG...AAAGGTCACCACACTTAGGGATTTTAGACCTTGACTAACAAGCTCCAGGTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR CAA 90 bp GTTCGTTCTTTCCTTGTAGGGGATTCTTCCTGGACTTTAGCAAGGTaGTATCACCCGGACTCCACAGAGCTACAGCCTGCATCTTCATTA +
Preference number: 2 (lower is better)
Translates to: VRSFLVGDSSWTLAR*YHPDSTELQPASSL
Trigger: TAATGAAGATGCAGGCTGTAGCTCTGTGGAGTCCGGGTGATACAACCTTGCTAAAGTCCAGGAAGAATCCCCTACAAGGAAAGAACGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CAA 90 bp ACAACCACTGTCTCCTATCCTTTACCGACGGCTTGTGTGTTTGTGTaGGGGTGTGCCATCACTTCCTATTTGTGTAGACAGTCATGCTCA +
Preference number: 2 (lower is better)
Translates to: TTTVSYPLPTACVFV*GCAITSYLCRQSCS
Trigger: TGAGCATGACTGTCTACACAAATAGGAAGTGATGGCACACCCCAACACAAACACACAAGCCGTCGGTAAAGGATAGGAGACAGTGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR TCA 90 bp TTGCCTTCTGCTGAATCCACCATCAGGTGGCAGGAAATGAAAGATCAGATACAGCCTTTCAGTCTGACATaGGAATGGCGAGAATGGCTC +
Preference number: 2 (lower is better)
Translates to: LPSAESTIRWQEMKDQIQPFSLT*EWREWL
Trigger: GAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGG...CTGTATCTGATCTTTCATTTCCTGCCACCTGATGGTGGATTCAGCAGAAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR GCA 90 bp ATCCACCATCAGGTGGCAGGAAATGAAAGATCAGATACAGATCAAATGAAAGCTGACCGCCAGACCCCATaGAGGACAGAGAGCACATTC +
Preference number: 2 (lower is better)
Translates to: IHHQVAGNERSDTDQMKADRQTP*RTESTF
Trigger: GAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTC...AGCTTTCATTTGATCTGTATCTGATCTTTCATTTCCTGCCACCTGATGGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483224.5
ENST00000632740.1
3UTR-3UTR CCA 90 bp TTGCCTTCTGCTGAATCCACCATCAGGTGGCAGGAAATGAAAGATCAGATACAGCACCACAGGGGGCGCTaGACACATCTCTGTAAAATA +
Preference number: 2 (lower is better)
Translates to: LPSAESTIRWQEMKDQIQHHRGR*THLCKI
Trigger: TATTTTACAGAGATGTGTCCAGCGCCCCCTGTGGTG...CTGTATCTGATCTTTCATTTCCTGCCACCTGATGGTGGATTCAGCAGAAGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR TCA 90 bp ACCAAAAAGCTAGGTTTTGTCTACCTCAGTTCTTGTCATACCAATCTCTACGGGGCCCACCTAGTCACTTaGGTTGCAGCTGCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: TKKLGFVYLSSCHTNLYGAHLVT*VAAAFS
Trigger: AGAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGC...CCCGTAGAGATTGGTATGACAAGAACTGAGGTAGACAAAACCTAGCTTTTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR GCA 90 bp ACAGATCAAATGAAAGCTCTAAAAGGCCTGGCCTCAGCATTACCAAACTTATTTGACCGCCAGACCCCATaGAGGACAGAGAGCACATTC +
Preference number: 2 (lower is better)
Translates to: TDQMKALKGLASALPNLFDRQTP*RTESTF
Trigger: GAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTC...AAATAAGTTTGGTAATGCTGAGGCCAGGCCTTTTAGAGCTTTCATTTGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483224.5
ENST00000632740.1
3UTR-3UTR CCA 90 bp AATCTGAGGGTAATTAAAACCAGCAGCCTAGTTACCCAGAAAGAGTGCTTGCTAAGCCTATACCACGGATaGCACAATCTCCATGCCGGT +
Preference number: 2 (lower is better)
Translates to: NLRVIKTSSLVTQKECLLSLYHG*HNLHAG
Trigger: ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT...TAGCAAGCACTCTTTCTGGGTAACTAGGCTGCTGGTTTTAATTACCCTCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR TCA 90 bp AGGTTCATTTATAAATGTCAGTATAGTTGGTGGTCCTTCTTTTACAAACGCAGTCGTCTAGAGGGGTGGTaGCTGCAGCGGCAAATCCAC +
Preference number: 2 (lower is better)
Translates to: RFIYKCQYSWWSFFYKRSRLEGW*LQRQIH
Trigger: GTGGATTTGCCGCTGCAGTCACCACCCCTCTAGACG...ACTGCGTTTGTAAAAGAAGGACCACCAACTATACTGACATTTATAAATGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483224.5
ENST00000632740.1
3UTR CAA 90 bp TGGAAATTGGATATTCCCTTTCTCCTCCCCCAGGATTTGCTGCTGTaGCTGTTTATTGTTACAGCTTGCCTAGTGACTTTTCCTGGACAA +
Preference number: 2 (lower is better)
Translates to: WKLDIPFLLPQDLLL*LFIVTACLVTFPGQ
Trigger: TTGTCCAGGAAAAGTCACTAGGCAAGCTGTAACAATAAACAGCAACAGCAGCAAATCCTGGGGGAGGAGAAAGGGAATATCCAATTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR TCA 90 bp GGTCCTTCTTTTACAAACGCAGTCATTCTGCCTTTAATTATCTTCCCCCAAAAACATCTTGCCTTCTGCTaGATCCACCATCAGGTGGCA +
Preference number: 2 (lower is better)
Translates to: GPSFTNAVILPLIIFPQKHLAFC*IHHQVA
Trigger: TGCCACCTGATGGTGGATTCAGCAGAAGGCAAGATG...TTTTTGGGGGAAGATAATTAAAGGCAGAATGACTGCGTTTGTAAAAGAAGGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR GCA 90 bp AGAAACACCCACATACACAACTCTTCCCCAAGTCTCCTTTTCCCAAACAAACAACCTAGTCACTTGAGTTaGAGCTGCTTTCTCTCACAC +
Preference number: 2 (lower is better)
Translates to: RNTHIHNSSPSLLFPNKQPSHLS*SCFLSH
Trigger: GTGTGAGAGAAAGCAGCTGCAACTCAAGTGACTAGG...TTGTTTGTTTGGGAAAAGGAGACTTGGGGAAGAGTTGTGTATGTGGGTGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR CCA 90 bp GGTCCTTCTTTTACAAACGCAGTCATTCTGCCTTTAATTATCTTCCCCCAAAAAAGCCTATACCACGGATaGCACAATCTCCATGCCGGT +
Preference number: 2 (lower is better)
Translates to: GPSFTNAVILPLIIFPQKSLYHG*HNLHAG
Trigger: ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT...TTTTTGGGGGAAGATAATTAAAGGCAGAATGACTGCGTTTGTAAAAGAAGGACC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR CCA 90 bp CAAAATCACATACTGTTTGTTTGCTCCAGGGCAGACAACACTGCTAGATTCCTGGAATCCACCATCAGGTaGCAGGAAATGAAAGATCAG +
Preference number: 2 (lower is better)
Translates to: QNHILFVCSRADNTARFLESTIR*QEMKDQ
Trigger: CTGATCTTTCATTTCCTGCCACCTGATGGTGGATTC...CAGGAATCTAGCAGTGTTGTCTGCCCTGGAGCAAACAAACAGTATGTGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR TCA 90 bp ATAAATGTCAGTATAGTTGGTGGTCCTTCTTTTACAAACGCAGTCATTCTGCCTGCCCTCCTTTCAGTCTaGCATGAGAATGGCGAGAAT +
Preference number: 2 (lower is better)
Translates to: INVSIVGGPSFTNAVILPALLSV*HENGEN
Trigger: ATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGC...AGGCAGAATGACTGCGTTTGTAAAAGAAGGACCACCAACTATACTGACATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR GCA 90 bp TTGCCTTCTGCTGAATCCACCATCAGGTGGCAGGAAATGAAAGATCAGATACAGAAAGAGTGCTTGCTATaGACCTGTAGTTCAATCTTT +
Preference number: 2 (lower is better)
Translates to: LPSAESTIRWQEMKDQIQKECLL*TCSSIF
Trigger: AAAGATTGAACTACAGGTGCATAGCAAGCACTCTTT...CTGTATCTGATCTTTCATTTCCTGCCACCTGATGGTGGATTCAGCAGAAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR CCA 90 bp GTTTGCTCCAGGGCAGACAACACTGCTAGATTCCTGACATTTTGTTTTGAATTTGAATCCACCATCAGGTaGCAGGAAATGAAAGATCAG +
Preference number: 2 (lower is better)
Translates to: VCSRADNTARFLTFCFEFESTIR*QEMKDQ
Trigger: CTGATCTTTCATTTCCTGCCACCTGATGGTGGATTC...AAATTCAAAACAAAATGTCAGGAATCTAGCAGTGTTGTCTGCCCTGGAGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR CCA 90 bp CAAAATCACATACTGTTTGTTTGCTCCAGGGCAGACAACACTGCTAGATTCCTGTGTCAGTATAGTTGGTaGTCCTTCTTTTACAAACGC +
Preference number: 2 (lower is better)
Translates to: QNHILFVCSRADNTARFLCQYSW*SFFYKR
Trigger: GCGTTTGTAAAAGAAGGACCACCAACTATACTGACA...CAGGAATCTAGCAGTGTTGTCTGCCCTGGAGCAAACAAACAGTATGTGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR GCA 90 bp GGTCCTTCTTTTACAAACGCAGTCATTCTGCCTTTAATTATCTTCCCCCAAAAACCCAGAAAGAGTGCTTaGTATGCACCTGTAGTTCAA +
Preference number: 2 (lower is better)
Translates to: GPSFTNAVILPLIIFPQKPRKSA*YAPVVQ
Trigger: TTGAACTACAGGTGCATAGCAAGCACTCTTTCTGGG...TTTTTGGGGGAAGATAATTAAAGGCAGAATGACTGCGTTTGTAAAAGAAGGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR GCA 90 bp ATAAATGTCAGTATAGTTGGTGGTCCTTCTTTTACAAACGCAGTCATTCTGCCTGTTACCCAGAAAGAGTaGTTGCTATGCACCTGTAGT +
Preference number: 2 (lower is better)
Translates to: INVSIVGGPSFTNAVILPVTQKE*LLCTCS
Trigger: ACTACAGGTGCATAGCAAGCACTCTTTCTGGGTAAC...AGGCAGAATGACTGCGTTTGTAAAAGAAGGACCACCAACTATACTGACATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR GCA 90 bp ACAGATCAAATGAAAGCTCTAAAAGGCCTGGCCTCAGCATTACCAAACTTATTTTTCAAGGACTCTTTCTaGCAACTTCCAACAGCAAGC +
Preference number: 2 (lower is better)
Translates to: TDQMKALKGLASALPNLFFKDSF*QLPTAS
Trigger: GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA...AAATAAGTTTGGTAATGCTGAGGCCAGGCCTTTTAGAGCTTTCATTTGATCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483224.5
ENST00000632740.1
3UTR-3UTR GCA 90 bp AGGTTCATTTATAAATGTCAGTATAGTTGGTGGTCCTTCTTTTACAAACGCAGTCCTAGTCACTTGAGTTaGAGCTGCTTTCTCTCACAC +
Preference number: 2 (lower is better)
Translates to: RFIYKCQYSWWSFFYKRSPSHLS*SCFLSH
Trigger: GTGTGAGAGAAAGCAGCTGCAACTCAAGTGACTAGG...ACTGCGTTTGTAAAAGAAGGACCACCAACTATACTGACATTTATAAATGAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR GCA 72 bp CCACATCACCAGTGCAGCAGGACTGCCGCTGGGTCCTaGCCCGAGTGCCAAGGGTCGCTCTACCCCAGTAAC +
Preference number: 3 (lower is better)
Translates to: PHHQCSRTAAGS*PECQGSLYPSN
Trigger: GTTACTGGGGTAGAGCGACCCTTGGCACTCGGGGCAGGACCCAGCGGCAGTCCTGCTGCACTGGTGATGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CCA 72 bp GCATTCTCCACATCACCAGTGCAGCAGGACTGCCGCTaGGTCCTGCCCCGAGTGCCAAGGGTCGCTCTACCC +
Preference number: 3 (lower is better)
Translates to: AFSTSPVQQDCR*VLPRVPRVALP
Trigger: GGGTAGAGCGACCCTTGGCACTCGGGGCAGGACCCAGCGGCAGTCCTGCTGCACTGGTGATGTGGAGAATGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 72 bp CCAAAGCATGTGACGCCAGTCCCGAGTCCACGCCACTaGCAGGACAGCTCCCCGGGAAACAGAGGGTGCCAC +
Preference number: 3 (lower is better)
Translates to: PKHVTPVPSPRH*QDSSPGNRGCH
Trigger: GTGGCACCCTCTGTTTCCCGGGGAGCTGTCCTGTCAGTGGCGTGGACTCGGGACTGGCGTCACATGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 72 bp CAGTGCAGCAGGACTGCCGCTGGGTCCTGCCCCGAGTaGCAAGGGTCGCTCTACCCCAGTAACCACGATAGA +
Preference number: 3 (lower is better)
Translates to: QCSRTAAGSCPE*QGSLYPSNHDR
Trigger: TCTATCGTGGTTACTGGGGTAGAGCGACCCTTGGCACTCGGGGCAGGACCCAGCGGCAGTCCTGCTGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 72 bp AGCCAGCTGGGCCCACCTAGTCACTTGAGTTGCAGCTaGTTTCTCTCACACACCACAGGGGGCGCTGGACAC +
Preference number: 3 (lower is better)
Translates to: SQLGPPSHLSCS*FLSHTTGGAGH
Trigger: GTGTCCAGCGCCCCCTGTGGTGTGTGAGAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGCCCAGCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
3UTR GCA 72 bp GCACGAAGCCAGCTGGGCCCACCTAGTCACTTGAGTTaGAGCTGCTTTCTCTCACACACCACAGGGGGCGCT +
Preference number: 3 (lower is better)
Translates to: ARSQLGPPSHLS*SCFLSHTTGGA
Trigger: AGCGCCCCCTGTGGTGTGTGAGAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGCCCAGCTGGCTTCGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
3UTR GCA 72 bp GGGGAGCCCATTCTGACCCTTGAGTGGTTGCTAGGCTaGTGGGTTTCAAGGCTACCATGGAGCTGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: GEPILTLEWLLG*WVSRLPWSWGG
Trigger: CCCTCCCCAGCTCCATGGTAGCCTTGAAACCCAGCAGCCTAGCAACCACTCAAGGGTCAGAATGGGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CCA 72 bp GTGGCCGGGTCGTATGCAGTGACTGCAACACCGAAGTaGACTGTTACTCCAGGGGACAAGCCTTCCACCCCC +
Preference number: 3 (lower is better)
Translates to: VAGSYAVTATPK*TVTPGDKPSTP
Trigger: GGGGGTGGAAGGCTTGTCCCCTGGAGTAACAGTCCACTTCGGTGTTGCAGTCACTGCATACGACCCGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 72 bp TTACATGCTCAGCAGCCAGCAGCAGCAGCTCCCCCATaGCCTTTGCCTTGCACAGTGGAGCTGAGCAGCCTG +
Preference number: 3 (lower is better)
Translates to: LHAQQPAAAAPP*PLPCTVELSSL
Trigger: CAGGCTGCTCAGCTCCACTGTGCAAGGCAAAGGTCATGGGGGAGCTGCTGCTGCTGGCTGCTGAGCATGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 72 bp CTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTaGTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTC +
Preference number: 3 (lower is better)
Translates to: LVFSTGAYSSDS*SAEEGLHCRPL
Trigger: GAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR GCA 72 bp ACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATaGTCAGCAGCCAGCAGCAGCAGCTCCCCCATGACC +
Preference number: 3 (lower is better)
Translates to: TMAMVGKDIRFT*SAASSSSSPMT
Trigger: GGTCATGGGGGAGCTGCTGCTGCTGGCTGCTGAGCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CAA 90 bp CGAGAATGGCTCACCCACCGTGCCCTCCTGCACGAAGCCAGCTGGGCCCACCTAACCCAGAAAGAGTGCTaGCTATGCACCTGTAGTTCA +
Preference number: 3 (lower is better)
Translates to: REWLTHRALLHEASWAHLTQKEC*LCTCSS
Trigger: TGAACTACAGGTGCATAGCAAGCACTCTTTCTGGGT...TAGGTGGGCCCAGCTGGCTTCGTGCAGGAGGGCACGGTGGGTGAGCCATTCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR CAA 90 bp GGTCCTGCCCCGAGTGCCAAGGGTCGCTCTACCCCAGTAACCACGATAGAATGCGGCCCACCTAGTCACTaGAGTTGCAGCTGCTTTCTC +
Preference number: 3 (lower is better)
Translates to: GPAPSAKGRSTPVTTIECGPPSH*SCSCFL
Trigger: GAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGCC...GCATTCTATCGTGGTTACTGGGGTAGAGCGACCCTTGGCACTCGGGGCAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CAA 90 bp CACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGCTGCAGGCCCCTCTCTaGACAGAAGTGGAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: HNWSSALGPIVQTAAQRKLQAPL*TEVEVR
Trigger: CCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAG...CTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR CAA 90 bp GTTGTAGTCATGTGCCCTGGGGCTAGGGCTTCTCCTGCTCGGCAAACTAGATCAAGTCGCTCACAGGACTaGGATCGTGCCCTCCTGCAC +
Preference number: 3 (lower is better)
Translates to: VVVMCPGARASPARQTRSSRSQD*DRALLH
Trigger: GTGCAGGAGGGCACGATCCAAGTCCTGTGAGCGACT...TGATCTAGTTTGCCGAGCAGGAGAAGCCCTAGCCCCAGGGCACATGACTACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 72 bp TTCAAAGCTGGCCCAGGCCCTCCTTTCAGTCTGACATaGGAATGGCGAGAATGGCTCACCCACCGTGCCCTC +
Preference number: 3 (lower is better)
Translates to: FKAGPGPPFSLT*EWREWLTHRAL
Trigger: GAGGGCACGGTGGGTGAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGCCTGGGCCAGCTTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR TCA 72 bp CTTGCTTGTTTCCAATGGCCACCTCCCCAAAGCATGTaGCGCCAGTCCCGAGTCCACGCCACTGACAGGACA +
Preference number: 3 (lower is better)
Translates to: LACFQWPPPQSM*RQSRVHATDRT
Trigger: TGTCCTGTCAGTGGCGTGGACTCGGGACTGGCGTCACATGCTTTGGGGAGGTGGCCATTGGAAACAAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 72 bp CTGTCCTTCAGAACACGGTGGCCGGGTCGTATGCAGTaGCTGCAACACCGAAGTGGACTGTTACTCCAGGGG +
Preference number: 3 (lower is better)
Translates to: LSFRTRWPGRMQ*LQHRSGLLLQG
Trigger: CCCCTGGAGTAACAGTCCACTTCGGTGTTGCAGTCACTGCATACGACCCGGCCACCGTGTTCTGAAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 72 bp CATGGTGCAACTCTTACGGCATCTGGTTGGTGGGGCTaGGGATGCACAGGGACCTCAAGCTCTGGTTCCTGC +
Preference number: 3 (lower is better)
Translates to: HGATLTASGWWG*GCTGTSSSGSC
Trigger: GCAGGAACCAGAGCTTGAGGTCCCTGTGCATCCTCAGCCCCACCAACCAGATGCCGTAAGAGTTGCACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 72 bp TGGCGCTGTCCTTCAGAACACGGTGGCCGGGTCGTATaGAGTGACTGCAACACCGAAGTGGACTGTTACTCC +
Preference number: 3 (lower is better)
Translates to: WRCPSEHGGRVV*SDCNTEVDCYS
Trigger: GGAGTAACAGTCCACTTCGGTGTTGCAGTCACTGCATACGACCCGGCCACCGTGTTCTGAAGGACAGCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 72 bp ACCCCCTCACGTCTTTCCTGGGTGTGCACATGGCCTTaGACCTGCATGTGGCTGTCTAGATCCCCAGGAATG +
Preference number: 3 (lower is better)
Translates to: TPSRLSWVCTWP*TCMWLSRSPGM
Trigger: CATTCCTGGGGATCTAGACAGCCACATGCAGGTGCAAGGCCATGTGCACACCCAGGAAAGACGTGAGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CCA 72 bp ATGAGGACCCCCTCACGTCTTTCCTGGGTGTGCACATaGCCTTGCACCTGCATGTGGCTGTCTAGATCCCCA +
Preference number: 3 (lower is better)
Translates to: MRTPSRLSWVCT*PCTCMWLSRSP
Trigger: TGGGGATCTAGACAGCCACATGCAGGTGCAAGGCCATGTGCACACCCAGGAAAGACGTGAGGGGGTCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CAA 90 bp TCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCCTGCAGGCCCCTCTCTaGACAGAAGTGGAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: SEYRHRPRFLLLALWHTGLQAPL*TEVEVR
Trigger: CCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAG...GCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR CAA 90 bp TCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCTCAGCGGAAGAGGGTTaGCACTGCAGGCCCCTCTCT +
Preference number: 3 (lower is better)
Translates to: SLAYRPMTSYQPAYTTDGSAEEG*HCRPLS
Trigger: AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGA...GCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR CAA 90 bp TCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCTCAGCGGAAGAGGGTTaGCACTGCAGGCCCCTCTCT +
Preference number: 3 (lower is better)
Translates to: SEYRHRPRFLLLALWHTGSAEEG*HCRPLS
Trigger: AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGA...GCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR CAA 90 bp AGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACATGAGGTTCTGAGGAAATaGTTCAGAGTACCGCCACAG +
Preference number: 3 (lower is better)
Translates to: SAPNGPEPGGSDQEHSPHEVLRK*FRVPPQ
Trigger: CTGTGGCGGTACTCTGAACAATTTCCTCAGAACCTC...ATGTGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CAA 90 bp CCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATGCTCAGCAAGTCGCTCACAGGACTaGGATCGTGCCCTCCTGCAC +
Preference number: 3 (lower is better)
Translates to: PETTMAMVGKDIRFTCSASRSQD*DRALLH
Trigger: GTGCAGGAGGGCACGATCCAAGTCCTGTGAGCGACT...TGCTGAGCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 72 bp GCCTTTTCAAAGCTGGCCCAGGCCCTCCTTTCAGTCTaGCATGAGAATGGCGAGAATGGCTCACCCACCGTG +
Preference number: 3 (lower is better)
Translates to: AFSKLAQALLSV*HENGENGSPTV
Trigger: CACGGTGGGTGAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGCCTGGGCCAGCTTTGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR GCA 72 bp CCTTCAGAACACGGTGGCCGGGTCGTATGCAGTGACTaGAACACCGAAGTGGACTGTTACTCCAGGGGACAA +
Preference number: 3 (lower is better)
Translates to: PSEHGGRVVCSD*NTEVDCYSRGQ
Trigger: TTGTCCCCTGGAGTAACAGTCCACTTCGGTGTTGCAGTCACTGCATACGACCCGGCCACCGTGTTCTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CCA 72 bp ACGAAGACTCCCACAGCAGTGACTCTAACCCATCTTTaGCGCTGTCCTTCAGAACACGGTGGCCGGGTCGTA +
Preference number: 3 (lower is better)
Translates to: TKTPTAVTLTHL*RCPSEHGGRVV
Trigger: TACGACCCGGCCACCGTGTTCTGAAGGACAGCGCCAAAGATGGGTTAGAGTCACTGCTGTGGGAGTCTTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CCA 72 bp GAGGTCAGATGTCCATGGTGCAACTCTTACGGCATCTaGTTGGTGGGGCTGAGGATGCACAGGGACCTCAAG +
Preference number: 3 (lower is better)
Translates to: EVRCPWCNSYGI*LVGLRMHRDLK
Trigger: CTTGAGGTCCCTGTGCATCCTCAGCCCCACCAACCAGATGCCGTAAGAGTTGCACCATGGACATCTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CAA 90 bp AGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCCTGCAGGCCCCTCTCTaGACAGAAGTGGAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: SLYHGWHNLHAGILAQLVLQAPL*TEVEVR
Trigger: CCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAG...GACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR CAA 90 bp CATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACCTGCAGGCCCCTCTCTaGACAGAAGTGGAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: HAGILAQLVFSTGAYSSDLQAPL*TEVEVR
Trigger: CCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAG...GTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR CAA 90 bp AATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTTCAGCGGAAGAGGGTTaGCACTGCAGGCCCCTCTCT +
Preference number: 3 (lower is better)
Translates to: NDFIPASLYHGWHNLHAGSAEEG*HCRPLS
Trigger: AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGA...ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR CAA 90 bp CTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCATCAGCGGAAGAGGGTTaGCACTGCAGGCCCCTCTCT +
Preference number: 3 (lower is better)
Translates to: LLQGLFLPTSNSKLCVRSSAEEG*HCRPLS
Trigger: AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGA...TGACCGAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
3UTR-3UTR CAA 90 bp TACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCTCAGCGGAAGAGGGTTaGCACTGCAGGCCCCTCTCT +
Preference number: 3 (lower is better)
Translates to: YHGWHNLHAGILAQLVFSSAEEG*HCRPLS
Trigger: AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGA...GCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR CAA 90 bp GCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCATAAGCCCCCAGAAAGATGAATCAGCGGAAGAGGGTTaGCACTGCAGGCCCCTCTCT +
Preference number: 3 (lower is better)
Translates to: ANFQQQAVRSVISPQKDESAEEG*HCRPLS
Trigger: AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGA...TTCATCTTTCTGGGGGCTTATGACCGAACGCACAGCTTGCTGTTGGAAGTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
3UTR GCA 72 bp CCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTaGACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: PIVQTAAQRKRV*TAGPSLDRSGG
Trigger: ACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR CCA 72 bp GAGTGGTTGCTAGGCTGCTGGGTTTCAAGGCTACCATaGAGCTGGGGAGGGAAGAATGGGGCTTTGGATAAG +
Preference number: 3 (lower is better)
Translates to: EWLLGCWVSRLP*SWGGKNGALDK
Trigger: CTTATCCAAAGCCCCATTCTTCCCTCCCCAGCTCCATGGTAGCCTTGAAACCCAGCAGCCTAGCAACCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CAA 90 bp ATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGTCAGCGGAAGAGGGTTaGCACTGCAGGCCCCTCTCT +
Preference number: 3 (lower is better)
Translates to: IPRMAQSPCRYLSTTGLQSAEEG*HCRPLS
Trigger: AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGA...CTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR CAA 90 bp TCCTGGACTTTAGCAAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTGCAGCGGAAGCCCAGTACTaGCTTGTTTCCAATGGCCAC +
Preference number: 3 (lower is better)
Translates to: SWTLARLYHPDSTELQPAAEAQY*LVSNGH
Trigger: GTGGCCATTGGAAACAAGCAAGTACTGGGCTTCCGC...TGCAGGCTGTAGCTCTGTGGAGTCCGGGTGATACAACCTTGCTAAAGTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 72 bp AAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTaGATCTTCATTAACTTCAGGCAGTCCAGAGCGCGC +
Preference number: 3 (lower is better)
Translates to: KVVSPGLHRATA*IFINFRQSRAR
Trigger: GCGCGCTCTGGACTGCCTGAAGTTAATGAAGATGCAGGCTGTAGCTCTGTGGAGTCCGGGTGATACAACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 72 bp GCTGTTGAACAGTGGCTACTGATTGTTGTAGTCATGTaGCCTGGGGCTAGGGCTTCTCCTGCTCGGCAAACT +
Preference number: 3 (lower is better)
Translates to: AVEQWLLIVVVM*PGARASPARQT
Trigger: AGTTTGCCGAGCAGGAGAAGCCCTAGCCCCAGGGCACATGACTACAACAATCAGTAGCCACTGTTCAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 72 bp TCACGTCTTTCCTGGGTGTGCACATGGCCTTGCACCTaGATGTGGCTGTCTAGATCCCCAGGAATGTATTGG +
Preference number: 3 (lower is better)
Translates to: SRLSWVCTWPCT*MWLSRSPGMYW
Trigger: CCAATACATTCCTGGGGATCTAGACAGCCACATGCAGGTGCAAGGCCATGTGCACACCCAGGAAAGACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CCA 72 bp AGATCATCACCCAGCCAGAAACCACCATGGCTATGGTaGGCAAGGACATCCGGTTTACATGCTCAGCAGCCA +
Preference number: 3 (lower is better)
Translates to: RSSPSQKPPWLW*ARTSGLHAQQP
Trigger: TGGCTGCTGAGCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGGCTGGGTGATGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CCA 72 bp CACAGATCATCACCCAGCCAGAAACCACCATGGCTATaGTGGGCAAGGACATCCGGTTTACATGCTCAGCAG +
Preference number: 3 (lower is better)
Translates to: HRSSPSQKPPWL*WARTSGLHAQQ
Trigger: CTGCTGAGCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGGCTGGGTGATGATCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CAA 90 bp CTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTTCAGCGGAAGAGGGTTaGCACTGCAGGCCCCTCTCT +
Preference number: 3 (lower is better)
Translates to: LRKLFRVPPQTPFSSLSSSAEEG*HCRPLS
Trigger: AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGA...AGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR TCA 72 bp TGGGTTGGGAGCTGCTTAAACGGTCAAGTGGGGGTCTaGCAGGTTCGTTCTTTCCTTGTAGGGGATTCTTCC +
Preference number: 3 (lower is better)
Translates to: WVGSCLNGQVGV*QVRSFLVGDSS
Trigger: GGAAGAATCCCCTACAAGGAAAGAACGAACCTGTCAGACCCCCACTTGACCGTTTAAGCAGCTCCCAACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 72 bp GTGGGTAAGATCTCTGCAGTCATGACCAGTGGTGCCTaGCTGTTTTGTGTGAAAGTCAGCAGGCAGAGCCAG +
Preference number: 3 (lower is better)
Translates to: VGKISAVMTSGA*LFCVKVSRQSQ
Trigger: CTGGCTCTGCCTGCTGACTTTCACACAAAACAGTCAGGCACCACTGGTCATGACTGCAGAGATCTTACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 72 bp TTGTGTAGACAGTCATGCTCAGCCACAGGTGACAAATaGGGACCCCCTCACGTCTTTCCTGGGTGTGCACAT +
Preference number: 3 (lower is better)
Translates to: LCRQSCSATGDK*GPPHVFPGCAH
Trigger: ATGTGCACACCCAGGAAAGACGTGAGGGGGTCCTCATTTGTCACCTGTGGCTGAGCATGACTGTCTACACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 72 bp GGAGGTGAGGCTTGTCTCTGCTTCAAGGACTCTTTCTaGCAACTTCCAACAGCAAGCTGTGCGTTCGGTCAT +
Preference number: 3 (lower is better)
Translates to: GGEACLCFKDSF*QLPTASCAFGH
Trigger: ATGACCGAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
3UTR CCA 72 bp CTTTCCTGGGTGTGCACATGGCCTTGCACCTGCATGTaGCTGTCTAGATCCCCAGGAATGTATTGGACCTTT +
Preference number: 3 (lower is better)
Translates to: LSWVCTWPCTCM*LSRSPGMYWTF
Trigger: AAAGGTCCAATACATTCCTGGGGATCTAGACAGCCACATGCAGGTGCAAGGCCATGTGCACACCCAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CAA 90 bp TTGCCTTCTGCTGAATCCACCATCAGGTGGCAGGAAATGAAAGATCAGATACAGCTGCAGGCCCCTCTCTaGACAGAAGTGGAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: LPSAESTIRWQEMKDQIQLQAPL*TEVEVR
Trigger: CCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAG...CTGTATCTGATCTTTCATTTCCTGCCACCTGATGGTGGATTCAGCAGAAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR CAA 90 bp CGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTAGAATTATAACCATCTaGCCTTCTGCTGAATCCACC +
Preference number: 3 (lower is better)
Translates to: RKRVCTAGPSLDRSGGEARIITI*PSAEST
Trigger: GGTGGATTCAGCAGAAGGCAAGATGGTTATAATTCT...AGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR-3UTR CAA 90 bp AGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGGAGGTTCTGAGGAAATaGTTCAGAGTACCGCCACAG +
Preference number: 3 (lower is better)
Translates to: RPMTSYQPAYTTDGTISMEVLRK*FRVPPQ
Trigger: CTGTGGCGGTACTCTGAACAATTTCCTCAGAACCTC...CATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR CAA 90 bp TTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGGAGGTTCTGAGGAAATaGTTCAGAGTACCGCCACAG +
Preference number: 3 (lower is better)
Translates to: FRVPPQTPFSSLSSLAYREVLRK*FRVPPQ
Trigger: CTGTGGCGGTACTCTGAACAATTTCCTCAGAACCTC...CCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR GCA 72 bp CCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTaGTTCAAGGACTCTTTCTGCCAACTTCCAACAGCA +
Preference number: 3 (lower is better)
Translates to: PSLDRSGGEACL*FKDSFCQLPTA
Trigger: TGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
3UTR GCA 72 bp CAATGCAAATCCTGTGAATGGGGCTTTCCGTGTTGCTaGCAGATAGGCCACATGGTGTCAGTTCTGAGGATG +
Preference number: 3 (lower is better)
Translates to: QCKSCEWGFPCC*QIGHMVSVLRM
Trigger: CATCCTCAGAACTGACACCATGTGGCCTATCTGGCAGCAACACGGAAAGCCCCATTCACAGGATTTGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 72 bp CTTGTTTGCCCCATGGGTATTGTCCCCTCAGACAGCTaGGCTGTTGAACAGTGGCTACTGATTGTTGTAGTC +
Preference number: 3 (lower is better)
Translates to: LVCPMGIVPSDS*AVEQWLLIVVV
Trigger: GACTACAACAATCAGTAGCCACTGTTCAACAGCGCAGCTGTCTGAGGGGACAATACCCATGGGGCAAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CCA 72 bp GCCAATGACTTCATACCAGCCAGCCTATACCACGGATaGCACAATCTCCATGCCGGTATCTTAGCACAACTG +
Preference number: 3 (lower is better)
Translates to: ANDFIPASLYHG*HNLHAGILAQL
Trigger: CAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR-3UTR CAA 90 bp AGAAACACCCACATACACAACTCTTCCCCAAGTCTCCTTTTCCCAAACAAACAATCAGCGGAAGAGGGTTaGCACTGCAGGCCCCTCTCT +
Preference number: 3 (lower is better)
Translates to: RNTHIHNSSPSLLFPNKQSAEEG*HCRPLS
Trigger: AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGA...TTGTTTGTTTGGGAAAAGGAGACTTGGGGAAGAGTTGTGTATGTGGGTGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR TCA 72 bp CGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCCAATaGCTTCATACCAGCCAGCCTATACCACGGATGGCA +
Preference number: 3 (lower is better)
Translates to: RFLLLALWHTGQ*LHTSQPIPRMA
Trigger: TGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCTAAGAGAAGAAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
3UTR TCA 72 bp GTTCCTGCTTGGTGTCTGTGTCAGTTTCTGTTAGCATaGACAGCAGCTGGTTCCTCTGTGTACCAAGAACCC +
Preference number: 3 (lower is better)
Translates to: VPAWCLCQFLLA*TAAGSSVYQEP
Trigger: GGGTTCTTGGTACACAGAGGAACCAGCTGCTGTTCATGCTAACAGAAACTGACACAGACACCAAGCAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR GCA 72 bp AATCAATGCAAATCCTGTGAATGGGGCTTTCCGTGTTaGTGCCAGATAGGCCACATGGTGTCAGTTCTGAGG +
Preference number: 3 (lower is better)
Translates to: NQCKSCEWGFPC*CQIGHMVSVLR
Trigger: CCTCAGAACTGACACCATGTGGCCTATCTGGCAGCAACACGGAAAGCCCCATTCACAGGATTTGCATTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CCA 72 bp AGCGTCACTCATCTGTACATAGTTGTAACTCCCATGTaGAGTATCAGTCGCTCACAGGACTTGGATCGTGCC +
Preference number: 3 (lower is better)
Translates to: SVTHLYIVVTPM*SISRSQDLDRA
Trigger: GGCACGATCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACTATGTACAGATGAGTGACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CCA 72 bp TTGCTAGGCTGCTGGGTTTCAAGGCTACCATGGAGCTaGGGAGGGAAGAATGGGGCTTTGGATAAGTTAAAA +
Preference number: 3 (lower is better)
Translates to: LLGCWVSRLPWS*GGKNGALDKLK
Trigger: TTTTAACTTATCCAAAGCCCCATTCTTCCCTCCCCAGCTCCATGGTAGCCTTGAAACCCAGCAGCCTAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CAA 90 bp CTACACCTGGAGCTTGTTAGTCAAGGTCTAAAATCCCTAAGTGTGGTGACCTTTGGCCCACCTAGTCACTaGAGTTGCAGCTGCTTTCTC +
Preference number: 3 (lower is better)
Translates to: LHLELVSQGLKSLSVVTFGPPSH*SCSCFL
Trigger: GAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGCC...AAAGGTCACCACACTTAGGGATTTTAGACCTTGACTAACAAGCTCCAGGTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR CCA 72 bp GTGTCTGTGTCAGTTTCTGTTAGCATGAACAGCAGCTaGTTCCTCTGTGTACCAAGAACCCAGCGCTTTACA +
Preference number: 3 (lower is better)
Translates to: VSVSVSVSMNSS*FLCVPRTQRFT
Trigger: TGTAAAGCGCTGGGTTCTTGGTACACAGAGGAACCAGCTGCTGTTCATGCTAACAGAAACTGACACAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CCA 72 bp TTGCAGCTGCTTTCTCTCACACACCACAGGGGGCGCTaGACACATCTCTGTAAAATAATACAATTGTGCGTT +
Preference number: 3 (lower is better)
Translates to: LQLLSLTHHRGR*THLCKIIQLCV
Trigger: AACGCACAATTGTATTATTTTACAGAGATGTGTCCAGCGCCCCCTGTGGTGTGTGAGAGAAAGCAGCTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR CCA 72 bp TCTCCTATCCTTTACCGACGGCTTGTGTGTTTGTGTTaGGGTGTGCCATCACTTCCTATTTGTGTAGACAGT +
Preference number: 3 (lower is better)
Translates to: SPILYRRLVCLC*GVPSLPICVDS
Trigger: ACTGTCTACACAAATAGGAAGTGATGGCACACCCCAACACAAACACACAAGCCGTCGGTAAAGGATAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CAA 90 bp AAGCAAAATCACATACTGTTTGTTTGCTCCAGGGCAGACAACACTGCTAGATTCGAGGTTCTGAGGAAATaGTTCAGAGTACCGCCACAG +
Preference number: 3 (lower is better)
Translates to: KQNHILFVCSRADNTARFEVLRK*FRVPPQ
Trigger: CTGTGGCGGTACTCTGAACAATTTCCTCAGAACCTC...GAATCTAGCAGTGTTGTCTGCCCTGGAGCAAACAAACAGTATGTGATTTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR TCA 72 bp AAGCCAATGGCATCTCTAGATGGGAAAGGTAACTTTTaGCTGTCTTCTAACAGGTGGGTTGGGAGCTGCTTA +
Preference number: 3 (lower is better)
Translates to: KPMASLDGKGNF*LSSNRWVGSCL
Trigger: TAAGCAGCTCCCAACCCACCTGTTAGAAGACAGTCAAAAGTTACCTTTCCCATCTAGAGATGCCATTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 72 bp GCCAGTTGTCTTAAGGAAACTGCCGGCTGGCTGGTTTaGGAACTGAGAAGTGGTGGGTTAATTTCTAATCAA +
Preference number: 3 (lower is better)
Translates to: ASCLKETAGWLV*ELRSGGLISNQ
Trigger: TTGATTAGAAATTAACCCACCACTTCTCAGTTCTCAAACCAGCCAGCCGGCAGTTTCCTTAAGACAACTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CCA 72 bp ACCTGCATGTGGCTGTCTAGATCCCCAGGAATGTATTaGACCTTTTCAAAGCCCACCATTAACACTGTATTC +
Preference number: 3 (lower is better)
Translates to: TCMWLSRSPGMY*TFSKPTINTVF
Trigger: GAATACAGTGTTAATGGTGGGCTTTGAAAAGGTCCAATACATTCCTGGGGATCTAGACAGCCACATGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CAA 90 bp TCCTTTACCGACGGCTTGTGTGTTTGTGTTGGGGTGTGCCATCACTTCCTATTTGATTGTTGTAAGCCTTaGGTTTTCCAGAATTCTGAA +
Preference number: 3 (lower is better)
Translates to: SFTDGLCVCVGVCHHFLFDCCKP*VFQNSE
Trigger: TTCAGAATTCTGGAAAACCAAAGGCTTACAACAATC...AAATAGGAAGTGATGGCACACCCCAACACAAACACACAAGCCGTCGGTAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR TCA 72 bp ATAAAGGTGATCAGTACTCACAGACTTCTAATTAGATaGGGTCAGATGTCCATGGTGCAACTCTTACGGCAT +
Preference number: 3 (lower is better)
Translates to: IKVISTHRLLIR*GQMSMVQLLRH
Trigger: ATGCCGTAAGAGTTGCACCATGGACATCTGACCTCATCTAATTAGAAGTCTGTGAGTACTGATCACCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR-3UTR CAA 90 bp CTTGTTAGTCAAGGTCTAAAATCCCTAAGTGTGGTGACCTTTCCATTTCATCCTAGAATTATAACCATCTaGCCTTCTGCTGAATCCACC +
Preference number: 3 (lower is better)
Translates to: LVSQGLKSLSVVTFPFHPRIITI*PSAEST
Trigger: GGTGGATTCAGCAGAAGGCAAGATGGTTATAATTCT...AGGATGAAATGGAAAGGTCACCACACTTAGGGATTTTAGACCTTGACTAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR GCA 72 bp GTAATTAAAACCAGCAGCCTAGTTACCCAGAAAGAGTaGTTGCTATGCACCTGTAGTTCAATCTTTCTTTCT +
Preference number: 3 (lower is better)
Translates to: VIKTSSLVTQKE*LLCTCSSIFLS
Trigger: AGAAAGAAAGATTGAACTACAGGTGCATAGCAAGCACTCTTTCTGGGTAACTAGGCTGCTGGTTTTAATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp AGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACATCAGCAGCACCAGCGCTaGCACGAACCCCGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: SAPNGPEPGGSDQEHSPHQQHQR*HEPRPV
Trigger: GACCGGCCGGGGTTCGTGGCAGCGCTGGTGCTGCTG...ATGTGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp AATCCTGCCAGCCCCTGTGACCGCCAGACCCCATGCAGGACAGAGAGCACATTCCCCACCGTGCCCTCCTaGACGAAGCCAGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: NPASPCDRQTPCRTESTFPTVPS*TKPAGP
Trigger: GGGCCCAGCTGGCTTCGTGCAGGAGGGCACGGTGGG...GAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTCACAGGGGCTGGCAGGATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000483224.5
ENST00000632740.1
CDS-3UTR TCA 90 bp CTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTGCTTCAAGGCCCTGCCAGCCCCTGTaGCCGCCAGACCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: LQAPLLTEVEVRLVSASRPCQPL*PPDPMQ
Trigger: CTGCATGGGGTCTGGCGGTCACAGGGGCTGGCAGGG...CCTTGAAGCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR TCA 90 bp CAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGCCGAGTCCACGCCACTaGCAGGACAGCTCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: QLLSGRGFALQAPLLTEVPSPRH*QDSSPG
Trigger: TCCCGGGGAGCTGTCCTGTCAGTGGCGTGGACTCGG...CACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCACAGCAGCACCAGCGCTaGCACGAACCCCGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: ALGPIVQTAAQRKRVCTAQQHQR*HEPRPV
Trigger: GACCGGCCGGGGTTCGTGGCAGCGCTGGTGCTGCTG...TGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336733.10
ENST00000464350.6
ENST00000632575.1
ENST00000634032.1
CDS-3UTR GCA 90 bp GGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTACCAGCCACCAGCGCTaGCACGAACCCCGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: GRGFALQAPLLTEVEVRLTSHQR*HEPRPV
Trigger: GACCGGCCGGGGTTCGTGGCAGCGCTGGTGGCTGGT...AAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354883.11
ENST00000633701.1
ENST00000676754.1
CDS-3UTR GCA 90 bp AGCTGGCCCAGGCCCTCCTTTCAGTCTGACATGAGAATGGCGAGAATGGCTCACCCCACCGTGCCCTCCTaGACGAAGCCAGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SWPRPSFQSDMRMARMAHPTVPS*TKPAGP
Trigger: GGGCCCAGCTGGCTTCGTGCAGGAGGGCACGGTGGG...GTGAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGCCTGGGCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp CAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGGGTCCTGCCCCGAGTaGCAAGGGTCGCTCTACCCC +
Preference number: 4 (lower is better)
Translates to: QLLSGRGFALQAPLLTEVGSCPE*QGSLYP
Trigger: GGGGTAGAGCGACCCTTGGCACTCGGGGCAGGACCC...CACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGACTGCCGCTGGGTCCTaGCCCGAGTGCCAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: QLLSGRGFALQAPLLTEVTAAGS*PECQGS
Trigger: CGACCCTTGGCACTCGGGGCAGGACCCAGCGGCAGT...CACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp TCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCCCCACCGTGCCCTCCTaGACGAAGCCAGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SSALGPIVQTAAQRKRVCPTVPS*TKPAGP
Trigger: GGGCCCAGCTGGCTTCGTGCAGGAGGGCACGGTGGG...GCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp GCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTTGGATCGTGCCCTCCTaGACGAAGCCAGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: AQRKRVCTAGPSLDRSGGWIVPS*TKPAGP
Trigger: GGGCCCAGCTGGCTTCGTGCAGGAGGGCACGATCCA...ACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp AGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCCAGCAGGACTGCCGCTaGGTCCTGCCCCGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: RVCTAGPSLDRSGGEACLQQDCR*VLPRVP
Trigger: TGGCACTCGGGGCAGGACCCAGCGGCAGTCCTGCTG...GAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp TTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGCCAAGTGCGCCAAATaGCCCGGAGCCGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: FRQLLSGRGFALQAPLLTAKCAK*PGAGWE
Trigger: CTCCCACCCGGCTCCGGGCCATTTGGCGCACTTGGC...TGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CCAGTGCAGCAGGACTGCCGCTGGGTCCTGCCCCGAGTGCCAAGGGTCGCTCTAAGCCAGAAACCACCATaGCTATGGTGGGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: PVQQDCRWVLPRVPRVALSQKPP*LWWART
Trigger: TGTCCTTGCCCACCATAGCCATGGTGGTTTCTGGCT...TAGAGCGACCCTTGGCACTCGGGGCAGGACCCAGCGGCAGTCCTGCTGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp TCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCTCCTGCCAGCCCCTGTaGCCGCCAGACCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: SSALGPIVQTAAQRKRVCSCQPL*PPDPMQ
Trigger: CTGCATGGGGTCTGGCGGTCACAGGGGCTGGCAGGA...GCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR TCA 90 bp CCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGCCCTGCCAGCCCCTGTaGCCGCCAGACCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: PMTSYQPAYTTDGTISMPPCQPL*PPDPMQ
Trigger: CTGCATGGGGTCTGGCGGTCACAGGGGCTGGCAGGG...CGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR TCA 90 bp CTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCTCCCCAAAGCATGTaGCGCCAGTCCCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: LGPIVQTAAQRKRVCTAGPPQSM*RQSRVH
Trigger: GTGGACTCGGGACTGGCGTCACATGCTTTGGGGAGG...GCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp TATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTCACGTCCTCGCGCGCTaGGCGCCGCCATGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: YSSDSCSAEEGLHCRPLSHVLAR*APPCLR
Trigger: CCTCAAACATGGCGGCGCCCAGCGCGCGAGGACGTG...AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354883.11
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CCA 90 bp TTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACCAGCAGGACTGCCGCTaGGTCCTGCCCCGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: FSTGAYSSDSCSAEEGLHQQDCR*VLPRVP
Trigger: TGGCACTCGGGGCAGGACCCAGCGGCAGTCCTGCTG...GTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp TATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTGCCAAGTGCGCCAAATaGCCCGGAGCCGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: YSSDSCSAEEGLHCRPLSAKCAK*PGAGWE
Trigger: CTCCCACCCGGCTCCGGGCCATTTGGCGCACTTGGC...AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp CAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGCGTCTAGAGGGGTGGTaGCTGCAGCGGCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: QLLSGRGFALQAPLLTEVRLEGW*LQRQIH
Trigger: GTGGATTTGCCGCTGCAGTCACCACCCCTCTAGACG...CACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR TCA 90 bp TCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCTCCTGCCAGCCCCTGTaGCCGCCAGACCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: SLAYRPMTSYQPAYTTDGSCQPL*PPDPMQ
Trigger: CTGCATGGGGTCTGGCGGTCACAGGGGCTGGCAGGA...GCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR TCA 90 bp GCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGGAGCCGGGTGGGAGTaGCCAAGAGCATTCTCCACA +
Preference number: 4 (lower is better)
Translates to: AQRKRVCTAGPSLDRSGGGAGWE*PRAFST
Trigger: TGTGGAGAATGCTCTTGGTCACTCCCACCCGGCTCC...ACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp CAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGTGGAGGGCAGTGGCGTaGTCTTGGCTCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: QLLSGRGFALQAPLLTEVWRAVA*SWLTAS
Trigger: GCTTGCAGTGAGCCAAGATCACGCCACTGCCCTCCA...CACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCACCAGCCACCAGCGCTaGCACGAACCCCGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: AYRPMTSYQPAYTTDGTITSHQR*HEPRPV
Trigger: GACCGGCCGGGGTTCGTGGCAGCGCTGGTGGCTGGT...GATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354883.11
ENST00000633701.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CCAAGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCATTCATGCCATTCTCCTaGCTCGGCCTCCCTAGTAGC +
Preference number: 4 (lower is better)
Translates to: PSAPNGPEPGGSDQEHSPFMPFS*LGLPSS
Trigger: GCTACTAGGGAGGCCGAGGCAGGAGAATGGCATGAA...TGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CGAGAATGGCTCACCCACCGTGCCCTCCTGCACGAAGCCAGCTGGGCCCACCTAGAACCGCCTTCTCTCTaGTTTCAACTCATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: REWLTHRALLHEASWAHLEPPSL*FQLMAL
Trigger: CAAGGCCATGAGTTGAAAGCAGAGAGAAGGCGGTTC...TAGGTGGGCCCAGCTGGCTTCGTGCAGGAGGGCACGGTGGGTGAGCCATTCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633701.1
CDS-3UTR CCA 90 bp AGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCACCCCGGCCGGTCCATaGTCGCTCAGACCTCGTCAA +
Preference number: 4 (lower is better)
Translates to: RVCTAGPSLDRSGGEACLTPAGP*SLRPRQ
Trigger: TTGACGAGGTCTGAGCGACCATGGACCGGCCGGGGT...GAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000464350.6
ENST00000632575.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCTCCCATCAGCAGTGCTaGAGCCAGCCTTTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: LGPIVQTAAQRKRVCTAGSHQQC*SQPLPA
Trigger: CGCTGGCAAAGGCTGGCTCCAGCACTGCTGATGGGA...GCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR TCA 90 bp AGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTCCTGCCAGCCCCTGTaGCCGCCAGACCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: SLYHGWHNLHAGILAQLVSCQPL*PPDPMQ
Trigger: CTGCATGGGGTCTGGCGGTCACAGGGGCTGGCAGGA...GACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp ATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCAGCAGCACCAGCGCTaGCACGAACCCCGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: IQANDFIPASLYHGWHNLQQHQR*HEPRPV
Trigger: GACCGGCCGGGGTTCGTGGCAGCGCTGGTGCTGCTG...GAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336733.10
ENST00000464350.6
ENST00000632575.1
ENST00000634032.1
CDS-3UTR GCA 90 bp CTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCCAGCAGCACCAGCGCTaGCACGAACCCCGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: LYHGWHNLHAGILAQLVFQQHQR*HEPRPV
Trigger: GACCGGCCGGGGTTCGTGGCAGCGCTGGTGCTGCTG...GAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336733.10
ENST00000464350.6
ENST00000632575.1
ENST00000634032.1
CDS-3UTR GCA 90 bp CTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCGACCGCCAGACCCCATaGAGGACAGAGAGCACATTC +
Preference number: 4 (lower is better)
Translates to: LGPIVQTAAQRKRVCTAGDRQTP*RTESTF
Trigger: GAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTC...GCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTATGGCTCACCCACCGTaGCCTCCTGCACGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: YSSDSCSAEEGLHCRPLSMAHPP*PPARSQ
Trigger: CTGGCTTCGTGCAGGAGGGCACGGTGGGTGAGCCAT...AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp GCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCATAAGCCCCCAGAAAGATGAAGGGTCCTGCCCCGAGTaGCAAGGGTCGCTCTACCCC +
Preference number: 4 (lower is better)
Translates to: ANFQQQAVRSVISPQKDEGSCPE*QGSLYP
Trigger: GGGGTAGAGCGACCCTTGGCACTCGGGGCAGGACCC...TTCATCTTTCTGGGGGCTTATGACCGAACGCACAGCTTGCTGTTGGAAGTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCAACTGCCGCTGGGTCCTaGCCCGAGTGCCAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: LLQGLFLPTSNSKLCVRSTAAGS*PECQGS
Trigger: CGACCCTTGGCACTCGGGGCAGGACCCAGCGGCAGT...TGACCGAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GAGCTGCTTAAACGGTCAAGTGGGGGTCTGACAGGTTCGTTCTTTCCTTGTAGGCCAGTGCAGCAGGACTaGCGCTGGGTCCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: ELLKRSSGGLTGSFFPCRPVQQD*RWVLPR
Trigger: TCGGGGCAGGACCCAGCGGCAGTCCTGCTGCACTGG...CCTACAAGGAAAGAACGAACCTGTCAGACCCCCACTTGACCGTTTAAGCAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp AGCTCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATCCAGTGCAGCAGGACTaGCGCTGGGTCCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: SSLAYRPMTSYQPAYTTDPVQQD*RWVLPR
Trigger: TCGGGGCAGGACCCAGCGGCAGTCCTGCTGCACTGG...ATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGGCCAGCTGCTTGTTTaGCCCATGGGTATTGTCCCC +
Preference number: 4 (lower is better)
Translates to: AQRKRVCTAGPSLDRSGGGQLLV*PMGIVP
Trigger: GGGGACAATACCCATGGGGCAAACAAGCAGCTGGCC...ACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGCGTCTTTCCTGGGTGTaGACATGGCCTTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: QLLSGRGFALQAPLLTEVRLSWV*TWPCTC
Trigger: GCAGGTGCAAGGCCATGTGCACACCCAGGAAAGACG...CACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGCACAACAACTGCACGTaGAACGCGAGACACCTGGGC +
Preference number: 4 (lower is better)
Translates to: QRKRVCTAGPSLDRSGGEHNNCT*NARHLG
Trigger: GCCCAGGTGTCTCGCGTTGCACGTGCAGTTGTTGTG...CTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CCA 90 bp GCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCCACGTCCTCGCGCGCTaGGCGCCGCCATGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: AYRPMTSYQPAYTTDGTIHVLAR*APPCLR
Trigger: CCTCAAACATGGCGGCGCCCAGCGCGCGAGGACGTG...GATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354883.11
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTATCAGGATGAGGAGGTaGCACTGCCAGCTGAGACGC +
Preference number: 4 (lower is better)
Translates to: RKRVCTAGPSLDRSGGEAIRMRR*HCQLRR
Trigger: GCGTCTCAGCTGGCAGTGCCACCTCCTCATCCTGAT...AGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR TCA 90 bp CTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCTCCTGCCAGCCCCTGTaGCCGCCAGACCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: LYHGWHNLHAGILAQLVFSCQPL*PPDPMQ
Trigger: CTGCATGGGGTCTGGCGGTCACAGGGGCTGGCAGGA...GAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR TCA 90 bp ATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCATCCTGCCAGCCCCTGTaGCCGCCAGACCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: ILAQLVFSTGAYSSDSCSSCQPL*PPDPMQ
Trigger: CTGCATGGGGTCTGGCGGTCACAGGGGCTGGCAGGA...TGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR TCA 90 bp ATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCCGAGTCCACGCCACTaGCAGGACAGCTCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: IPRMAQSPCRYLSTTGLQPSPRH*QDSSPG
Trigger: TCCCGGGGAGCTGTCCTGTCAGTGGCGTGGACTCGG...CTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp CCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCCGGGTCGTATGCAGTaGCTGCAACACCGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: PIVQTAAQRKRVCTAGPSPGRMQ*LQHRSG
Trigger: TCCACTTCGGTGTTGCAGTCACTGCATACGACCCGG...AGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp GTTGTAGTCATGTGCCCTGGGGCTAGGGCTTCTCCTGCTCGGCAAACTAGATCATCTGGTTGGTGGGGCTaGGGATGCACAGGGACCTCA +
Preference number: 4 (lower is better)
Translates to: VVVMCPGARASPARQTRSSGWWG*GCTGTS
Trigger: TGAGGTCCCTGTGCATCCTCAGCCCCACCAACCAGA...TGATCTAGTTTGCCGAGCAGGAGAAGCCCTAGCCCCAGGGCACATGACTACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp CGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTAGAGCAGCGGTAGAATaGGGCCGGCGTGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: RKRVCTAGPSLDRSGGEARAAVE*GRRDSE
Trigger: TTCAGAATCACGCCGGCCTCATTCTACCGCTGCTCT...AGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CCAAGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCAGCTGGAGCCAGCCTTTaGCAGCGTAATTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: PSAPNGPEPGGSDQEHSPAGASL*QRNSCL
Trigger: AAGACAAGAATTACGCTGGCAAAGGCTGGCTCCAGC...TGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTGACCGCCAGACCCCATaGAGGACAGAGAGCACATTC +
Preference number: 4 (lower is better)
Translates to: LVFSTGAYSSDSCSAEEGDRQTP*RTESTF
Trigger: GAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTC...ACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGACCGCCAGACCCCATaGAGGACAGAGAGCACATTC +
Preference number: 4 (lower is better)
Translates to: FRQLLSGRGFALQAPLLTDRQTP*RTESTF
Trigger: GAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTC...TGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTCAGCGGAAGAGGGTTTaGACTGCAGGCCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: GRGFALQAPLLTEVEVRLQRKRV*TAGPSL
Trigger: AAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG...AAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCCCACCGTGCCCTCCTaGACGAAGCCAGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LRKLFRVPPQTPFSSLSSPTVPS*TKPAGP
Trigger: GGGCCCAGCTGGCTTCGTGCAGGAGGGCACGGTGGG...AGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp CTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCATGGATCGTGCCCTCCTaGACGAAGCCAGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LHAGILAQLVFSTGAYSSWIVPS*TKPAGP
Trigger: GGGCCCAGCTGGCTTCGTGCAGGAGGGCACGATCCA...TGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp TCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACCCCGGCCGGTCCATaGTCGCTCAGACCTCGTCAA +
Preference number: 4 (lower is better)
Translates to: SLAYRPMTSYQPAYTTDGTPAGP*SLRPRQ
Trigger: TTGACGAGGTCTGAGCGACCATGGACCGGCCGGGGT...GCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000464350.6
ENST00000632575.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp ACCCAGCCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATGCTCCCATCAGCAGTGCTaGAGCCAGCCTTTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: TQPETTMAMVGKDIRFTCSHQQC*SQPLPA
Trigger: CGCTGGCAAAGGCTGGCTCCAGCACTGCTGATGGGA...GCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGGCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CCAGCCCCTGTGACCGCCAGACCCCATGCAGGACAGAGAGCACATTCCCATCAGGGGTGCCACTGCTGTTaGCACCAAAAAGCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: PAPVTARPHAGQRAHSHQGCHCC*HQKARF
Trigger: AAACCTAGCTTTTTGGTGCCAACAGCAGTGGCACCC...CTGATGGGAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTCACAGGGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp GTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTGCAGCCTGTCCTCTGTGTaGGGACGAAGACTCCCACAG +
Preference number: 4 (lower is better)
Translates to: VCTAGPSLDRSGGEACLCSLSSV*GRRLPQ
Trigger: CTGTGGGAGTCTTCGTCCCCACACAGAGGACAGGCT...GCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CCAGCCCCTGTGACCGCCAGACCCCATGCAGGACAGAGAGCACATTCCCATCAGGTTTCAAGGCTACCATaGAGCTGGGGAGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: PAPVTARPHAGQRAHSHQVSRLP*SWGGKN
Trigger: ATTCTTCCCTCCCCAGCTCCATGGTAGCCTTGAAAC...CTGATGGGAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTCACAGGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp CTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCTGGCATACAGGCCAATaGCTTCATACCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LGPIVQTAAQRKRVCTAGWHTGQ*LHTSQP
Trigger: AGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCA...GCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR TCA 90 bp CGAGAATGGCTCACCCACCGTGCCCTCCTGCACGAAGCCAGCTGGGCCCACCTATCAGGTGGCAGGAAATaGAAGATCAGATACAGATCA +
Preference number: 4 (lower is better)
Translates to: REWLTHRALLHEASWAHLSGGRK*KIRYRS
Trigger: TGATCTGTATCTGATCTTTCATTTCCTGCCACCTGA...TAGGTGGGCCCAGCTGGCTTCGTGCAGGAGGGCACGGTGGGTGAGCCATTCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp GGTGAGGCTTGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCCCTCCCCAAAGCATGTaGCGCCAGTCCCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: GEACLCFKDSFCQLPTASPPQSM*RQSRVH
Trigger: GTGGACTCGGGACTGGCGTCACATGCTTTGGGGAGG...GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp TCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCGGAGCCGGGTGGGAGTaGCCAAGAGCATTCTCCACA +
Preference number: 4 (lower is better)
Translates to: SEYRHRPRFLLLALWHTGGAGWE*PRAFST
Trigger: TGTGGAGAATGCTCTTGGTCACTCCCACCCGGCTCC...GCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp CAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGCCTGACTGTTTTGTGTaGAAGTCAGCAGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QLLSGRGFALQAPLLTEVPDCFV*KSAGRA
Trigger: GGCTCTGCCTGCTGACTTTCACACAAAACAGTCAGG...CACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CAGTCTGACATGAGAATGGCGAGAATGGCTCACCCACCGTGCCCTCCTGCACGAAGCGGCAAATCCACCTaGAAAAGCTCCACAGACTGC +
Preference number: 4 (lower is better)
Translates to: QSDMRMARMAHPPCPPARSGKST*KSSTDC
Trigger: GCAGTCTGTGGAGCTTTTGCAGGTGGATTTGCCGCT...TCGTGCAGGAGGGCACGGTGGGTGAGCCATTCTCGCCATTCTCATGTCAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp TTTCAGTCTGACATGAGAATGGCGAGAATGGCTCACCCACCGTGCCCTCCTGCAGACCGCCAGACCCCATaGAGGACAGAGAGCACATTC +
Preference number: 4 (lower is better)
Translates to: FQSDMRMARMAHPPCPPADRQTP*RTESTF
Trigger: GAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTC...TGCAGGAGGGCACGGTGGGTGAGCCATTCTCGCCATTCTCATGTCAGACTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp CACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGGACCGCCAGACCCCATaGAGGACAGAGAGCACATTC +
Preference number: 4 (lower is better)
Translates to: HNWSSALGPIVQTAAQRKDRQTP*RTESTF
Trigger: GAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTC...CTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACATCCCAGACTGATGGCTaGCATTCGAGGGAAGACACC +
Preference number: 4 (lower is better)
Translates to: FRQLLSGRGFALQAPLLTSQTDG*HSREDT
Trigger: GGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGA...TGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCCAGCGGAAGAGGGTTTaGACTGCAGGCCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSALGPIVQTAAQRKRVCQRKRV*TAGPSL
Trigger: AAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG...GCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CGGGTCGTATGCAGTGACTGCAACACCGAAGTGGACTGTTACTCCAGGGGACAACAGCGGAAGAGGGTTTaGACTGCAGGCCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: RVVCSDCNTEVDCYSRGQQRKRV*TAGPSL
Trigger: AAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG...TTGTCCCCTGGAGTAACAGTCCACTTCGGTGTTGCAGTCACTGCATACGACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp TTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACCAGCGGAAGAGGGTTTaGACTGCAGGCCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: FSTGAYSSDSCSAEEGLHQRKRV*TAGPSL
Trigger: AAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG...GTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCTGCCGACCGACCCTCTaGAAAGGGAGGCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: SLAYRPMTSYQPAYTTDGCRPTL*KGRPLL
Trigger: AAGCAGTGGCCTCCCTTTGCAGAGGGTCGGTCGGCA...GCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR GCA 90 bp ACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCATAAGCCCCCAGCGAAGTCCAGGCAGCTaGCGACCGACCCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TLSANFQQQAVRSVISPQRSPGS*RPTLCK
Trigger: TTTGCAGAGGGTCGGTCGGCAGCTGCCTGGACTTCG...CTGGGGGCTTATGACCGAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR GCA 90 bp TCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCATGAGGAGGTGGCACTaGCAGCTGAGACGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: SEYRHRPRFLLLALWHTGMRRWH*QLRRPK
Trigger: CTTCGGGCGTCTCAGCTGGCAGTGCCACCTCCTCAT...GCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR GCA 90 bp AGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACATGTCAGATGTCCATGGTaGAACTCTTACGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: SAPNGPEPGGSDQEHSPHVRCPW*NSYGIW
Trigger: CCAGATGCCGTAAGAGTTGCACCATGGACATCTGAC...ATGTGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp GCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCACCCCGGCCGGTCCATaGTCGCTCAGACCTCGTCAA +
Preference number: 4 (lower is better)
Translates to: AYRPMTSYQPAYTTDGTITPAGP*SLRPRQ
Trigger: TTGACGAGGTCTGAGCGACCATGGACCGGCCGGGGT...GATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000464350.6
ENST00000632575.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp TACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACCCCGGCCGGTCCATaGTCGCTCAGACCTCGTCAA +
Preference number: 4 (lower is better)
Translates to: YHGWHNLHAGILAQLVFSTPAGP*SLRPRQ
Trigger: TTGACGAGGTCTGAGCGACCATGGACCGGCCGGGGT...GCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000464350.6
ENST00000632575.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CATGGCCTTGCACCTGCATGTGGCTGTCTAGATCCCCAGGAATGTATTGGACCTTCCCATCAGCAGTGCTaGAGCCAGCCTTTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: HGLAPACGCLDPQECIGPSHQQC*SQPLPA
Trigger: CGCTGGCAAAGGCTGGCTCCAGCACTGCTGATGGGA...AGGTCCAATACATTCCTGGGGATCTAGACAGCCACATGCAGGTGCAAGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCAGCCTATACCACGGATaGCACAATCTCCATGCCGGT +
Preference number: 4 (lower is better)
Translates to: LGPIVQTAAQRKRVCTAGSLYHG*HNLHAG
Trigger: ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT...GCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp AGCTGGCCCAGGCCCTCCTTTCAGTCTGACATGAGAATGGCGAGAATGGCTCACCTGCCTTTTCAAAGCTaGCCCAGGCCCTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SWPRPSFQSDMRMARMAHLPFQS*PRPSFQ
Trigger: CTGAAAGGAGGGCCTGGGCCAGCTTTGAAAAGGCAG...GTGAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGCCTGGGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp ACCCAGCCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATGCAGGCTACCATGGAGCTaGGGAGGGAAGAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: TQPETTMAMVGKDIRFTCRLPWS*GGKNGA
Trigger: AGCCCCATTCTTCCCTCCCCAGCTCCATGGTAGCCT...GCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CAA 72 bp CTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTaGACAGAAGTGGAGGTGAGGCTTGTCTCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: LSGRGFALQAPL*TEVEVRLVSAS
Trigger: TGAAGCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
3UTR CAA 72 bp GTCAGATGTCCATGGTGCAACTCTTACGGCATCTGGTaGGTGGGGCTGAGGATGCACAGGGACCTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: VRCPWCNSYGIW*VGLRMHRDLKL
Trigger: GAGCTTGAGGTCCCTGTGCATCCTCAGCCCCACCAACCAGATGCCGTAAGAGTTGCACCATGGACATCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp AGCTCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATCGTCTAGAGGGGTGGTaGCTGCAGCGGCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: SSLAYRPMTSYQPAYTTDRLEGW*LQRQIH
Trigger: GTGGATTTGCCGCTGCAGTCACCACCCCTCTAGACG...ATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR TCA 90 bp GAGCTGCTTAAACGGTCAAGTGGGGGTCTGACAGGTTCGTTCTTTCCTTGTAGGCGTCTAGAGGGGTGGTaGCTGCAGCGGCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: ELLKRSSGGLTGSFFPCRRLEGW*LQRQIH
Trigger: GTGGATTTGCCGCTGCAGTCACCACCCCTCTAGACG...CCTACAAGGAAAGAACGAACCTGTCAGACCCCCACTTGACCGTTTAAGCAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp CCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTTGGCATACAGGCCAATaGCTTCATACCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PIVQTAAQRKRVCTAGPSWHTGQ*LHTSQP
Trigger: AGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCA...AGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR TCA 90 bp CAGTCTGACATGAGAATGGCGAGAATGGCTCACCCACCGTGCCCTCCTGCACGACCTTTCAGTCTGACATaGGAATGGCGAGAATGGCTC +
Preference number: 4 (lower is better)
Translates to: QSDMRMARMAHPPCPPARPFSLT*EWREWL
Trigger: GAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGG...TCGTGCAGGAGGGCACGGTGGGTGAGCCATTCTCGCCATTCTCATGTCAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp CATGGCCTTGCACCTGCATGTGGCTGTCTAGATCCCCAGGAATGTATTGGACCTCCGGGTCGTATGCAGTaGCTGCAACACCGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: HGLAPACGCLDPQECIGPPGRMQ*LQHRSG
Trigger: TCCACTTCGGTGTTGCAGTCACTGCATACGACCCGG...AGGTCCAATACATTCCTGGGGATCTAGACAGCCACATGCAGGTGCAAGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp AATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTTCTGGTTGGTGGGGCTaGGGATGCACAGGGACCTCA +
Preference number: 4 (lower is better)
Translates to: NDFIPASLYHGWHNLHAGSGWWG*GCTGTS
Trigger: TGAGGTCCCTGTGCATCCTCAGCCCCACCAACCAGA...ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp TTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGGCCGGCTGGCTGGTTTaGGAACTGAGAAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: FRVPPQTPFSSLSSLAYRAGWLV*ELRSGG
Trigger: CCCACCACTTCTCAGTTCTCAAACCAGCCAGCCGGC...CCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp GGTGAGGCTTGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGGAGGGCAGTGGCGTaGTCTTGGCTCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: GEACLCFKDSFCQLPTASWRAVA*SWLTAS
Trigger: GCTTGCAGTGAGCCAAGATCACGCCACTGCCCTCCA...GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp AGCTGGCCCAGGCCCTCCTTTCAGTCTGACATGAGAATGGCGAGAATGGCTCACACTTCCGGGACCACGTaGCGTAGAACCACAACAACT +
Preference number: 4 (lower is better)
Translates to: SWPRPSFQSDMRMARMAHTSGTT*RRTTTT
Trigger: AGTTGTTGTGGTTCTACGTCACGTGGTCCCGGAAGT...GTGAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGCCTGGGCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633701.1
CDS-3UTR GCA 90 bp TTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAAGCGGCAAATCCACCTaGAAAAGCTCCACAGACTGC +
Preference number: 4 (lower is better)
Translates to: FRQLLSGRGFALQAPLLTSGKST*KSSTDC
Trigger: GCAGTCTGTGGAGCTTTTGCAGGTGGATTTGCCGCT...TGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGCATTCCCATCAGCAGTaGTGGAGCCAGCCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: HNWSSALGPIVQTAAQRKHSHQQ*WSQPLP
Trigger: TGGCAAAGGCTGGCTCCAGCACTGCTGATGGGAATG...CTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp ATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCGACCGCCAGACCCCATaGAGGACAGAGAGCACATTC +
Preference number: 4 (lower is better)
Translates to: MAQSPCRYLSTTGLQHWGDRQTP*RTESTF
Trigger: GAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTC...GCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CCACTGTCTCCTATCCTTTACCGACGGCTTGTGTGTTTGTGTTGGGGTGTGCCAGACCGCCAGACCCCATaGAGGACAGAGAGCACATTC +
Preference number: 4 (lower is better)
Translates to: PLSPILYRRLVCLCWGVPDRQTP*RTESTF
Trigger: GAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTC...TGGCACACCCCAACACAAACACACAAGCCGTCGGTAAAGGATAGGAGACAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp TCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCGACCGCCAGACCCCATaGAGGACAGAGAGCACATTC +
Preference number: 4 (lower is better)
Translates to: SEYRHRPRFLLLALWHTGDRQTP*RTESTF
Trigger: GAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTC...GCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTCCCAGACTGATGGCTaGCATTCGAGGGAAGACACC +
Preference number: 4 (lower is better)
Translates to: FSTGAYSSDSCSAEEGLHSQTDG*HSREDT
Trigger: GGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGA...GTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp ATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCAGCGGAAGAGGGTTTaGACTGCAGGCCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: MAQSPCRYLSTTGLQHWGQRKRV*TAGPSL
Trigger: AAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG...GCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCATAAGCCCCCAGAAAGATGAACGAAGTCCAGGCAGCTaGCGACCGACCCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: ANFQQQAVRSVISPQKDERSPGS*RPTLCK
Trigger: TTTGCAGAGGGTCGGTCGGCAGCTGCCTGGACTTCG...TTCATCTTTCTGGGGGCTTATGACCGAACGCACAGCTTGCTGTTGGAAGTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR GCA 90 bp CCCGGACTCCACAGAGCTACAGCCTGCATCTTCATTAACTTCAGGCAGTCCAGACCGGGAAACAGAGGGTaGCACTGCTGTTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: PGLHRATACIFINFRQSRPGNRG*HCCWHQ
Trigger: TTGGTGCCAACAGCAGTGGCACCCTCTGTTTCCCGG...TCTGGACTGCCTGAAGTTAATGAAGATGCAGGCTGTAGCTCTGTGGAGTCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTGCTTCAAGGCGGAAGCCCAGTACTTaGTTGTTTCCAATGGCCACC +
Preference number: 4 (lower is better)
Translates to: LQAPLLTEVEVRLVSASRRKPST*LFPMAT
Trigger: GGTGGCCATTGGAAACAAGCAAGTACTGGGCTTCCG...CCTTGAAGCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CGGGTCGTATGCAGTGACTGCAACACCGAAGTGGACTGTTACTCCAGGGGACAAAGGTGGGTTGGGAGCTaGTTAAACGGTCAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RVVCSDCNTEVDCYSRGQRWVGS*LNGQVG
Trigger: CCCCACTTGACCGTTTAAGCAGCTCCCAACCCACCT...TTGTCCCCTGGAGTAACAGTCCACTTCGGTGTTGCAGTCACTGCATACGACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp TCCTGGACTTTAGCAAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTGCAGGTGGCCGGGTCGTATaGAGTGACTGCAACACCGAA +
Preference number: 4 (lower is better)
Translates to: SWTLARLYHPDSTELQPAGGRVV*SDCNTE
Trigger: TTCGGTGTTGCAGTCACTGCATACGACCCGGCCACC...TGCAGGCTGTAGCTCTGTGGAGTCCGGGTGATACAACCTTGCTAAAGTCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGGGCTTTCCGTGTTGCTaGCAGATAGGCCACATGGTG +
Preference number: 4 (lower is better)
Translates to: HNWSSALGPIVQTAAQRKGFPCC*QIGHMV
Trigger: CACCATGTGGCCTATCTGGCAGCAACACGGAAAGCC...CTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GTTGTAGTCATGTGCCCTGGGGCTAGGGCTTCTCCTGCTCGGCAAACTAGATCAGTGTGCACATGGCCTTaGACCTGCATGTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: VVVMCPGARASPARQTRSVCTWP*TCMWLS
Trigger: AGACAGCCACATGCAGGTGCAAGGCCATGTGCACAC...TGATCTAGTTTGCCGAGCAGGAGAAGCCCTAGCCCCAGGGCACATGACTACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CCAAGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCATTGTGTAGACAGTCATaGTCAGCCACAGGTGACAAA +
Preference number: 4 (lower is better)
Translates to: PSAPNGPEPGGSDQEHSPLCRQS*SATGDK
Trigger: TTTGTCACCTGTGGCTGAGCATGACTGTCTACACAA...TGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGCTTACCTCGGTTTCCTaGAGCAGCGTTGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: HNWSSALGPIVQTAAQRKLTSVS*SSVVCS
Trigger: GCTGCACACAACGCTGCTGCAGGAAACCGAGGTAAG...CTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CCA 90 bp AATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTACCCCGGCCGGTCCATaGTCGCTCAGACCTCGTCAA +
Preference number: 4 (lower is better)
Translates to: NLHAGILAQLVFSTGAYSTPAGP*SLRPRQ
Trigger: TTGACGAGGTCTGAGCGACCATGGACCGGCCGGGGT...ACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000464350.6
ENST00000632575.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCATCCCATCAGCAGTGCTaGAGCCAGCCTTTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: LHAGILAQLVFSTGAYSSSHQQC*SQPLPA
Trigger: CGCTGGCAAAGGCTGGCTCCAGCACTGCTGATGGGA...TGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTTCCCATCAGCAGTGCTaGAGCCAGCCTTTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: QPIPRMAQSPCRYLSTTGSHQQC*SQPLPA
Trigger: CGCTGGCAAAGGCTGGCTCCAGCACTGCTGATGGGA...ACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp AGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCAGCCTATACCACGGATaGCACAATCTCCATGCCGGT +
Preference number: 4 (lower is better)
Translates to: RVCTAGPSLDRSGGEACLSLYHG*HNLHAG
Trigger: ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT...GAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTAGCCTATACCACGGATaGCACAATCTCCATGCCGGT +
Preference number: 4 (lower is better)
Translates to: PIVQTAAQRKRVCTAGPSSLYHG*HNLHAG
Trigger: ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT...AGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTAACTCTTACGGCATCTaGTTGGTGGGGCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: LVFSTGAYSSDSCSAEEGNSYGI*LVGLRM
Trigger: CATCCTCAGCCCCACCAACCAGATGCCGTAAGAGTT...ACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp ACAGAAGTGGAGGTGAGGCTTGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCCGTCTAGAGGGGTGGTaGCTGCAGCGGCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: TEVEVRLVSASRTLSANFRLEGW*LQRQIH
Trigger: GTGGATTTGCCGCTGCAGTCACCACCCCTCTAGACG...GAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACCTCCACTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
CDS-3UTR TCA 90 bp TTTCTCTCACACACCACAGGGGGCGCTGGACACATCTCAAACTTATTTATTAAGTCCTGCCAGCCCCTGTaGCCGCCAGACCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: FLSHTTGGAGHISNLFIKSCQPL*PPDPMQ
Trigger: CTGCATGGGGTCTGGCGGTCACAGGGGCTGGCAGGA...CTTAATAAATAAGTTTGAGATGTGTCCAGCGCCCCCTGTGGTGTGTGAGAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp GTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGTGGCATACAGGCCAATaGCTTCATACCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VFSTGAYSSDSCSAEEGLWHTGQ*LHTSQP
Trigger: AGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCA...CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR TCA 90 bp TATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGGCATACAGGCCAATaGCTTCATACCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: YSSDSCSAEEGLHCRPLSWHTGQ*LHTSQP
Trigger: AGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCA...AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR TCA 90 bp TCCTGCCTCCAGGACCAGAGGGCTTTTAAGGACTCCCATAAGGGAAACTGGACCCATCTTGCCTTCTGCTaGATCCACCATCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SCLQDQRAFKDSHKGNWTHLAFC*IHHQVA
Trigger: TGCCACCTGATGGTGGATTCAGCAGAAGGCAAGATG...GGTCCAGTTTCCCTTATGGGAGTCCTTAAAAGCCCTCTGGTCCTGGAGGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483224.5
ENST00000632740.1
CDS-3UTR TCA 90 bp GTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCATCTTGCCTTCTGCTaGATCCACCATCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VFSTGAYSSDSCSAEEGLHLAFC*IHHQVA
Trigger: TGCCACCTGATGGTGGATTCAGCAGAAGGCAAGATG...CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp AGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCCCTTTCAGTCTGACATaGGAATGGCGAGAATGGCTC +
Preference number: 4 (lower is better)
Translates to: RVCTAGPSLDRSGGEACLPFSLT*EWREWL
Trigger: GAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGG...GAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp GCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGCCCTCCTTTCAGTCTaGCATGAGAATGGCGAGAAT +
Preference number: 4 (lower is better)
Translates to: ALGPIVQTAAQRKRVCTAALLSV*HENGEN
Trigger: ATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGC...TGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp ATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCAACTCGGCATCAGGATaGGGAGGTGGCACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: IQANDFIPASLYHGWHNLNSASG*GGGTAS
Trigger: GCTGGCAGTGCCACCTCCTCATCCTGATGCCGAGTT...GAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR TCA 90 bp AGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTCTTGCACAGTGGAGCTaGGCAGCCTGTCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SQPIPRMAQSPCRYLSTTLAQWS*AACPLC
Trigger: ACACAGAGGACAGGCTGCTCAGCTCCACTGTGCAAG...AGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp AGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCCTTGCACAGTGGAGCTaGGCAGCCTGTCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SLYHGWHNLHAGILAQLVLAQWS*AACPLC
Trigger: ACACAGAGGACAGGCTGCTCAGCTCCACTGTGCAAG...GACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp GCCTTTGCCAGCGTAATTCTTGTCTTTGCCACGTCTAGAGGGGTGGTGACTGCACCAGCGCTTTACAGTTaGCCCTTCTCTCCCCAGATG +
Preference number: 4 (lower is better)
Translates to: AFASVILVFATSRGVVTAPALYS*PFSPQM
Trigger: CATCTGGGGAGAGAAGGGTCAACTGTAAAGCGCTGG...TGCAGTCACCACCCCTCTAGACGTGGCAAAGACAAGAATTACGCTGGCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp CCCGGACTCCACAGAGCTACAGCCTGCATCTTCATTAACTTCAGGCAGTCCAGAATGCTCAGCCACAGGTaGCAAATGAGGACCCCCTCA +
Preference number: 4 (lower is better)
Translates to: PGLHRATACIFINFRQSRMLSHR*QMRTPS
Trigger: TGAGGGGGTCCTCATTTGTCACCTGTGGCTGAGCAT...TCTGGACTGCCTGAAGTTAATGAAGATGCAGGCTGTAGCTCTGTGGAGTCCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp GTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGACTTCCGGGACCACGTaGCGTAGAACCACAACAACT +
Preference number: 4 (lower is better)
Translates to: VFSTGAYSSDSCSAEEGLTSGTT*RRTTTT
Trigger: AGTTGTTGTGGTTCTACGTCACGTGGTCCCGGAAGT...CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTAGAAGCAGATACCTGTaGCCTCTGCTTAACCACTTC +
Preference number: 4 (lower is better)
Translates to: AQRKRVCTAGPSLDRSGGRSRYL*PLLNHF
Trigger: GAAGTGGTTAAGCAGAGGGCACAGGTATCTGCTTCT...ACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTAGCGGCAAATCCACCTaGAAAAGCTCCACAGACTGC +
Preference number: 4 (lower is better)
Translates to: YSSDSCSAEEGLHCRPLSSGKST*KSSTDC
Trigger: GCAGTCTGTGGAGCTTTTGCAGGTGGATTTGCCGCT...AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGCTGGAGCCAGCCTTTaGCAGCGTAATTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: FRQLLSGRGFALQAPLLTAGASL*QRNSCL
Trigger: AAGACAAGAATTACGCTGGCAAAGGCTGGCTCCAGC...TGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGCTGGAGCCAGCCTTTaGCAGCGTAATTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GRGFALQAPLLTEVEVRLAGASL*QRNSCL
Trigger: AAGACAAGAATTACGCTGGCAAAGGCTGGCTCCAGC...AAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTGCGCTGGAGCCAGCCTTTaGCAGCGTAATTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: VCTAGPSLDRSGGEACLCAGASL*QRNSCL
Trigger: AAGACAAGAATTACGCTGGCAAAGGCTGGCTCCAGC...GCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGGACCGCCAGACCCCATaGAGGACAGAGAGCACATTC +
Preference number: 4 (lower is better)
Translates to: FRVPPQTPFSSLSSLAYRDRQTP*RTESTF
Trigger: GAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTC...CCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCCAATCCCAGACTGATGGCTaGCATTCGAGGGAAGACACC +
Preference number: 4 (lower is better)
Translates to: EYRHRPRFLLLALWHTGQSQTDG*HSREDT
Trigger: GGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGA...TTGGCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTCCCAGACTGATGGCTaGCATTCGAGGGAAGACACC +
Preference number: 4 (lower is better)
Translates to: AGILAQLVFSTGAYSSDSSQTDG*HSREDT
Trigger: GGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGA...GCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACTCCCAGACTGATGGCTaGCATTCGAGGGAAGACACC +
Preference number: 4 (lower is better)
Translates to: SGIQANDFIPASLYHGWHSQTDG*HSREDT
Trigger: GGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGA...GTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGTGAGGCTTGTCTCTaGTTCAAGGACTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ALGPIVQTAAQRKRVCTAGEACL*FKDSFC
Trigger: GCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC...TGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGTATAGTTCAGACAGCTaGTCAGCGGAAGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: QLLSGRGFALQAPLLTEVYSSDS*SAEEGL
Trigger: CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA...CACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp AGAAACACCCACATACACAACTCTTCCCCAAGTCTCCTTTTCCCAAACAAACAAACCAGCCACCAGCGCTaGCACGAACCCCGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: RNTHIHNSSPSLLFPNKQTSHQR*HEPRPV
Trigger: GACCGGCCGGGGTTCGTGGCAGCGCTGGTGGCTGGT...TTGTTTGTTTGGGAAAAGGAGACTTGGGGAAGAGTTGTGTATGTGGGTGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354883.11
ENST00000633701.1
CDS-3UTR GCA 90 bp CAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGCACTTGAGTTGCAGCTaGTTTCTCTCACACACCACA +
Preference number: 4 (lower is better)
Translates to: QRKRVCTAGPSLDRSGGEHLSCS*FLSHTT
Trigger: TGTGGTGTGTGAGAGAAAGCAGCTGCAACTCAAGTG...CTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
CDS-3UTR GCA 90 bp AACAGCATGTATACAAGCCACACACAACAACTCACAGAAGCTCACAAGCCTCCCATGGCTCACCCACCGTaGCCTCCTGCACGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: NSMYTSHTQQLTEAHKPPMAHPP*PPARSQ
Trigger: CTGGCTTCGTGCAGGAGGGCACGGTGGGTGAGCCAT...GGGAGGCTTGTGAGCTTCTGTGAGTTGTTGTGTGTGGCTTGTATACATGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483224.5
ENST00000632740.1
CDS-3UTR GCA 90 bp GAGGCTTGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTTGCCGACCGACCCTCTaGAAAGGGAGGCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: EACLCFKDSFCQLPTASCCRPTL*KGRPLL
Trigger: AAGCAGTGGCCTCCCTTTGCAGAGGGTCGGTCGGCA...ACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR GCA 90 bp ATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAATGAGGAGGTGGCACTaGCAGCTGAGACGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: ILAQLVFSTGAYSSDSCSMRRWH*QLRRPK
Trigger: CTTCGGGCGTCTCAGCTGGCAGTGCCACCTCCTCAT...TGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR GCA 90 bp AGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCCCGGGAAACAGAGGGTaGCACTGCTGTTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: SLYHGWHNLHAGILAQLVPGNRG*HCCWHQ
Trigger: TTGGTGCCAACAGCAGTGGCACCCTCTGTTTCCCGG...GACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCCAAGGCTTTCCGTGTTGCTaGCAGATAGGCCACATGGTG +
Preference number: 4 (lower is better)
Translates to: EYRHRPRFLLLALWHTGQGFPCC*QIGHMV
Trigger: CACCATGTGGCCTATCTGGCAGCAACACGGAAAGCC...TTGGCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATGCTCAGCAGTCCCCTCAGACAGCTaGGCTGTTGAACAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: PETTMAMVGKDIRFTCSAVPSDS*AVEQWL
Trigger: TAGCCACTGTTCAACAGCGCAGCTGTCTGAGGGGAC...TGCTGAGCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GAGCTGCTTAAACGGTCAAGTGGGGGTCTGACAGGTTCGTTCTTTCCTTGTAGGGGCCAGCTGCTTGTTTaGCCCATGGGTATTGTCCCC +
Preference number: 4 (lower is better)
Translates to: ELLKRSSGGLTGSFFPCRGQLLV*PMGIVP
Trigger: GGGGACAATACCCATGGGGCAAACAAGCAGCTGGCC...CCTACAAGGAAAGAACGAACCTGTCAGACCCCCACTTGACCGTTTAAGCAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp AGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCCGTCTTTCCTGGGTGTaGACATGGCCTTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: SLYHGWHNLHAGILAQLVRLSWV*TWPCTC
Trigger: GCAGGTGCAAGGCCATGTGCACACCCAGGAAAGACG...GACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GGTCCTGCCCCGAGTGCCAAGGGTCGCTCTACCCCAGTAACCACGATAGAATGCGTTTGTGTTGGGGTGTaGCATCACTTCCTATTTGTG +
Preference number: 4 (lower is better)
Translates to: GPAPSAKGRSTPVTTIECVCVGV*HHFLFV
Trigger: CACAAATAGGAAGTGATGGCACACCCCAACACAAAC...GCATTCTATCGTGGTTACTGGGGTAGAGCGACCCTTGGCACTCGGGGCAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGTCCTCCCCCAGGATTTaGTGCTGTTGCTGTTTATTG +
Preference number: 4 (lower is better)
Translates to: QLLSGRGFALQAPLLTEVSSPRI*CCCCLL
Trigger: CAATAAACAGCAACAGCAGCAAATCCTGGGGGAGGA...CACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCCAATTCATGCCATTCTCCTaGCTCGGCCTCCCTAGTAGC +
Preference number: 4 (lower is better)
Translates to: EYRHRPRFLLLALWHTGQFMPFS*LGLPSS
Trigger: GCTACTAGGGAGGCCGAGGCAGGAGAATGGCATGAA...TTGGCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp TCAGGCAGTCCAGAGCGCGCGGAAGCCCAGTACTTGCTTGTTTCCAATGGCCACCTTAACCACTTCAGATaGAACTCGAATCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SGSPERAEAQYLLVSNGHLNHFR*NSNQAG
Trigger: GCCTGCCTGATTCGAGTTCCATCTGAAGTGGTTAAG...GTGGCCATTGGAAACAAGCAAGTACTGGGCTTCCGCGCGCTCTGGACTGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp ATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCATCCCATCAGCAGTGCTaGAGCCAGCCTTTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: ILAQLVFSTGAYSSDSCSSHQQC*SQPLPA
Trigger: CGCTGGCAAAGGCTGGCTCCAGCACTGCTGATGGGA...TGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp AATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCCCATCAGCAGTGCTaGAGCCAGCCTTTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: NLHAGILAQLVFSTGAYSSHQQC*SQPLPA
Trigger: CGCTGGCAAAGGCTGGCTCCAGCACTGCTGATGGGA...ACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp TTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACAGCCTATACCACGGATaGCACAATCTCCATGCCGGT +
Preference number: 4 (lower is better)
Translates to: FSTGAYSSDSCSAEEGLHSLYHG*HNLHAG
Trigger: ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT...GTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CAAAGCTGGCCCAGGCCCTCCTTTCAGTCTGACATGAGAATGGCGAGAATGGCTAGCCTATACCACGGATaGCACAATCTCCATGCCGGT +
Preference number: 4 (lower is better)
Translates to: QSWPRPSFQSDMRMARMASLYHG*HNLHAG
Trigger: ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT...AGCCATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGCCTGGGCCAGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp TGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTAGCCTATACCACGGATaGCACAATCTCCATGCCGGT +
Preference number: 4 (lower is better)
Translates to: WSSALGPIVQTAAQRKRVSLYHG*HNLHAG
Trigger: ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT...AACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCACCACAGGGGGCGCTaGACACATCTCTGTAAAATA +
Preference number: 4 (lower is better)
Translates to: PIVQTAAQRKRVCTAGPSHHRGR*THLCKI
Trigger: TATTTTACAGAGATGTGTCCAGCGCCCCCTGTGGTG...AGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp TTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACACACCACAGGGGGCGCTaGACACATCTCTGTAAAATA +
Preference number: 4 (lower is better)
Translates to: FRQLLSGRGFALQAPLLTHHRGR*THLCKI
Trigger: TATTTTACAGAGATGTGTCCAGCGCCCCCTGTGGTG...TGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp GTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTGCCACCACAGGGGGCGCTaGACACATCTCAAACTTATT +
Preference number: 4 (lower is better)
Translates to: VCTAGPSLDRSGGEACLCHHRGR*THLKLI
Trigger: AATAAGTTTGAGATGTGTCCAGCGCCCCCTGTGGTG...GCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CCACTGTCTCCTATCCTTTACCGACGGCTTGTGTGTTTGTGTTGGGGTGTGCCAGGCTGCGAGGAAGCTTaGGTTCAAGCGTCACTCATC +
Preference number: 4 (lower is better)
Translates to: PLSPILYRRLVCLCWGVPGCEEA*VQASLI
Trigger: GATGAGTGACGCTTGAACCCAAGCTTCCTCGCAGCC...TGGCACACCCCAACACAAACACACAAGCCGTCGGTAAAGGATAGGAGACAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp GCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCGGCTGCGAGGAAGCTTaGGTTCAAGCGTCACTCATC +
Preference number: 4 (lower is better)
Translates to: AGILAQLVFSTGAYSSDSGCEEA*VQASLI
Trigger: GATGAGTGACGCTTGAACCCAAGCTTCCTCGCAGCC...GCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp ACCCAGCCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATGCAAACCACCATGGCTATaGTGGGCAAGGACATCCGGT +
Preference number: 4 (lower is better)
Translates to: TQPETTMAMVGKDIRFTCKPPWL*WARTSG
Trigger: ACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTT...GCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGGCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp TTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACAGCCAGAAACCACCATaGCTATGGTGGGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: FSTGAYSSDSCSAEEGLHSQKPP*LWWART
Trigger: TGTCCTTGCCCACCATAGCCATGGTGGTTTCTGGCT...GTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp TGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTAACTCTTACGGCATCTaGTTGGTGGGGCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: WSSALGPIVQTAAQRKRVNSYGI*LVGLRM
Trigger: CATCCTCAGCCCCACCAACCAGATGCCGTAAGAGTT...AACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp GGTCCTGCCCCGAGTGCCAAGGGTCGCTCTACCCCAGTAACCACGATAGAATGCTGCGCTGTTGAACAGTaGCTACTGATTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: GPAPSAKGRSTPVTTIECCAVEQ*LLIVVV
Trigger: GACTACAACAATCAGTAGCCACTGTTCAACAGCGCA...GCATTCTATCGTGGTTACTGGGGTAGAGCGACCCTTGGCACTCGGGGCAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGGGTTCAACCTTGCACCTGCATGTaGCTGTCTAGATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PISTGKRGRRGCEEAWVQPCTCM*LSRSPG
Trigger: TCCTGGGGATCTAGACAGCCACATGCAGGTGCAAGG...TTGAACCCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp GTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGGCCCGTGTTAATGGCTaGGCAACCATGAGCATGAAC +
Preference number: 4 (lower is better)
Translates to: VFSTGAYSSDSCSAEEGLARVNG*ATMSMN
Trigger: GTTCATGCTCATGGTTGCCCAGCCATTAACACGGGC...CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR TCA 90 bp TTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGTGGCATACAGGCCAATaGCTTCATACCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LAQLVFSTGAYSSDSCSAWHTGQ*LHTSQP
Trigger: AGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCA...CGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR TCA 90 bp TCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCTGGCATACAGGCCAATaGCTTCATACCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLAYRPMTSYQPAYTTDGWHTGQ*LHTSQP
Trigger: AGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCA...GCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR TCA 90 bp TCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCGCCCTCCTTTCAGTCTaGCATGAGAATGGCGAGAAT +
Preference number: 4 (lower is better)
Translates to: SSALGPIVQTAAQRKRVCALLSV*HENGEN
Trigger: ATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGC...GCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp TCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCGGTCAAGTGGGGGTCTaGCAGGTTCGTTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SEYRHRPRFLLLALWHTGGQVGV*QVRSFL
Trigger: AAGGAAAGAACGAACCTGTCAGACCCCCACTTGACC...GCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp GTAATTCTTGTCTTTGCCACGTCTAGAGGGGTGGTGACTGCAGCGGCAAATCCACCCCAGATGACTTCCTaGAGCCACAGATCATCACCC +
Preference number: 4 (lower is better)
Translates to: VILVFATSRGVVTAAANPPQMTS*SHRSSP
Trigger: GGGTGATGATCTGTGGCTTCAGGAAGTCATCTGGGG...TGGATTTGCCGCTGCAGTCACCACCCCTCTAGACGTGGCAAAGACAAGAATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp ATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCCTGACTGTTTTGTGTaGAAGTCAGCAGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: MAQSPCRYLSTTGLQHWGPDCFV*KSAGRA
Trigger: GGCTCTGCCTGCTGACTTTCACACAAAACAGTCAGG...GCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp ATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCAGATCTCTGCAGTCATaGCCAGTGGTGCCTGACTGT +
Preference number: 4 (lower is better)
Translates to: MAQSPCRYLSTTGLQHWGRSLQS*PVVPDC
Trigger: ACAGTCAGGCACCACTGGTCATGACTGCAGAGATCT...GCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp CAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTAGAGCAGCGGTAGAATaGGGCCGGCGTGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: QPIPRMAQSPCRYLSTTGRAAVE*GRRDSE
Trigger: TTCAGAATCACGCCGGCCTCATTCTACCGCTGCTCT...ACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGGGTTCAAAGCGGCAAATCCACCTaGAAAAGCTCCACAGACTGC +
Preference number: 4 (lower is better)
Translates to: PISTGKRGRRGCEEAWVQSGKST*KSSTDC
Trigger: GCAGTCTGTGGAGCTTTTGCAGGTGGATTTGCCGCT...TTGAACCCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp AGCTCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATCATTCCCATCAGCAGTaGTGGAGCCAGCCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SSLAYRPMTSYQPAYTTDHSHQQ*WSQPLP
Trigger: TGGCAAAGGCTGGCTCCAGCACTGCTGATGGGAATG...ATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GGTGAGGCTTGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCCATTCCCATCAGCAGTaGTGGAGCCAGCCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GEACLCFKDSFCQLPTASHSHQQ*WSQPLP
Trigger: TGGCAAAGGCTGGCTCCAGCACTGCTGATGGGAATG...GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
CDS-3UTR GCA 90 bp CTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCACATTCCCATCAGCAGTaGTGGAGCCAGCCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LHAGILAQLVFSTGAYSSHSHQQ*WSQPLP
Trigger: TGGCAAAGGCTGGCTCCAGCACTGCTGATGGGAATG...TGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp AATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTCATTCCCATCAGCAGTaGTGGAGCCAGCCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: NDFIPASLYHGWHNLHAGHSHQQ*WSQPLP
Trigger: TGGCAAAGGCTGGCTCCAGCACTGCTGATGGGAATG...ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGTCCCAGACTGATGGCTaGCATTCGAGGGAAGACACC +
Preference number: 4 (lower is better)
Translates to: FRVPPQTPFSSLSSLAYRSQTDG*HSREDT
Trigger: GGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGA...CCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCATCCCAGACTGATGGCTaGCATTCGAGGGAAGACACC +
Preference number: 4 (lower is better)
Translates to: LHAGILAQLVFSTGAYSSSQTDG*HSREDT
Trigger: GGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGA...TGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTGGTGAGGCTTGTCTCTaGTTCAAGGACTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: YSSDSCSAEEGLHCRPLSGEACL*FKDSFC
Trigger: GCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC...AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACGGTGAGGCTTGTCTCTaGTTCAAGGACTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: FSTGAYSSDSCSAEEGLHGEACL*FKDSFC
Trigger: GCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC...GTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGGGTGAGGCTTGTCTCTaGTTCAAGGACTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: VFSTGAYSSDSCSAEEGLGEACL*FKDSFC
Trigger: GCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC...CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGGGTGAGGCTTGTCTCTaGTTCAAGGACTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: HNWSSALGPIVQTAAQRKGEACL*FKDSFC
Trigger: GCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC...CTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp ATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCACAGCGGAAGAGGGTTTaGACTGCAGGCCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: ILAQLVFSTGAYSSDSCSQRKRV*TAGPSL
Trigger: AAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG...TGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp AATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTCAGCGGAAGAGGGTTTaGACTGCAGGCCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: NLHAGILAQLVFSTGAYSQRKRV*TAGPSL
Trigger: AAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG...ACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTGCTTCAAGGTATAGTTCAGACAGCTaGTCAGCGGAAGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LQAPLLTEVEVRLVSASRYSSDS*SAEEGL
Trigger: CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA...CCTTGAAGCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
CDS-3UTR GCA 90 bp AGCTGGCCCAGGCCCTCCTTTCAGTCTGACATGAGAATGGCGAGAATGGCTCACTATAGTTCAGACAGCTaGTCAGCGGAAGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: SWPRPSFQSDMRMARMAHYSSDS*SAEEGL
Trigger: CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA...GTGAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGCCTGGGCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp TTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACACACTTGAGTTGCAGCTaGTTTCTCTCACACACCACA +
Preference number: 4 (lower is better)
Translates to: FRQLLSGRGFALQAPLLTHLSCS*FLSHTT
Trigger: TGTGGTGTGTGAGAGAAAGCAGCTGCAACTCAAGTG...TGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
CDS-3UTR GCA 90 bp CTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTGCTTCAAGGCACTTGAGTTGCAGCTaGTTTCTCTCACACACCACA +
Preference number: 4 (lower is better)
Translates to: LQAPLLTEVEVRLVSASRHLSCS*FLSHTT
Trigger: TGTGGTGTGTGAGAGAAAGCAGCTGCAACTCAAGTG...CCTTGAAGCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000634032.1
CDS-3UTR GCA 90 bp TTGCCTTCTGCTGAATCCACCATCAGGTGGCAGGAAATGAAAGATCAGATACAGATGGCTCACCCACCGTaGCCTCCTGCACGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LPSAESTIRWQEMKDQIQMAHPP*PPARSQ
Trigger: CTGGCTTCGTGCAGGAGGGCACGGTGGGTGAGCCAT...CTGTATCTGATCTTTCATTTCCTGCCACCTGATGGTGGATTCAGCAGAAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp CGGGTCGTATGCAGTGACTGCAACACCGAAGTGGACTGTTACTCCAGGGGACAAAACAGAGGGTGCCACTaGTGTTGGCACCAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: RVVCSDCNTEVDCYSRGQNRGCH*CWHQKA
Trigger: AGCTTTTTGGTGCCAACAGCAGTGGCACCCTCTGTT...TTGTCCCCTGGAGTAACAGTCCACTTCGGTGTTGCAGTCACTGCATACGACCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp AGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTAGGTGGGTTGGGAGCTaGTTAAACGGTCAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SQPIPRMAQSPCRYLSTTRWVGS*LNGQVG
Trigger: CCCCACTTGACCGTTTAAGCAGCTCCCAACCCACCT...AGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCGGTGGCCGGGTCGTATaGAGTGACTGCAACACCGAA +
Preference number: 4 (lower is better)
Translates to: LYHGWHNLHAGILAQLVFGGRVV*SDCNTE
Trigger: TTCGGTGTTGCAGTCACTGCATACGACCCGGCCACC...GAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGGTCAGATGTCCATGGTaGAACTCTTACGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: VFSTGAYSSDSCSAEEGLVRCPW*NSYGIW
Trigger: CCAGATGCCGTAAGAGTTGCACCATGGACATCTGAC...CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp AGCTCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGTGTGCACATGGCCTTaGACCTGCATGTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SSLAYRPMTSYQPAYTTDVCTWP*TCMWLS
Trigger: AGACAGCCACATGCAGGTGCAAGGCCATGTGCACAC...ATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp AGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCTTACCTCGGTTTCCTaGAGCAGCGTTGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RPMTSYQPAYTTDGTISMLTSVS*SSVVCS
Trigger: GCTGCACACAACGCTGCTGCAGGAAACCGAGGTAAG...CATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CCA 90 bp GGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTCTTAACCACTTCAGATaGAACTCGAATCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GRGFALQAPLLTEVEVRLLNHFR*NSNQAG
Trigger: GCCTGCCTGATTCGAGTTCCATCTGAAGTGGTTAAG...AAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp TTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCATAAGTCCCATCAGCAGTGCTaGAGCCAGCCTTTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: FKDSFCQLPTASCAFGHKSHQQC*SQPLPA
Trigger: CGCTGGCAAAGGCTGGCTCCAGCACTGCTGATGGGA...CTTATGACCGAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
CDS-3UTR CCA 90 bp GTTCTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCCCATCAGCAGTGCTaGAGCCAGCCTTTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: VLRKLFRVPPQTPFSSLSSHQQC*SQPLPA
Trigger: CGCTGGCAAAGGCTGGCTCCAGCACTGCTGATGGGA...GCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp ATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCAGCCTATACCACGGATaGCACAATCTCCATGCCGGT +
Preference number: 4 (lower is better)
Translates to: MAQSPCRYLSTTGLQHWGSLYHG*HNLHAG
Trigger: ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT...GCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp GCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCAGCCTATACCACGGATaGCACAATCTCCATGCCGGT +
Preference number: 4 (lower is better)
Translates to: AGILAQLVFSTGAYSSDSSLYHG*HNLHAG
Trigger: ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT...GCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCACTGCCTTTTCAAAGCTaGCCCAGGCCCTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LHAGILAQLVFSTGAYSSLPFQS*PRPSFQ
Trigger: CTGAAAGGAGGGCCTGGGCCAGCTTTGAAAAGGCAG...TGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp AATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTCTGCCTTTTCAAAGCTaGCCCAGGCCCTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: NDFIPASLYHGWHNLHAGLPFQS*PRPSFQ
Trigger: CTGAAAGGAGGGCCTGGGCCAGCTTTGAAAAGGCAG...ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp TCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCGGGTGCCACTGCTGTTaGCACCAAAAAGCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: SSALGPIVQTAAQRKRVCGCHCC*HQKARF
Trigger: AAACCTAGCTTTTTGGTGCCAACAGCAGTGGCACCC...GCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTCTGTCTTCTAACAGGTaGGTTGGGAGCTGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: LVFSTGAYSSDSCSAEEGLSSNR*VGSCLN
Trigger: GTTTAAGCAGCTCCCAACCCACCTGTTAGAAGACAG...ACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTGCTTCAAGGACTCTAACCCATCTTTaGCGCTGTCCTTCAGAACAC +
Preference number: 4 (lower is better)
Translates to: LQAPLLTEVEVRLVSASRTLTHL*RCPSEH
Trigger: GTGTTCTGAAGGACAGCGCCAAAGATGGGTTAGAGT...CCTTGAAGCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp AATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTAGCCTGTCCTCTGTGTaGGGACGAAGACTCCCACAG +
Preference number: 4 (lower is better)
Translates to: NLHAGILAQLVFSTGAYSSLSSV*GRRLPQ
Trigger: CTGTGGGAGTCTTCGTCCCCACACAGAGGACAGGCT...ACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CCACTGTCTCCTATCCTTTACCGACGGCTTGTGTGTTTGTGTTGGGGTGTGCCAAAACCACCATGGCTATaGTGGGCAAGGACATCCGGT +
Preference number: 4 (lower is better)
Translates to: PLSPILYRRLVCLCWGVPKPPWL*WARTSG
Trigger: ACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTT...TGGCACACCCCAACACAAACACACAAGCCGTCGGTAAAGGATAGGAGACAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTTGCAGTCATGACCAGTaGTGCCTGACTGTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: PIVQTAAQRKRVCTAGPSCSHDQ*CLTVLC
Trigger: ACACAAAACAGTCAGGCACCACTGGTCATGACTGCA...AGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp ATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGAGGCTACCATGGAGCTaGGGAGGGAAGAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: IPRMAQSPCRYLSTTGLQRLPWS*GGKNGA
Trigger: AGCCCCATTCTTCCCTCCCCAGCTCCATGGTAGCCT...CTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp TTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACACTTGTGTGTTTGTGTTaGGGTGTGCCATCACTTCCT +
Preference number: 4 (lower is better)
Translates to: FRQLLSGRGFALQAPLLTLVCLC*GVPSLP
Trigger: AGGAAGTGATGGCACACCCCAACACAAACACACAAG...TGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp CTTGTTAGTCAAGGTCTAAAATCCCTAAGTGTGGTGACCTTTCCATTTCATCCTTCCTGCCAGCCCCTGTaGCCGCCAGACCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: LVSQGLKSLSVVTFPFHPSCQPL*PPDPMQ
Trigger: CTGCATGGGGTCTGGCGGTCACAGGGGCTGGCAGGA...AGGATGAAATGGAAAGGTCACCACACTTAGGGATTTTAGACCTTGACTAACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp GCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTGGCATACAGGCCAATaGCTTCATACCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: AYRPMTSYQPAYTTDGTIWHTGQ*LHTSQP
Trigger: AGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCA...GATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR TCA 90 bp GCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCATAAGCCCCCAGAAAGATGAATGGCATACAGGCCAATaGCTTCATACCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ANFQQQAVRSVISPQKDEWHTGQ*LHTSQP
Trigger: AGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCA...TTCATCTTTCTGGGGGCTTATGACCGAACGCACAGCTTGCTGTTGGAAGTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
CDS-3UTR TCA 90 bp GTAATTCTTGTCTTTGCCACGTCTAGAGGGGTGGTGACTGCAGCGGCAAATCCATGGCATACAGGCCAATaGCTTCATACCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VILVFATSRGVVTAAANPWHTGQ*LHTSQP
Trigger: AGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCA...TGGATTTGCCGCTGCAGTCACCACCCCTCTAGACGTGGCAAAGACAAGAATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000634032.1
CDS-3UTR TCA 90 bp GACTTTAGCAAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTGCATCTTCGCCCACCTAGTCACTTaGGTTGCAGCTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: DFSKVVSPGLHRATACIFAHLVT*VAAAFS
Trigger: AGAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGC...GAAGATGCAGGCTGTAGCTCTGTGGAGTCCGGGTGATACAACCTTGCTAAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp AGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGGCCCACCTAGTCACTTaGGTTGCAGCTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RPMTSYQPAYTTDGTISMAHLVT*VAAAFS
Trigger: AGAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGC...CATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
CDS-3UTR TCA 90 bp GAGGCTTGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTCCAGCGCTTTACAGTTaGCCCTTCTCTCCCCAGATG +
Preference number: 4 (lower is better)
Translates to: EACLCFKDSFCQLPTASCPALYS*PFSPQM
Trigger: CATCTGGGGAGAGAAGGGTCAACTGTAAAGCGCTGG...ACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp CTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCATGCTCAGCCACAGGTaGCAAATGAGGACCCCCTCA +
Preference number: 4 (lower is better)
Translates to: LYHGWHNLHAGILAQLVFMLSHR*QMRTPS
Trigger: TGAGGGGGTCCTCATTTGTCACCTGTGGCTGAGCAT...GAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp CAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTATGGTCTTGATCTCCTaGCCTCATGATCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QPIPRMAQSPCRYLSTTGMVLIS*PHDPPA
Trigger: GGCAGGAGGATCATGAGGTCAGGAGATCAAGACCAT...ACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp TCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCAGAAGCAGATACCTGTaGCCTCTGCTTAACCACTTC +
Preference number: 4 (lower is better)
Translates to: SSALGPIVQTAAQRKRVCRSRYL*PLLNHF
Trigger: GAAGTGGTTAAGCAGAGGGCACAGGTATCTGCTTCT...GCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp AGCTCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATAGCGGCAAATCCACCTaGAAAAGCTCCACAGACTGC +
Preference number: 4 (lower is better)
Translates to: SSLAYRPMTSYQPAYTTDSGKST*KSSTDC
Trigger: GCAGTCTGTGGAGCTTTTGCAGGTGGATTTGCCGCT...ATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGAGCGGCAAATCCACCTaGAAAAGCTCCACAGACTGC +
Preference number: 4 (lower is better)
Translates to: FRVPPQTPFSSLSSLAYRSGKST*KSSTDC
Trigger: GCAGTCTGTGGAGCTTTTGCAGGTGGATTTGCCGCT...CCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp AATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTAGCGGCAAATCCACCTaGAAAAGCTCCACAGACTGC +
Preference number: 4 (lower is better)
Translates to: NDFIPASLYHGWHNLHAGSGKST*KSSTDC
Trigger: GCAGTCTGTGGAGCTTTTGCAGGTGGATTTGCCGCT...ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCGGCAAATCCACCTaGAAAAGCTCCACAGACTGC +
Preference number: 4 (lower is better)
Translates to: HAGILAQLVFSTGAYSSDSGKST*KSSTDC
Trigger: GCAGTCTGTGGAGCTTTTGCAGGTGGATTTGCCGCT...GTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCGCTGGAGCCAGCCTTTaGCAGCGTAATTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: AGILAQLVFSTGAYSSDSAGASL*QRNSCL
Trigger: AAGACAAGAATTACGCTGGCAAAGGCTGGCTCCAGC...GCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCGCTGGAGCCAGCCTTTaGCAGCGTAATTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SEYRHRPRFLLLALWHTGAGASL*QRNSCL
Trigger: AAGACAAGAATTACGCTGGCAAAGGCTGGCTCCAGC...GCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGCTGGAGCCAGCCTTTaGCAGCGTAATTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LAQLVFSTGAYSSDSCSAAGASL*QRNSCL
Trigger: AAGACAAGAATTACGCTGGCAAAGGCTGGCTCCAGC...CGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp ATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATTCCCATCAGCAGTaGTGGAGCCAGCCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: IQANDFIPASLYHGWHNLHSHQQ*WSQPLP
Trigger: TGGCAAAGGCTGGCTCCAGCACTGCTGATGGGAATG...GAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCCATTCCCATCAGCAGTaGTGGAGCCAGCCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LYHGWHNLHAGILAQLVFHSHQQ*WSQPLP
Trigger: TGGCAAAGGCTGGCTCCAGCACTGCTGATGGGAATG...GAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTTTCAAGGACTCTTTCTaGCAACTTCCAACAGCAAGC +
Preference number: 4 (lower is better)
Translates to: PIVQTAAQRKRVCTAGPSFKDSF*QLPTAS
Trigger: GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA...AGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCATTCAAGGACTCTTTCTaGCAACTTCCAACAGCAAGC +
Preference number: 4 (lower is better)
Translates to: ALGPIVQTAAQRKRVCTAFKDSF*QLPTAS
Trigger: GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA...TGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACATTCAAGGACTCTTTCTaGCAACTTCCAACAGCAAGC +
Preference number: 4 (lower is better)
Translates to: FRQLLSGRGFALQAPLLTFKDSF*QLPTAS
Trigger: GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA...TGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp ATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCGGTGAGGCTTGTCTCTaGTTCAAGGACTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: MAQSPCRYLSTTGLQHWGGEACL*FKDSFC
Trigger: GCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC...GCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCGGTGAGGCTTGTCTCTaGTTCAAGGACTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SEYRHRPRFLLLALWHTGGEACL*FKDSFC
Trigger: GCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC...GCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCAGCGGAAGAGGGTTTaGACTGCAGGCCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LRKLFRVPPQTPFSSLSSQRKRV*TAGPSL
Trigger: AAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG...AGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTATAGTTCAGACAGCTaGTCAGCGGAAGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: FSTGAYSSDSCSAEEGLHYSSDS*SAEEGL
Trigger: CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA...GTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTGCCCCAGAAAGAGTGCTTaGTATGCACCTGTAGTTCAA +
Preference number: 4 (lower is better)
Translates to: VCTAGPSLDRSGGEACLCPRKSA*YAPVVQ
Trigger: TTGAACTACAGGTGCATAGCAAGCACTCTTTCTGGG...GCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp GTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTTGAGTTGCAGCTaGTTTCTCTCACACACCACA +
Preference number: 4 (lower is better)
Translates to: VFSTGAYSSDSCSAEEGLHLSCS*FLSHTT
Trigger: TGTGGTGTGTGAGAGAAAGCAGCTGCAACTCAAGTG...CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
CDS-3UTR GCA 90 bp TCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCCCTAGTCACTTGAGTTaGAGCTGCTTTCTCTCACAC +
Preference number: 4 (lower is better)
Translates to: SSALGPIVQTAAQRKRVCPSHLS*SCFLSH
Trigger: GTGTGAGAGAAAGCAGCTGCAACTCAAGTGACTAGG...GCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
CDS-3UTR GCA 90 bp AGCTGGCCCAGGCCCTCCTTTCAGTCTGACATGAGAATGGCGAGAATGGCTCACCACATACTGTTTGTTTaGTCCAGGGCAGACAACACT +
Preference number: 4 (lower is better)
Translates to: SWPRPSFQSDMRMARMAHHILFV*SRADNT
Trigger: AGTGTTGTCTGCCCTGGAGCAAACAAACAGTATGTG...GTGAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGCCTGGGCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp TCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCGCAAAGGGAGGCCACTaGTTTGCTCTTGCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: SSALGPIVQTAAQRKRVCAKGGH*FALARK
Trigger: TTTTCTTGCAAGAGCAAAGCAGTGGCCTCCCTTTGC...GCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR GCA 90 bp CCAAGTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCATGGGACTTCTTTAGCTaGTCTATTCAAAAGCAGTTA +
Preference number: 4 (lower is better)
Translates to: PSAPNGPEPGGSDQEHSPWDFFS*SIQKQL
Trigger: TAACTGCTTTTGAATAGAGCAGCTAAAGAAGTCCCA...TGGAGAATGCTCTTGGTCACTCCCACCCGGCTCCGGGCCATTTGGCGCACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATGCTCAGCAAACAGAGGGTGCCACTaGTGTTGGCACCAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: PETTMAMVGKDIRFTCSANRGCH*CWHQKA
Trigger: AGCTTTTTGGTGCCAACAGCAGTGGCACCCTCTGTT...TGCTGAGCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GGTGAGGCTTGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCCGGAAGCCCAGTACTTaGTTGTTTCCAATGGCCACC +
Preference number: 4 (lower is better)
Translates to: GEACLCFKDSFCQLPTASRKPST*LFPMAT
Trigger: GGTGGCCATTGGAAACAAGCAAGTACTGGGCTTCCG...GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CCACTGTCTCCTATCCTTTACCGACGGCTTGTGTGTTTGTGTTGGGGTGTGCCAGTCGTATGCAGTGACTaGAACACCGAAGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: PLSPILYRRLVCLCWGVPVVCSD*NTEVDC
Trigger: ACAGTCCACTTCGGTGTTGCAGTCACTGCATACGAC...TGGCACACCCCAACACAAACACACAAGCCGTCGGTAAAGGATAGGAGACAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp ATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGGTCCCCTCAGACAGCTaGGCTGTTGAACAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: IPRMAQSPCRYLSTTGLQVPSDS*AVEQWL
Trigger: TAGCCACTGTTCAACAGCGCAGCTGTCTGAGGGGAC...CTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTTCCCCCAGGATTTGCTaGTGTTGCTGTTTATTGTTA +
Preference number: 4 (lower is better)
Translates to: AQRKRVCTAGPSLDRSGGSPRIC*CCCLLL
Trigger: TAACAATAAACAGCAACAGCAGCAAATCCTGGGGGA...ACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGTTCAACTCATGGCCTTaGTTTCTCAGATCCCGCTAC +
Preference number: 4 (lower is better)
Translates to: HNWSSALGPIVQTAAQRKFNSWP*FLRSRY
Trigger: GTAGCGGGATCTGAGAAAGCAAGGCCATGAGTTGAA...CTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CCA 90 bp AGACTGATGGCTGCCATTCGAGGGAAGACACCTGCAAATAATCCTGCCAGCCCCCTTAACCACTTCAGATaGAACTCGAATCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RLMAAIRGKTPANNPASPLNHFR*NSNQAG
Trigger: GCCTGCCTGATTCGAGTTCCATCTGAAGTGGTTAAG...GGGGCTGGCAGGATTATTTGCAGGTGTCTTCCCTCGAATGGCAGCCATCAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000634032.1
CDS-3UTR CCA 90 bp CAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGCCTCGATACAACCCTTaGATACCCTCTTCATATAAG +
Preference number: 4 (lower is better)
Translates to: QRKRVCTAGPSLDRSGGEPRYNP*IPSSYK
Trigger: CTTATATGAAGAGGGTATCCAAGGGTTGTATCGAGG...CTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp AGCTCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATAGCCTATACCACGGATaGCACAATCTCCATGCCGGT +
Preference number: 4 (lower is better)
Translates to: SSLAYRPMTSYQPAYTTDSLYHG*HNLHAG
Trigger: ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT...ATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp TTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGCCTTACTAAATCCTTaGGGACTCTGCAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: LAQLVFSTGAYSSDSCSAALLNP*GLCSLV
Trigger: AACCAGGCTGCAGAGTCCCCAAGGATTTAGTAAGGC...CGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354883.11
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAGCCTTACTAAATCCTTaGGGACTCTGCAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: LAYRPMTSYQPAYTTDGTALLNP*GLCSLV
Trigger: AACCAGGCTGCAGAGTCCCCAAGGATTTAGTAAGGC...TGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354883.11
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CCA 90 bp GAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCCAACACCACAGGGGGCGCTaGACACATCTCTGTAAAATA +
Preference number: 4 (lower is better)
Translates to: EYRHRPRFLLLALWHTGQHHRGR*THLCKI
Trigger: TATTTTACAGAGATGTGTCCAGCGCCCCCTGTGGTG...TTGGCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp TTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTTGCAAGAAAATCCCTaGTATATGGTCCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: FSTGAYSSDSCSAEEGLHLQENP*YMVPCQ
Trigger: CTGGCAGGGGACCATATACCAGGGATTTTCTTGCAA...GTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR CCA 90 bp GCTGCCATTCGAGGGAAGACACCTGCAAATAATCTACTTCATGTCCTCCAGATCATCAGGATGAGGAGGTaGCACTGCCAGCTGAGACGC +
Preference number: 4 (lower is better)
Translates to: AAIRGKTPANNLLHVLQIIRMRR*HCQLRR
Trigger: GCGTCTCAGCTGGCAGTGCCACCTCCTCATCCTGAT...GATCTGGAGGACATGAAGTAGATTATTTGCAGGTGTCTTCCCTCGAATGGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR CCA 90 bp TTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGACCAGAGGGCAACTTaGGACTTCTTTAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LAQLVFSTGAYSSDSCSADQRAT*DFFSCS
Trigger: AGAGCAGCTAAAGAAGTCCCAAGTTGCCCTCTGGTC...CGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp AGACTGATGGCTGCCATTCGAGGGAAGACACCTGCAAATAATCCTGCCAGCCCCGTTGTAACTCCCATGTaGAGTATCAGTCGCTCACAG +
Preference number: 4 (lower is better)
Translates to: RLMAAIRGKTPANNPASPVVTPM*SISRSQ
Trigger: CTGTGAGCGACTGATACTCCACATGGGAGTTACAAC...GGGGCTGGCAGGATTATTTGCAGGTGTCTTCCCTCGAATGGCAGCCATCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCAACTGCAACACCGAAGTaGACTGTTACTCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LLQGLFLPTSNSKLCVRSTATPK*TVTPGD
Trigger: GTCCCCTGGAGTAACAGTCCACTTCGGTGTTGCAGT...TGACCGAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp AGCTCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATACTGCAACACCGAAGTaGACTGTTACTCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: SSLAYRPMTSYQPAYTTDTATPK*TVTPGD
Trigger: GTCCCCTGGAGTAACAGTCCACTTCGGTGTTGCAGT...ATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp GTTGTAGTCATGTGCCCTGGGGCTAGGGCTTCTCCTGCTCGGCAAACTAGATCAACTCTAACCCATCTTTaGCGCTGTCCTTCAGAACAC +
Preference number: 4 (lower is better)
Translates to: VVVMCPGARASPARQTRSTLTHL*RCPSEH
Trigger: GTGTTCTGAAGGACAGCGCCAAAGATGGGTTAGAGT...TGATCTAGTTTGCCGAGCAGGAGAAGCCCTAGCCCCAGGGCACATGACTACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp AGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCCCACCATGGCTATGGTaGGCAAGGACATCCGGTTTA +
Preference number: 4 (lower is better)
Translates to: SLYHGWHNLHAGILAQLVPPWLW*ARTSGL
Trigger: TAAACCGGATGTCCTTGCCCACCATAGCCATGGTGG...GACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAGTTTCAAGGCTACCATaGAGCTGGGGAGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: LAYRPMTSYQPAYTTDGTVSRLP*SWGGKN
Trigger: ATTCTTCCCTCCCCAGCTCCATGGTAGCCTTGAAAC...TGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCCCTTGCACCTGCATGTaGCTGTCTAGATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LYHGWHNLHAGILAQLVFPCTCM*LSRSPG
Trigger: TCCTGGGGATCTAGACAGCCACATGCAGGTGCAAGG...GAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACGCCCGTGTTAATGGCTaGGCAACCATGAGCATGAAC +
Preference number: 4 (lower is better)
Translates to: HAGILAQLVFSTGAYSSDARVNG*ATMSMN
Trigger: GTTCATGCTCATGGTTGCCCAGCCATTAACACGGGC...GTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCCGAGCAAAAGATCCGTaGCCGAGATCCAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LYHGWHNLHAGILAQLVFRAKDP*PRSRRE
Trigger: CTCTCTCCTGGATCTCGGCCACGGATCTTTTGCTCG...GAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR TCA 90 bp GCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCACCAGCATATATTCCATaGAAACCACCAGCCTTACTA +
Preference number: 4 (lower is better)
Translates to: ALGPIVQTAAQRKRVCTAPAYIP*KPPALL
Trigger: TAGTAAGGCTGGTGGTTTTCATGGAATATATGCTGG...TGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354883.11
ENST00000633701.1
ENST00000676754.1
CDS-3UTR TCA 90 bp ATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCATCTTGCCTTCTGCTaGATCCACCATCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: IPRMAQSPCRYLSTTGLQHLAFC*IHHQVA
Trigger: TGCCACCTGATGGTGGATTCAGCAGAAGGCAAGATG...CTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp ATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCGCCCACCTAGTCACTTaGGTTGCAGCTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: IQANDFIPASLYHGWHNLAHLVT*VAAAFS
Trigger: AGAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGC...GAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
CDS-3UTR TCA 90 bp CTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCGGTCAAGTGGGGGTCTaGCAGGTTCGTTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LYHGWHNLHAGILAQLVFGQVGV*QVRSFL
Trigger: AAGGAAAGAACGAACCTGTCAGACCCCCACTTGACC...GAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp CCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTAGACTTCTAATTAGATaGGGTCAGATGTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: PIVQTAAQRKRVCTAGPSRLLIR*GQMSMV
Trigger: CACCATGGACATCTGACCTCATCTAATTAGAAGTCT...AGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp ATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCATGACCAGTGGTGCCTaGCTGTTTTGTGTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: MAQSPCRYLSTTGLQHWGMTSGA*LFCVKV
Trigger: GACTTTCACACAAAACAGTCAGGCACCACTGGTCAT...GCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp ACAGAAGTGGAGGTGAGGCTTGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCATGGTCTTGATCTCCTaGCCTCATGATCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: TEVEVRLVSASRTLSANFMVLIS*PHDPPA
Trigger: GGCAGGAGGATCATGAGGTCAGGAGATCAAGACCAT...GAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACCTCCACTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp ACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCATAAGCCCCCAGAGAAGCAGATACCTGTaGCCTCTGCTTAACCACTTC +
Preference number: 4 (lower is better)
Translates to: TLSANFQQQAVRSVISPQRSRYL*PLLNHF
Trigger: GAAGTGGTTAAGCAGAGGGCACAGGTATCTGCTTCT...CTGGGGGCTTATGACCGAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
CDS-3UTR GCA 90 bp CTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAAGAAGCAGATACCTGTaGCCTCTGCTTAACCACTTC +
Preference number: 4 (lower is better)
Translates to: LAYRPMTSYQPAYTTDGTRSRYL*PLLNHF
Trigger: GAAGTGGTTAAGCAGAGGGCACAGGTATCTGCTTCT...TGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp ATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGAGCGGCAAATCCACCTaGAAAAGCTCCACAGACTGC +
Preference number: 4 (lower is better)
Translates to: IPRMAQSPCRYLSTTGLQSGKST*KSSTDC
Trigger: GCAGTCTGTGGAGCTTTTGCAGGTGGATTTGCCGCT...CTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCGCTGGAGCCAGCCTTTaGCAGCGTAATTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: YHGWHNLHAGILAQLVFSAGASL*QRNSCL
Trigger: AAGACAAGAATTACGCTGGCAAAGGCTGGCTCCAGC...GCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp AGCTCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGCTGGAGCCAGCCTTTaGCAGCGTAATTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SSLAYRPMTSYQPAYTTDAGASL*QRNSCL
Trigger: AAGACAAGAATTACGCTGGCAAAGGCTGGCTCCAGC...ATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp AGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGCTGGAGCCAGCCTTTaGCAGCGTAATTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SQPIPRMAQSPCRYLSTTAGASL*QRNSCL
Trigger: AAGACAAGAATTACGCTGGCAAAGGCTGGCTCCAGC...AGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GAGCTGCTTAAACGGTCAAGTGGGGGTCTGACAGGTTCGTTCTTTCCTTGTAGGGGTGAGGCTTGTCTCTaGTTCAAGGACTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ELLKRSSGGLTGSFFPCRGEACL*FKDSFC
Trigger: GCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC...CCTACAAGGAAAGAACGAACCTGTCAGACCCCCACTTGACCGTTTAAGCAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp AGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCGGTGAGGCTTGTCTCTaGTTCAAGGACTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLYHGWHNLHAGILAQLVGEACL*FKDSFC
Trigger: GCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC...GACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCTATAGTTCAGACAGCTaGTCAGCGGAAGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: SEYRHRPRFLLLALWHTGYSSDS*SAEEGL
Trigger: CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA...GCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACATATAGTTCAGACAGCTaGTCAGCGGAAGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LAYRPMTSYQPAYTTDGTYSSDS*SAEEGL
Trigger: CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA...TGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATGCTCAGCATATAGTTCAGACAGCTaGTCAGCGGAAGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: PETTMAMVGKDIRFTCSAYSSDS*SAEEGL
Trigger: CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA...TGCTGAGCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CTGGAGCTTGTTAGTCAAGGTCTAAAATCCCTAAGTGTGGTGACCTTTCCATTTATGGCTCACCCACCGTaGCCTCCTGCACGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LELVSQGLKSLSVVTFPFMAHPP*PPARSQ
Trigger: CTGGCTTCGTGCAGGAGGGCACGGTGGGTGAGCCAT...AAATGGAAAGGTCACCACACTTAGGGATTTTAGACCTTGACTAACAAGCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp TTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACCACATACTGTTTGTTTaGTCCAGGGCAGACAACACT +
Preference number: 4 (lower is better)
Translates to: FSTGAYSSDSCSAEEGLHHILFV*SRADNT
Trigger: AGTGTTGTCTGCCCTGGAGCAAACAAACAGTATGTG...GTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp AGACTGATGGCTGCCATTCGAGGGAAGACACCTGCAAATAATCCTGCCAGCCCCCACATACTGTTTGTTTaGTCCAGGGCAGACAACACT +
Preference number: 4 (lower is better)
Translates to: RLMAAIRGKTPANNPASPHILFV*SRADNT
Trigger: AGTGTTGTCTGCCCTGGAGCAAACAAACAGTATGTG...GGGGCTGGCAGGATTATTTGCAGGTGTCTTCCCTCGAATGGCAGCCATCAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483224.5
ENST00000632740.1
CDS-3UTR GCA 90 bp TCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCCACAGAGCTACAGCCTaGATCTTCATTAACTTCAGG +
Preference number: 4 (lower is better)
Translates to: SSALGPIVQTAAQRKRVCHRATA*IFINFR
Trigger: CCTGAAGTTAATGAAGATGCAGGCTGTAGCTCTGTG...GCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTCAAGCTCTGGTTCCTaGTTGGTGTCTGTGTCAGTT +
Preference number: 4 (lower is better)
Translates to: AGILAQLVFSTGAYSSDSSSSGS*LVSVSV
Trigger: AACTGACACAGACACCAAGCAGGAACCAGAGCTTGA...GCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp TTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGTCAAGCTCTGGTTCCTaGTTGGTGTCTGTGTCAGTT +
Preference number: 4 (lower is better)
Translates to: LAQLVFSTGAYSSDSCSASSSGS*LVSVSV
Trigger: AACTGACACAGACACCAAGCAGGAACCAGAGCTTGA...CGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp TTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTTGTGTAGACAGTCATaGTCAGCCACAGGTGACAAA +
Preference number: 4 (lower is better)
Translates to: FSTGAYSSDSCSAEEGLHLCRQS*SATGDK
Trigger: TTTGTCACCTGTGGCTGAGCATGACTGTCTACACAA...GTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCCCCTTAAGTCCCTaGTTGTTTAGTTTAGTGGTT +
Preference number: 4 (lower is better)
Translates to: GRGFALQAPLLTEVEVRLVPLSP*LFSLVV
Trigger: AACCACTAAACTAAACAAGCAGGGACTTAAGGGGAC...AAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp TCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCTTCAACTCATGGCCTTaGTTTCTCAGATCCCGCTAC +
Preference number: 4 (lower is better)
Translates to: SEYRHRPRFLLLALWHTGFNSWP*FLRSRY
Trigger: GTAGCGGGATCTGAGAAAGCAAGGCCATGAGTTGAA...GCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR GCA 90 bp AGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGAACCGCCTTCTCTCTaGTTTCAACTCATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SQPIPRMAQSPCRYLSTTEPPSL*FQLMAL
Trigger: CAAGGCCATGAGTTGAAAGCAGAGAGAAGGCGGTTC...AGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGCTTAACCACTTCAGATaGAACTCGAATCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PMTSYQPAYTTDGTISMPLNHFR*NSNQAG
Trigger: GCCTGCCTGATTCGAGTTCCATCTGAAGTGGTTAAG...CGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp GCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCCTTAACCACTTCAGATaGAACTCGAATCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AGILAQLVFSTGAYSSDSLNHFR*NSNQAG
Trigger: GCCTGCCTGATTCGAGTTCCATCTGAAGTGGTTAAG...GCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp TTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGCTTAACCACTTCAGATaGAACTCGAATCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LAQLVFSTGAYSSDSCSALNHFR*NSNQAG
Trigger: GCCTGCCTGATTCGAGTTCCATCTGAAGTGGTTAAG...CGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTGCTTCAAGGCCTCGATACAACCCTTaGATACCCTCTTCATATAAG +
Preference number: 4 (lower is better)
Translates to: LQAPLLTEVEVRLVSASRPRYNP*IPSSYK
Trigger: CTTATATGAAGAGGGTATCCAAGGGTTGTATCGAGG...CCTTGAAGCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
CDS-3UTR CCA 90 bp TTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACACCTCGATACAACCCTTaGATACCCTCTTCATATAAG +
Preference number: 4 (lower is better)
Translates to: FRQLLSGRGFALQAPLLTPRYNP*IPSSYK
Trigger: CTTATATGAAGAGGGTATCCAAGGGTTGTATCGAGG...TGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CTACACCTGGAGCTTGTTAGTCAAGGTCTAAAATCCCTAAGTGTGGTGACCTTTTCCCATCAGCAGTGCTaGAGCCAGCCTTTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: LHLELVSQGLKSLSVVTFSHQQC*SQPLPA
Trigger: CGCTGGCAAAGGCTGGCTCCAGCACTGCTGATGGGA...AAAGGTCACCACACTTAGGGATTTTAGACCTTGACTAACAAGCTCCAGGTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp AATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTAGCCTATACCACGGATaGCACAATCTCCATGCCGGT +
Preference number: 4 (lower is better)
Translates to: NLHAGILAQLVFSTGAYSSLYHG*HNLHAG
Trigger: ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT...ACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACGCCTTACTAAATCCTTaGGGACTCTGCAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: HAGILAQLVFSTGAYSSDALLNP*GLCSLV
Trigger: AACCAGGCTGCAGAGTCCCCAAGGATTTAGTAAGGC...GTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354883.11
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CCA 90 bp TGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTGAATCCACCATCAGGTaGCAGGAAATGAAAGATCAG +
Preference number: 4 (lower is better)
Translates to: WSSALGPIVQTAAQRKRVESTIR*QEMKDQ
Trigger: CTGATCTTTCATTTCCTGCCACCTGATGGTGGATTC...AACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp TTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCATAAGCTGCCTTTTCAAAGCTaGCCCAGGCCCTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: FKDSFCQLPTASCAFGHKLPFQS*PRPSFQ
Trigger: CTGAAAGGAGGGCCTGGGCCAGCTTTGAAAAGGCAG...CTTATGACCGAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483224.5
ENST00000632740.1
CDS-3UTR CCA 90 bp CCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTTGTAACTCCCATGTaGAGTATCAGTCGCTCACAG +
Preference number: 4 (lower is better)
Translates to: PMTSYQPAYTTDGTISMPVVTPM*SISRSQ
Trigger: CTGTGAGCGACTGATACTCCACATGGGAGTTACAAC...CGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp GCTTGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGGCTCTGGTTCCTGCTTaGTGTCTGTGTCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: ACLCFKDSFCQLPTASCAALVPA*CLCQFL
Trigger: CAGAAACTGACACAGACACCAAGCAGGAACCAGAGC...CGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp AGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGATCGTGCCCTGCTCTGGTTCCTGCTTaGTGTCTGTGTCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SCNSHVEYQSLTGLGSCPALVPA*CLCQFL
Trigger: CAGAAACTGACACAGACACCAAGCAGGAACCAGAGC...AGGGCACGATCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTTGCTTGTTTGCCCCATaGGTATTGTCCCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: QPIPRMAQSPCRYLSTTGCLFAP*VLSPQT
Trigger: TGTCTGAGGGGACAATACCCATGGGGCAAACAAGCA...ACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp GTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTGCTGGTTAGCTAATGGTTaGACAGAGAAGTCACCACAA +
Preference number: 4 (lower is better)
Translates to: VCTAGPSLDRSGGEACLCWLANG*TEKSPQ
Trigger: TTGTGGTGACTTCTCTGTCCAACCATTAGCTAACCA...GCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CAA 72 bp TTCCTTGTAGGGGATTCTTCCTGGACTTTAGCAAGGTaGTATCACCCGGACTCCACAGAGCTACAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: FLVGDSSWTLAR*YHPDSTELQPA
Trigger: TGCAGGCTGTAGCTCTGTGGAGTCCGGGTGATACAACCTTGCTAAAGTCCAGGAAGAATCCCCTACAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CAA 72 bp CACCACAACCACTGTCTCCTATCCTTTACCGACGGCTaGTGTGTTTGTGTTGGGGTGTGCCATCACTTCCTA +
Preference number: 4 (lower is better)
Translates to: HHNHCLLSFTDG*CVCVGVCHHFL
Trigger: TAGGAAGTGATGGCACACCCCAACACAAACACACAAGCCGTCGGTAAAGGATAGGAGACAGTGGTTGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp GATGTTGCTATTTGCTTGAATCAACAATCCATGGATTGTTGTAAGCCTTTGGTTTCCTGCCAGCCCCTGTaGCCGCCAGACCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: DVAICLNQQSMDCCKPLVSCQPL*PPDPMQ
Trigger: CTGCATGGGGTCTGGCGGTCACAGGGGCTGGCAGGA...AACCAAAGGCTTACAACAATCCATGGATTGTTGATTCAAGCAAATAGCAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp TCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCTCAGGTGGCAGGAAATaGAAGATCAGATACAGATCA +
Preference number: 4 (lower is better)
Translates to: SSALGPIVQTAAQRKRVCSGGRK*KIRYRS
Trigger: TGATCTGTATCTGATCTTTCATTTCCTGCCACCTGA...GCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp CAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGTGCGTTTTTATGGGTaGAATCTGAGGGTAATTAAA +
Preference number: 4 (lower is better)
Translates to: QLLSGRGFALQAPLLTEVVRFYG*NLRVIK
Trigger: TTTAATTACCCTCAGATTTCACCCATAAAAACGCAC...CACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp TTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGAGAAGCAGATACCTGTaGCCTCTGCTTAACCACTTC +
Preference number: 4 (lower is better)
Translates to: FRVPPQTPFSSLSSLAYRRSRYL*PLLNHF
Trigger: GAAGTGGTTAAGCAGAGGGCACAGGTATCTGCTTCT...CCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCATAAGCCCCCAGAAAGATGAAAGAAGCAGATACCTGTaGCCTCTGCTTAACCACTTC +
Preference number: 4 (lower is better)
Translates to: ANFQQQAVRSVISPQKDERSRYL*PLLNHF
Trigger: GAAGTGGTTAAGCAGAGGGCACAGGTATCTGCTTCT...TTCATCTTTCTGGGGGCTTATGACCGAACGCACAGCTTGCTGTTGGAAGTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
CDS-3UTR GCA 90 bp AGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCAGAAGCAGATACCTGTaGCCTCTGCTTAACCACTTC +
Preference number: 4 (lower is better)
Translates to: SLYHGWHNLHAGILAQLVRSRYL*PLLNHF
Trigger: GAAGTGGTTAAGCAGAGGGCACAGGTATCTGCTTCT...GACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GGTGAGGCTTGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCAGAAGCAGATACCTGTaGCCTCTGCTTAACCACTTC +
Preference number: 4 (lower is better)
Translates to: GEACLCFKDSFCQLPTASRSRYL*PLLNHF
Trigger: GAAGTGGTTAAGCAGAGGGCACAGGTATCTGCTTCT...GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
CDS-3UTR GCA 90 bp CTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTAGCGGCAAATCCACCTaGAAAAGCTCCACAGACTGC +
Preference number: 4 (lower is better)
Translates to: LRKLFRVPPQTPFSSLSSSGKST*KSSTDC
Trigger: GCAGTCTGTGGAGCTTTTGCAGGTGGATTTGCCGCT...AGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GAGAAACACCCACATACACAACTCTTCCCCAAGTCTCCTTTTCCCAAACAAACAGACCGCCAGACCCCATaGAGGACAGAGAGCACATTC +
Preference number: 4 (lower is better)
Translates to: EKHPHTQLFPKSPFPKQTDRQTP*RTESTF
Trigger: GAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTC...TGTTTGTTTGGGAAAAGGAGACTTGGGGAAGAGTTGTGTATGTGGGTGTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp CTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACATTCAAGGACTCTTTCTaGCAACTTCCAACAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LAYRPMTSYQPAYTTDGTFKDSF*QLPTAS
Trigger: GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA...TGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTTCAAGGACTCTTTCTaGCAACTTCCAACAGCAAGC +
Preference number: 4 (lower is better)
Translates to: AGILAQLVFSTGAYSSDSFKDSF*QLPTAS
Trigger: GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA...GCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGTTCAAGGACTCTTTCTaGCAACTTCCAACAGCAAGC +
Preference number: 4 (lower is better)
Translates to: PMTSYQPAYTTDGTISMPFKDSF*QLPTAS
Trigger: GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA...CGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCATATAGTTCAGACAGCTaGTCAGCGGAAGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LHAGILAQLVFSTGAYSSYSSDS*SAEEGL
Trigger: CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA...TGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGTATAGTTCAGACAGCTaGTCAGCGGAAGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: FRVPPQTPFSSLSSLAYRYSSDS*SAEEGL
Trigger: CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA...CCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCAATCCTTGGGGACTCTaGAGCCTGGTTTTAATGGTA +
Preference number: 4 (lower is better)
Translates to: SEYRHRPRFLLLALWHTGNPWGL*SLVLMV
Trigger: TACCATTAAAACCAGGCTGCAGAGTCCCCAAGGATT...GCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354883.11
ENST00000633701.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGCCCAGAAAGAGTGCTTaGTATGCACCTGTAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LAQLVFSTGAYSSDSCSAPRKSA*YAPVVQ
Trigger: TTGAACTACAGGTGCATAGCAAGCACTCTTTCTGGG...CGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp AGCTCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATCACTTGAGTTGCAGCTaGTTTCTCTCACACACCACA +
Preference number: 4 (lower is better)
Translates to: SSLAYRPMTSYQPAYTTDHLSCS*FLSHTT
Trigger: TGTGGTGTGTGAGAGAAAGCAGCTGCAACTCAAGTG...ATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
CDS-3UTR GCA 90 bp AATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTCCTAGTCACTTGAGTTaGAGCTGCTTTCTCTCACAC +
Preference number: 4 (lower is better)
Translates to: NDFIPASLYHGWHNLHAGPSHLS*SCFLSH
Trigger: GTGTGAGAGAAAGCAGCTGCAACTCAAGTGACTAGG...ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
CDS-3UTR GCA 90 bp GCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCCCTAGTCACTTGAGTTaGAGCTGCTTTCTCTCACAC +
Preference number: 4 (lower is better)
Translates to: AYRPMTSYQPAYTTDGTIPSHLS*SCFLSH
Trigger: GTGTGAGAGAAAGCAGCTGCAACTCAAGTGACTAGG...GATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
CDS-3UTR GCA 90 bp AGCTCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATCCTAGTCACTTGAGTTaGAGCTGCTTTCTCTCACAC +
Preference number: 4 (lower is better)
Translates to: SSLAYRPMTSYQPAYTTDPSHLS*SCFLSH
Trigger: GTGTGAGAGAAAGCAGCTGCAACTCAAGTGACTAGG...ATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
CDS-3UTR GCA 90 bp AGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTCCTAGTCACTTGAGTTaGAGCTGCTTTCTCTCACAC +
Preference number: 4 (lower is better)
Translates to: SQPIPRMAQSPCRYLSTTPSHLS*SCFLSH
Trigger: GTGTGAGAGAAAGCAGCTGCAACTCAAGTGACTAGG...AGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
CDS-3UTR GCA 90 bp CATGGCCTTGCACCTGCATGTGGCTGTCTAGATCCCCAGGAATGTATTGGACCTCACAGAGCTACAGCCTaGATCTTCATTAACTTCAGG +
Preference number: 4 (lower is better)
Translates to: HGLAPACGCLDPQECIGPHRATA*IFINFR
Trigger: CCTGAAGTTAATGAAGATGCAGGCTGTAGCTCTGTG...AGGTCCAATACATTCCTGGGGATCTAGACAGCCACATGCAGGTGCAAGGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCTTTATTGTTACAGCTTaGCTAGTGACTTTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LGPIVQTAAQRKRVCTAGFIVTA*LVTFPG
Trigger: TCCAGGAAAAGTCACTAGGCAAGCTGTAACAATAAA...GCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp TGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTCCCCCAGGATTTGCTaGTGTTGCTGTTTATTGTTA +
Preference number: 4 (lower is better)
Translates to: WSSALGPIVQTAAQRKRVSPRIC*CCCLLL
Trigger: TAACAATAAACAGCAACAGCAGCAAATCCTGGGGGA...AACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GAGCTGCTTAAACGGTCAAGTGGGGGTCTGACAGGTTCGTTCTTTCCTTGTAGGTCCTCCCCCAGGATTTaGTGCTGTTGCTGTTTATTG +
Preference number: 4 (lower is better)
Translates to: ELLKRSSGGLTGSFFPCRSSPRI*CCCCLL
Trigger: CAATAAACAGCAACAGCAGCAAATCCTGGGGGAGGA...CCTACAAGGAAAGAACGAACCTGTCAGACCCCCACTTGACCGTTTAAGCAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGCAATATAATTCTAACTaGCATCATCTCAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: QRKRVCTAGPSLDRSGGEQYNSN*HHLSPS
Trigger: TGAAGGGCTGAGATGATGGCAGTTAGAATTATATTG...CTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CCA 90 bp AGCTCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATCTTAACCACTTCAGATaGAACTCGAATCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SSLAYRPMTSYQPAYTTDLNHFR*NSNQAG
Trigger: GCCTGCCTGATTCGAGTTCCATCTGAAGTGGTTAAG...ATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp TTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACCCTCGATACAACCCTTaGATACCCTCTTCATATAAG +
Preference number: 4 (lower is better)
Translates to: FSTGAYSSDSCSAEEGLHPRYNP*IPSSYK
Trigger: CTTATATGAAGAGGGTATCCAAGGGTTGTATCGAGG...GTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGCCTCGATACAACCCTTaGATACCCTCTTCATATAAG +
Preference number: 4 (lower is better)
Translates to: HNWSSALGPIVQTAAQRKPRYNP*IPSSYK
Trigger: CTTATATGAAGAGGGTATCCAAGGGTTGTATCGAGG...CTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp GTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTGCTGTCAGTATAGTTGGTaGTCCTTCTTTTACAAACGC +
Preference number: 4 (lower is better)
Translates to: VCTAGPSLDRSGGEACLCCQYSW*SFFYKR
Trigger: GCGTTTGTAAAAGAAGGACCACCAACTATACTGACA...GCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp AATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTTTGCAAGAAAATCCCTaGTATATGGTCCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: NDFIPASLYHGWHNLHAGLQENP*YMVPCQ
Trigger: CTGGCAGGGGACCATATACCAGGGATTTTCTTGCAA...ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR CCA 90 bp ATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCACCACAGGGGGCGCTaGACACATCTCAAACTTATT +
Preference number: 4 (lower is better)
Translates to: IQANDFIPASLYHGWHNLHHRGR*THLKLI
Trigger: AATAAGTTTGAGATGTGTCCAGCGCCCCCTGTGGTG...GAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp GAGGCTGCGAGGAAGCTTGGGTTCAAGCGTCACTCATCTGTACATAGTTGTAACCTTGCTTGTTTCCAATaGCCACCTCCCCAAAGCATG +
Preference number: 4 (lower is better)
Translates to: EAARKLGFKRHSSVHSCNLACFQ*PPPQSM
Trigger: CATGCTTTGGGGAGGTGGCCATTGGAAACAAGCAAG...GTTACAACTATGTACAGATGAGTGACGCTTGAACCCAAGCTTCCTCGCAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp AGACTGATGGCTGCCATTCGAGGGAAGACACCTGCAAATAATCCTGCCAGCCCCGTAGGGGATTCTTCCTaGACTTTAGCAAGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: RLMAAIRGKTPANNPASPVGDSS*TLARLY
Trigger: ATACAACCTTGCTAAAGTCCAGGAAGAATCCCCTAC...GGGGCTGGCAGGATTATTTGCAGGTGTCTTCCCTCGAATGGCAGCCATCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCCACCATGGCTATGGTaGGCAAGGACATCCGGTTTA +
Preference number: 4 (lower is better)
Translates to: LRKLFRVPPQTPFSSLSSPPWLW*ARTSGL
Trigger: TAAACCGGATGTCCTTGCCCACCATAGCCATGGTGG...AGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp ATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGGAGGTCAGATGTCCATaGTGCAACTCTTACGGCATC +
Preference number: 4 (lower is better)
Translates to: IPRMAQSPCRYLSTTGLQEVRCP*CNSYGI
Trigger: GATGCCGTAAGAGTTGCACCATGGACATCTGACCTC...CTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp GAGGCTGCGAGGAAGCTTGGGTTCAAGCGTCACTCATCTGTACATAGTTGTAACGAGGTCAGATGTCCATaGTGCAACTCTTACGGCATC +
Preference number: 4 (lower is better)
Translates to: EAARKLGFKRHSSVHSCNEVRCP*CNSYGI
Trigger: GATGCCGTAAGAGTTGCACCATGGACATCTGACCTC...GTTACAACTATGTACAGATGAGTGACGCTTGAACCCAAGCTTCCTCGCAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp AATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTTGCAGTCATGACCAGTaGTGCCTGACTGTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: NDFIPASLYHGWHNLHAGCSHDQ*CLTVLC
Trigger: ACACAAAACAGTCAGGCACCACTGGTCATGACTGCA...ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp AATCCTGCCAGCCCCTGTGACCGCCAGACCCCATGCAGGACAGAGAGCACATTCATAATGTGGCAACTCTaGAAATTGGATATTCCCTTT +
Preference number: 4 (lower is better)
Translates to: NPASPCDRQTPCRTESTFIMWQL*KLDIPF
Trigger: AAAGGGAATATCCAATTTCCAGAGTTGCCACATTAT...GAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTCACAGGGGCTGGCAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp TTGCCTTCTGCTGAATCCACCATCAGGTGGCAGGAAATGAAAGATCAGATACAGTGGCATACAGGCCAATaGCTTCATACCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LPSAESTIRWQEMKDQIQWHTGQ*LHTSQP
Trigger: AGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCA...CTGTATCTGATCTTTCATTTCCTGCCACCTGATGGTGGATTCAGCAGAAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp TCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCCCAGCATATATTCCATaGAAACCACCAGCCTTACTA +
Preference number: 4 (lower is better)
Translates to: SLAYRPMTSYQPAYTTDGPAYIP*KPPALL
Trigger: TAGTAAGGCTGGTGGTTTTCATGGAATATATGCTGG...GCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354883.11
ENST00000633701.1
ENST00000676754.1
CDS-3UTR TCA 90 bp TCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACTCAGGTGGCAGGAAATaGAAGATCAGATACAGATCA +
Preference number: 4 (lower is better)
Translates to: SGIQANDFIPASLYHGWHSGGRK*KIRYRS
Trigger: TGATCTGTATCTGATCTTTCATTTCCTGCCACCTGA...GTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp GTTCTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCCCTTTCAGTCTGACATaGGAATGGCGAGAATGGCTC +
Preference number: 4 (lower is better)
Translates to: VLRKLFRVPPQTPFSSLSPFSLT*EWREWL
Trigger: GAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGG...GCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp CTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCACTACAATCACATAAGTaGTCCAACTCGGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: LLQGLFLPTSNSKLCVRSLQSHK*SNSASG
Trigger: TCCTGATGCCGAGTTGGATCACTTATGTGATTGTAG...TGACCGAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR TCA 90 bp TTTCTCTCACACACCACAGGGGGCGCTGGACACATCTCAAACTTATTTATTAAGCCCCAGATGACTTCCTaGAGCCACAGATCATCACCC +
Preference number: 4 (lower is better)
Translates to: FLSHTTGGAGHISNLFIKPQMTS*SHRSSP
Trigger: GGGTGATGATCTGTGGCTTCAGGAAGTCATCTGGGG...CTTAATAAATAAGTTTGAGATGTGTCCAGCGCCCCCTGTGGTGTGTGAGAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GAGGCTGCGAGGAAGCTTGGGTTCAAGCGTCACTCATCTGTACATAGTTGTAACAGAAGCAGATACCTGTaGCCTCTGCTTAACCACTTC +
Preference number: 4 (lower is better)
Translates to: EAARKLGFKRHSSVHSCNRSRYL*PLLNHF
Trigger: GAAGTGGTTAAGCAGAGGGCACAGGTATCTGCTTCT...GTTACAACTATGTACAGATGAGTGACGCTTGAACCCAAGCTTCCTCGCAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GTTCTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCGCTGGAGCCAGCCTTTaGCAGCGTAATTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: VLRKLFRVPPQTPFSSLSAGASL*QRNSCL
Trigger: AAGACAAGAATTACGCTGGCAAAGGCTGGCTCCAGC...GCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CTACACCTGGAGCTTGTTAGTCAAGGTCTAAAATCCCTAAGTGTGGTGACCTTTCATTCCCATCAGCAGTaGTGGAGCCAGCCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LHLELVSQGLKSLSVVTFHSHQQ*WSQPLP
Trigger: TGGCAAAGGCTGGCTCCAGCACTGCTGATGGGAATG...AAAGGTCACCACACTTAGGGATTTTAGACCTTGACTAACAAGCTCCAGGTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp CAAAATCACATACTGTTTGTTTGCTCCAGGGCAGACAACACTGCTAGATTCCTGTCCCAGACTGATGGCTaGCATTCGAGGGAAGACACC +
Preference number: 4 (lower is better)
Translates to: QNHILFVCSRADNTARFLSQTDG*HSREDT
Trigger: GGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGA...CAGGAATCTAGCAGTGTTGTCTGCCCTGGAGCAAACAAACAGTATGTGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp AGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTTTCAAGGACTCTTTCTaGCAACTTCCAACAGCAAGC +
Preference number: 4 (lower is better)
Translates to: SQPIPRMAQSPCRYLSTTFKDSF*QLPTAS
Trigger: GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA...AGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CTCACACACCACAGGGGGCGCTGGACACATCTCTGTAAAATAATACAATTGTGCGGTGAGGCTTGTCTCTaGTTCAAGGACTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LTHHRGRWTHLCKIIQLCGEACL*FKDSFC
Trigger: GCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC...GCACAATTGTATTATTTTACAGAGATGTGTCCAGCGCCCCCTGTGGTGTGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp ATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCTATAGTTCAGACAGCTaGTCAGCGGAAGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: IQANDFIPASLYHGWHNLYSSDS*SAEEGL
Trigger: CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA...GAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp AGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCCAGAAAGAGTGCTTaGTATGCACCTGTAGTTCAA +
Preference number: 4 (lower is better)
Translates to: RPMTSYQPAYTTDGTISMPRKSA*YAPVVQ
Trigger: TTGAACTACAGGTGCATAGCAAGCACTCTTTCTGGG...CATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp CTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCACCCAGAAAGAGTGCTTaGTATGCACCTGTAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LHAGILAQLVFSTGAYSSPRKSA*YAPVVQ
Trigger: TTGAACTACAGGTGCATAGCAAGCACTCTTTCTGGG...TGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp GCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCGTTACCCAGAAAGAGTaGTTGCTATGCACCTGTAGT +
Preference number: 4 (lower is better)
Translates to: AYRPMTSYQPAYTTDGTIVTQKE*LLCTCS
Trigger: ACTACAGGTGCATAGCAAGCACTCTTTCTGGGTAAC...GATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp CAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTGTTACCCAGAAAGAGTaGTTGCTATGCACCTGTAGT +
Preference number: 4 (lower is better)
Translates to: QPIPRMAQSPCRYLSTTGVTQKE*LLCTCS
Trigger: ACTACAGGTGCATAGCAAGCACTCTTTCTGGGTAAC...ACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp CCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCCTAGTCACTTGAGTTaGAGCTGCTTTCTCTCACAC +
Preference number: 4 (lower is better)
Translates to: PIPRMAQSPCRYLSTTGLPSHLS*SCFLSH
Trigger: GTGTGAGAGAAAGCAGCTGCAACTCAAGTGACTAGG...AAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
CDS-3UTR GCA 90 bp CTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTGTCGTATGCAGTGACTaGAACACCGAAGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: LRKLFRVPPQTPFSSLSSVVCSD*NTEVDC
Trigger: ACAGTCCACTTCGGTGTTGCAGTCACTGCATACGAC...AGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp AATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTAGTCATGACCAGTGGTaGCTGACTGTTTTGTGTGAA +
Preference number: 4 (lower is better)
Translates to: NDFIPASLYHGWHNLHAGSHDQW*LTVLCE
Trigger: TTCACACAAAACAGTCAGGCACCACTGGTCATGACT...ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACGTTTGTGTTGGGGTGTaGCATCACTTCCTATTTGTG +
Preference number: 4 (lower is better)
Translates to: HAGILAQLVFSTGAYSSDVCVGV*HHFLFV
Trigger: CACAAATAGGAAGTGATGGCACACCCCAACACAAAC...GTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp TCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCGGCGTGATTCTGAACTaGAATGTGAAGATGCATTTT +
Preference number: 4 (lower is better)
Translates to: SSALGPIVQTAAQRKRVCGVILN*NVKMHF
Trigger: AAAATGCATCTTCACATTGCAGTTCAGAATCACGCC...GCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CCA 90 bp GAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCCAACCTCGATACAACCCTTaGATACCCTCTTCATATAAG +
Preference number: 4 (lower is better)
Translates to: EYRHRPRFLLLALWHTGQPRYNP*IPSSYK
Trigger: CTTATATGAAGAGGGTATCCAAGGGTTGTATCGAGG...TTGGCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp TCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACCCTCGATACAACCCTTaGATACCCTCTTCATATAAG +
Preference number: 4 (lower is better)
Translates to: SGIQANDFIPASLYHGWHPRYNP*IPSSYK
Trigger: CTTATATGAAGAGGGTATCCAAGGGTTGTATCGAGG...GTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp TCCTGGACTTTAGCAAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTGCACCTCGATACAACCCTTaGATACCCTCTTCATATAAG +
Preference number: 4 (lower is better)
Translates to: SWTLARLYHPDSTELQPAPRYNP*IPSSYK
Trigger: CTTATATGAAGAGGGTATCCAAGGGTTGTATCGAGG...TGCAGGCTGTAGCTCTGTGGAGTCCGGGTGATACAACCTTGCTAAAGTCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp GAATTAACTAGGGGGAGAAACACCCACATACACAACTCTTCCCCAAGTCTCCTTAGCCTATACCACGGATaGCACAATCTCCATGCCGGT +
Preference number: 4 (lower is better)
Translates to: ELTRGRNTHIHNSSPSLLSLYHG*HNLHAG
Trigger: ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT...AAGGAGACTTGGGGAAGAGTTGTGTATGTGGGTGTTTCTCCCCCTAGTTAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp AGGTTCATTTATAAATGTCAGTATAGTTGGTGGTCCTTCTTTTACAAACGCAGTCACGTCCTCGCGCGCTaGGCGCCGCCATGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: RFIYKCQYSWWSFFYKRSHVLAR*APPCLR
Trigger: CCTCAAACATGGCGGCGCCCAGCGCGCGAGGACGTG...ACTGCGTTTGTAAAAGAAGGACCACCAACTATACTGACATTTATAAATGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354883.11
ENST00000633701.1
CDS-3UTR CCA 90 bp TTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCATAAGCTTGCTTGTTTCCAATaGCCACCTCCCCAAAGCATG +
Preference number: 4 (lower is better)
Translates to: FKDSFCQLPTASCAFGHKLACFQ*PPPQSM
Trigger: CATGCTTTGGGGAGGTGGCCATTGGAAACAAGCAAG...CTTATGACCGAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCCTGTCTTCTAACAGGTaGGTTGGGAGCTGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: LYHGWHNLHAGILAQLVFLSSNR*VGSCLN
Trigger: GTTTAAGCAGCTCCCAACCCACCTGTTAGAAGACAG...GAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp ATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGAGCATGAACAGCAGCTaGTTCCTCTGTGTACCAAGA +
Preference number: 4 (lower is better)
Translates to: IPRMAQSPCRYLSTTGLQSMNSS*FLCVPR
Trigger: TCTTGGTACACAGAGGAACCAGCTGCTGTTCATGCT...CTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp GAGGCTGCGAGGAAGCTTGGGTTCAAGCGTCACTCATCTGTACATAGTTGTAACAGCATGAACAGCAGCTaGTTCCTCTGTGTACCAAGA +
Preference number: 4 (lower is better)
Translates to: EAARKLGFKRHSSVHSCNSMNSS*FLCVPR
Trigger: TCTTGGTACACAGAGGAACCAGCTGCTGTTCATGCT...GTTACAACTATGTACAGATGAGTGACGCTTGAACCCAAGCTTCCTCGCAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACTGCGCTGTTGAACAGTaGCTACTGATTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: HAGILAQLVFSTGAYSSDCAVEQ*LLIVVV
Trigger: GACTACAACAATCAGTAGCCACTGTTCAACAGCGCA...GTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp GTTCTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTGCTTGTTTGCCCCATaGGTATTGTCCCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: VLRKLFRVPPQTPFSSLSCLFAP*VLSPQT
Trigger: TGTCTGAGGGGACAATACCCATGGGGCAAACAAGCA...GCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp GACTTTAGCAAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTGCATCTTCGGCAACTCTGGAAATTaGATATTCCCTTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DFSKVVSPGLHRATACIFGNSGN*IFPFSS
Trigger: GGAGGAGAAAGGGAATATCCAATTTCCAGAGTTGCC...GAAGATGCAGGCTGTAGCTCTGTGGAGTCCGGGTGATACAACCTTGCTAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp AGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTTCTGCTTTCAACTCATaGCCTTGCTTTCTCAGATCC +
Preference number: 4 (lower is better)
Translates to: SQPIPRMAQSPCRYLSTTSAFNS*PCFLRS
Trigger: GGATCTGAGAAAGCAAGGCCATGAGTTGAAAGCAGA...AGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
3UTR CAA 72 bp GTCTCCTATCCTTTACCGACGGCTTGTGTGTTTGTGTaGGGGTGTGCCATCACTTCCTATTTGTGTAGACAG +
Preference number: 4 (lower is better)
Translates to: VSYPLPTACVFV*GCAITSYLCRQ
Trigger: CTGTCTACACAAATAGGAAGTGATGGCACACCCCAACACAAACACACAAGCCGTCGGTAAAGGATAGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CAA 72 bp CCACTGTCTCCTATCCTTTACCGACGGCTTGTGTGTTaGTGTTGGGGTGTGCCATCACTTCCTATTTGTGTA +
Preference number: 4 (lower is better)
Translates to: PLSPILYRRLVC*CWGVPSLPICV
Trigger: TACACAAATAGGAAGTGATGGCACACCCCAACACAAACACACAAGCCGTCGGTAAAGGATAGGAGACAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp GTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGGTGCGTTTTTATGGGTaGAATCTGAGGGTAATTAAA +
Preference number: 4 (lower is better)
Translates to: VFSTGAYSSDSCSAEEGLVRFYG*NLRVIK
Trigger: TTTAATTACCCTCAGATTTCACCCATAAAAACGCAC...CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp GAATTAACTAGGGGGAGAAACACCCACATACACAACTCTTCCCCAAGTCTCCTTCCTTTCAGTCTGACATaGGAATGGCGAGAATGGCTC +
Preference number: 4 (lower is better)
Translates to: ELTRGRNTHIHNSSPSLLPFSLT*EWREWL
Trigger: GAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGG...AAGGAGACTTGGGGAAGAGTTGTGTATGTGGGTGTTTCTCCCCCTAGTTAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp GTTCTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCCAGTTTCTGTTAGCATaGACAGCAGCTGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VLRKLFRVPPQTPFSSLSQFLLA*TAAGSS
Trigger: AGAGGAACCAGCTGCTGTTCATGCTAACAGAAACTG...GCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp CTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCAAGACTTCTAATTAGATaGGGTCAGATGTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: LLQGLFLPTSNSKLCVRSRLLIR*GQMSMV
Trigger: CACCATGGACATCTGACCTCATCTAATTAGAAGTCT...TGACCGAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp CTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTATGACCAGTGGTGCCTaGCTGTTTTGTGTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: LRKLFRVPPQTPFSSLSSMTSGA*LFCVKV
Trigger: GACTTTCACACAAAACAGTCAGGCACCACTGGTCAT...AGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GTTCTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCAGAAGCAGATACCTGTaGCCTCTGCTTAACCACTTC +
Preference number: 4 (lower is better)
Translates to: VLRKLFRVPPQTPFSSLSRSRYL*PLLNHF
Trigger: GAAGTGGTTAAGCAGAGGGCACAGGTATCTGCTTCT...GCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GAGAAACACCCACATACACAACTCTTCCCCAAGTCTCCTTTTCCCAAACAAACAAGCGGCAAATCCACCTaGAAAAGCTCCACAGACTGC +
Preference number: 4 (lower is better)
Translates to: EKHPHTQLFPKSPFPKQTSGKST*KSSTDC
Trigger: GCAGTCTGTGGAGCTTTTGCAGGTGGATTTGCCGCT...TGTTTGTTTGGGAAAAGGAGACTTGGGGAAGAGTTGTGTATGTGGGTGTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp AATCTGAGGGTAATTAAAACCAGCAGCCTAGTTACCCAGAAAGAGTGCTTGCTATCCCAGACTGATGGCTaGCATTCGAGGGAAGACACC +
Preference number: 4 (lower is better)
Translates to: NLRVIKTSSLVTQKECLLSQTDG*HSREDT
Trigger: GGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGA...TAGCAAGCACTCTTTCTGGGTAACTAGGCTGCTGGTTTTAATTACCCTCAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp CCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTTTCAAGGACTCTTTCTaGCAACTTCCAACAGCAAGC +
Preference number: 4 (lower is better)
Translates to: PIPRMAQSPCRYLSTTGLFKDSF*QLPTAS
Trigger: GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA...AAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp CTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCTTCAAGGACTCTTTCTaGCAACTTCCAACAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LYHGWHNLHAGILAQLVFFKDSF*QLPTAS
Trigger: GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA...GAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GTTTGCTCCAGGGCAGACAACACTGCTAGATTCCTGACATTTTGTTTTGAATTTCAGCGGAAGAGGGTTTaGACTGCAGGCCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: VCSRADNTARFLTFCFEFQRKRV*TAGPSL
Trigger: AAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTG...AAATTCAAAACAAAATGTCAGGAATCTAGCAGTGTTGTCTGCCCTGGAGCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp ATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGAATCCTTGGGGACTCTaGAGCCTGGTTTTAATGGTA +
Preference number: 4 (lower is better)
Translates to: IPRMAQSPCRYLSTTGLQNPWGL*SLVLMV
Trigger: TACCATTAAAACCAGGCTGCAGAGTCCCCAAGGATT...CTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354883.11
ENST00000633701.1
ENST00000676754.1
CDS-3UTR GCA 90 bp AATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTCACATACTGTTTGTTTaGTCCAGGGCAGACAACACT +
Preference number: 4 (lower is better)
Translates to: NLHAGILAQLVFSTGAYSHILFV*SRADNT
Trigger: AGTGTTGTCTGCCCTGGAGCAAACAAACAGTATGTG...ACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp GCTGCCATTCGAGGGAAGACACCTGCAAATAATCTACTTCATGTCCTCCAGATCGCAAAGGGAGGCCACTaGTTTGCTCTTGCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: AAIRGKTPANNLLHVLQIAKGGH*FALARK
Trigger: TTTTCTTGCAAGAGCAAAGCAGTGGCCTCCCTTTGC...GATCTGGAGGACATGAAGTAGATTATTTGCAGGTGTCTTCCCTCGAATGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR GCA 90 bp TGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCAGTCATGACCAGTGGTaGCTGACTGTTTTGTGTGAA +
Preference number: 4 (lower is better)
Translates to: CLCFKDSFCQLPTASCAFSHDQW*LTVLCE
Trigger: TTCACACAAAACAGTCAGGCACCACTGGTCATGACT...GAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCACCTCGATACAACCCTTaGATACCCTCTTCATATAAG +
Preference number: 4 (lower is better)
Translates to: LHAGILAQLVFSTGAYSSPRYNP*IPSSYK
Trigger: CTTATATGAAGAGGGTATCCAAGGGTTGTATCGAGG...TGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp TGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCGAATCCACCATCAGGTaGCAGGAAATGAAAGATCAG +
Preference number: 4 (lower is better)
Translates to: CLCFKDSFCQLPTASCAFESTIR*QEMKDQ
Trigger: CTGATCTTTCATTTCCTGCCACCTGATGGTGGATTC...GAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483224.5
ENST00000632740.1
CDS-3UTR CCA 90 bp CCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTAATTGTGCGTTTTTATaGGTGAAATCTGAGGGTAAT +
Preference number: 4 (lower is better)
Translates to: PIVQTAAQRKRVCTAGPSNCAFL*VKSEGN
Trigger: ATTACCCTCAGATTTCACCCATAAAAACGCACAATT...AGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp CTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCAGTAGGGGATTCTTCCTaGACTTTAGCAAGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: LLQGLFLPTSNSKLCVRSVGDSS*TLARLY
Trigger: ATACAACCTTGCTAAAGTCCAGGAAGAATCCCCTAC...TGACCGAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp AAGATGAAACCTCCCAGACTGATGGCTGCCATTCGAGGGAAGACACCTGCAAATGGCAACTCTGGAAATTaGATATTCCCTTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KMKPPRLMAAIRGKTPANGNSGN*IFPFSS
Trigger: GGAGGAGAAAGGGAATATCCAATTTCCAGAGTTGCC...ATTTGCAGGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGGAGGTTTCATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCTCTGCTTTCAACTCATaGCCTTGCTTTCTCAGATCC +
Preference number: 4 (lower is better)
Translates to: LYHGWHNLHAGILAQLVFSAFNS*PCFLRS
Trigger: GGATCTGAGAAAGCAAGGCCATGAGTTGAAAGCAGA...GAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR TCA 90 bp AATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTCCAGCATATATTCCATaGAAACCACCAGCCTTACTA +
Preference number: 4 (lower is better)
Translates to: NLHAGILAQLVFSTGAYSPAYIP*KPPALL
Trigger: TAGTAAGGCTGGTGGTTTTCATGGAATATATGCTGG...ACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354883.11
ENST00000633701.1
ENST00000676754.1
CDS-3UTR TCA 90 bp CTGGAGCTTGTTAGTCAAGGTCTAAAATCCCTAAGTGTGGTGACCTTTCCATTTCATCTTGCCTTCTGCTaGATCCACCATCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LELVSQGLKSLSVVTFPFHLAFC*IHHQVA
Trigger: TGCCACCTGATGGTGGATTCAGCAGAAGGCAAGATG...AAATGGAAAGGTCACCACACTTAGGGATTTTAGACCTTGACTAACAAGCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp TCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCGTGCGTTTTTATGGGTaGAATCTGAGGGTAATTAAA +
Preference number: 4 (lower is better)
Translates to: SEYRHRPRFLLLALWHTGVRFYG*NLRVIK
Trigger: TTTAATTACCCTCAGATTTCACCCATAAAAACGCAC...GCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp ATACTGTTTGTTTGCTCCAGGGCAGACAACACTGCTAGATTCCTGACATTTTGTGCCCACCTAGTCACTTaGGTTGCAGCTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: ILFVCSRADNTARFLTFCAHLVT*VAAAFS
Trigger: AGAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGC...ACAAAATGTCAGGAATCTAGCAGTGTTGTCTGCCCTGGAGCAAACAAACAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp GAAACACCCACATACACAACTCTTCCCCAAGTCTCCTTTTCCCAAACAAACAAAGCCCACCTAGTCACTTaGGTTGCAGCTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: ETPTYTTLPQVSFSQTNKAHLVT*VAAAFS
Trigger: AGAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGC...TTTGTTTGTTTGGGAAAAGGAGACTTGGGGAAGAGTTGTGTATGTGGGTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp CCCAGACTGATGGCTGCCATTCGAGGGAAGACACCTGCAAATAATCTACTTCATCTACAATCACATAAGTaGTCCAACTCGGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: PRLMAAIRGKTPANNLLHLQSHK*SNSASG
Trigger: TCCTGATGCCGAGTTGGATCACTTATGTGATTGTAG...ATGAAGTAGATTATTTGCAGGTGTCTTCCCTCGAATGGCAGCCATCAGTCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR TCA 90 bp TCCTTTACCGACGGCTTGTGTGTTTGTGTTGGGGTGTGCCATCACTTCCTATTTGGGAAAGGTAACTTTTaGCTGTCTTCTAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: SFTDGLCVCVGVCHHFLFGKGNF*LSSNRW
Trigger: CCACCTGTTAGAAGACAGTCAAAAGTTACCTTTCCC...AAATAGGAAGTGATGGCACACCCCAACACAAACACACAAGCCGTCGGTAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp GTTCTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCGGGAAAGGTAACTTTTaGCTGTCTTCTAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: VLRKLFRVPPQTPFSSLSGKGNF*LSSNRW
Trigger: CCACCTGTTAGAAGACAGTCAAAAGTTACCTTTCCC...GCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp GAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCCAATGGAGGTCCTTATTCTaGCATTTTGGAAGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: EYRHRPRFLLLALWHTGQWRSLF*HFGSVL
Trigger: TAAAACACTTCCAAAATGTCAGAATAAGGACCTCCA...TTGGCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTTTCAAGGACTCTTTCTaGCAACTTCCAACAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LRKLFRVPPQTPFSSLSSFKDSF*QLPTAS
Trigger: GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA...AGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp TCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCAAAGAGTGCTTGCTATaGACCTGTAGTTCAATCTTT +
Preference number: 4 (lower is better)
Translates to: SEYRHRPRFLLLALWHTGKECLL*TCSSIF
Trigger: AAAGATTGAACTACAGGTGCATAGCAAGCACTCTTT...GCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp CCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGAAAGAGTGCTTGCTATaGACCTGTAGTTCAATCTTT +
Preference number: 4 (lower is better)
Translates to: PMTSYQPAYTTDGTISMPKECLL*TCSSIF
Trigger: AAAGATTGAACTACAGGTGCATAGCAAGCACTCTTT...CGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp CTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTGTTACCCAGAAAGAGTaGTTGCTATGCACCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LRKLFRVPPQTPFSSLSSVTQKE*LLCTCS
Trigger: ACTACAGGTGCATAGCAAGCACTCTTTCTGGGTAAC...AGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp GCCTTTGCCAGCGTAATTCTTGTCTTTGCCACGTCTAGAGGGGTGGTGACTGCATGGGACTTCTTTAGCTaGTCTATTCAAAAGCAGTTA +
Preference number: 4 (lower is better)
Translates to: AFASVILVFATSRGVVTAWDFFS*SIQKQL
Trigger: TAACTGCTTTTGAATAGAGCAGCTAAAGAAGTCCCA...TGCAGTCACCACCCCTCTAGACGTGGCAAAGACAAGAATTACGCTGGCAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp ATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCGTCCCCTTAAGTCCCTaGTTGTTTAGTTTAGTGGTT +
Preference number: 4 (lower is better)
Translates to: IQANDFIPASLYHGWHNLVPLSP*LFSLVV
Trigger: AACCACTAAACTAAACAAGCAGGGACTTAAGGGGAC...GAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp TTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGCAATATAATTCTAACTaGCATCATCTCAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LAQLVFSTGAYSSDSCSAQYNSN*HHLSPS
Trigger: TGAAGGGCTGAGATGATGGCAGTTAGAATTATATTG...CGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CCA 90 bp TTGCCTTCTGCTGAATCCACCATCAGGTGGCAGGAAATGAAAGATCAGATACAGCTTAACCACTTCAGATaGAACTCGAATCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LPSAESTIRWQEMKDQIQLNHFR*NSNQAG
Trigger: GCCTGCCTGATTCGAGTTCCATCTGAAGTGGTTAAG...CTGTATCTGATCTTTCATTTCCTGCCACCTGATGGTGGATTCAGCAGAAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp AATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTCCTCGATACAACCCTTaGATACCCTCTTCATATAAG +
Preference number: 4 (lower is better)
Translates to: NLHAGILAQLVFSTGAYSPRYNP*IPSSYK
Trigger: CTTATATGAAGAGGGTATCCAAGGGTTGTATCGAGG...ACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp CTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTGAATCCACCATCAGGTaGCAGGAAATGAAAGATCAG +
Preference number: 4 (lower is better)
Translates to: LRKLFRVPPQTPFSSLSSESTIR*QEMKDQ
Trigger: CTGATCTTTCATTTCCTGCCACCTGATGGTGGATTC...AGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp CACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAATTGTGCGTTTTTATaGGTGAAATCTGAGGGTAAT +
Preference number: 4 (lower is better)
Translates to: HNWSSALGPIVQTAAQRKNCAFL*VKSEGN
Trigger: ATTACCCTCAGATTTCACCCATAAAAACGCACAATT...CTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp AGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTGTCAGTATAGTTGGTaGTCCTTCTTTTACAAACGC +
Preference number: 4 (lower is better)
Translates to: SLYHGWHNLHAGILAQLVCQYSW*SFFYKR
Trigger: GCGTTTGTAAAAGAAGGACCACCAACTATACTGACA...GACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp GCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTGTCAGTATAGTTGGTaGTCCTTCTTTTACAAACGC +
Preference number: 4 (lower is better)
Translates to: AYRPMTSYQPAYTTDGTICQYSW*SFFYKR
Trigger: GCGTTTGTAAAAGAAGGACCACCAACTATACTGACA...GATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp GAGGCTGCGAGGAAGCTTGGGTTCAAGCGTCACTCATCTGTACATAGTTGTAACTGGTTAGCTAATGGTTaGACAGAGAAGTCACCACAA +
Preference number: 4 (lower is better)
Translates to: EAARKLGFKRHSSVHSCNWLANG*TEKSPQ
Trigger: TTGTGGTGACTTCTCTGTCCAACCATTAGCTAACCA...GTTACAACTATGTACAGATGAGTGACGCTTGAACCCAAGCTTCCTCGCAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CAA 72 bp TGTGTGTTTGTGTTGGGGTGTGCCATCACTTCCTATTaGTGTAGACAGTCATGCTCAGCCACAGGTGACAAA +
Preference number: 4 (lower is better)
Translates to: CVFVLGCAITSY*CRQSCSATGDK
Trigger: TTTGTCACCTGTGGCTGAGCATGACTGTCTACACAAATAGGAAGTGATGGCACACCCCAACACAAACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp ATCCACCATCAGGTGGCAGGAAATGAAAGATCAGATACAGATCAAATGAAAGCTGCCCACCTAGTCACTTaGGTTGCAGCTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: IHHQVAGNERSDTDQMKAAHLVT*VAAAFS
Trigger: AGAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGC...AGCTTTCATTTGATCTGTATCTGATCTTTCATTTCCTGCCACCTGATGGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp AGAAACACCCACATACACAACTCTTCCCCAAGTCTCCTTTTCCCAAACAAACAAGCCCTCCTTTCAGTCTaGCATGAGAATGGCGAGAAT +
Preference number: 4 (lower is better)
Translates to: RNTHIHNSSPSLLFPNKQALLSV*HENGEN
Trigger: ATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGC...TTGTTTGTTTGGGAAAAGGAGACTTGGGGAAGAGTTGTGTATGTGGGTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp AAGCAAAATCACATACTGTTTGTTTGCTCCAGGGCAGACAACACTGCTAGATTCGCCCTCCTTTCAGTCTaGCATGAGAATGGCGAGAAT +
Preference number: 4 (lower is better)
Translates to: KQNHILFVCSRADNTARFALLSV*HENGEN
Trigger: ATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGC...GAATCTAGCAGTGTTGTCTGCCCTGGAGCAAACAAACAGTATGTGATTTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp GAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCCAAGAAGATGAATCAGCATaGAAAAACCACTTCACATAT +
Preference number: 4 (lower is better)
Translates to: EYRHRPRFLLLALWHTGQEDESA*KNHFTY
Trigger: ATATGTGAAGTGGTTTTTGCATGCTGATTCATCTTC...TTGGCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR GCA 90 bp GGTCCTTCTTTTACAAACGCAGTCATTCTGCCTTTAATTATCTTCCCCCAAAAACATTCCCATCAGCAGTaGTGGAGCCAGCCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GPSFTNAVILPLIIFPQKHSHQQ*WSQPLP
Trigger: TGGCAAAGGCTGGCTCCAGCACTGCTGATGGGAATG...TTTTTGGGGGAAGATAATTAAAGGCAGAATGACTGCGTTTGTAAAAGAAGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp CATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAAAGAGTGCTTGCTATaGACCTGTAGTTCAATCTTT +
Preference number: 4 (lower is better)
Translates to: HAGILAQLVFSTGAYSSDKECLL*TCSSIF
Trigger: AAAGATTGAACTACAGGTGCATAGCAAGCACTCTTT...GTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp AATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTAGGATTTGCTGCTGTTaGTGTTTATTGTTACAGCTT +
Preference number: 4 (lower is better)
Translates to: NDFIPASLYHGWHNLHAGRICCC*CLLLQL
Trigger: AAGCTGTAACAATAAACAGCAACAGCAGCAAATCCT...ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTGGCGTGATTCTGAACTaGAATGTGAAGATGCATTTT +
Preference number: 4 (lower is better)
Translates to: PIPRMAQSPCRYLSTTGLGVILN*NVKMHF
Trigger: AAAATGCATCTTCACATTGCAGTTCAGAATCACGCC...AAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CCA 90 bp GTTCTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCCCTCGATACAACCCTTaGATACCCTCTTCATATAAG +
Preference number: 4 (lower is better)
Translates to: VLRKLFRVPPQTPFSSLSPRYNP*IPSSYK
Trigger: CTTATATGAAGAGGGTATCCAAGGGTTGTATCGAGG...GCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CCA 90 bp ACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCATAAGCCCCCAGAATTGTGCGTTTTTATaGGTGAAATCTGAGGGTAAT +
Preference number: 4 (lower is better)
Translates to: TLSANFQQQAVRSVISPQNCAFL*VKSEGN
Trigger: ATTACCCTCAGATTTCACCCATAAAAACGCACAATT...CTGGGGGCTTATGACCGAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000483224.5
ENST00000632740.1
CDS-3UTR CCA 90 bp GAAACACCCACATACACAACTCTTCCCCAAGTCTCCTTTTCCCAAACAAACAAACACCACAGGGGGCGCTaGACACATCTCTGTAAAATA +
Preference number: 4 (lower is better)
Translates to: ETPTYTTLPQVSFSQTNKHHRGR*THLCKI
Trigger: TATTTTACAGAGATGTGTCCAGCGCCCCCTGTGGTG...TTTGTTTGTTTGGGAAAAGGAGACTTGGGGAAGAGTTGTGTATGTGGGTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp CCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGATAATGTGGCAACTCTaGAAATTGGATATTCCCTTT +
Preference number: 4 (lower is better)
Translates to: PMTSYQPAYTTDGTISMPIMWQL*KLDIPF
Trigger: AAAGGGAATATCCAATTTCCAGAGTTGCCACATTAT...CGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp GGTCCTTCTTTTACAAACGCAGTCATTCTGCCTTTAATTATCTTCCCCCAAAAACGAGCAAAAGATCCGTaGCCGAGATCCAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GPSFTNAVILPLIIFPQKRAKDP*PRSRRE
Trigger: CTCTCTCCTGGATCTCGGCCACGGATCTTTTGCTCG...TTTTTGGGGGAAGATAATTAAAGGCAGAATGACTGCGTTTGTAAAAGAAGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000633701.1
CDS-3UTR GCA 90 bp AATCTGAGGGTAATTAAAACCAGCAGCCTAGTTACCCAGAAAGAGTGCTTGCTATATAGTTCAGACAGCTaGTCAGCGGAAGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: NLRVIKTSSLVTQKECLLYSSDS*SAEEGL
Trigger: CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA...TAGCAAGCACTCTTTCTGGGTAACTAGGCTGCTGGTTTTAATTACCCTCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR GCA 90 bp CTACACCTGGAGCTTGTTAGTCAAGGTCTAAAATCCCTAAGTGTGGTGACCTTTAATCCTTGGGGACTCTaGAGCCTGGTTTTAATGGTA +
Preference number: 4 (lower is better)
Translates to: LHLELVSQGLKSLSVVTFNPWGL*SLVLMV
Trigger: TACCATTAAAACCAGGCTGCAGAGTCCCCAAGGATT...AAAGGTCACCACACTTAGGGATTTTAGACCTTGACTAACAAGCTCCAGGTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354883.11
ENST00000633701.1
CDS-3UTR GCA 90 bp ACAGAAGTGGAGGTGAGGCTTGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCTTTATTGTTACAGCTTaGCTAGTGACTTTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: TEVEVRLVSASRTLSANFFIVTA*LVTFPG
Trigger: TCCAGGAAAAGTCACTAGGCAAGCTGTAACAATAAA...GAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACCTCCACTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp CTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGGATTTGCTGCTGTTaGTGTTTATTGTTACAGCTT +
Preference number: 4 (lower is better)
Translates to: LYHGWHNLHAGILAQLVFRICCC*CLLLQL
Trigger: AAGCTGTAACAATAAACAGCAACAGCAGCAAATCCT...GAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp AGGTTCATTTATAAATGTCAGTATAGTTGGTGGTCCTTCTTTTACAAACGCAGTCACAACAACTGCACGTaGAACGCGAGACACCTGGGC +
Preference number: 4 (lower is better)
Translates to: RFIYKCQYSWWSFFYKRSHNNCT*NARHLG
Trigger: GCCCAGGTGTCTCGCGTTGCACGTGCAGTTGTTGTG...ACTGCGTTTGTAAAAGAAGGACCACCAACTATACTGACATTTATAAATGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633701.1
CDS-3UTR CCA 90 bp AGCTCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATAATTGTGCGTTTTTATaGGTGAAATCTGAGGGTAAT +
Preference number: 4 (lower is better)
Translates to: SSLAYRPMTSYQPAYTTDNCAFL*VKSEGN
Trigger: ATTACCCTCAGATTTCACCCATAAAAACGCACAATT...ATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp ACCAAAAAGCTAGGTTTTGTCTACCTCAGTTCTTGTCATACCAATCTCTACGGGCTTGTGTGTTTGTGTTaGGGTGTGCCATCACTTCCT +
Preference number: 4 (lower is better)
Translates to: TKKLGFVYLSSCHTNLYGLVCLC*GVPSLP
Trigger: AGGAAGTGATGGCACACCCCAACACAAACACACAAG...CCCGTAGAGATTGGTATGACAAGAACTGAGGTAGACAAAACCTAGCTTTTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
3UTR CAA 72 bp TGGCACCAAAAAGCTAGGTTTTGTCTACCTCAGTTCTaGTCATACCAATCTCTACGGGAAAGAGAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: WHQKARFCLPQF*SYQSLREREVG
Trigger: TCCTACCTCTCTTTCCCGTAGAGATTGGTATGACAAGAACTGAGGTAGACAAAACCTAGCTTTTTGGTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp GATGTTGCTATTTGCTTGAATCAACAATCCATGGATTGTTGTAAGCCTTTGGTTAGATCTCTGCAGTCATaGCCAGTGGTGCCTGACTGT +
Preference number: 4 (lower is better)
Translates to: DVAICLNQQSMDCCKPLVRSLQS*PVVPDC
Trigger: ACAGTCAGGCACCACTGGTCATGACTGCAGAGATCT...AACCAAAGGCTTACAACAATCCATGGATTGTTGATTCAAGCAAATAGCAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR TCA 90 bp GTTCTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTGGAGGTCCTTATTCTaGCATTTTGGAAGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: VLRKLFRVPPQTPFSSLSWRSLF*HFGSVL
Trigger: TAAAACACTTCCAAAATGTCAGAATAAGGACCTCCA...GCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CCA 90 bp CTGGAGCTTGTTAGTCAAGGTCTAAAATCCCTAAGTGTGGTGACCTTTCCATTTGAATCCACCATCAGGTaGCAGGAAATGAAAGATCAG +
Preference number: 4 (lower is better)
Translates to: LELVSQGLKSLSVVTFPFESTIR*QEMKDQ
Trigger: CTGATCTTTCATTTCCTGCCACCTGATGGTGGATTC...AAATGGAAAGGTCACCACACTTAGGGATTTTAGACCTTGACTAACAAGCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp GTTTGCTCCAGGGCAGACAACACTGCTAGATTCCTGACATTTTGTTTTGAATTTTCAGGTGGCAGGAAATaGAAGATCAGATACAGATCA +
Preference number: 4 (lower is better)
Translates to: VCSRADNTARFLTFCFEFSGGRK*KIRYRS
Trigger: TGATCTGTATCTGATCTTTCATTTCCTGCCACCTGA...AAATTCAAAACAAAATGTCAGGAATCTAGCAGTGTTGTCTGCCCTGGAGCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR TCA 90 bp GATGTTGCTATTTGCTTGAATCAACAATCCATGGATTGTTGTAAGCCTTTGGTTCAGTTTCTGTTAGCATaGACAGCAGCTGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: DVAICLNQQSMDCCKPLVQFLLA*TAAGSS
Trigger: AGAGGAACCAGCTGCTGTTCATGCTAACAGAAACTG...AACCAAAGGCTTACAACAATCCATGGATTGTTGATTCAAGCAAATAGCAACATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR GCA 90 bp GTTTGCTCCAGGGCAGACAACACTGCTAGATTCCTGACATTTTGTTTTGAATTTAAAGAGTGCTTGCTATaGACCTGTAGTTCAATCTTT +
Preference number: 4 (lower is better)
Translates to: VCSRADNTARFLTFCFEFKECLL*TCSSIF
Trigger: AAAGATTGAACTACAGGTGCATAGCAAGCACTCTTT...AAATTCAAAACAAAATGTCAGGAATCTAGCAGTGTTGTCTGCCCTGGAGCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
3UTR CAA 72 bp ATTAAAACCAGCAGCCTAGTTACCCAGAAAGAGTGCTaGCTATGCACCTGTAGTTCAATCTTTCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: IKTSSLVTQKEC*LCTCSSIFLSF
Trigger: AAAAGAAAGAAAGATTGAACTACAGGTGCATAGCAAGCACTCTTTCTGGGTAACTAGGCTGCTGGTTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CCA 90 bp AGGTTCATTTATAAATGTCAGTATAGTTGGTGGTCCTTCTTTTACAAACGCAGTTGTCAGTATAGTTGGTaGTCCTTCTTTTACAAACGC +
Preference number: 4 (lower is better)
Translates to: RFIYKCQYSWWSFFYKRSCQYSW*SFFYKR
Trigger: GCGTTTGTAAAAGAAGGACCACCAACTATACTGACA...ACTGCGTTTGTAAAAGAAGGACCACCAACTATACTGACATTTATAAATGAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS CCA 90 bp CTACCCCACCAGCCACCAGCGCTGCCACGAACCCCGGCCGGTCCATaGTCGCTCAGACCTCGTCAAGGCTACAATCCAAGCCGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: LPHQPPALPRTPAGP*SLRPRQGYNPSRSR
Trigger: TCTGCTCCGGCTTGGATTGTAGCCTTGACGAGGTCTGAGCGACCATGGACCGGCCGGGGTTCGTGGCAGCGCTGGTGGCTGGTGGGGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354883.11
ENST00000633701.1
ENST00000676754.1
CDS CCA 90 bp GCTACAATCCAAGCCGGAGCAGAAGCGGATCACGTCCTCGCGCGCTaGGCGCCGCCATGTTTGAGGCGGGTCTGTCTTGAACTTCCGGGA +
Preference number: 5 (lower is better)
Translates to: ATIQAGAEADHVLAR*APPCLRRVCLELPG
Trigger: TCCCGGAAGTTCAAGACAGACCCGCCTCAAACATGGCGGCGCCCAGCGCGCGAGGACGTGATCCGCTTCTGCTCCGGCTTGGATTGTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CAA 90 bp CCAGCCCCTGTGACCGCCAGACCCCATGCAGGACAGAGAGCACATTCCCATCAGTCAGCGGAAGAGGGTTaGCACTGCAGGCCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: PAPVTARPHAGQRAHSHQSAEEG*HCRPLS
Trigger: AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGA...CTGATGGGAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTCACAGGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000634032.1
CDS GCA 90 bp CCAGGCAGCTGCCGACCGACCCTCTGCAAAGGGAGGCCACTGCTTTaGTCTTGCAAGAAAATCCCTGGTATATGGTCCCCTGCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PGSCRPTLCKGRPLL*SCKKIPGIWSPASP
Trigger: GGGGCTGGCAGGGGACCATATACCAGGGATTTTCTTGCAAGAGCAAAGCAGTGGCCTCCCTTTGCAGAGGGTCGGTCGGCAGCTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS CCA 90 bp AAAAATGCAGCAGCACCAGCGCTGCCACGAACCCCGGCCGGTCCATaGTCGCTCAGACCTCGTCAAGGCTACAATCCAAGCCGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: KNAAAPALPRTPAGP*SLRPRQGYNPSRSR
Trigger: TCTGCTCCGGCTTGGATTGTAGCCTTGACGAGGTCTGAGCGACCATGGACCGGCCGGGGTTCGTGGCAGCGCTGGTGCTGCTGCATTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336733.10
ENST00000632575.1
CDS-3UTR CAA 90 bp CCAGCCCCTGTGACCGCCAGACCCCATGCAGGACAGAGAGCACATTCCCATCAGCCCATGACCTTTGCCTaGCACAGTGGAGCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: PAPVTARPHAGQRAHSHQPMTFA*HSGAEQ
Trigger: CTGCTCAGCTCCACTGTGCAAGGCAAAGGTCATGGG...CTGATGGGAATGTGCTCTCTGTCCTGCATGGGGTCTGGCGGTCACAGGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp GCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTCTGCAGGCCCCTCTCTaGACAGAAGTGGAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: AQRKRVCTAGPSLDRSGGLQAPL*TEVEVR
Trigger: CCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAG...ACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CAA 90 bp CTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCTCAGCGGAAGAGGGTTaGCACTGCAGGCCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: LGPIVQTAAQRKRVCTAGSAEEG*HCRPLS
Trigger: AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGA...GCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CAA 90 bp AGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCCTGCAGGCCCCTCTCTaGACAGAAGTGGAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: RVCTAGPSLDRSGGEACLLQAPL*TEVEVR
Trigger: CCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAG...GAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CAA 90 bp CTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCTGCCGGCTGGCTGGTTaGAGAACTGAGAAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LGPIVQTAAQRKRVCTAGCRLAG*RTEKWW
Trigger: CCACCACTTCTCAGTTCTCAAACCAGCCAGCCGGCA...GCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp GCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTTGCCGGCTGGCTGGTTaGAGAACTGAGAAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: AQRKRVCTAGPSLDRSGGCRLAG*RTEKWW
Trigger: CCACCACTTCTCAGTTCTCAAACCAGCCAGCCGGCA...ACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp ACCCAGCCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATGCGGCAGTGGCGTGATCTaGGCTCACTGCAAGCTCCGC +
Preference number: 5 (lower is better)
Translates to: TQPETTMAMVGKDIRFTCGSGVI*AHCKLR
Trigger: GCGGAGCTTGCAGTGAGCCAAGATCACGCCACTGCC...GCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGGCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp CCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTTGGGCGCCGCCATGTTaGAGGCGGGTCTGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: PIVQTAAQRKRVCTAGPSWAPPC*RRVCLE
Trigger: TTCAAGACAGACCCGCCTCAAACATGGCGGCGCCCA...AGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS GCA 90 bp GAAGTCCAGGCAGCTGCCGACCGACCCTCTGCAAAGGGAGGCCACTaGTTTGCTCTTGCAAGAAAATCCCTGGTATATGGTCCCCTGCCA +
Preference number: 5 (lower is better)
Translates to: EVQAAADRPSAKGGH*FALARKSLVYGPLP
Trigger: TGGCAGGGGACCATATACCAGGGATTTTCTTGCAAGAGCAAAGCAGTGGCCTCCCTTTGCAGAGGGTCGGTCGGCAGCTGCCTGGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS-3UTR CAA 90 bp TCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCCTGCAGGCCCCTCTCTaGACAGAAGTGGAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: SSALGPIVQTAAQRKRVCLQAPL*TEVEVR
Trigger: CCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAG...GCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CAA 90 bp TCCTTTCAGTCTGACATGAGAATGGCGAGAATGGCTCACCCACCGTGCCCTCCTTCAGCGGAAGAGGGTTaGCACTGCAGGCCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: SFQSDMRMARMAHPPCPPSAEEG*HCRPLS
Trigger: AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGA...AGGAGGGCACGGTGGGTGAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CAA 90 bp CTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCGGCCCACCTAGTCACTaGAGTTGCAGCTGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: LGPIVQTAAQRKRVCTAGGPPSH*SCSCFL
Trigger: GAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGCC...GCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
CDS-3UTR CAA 90 bp GCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGCGGAAGCCCAGTACTaGCTTGTTTCCAATGGCCAC +
Preference number: 5 (lower is better)
Translates to: AQRKRVCTAGPSLDRSGGAEAQY*LVSNGH
Trigger: GTGGCCATTGGAAACAAGCAAGTACTGGGCTTCCGC...ACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp GTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTGCTTTCCTGCAGCAGCGTaGTGTGCAGCTAGACGGAGG +
Preference number: 5 (lower is better)
Translates to: VCTAGPSLDRSGGEACLCFPAAA*CAARRR
Trigger: CCTCCGTCTAGCTGCACACAACGCTGCTGCAGGAAA...GCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CAA 90 bp GTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTGCCCCAGCGCTTTACAGTaGACCCTTCTCTCCCCAGAT +
Preference number: 5 (lower is better)
Translates to: VCTAGPSLDRSGGEACLCPSALQ*TLLSPD
Trigger: ATCTGGGGAGAGAAGGGTCAACTGTAAAGCGCTGGG...GCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp CCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCGACGGCTTGTGTGTTaGTGTTGGGGTGTGCCATCA +
Preference number: 5 (lower is better)
Translates to: PIVQTAAQRKRVCTAGPSRRLVC*CWGVPS
Trigger: TGATGGCACACCCCAACACAAACACACAAGCCGTCG...AGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp TCAGGCAGTCCAGAGCGCGCGGAAGCCCAGTACTTGCTTGTTTCCAATGGCCACTCCTTTACCGACGGCTaGTGTGTTTGTGTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: SGSPERAEAQYLLVSNGHSFTDG*CVCVGV
Trigger: CACCCCAACACAAACACACAAGCCGTCGGTAAAGGA...GTGGCCATTGGAAACAAGCAAGTACTGGGCTTCCGCGCGCTCTGGACTGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp AGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGGGCAGTGGCGTGATCTaGGCTCACTGCAAGCTCCGC +
Preference number: 5 (lower is better)
Translates to: RPMTSYQPAYTTDGTISMGSGVI*AHCKLR
Trigger: GCGGAGCTTGCAGTGAGCCAAGATCACGCCACTGCC...CATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp CTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTAGCCTCCCCACACCTTaGACTCTAATCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LVFSTGAYSSDSCSAEEGSLPTP*TLILLL
Trigger: GAGGAGGAGGATTAGAGTCAAAGGTGTGGGGAGGCT...ACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483224.5
ENST00000632740.1
CDS-3UTR CAA 90 bp GCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCCTGCAGGCCCCTCTCTaGACAGAAGTGGAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: AYRPMTSYQPAYTTDGTILQAPL*TEVEVR
Trigger: CCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAG...GATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CAA 90 bp GGTGAGGCTTGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTCAGCGGAAGAGGGTTaGCACTGCAGGCCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: GEACLCFKDSFCQLPTASSAEEG*HCRPLS
Trigger: AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGA...GCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACAAGCCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
CDS-3UTR CAA 90 bp TATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTGGCCCACCTAGTCACTaGAGTTGCAGCTGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: YSSDSCSAEEGLHCRPLSGPPSH*SCSCFL
Trigger: GAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGCC...AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
CDS-3UTR CAA 90 bp CCAATCTCTACGGGAAAGAGAGGTAGGAGAGGCTGCGAGGAAGCTTGGGTTCAATCTTACGGCATCTGGTaGGTGGGGCTGAGGATGCAC +
Preference number: 5 (lower is better)
Translates to: PISTGKRGRRGCEEAWVQSYGIW*VGLRMH
Trigger: GTGCATCCTCAGCCCCACCAACCAGATGCCGTAAGA...TTGAACCCAAGCTTCCTCGCAGCCTCTCCTACCTCTCTTTCCCGTAGAGATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp AGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTCCTTTACCGACGGCTaGTGTGTTTGTGTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: RVCTAGPSLDRSGGEACLSFTDG*CVCVGV
Trigger: CACCCCAACACAAACACACAAGCCGTCGGTAAAGGA...GAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp CGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTCTCCTCCCCCAGGATTaGCTGCTGTTGCTGTTTATT +
Preference number: 5 (lower is better)
Translates to: RKRVCTAGPSLDRSGGEALLPQD*LLLLFI
Trigger: AATAAACAGCAACAGCAGCAAATCCTGGGGGAGGAG...AGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp GCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTCTCCTCCCCCAGGATTaGCTGCTGTTGCTGTTTATT +
Preference number: 5 (lower is better)
Translates to: AQRKRVCTAGPSLDRSGGLLPQD*LLLLFI
Trigger: AATAAACAGCAACAGCAGCAAATCCTGGGGGAGGAG...ACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp AGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTGGGCGCCGCCATGTTaGAGGCGGGTCTGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: SLYHGWHNLHAGILAQLVWAPPC*RRVCLE
Trigger: TTCAAGACAGACCCGCCTCAAACATGGCGGCGCCCA...GACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CAA 90 bp CTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCCTGCAGGCCCCTCTCTaGACAGAAGTGGAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: LYHGWHNLHAGILAQLVFLQAPL*TEVEVR
Trigger: CCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAG...GAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CAA 90 bp AATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGCGGAAGAGGGTTaGCACTGCAGGCCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: NLHAGILAQLVFSTGAYSSAEEG*HCRPLS
Trigger: AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGA...ACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CAA 90 bp GTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTGTCTCTGCGAGGTTCTGAGGAAATaGTTCAGAGTACCGCCACAG +
Preference number: 5 (lower is better)
Translates to: VCTAGPSLDRSGGEACLCEVLRK*FRVPPQ
Trigger: CTGTGGCGGTACTCTGAACAATTTCCTCAGAACCTC...GCAGAGACAAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CAA 90 bp CCCGGACTCCACAGAGCTACAGCCTGCATCTTCATTAACTTCAGGCAGTCCAGAGGCCCACCTAGTCACTaGAGTTGCAGCTGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: PGLHRATACIFINFRQSRGPPSH*SCSCFL
Trigger: GAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGCC...TCTGGACTGCCTGAAGTTAATGAAGATGCAGGCTGTAGCTCTGTGGAGTCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp TGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCAGTCGCTCACAGGACTaGGATCGTGCCCTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: CLCFKDSFCQLPTASCAFSRSQD*DRALLH
Trigger: GTGCAGGAGGGCACGATCCAAGTCCTGTGAGCGACT...GAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp ATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCAGGCTGCGAGGAAGCTaGGGTTCAAGCGTCACTCAT +
Preference number: 5 (lower is better)
Translates to: MAQSPCRYLSTTGLQHWGRLRGS*GSSVTH
Trigger: ATGAGTGACGCTTGAACCCAAGCTTCCTCGCAGCCT...GCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp AGCTCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATCCCATGACCTTTGCCTaGCACAGTGGAGCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: SSLAYRPMTSYQPAYTTDPMTFA*HSGAEQ
Trigger: CTGCTCAGCTCCACTGTGCAAGGCAAAGGTCATGGG...ATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp CATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCAGCCTCCCCACACCTTaGACTCTAATCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: HTSQPIPRMAQSPCRYLSSLPTP*TLILLL
Trigger: GAGGAGGAGGATTAGAGTCAAAGGTGTGGGGAGGCT...GCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483224.5
ENST00000632740.1
CDS-3UTR CAA 90 bp TTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCATAAGTCAGCGGAAGAGGGTTaGCACTGCAGGCCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: FKDSFCQLPTASCAFGHKSAEEG*HCRPLS
Trigger: AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGA...CTTATGACCGAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
CDS-3UTR CAA 90 bp AGACTGATGGCTGCCATTCGAGGGAAGACACCTGCAAATAATCCTGCCAGCCCCGAGGTTCTGAGGAAATaGTTCAGAGTACCGCCACAG +
Preference number: 5 (lower is better)
Translates to: RLMAAIRGKTPANNPASPEVLRK*FRVPPQ
Trigger: CTGTGGCGGTACTCTGAACAATTTCCTCAGAACCTC...GGGGCTGGCAGGATTATTTGCAGGTGTCTTCCCTCGAATGGCAGCCATCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000634032.1
CDS-3UTR CAA 90 bp CCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTACCCAGAAAGAGTGCTaGCTATGCACCTGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: PIVQTAAQRKRVCTAGPSTQKEC*LCTCSS
Trigger: TGAACTACAGGTGCATAGCAAGCACTCTTTCTGGGT...AGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CAA 90 bp GCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCATAAGCCCCCAGAAAGATGAAGGCCCACCTAGTCACTaGAGTTGCAGCTGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: ANFQQQAVRSVISPQKDEGPPSH*SCSCFL
Trigger: GAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGCC...TTCATCTTTCTGGGGGCTTATGACCGAACGCACAGCTTGCTGTTGGAAGTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000634032.1
CDS-3UTR CAA 90 bp AGCTGGCCCAGGCCCTCCTTTCAGTCTGACATGAGAATGGCGAGAATGGCTCACTCACATACTGTTTGTTaGCTCCAGGGCAGACAACAC +
Preference number: 5 (lower is better)
Translates to: SWPRPSFQSDMRMARMAHSHTVC*LQGRQH
Trigger: GTGTTGTCTGCCCTGGAGCAAACAAACAGTATGTGA...GTGAGCCATTCTCGCCATTCTCATGTCAGACTGAAAGGAGGGCCTGGGCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CAA 90 bp GTTCTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCAGTCGCTCACAGGACTaGGATCGTGCCCTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: VLRKLFRVPPQTPFSSLSSRSQD*DRALLH
Trigger: GTGCAGGAGGGCACGATCCAAGTCCTGTGAGCGACT...GCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp GCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCAAGCCCAGTACTTGCTaGTTTCCAATGGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: AGILAQLVFSTGAYSSDSKPSTC*FPMATS
Trigger: GGAGGTGGCCATTGGAAACAAGCAAGTACTGGGCTT...GCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp AATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTGCGGAAGCCCAGTACTaGCTTGTTTCCAATGGCCAC +
Preference number: 5 (lower is better)
Translates to: NDFIPASLYHGWHNLHAGAEAQY*LVSNGH
Trigger: GTGGCCATTGGAAACAAGCAAGTACTGGGCTTCCGC...ACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp TATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTTTTTGGCCAGCTGCTaGTTTGCCCCATGGGTATTG +
Preference number: 5 (lower is better)
Translates to: YSSDSCSAEEGLHCRPLSFLASC*FAPWVL
Trigger: CAATACCCATGGGGCAAACAAGCAGCTGGCCAAAAA...AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp TTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTTTTTGGCCAGCTGCTaGTTTGCCCCATGGGTATTG +
Preference number: 5 (lower is better)
Translates to: FSTGAYSSDSCSAEEGLHFLASC*FAPWVL
Trigger: CAATACCCATGGGGCAAACAAGCAGCTGGCCAAAAA...GTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp CTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAGCTTGTGTGTTTGTGTaGGGGTGTGCCATCACTTCC +
Preference number: 5 (lower is better)
Translates to: LAYRPMTSYQPAYTTDGTACVFV*GCAITS
Trigger: GGAAGTGATGGCACACCCCAACACAAACACACAAGC...TGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp AGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCGACGGCTTGTGTGTTaGTGTTGGGGTGTGCCATCA +
Preference number: 5 (lower is better)
Translates to: RPMTSYQPAYTTDGTISMRRLVC*CWGVPS
Trigger: TGATGGCACACCCCAACACAAACACACAAGCCGTCG...CATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp AATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTTTCCTGCAGCAGCGTaGTGTGCAGCTAGACGGAGG +
Preference number: 5 (lower is better)
Translates to: NLHAGILAQLVFSTGAYSFPAAA*CAARRR
Trigger: CCTCCGTCTAGCTGCACACAACGCTGCTGCAGGAAA...ACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS CCA 90 bp TCTTGTAGAAGCAGATACCTGTGCCCTCTGCTTAACCACTTCAGATaGAACTCGAATCAGGCAGGCAACCACTTCTCCAGCAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: SCRSRYLCPLLNHFR*NSNQAGNHFSSRGS
Trigger: GCTGCCTCTGCTGGAGAAGTGGTTGCCTGCCTGATTCGAGTTCCATCTGAAGTGGTTAAGCAGAGGGCACAGGTATCTGCTTCTACAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CAA 90 bp GAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCCAAGAGGTTCTGAGGAAATaGTTCAGAGTACCGCCACAG +
Preference number: 5 (lower is better)
Translates to: EYRHRPRFLLLALWHTGQEVLRK*FRVPPQ
Trigger: CTGTGGCGGTACTCTGAACAATTTCCTCAGAACCTC...TTGGCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CAA 90 bp GCCTTTGCCAGCGTAATTCTTGTCTTTGCCACGTCTAGAGGGGTGGTGACTGCAGAGGTTCTGAGGAAATaGTTCAGAGTACCGCCACAG +
Preference number: 5 (lower is better)
Translates to: AFASVILVFATSRGVVTAEVLRK*FRVPPQ
Trigger: CTGTGGCGGTACTCTGAACAATTTCCTCAGAACCTC...TGCAGTCACCACCCCTCTAGACGTGGCAAAGACAAGAATTACGCTGGCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000634032.1
CDS-3UTR CAA 90 bp CATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCGAGGTTCTGAGGAAATaGTTCAGAGTACCGCCACAG +
Preference number: 5 (lower is better)
Translates to: HTSQPIPRMAQSPCRYLSEVLRK*FRVPPQ
Trigger: CTGTGGCGGTACTCTGAACAATTTCCTCAGAACCTC...GCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CAA 90 bp TCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACCCAGAAAGAGTGCTaGCTATGCACCTGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: SSALGPIVQTAAQRKRVCTQKEC*LCTCSS
Trigger: TGAACTACAGGTGCATAGCAAGCACTCTTTCTGGGT...GCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CAA 90 bp GAGGCTGCGAGGAAGCTTGGGTTCAAGCGTCACTCATCTGTACATAGTTGTAACGGCCCACCTAGTCACTaGAGTTGCAGCTGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: EAARKLGFKRHSSVHSCNGPPSH*SCSCFL
Trigger: GAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGCC...GTTACAACTATGTACAGATGAGTGACGCTTGAACCCAAGCTTCCTCGCAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp ATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCGGCCCACCTAGTCACTaGAGTTGCAGCTGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: IQANDFIPASLYHGWHNLGPPSH*SCSCFL
Trigger: GAGAAAGCAGCTGCAACTCAAGTGACTAGGTGGGCC...GAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354883.11
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
ENST00000634032.1
CDS-3UTR CAA 90 bp TGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTCACATACTGTTTGTTaGCTCCAGGGCAGACAACAC +
Preference number: 5 (lower is better)
Translates to: WSSALGPIVQTAAQRKRVSHTVC*LQGRQH
Trigger: GTGTTGTCTGCCCTGGAGCAAACAAACAGTATGTGA...AACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CAA 90 bp ATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGAGGCTGCGAGGAAGCTaGGGTTCAAGCGTCACTCAT +
Preference number: 5 (lower is better)
Translates to: IPRMAQSPCRYLSTTGLQRLRGS*GSSVTH
Trigger: ATGAGTGACGCTTGAACCCAAGCTTCCTCGCAGCCT...CTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp AGTTGTAACTCCCATGTGGAGTATCAGTCGCTCACAGGACTTGGATCGTGCCCTAAGCCCAGTACTTGCTaGTTTCCAATGGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: SCNSHVEYQSLTGLGSCPKPSTC*FPMATS
Trigger: GGAGGTGGCCATTGGAAACAAGCAAGTACTGGGCTT...AGGGCACGATCCAAGTCCTGTGAGCGACTGATACTCCACATGGGAGTTACAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp CCCGGACTCCACAGAGCTACAGCCTGCATCTTCATTAACTTCAGGCAGTCCAGATGGACTTTAGCAAGGTaGTATCACCCGGACTCCACA +
Preference number: 5 (lower is better)
Translates to: PGLHRATACIFINFRQSRWTLAR*YHPDST
Trigger: TGTGGAGTCCGGGTGATACAACCTTGCTAAAGTCCA...TCTGGACTGCCTGAAGTTAATGAAGATGCAGGCTGTAGCTCTGTGGAGTCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp CCCGGACTCCACAGAGCTACAGCCTGCATCTTCATTAACTTCAGGCAGTCCAGAGACTCTAACCCATCTTaGGCGCTGTCCTTCAGAACA +
Preference number: 5 (lower is better)
Translates to: PGLHRATACIFINFRQSRDSNPS*ALSFRT
Trigger: TGTTCTGAAGGACAGCGCCAAAGATGGGTTAGAGTC...TCTGGACTGCCTGAAGTTAATGAAGATGCAGGCTGTAGCTCTGTGGAGTCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp GTTCTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTTACGGCATCTGGTaGGTGGGGCTGAGGATGCAC +
Preference number: 5 (lower is better)
Translates to: VLRKLFRVPPQTPFSSLSSYGIW*VGLRMH
Trigger: GTGCATCCTCAGCCCCACCAACCAGATGCCGTAAGA...GCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp TTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGTGGTGCCTGACTGTTTaGTGTGAAAGTCAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: LAQLVFSTGAYSSDSCSAWCLTV*CESQQA
Trigger: TGCCTGCTGACTTTCACACAAAACAGTCAGGCACCA...CGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp CCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATGCTCAGCATGGTGCCTGACTGTTTaGTGTGAAAGTCAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: PETTMAMVGKDIRFTCSAWCLTV*CESQQA
Trigger: TGCCTGCTGACTTTCACACAAAACAGTCAGGCACCA...TGCTGAGCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp GGAAGAGGGTTTGCACTGCAGGCCCCTCTCTTGACAGAAGTGGAGGTGAGGCTTTGGCAACTCTGGAAATaGGATATTCCCTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: GRGFALQAPLLTEVEVRLWQLWK*DIPFLL
Trigger: GAGGAGAAAGGGAATATCCAATTTCCAGAGTTGCCA...AAGCCTCACCTCCACTTCTGTCAAGAGAGGGGCCTGCAGTGCAAACCCTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS TCA 90 bp AGCAAAAGATCCGTGGCCGAGATCCAGGAGAGAGCAGCGGTAGAATaGGGCCGGCGTGATTCTGAACTGCAATGTGAAGATGCATTTTCT +
Preference number: 5 (lower is better)
Translates to: SKRSVAEIQERAAVE*GRRDSELQCEDAFS
Trigger: AGAAAATGCATCTTCACATTGCAGTTCAGAATCACGCCGGCCTCATTCTACCGCTGCTCTCTCCTGGATCTCGGCCACGGATCTTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS CCA 90 bp TCTTGTAGAAGCAGATACCTGTGCCCTCTGCTTAACCACTTCAGATaGAACTCGAATCAGGCAGGCAACATCCGTAGAGGCAAGCTGACC +
Preference number: 5 (lower is better)
Translates to: SCRSRYLCPLLNHFR*NSNQAGNIRRGKLT
Trigger: GGTCAGCTTGCCTCTACGGATGTTGCCTGCCTGATTCGAGTTCCATCTGAAGTGGTTAAGCAGAGGGCACAGGTATCTGCTTCTACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484768.1
ENST00000633644.1
CDS-3UTR CAA 90 bp AGCTCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGAGGTTCTGAGGAAATaGTTCAGAGTACCGCCACAG +
Preference number: 5 (lower is better)
Translates to: SSLAYRPMTSYQPAYTTDEVLRK*FRVPPQ
Trigger: CTGTGGCGGTACTCTGAACAATTTCCTCAGAACCTC...ATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CAA 90 bp CAGCTGCTTTCTCTCACACACCACAGGGGGCGCTGGACACATCTCTGTAAAATAGAGGTTCTGAGGAAATaGTTCAGAGTACCGCCACAG +
Preference number: 5 (lower is better)
Translates to: QLLSLTHHRGRWTHLCKIEVLRK*FRVPPQ
Trigger: CTGTGGCGGTACTCTGAACAATTTCCTCAGAACCTC...TATTTTACAGAGATGTGTCCAGCGCCCCCTGTGGTGTGTGAGAGAAAGCAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CAA 90 bp ATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCAGCCTTACTAAATCCTaGGGGACTCTGCAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: IQANDFIPASLYHGWHNLSLTKS*GTLQPG
Trigger: ACCAGGCTGCAGAGTCCCCAAGGATTTAGTAAGGCT...GAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354883.11
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CAA 90 bp ACCCAGCCAGAAACCACCATGGCTATGGTGGGCAAGGACATCCGGTTTACATGCTGTCTACCTCAGTTCTaGTCATACCAATCTCTACGG +
Preference number: 5 (lower is better)
Translates to: TQPETTMAMVGKDIRFTCCLPQF*SYQSLR
Trigger: CCGTAGAGATTGGTATGACAAGAACTGAGGTAGACA...GCATGTAAACCGGATGTCCTTGCCCACCATAGCCATGGTGGTTTCTGGCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp TCCTTTACCGACGGCTTGTGTGTTTGTGTTGGGGTGTGCCATCACTTCCTATTTCCCAGCGCTTTACAGTaGACCCTTCTCTCCCCAGAT +
Preference number: 5 (lower is better)
Translates to: SFTDGLCVCVGVCHHFLFPSALQ*TLLSPD
Trigger: ATCTGGGGAGAGAAGGGTCAACTGTAAAGCGCTGGG...AAATAGGAAGTGATGGCACACCCCAACACAAACACACAAGCCGTCGGTAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp TCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCATCCCCAGGAATGTATaGGACCTTTTCAAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: SLAYRPMTSYQPAYTTDGIPRNV*DLFKAH
Trigger: GTGGGCTTTGAAAAGGTCCAATACATTCCTGGGGAT...GCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp CTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCGCTTGTGTGTTTGTGTaGGGGTGTGCCATCACTTCC +
Preference number: 5 (lower is better)
Translates to: LYHGWHNLHAGILAQLVFACVFV*GCAITS
Trigger: GGAAGTGATGGCACACCCCAACACAAACACACAAGC...GAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp ATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCTTTCAACTCATGGCCTaGCTTTCTCAGATCCCGCTA +
Preference number: 5 (lower is better)
Translates to: MAQSPCRYLSTTGLQHWGFQLMA*LSQIPL
Trigger: TAGCGGGATCTGAGAAAGCAAGGCCATGAGTTGAAA...GCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CAA 90 bp CTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACATTTCAACTCATGGCCTaGCTTTCTCAGATCCCGCTA +
Preference number: 5 (lower is better)
Translates to: LAYRPMTSYQPAYTTDGTFQLMA*LSQIPL
Trigger: TAGCGGGATCTGAGAAAGCAAGGCCATGAGTTGAAA...TGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS GCA 90 bp ATGAGCATGAACTTCATCAGGGCTCCACTCGAACCGCCTTCTCTCTaGTTTCAACTCATGGCCTTGCTTTCTCAGATCCCGCTACCATTT +
Preference number: 5 (lower is better)
Translates to: MSMNFIRAPLEPPSL*FQLMALLSQIPLPF
Trigger: AAATGGTAGCGGGATCTGAGAAAGCAAGGCCATGAGTTGAAAGCAGAGAGAAGGCGGTTCGAGTGGAGCCCTGATGAAGTTCATGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CAA 90 bp CTGGAGCTTGTTAGTCAAGGTCTAAAATCCCTAAGTGTGGTGACCTTTCCATTTTCAGCGGAAGAGGGTTaGCACTGCAGGCCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: LELVSQGLKSLSVVTFPFSAEEG*HCRPLS
Trigger: AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGA...AAATGGAAAGGTCACCACACTTAGGGATTTTAGACCTTGACTAACAAGCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CAA 90 bp AATCTGAGGGTAATTAAAACCAGCAGCCTAGTTACCCAGAAAGAGTGCTTGCTATCAGCGGAAGAGGGTTaGCACTGCAGGCCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: NLRVIKTSSLVTQKECLLSAEEG*HCRPLS
Trigger: AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGA...TAGCAAGCACTCTTTCTGGGTAACTAGGCTGCTGGTTTTAATTACCCTCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CAA 90 bp ATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGAGGTTCTGAGGAAATaGTTCAGAGTACCGCCACAG +
Preference number: 5 (lower is better)
Translates to: ILAQLVFSTGAYSSDSCSEVLRK*FRVPPQ
Trigger: CTGTGGCGGTACTCTGAACAATTTCCTCAGAACCTC...TGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CAA 90 bp TGTCTCTGCTTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCGAGGTTCTGAGGAAATaGTTCAGAGTACCGCCACAG +
Preference number: 5 (lower is better)
Translates to: CLCFKDSFCQLPTASCAFEVLRK*FRVPPQ
Trigger: CTGTGGCGGTACTCTGAACAATTTCCTCAGAACCTC...GAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAAGCAGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632740.1
ENST00000633238.1
ENST00000634032.1
CDS-3UTR CAA 90 bp CTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTAGCCTTACTAAATCCTaGGGGACTCTGCAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LRKLFRVPPQTPFSSLSSSLTKS*GTLQPG
Trigger: ACCAGGCTGCAGAGTCCCCAAGGATTTAGTAAGGCT...AGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354883.11
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CAA 90 bp TTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACAGAATTATAACCATCTaGCCTTCTGCTGAATCCACC +
Preference number: 5 (lower is better)
Translates to: FSTGAYSSDSCSAEEGLHRIITI*PSAEST
Trigger: GGTGGATTCAGCAGAAGGCAAGATGGTTATAATTCT...GTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CAA 90 bp AGCTCTCTGGCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATACCCAGAAAGAGTGCTaGCTATGCACCTGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: SSLAYRPMTSYQPAYTTDTQKEC*LCTCSS
Trigger: TGAACTACAGGTGCATAGCAAGCACTCTTTCTGGGT...ATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGCCAGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CAA 90 bp GTAATTCTTGTCTTTGCCACGTCTAGAGGGGTGGTGACTGCAGCGGCAAATCCAACCCAGAAAGAGTGCTaGCTATGCACCTGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: VILVFATSRGVVTAAANPTQKEC*LCTCSS
Trigger: TGAACTACAGGTGCATAGCAAGCACTCTTTCTGGGT...TGGATTTGCCGCTGCAGTCACCACCCCTCTAGACGTGGCAAAGACAAGAATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483224.5
ENST00000632740.1
CDS-3UTR CAA 90 bp CATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCTGTCTACCTCAGTTCTaGTCATACCAATCTCTACGG +
Preference number: 5 (lower is better)
Translates to: HTSQPIPRMAQSPCRYLSCLPQF*SYQSLR
Trigger: CCGTAGAGATTGGTATGACAAGAACTGAGGTAGACA...GCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp GAGGCTGCGAGGAAGCTTGGGTTCAAGCGTCACTCATCTGTACATAGTTGTAACGACTCTAACCCATCTTaGGCGCTGTCCTTCAGAACA +
Preference number: 5 (lower is better)
Translates to: EAARKLGFKRHSSVHSCNDSNPS*ALSFRT
Trigger: TGTTCTGAAGGACAGCGCCAAAGATGGGTTAGAGTC...GTTACAACTATGTACAGATGAGTGACGCTTGAACCCAAGCTTCCTCGCAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp TTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACCCTTATTCTGACATTTaGGAAGTGTTTTACACCCCC +
Preference number: 5 (lower is better)
Translates to: FSTGAYSSDSCSAEEGLHPYSDI*EVFYTP
Trigger: GGGGGTGTAAAACACTTCCAAAATGTCAGAATAAGG...GTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp GTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCCTTATTCTGACATTTaGGAAGTGTTTTACACCCCC +
Preference number: 5 (lower is better)
Translates to: VFSTGAYSSDSCSAEEGLPYSDI*EVFYTP
Trigger: GGGGGTGTAAAACACTTCCAAAATGTCAGAATAAGG...CAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp CCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGTGGAGGTGCAGATTTTaGGAGGTCCTTATTCTGACA +
Preference number: 5 (lower is better)
Translates to: PMTSYQPAYTTDGTISMPWRCRF*EVLILT
Trigger: TGTCAGAATAAGGACCTCCAAAAATCTGCACCTCCA...CGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp TCAGGCAGTCCAGAGCGCGCGGAAGCCCAGTACTTGCTTGTTTCCAATGGCCACGATTGTTGTAAGCCTTaGGTTTTCCAGAATTCTGAA +
Preference number: 5 (lower is better)
Translates to: SGSPERAEAQYLLVSNGHDCCKP*VFQNSE
Trigger: TTCAGAATTCTGGAAAACCAAAGGCTTACAACAATC...GTGGCCATTGGAAACAAGCAAGTACTGGGCTTCCGCGCGCTCTGGACTGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp TATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTTGCACTGCAGGCCCCTCTCTCTCAGCCCTTCATCCTaGTATTTATGGAAAGAGGTA +
Preference number: 5 (lower is better)
Translates to: YSSDSCSAEEGLHCRPLSLSPSS*YLWKEV
Trigger: TACCTCTTTCCATAAATACAAGGATGAAGGGCTGAG...AGAGAGGGGCCTGCAGTGCAAACCCTCTTCCGCTGAGCAGCTGTCTGAACTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CAA 90 bp GTTCTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCGAGGTTCTGAGGAAATaGTTCAGAGTACCGCCACAG +
Preference number: 5 (lower is better)
Translates to: VLRKLFRVPPQTPFSSLSEVLRK*FRVPPQ
Trigger: CTGTGGCGGTACTCTGAACAATTTCCTCAGAACCTC...GCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS-3UTR CAA 90 bp TCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCAGAATTATAACCATCTaGCCTTCTGCTGAATCCACC +
Preference number: 5 (lower is better)
Translates to: SEYRHRPRFLLLALWHTGRIITI*PSAEST
Trigger: GGTGGATTCAGCAGAAGGCAAGATGGTTATAATTCT...GCCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CAA 90 bp CCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTTCACATACTGTTTGTTaGCTCCAGGGCAGACAACAC +
Preference number: 5 (lower is better)
Translates to: PIPRMAQSPCRYLSTTGLSHTVC*LQGRQH
Trigger: GTGTTGTCTGCCCTGGAGCAAACAAACAGTATGTGA...AAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CAA 90 bp TTCAAGGACTCTTTCTGCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCATAAGTGGACTTTAGCAAGGTaGTATCACCCGGACTCCACA +
Preference number: 5 (lower is better)
Translates to: FKDSFCQLPTASCAFGHKWTLAR*YHPDST
Trigger: TGTGGAGTCCGGGTGATACAACCTTGCTAAAGTCCA...CTTATGACCGAACGCACAGCTTGCTGTTGGAAGTTGGCAGAAAGAGTCCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp ATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAATCCCCAGGAATGTATaGGACCTTTTCAAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: ILAQLVFSTGAYSSDSCSIPRNV*DLFKAH
Trigger: GTGGGCTTTGAAAAGGTCCAATACATTCCTGGGGAT...TGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp GCCAACTTCCAACAGCAAGCTGTGCGTTCGGTCATAAGCCCCCAGAAAGATGAATGGCAACTCTGGAAATaGGATATTCCCTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: ANFQQQAVRSVISPQKDEWQLWK*DIPFLL
Trigger: GAGGAGAAAGGGAATATCCAATTTCCAGAGTTGCCA...TTCATCTTTCTGGGGGCTTATGACCGAACGCACAGCTTGCTGTTGGAAGTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp TGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGGAAGAGGGTTGTTTCCTTGAGGTGTTaGAATATGCCTATAATTGCC +
Preference number: 5 (lower is better)
Translates to: WSSALGPIVQTAAQRKRVVSLRC*NMPIIA
Trigger: GGCAATTATAGGCATATTCAAACACCTCAAGGAAAC...AACCCTCTTCCGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp TTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTTCAGACAGCTGCTCAGCGCTCAGCCCTTCATCCTaGTATTTATGGAAAGAGGTA +
Preference number: 5 (lower is better)
Translates to: LAQLVFSTGAYSSDSCSALSPSS*YLWKEV
Trigger: TACCTCTTTCCATAAATACAAGGATGAAGGGCTGAG...CGCTGAGCAGCTGTCTGAACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CAA 90 bp CTACACCTGGAGCTTGTTAGTCAAGGTCTAAAATCCCTAAGTGTGGTGACCTTTAGCCTTACTAAATCCTaGGGGACTCTGCAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LHLELVSQGLKSLSVVTFSLTKS*GTLQPG
Trigger: ACCAGGCTGCAGAGTCCCCAAGGATTTAGTAAGGCT...AAAGGTCACCACACTTAGGGATTTTAGACCTTGACTAACAAGCTCCAGGTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354883.11
ENST00000633701.1
CDS-3UTR CAA 90 bp TACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCAGAATTATAACCATCTaGCCTTCTGCTGAATCCACC +
Preference number: 5 (lower is better)
Translates to: YHGWHNLHAGILAQLVFSRIITI*PSAEST
Trigger: GGTGGATTCAGCAGAAGGCAAGATGGTTATAATTCT...GCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CAA 90 bp ATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGTGGAGGTGCAGATTTTaGGAGGTCCTTATTCTGACA +
Preference number: 5 (lower is better)
Translates to: IPRMAQSPCRYLSTTGLQWRCRF*EVLILT
Trigger: TGTCAGAATAAGGACCTCCAAAAATCTGCACCTCCA...CTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp CGGGTCGTATGCAGTGACTGCAACACCGAAGTGGACTGTTACTCCAGGGGACAACTGAAAAAGTTGCTTTaGACCATTTTTCCAGGTGTT +
Preference number: 5 (lower is better)
Translates to: RVVCSDCNTEVDCYSRGQLKKLL*TIFPGV
Trigger: AACACCTGGAAAAATGGTCAAAAGCAACTTTTTCAG...TTGTCCCCTGGAGTAACAGTCCACTTCGGTGTTGCAGTCACTGCATACGACCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp GTTGTAGTCATGTGCCCTGGGGCTAGGGCTTCTCCTGCTCGGCAAACTAGATCAGATGTTGCTATTTGCTaGAATCAACAATCCATGGAT +
Preference number: 5 (lower is better)
Translates to: VVVMCPGARASPARQTRSDVAIC*NQQSMD
Trigger: ATCCATGGATTGTTGATTCAAGCAAATAGCAACATC...TGATCTAGTTTGCCGAGCAGGAGAAGCCCTAGCCCCAGGGCACATGACTACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp AGCCAGCCTATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGGAAGAATGGGGCTTaGGATAAGTTAAAATACCAC +
Preference number: 5 (lower is better)
Translates to: SQPIPRMAQSPCRYLSTTGKNGA*DKLKYH
Trigger: GTGGTATTTTAACTTATCCAAAGCCCCATTCTTCCC...AGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTATAGGCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp GCATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCCAGGATTTGCTGCTGTaGCTGTTTATTGTTACAGCT +
Preference number: 5 (lower is better)
Translates to: AYRPMTSYQPAYTTDGTIQDLLL*LFIVTA
Trigger: AGCTGTAACAATAAACAGCAACAGCAGCAAATCCTG...GATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp CCCGGACTCCACAGAGCTACAGCCTGCATCTTCATTAACTTCAGGCAGTCCAGACTGAGATGTTGCTATTaGCTTGAATCAACAATCCAT +
Preference number: 5 (lower is better)
Translates to: PGLHRATACIFINFRQSRLRCCY*LESTIH
Trigger: ATGGATTGTTGATTCAAGCAAATAGCAACATCTCAG...TCTGGACTGCCTGAAGTTAATGAAGATGCAGGCTGTAGCTCTGTGGAGTCCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp CTCACACACCACAGGGGGCGCTGGACACATCTCTGTAAAATAATACAATTGTGCAGAATTATAACCATCTaGCCTTCTGCTGAATCCACC +
Preference number: 5 (lower is better)
Translates to: LTHHRGRWTHLCKIIQLCRIITI*PSAEST
Trigger: GGTGGATTCAGCAGAAGGCAAGATGGTTATAATTCT...GCACAATTGTATTATTTTACAGAGATGTGTCCAGCGCCCCCTGTGGTGTGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CAA 90 bp TTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCTCTCTGGCATACAGGCTGAAAAAGTTGCTTTaGACCATTTTTCCAGGTGTT +
Preference number: 5 (lower is better)
Translates to: FRVPPQTPFSSLSSLAYRLKKLL*TIFPGV
Trigger: AACACCTGGAAAAATGGTCAAAAGCAACTTTTTCAG...CCTGTATGCCAGAGAGCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp GTAATTCTTGTCTTTGCCACGTCTAGAGGGGTGGTGACTGCAGCGGCAAATCCAGATTGTTGTAAGCCTTaGGTTTTCCAGAATTCTGAA +
Preference number: 5 (lower is better)
Translates to: VILVFATSRGVVTAAANPDCCKP*VFQNSE
Trigger: TTCAGAATTCTGGAAAACCAAAGGCTTACAACAATC...TGGATTTGCCGCTGCAGTCACCACCCCTCTAGACGTGGCAAAGACAAGAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp GTTCTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCGGGAAGAATGGGGCTTaGGATAAGTTAAAATACCAC +
Preference number: 5 (lower is better)
Translates to: VLRKLFRVPPQTPFSSLSGKNGA*DKLKYH
Trigger: GTGGTATTTTAACTTATCCAAAGCCCCATTCTTCCC...GCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp TCCTTTACCGACGGCTTGTGTGTTTGTGTTGGGGTGTGCCATCACTTCCTATTTCAGGATTTGCTGCTGTaGCTGTTTATTGTTACAGCT +
Preference number: 5 (lower is better)
Translates to: SFTDGLCVCVGVCHHFLFQDLLL*LFIVTA
Trigger: AGCTGTAACAATAAACAGCAACAGCAGCAAATCCTG...AAATAGGAAGTGATGGCACACCCCAACACAAACACACAAGCCGTCGGTAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp AATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGCACTGGGGCCTATAGTGTTTCCTTGAGGTGTTaGAATATGCCTATAATTGCC +
Preference number: 5 (lower is better)
Translates to: NLHAGILAQLVFSTGAYSVSLRC*NMPIIA
Trigger: GGCAATTATAGGCATATTCAAACACCTCAAGGAAAC...ACTATAGGCCCCAGTGCTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS-3UTR CAA 90 bp AAGCAAAATCACATACTGTTTGTTTGCTCCAGGGCAGACAACACTGCTAGATTCTCACATACTGTTTGTTaGCTCCAGGGCAGACAACAC +
Preference number: 5 (lower is better)
Translates to: KQNHILFVCSRADNTARFSHTVC*LQGRQH
Trigger: GTGTTGTCTGCCCTGGAGCAAACAAACAGTATGTGA...GAATCTAGCAGTGTTGTCTGCCCTGGAGCAAACAAACAGTATGTGATTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354883.11
ENST00000483224.5
ENST00000632740.1
ENST00000633701.1
CDS-3UTR CAA 90 bp ATACCACGGATGGCACAATCTCCATGCCGGTATCTTAGCACAACTGGTCTTCAGGAAGATGCATTTTCTTaGCGTCTTTTCATGATCTGT +
Preference number: 5 (lower is better)
Translates to: IPRMAQSPCRYLSTTGLQEDAFS*RLFMIC
Trigger: ACAGATCATGAAAAGACGCAAAGAAAATGCATCTTC...CTGAAGACCAGTTGTGCTAAGATACCGGCATGGAGATTGTGCCATCCGTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CAA 90 bp ATACAGGCCAATGACTTCATACCAGCCAGCCTATACCACGGATGGCACAATCTCGAAGATGCATTTTCTTaGCGTCTTTTCATGATCTGT +
Preference number: 5 (lower is better)
Translates to: IQANDFIPASLYHGWHNLEDAFS*RLFMIC
Trigger: ACAGATCATGAAAAGACGCAAAGAAAATGCATCTTC...GAGATTGTGCCATCCGTGGTATAGGCTGGCTGGTATGAAGTCATTGGCCTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CAA 90 bp GTTCTGAGGAAATTGTTCAGAGTACCGCCACAGACCCCGTTTTCTTCTCTTAGCCTGAGATGTTGCTATTaGCTTGAATCAACAATCCAT +
Preference number: 5 (lower is better)
Translates to: VLRKLFRVPPQTPFSSLSLRCCY*LESTIH
Trigger: ATGGATTGTTGATTCAAGCAAATAGCAACATCTCAG...GCTAAGAGAAGAAAACGGGGTCTGTGGCGGTACTCTGAACAATTTCCTCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS GCA 90 bp CTTGCTTTCTCAGATCCCGCTACCATTTCTCAATATAATTCTAACTaGCATCATCTCAGCCCTTCATCCTTGTATTTATGGAAAGAGGTA +
Preference number: 5 (lower is better)
Translates to: LAFSDPATISQYNSN*HHLSPSSLYLWKEV
Trigger: TACCTCTTTCCATAAATACAAGGATGAAGGGCTGAGATGATGGCAGTTAGAATTATATTGAGAAATGGTAGCGGGATCTGAGAAAGCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS-3UTR CAA 90 bp ACCAAAAAGCTAGGTTTTGTCTACCTCAGTTCTTGTCATACCAATCTCTACGGGGATGTTGCTATTTGCTaGAATCAACAATCCATGGAT +
Preference number: 5 (lower is better)
Translates to: TKKLGFVYLSSCHTNLYGDVAIC*NQQSMD
Trigger: ATCCATGGATTGTTGATTCAAGCAAATAGCAACATC...CCCGTAGAGATTGGTATGACAAGAACTGAGGTAGACAAAACCTAGCTTTTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464350.6
ENST00000634032.1
CDS CCA 72 bp GCAGCACCAGCGCTGCCACGAACCCCGGCCGGTCCATaGTCGCTCAGACCTCGTCAAGGCTACAATCCAAGC +
Preference number: 6 (lower is better)
Translates to: AAPALPRTPAGP*SLRPRQGYNPS
Trigger: GCTTGGATTGTAGCCTTGACGAGGTCTGAGCGACCATGGACCGGCCGGGGTTCGTGGCAGCGCTGGTGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336733.10
ENST00000632575.1
CDS CCA 72 bp CAGCCACCAGCGCTGCCACGAACCCCGGCCGGTCCATaGTCGCTCAGACCTCGTCAAGGCTACAATCCAAGC +
Preference number: 6 (lower is better)
Translates to: QPPALPRTPAGP*SLRPRQGYNPS
Trigger: GCTTGGATTGTAGCCTTGACGAGGTCTGAGCGACCATGGACCGGCCGGGGTTCGTGGCAGCGCTGGTGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354883.11
ENST00000633701.1
ENST00000676754.1
CDS CCA 72 bp CAAGCCGGAGCAGAAGCGGATCACGTCCTCGCGCGCTaGGCGCCGCCATGTTTGAGGCGGGTCTGTCTTGAA +
Preference number: 6 (lower is better)
Translates to: QAGAEADHVLAR*APPCLRRVCLE
Trigger: TTCAAGACAGACCCGCCTCAAACATGGCGGCGCCCAGCGCGCGAGGACGTGATCCGCTTCTGCTCCGGCTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS GCA 72 bp GTGATCCAACTCGGCATCAGGATGAGGAGGTGGCACTaGCAGCTGAGACGCCCGAAGTCCAGGCAGCTGCCG +
Preference number: 6 (lower is better)
Translates to: VIQLGIRMRRWH*QLRRPKSRQLP
Trigger: CGGCAGCTGCCTGGACTTCGGGCGTCTCAGCTGGCAGTGCCACCTCCTCATCCTGATGCCGAGTTGGATCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS CAA 90 bp GGAGCAGAAGCGGATCACGTCCTCGCGCGCTGGGCGCCGCCATGTTaGAGGCGGGTCTGTCTTGAACTTCCGGGACCACGTGACGTAGAA +
Preference number: 6 (lower is better)
Translates to: GAEADHVLARWAPPC*RRVCLELPGPRDVE
Trigger: TTCTACGTCACGTGGTCCCGGAAGTTCAAGACAGACCCGCCTCAAACATGGCGGCGCCCAGCGCGCGAGGACGTGATCCGCTTCTGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS CAA 90 bp TCCAGGCAGCTGCCGACCGACCCTCTGCAAAGGGAGGCCACTGCTTaGCTCTTGCAAGAAAATCCCTGGTATATGGTCCCCTGCCAGCCC +
Preference number: 6 (lower is better)
Translates to: SRQLPTDPLQREATA*LLQENPWYMVPCQP
Trigger: GGGCTGGCAGGGGACCATATACCAGGGATTTTCTTGCAAGAGCAAAGCAGTGGCCTCCCTTTGCAGAGGGTCGGTCGGCAGCTGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS CAA 72 bp CTGCCGACCGACCCTCTGCAAAGGGAGGCCACTGCTTaGCTCTTGCAAGAAAATCCCTGGTATATGGTCCCC +
Preference number: 6 (lower is better)
Translates to: LPTDPLQREATA*LLQENPWYMVP
Trigger: GGGGACCATATACCAGGGATTTTCTTGCAAGAGCAAAGCAGTGGCCTCCCTTTGCAGAGGGTCGGTCGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS TCA 72 bp TCCGTGGCCGAGATCCAGGAGAGAGCAGCGGTAGAATaGGGCCGGCGTGATTCTGAACTGCAATGTGAAGAT +
Preference number: 6 (lower is better)
Translates to: SVAEIQERAAVE*GRRDSELQCED
Trigger: ATCTTCACATTGCAGTTCAGAATCACGCCGGCCTCATTCTACCGCTGCTCTCTCCTGGATCTCGGCCACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS GCA 72 bp GCAGCTGCCGACCGACCCTCTGCAAAGGGAGGCCACTaGTTTGCTCTTGCAAGAAAATCCCTGGTATATGGT +
Preference number: 6 (lower is better)
Translates to: AAADRPSAKGGH*FALARKSLVYG
Trigger: ACCATATACCAGGGATTTTCTTGCAAGAGCAAAGCAGTGGCCTCCCTTTGCAGAGGGTCGGTCGGCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413054.5
ENST00000633238.1
CDS CAA 72 bp TCGGCAAATCCCTTACCTCGGTTTCCTGCAGCAGCGTaGTGTGCAGCTAGACGGAGGAACTTTCGCGAGCAA +
Preference number: 6 (lower is better)
Translates to: SANPLPRFPAAA*CAARRRNFREQ
Trigger: TTGCTCGCGAAAGTTCCTCCGTCTAGCTGCACACAACGCTGCTGCAGGAAACCGAGGTAAGGGATTTGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS GCA 72 bp AACTTCATCAGGGCTCCACTCGAACCGCCTTCTCTCTaGTTTCAACTCATGGCCTTGCTTTCTCAGATCCCG +
Preference number: 6 (lower is better)
Translates to: NFIRAPLEPPSL*FQLMALLSQIP
Trigger: CGGGATCTGAGAAAGCAAGGCCATGAGTTGAAAGCAGAGAGAAGGCGGTTCGAGTGGAGCCCTGATGAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS CCA 72 bp AGCAGATACCTGTGCCCTCTGCTTAACCACTTCAGATaGAACTCGAATCAGGCAGGCAACCACTTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SRYLCPLLNHFR*NSNQAGNHFSS
Trigger: GCTGGAGAAGTGGTTGCCTGCCTGATTCGAGTTCCATCTGAAGTGGTTAAGCAGAGGGCACAGGTATCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336733.10
ENST00000354883.11
ENST00000413054.5
ENST00000464350.6
ENST00000483224.5
ENST00000632575.1
ENST00000632740.1
ENST00000633238.1
ENST00000633701.1
ENST00000634032.1
ENST00000676754.1
CDS CCA 72 bp AGCAGATACCTGTGCCCTCTGCTTAACCACTTCAGATaGAACTCGAATCAGGCAGGCAACATCCGTAGAGGC +
Preference number: 6 (lower is better)
Translates to: SRYLCPLLNHFR*NSNQAGNIRRG
Trigger: GCCTCTACGGATGTTGCCTGCCTGATTCGAGTTCCATCTGAAGTGGTTAAGCAGAGGGCACAGGTATCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484768.1
ENST00000633644.1
CDS CAA 90 bp AGGGCTCCACTCGAACCGCCTTCTCTCTGCTTTCAACTCATGGCCTaGCTTTCTCAGATCCCGCTACCATTTCTCAATATAATTCTAACT +
Preference number: 6 (lower is better)
Translates to: RAPLEPPSLCFQLMA*LSQIPLPFLNIILT
Trigger: AGTTAGAATTATATTGAGAAATGGTAGCGGGATCTGAGAAAGCAAGGCCATGAGTTGAAAGCAGAGAGAAGGCGGTTCGAGTGGAGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS CAA 72 bp CTCGAACCGCCTTCTCTCTGCTTTCAACTCATGGCCTaGCTTTCTCAGATCCCGCTACCATTTCTCAATATA +
Preference number: 6 (lower is better)
Translates to: LEPPSLCFQLMA*LSQIPLPFLNI
Trigger: TATATTGAGAAATGGTAGCGGGATCTGAGAAAGCAAGGCCATGAGTTGAAAGCAGAGAGAAGGCGGTTCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1
CDS GCA 72 bp TCAGATCCCGCTACCATTTCTCAATATAATTCTAACTaGCATCATCTCAGCCCTTCATCCTTGTATTTATGG +
Preference number: 6 (lower is better)
Translates to: SDPATISQYNSN*HHLSPSSLYLW
Trigger: CCATAAATACAAGGATGAAGGGCTGAGATGATGGCAGTTAGAATTATATTGAGAAATGGTAGCGGGATCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633701.1
ENST00000676754.1