RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC25A25 (Homo sapiens)

Ensembl gene IDs: ENSG00000148339

Ensembl transcript IDs: ENST00000373064.9, ENST00000373066.9, ENST00000373068.6, ENST00000373069.10, ENST00000373069.9, ENST00000432073.6, ENST00000445012.2, ENST00000466983.1, ENST00000472769.5, ENST00000682371.1, ENST00000682638.1, ENST00000683206.1, ENST00000684304.1

Found 760 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTGCAGCCAGGCCAGGCAGCCCGAGCCCCCTGCACTCCCAAGCATaGCCGAGAGCCCCAGCCATCAGCAGGGCTCAGATGCCAGTGACC +
Preference number: 1 (lower is better)
Translates to: CAARPGSPSPLHSQA*PRAPAISRAQMPVT
Trigger: GGTCACTGGCATCTGAGCCCTGCTGATGGCTGGGGCTCTCGGGCATGCTTGGGAGTGCAGGGGGCTCGGGCTGCCTGGCCTGGCTGCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR GCA 90 bp CTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTTaGCTTCTGTGCAGCCAGGCCAGGCAGCCCGAGCCCCCTGCACTC +
Preference number: 1 (lower is better)
Translates to: LTGSRPAQSTMSPST*LLCSQARQPEPPAL
Trigger: GAGTGCAGGGGGCTCGGGCTGCCTGGCCTGGCTGCACAGAAGGCAAGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR GCA 90 bp ACCTTACCTCAGCAGACAGGCAGGCAGCAAGAGGGCACAGGGAGATaGACGGCAGACCAGAGGGCAGGGGCCGTGGCCAACAGCTGGCTG +
Preference number: 1 (lower is better)
Translates to: TLPQQTGRQQEGTGR*TADQRAGAVANSWL
Trigger: CAGCCAGCTGTTGGCCACGGCCCCTGCCCTCTGGTCTGCCGTGCATCTCCCTGTGCCCTCTTGCTGCCTGCCTGTCTGCTGAGGTAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR GCA 90 bp GATGCACGGCAGACCAGAGGGCAGGGGCCGTGGCCAACAGCTGGCTaGAAGGGTGAAATGGAAGAACTAAGCCGGCCTCCAGGCTCCAAG +
Preference number: 1 (lower is better)
Translates to: DARQTRGQGPWPTAG*KGEMEELSRPPGSK
Trigger: CTTGGAGCCTGGAGGCCGGCTTAGTTCTTCCATTTCACCCTTGCAGCCAGCTGTTGGCCACGGCCCCTGCCCTCTGGTCTGCCGTGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR TCA 90 bp GCAGACCAGAGGGCAGGGGCCGTGGCCAACAGCTGGCTGCAAGGGTaGAATGGAAGAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTAT +
Preference number: 1 (lower is better)
Translates to: ADQRAGAVANSWLQG*NGRTKPASRLQARY
Trigger: ATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTCTTCCATTTCACCCTTGCAGCCAGCTGTTGGCCACGGCCCCTGCCCTCTGGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR TCA 90 bp CCTGCTGGGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTaGGCAGTCAGCCAAGCTCCTGCTCCCTCGTCTTCCTCTGGAAGC +
Preference number: 1 (lower is better)
Translates to: PAGVGQEPPGRQNRL*AVSQAPAPSSSSGS
Trigger: GCTTCCAGAGGAAGACGAGGGAGCAGGAGCTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCCCAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR CCA 90 bp GTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATaGGATTGGACGAGGGGGTGGGATGTGGGCTGTAGCCCTCCTCCC +
Preference number: 1 (lower is better)
Translates to: VRPGRPRDLTFHHGL*DWTRGWDVGCSPPP
Trigger: GGGAGGAGGGCTACAGCCCACATCCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR CCA 90 bp CAGGTCATTCTGGTGGAATGGAAGTGCAACCGTGAGGTCGCCAGTTaGCCGGCATTGTTAAGCAAGGGCAGCAGAAGGCTGGGAGGGACG +
Preference number: 1 (lower is better)
Translates to: QVILVEWKCNREVAS*PALLSKGSRRLGGT
Trigger: CGTCCCTCCCAGCCTTCTGCTGCCCTTGCTTAACAATGCCGGCCAACTGGCGACCTCACGGTTGCACTTCCATTCCACCAGAATGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR TCA 90 bp TCACAGCTTGGCTCGAGACAGCTTAGTGTTGGCACATTCACAGAATaGGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTC +
Preference number: 1 (lower is better)
Translates to: SQLGSRQLSVGTFTE*DGCTPQAAAQDQRV
Trigger: GACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACACTAAGCTGTCTCGAGCCAAGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
ENST00000466983.1
3UTR GCA 90 bp ACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGCTCCTaGTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTC +
Preference number: 1 (lower is better)
Translates to: TPRASEQTLSSQPSS*SLVFLWKHRSRSFV
Trigger: GACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAGCAGGAGCTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR TCA 90 bp TCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTaGGCCCGGAGCCTGCTGACCCTGGACCCTAAGGAATGCCTGTGG +
Preference number: 1 (lower is better)
Translates to: SLLAGTAENVLSLHM*ARSLLTLDPKECLW
Trigger: CCACAGGCATTCCTTAGGGTCCAGGGTCAGCAGGCTCCGGGCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR TCA 90 bp TGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCACGTaGCCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTG +
Preference number: 1 (lower is better)
Translates to: WRQCCRLGSQAWEAT*PHLSSWIMGLDEGV
Trigger: CACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR CCA 90 bp CGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTaGGATGTGGGCTGTAGCCCTCCTCCCACCTTACCTCAGCAGACA +
Preference number: 1 (lower is better)
Translates to: RDLTFHHGLWDWTRG*DVGCSPPPTLPQQT
Trigger: TGTCTGCTGAGGTAAGGTGGGAGGAGGGCTACAGCCCACATCCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR CCA 90 bp AGTGACCACAAGGCCAGATCCTTTCCTCTTCCTTCACAGCCAAGTTaGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCACG +
Preference number: 1 (lower is better)
Translates to: SDHKARSFPLPSQPS*RQCCRLGSQAWEAT
Trigger: CGTGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTGAAGGAAGAGGAAAGGATCTGGCCTTGTGGTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR GCA 90 bp TGCCAAAGGAAAGGAGCCAGGGCTGCTGCCTTCTGGCCGCTTTTCTaGCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCA +
Preference number: 1 (lower is better)
Translates to: CQRKGARAAAFWPLF*LQSQKEFLWTDVTA
Trigger: TGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCAGAAAAGCGGCCAGAAGGCAGCAGCCCTGGCTCCTTTCCTTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR TCA 90 bp ACCCTCGCAGCGCAGGAAATAACTGGATTCCACCTTCAAGGTTATTaGGGTTCCTCCCTCTCTCTCCACGCCCCCAGTCAAACCCTGAAA +
Preference number: 1 (lower is better)
Translates to: TLAAQEITGFHLQGY*GSSLSLHAPSQTLK
Trigger: TTTCAGGGTTTGACTGGGGGCGTGGAGAGAGAGGGAGGAACCTCAATAACCTTGAAGGTGGAATCCAGTTATTTCCTGCGCTGCGAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR TCA 90 bp GCCCCCGCCCACCACAAATTCACAGTGAGAGGCACCTCACTGCCTTaGCATTCAGAAAAGAGTGAAATAAAGAAACCCTCGCAGCGCAGG +
Preference number: 1 (lower is better)
Translates to: APAHHKFTVRGTSLP*HSEKSEIKKPSQRR
Trigger: CCTGCGCTGCGAGGGTTTCTTTATTTCACTCTTTTCTGAATGTCAAGGCAGTGAGGTGCCTCTCACTGTGAATTTGTGGTGGGCGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR TCA 90 bp AAGATTTCCTCATCAGGTCATTCTGGTGGAATGGAAGTGCAACCGTaGGGTCGCCAGTTGGCCGGCATTGTTAAGCAAGGGCAGCAGAAG +
Preference number: 1 (lower is better)
Translates to: KISSSGHSGGMEVQP*GRQLAGIVKQGQQK
Trigger: CTTCTGCTGCCCTTGCTTAACAATGCCGGCCAACTGGCGACCTCACGGTTGCACTTCCATTCCACCAGAATGACCTGATGAGGAAATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR GCA 90 bp TCTGCCTGCTGTTCAGATATCTTGACTCCCAAGTCCCGCAGGGACTaGATGATCTCCTGCGCGTCAATGCGTCCATCATTCTTTTTGTCC +
Preference number: 1 (lower is better)
Translates to: SACCSDILTPKSRRD*MISCASMRPSFFLS
Trigger: GGACAAAAAGAATGATGGACGCATTGACGCGCAGGAGATCATGCAGTCCCTGCGGGACTTGGGAGTCAAGATATCTGAACAGCAGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472769.5
3UTR CCA 90 bp TCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTTCTaGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCTCCAAC +
Preference number: 1 (lower is better)
Translates to: SSGSTEVAHLSGLSF*TKPFSQQSIIKASN
Trigger: GTTGGAGGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTAGAGGGCAGGGGCCGTaGCCAACAGCTGGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTRGQGP*PTAGCK
Trigger: CTTGCAGCCAGCTGTTGGCCACGGCCCCTGCCCTCT...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGGACAAGCCCTGGGCCTaGCAGCTCTCCCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLDKPWA*QLSPPS
Trigger: GGAGGGTGGGGAGAGCTGGCAGGCCCAGGGCTTGTC...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTGATTGGACGAGGGGGTaGGATGTGGGCTGTAGCCCT +
Preference number: 2 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTDWTRG*DVGCSP
Trigger: AGGGCTACAGCCCACATCCCACCCCCTCGTCCAATC...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGCTGCACACCCCAGGCTaGGGCCCAGGATCAGCGAGT +
Preference number: 2 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKLHTPG*GPGSAS
Trigger: ACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAG...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGAACAGGAGGGTCTGCTaGGGTCAGCAGGACAAGCCC +
Preference number: 2 (lower is better)
Translates to: ALPTLPAGASRVFTAWLENRRVC*GQQDKP
Trigger: GGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTT...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
ENST00000466983.1
3UTR CAA 90 bp AGCCCCCTGTACAGCCCGAAGGCCCCCTCGGTCCGCAGGATATGTTaGAAGAGGCTGCTCATGGTCACCTCCGGAGCGCCCTCAATAGAG +
Preference number: 2 (lower is better)
Translates to: SPLYSPKAPSVRRIC*KRLLMVTSGAPSIE
Trigger: CTCTATTGAGGGCGCTCCGGAGGTGACCATGAGCAGCCTCTTCAAACATATCCTGCGGACCGAGGGGGCCTTCGGGCTGTACAGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000466983.1
3UTR-3UTR GCA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTCTGCACACCCCAGGCTaGGGCCCAGGATCAGCGAGT +
Preference number: 2 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSLHTPG*GPGSAS
Trigger: ACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAG...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
ENST00000466983.1
3UTR-3UTR GCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGGACAAGCCCTGGGCCTaGCAGCTCTCCCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGDKPWA*QLSPPS
Trigger: GGAGGGTGGGGAGAGCTGGCAGGCCCAGGGCTTGTC...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACCAACAGGAGGGTCTaGTGGGGTCAGCAGGACAAG +
Preference number: 2 (lower is better)
Translates to: ALPTLPAGASRVFTAWLETNRRV*WGQQDK
Trigger: CTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGT...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
ENST00000466983.1
3UTR-3UTR CCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACAAGAGGGCAGGGGCCGTaGCCAACAGCTGGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATRGQGP*PTAGCK
Trigger: CTTGCAGCCAGCTGTTGGCCACGGCCCCTGCCCTCT...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCAAGAGGGCAGGGGCCGTaGCCAACAGCTGGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPRGQGP*PTAGCK
Trigger: CTTGCAGCCAGCTGTTGGCCACGGCCCCTGCCCTCT...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACACGAGGGGGTGGGATGTaGGCTGTAGCCCTCCTCCCA +
Preference number: 2 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATRGGGM*AVALLP
Trigger: TGGGAGGAGGGCTACAGCCCACATCCCACCCCCTCG...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR CAA 90 bp CTGGTGGAATGGAAGTGCAACCGTGAGGTCGCCAGTTGGCCGGCATaGTTAAGCAAGGGCAGCAGAAGGCTGGGAGGGACGGAGCCAGTC +
Preference number: 2 (lower is better)
Translates to: LVEWKCNREVASWPA*LSKGSRRLGGTEPV
Trigger: GACTGGCTCCGTCCCTCCCAGCCTTCTGCTGCCCTTGCTTAACAATGCCGGCCAACTGGCGACCTCACGGTTGCACTTCCATTCCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR TCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGGGCACATTCACAGAATaGGATGGCTGCACACCCCAG +
Preference number: 2 (lower is better)
Translates to: ALPTLPAGASRVFTAWLEGTFTE*DGCTPQ
Trigger: CTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCC...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
ENST00000466983.1
3UTR-3UTR GCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAACTGCACACCCCAGGCTaGGGCCCAGGATCAGCGAGT +
Preference number: 2 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKLHTPG*GPGSAS
Trigger: ACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAG...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCACTGCACACCCCAGGCTaGGGCCCAGGATCAGCGAGT +
Preference number: 2 (lower is better)
Translates to: EHTNALPFALKHGAPLPSLHTPG*GPGSAS
Trigger: ACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAG...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp CCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGACAAGCCCTGGGCCTaGCAGCTCTCCCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: PGRPRDLTFHHGLWDWTRDKPWA*QLSPPS
Trigger: GGAGGGTGGGGAGAGCTGGCAGGCCCAGGGCTTGTC...CCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCAGCCCGAGCCCCCTaGACTCCCAAGCATGCCCGA +
Preference number: 2 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHAARAP*TPKHAR
Trigger: TCGGGCATGCTTGGGAGTGCAGGGGGCTCGGGCTGC...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTATTCACAGAATGAGATaGCTGCACACCCCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTIHRMR*LHTPGC
Trigger: GCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAAT...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCACAGCAGGACAAGCCCTaGGCCTGCCAGCTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: EHTNALPFALKHGAPLPSQQDKP*ACQLSP
Trigger: TGGGGAGAGCTGGCAGGCCCAGGGCTTGTCCTGCTG...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR TCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAGAGCCCGGAGCCTGCTaGCCCTGGACCCTAAGGAAT +
Preference number: 2 (lower is better)
Translates to: EHTNALPFALKHGAPLPSEPGAC*PWTLRN
Trigger: ATTCCTTAGGGTCCAGGGTCAGCAGGCTCCGGGCTC...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR TCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAAGAGCCCGGAGCCTGCTaGCCCTGGACCCTAAGGAAT +
Preference number: 2 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKEPGAC*PWTLRN
Trigger: ATTCCTTAGGGTCCAGGGTCAGCAGGCTCCGGGCTC...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCACCAACAGGAGGGTCTaGTGGGGTCAGCAGGACAAG +
Preference number: 2 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISTNRRV*WGQQDK
Trigger: CTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGT...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
ENST00000466983.1
3UTR-3UTR GCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGCTGGACCCTAAGGAATaGCTGTGGTCTTCGCTGGAA +
Preference number: 2 (lower is better)
Translates to: ALPTLPAGASRVFTAWLELDPKE*LWSSLE
Trigger: TTCCAGCGAAGACCACAGGCATTCCTTAGGGTCCAG...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTTGGCCAACAGCTGGCTaGAAGGGTGAAATGGAAGAA +
Preference number: 2 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTWPTAG*KGEMEE
Trigger: TTCTTCCATTTCACCCTTGCAGCCAGCTGTTGGCCA...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTCCAAGTTGGCGTCAATaGTGTAGGTTGGGAAGTCAG +
Preference number: 2 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTPSWRQ*CRLGSQ
Trigger: CTGACTTCCCAACCTACAGCATTGACGCCAACTTGG...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACAATGAGCCCCAGCACTTaGCTTCTGTGCAGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATMSPST*LLCSQA
Trigger: GGCCTGGCTGCACAGAAGGCAAGTGCTGGGGCTCAT...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR TCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGGGCACATTCACAGAATaGGATGGCTGCACACCCCAG +
Preference number: 2 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKGTFTE*DGCTPQ
Trigger: CTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCC...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR TCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGCTGTCCTTACACATGTaGGCCCGGAGCCTGCTGACC +
Preference number: 2 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGLSLHM*ARSLLT
Trigger: GGTCAGCAGGCTCCGGGCTCACATGTGTAAGGACAG...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGAACAGGAGGGTCTGCTaGGGTCAGCAGGACAAGCCC +
Preference number: 2 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGNRRVC*GQQDKP
Trigger: GGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTT...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAGATTGGACGAGGGGGTaGGATGTGGGCTGTAGCCCT +
Preference number: 2 (lower is better)
Translates to: EHTNALPFALKHGAPLPSDWTRG*DVGCSP
Trigger: AGGGCTACAGCCCACATCCCACCCCCTCGTCCAATC...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGGTCAATGCTGTAGGTTaGGAAGTCAGGCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKVNAVG*EVRPGR
Trigger: CCTCCCAGGCCTGACTTCCCAACCTACAGCATTGAC...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR TCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAGAGCCCGGAGCCTGCTaGCCCTGGACCCTAAGGAAT +
Preference number: 2 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQEPGAC*PWTLRN
Trigger: ATTCCTTAGGGTCCAGGGTCAGCAGGCTCCGGGCTC...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR TCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCTGGGAGGCCACGTaGCCTCACCTTTCATCATGG +
Preference number: 2 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHAWEAT*PHLSSW
Trigger: CCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGC...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTCTGCACACCCCAGGCTaGGGCCCAGGATCAGCGAGT +
Preference number: 2 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGILHTPG*GPGSAS
Trigger: ACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAG...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGGACAAGCCCTGGGCCTaGCAGCTCTCCCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQDKPWA*QLSPPS
Trigger: GGAGGGTGGGGAGAGCTGGCAGGCCCAGGGCTTGTC...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTATGAGCCCCAGCACTTaGCTTCTGTGCAGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: LPRLPLEAQKSLICPACPMSPST*LLCSQA
Trigger: GGCCTGGCTGCACAGAAGGCAAGTGCTGGGGCTCAT...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCATTCACAGAATGAGATaGCTGCACACCCCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISIHRMR*LHTPGC
Trigger: GCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAAT...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
ENST00000466983.1
3UTR-3UTR CCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGATTGGACGAGGGGGTaGGATGTGGGCTGTAGCCCT +
Preference number: 2 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHDWTRG*DVGCSP
Trigger: AGGGCTACAGCCCACATCCCACCCCCTCGTCCAATC...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAGACACAAGTGGAATGTaGGGCTGGTCCCGCTGCGCC +
Preference number: 2 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQDTSGM*GWSRCA
Trigger: GGCGCAGCGGGACCAGCCCCACATTCCACTTGTGTC...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR TCA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCAAGCTGGCTGCAAGGGTaGAATGGAAGAACTAAGCCG +
Preference number: 2 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPSWLQG*NGRTKP
Trigger: CGGCTTAGTTCTTCCATTTCACCCTTGCAGCCAGCT...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR TCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAGCCTGGGAGGCCACGTaGCCTCACCTTTCATCATGG +
Preference number: 2 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQAWEAT*PHLSSW
Trigger: CCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGC...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR TCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTGGGCTCAGATGCCAGTaGCCACAAGGCCAGATCCTT +
Preference number: 2 (lower is better)
Translates to: LPRLPLEAQKSLICPACPGLRCQ*PQGQIL
Trigger: AAGGATCTGGCCTTGTGGTCACTGGCATCTGAGCCC...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATACCAACAGGAGGGTCTaGTGGGGTCAGCAGGACAAG +
Preference number: 2 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHTNRRV*WGQQDK
Trigger: CTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGT...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp GTTTTCCACGGGGTGGAGGAGGTGGTAGTCTCTCCACTCGTTCCAGTCAATGGTAAGTCCCGCAGGGACTaGATGATCTCCTGCGCGTCA +
Preference number: 2 (lower is better)
Translates to: VFHGVEEVVVSPLVPVNGKSRRD*MISCAS
Trigger: TGACGCGCAGGAGATCATGCAGTCCCTGCGGGACTT...ACCATTGACTGGAACGAGTGGAGAGACTACCACCTCCTCCACCCCGTGGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472769.5
3UTR-3UTR CCA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTATTCACAGAATGAGATaGCTGCACACCCCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSIHRMR*LHTPGC
Trigger: GCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAAT...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
ENST00000466983.1
3UTR-3UTR TCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGGCACATTCACAGAATaGGATGGCTGCACACCCCAG +
Preference number: 2 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHGTFTE*DGCTPQ
Trigger: CTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCC...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR TCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGAGCTGGCTGCAAGGGTaGAATGGAAGAACTAAGCCG +
Preference number: 2 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGSWLQG*NGRTKP
Trigger: CGGCTTAGTTCTTCCATTTCACCCTTGCAGCCAGCT...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACACCAAGTTGGCGTCAATaGTGTAGGTTGGGAAGTCAG +
Preference number: 2 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATPSWRQ*CRLGSQ
Trigger: CTGACTTCCCAACCTACAGCATTGACGCCAACTTGG...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAAATTCACAGAATGAGATaGCTGCACACCCCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKIHRMR*LHTPGC
Trigger: GCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAAT...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp TCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCCAGCAGGACAAGCCCTaGGCCTGCCAGCTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: SGLSFWTKPFSQQSIIKAQQDKP*ACQLSP
Trigger: TGGGGAGAGCTGGCAGGCCCAGGGCTTGTCCTGCTG...GGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGTCCGGCTTGTCCTTCTaGACAAAACCCTTTTCCCAA +
Preference number: 2 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKSGLSF*TKPFSQ
Trigger: TTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR CAA 90 bp GCTCCTGCTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTaGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCC +
Preference number: 2 (lower is better)
Translates to: APAPSSSSGSTEVAH*SGLSFWTKPFSQQS
Trigger: GGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAGCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR TCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAGGCACATTCACAGAATaGGATGGCTGCACACCCCAG +
Preference number: 2 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQGTFTE*DGCTPQ
Trigger: CTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCC...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR TCA 90 bp ACCCACATCAAAGATCGTGGAATGCTTCCAGTAGAGGATGATCTCGGGGATGTTCCCGCAGGGACTGCATaGTCTCCTGCGCGTCAATGC +
Preference number: 2 (lower is better)
Translates to: THIKDRGMLPVEDDLGDVPAGTA*SPARQC
Trigger: GCATTGACGCGCAGGAGATCATGCAGTCCCTGCGGG...AACATCCCCGAGATCATCCTCTACTGGAAGCATTCCACGATCTTTGATGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472769.5
3UTR-3UTR GCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGTGGCCAACAGCTGGCTaGAAGGGTGAAATGGAAGAA +
Preference number: 2 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGWPTAG*KGEMEE
Trigger: TTCTTCCATTTCACCCTTGCAGCCAGCTGTTGGCCA...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGCTCCAAGCTCGCTATTaGCAGGCACTGCAGAAAATG +
Preference number: 2 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGLQARY*QALQKM
Trigger: CATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAG...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAGTCAATGCTGTAGGTTaGGAAGTCAGGCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQVNAVG*EVRPGR
Trigger: CCTCCCAGGCCTGACTTCCCAACCTACAGCATTGAC...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR CAA 90 bp AACCCTCGCAGCGCAGGAAATAACTGGATTCCACCTTCAAGGTTATaGAGGTTCCTCCCTCTCTCTCCACGCCCCCAGTCAAACCCTGAA +
Preference number: 2 (lower is better)
Translates to: NPRSAGNNWIPPSRL*RFLPLSPRPQSNPE
Trigger: TTCAGGGTTTGACTGGGGGCGTGGAGAGAGAGGGAGGAACCTCAATAACCTTGAAGGTGGAATCCAGTTATTTCCTGCGCTGCGAGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR TCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGCACATTCACAGAATaGGATGGCTGCACACCCCAG +
Preference number: 2 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGIGTFTE*DGCTPQ
Trigger: CTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCC...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCACCAACAGGAGGGTCTaGTGGGGTCAGCAGGACAAG +
Preference number: 2 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSTNRRV*WGQQDK
Trigger: CTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGT...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGACCAACAGGAGGGTCTaGTGGGGTCAGCAGGACAAG +
Preference number: 2 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQTNRRV*WGQQDK
Trigger: CTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGT...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGGCTATTGGCAGGCACTaGAGAAAATGTCCTGTCCTT +
Preference number: 2 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGAIGRH*RKCPVL
Trigger: AAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGC...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAATTCACAGAATGAGATaGCTGCACACCCCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQIHRMR*LHTPGC
Trigger: GCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAAT...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATCTCCAAGCTCGCTATTaGCAGGCACTGCAGAAAATG +
Preference number: 2 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHLQARY*QALQKM
Trigger: CATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAG...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTCTCCAAGCTCGCTATTaGCAGGCACTGCAGAAAATG +
Preference number: 2 (lower is better)
Translates to: LPRLPLEAQKSLICPACPLQARY*QALQKM
Trigger: CATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAG...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATTTCATCATGGATTATaGGATTGGACGAGGGGGTGG +
Preference number: 2 (lower is better)
Translates to: EHTNALPFALKHGAPLPSFHHGL*DWTRGW
Trigger: CCACCCCCTCGTCCAATCCCATAATCCATGATGAAA...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR TCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTAGCTGGCTGCAAGGGTaGAATGGAAGAACTAAGCCG +
Preference number: 2 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGISWLQG*NGRTKP
Trigger: CGGCTTAGTTCTTCCATTTCACCCTTGCAGCCAGCT...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR TCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAATAGGTTCCAAGCAGTaGCACAAGTGGAATGTGGGG +
Preference number: 2 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQIGSKQ*HKWNVG
Trigger: CCCCACATTCCACTTGTGTCACTGCTTGGAACCTAT...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTGCTATTGGCAGGCACTaGAGAAAATGTCCTGTCCTT +
Preference number: 2 (lower is better)
Translates to: LPRLPLEAQKSLICPACPAIGRH*RKCPVL
Trigger: AAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGC...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATTTTCATCATGGATTATaGGATTGGACGAGGGGGTGG +
Preference number: 2 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHFHHGL*DWTRGW
Trigger: CCACCCCCTCGTCCAATCCCATAATCCATGATGAAA...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCACCTCACCTTTCATCATaGATTATGGGATTGGACGAG +
Preference number: 2 (lower is better)
Translates to: EHTNALPFALKHGAPLPSPHLSS*IMGLDE
Trigger: CTCGTCCAATCCCATAATCCATGATGAAAGGTGAGG...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAGCTATTGGCAGGCACTaGAGAAAATGTCCTGTCCTT +
Preference number: 2 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQAIGRH*RKCPVL
Trigger: AAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGC...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTCTCCAAGCTCGCTATTaGCAGGCACTGCAGAAAATG +
Preference number: 2 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGILQARY*QALQKM
Trigger: CATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAG...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTCCTCACCTTTCATCATaGATTATGGGATTGGACGAG +
Preference number: 2 (lower is better)
Translates to: LPRLPLEAQKSLICPACPPHLSS*IMGLDE
Trigger: CTCGTCCAATCCCATAATCCATGATGAAAGGTGAGG...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTGGCCAACAGCTGGCTaGAAGGGTGAAATGGAAGAA +
Preference number: 2 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQWPTAG*KGEMEE
Trigger: TTCTTCCATTTCACCCTTGCAGCCAGCTGTTGGCCA...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR GCA 90 bp GTTTTCCACGGGGTGGAGGAGGTGGTAGTCTCTCCACTCGTTCCAGTCAATGGTTCTTCAAAGTCTAGCTaGCCATCAAGGTCCTTATCT +
Preference number: 2 (lower is better)
Translates to: VFHGVEEVVVSPLVPVNGSSKSS*PSRSLS
Trigger: AGATAAGGACCTTGATGGGCAGCTAGACTTTGAAGA...ACCATTGACTGGAACGAGTGGAGAGACTACCACCTCCTCCACCCCGTGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472769.5
3UTR-3UTR CCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGCCTTCACAGCCAAGTTaGCGTCAATGCTGTAGGTTG +
Preference number: 2 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQPSQPS*RQCCRL
Trigger: CAACCTACAGCATTGACGCCAACTTGGCTGTGAAGG...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR CAA 90 bp CCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTaGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAG +
Preference number: 2 (lower is better)
Translates to: PSSSSGSTEVAHLSG*SFWTKPFSQQSIIK
Trigger: CTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGCCTCACCTTTCATCATaGATTATGGGATTGGACGAG +
Preference number: 2 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQPHLSS*IMGLDE
Trigger: CTCGTCCAATCCCATAATCCATGATGAAAGGTGAGG...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR GCA 72 bp CCTTCTGTGCAGCCAGGCCAGGCAGCCCGAGCCCCCTaGACTCCCAAGCATGCCCGAGAGCCCCAGCCATCA +
Preference number: 3 (lower is better)
Translates to: PSVQPGQAARAP*TPKHAREPQPS
Trigger: TGATGGCTGGGGCTCTCGGGCATGCTTGGGAGTGCAGGGGGCTCGGGCTGCCTGGCCTGGCTGCACAGAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR TCA 72 bp ACAGCCCGAAGGCCCCCTCGGTCCGCAGGATATGTTTaGAGAGGCTGCTCATGGTCACCTCCGGAGCGCCCT +
Preference number: 3 (lower is better)
Translates to: TARRPPRSAGYV*RGCSWSPPERP
Trigger: AGGGCGCTCCGGAGGTGACCATGAGCAGCCTCTTCAAACATATCCTGCGGACCGAGGGGGCCTTCGGGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466983.1
3UTR TCA 72 bp AGGGCAGGGGCCGTGGCCAACAGCTGGCTGCAAGGGTaGAATGGAAGAACTAAGCCGGCCTCCAGGCTCCAA +
Preference number: 3 (lower is better)
Translates to: RAGAVANSWLQG*NGRTKPASRLQ
Trigger: TTGGAGCCTGGAGGCCGGCTTAGTTCTTCCATTTCACCCTTGCAGCCAGCTGTTGGCCACGGCCCCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR GCA 72 bp CAGACCAGAGGGCAGGGGCCGTGGCCAACAGCTGGCTaGAAGGGTGAAATGGAAGAACTAAGCCGGCCTCCA +
Preference number: 3 (lower is better)
Translates to: QTRGQGPWPTAG*KGEMEELSRPP
Trigger: TGGAGGCCGGCTTAGTTCTTCCATTTCACCCTTGCAGCCAGCTGTTGGCCACGGCCCCTGCCCTCTGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CAA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGGTCCGCAGGATATGTTaGAAGAGGCTGCTCATGGTC +
Preference number: 3 (lower is better)
Translates to: ALPTLPAGASRVFTAWLEVRRIC*KRLLMV
Trigger: GACCATGAGCAGCCTCTTCAAACATATCCTGCGGAC...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466983.1
3UTR-3UTR CAA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGGCTCCAAGCTCGCTATaGGCAGGCACTGCAGAAAAT +
Preference number: 3 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKAPSSL*AGTAEN
Trigger: ATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGC...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CAA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAACATGAGCCCCAGCACTaGCCTTCTGTGCAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQHEPQH*PSVQPG
Trigger: GCCTGGCTGCACAGAAGGCAAGTGCTGGGGCTCATG...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR TCA 72 bp GGCTCGAGACAGCTTAGTGTTGGCACATTCACAGAATaGGATGGCTGCACACCCCAGGCTGCGGCCCAGGAT +
Preference number: 3 (lower is better)
Translates to: GSRQLSVGTFTE*DGCTPQAAAQD
Trigger: ATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACACTAAGCTGTCTCGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
ENST00000466983.1
3UTR TCA 72 bp ATGTCCTGTCCTTACACATGTGAGCCCGGAGCCTGCTaGCCCTGGACCCTAAGGAATGCCTGTGGTCTTCGC +
Preference number: 3 (lower is better)
Translates to: MSCPYTCEPGAC*PWTLRNACGLR
Trigger: GCGAAGACCACAGGCATTCCTTAGGGTCCAGGGTCAGCAGGCTCCGGGCTCACATGTGTAAGGACAGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR GCA 72 bp ACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTaGCCTCATGCCACAGTGGGGACAGTGAGTTTGGTT +
Preference number: 3 (lower is better)
Translates to: TLCPSPSNMVLH*PHATVGTVSLV
Trigger: AACCAAACTCACTGTCCCCACTGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR GCA 72 bp GCGTCAGAACAGACTCTGAGCAGTCAGCCAAGCTCCTaGTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGC +
Preference number: 3 (lower is better)
Translates to: ASEQTLSSQPSS*SLVFLWKHRSR
Trigger: GCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAGCAGGAGCTTGGCTGACTGCTCAGAGTCTGTTCTGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR CCA 72 bp GGGAGGCCACGTGACCTCACCTTTCATCATGGATTATaGGATTGGACGAGGGGGTGGGATGTGGGCTGTAGC +
Preference number: 3 (lower is better)
Translates to: GRPRDLTFHHGL*DWTRGWDVGCS
Trigger: GCTACAGCCCACATCCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR CCA 72 bp CTGGTGGAATGGAAGTGCAACCGTGAGGTCGCCAGTTaGCCGGCATTGTTAAGCAAGGGCAGCAGAAGGCTG +
Preference number: 3 (lower is better)
Translates to: LVEWKCNREVAS*PALLSKGSRRL
Trigger: CAGCCTTCTGCTGCCCTTGCTTAACAATGCCGGCCAACTGGCGACCTCACGGTTGCACTTCCATTCCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR TCA 72 bp GCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTaGGCCCGGAGCCTGCTGACCCTGGACCCTAAGGAA +
Preference number: 3 (lower is better)
Translates to: AGTAENVLSLHM*ARSLLTLDPKE
Trigger: TTCCTTAGGGTCCAGGGTCAGCAGGCTCCGGGCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR CCA 72 bp CCACGTGACCTCACCTTTCATCATGGATTATGGGATTaGACGAGGGGGTGGGATGTGGGCTGTAGCCCTCCT +
Preference number: 3 (lower is better)
Translates to: PRDLTFHHGLWD*TRGWDVGCSPP
Trigger: AGGAGGGCTACAGCCCACATCCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR TCA 72 bp CCTCTCCTCCAGCCCCCGCCCACCACAAATTCACAGTaGGAGGCACCTCACTGCCTTGACATTCAGAAAAGA +
Preference number: 3 (lower is better)
Translates to: PLLQPPPTTNSQ*EAPHCLDIQKR
Trigger: TCTTTTCTGAATGTCAAGGCAGTGAGGTGCCTCTCACTGTGAATTTGTGGTGGGCGGGGGCTGGAGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR CCA 72 bp ACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTaGGATGTGGGCTGTAGCCCTCCTCCCACCTTACCT +
Preference number: 3 (lower is better)
Translates to: TFHHGLWDWTRG*DVGCSPPPTLP
Trigger: AGGTAAGGTGGGAGGAGGGCTACAGCCCACATCCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CAA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCTCCAAGCTCGCTATaGGCAGGCACTGCAGAAAAT +
Preference number: 3 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHAPSSL*AGTAEN
Trigger: ATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGC...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CAA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTGCTCCAAGCTCGCTATaGGCAGGCACTGCAGAAAAT +
Preference number: 3 (lower is better)
Translates to: LPRLPLEAQKSLICPACPAPSSL*AGTAEN
Trigger: ATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGC...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CAA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTTCATGGATTATGGGATaGGACGAGGGGGTGGGATGT +
Preference number: 3 (lower is better)
Translates to: LPRLPLEAQKSLICPACPSWIMG*DEGVGC
Trigger: ACATCCCACCCCCTCGTCCAATCCCATAATCCATGA...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR TCA 72 bp TGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCACGTaGCCTCACCTTTCATCATGGATTATGGGATTGGAC +
Preference number: 3 (lower is better)
Translates to: CCRLGSQAWEAT*PHLSSWIMGLD
Trigger: GTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTTCCCAACCTACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR TCA 72 bp TCATCAGGTCATTCTGGTGGAATGGAAGTGCAACCGTaGGGTCGCCAGTTGGCCGGCATTGTTAAGCAAGGG +
Preference number: 3 (lower is better)
Translates to: SSGHSGGMEVQP*GRQLAGIVKQG
Trigger: CCCTTGCTTAACAATGCCGGCCAACTGGCGACCTCACGGTTGCACTTCCATTCCACCAGAATGACCTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR CCA 72 bp AGAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTaGCAGGCACTGCAGAAAATGTCCTGTCCTTACACA +
Preference number: 3 (lower is better)
Translates to: RTKPASRLQARY*QALQKMSCPYT
Trigger: TGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CAA 90 bp TCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCGTGGGGACAGTGAGTTaGGTTCTGAGGTGGGGCCCA +
Preference number: 3 (lower is better)
Translates to: SGLSFWTKPFSQQSIIKAVGTVS*VLRWGP
Trigger: TGGGCCCCACCTCAGAACCAAACTCACTGTCCCCAC...GGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR TCA 72 bp GCGCAGGAAATAACTGGATTCCACCTTCAAGGTTATTaGGGTTCCTCCCTCTCTCTCCACGCCCCCAGTCAA +
Preference number: 3 (lower is better)
Translates to: AQEITGFHLQGY*GSSLSLHAPSQ
Trigger: TTGACTGGGGGCGTGGAGAGAGAGGGAGGAACCTCAATAACCTTGAAGGTGGAATCCAGTTATTTCCTGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR GCA 72 bp TGTTCAGATATCTTGACTCCCAAGTCCCGCAGGGACTaGATGATCTCCTGCGCGTCAATGCGTCCATCATTC +
Preference number: 3 (lower is better)
Translates to: CSDILTPKSRRD*MISCASMRPSF
Trigger: GAATGATGGACGCATTGACGCGCAGGAGATCATGCAGTCCCTGCGGGACTTGGGAGTCAAGATATCTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472769.5
3UTR-3UTR CAA 90 bp TCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCCGTCAATGCTGTAGGTaGGGAAGTCAGGCCTGGGAG +
Preference number: 3 (lower is better)
Translates to: SGLSFWTKPFSQQSIIKARQCCR*GSQAWE
Trigger: CTCCCAGGCCTGACTTCCCAACCTACAGCATTGACG...GGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR-3UTR CAA 90 bp GTTTTCCACGGGGTGGAGGAGGTGGTAGTCTCTCCACTCGTTCCAGTCAATGGTGTCCTTATCTCCAGCTaGTACAATTTTCGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: VFHGVEEVVVSPLVPVNGVLISS*YNFRSW
Trigger: CCAGCTGCGAAAATTGTACAAGCTGGAGATAAGGAC...ACCATTGACTGGAACGAGTGGAGAGACTACCACCTCCTCCACCCCGTGGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472769.5
3UTR GCA 72 bp AGATTTCCTCATCAGGTCATTCTGGTGGAATGGAAGTaGAACCGTGAGGTCGCCAGTTGGCCGGCATTGTTA +
Preference number: 3 (lower is better)
Translates to: RFPHQVILVEWK*NREVASWPALL
Trigger: TAACAATGCCGGCCAACTGGCGACCTCACGGTTGCACTTCCATTCCACCAGAATGACCTGATGAGGAAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR GCA 72 bp TTGACTCCCAAGTCCCGCAGGGACTGCATGATCTCCTaGGCGTCAATGCGTCCATCATTCTTTTTGTCCAAA +
Preference number: 3 (lower is better)
Translates to: LTPKSRRDCMIS*ASMRPSFFLSK
Trigger: TTTGGACAAAAAGAATGATGGACGCATTGACGCGCAGGAGATCATGCAGTCCCTGCGGGACTTGGGAGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472769.5
3UTR CCA 72 bp CCCTTCTCCTCCTCCTCCCATCCCACTGGGCGGGCTTaGGAAGGTACAATCAACCATGAACATAAATATGAA +
Preference number: 3 (lower is better)
Translates to: PFSSSSHPTGRA*EGTINHEHKYE
Trigger: TTCATATTTATGTTCATGGTTGATTGTACCTTCCCAAGCCCGCCCAGTGGGATGGGAGGAGGAGGAGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR CCA 72 bp CATCCTATTGAAGATTTCCTCATCAGGTCATTCTGGTaGAATGGAAGTGCAACCGTGAGGTCGCCAGTTGGC +
Preference number: 3 (lower is better)
Translates to: HPIEDFLIRSFW*NGSATVRSPVG
Trigger: GCCAACTGGCGACCTCACGGTTGCACTTCCATTCCACCAGAATGACCTGATGAGGAAATCTTCAATAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR CCA 72 bp TTGCATCCTATTGAAGATTTCCTCATCAGGTCATTCTaGTGGAATGGAAGTGCAACCGTGAGGTCGCCAGTT +
Preference number: 3 (lower is better)
Translates to: LHPIEDFLIRSF*WNGSATVRSPV
Trigger: AACTGGCGACCTCACGGTTGCACTTCCATTCCACCAGAATGACCTGATGAGGAAATCTTCAATAGGATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR CCA 72 bp AGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTTCTaGACAAAACCCTTTTCCCAACAGTCCATAATTAAG +
Preference number: 3 (lower is better)
Translates to: STEVAHLSGLSF*TKPFSQQSIIK
Trigger: CTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTCTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
CDS-3UTR TCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCCCTGCATCCGGGTCCTaGCTAGGGCCAGGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGPASGS*LGPGGS
Trigger: GCTACCCCCTGGCCCTAGTCAGGACCCGGATGCAGG...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR CCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCGATCGTCCCCCTCTCTaGAGCCGTGGCACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGDRPPL*SRGTQP
Trigger: GGGCTGGGTGCCACGGCTCCAGAGAGGGGGACGATC...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR GCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCCCCTGCCCCACCTCCTaGCACCAGGTGTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGPCPTS*HQVSPP
Trigger: TGGTGGAGACACCTGGTGGCAGGAGGTGGGGCAGGG...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR GCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCCTGCACACCCCAGGCTaGGGCCCAGGATCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGLHTPG*GPGSAS
Trigger: ACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAG...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR CCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCTGCTGCTCTGGGCGATaGCCCCTGCCAAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGCCSGR*PLPRTL
Trigger: CAGGGTCCTTGGCAGGGGCCATCGCCCAGAGCAGCA...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCCGAGGGGGTGGGATGTaGGCTGTAGCCCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGRGGGM*AVALLP
Trigger: TGGGAGGAGGGCTACAGCCCACATCCCACCCCCTCG...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCAGTGGAATGTGGGGCTaGTCCCGCTGCGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGSGMWG*SRCAPA
Trigger: AGCAGGGGCGCAGCGGGACCAGCCCCACATTCCACT...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCGAGCCCGGAGCCTGCTaGCCCTGGACCCTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGEPGAC*PWTLRN
Trigger: ATTCCTTAGGGTCCAGGGTCAGCAGGCTCCGGGCTC...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCCTGCACTCCCAAGCATaGCCGAGAGCCCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGLHSQA*PRAPAI
Trigger: GATGGCTGGGGCTCTCGGGCATGCTTGGGAGTGCAG...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGGCAAGCCAGGCGCTCTaGAGCTGGGAGCGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLEASQAL*SWERGL
Trigger: GAGCCCGCGCTCCCAGCTGCAGAGCGCCTGGCTTGC...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373068.6
CDS-3UTR GCA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGGAGCTCGCCCTCGGTaGGGTGCAGTCCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: QNEMAAHPRLRPRISESTGARPR*GAVPGA
Trigger: GGCGCCTGGGACTGCACCGCACCGAGGGCGAGCTCC...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373068.6
CDS-3UTR CCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCTGGCTACACAGCTGCTaGGAGGACGGGCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGWLHSC*EDGPGV
Trigger: AACCCCAGGCCCGTCCTCCCAGCAGCTGTGTAGCCA...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR TCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTATTGCCCCGCCAGAGTaGCCTGGCCCCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTIAPPE*PGPSFS
Trigger: CGAGAAGGAGGGGCCAGGTCACTCTGGCGGGGCAAT...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCCAGCTCAGAGCACCATaGGCCCCAGCACTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGQLRAP*APALAF
Trigger: GAAGGCAAGTGCTGGGGCTCATGGTGCTCTGAGCTG...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTCCCTGCCCCACCTCCTaGCACCAGGTGTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTPCPTS*HQVSPP
Trigger: TGGTGGAGACACCTGGTGGCAGGAGGTGGGGCAGGG...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTCGAGGGGGTGGGATGTaGGCTGTAGCCCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTRGGGM*AVALLP
Trigger: TGGGAGGAGGGCTACAGCCCACATCCCACCCCCTCG...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTAGGGCAGCAGAAGGCTaGGAGGGACGGAGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTRAAEG*EGRSQS
Trigger: GGACTGGCTCCGTCCCTCCCAGCCTTCTGCTGCCCT...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCGGGCTCAGATGCCAGTaGCCACAAGGCCAGATCCTT +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGGLRCQ*PQGQIL
Trigger: AAGGATCTGGCCTTGTGGTCACTGGCATCTGAGCCC...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTATGGAAGTGCAACCGTaGGGTCGCCAGTTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTMEVQP*GRQLAG
Trigger: GCCGGCCAACTGGCGACCTCACGGTTGCACTTCCAT...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCCGATGCCCATGTTGTTaGTGCGGGAGGCATGGACCT +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGRCPCC*CGRHGP
Trigger: AGGTCCATGCCTCCCGCAGCAACAACATGGGCATCG...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGCTGCACACCCCAGGCTaGGGCCCAGGATCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLELHTPG*GPGSAS
Trigger: ACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAG...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR GCA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGACAAGCCCTGGGCCTaGCAGCTCTCCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: QNEMAAHPRLRPRISESTDKPWA*QLSPPS
Trigger: GGAGGGTGGGGAGAGCTGGCAGGCCCAGGGCTTGTC...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR GCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCACCAACAGGAGGGTCTaGTGGGGTCAGCAGGACAAG +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGTNRRV*WGQQDK
Trigger: CTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGT...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR GCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTGCAGCCCGAGCCCCCTaGACTCCCAAGCATGCCCGA +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETAAARAP*TPKHAR
Trigger: TCGGGCATGCTTGGGAGTGCAGGGGGCTCGGGCTGC...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCAGCCCGAGCCCCCTaGACTCCCAAGCATGCCCGA +
Preference number: 4 (lower is better)
Translates to: QNEMAAHPRLRPRISESTAARAP*TPKHAR
Trigger: TCGGGCATGCTTGGGAGTGCAGGGGGCTCGGGCTGC...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTGTCCCGCTGCGCCCCTaGTGGGGTTGGACAGGAACC +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETAVPLRP*WGWTGT
Trigger: GGTTCCTGTCCAACCCCAGCAGGGGCGCAGCGGGAC...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AGCCCCCTGTACAGCCCGAAGGCCCCCTCGGTCCGCAGGATATGTTTGAAGAGGGGGCCGTGCAGGTTCTaGATACGGCCCCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SPLYSPKAPSVRRICLKRGPCRF*IRPLPH
Trigger: GTGGGGCAGGGGCCGTATCCAGAACCTGCACGGCCC...CCTCTTCAAACATATCCTGCGGACCGAGGGGGCCTTCGGGCTGTACAGGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR CCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGAGAGGGCAGGGGCCGTaGCCAACAGCTGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLERGQGP*PTAGCK
Trigger: CTTGCAGCCAGCTGTTGGCCACGGCCCCTGCCCTCT...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTGACACAAGTGGAATGTaGGGCTGGTCCCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTDTSGM*GWSRCA
Trigger: GGCGCAGCGGGACCAGCCCCACATTCCACTTGTGTC...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTCACAGGCGCAGCCGGTaGTCCGGGCCCCCGCAGATA +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPHRRSR*SGPPQI
Trigger: TATCTGCGGGGGCCCGGACCACCGGCTGCGCCTGTG...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373068.6
CDS-3UTR TCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCGCTGTTCAGATATCTTaGCTCCCAAGTCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGAVQIS*LPSPAG
Trigger: CCCTGCGGGACTTGGGAGTCAAGATATCTGAACAGC...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCCCTGCATCCGGGTCCTaGCTAGGGCCAGGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISPASGS*LGPGGS
Trigger: GCTACCCCCTGGCCCTAGTCAGGACCCGGATGCAGG...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR TCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACACACGGACGCCGGCGATaGGGCAGACGAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATHGRRR*GRRRGG
Trigger: GCCGCCTCTTCGTCTGCCTCATCGCCGGCGTCCGTG...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373068.6
CDS-3UTR TCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGACCACCGCCAGGTCGTTaGCACACAGGCCGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGPPPGR*HTGRRP
Trigger: GGGACGGCGGCCTGTGTGTCAACGACCTGGCGGTGG...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373068.6
CDS-3UTR GCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCGAGCGTCTCGTAGACTaGAAGGTCGATGCCGGCATA +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGERLVD*KVDAGI
Trigger: TATGCCGGCATCGACCTTGCAGTCTACGAGACGCTC...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR GCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGGACAAGCCCTGGGCCTaGCAGCTCTCCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKDKPWA*QLSPPS
Trigger: GGAGGGTGGGGAGAGCTGGCAGGCCCAGGGCTTGTC...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGGCAGCCCGAGCCCCCTaGACTCCCAAGCATGCCCGA +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKAARAP*TPKHAR
Trigger: TCGGGCATGCTTGGGAGTGCAGGGGGCTCGGGCTGC...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTGCTCCACTGCCCTCATaGCACAGTGGGGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTAPLPS*HSGDSE
Trigger: CTCACTGTCCCCACTGTGGCATGAGGGCAGTGGAGC...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGGTCCCGCTGCGCCCCTaGTGGGGTTGGACAGGAACC +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKVPLRP*WGWTGT
Trigger: GGTTCCTGTCCAACCCCAGCAGGGGCGCAGCGGGAC...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGGTCCCGCTGCGCCCCTaGTGGGGTTGGACAGGAACC +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLVPLRP*WGWTGT
Trigger: GGTTCCTGTCCAACCCCAGCAGGGGCGCAGCGGGAC...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGAGCGGCACAACACACTaGTCACCATCGGGCGCGAGG +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLESGTTH*SPSGAR
Trigger: CCTCGCGCCCGATGGTGAGCAGTGTGTTGTGCCGCT...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373068.6
CDS-3UTR CCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTGGGCCGTGCAGGTTCTaGATACGGCCCCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPGPCRF*IRPLPH
Trigger: GTGGGGCAGGGGCCGTATCCAGAACCTGCACGGCCC...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGGGGCCGTGCAGGTTCTaGATACGGCCCCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLGPCRF*IRPLPH
Trigger: GTGGGGCAGGGGCCGTATCCAGAACCTGCACGGCCC...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTGCTGGCCACAGGTACTaGACATGGTGCCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTAGHRY*TWCHRP
Trigger: TGGCCTGTGGCACCATGTCCAGTACCTGTGGCCAGC...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGCTCCTCCCATCCCACTaGGCGGGCTTGGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLELLPSH*AGLGRY
Trigger: GTACCTTCCCAAGCCCGCCCAGTGGGATGGGAGGAG...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCCGTGAGGTCGCCAGTTaGCCGGCATTGTTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGREVAS*PALLSK
Trigger: CTTGCTTAACAATGCCGGCCAACTGGCGACCTCACG...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTCCCTCTCTGGAGCCGTaGCACCCAGCCCTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETAPSLEP*HPALGK
Trigger: TTTCCCCAGGGCTGGGTGCCACGGCTCCAGAGAGGG...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
3UTR CAA 72 bp TACAGCCCGAAGGCCCCCTCGGTCCGCAGGATATGTTaGAAGAGGCTGCTCATGGTCACCTCCGGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: YSPKAPSVRRIC*KRLLMVTSGAP
Trigger: GGGCGCTCCGGAGGTGACCATGAGCAGCCTCTTCAAACATATCCTGCGGACCGAGGGGGCCTTCGGGCTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR TCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGTCTGGGCTTCCCCGATaGCCGGCACATACAGGCACA +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLESGLPR*PAHTGT
Trigger: TGTGCCTGTATGTGCCGGTCATCGGGGAAGCCCAGA...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR TCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCATTGCCCCGCCAGAGTaGCCTGGCCCCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISIAPPE*PGPSFS
Trigger: CGAGAAGGAGGGGCCAGGTCACTCTGGCGGGGCAAT...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTGCAGTCCAGCATTCCTaGGTACTGGCCTGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTAVQHS*VLACLP
Trigger: CGGAAGACAGGCCAGTACTCAGGAATGCTGGACTGC...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACACCTGCATCCGGGTCCTaGCTAGGGCCAGGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATPASGS*LGPGGS
Trigger: GCTACCCCCTGGCCCTAGTCAGGACCCGGATGCAGG...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGCCCCCAGTCAAACCCTaGAATCCTAAGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLEPPVKP*NPKAGG
Trigger: GCCCCCAGCCTTAGGATTTCAGGGTTTGACTGGGGG...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CCGAAGGCCCCCTCGGTCCGCAGGATATGTTTGAAGAGGCTGCTCATGGTCACCCCCTGCCCCACCTCCTaGCACCAGGTGTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: PKAPSVRRICLKRLLMVTPCPTS*HQVSPP
Trigger: TGGTGGAGACACCTGGTGGCAGGAGGTGGGGCAGGG...GGTGACCATGAGCAGCCTCTTCAAACATATCCTGCGGACCGAGGGGGCCTTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR GCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGCGGGAGGCATGGACCTaGATGAGCACCTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLEREAWT*MSTLSL
Trigger: CAGGCTCAAGGTGCTCATGCAGGTCCATGCCTCCCG...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGCTGGGCGATGGCCCCTaGCAAGGACCCTGCCACAAG +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRLGDGP*QGPCHK
Trigger: CTTGTGGCAGGGTCCTTGGCAGGGGCCATCGCCCAG...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTATAGAGGCTTGCGCCTaGATCCGGGTCCTGACTAGG +
Preference number: 4 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTIEACA*IRVLTR
Trigger: CCTAGTCAGGACCCGGATGCAGGCGCAAGCCTCTAT...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGCCCCGTCACCGCGACTaGACGCCCAGGGTGATCTTC +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLPRHRD*TPRVIF
Trigger: GAAGATCACCCTGGGCGTGCAGTCGCGGTGACGGGG...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGCCCCGTCACCGCGACTaGACGCCCAGGGTGATCTTC +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKPRHRD*TPRVIF
Trigger: GAAGATCACCCTGGGCGTGCAGTCGCGGTGACGGGG...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CCGAAGGCCCCCTCGGTCCGCAGGATATGTTTGAAGAGGCTGCTCATGGTCACCCCCCGTCACCGCGACTaGACGCCCAGGGTGATCTTC +
Preference number: 4 (lower is better)
Translates to: PKAPSVRRICLKRLLMVTPRHRD*TPRVIF
Trigger: GAAGATCACCCTGGGCGTGCAGTCGCGGTGACGGGG...GGTGACCATGAGCAGCCTCTTCAAACATATCCTGCGGACCGAGGGGGCCTTCGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR GCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCCTGCACACCCCAGGCTaGGGCCCAGGATCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISLHTPG*GPGSAS
Trigger: ACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAG...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR GCA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCAGCAGCCCGAGCCCCCTaGACTCCCAAGCATGCCCGA +
Preference number: 4 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPAARAP*TPKHAR
Trigger: TCGGGCATGCTTGGGAGTGCAGGGGGCTCGGGCTGC...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTCGCCCTCAAACATGGTaGTCCACTGCCCTCATGCCA +
Preference number: 4 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTRPQTW*STALMP
Trigger: TGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCG...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTTCGCCCTCGGTGCGGTaGAGTCCCAGGCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LPRLPLEAQKSLICPACPSPSVR*SPRRRS
Trigger: GCTGCGGCGCCTGGGACTGCACCGCACCGAGGGCGA...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373068.6
CDS-3UTR GCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGCTCTGGCTACACAGCTaGTGGGAGGACGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLLWLHS*WEDGPG
Trigger: CCCAGGCCCGTCCTCCCAGCAGCTGTGTAGCCAGAG...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR CCA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTATGTTGGCGGCCTGCTaGGTGCTCCACTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: QNEMAAHPRLRPRISESTMLAAC*VLHCPH
Trigger: GTGAGGGCAGTGGAGCACCCAGCAGGCCGCCAACAT...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR CCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGTGCTGCTCTGGGCGATaGCCCCTGCCAAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRCCSGR*PLPRTL
Trigger: CAGGGTCCTTGGCAGGGGCCATCGCCCAGAGCAGCA...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGCAGCAGGACAAGCCCTaGGCCTGCCAGCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRQQDKP*ACQLSP
Trigger: TGGGGAGAGCTGGCAGGCCCAGGGCTTGTCCTGCTG...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR CCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGCAGCAGGACAAGCCCTaGGCCTGCCAGCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKQQDKP*ACQLSP
Trigger: TGGGGAGAGCTGGCAGGCCCAGGGCTTGTCCTGCTG...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCCAGCAGGACAAGCCCTaGGCCTGCCAGCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISQQDKP*ACQLSP
Trigger: TGGGGAGAGCTGGCAGGCCCAGGGCTTGTCCTGCTG...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR CCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCAGAGGGCAGGGGCCGTaGCCAACAGCTGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISRGQGP*PTAGCK
Trigger: CTTGCAGCCAGCTGTTGGCCACGGCCCCTGCCCTCT...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGGATTGGACGAGGGGGTaGGATGTGGGCTGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLEDWTRG*DVGCSP
Trigger: AGGGCTACAGCCCACATCCCACCCCCTCGTCCAATC...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCACCGCTGCGCCCCTGCTaGGGTTGGACAGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSPLRPC*GWTGTP
Trigger: GGGGGTTCCTGTCCAACCCCAGCAGGGGCGCAGCGG...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGAGGGCAGCAGAAGGCTaGGAGGGACGGAGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRRAAEG*EGRSQS
Trigger: GGACTGGCTCCGTCCCTCCCAGCCTTCTGCTGCCCT...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGCAGGCGCTCTGCAGCTaGGAGCGCGGGCTCGGAGAC +
Preference number: 4 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGQALCS*ERGLGD
Trigger: GTCTCCGAGCCCGCGCTCCCAGCTGCAGAGCGCCTG...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373068.6
CDS-3UTR CCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGCCCTCTCTGGAGCCGTaGCACCCAGCCCTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKPSLEP*HPALGK
Trigger: TTTCCCCAGGGCTGGGTGCCACGGCTCCAGAGAGGG...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR CCA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTTCTCCAGGCAGGGGCTaGGGTGCCTCTGACTTCACG +
Preference number: 4 (lower is better)
Translates to: QNEMAAHPRLRPRISESTSPGRG*GASDFT
Trigger: CGTGAAGTCAGAGGCACCCCAGCCCCTGCCTGGAGA...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR TCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGGCCTCTCCTCCACTGTaGACTCATCCGGGACCGTTA +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLEASPPL*THPGPL
Trigger: TAACGGTCCCGGATGAGTTCACAGTGGAGGAGAGGC...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACAATTGCCCCGCCAGAGTaGCCTGGCCCCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATIAPPE*PGPSFS
Trigger: CGAGAAGGAGGGGCCAGGTCACTCTGGCGGGGCAAT...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAACCTGCATCCGGGTCCTaGCTAGGGCCAGGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKPASGS*LGPGGS
Trigger: GCTACCCCCTGGCCCTAGTCAGGACCCGGATGCAGG...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCTCCGCAGGATATGTTTaGAGAGGCTGCTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGSAGYV*RGCSWS
Trigger: TGACCATGAGCAGCCTCTTCAAACATATCCTGCGGA...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR TCA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTTTCTCTGGACAGATGTaGCTGCAGCGGCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: QNEMAAHPRLRPRISESTFSGQM*LQRPKA
Trigger: GGCCTTGGGCCGCTGCAGTCACATCTGTCCAGAGAA...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTATGGAAGTGCAACCGTaGGGTCGCCAGTTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPMEVQP*GRQLAG
Trigger: GCCGGCCAACTGGCGACCTCACGGTTGCACTTCCAT...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACAGGCCGCCGTCCCGGTTaGCGTCGAGCGTCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATGRRPG*RRASER
Trigger: TCTTTCAGACGCTCGACGTCAACCGGGACGGCGGCC...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373068.6
CDS-3UTR TCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGCTGTCGTGCCCGGCCTaGGAAGTAGCTCACTCTAAG +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLELSCPA*EVAHSK
Trigger: CTTAGAGTGAGCTACTTCTCAGGCCGGGCACGACAG...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR TCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGAGGGCTGGGGTGCCTCTaGCTTCACGATCGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGGLGCL*LHDRPP
Trigger: AGGGGGACGATCGTGAAGTCAGAGGCACCCCAGCCC...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR GCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTCCTCCATTGGGTAGATaGTGCTCTGGGCGATGGCCC +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETAPPLGR*CSGRWP
Trigger: GGGCCATCGCCCAGAGCAGCATCTACCCAATGGAGG...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGACCCCGTCACCGCGACTaGACGCCCAGGGTGATCTTC +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGPRHRD*TPRVIF
Trigger: GAAGATCACCCTGGGCGTGCAGTCGCGGTGACGGGG...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR GCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAGACAAGCCCTGGGCCTaGCAGCTCTCCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSDKPWA*QLSPPS
Trigger: GGAGGGTGGGGAGAGCTGGCAGGCCCAGGGCTTGTC...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGCTGCACTCCCAAGCATaGCCGAGAGCCCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRLHSQA*PRAPAI
Trigger: GATGGCTGGGGCTCTCGGGCATGCTTGGGAGTGCAG...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGCGCCCTCAAACATGGTaGTCCACTGCCCTCATGCCA +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLERPQTW*STALMP
Trigger: TGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCG...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAGTCCCGCTGCGCCCCTaGTGGGGTTGGACAGGAACC +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSVPLRP*WGWTGT
Trigger: GGTTCCTGTCCAACCCCAGCAGGGGCGCAGCGGGAC...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGAGCCCTTCCCCAACCTaGCAAAGGAAAGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLESPSPT*QRKGAR
Trigger: CCTGGCTCCTTTCCTTTGGCAGGTTGGGGAAGGGCT...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTCTGGTGGAATGGAAGTaGAACCGTGAGGTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTLVEWK*NREVAS
Trigger: ACTGGCGACCTCACGGTTGCACTTCCATTCCACCAG...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTACTGGAACTCGGTCTaGGCTTCCCCGATGACCGGC +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETAYWNSV*ASPMTG
Trigger: GCCGGTCATCGGGGAAGCCCAGACCGAGTTCCAGTA...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR CCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAGGGCCGTGCAGGTTCTaGATACGGCCCCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSGPCRF*IRPLPH
Trigger: GTGGGGCAGGGGCCGTATCCAGAACCTGCACGGCCC...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTGGCCAGGATCCTCCTaGCGCAGTCCAGCATTCCTG +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETAWPGSS*RSPAFL
Trigger: CAGGAATGCTGGACTGCGCCAGGAGGATCCTGGCCA...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR CCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTGCTGGCCACAGGTACTaGACATGGTGCCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETAAGHRY*TWCHRP
Trigger: TGGCCTGTGGCACCATGTCCAGTACCTGTGGCCAGC...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR CCA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTCAGCAGGACAAGCCCTaGGCCTGCCAGCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSQQDKP*ACQLSP
Trigger: TGGGGAGAGCTGGCAGGCCCAGGGCTTGTCCTGCTG...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR CCA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTCGAGGGGGTGGGATGTaGGCTGTAGCCCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSRGGGM*AVALLP
Trigger: TGGGAGGAGGGCTACAGCCCACATCCCACCCCCTCG...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCCCTTCACAGCCAAGTTaGCGTCAATGCTGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGPSQPS*RQCCRL
Trigger: CAACCTACAGCATTGACGCCAACTTGGCTGTGAAGG...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGCCGCTGCGCCCCTGCTaGGGTTGGACAGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: PGRPRDLTFHHGLWDWTRPLRPC*GWTGTP
Trigger: GGGGGTTCCTGTCCAACCCCAGCAGGGGCGCAGCGG...CCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGAAGTGGAATGTGGGGCTaGTCCCGCTGCGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGSGMWG*SRCAPA
Trigger: AGCAGGGGCGCAGCGGGACCAGCCCCACATTCCACT...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGGACACAAGTGGAATGTaGGGCTGGTCCCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRDTSGM*GWSRCA
Trigger: GGCGCAGCGGGACCAGCCCCACATTCCACTTGTGTC...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCCTCCTCCCATCCCACTaGGCGGGCTTGGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISLLPSH*AGLGRY
Trigger: GTACCTTCCCAAGCCCGCCCAGTGGGATGGGAGGAG...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCGTCATTCTGGTGGAATaGAAGTGCAACCGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGVILVE*KCNREV
Trigger: GACCTCACGGTTGCACTTCCATTCCACCAGAATGAC...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCTCTCCAGGCAGGGGCTaGGGTGCCTCTGACTTCACG +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISSPGRG*GASDFT
Trigger: CGTGAAGTCAGAGGCACCCCAGCCCCTGCCTGGAGA...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR TCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACACCCGCAGGGACTGCATaGTCTCCTGCGCGTCAATGC +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATPAGTA*SPARQC
Trigger: GCATTGACGCGCAGGAGATCATGCAGTCCCTGCGGG...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGGCTGTTCAGATATCTTaGCTCCCAAGTCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLEAVQIS*LPSPAG
Trigger: CCCTGCGGGACTTGGGAGTCAAGATATCTGAACAGC...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTGCCTCTCCTCCACTGTaGACTCATCCGGGACCGTTA +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETAASPPL*THPGPL
Trigger: TAACGGTCCCGGATGAGTTCACAGTGGAGGAGAGGC...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTCCTGCATCCGGGTCCTaGCTAGGGCCAGGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: LPRLPLEAQKSLICPACPPASGS*LGPGGS
Trigger: GCTACCCCCTGGCCCTAGTCAGGACCCGGATGCAGG...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACAGAGCCCGGAGCCTGCTaGCCCTGGACCCTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATEPGAC*PWTLRN
Trigger: ATTCCTTAGGGTCCAGGGTCAGCAGGCTCCGGGCTC...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCAGAGCCCGGAGCCTGCTaGCCCTGGACCCTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPEPGAC*PWTLRN
Trigger: ATTCCTTAGGGTCCAGGGTCAGCAGGCTCCGGGCTC...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCCTGTCCTTACACATGTaGGCCCGGAGCCTGCTGACC +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISLSLHM*ARSLLT
Trigger: GGTCAGCAGGCTCCGGGCTCACATGTGTAAGGACAG...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGCCTGGGAGGCCACGTaGCCTCACCTTTCATCATGG +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISAWEAT*PHLSSW
Trigger: CCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGC...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGGCCTGGGAGGCCACGTaGCCTCACCTTTCATCATGG +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKAWEAT*PHLSSW
Trigger: CCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGC...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGCAGCTCAGAGCACCATaGGCCCCAGCACTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLQLRAP*APALAF
Trigger: GAAGGCAAGTGCTGGGGCTCATGGTGCTCTGAGCTG...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGCAGCTCAGAGCACCATaGGCCCCAGCACTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRQLRAP*APALAF
Trigger: GAAGGCAAGTGCTGGGGCTCATGGTGCTCTGAGCTG...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCCCCCCAGTCAAACCCTaGAATCCTAAGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISPPVKP*NPKAGG
Trigger: GCCCCCAGCCTTAGGATTTCAGGGTTTGACTGGGGG...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCAATGGAAGTGCAACCGTaGGGTCGCCAGTTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPMEVQP*GRQLAG
Trigger: GCCGGCCAACTGGCGACCTCACGGTTGCACTTCCAT...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTTGACGTCGAGCGTCTaGAAGAGTCTCCACAGGCGC +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETALTSSV*KSLHRR
Trigger: GCGCCTGTGGAGACTCTTTCAGACGCTCGACGTCAA...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373068.6
CDS-3UTR TCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGGGGCTGGGGTGCCTCTaGCTTCACGATCGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGGLGCL*LHDRPP
Trigger: AGGGGGACGATCGTGAAGTCAGAGGCACCCCAGCCC...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR GCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTTGGCGGCCTGCTGGGTaGTCCACTGCCCTCACCACC +
Preference number: 4 (lower is better)
Translates to: LPRLPLEAQKSLICPACPWRPAG*STALTT
Trigger: GGTGGTGAGGGCAGTGGAGCACCCAGCAGGCCGCCA...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR GCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTCACCACATCCCCGTCTaGCTCTCCTCCACTGTGAAC +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETAHHIPV*LSSTVN
Trigger: GTTCACAGTGGAGGAGAGGCAGACGGGGATGTGGTG...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTCACCACATCCCCGTCTaGCTCTCCTCCACTGTGAAC +
Preference number: 4 (lower is better)
Translates to: QNEMAAHPRLRPRISESTHHIPV*LSSTVN
Trigger: GTTCACAGTGGAGGAGAGGCAGACGGGGATGTGGTG...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTCGGGAGGCATGGACCTaGATGAGCACCTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPREAWT*MSTLSL
Trigger: CAGGCTCAAGGTGCTCATGCAGGTCCATGCCTCCCG...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTTGCCCATGTTGTTGCTaGGGGAGGCATGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: QNEMAAHPRLRPRISESTCPCCC*GRHGPA
Trigger: TGCAGGTCCATGCCTCCCGCAGCAACAACATGGGCA...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTCGATGCCCATGTTGTTaGTGCGGGAGGCATGGACCT +
Preference number: 4 (lower is better)
Translates to: QNEMAAHPRLRPRISESTRCPCC*CGRHGP
Trigger: AGGTCCATGCCTCCCGCAGCAACAACATGGGCATCG...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTCCCTGCCAAGGACCCTaGCACAAGCCTCTCGTGAAT +
Preference number: 4 (lower is better)
Translates to: QNEMAAHPRLRPRISESTPCQGP*HKPLVN
Trigger: ATTCACGAGAGGCTTGTGGCAGGGTCCTTGGCAGGG...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAACTGGGCGATGGCCCCTaGCAAGGACCCTGCCACAAG +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKLGDGP*QGPCHK
Trigger: CTTGTGGCAGGGTCCTTGGCAGGGGCCATCGCCCAG...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGCCATTGGGTAGATGCTaGTCTGGGCGATGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRPLGRC*SGRWPL
Trigger: CAGGGGCCATCGCCCAGAGCAGCATCTACCCAATGG...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCCCATTGGGTAGATGCTaGTCTGGGCGATGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISPLGRC*SGRWPL
Trigger: CAGGGGCCATCGCCCAGAGCAGCATCTACCCAATGG...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGCCTCCATTGGGTAGATaGTGCTCTGGGCGATGGCCC +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLPPLGR*CSGRWP
Trigger: GGGCCATCGCCCAGAGCAGCATCTACCCAATGGAGG...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGGTCCGCGCTGTTCACTaGATAGTGCTGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRVRAVH*IVLQPG
Trigger: GCCTGGCTGCAGCACTATGCAGTGAACAGCGCGGAC...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR GCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCACCCCGTCACCGCGACTaGACGCCCAGGGTGATCTTC +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSPRHRD*TPRVIF
Trigger: GAAGATCACCCTGGGCGTGCAGTCGCGGTGACGGGG...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGCTGCACACCCCAGGCTaGGGCCCAGGATCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGLHTPG*GPGSAS
Trigger: ACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAG...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTACCAACAGGAGGGTCTaGTGGGGTCAGCAGGACAAG +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETATNRRV*WGQQDK
Trigger: CTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGT...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR GCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTGCTCCACTGCCCTCATaGCACAGTGGGGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPAPLPS*HSGDSE
Trigger: CTCACTGTCCCCACTGTGGCATGAGGGCAGTGGAGC...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTAACATGGTGCTCCACTaGCCTCATGCCACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QNEMAAHPRLRPRISESTNMVLH*PHATVG
Trigger: CCCCACTGTGGCATGAGGGCAGTGGAGCACCATGTT...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTGAAAGGAGCCAGGGCTaGTGCCTTCTGGCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETAERSQG*CLLAAF
Trigger: AAAAGCGGCCAGAAGGCAGCAGCCCTGGCTCCTTTC...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACTCTAAGGGAGGCTTaGCAGGCTGCCGGCAATAAG +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLETLREA*QAAGNK
Trigger: CTTATTGCCGGCAGCCTGGCAAGCCTCCCTTAGAGT...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR GCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTGCTGGAAGCTCTGCATaGAGGGGCGGTTTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETAAGSSA*RGGFLL
Trigger: AAGCAGGAAACCGCCCCTGCATGCAGAGCTTCCAGC...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR CCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGTGCTGCTCTGGGCGATaGCCCCTGCCAAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGCCSGR*PLPRTL
Trigger: CAGGGTCCTTGGCAGGGGCCATCGCCCAGAGCAGCA...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGTGGCCAGGATCCTCCTaGCGCAGTCCAGCATTCCTG +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKWPGSS*RSPAFL
Trigger: CAGGAATGCTGGACTGCGCCAGGAGGATCCTGGCCA...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTGGCCAGGATCCTCCTaGCGCAGTCCAGCATTCCTG +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLWPGSS*RSPAFL
Trigger: CAGGAATGCTGGACTGCGCCAGGAGGATCCTGGCCA...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGGCTGGCCACAGGTACTaGACATGGTGCCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKAGHRY*TWCHRP
Trigger: TGGCCTGTGGCACCATGTCCAGTACCTGTGGCCAGC...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CCGAAGGCCCCCTCGGTCCGCAGGATATGTTTGAAGAGGCTGCTCATGGTCACCGCTGGCCACAGGTACTaGACATGGTGCCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: PKAPSVRRICLKRLLMVTAGHRY*TWCHRP
Trigger: TGGCCTGTGGCACCATGTCCAGTACCTGTGGCCAGC...GGTGACCATGAGCAGCCTCTTCAAACATATCCTGCGGACCGAGGGGGCCTTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR CCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGAACAGGAGGGTCTGCTaGGGTCAGCAGGACAAGCCC +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLNRRVC*GQQDKP
Trigger: GGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTT...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGAACAGGAGGGTCTGCTaGGGTCAGCAGGACAAGCCC +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKNRRVC*GQQDKP
Trigger: GGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTT...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAAGAGGGCAGGGGCCGTaGCCAACAGCTGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSRGQGP*PTAGCK
Trigger: CTTGCAGCCAGCTGTTGGCCACGGCCCCTGCCCTCT...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGGATTGGACGAGGGGGTaGGATGTGGGCTGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKDWTRG*DVGCSP
Trigger: AGGGCTACAGCCCACATCCCACCCCCTCGTCCAATC...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTTCCCTCGTCTTCCTCTaGAAGCACAGAAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTSLVFL*KHRSRS
Trigger: TGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGA...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAAAGTGGAATGTGGGGCTaGTCCCGCTGCGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKSGMWG*SRCAPA
Trigger: AGCAGGGGCGCAGCGGGACCAGCCCCACATTCCACT...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAAGGGCAGCAGAAGGCTaGGAGGGACGGAGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSRAAEG*EGRSQS
Trigger: GGACTGGCTCCGTCCCTCCCAGCCTTCTGCTGCCCT...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGCTGGGAGGACGGGCCTaGGGTTCTCAGGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGLGGRA*GSQAGS
Trigger: GCTTCCAGCCTGAGAACCCCAGGCCCGTCCTCCCAG...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
3UTR CAA 72 bp TGGAAGTGCAACCGTGAGGTCGCCAGTTGGCCGGCATaGTTAAGCAAGGGCAGCAGAAGGCTGGGAGGGACG +
Preference number: 4 (lower is better)
Translates to: WKCNREVASWPA*LSKGSRRLGGT
Trigger: CGTCCCTCCCAGCCTTCTGCTGCCCTTGCTTAACAATGCCGGCCAACTGGCGACCTCACGGTTGCACTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
CDS-3UTR TCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAACCTGCCAACAGCCAATaGACACAGAGCCCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKPANSQ*TQSPGE
Trigger: CTCCCCCGGGCTCTGTGTTCATTGGCTGTTGGCAGG...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR TCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTGCTTCCAGTAGAGGATaGTCTCGGGGATGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTASSRG*SRGCFP
Trigger: TGGAAAACATCCCCGAGATCATCCTCTACTGGAAGC...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTATTGCCCCGCCAGAGTaGCCTGGCCCCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: LPRLPLEAQKSLICPACPIAPPE*PGPSFS
Trigger: CGAGAAGGAGGGGCCAGGTCACTCTGGCGGGGCAAT...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTGCAGTCCAGCATTCCTaGGTACTGGCCTGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPAVQHS*VLACLP
Trigger: CGGAAGACAGGCCAGTACTCAGGAATGCTGGACTGC...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGGCACATTCACAGAATaGGATGGCTGCACACCCCAG +
Preference number: 4 (lower is better)
Translates to: QNEMAAHPRLRPRISESTGTFTE*DGCTPQ
Trigger: CTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCC...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR TCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGACTGTCCTTACACATGTaGGCCCGGAGCCTGCTGACC +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGLSLHM*ARSLLT
Trigger: GGTCAGCAGGCTCCGGGCTCACATGTGTAAGGACAG...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACAGCCTGGGAGGCCACGTaGCCTCACCTTTCATCATGG +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATAWEAT*PHLSSW
Trigger: CCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGC...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTATAGGTTCCAAGCAGTaGCACAAGTGGAATGTGGGG +
Preference number: 4 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTIGSKQ*HKWNVG
Trigger: CCCCACATTCCACTTGTGTCACTGCTTGGAACCTAT...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACATTCTCTGGACAGATGTaGCTGCAGCGGCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATFSGQM*LQRPKA
Trigger: GGCCTTGGGCCGCTGCAGTCACATCTGTCCAGAGAA...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGAAGTTCCCTAAATGCTaGCGGTCCCGGGAAACTTGC +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLEKFPKC*RSRETC
Trigger: GCAAGTTTCCCGGGACCGGCAGCATTTAGGGAACTT...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR GCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCAAGTCCCGCAGGGACTaGATGATCTCCTGCGCGTCA +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISKSRRD*MISCAS
Trigger: TGACGCGCAGGAGATCATGCAGTCCCTGCGGGACTT...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGAAGTCCCGCAGGGACTaGATGATCTCCTGCGCGTCA +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLKSRRD*MISCAS
Trigger: TGACGCGCAGGAGATCATGCAGTCCCTGCGGGACTT...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGCACCACATCCCCGTCTaGCTCTCCTCCACTGTGAAC +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRHHIPV*LSSTVN
Trigger: GTTCACAGTGGAGGAGAGGCAGACGGGGATGTGGTG...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATCCCTGCCCCACCTCCTaGCACCAGGTGTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHPCPTS*HQVSPP
Trigger: TGGTGGAGACACCTGGTGGCAGGAGGTGGGGCAGGG...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCACGGGAGGCATGGACCTaGATGAGCACCTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPREAWT*MSTLSL
Trigger: CAGGCTCAAGGTGCTCATGCAGGTCCATGCCTCCCG...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGCGATGCCCATGTTGTTaGTGCGGGAGGCATGGACCT +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLRCPCC*CGRHGP
Trigger: AGGTCCATGCCTCCCGCAGCAACAACATGGGCATCG...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATCTGGGCGATGGCCCCTaGCAAGGACCCTGCCACAAG +
Preference number: 4 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHLGDGP*QGPCHK
Trigger: CTTGTGGCAGGGTCCTTGGCAGGGGCCATCGCCCAG...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGAGCGTCTCGTAGACTaGAAGGTCGATGCCGGCATA +
Preference number: 4 (lower is better)
Translates to: QNEMAAHPRLRPRISESTERLVD*KVDAGI
Trigger: TATGCCGGCATCGACCTTGCAGTCTACGAGACGCTC...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR GCA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCAGTCCGCGCTGTTCACTaGATAGTGCTGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPVRAVH*IVLQPG
Trigger: GCCTGGCTGCAGCACTATGCAGTGAACAGCGCGGAC...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp TACAGCCCGAAGGCCCCCTCGGTCCGCAGGATATGTTTGAAGAGGCTGCTCATGGTCCGCGCTGTTCACTaGATAGTGCTGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: YSPKAPSVRRICLKRLLMVRAVH*IVLQPG
Trigger: GCCTGGCTGCAGCACTATGCAGTGAACAGCGCGGAC...CATGAGCAGCCTCTTCAAACATATCCTGCGGACCGAGGGGGCCTTCGGGCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR GCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTCTGCACACCCCAGGCTaGGGCCCAGGATCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: LPRLPLEAQKSLICPACPLHTPG*GPGSAS
Trigger: ACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAG...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAGACAAGCCCTGGGCCTaGCAGCTCTCCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQDKPWA*QLSPPS
Trigger: GGAGGGTGGGGAGAGCTGGCAGGCCCAGGGCTTGTC...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGACCAACAGGAGGGTCTaGTGGGGTCAGCAGGACAAG +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRTNRRV*WGQQDK
Trigger: CTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGT...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR GCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAACTGCACTCCCAAGCATaGCCGAGAGCCCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKLHSQA*PRAPAI
Trigger: GATGGCTGGGGCTCTCGGGCATGCTTGGGAGTGCAG...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCAGCTCCACTGCCCTCATaGCACAGTGGGGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPAPLPS*HSGDSE
Trigger: CTCACTGTCCCCACTGTGGCATGAGGGCAGTGGAGC...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGAACATGGTGCTCCACTaGCCTCATGCCACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRNMVLH*PHATVG
Trigger: CCCCACTGTGGCATGAGGGCAGTGGAGCACCATGTT...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTAGTCAGCCAAGCTCCTaGTCCCTCGTCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPSQPSS*SLVFLW
Trigger: CCAGAGGAAGACGAGGGAGCAGGAGCTTGGCTGACT...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCAGCCCTTCCCCAACCTaGCAAAGGAAAGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISSPSPT*QRKGAR
Trigger: CCTGGCTCCTTTCCTTTGGCAGGTTGGGGAAGGGCT...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGAGCCCTTCCCCAACCTaGCAAAGGAAAGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLSPSPT*QRKGAR
Trigger: CCTGGCTCCTTTCCTTTGGCAGGTTGGGGAAGGGCT...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTCTCTGGCTACACAGCTaGTGGGAGGACGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPRLPLEAQKSLICPACPLWLHS*WEDGPG
Trigger: CCCAGGCCCGTCCTCCCAGCAGCTGTGTAGCCAGAG...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR GCA 90 bp TACAGCCCGAAGGCCCCCTCGGTCCGCAGGATATGTTTGAAGAGGCTGCTCATGGCCTTACCTTGCGCCTaGATCCGGGTCCTGACTAGG +
Preference number: 4 (lower is better)
Translates to: YSPKAPSVRRICLKRLLMALPCA*IRVLTR
Trigger: CCTAGTCAGGACCCGGATGCAGGCGCAAGGTAAGGC...CATGAGCAGCCTCTTCAAACATATCCTGCGGACCGAGGGGGCCTTCGGGCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR CCA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTGCCCGGGGGAGAAGGTaGCATCAGGTTGCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSARGRR*HQVAQV
Trigger: CACTTGAGCAACCTGATGCCACCTTCTCCCCCGGGC...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR CCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGTTGCTGCGGGAGGCATaGACCTGCATGAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKLLREA*TCMSTL
Trigger: CAAGGTGCTCATGCAGGTCCATGCCTCCCGCAGCAA...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGACCCGCCAGAGTGACCTaGCCCCTCCTTCTCGAATCA +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGPARVT*PLLLES
Trigger: TGATTCGAGAAGGAGGGGCCAGGTCACTCTGGCGGG...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTTGCTGCTCTGGGCGATaGCCCCTGCCAAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: LPRLPLEAQKSLICPACPCCSGR*PLPRTL
Trigger: CAGGGTCCTTGGCAGGGGCCATCGCCCAGAGCAGCA...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGAGCATTCCTGAGTACTaGCCTGTCTTCCGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRSIPEY*PVFRSA
Trigger: GGCGCTGCGGAAGACAGGCCAGTACTCAGGAATGCT...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR CCA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCATGGCCAGGATCCTCCTaGCGCAGTCCAGCATTCCTG +
Preference number: 4 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPWPGSS*RSPAFL
Trigger: CAGGAATGCTGGACTGCGCCAGGAGGATCCTGGCCA...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GTACAGCCCGAAGGCCCCCTCGGTCCGCAGGATATGTTTGAAGAGGCTGCTCATAACAGGAGGGTCTGCTaGGGTCAGCAGGACAAGCCC +
Preference number: 4 (lower is better)
Translates to: VQPEGPLGPQDMFEEAAHNRRVC*GQQDKP
Trigger: GGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTT...ATGAGCAGCCTCTTCAAACATATCCTGCGGACCGAGGGGGCCTTCGGGCTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR CCA 90 bp CCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGAGAGGGCAGGGGCCGTaGCCAACAGCTGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PGRPRDLTFHHGLWDWTRRGQGP*PTAGCK
Trigger: CTTGCAGCCAGCTGTTGGCCACGGCCCCTGCCCTCT...CCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCAGATTGGACGAGGGGGTaGGATGTGGGCTGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPDWTRG*DVGCSP
Trigger: AGGGCTACAGCCCACATCCCACCCCCTCGTCCAATC...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTCTTCGCCCTCAAACATaGTGCTCCACTGCCCTCATG +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETALRPQT*CSTALM
Trigger: CATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAG...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTCCGCTGCGCCCCTGCTaGGGTTGGACAGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGIPLRPC*GWTGTP
Trigger: GGGGGTTCCTGTCCAACCCCAGCAGGGGCGCAGCGG...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAACTCCTCCCATCCCACTaGGCGGGCTTGGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKLLPSH*AGLGRY
Trigger: GTACCTTCCCAAGCCCGCCCAGTGGGATGGGAGGAG...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGAGGGCAGCAGAAGGCTaGGAGGGACGGAGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PGRPRDLTFHHGLWDWTRRAAEG*EGRSQS
Trigger: GGACTGGCTCCGTCCCTCCCAGCCTTCTGCTGCCCT...CCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGTGGCTACACAGCTGCTaGGAGGACGGGCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGWLHSC*EDGPGV
Trigger: AACCCCAGGCCCGTCCTCCCAGCAGCTGTGTAGCCA...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR CCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTAGTACCAACGCTCTCTaGCTACACAGCTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETASTNAL*LHSCWE
Trigger: CTCCCAGCAGCTGTGTAGCCAGAGAGCGTTGGTACT...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR CCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAGATCGTCCCCCTCTCTaGAGCCGTGGCACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQDRPPL*SRGTQP
Trigger: GGGCTGGGTGCCACGGCTCCAGAGAGGGGGACGATC...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR CCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGAAAAAGCTTGCCATCTaGTCTCTCCAGGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLEKKLAI*SLQAGA
Trigger: AGCCCCTGCCTGGAGAGACCAGATGGCAAGCTTTTT...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR TCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGGCTGTTCAGATATCTTaGCTCCCAAGTCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKAVQIS*LPSPAG
Trigger: CCCTGCGGGACTTGGGAGTCAAGATATCTGAACAGC...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTGCAGTCCAGCATTCCTaGGTACTGGCCTGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSAVQHS*VLACLP
Trigger: CGGAAGACAGGCCAGTACTCAGGAATGCTGGACTGC...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR TCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGGCAGCCAGGCATTCTTaGGCGTCTCGTAGACTGCAA +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLAARHS*ASRRLQ
Trigger: TTGCAGTCTACGAGACGCTCAAGAATGCCTGGCTGC...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGCAGCCAGGCATTCTTaGGCGTCTCGTAGACTGCAA +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISAARHS*ASRRLQ
Trigger: TTGCAGTCTACGAGACGCTCAAGAATGCCTGGCTGC...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR TCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTGGCACATTCACAGAATaGGATGGCTGCACACCCCAG +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPGTFTE*DGCTPQ
Trigger: CTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCC...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGAGCCCGGAGCCTGCTaGCCCTGGACCCTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: PGRPRDLTFHHGLWDWTREPGAC*PWTLRN
Trigger: ATTCCTTAGGGTCCAGGGTCAGCAGGCTCCGGGCTC...CCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGCGTCAGAACAGACTCTaGGCAGTCAGCCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLRQNRL*AVSQAP
Trigger: AGGAGCTTGGCTGACTGCTCAGAGTCTGTTCTGACG...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCCGTCAGAACAGACTCTaGGCAGTCAGCCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISRQNRL*AVSQAP
Trigger: AGGAGCTTGGCTGACTGCTCAGAGTCTGTTCTGACG...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATTCTCTGGACAGATGTaGCTGCAGCGGCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKFSGQM*LQRPKA
Trigger: GGCCTTGGGCCGCTGCAGTCACATCTGTCCAGAGAA...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCACCCCCAGTCAAACCCTaGAATCCTAAGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSPPVKP*NPKAGG
Trigger: GCCCCCAGCCTTAGGATTTCAGGGTTTGACTGGGGG...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGCACCTTCAAGGTTATTaGGGTTCCTCCCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLEHLQGY*GSSLSL
Trigger: GAGAGAGAGGGAGGAACCTCAATAACCTTGAAGGTG...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACACTGTCGTGCCCGGCCTaGGAAGTAGCTCACTCTAAG +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATLSCPA*EVAHSK
Trigger: CTTAGAGTGAGCTACTTCTCAGGCCGGGCACGACAG...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR TCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGTTTTATCCATGTAGGTaGCAGGGCCCCAGAAATGGC +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLEFYPCR*QGPRNG
Trigger: GCCATTTCTGGGGCCCTGTCACCTACATGGATAAAA...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373066.9
CDS-3UTR GCA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTTCCCACGGCAAGTCCTaGCAACAGCCAATGAACACA +
Preference number: 4 (lower is better)
Translates to: QNEMAAHPRLRPRISESTSHGKS*QQPMNT
Trigger: TGTGTTCATTGGCTGTTGGCAGGACTTGCCGTGGGA...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR GCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGAAAGTCCCGCAGGGACTaGATGATCTCCTGCGCGTCA +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGKSRRD*MISCAS
Trigger: TGACGCGCAGGAGATCATGCAGTCCCTGCGGGACTT...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACACACCACATCCCCGTCTaGCTCTCCTCCACTGTGAAC +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATHHIPV*LSSTVN
Trigger: GTTCACAGTGGAGGAGAGGCAGACGGGGATGTGGTG...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCATGCCCATGTTGTTGCTaGGGGAGGCATGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPCPCCC*GRHGPA
Trigger: TGCAGGTCCATGCCTCCCGCAGCAACAACATGGGCA...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTTGCCCATGTTGTTGCTaGGGGAGGCATGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSCPCCC*GRHGPA
Trigger: TGCAGGTCCATGCCTCCCGCAGCAACAACATGGGCA...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACATGCCCATGTTGTTGCTaGGGGAGGCATGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATCPCCC*GRHGPA
Trigger: TGCAGGTCCATGCCTCCCGCAGCAACAACATGGGCA...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGACCCTGCCAAGGACCCTaGCACAAGCCTCTCGTGAAT +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGPCQGP*HKPLVN
Trigger: ATTCACGAGAGGCTTGTGGCAGGGTCCTTGGCAGGG...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCACCATTGGGTAGATGCTaGTCTGGGCGATGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSPLGRC*SGRWPL
Trigger: CAGGGGCCATCGCCCAGAGCAGCATCTACCCAATGG...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTGAGCGTCTCGTAGACTaGAAGGTCGATGCCGGCATA +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPERLVD*KVDAGI
Trigger: TATGCCGGCATCGACCTTGCAGTCTACGAGACGCTC...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGCGTCTCGTAGACTaGAAGGTCGATGCCGGCATA +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISERLVD*KVDAGI
Trigger: TATGCCGGCATCGACCTTGCAGTCTACGAGACGCTC...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR GCA 90 bp CTGTACAGCCCGAAGGCCCCCTCGGTCCGCAGGATATGTTTGAAGAGGCTGCTCGAGCGTCTCGTAGACTaGAAGGTCGATGCCGGCATA +
Preference number: 4 (lower is better)
Translates to: LYSPKAPSVRRICLKRLLERLVD*KVDAGI
Trigger: TATGCCGGCATCGACCTTGCAGTCTACGAGACGCTC...GAGCAGCCTCTTCAAACATATCCTGCGGACCGAGGGGGCCTTCGGGCTGTACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR GCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAGTCCGCGCTGTTCACTaGATAGTGCTGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSVRAVH*IVLQPG
Trigger: GCCTGGCTGCAGCACTATGCAGTGAACAGCGCGGAC...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGAATAGAGGCTTGCGCCTaGATCCGGGTCCTGACTAGG +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGIEACA*IRVLTR
Trigger: CCTAGTCAGGACCCGGATGCAGGCGCAAGCCTCTAT...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACAACCAACAGGAGGGTCTaGTGGGGTCAGCAGGACAAG +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATTNRRV*WGQQDK
Trigger: CTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGT...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGTGGCCAACAGCTGGCTaGAAGGGTGAAATGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLEWPTAG*KGEMEE
Trigger: TTCTTCCATTTCACCCTTGCAGCCAGCTGTTGGCCA...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTCTGCACTCCCAAGCATaGCCGAGAGCCCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: LPRLPLEAQKSLICPACPLHSQA*PRAPAI
Trigger: GATGGCTGGGGCTCTCGGGCATGCTTGGGAGTGCAG...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAATGAGCCCCAGCACTTaGCTTCTGTGCAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSMSPST*LLCSQA
Trigger: GGCCTGGCTGCACAGAAGGCAAGTGCTGGGGCTCAT...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACACGCCCTCAAACATGGTaGTCCACTGCCCTCATGCCA +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATRPQTW*STALMP
Trigger: TGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCG...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTCGCCCTCAAACATGGTaGTCCACTGCCCTCATGCCA +
Preference number: 4 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSRPQTW*STALMP
Trigger: TGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCG...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGCTGGTGGAATGGAAGTaGAACCGTGAGGTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLLVEWK*NREVAS
Trigger: ACTGGCGACCTCACGGTTGCACTTCCATTCCACCAG...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGCTGGTGGAATGGAAGTaGAACCGTGAGGTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKLVEWK*NREVAS
Trigger: ACTGGCGACCTCACGGTTGCACTTCCATTCCACCAG...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCATCAGGCTGGAAGCTCTaGATGCAGGGGCGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPSGWKL*MQGRFP
Trigger: AGGAAACCGCCCCTGCATGCAGAGCTTCCAGCCTGA...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTCGGGTCTTCAGGACCTaGATGAGCACCTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSRVFRT*MSTLSL
Trigger: CAGGCTCAAGGTGCTCATGCAGGTCCTGAAGACCCG...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR GCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGAGCCCTCAATAGAGGCTaGAGGATGGAGGCCACCAGT +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGALNRG*RMEATS
Trigger: ACTGGTGGCCTCCATCCTGCAGCCTCTATTGAGGGC...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR CCA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTTTGCTGCGGGAGGCATaGACCTGCATGAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSLLREA*TCMSTL
Trigger: CAAGGTGCTCATGCAGGTCCATGCCTCCCGCAGCAA...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTCTTCAGGACCTCCATTaGGTAGATGCTGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPLQDLH*VDAALG
Trigger: GCCCAGAGCAGCATCTACCCAATGGAGGTCCTGAAG...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTATTCACAGAATGAGATaGCTGCACACCCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETAIHRMR*LHTPGC
Trigger: GCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAAT...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR CCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGCTCCAAGCTCGCTATTaGCAGGCACTGCAGAAAATG +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLELQARY*QALQKM
Trigger: CATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAG...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTCATGGATTATGGGATTaGACGAGGGGGTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETAHGLWD*TRGWDV
Trigger: CACATCCCACCCCCTCGTCCAATCCCATAATCCATG...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGGTCAATGCTGTAGGTTaGGAAGTCAGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLVNAVG*EVRPGR
Trigger: CCTCCCAGGCCTGACTTCCCAACCTACAGCATTGAC...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTCCCTCGTCTTCCTCTaGAAGCACAGAAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETASLVFL*KHRSRS
Trigger: TGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGA...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCCCGCTGCGCCCCTGCTaGGGTTGGACAGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSPLRPC*GWTGTP
Trigger: GGGGGTTCCTGTCCAACCCCAGCAGGGGCGCAGCGG...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGCCCACTGGGCGGGCTTaGGAAGGTACAATCAACCAT +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKPTGRA*EGTINH
Trigger: ATGGTTGATTGTACCTTCCCAAGCCCGCCCAGTGGG...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTCGTGAGGTCGCCAGTTaGCCGGCATTGTTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPREVAS*PALLSK
Trigger: CTTGCTTAACAATGCCGGCCAACTGGCGACCTCACG...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAACTGGGAGGACGGGCCTaGGGTTCTCAGGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQLGGRA*GSQAGS
Trigger: GCTTCCAGCCTGAGAACCCCAGGCCCGTCCTCCCAG...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR CCA 90 bp CCCTCGGTCCGCAGGATATGTTTGAAGAGGCTGCTCATGGTCACCTCCGGAGCGATAGAGGCTGCAGGATaGAGGCCACCAGTCAGATGC +
Preference number: 4 (lower is better)
Translates to: PSVRRICLKRLLMVTSGAIEAAG*RPPVRC
Trigger: GCATCTGACTGGTGGCCTCCATCCTGCAGCCTCTAT...CGCTCCGGAGGTGACCATGAGCAGCCTCTTCAAACATATCCTGCGGACCGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR TCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGAGCAGCCAGGCATTCTTaGGCGTCTCGTAGACTGCAA +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGAARHS*ASRRLQ
Trigger: TTGCAGTCTACGAGACGCTCAAGAATGCCTGGCTGC...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR TCA 90 bp CCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGCCTGGGAGGCCACGTaGCCTCACCTTTCATCATGG +
Preference number: 4 (lower is better)
Translates to: PGRPRDLTFHHGLWDWTRAWEAT*PHLSSW
Trigger: CCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGC...CCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAGGGCTCAGATGCCAGTaGCCACAAGGCCAGATCCTT +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSGLRCQ*PQGQIL
Trigger: AAGGATCTGGCCTTGTGGTCACTGGCATCTGAGCCC...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTATAGGTTCCAAGCAGTaGCACAAGTGGAATGTGGGG +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETAIGSKQ*HKWNVG
Trigger: CCCCACATTCCACTTGTGTCACTGCTTGGAACCTAT...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGGGCACCTCACTGCCTTaGCATTCAGAAAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: ALPTLPAGASRVFTAWLEGTSLP*HSEKSE
Trigger: TTCACTCTTTTCTGAATGTCAAGGCAGTGAGGTGCC...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAATGGAAGTGCAACCGTaGGGTCGCCAGTTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQMEVQP*GRQLAG
Trigger: GCCGGCCAACTGGCGACCTCACGGTTGCACTTCCAT...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCATCTTTGCATCCTATTaGAGATTTCCTCATCAGGTC +
Preference number: 4 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGIFASY*RFPHQV
Trigger: GACCTGATGAGGAAATCTTCAATAGGATGCAAAGAT...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTCCTCCAAACGCCTCTaGTGGCGACTGTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETASSKRL*WRLFTF
Trigger: AAAAGTGAACAGTCGCCATCAGAGGCGTTTGGAGGA...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR GCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGACGGTCCCGGGAAACTTaGATAAGACAAGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGRSRET*IRQAWP
Trigger: AGGCCAGGCTTGTCTTATGCAAGTTTCCCGGGACCG...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR GCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAAGCATGTTGGCGGCCTaGTGGGTGCTCCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQSMLAA*WVLHCP
Trigger: AGGGCAGTGGAGCACCCAGCAGGCCGCCAACATGCT...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR GCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGGACTGCATGATCTCCTaGGCGTCAATGCGTCCATCA +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRDCMIS*ASMRPS
Trigger: TGATGGACGCATTGACGCGCAGGAGATCATGCAGTC...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGACTGCATGATCTCCTaGGCGTCAATGCGTCCATCA +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISDCMIS*ASMRPS
Trigger: TGATGGACGCATTGACGCGCAGGAGATCATGCAGTC...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAAAAGTCCCGCAGGGACTaGATGATCTCCTGCGCGTCA +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKKSRRD*MISCAS
Trigger: TGACGCGCAGGAGATCATGCAGTCCCTGCGGGACTT...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATCGGGAGGCATGGACCTaGATGAGCACCTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHREAWT*MSTLSL
Trigger: CAGGCTCAAGGTGCTCATGCAGGTCCATGCCTCCCG...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGCCTCCATTGGGTAGATaGTGCTCTGGGCGATGGCCC +
Preference number: 4 (lower is better)
Translates to: PGRPRDLTFHHGLWDWTRPPLGR*CSGRWP
Trigger: GGGCCATCGCCCAGAGCAGCATCTACCCAATGGAGG...CCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAATAGAGGCTTGCGCCTaGATCCGGGTCCTGACTAGG +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSIEACA*IRVLTR
Trigger: CCTAGTCAGGACCCGGATGCAGGCGCAAGCCTCTAT...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTCTGGACCCTAAGGAATaGCTGTGGTCTTCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPLDPKE*LWSSLE
Trigger: TTCCAGCGAAGACCACAGGCATTCCTTAGGGTCCAG...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGCTGGACCCTAAGGAATaGCTGTGGTCTTCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRLDPKE*LWSSLE
Trigger: TTCCAGCGAAGACCACAGGCATTCCTTAGGGTCCAG...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGAGTCAGCCAAGCTCCTaGTCCCTCGTCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGSQPSS*SLVFLW
Trigger: CCAGAGGAAGACGAGGGAGCAGGAGCTTGGCTGACT...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAAGAAAGGAGCCAGGGCTaGTGCCTTCTGGCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKERSQG*CLLAAF
Trigger: AAAAGCGGCCAGAAGGCAGCAGCCCTGGCTCCTTTC...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAAAGCCCTTCCCCAACCTaGCAAAGGAAAGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKSPSPT*QRKGAR
Trigger: CCTGGCTCCTTTCCTTTGGCAGGTTGGGGAAGGGCT...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGAACTCTAAGGGAGGCTTaGCAGGCTGCCGGCAATAAG +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGTLREA*QAAGNK
Trigger: CTTATTGCCGGCAGCCTGGCAAGCCTCCCTTAGAGT...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR GCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGTCAGGCTGGAAGCTCTaGATGCAGGGGCGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGSGWKL*MQGRFP
Trigger: AGGAAACCGCCCCTGCATGCAGAGCTTCCAGCCTGA...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR CCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATCCACTGGCGGTAGGTaGAGAATTCCTGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKSTGGR*RIPGRG
Trigger: TCCCCTCCCAGGAATTCTCCACCTACCGCCAGTGGA...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR CCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACACTTCAGGACCTCCATTaGGTAGATGCTGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATLQDLH*VDAALG
Trigger: GCCCAGAGCAGCATCTACCCAATGGAGGTCCTGAAG...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGAGCATTCCTGAGTACTaGCCTGTCTTCCGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGSIPEY*PVFRSA
Trigger: GGCGCTGCGGAAGACAGGCCAGTACTCAGGAATGCT...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GATATGTTTGAAGAGGCTGCTCATGGTCACCTCCGGAGCGCCCTCAATAGAGGCTGGCCAGGATCCTCCTaGCGCAGTCCAGCATTCCTG +
Preference number: 4 (lower is better)
Translates to: DMFEEAAHGHLRSALNRGWPGSS*RSPAFL
Trigger: CAGGAATGCTGGACTGCGCCAGGAGGATCCTGGCCA...GCCTCTATTGAGGGCGCTCCGGAGGTGACCATGAGCAGCCTCTTCAAACATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR CCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGATTCACAGAATGAGATaGCTGCACACCCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKIHRMR*LHTPGC
Trigger: GCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAAT...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGAACAGGAGGGTCTGCTaGGGTCAGCAGGACAAGCCC +
Preference number: 4 (lower is better)
Translates to: PGRPRDLTFHHGLWDWTRNRRVC*GQQDKP
Trigger: GGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTT...CCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGCATGGATTATGGGATTaGACGAGGGGGTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLHGLWD*TRGWDV
Trigger: CACATCCCACCCCCTCGTCCAATCCCATAATCCATG...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGCATGGATTATGGGATTaGACGAGGGGGTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRHGLWD*TRGWDV
Trigger: CACATCCCACCCCCTCGTCCAATCCCATAATCCATG...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACACCCACTGGGCGGGCTTaGGAAGGTACAATCAACCAT +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATPTGRA*EGTINH
Trigger: ATGGTTGATTGTACCTTCCCAAGCCCGCCCAGTGGG...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTGTCATTCTGGTGGAATaGAAGTGCAACCGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETAVILVE*KCNREV
Trigger: GACCTCACGGTTGCACTTCCATTCCACCAGAATGAC...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGACAGGGCCCCAGAAATaGCCCGTTCGTATTCTCTTG +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKTGPQK*PVRILL
Trigger: CAAGAGAATACGAACGGGCCATTTCTGGGGCCCTGT...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373066.9
CDS-3UTR TCA 90 bp AGATATCTTGACTCCCAAGTCCCGCAGGGACTGCATGATCTCCTGCGCGTCAATTCTGGGCTTCCCCGATaGCCGGCACATACAGGCACA +
Preference number: 4 (lower is better)
Translates to: RYLDSQVPQGLHDLLRVNSGLPR*PAHTGT
Trigger: TGTGCCTGTATGTGCCGGTCATCGGGGAAGCCCAGA...ATTGACGCGCAGGAGATCATGCAGTCCCTGCGGGACTTGGGAGTCAAGATATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR TCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTGCTTCCAGTAGAGGATaGTCTCGGGGATGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPASSRG*SRGCFP
Trigger: TGGAAAACATCCCCGAGATCATCCTCTACTGGAAGC...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGCCTTCTCGAATCATCTaGGTGAAGCCACCAACGATG +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKPSRII*VKPPTM
Trigger: CATCGTTGGTGGCTTCACTCAGATGATTCGAGAAGG...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGGGCACATTCACAGAATaGGATGGCTGCACACCCCAG +
Preference number: 4 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGGTFTE*DGCTPQ
Trigger: CTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCC...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAACTGTCCTTACACATGTaGGCCCGGAGCCTGCTGACC +
Preference number: 4 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQLSLHM*ARSLLT
Trigger: GGTCAGCAGGCTCCGGGCTCACATGTGTAAGGACAG...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGCGTCAGAACAGACTCTaGGCAGTCAGCCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGRQNRL*AVSQAP
Trigger: AGGAGCTTGGCTGACTGCTCAGAGTCTGTTCTGACG...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAACCCCCAGTCAAACCCTaGAATCCTAAGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQPPVKP*NPKAGG
Trigger: GCCCCCAGCCTTAGGATTTCAGGGTTTGACTGGGGG...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTTGCTGGGTGCTCCACTaGCCTCACCACCGGGAGCAA +
Preference number: 4 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGICWVLH*PHHREQ
Trigger: TTGCTCCCGGTGGTGAGGGCAGTGGAGCACCCAGCA...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR GCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGCCCTGCCCCACCTCCTaGCACCAGGTGTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQPCPTS*HQVSPP
Trigger: TGGTGGAGACACCTGGTGGCAGGAGGTGGGGCAGGG...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATCCCTGCCAAGGACCCTaGCACAAGCCTCTCGTGAAT +
Preference number: 4 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHPCQGP*HKPLVN
Trigger: ATTCACGAGAGGCTTGTGGCAGGGTCCTTGGCAGGG...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCCCAAGTTGGCGTCAATaGTGTAGGTTGGGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISPSWRQ*CRLGSQ
Trigger: CTGACTTCCCAACCTACAGCATTGACGCCAACTTGG...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGCCAAGTTGGCGTCAATaGTGTAGGTTGGGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLPSWRQ*CRLGSQ
Trigger: CTGACTTCCCAACCTACAGCATTGACGCCAACTTGG...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAATGAGCCCCAGCACTTaGCTTCTGTGCAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQMSPST*LLCSQA
Trigger: GGCCTGGCTGCACAGAAGGCAAGTGCTGGGGCTCAT...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGAACATGGTGCTCCACTaGCCTCATGCCACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: PGRPRDLTFHHGLWDWTRNMVLH*PHATVG
Trigger: CCCCACTGTGGCATGAGGGCAGTGGAGCACCATGTT...CCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGAGTCAGCCAAGCTCCTaGTCCCTCGTCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PGRPRDLTFHHGLWDWTRSQPSS*SLVFLW
Trigger: CCAGAGGAAGACGAGGGAGCAGGAGCTTGGCTGACT...CCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTTTCTGGCCGCTTTTCTaGCTCCAGTCCCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPFWPLF*LQSQKE
Trigger: TTCCTTTTGGGACTGGAGGCAGAAAAGCGGCCAGAA...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGAAAGGAGCCAGGGCTaGTGCCTTCTGGCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: PGRPRDLTFHHGLWDWTRERSQG*CLLAAF
Trigger: AAAAGCGGCCAGAAGGCAGCAGCCCTGGCTCCTTTC...CCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGCTTAGGAAACTGCTCTaGAGGTCCAACCACCAGCAA +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRLRKLL*RSNHQQ
Trigger: TTGCTGGTGGTTGGACCTGCAGAGCAGTTTCCTAAG...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR CCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTTGCATAAGACAAGCCTaGCCTCAGCTGTCATTGGCT +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPCIRQA*PQLSLA
Trigger: AGCCAATGACAGCTGAGGCCAGGCTTGTCTTATGCA...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR CCA 90 bp CCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGTTGCTGCGGGAGGCATaGACCTGCATGAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: PGRPRDLTFHHGLWDWTRLLREA*TCMSTL
Trigger: CAAGGTGCTCATGCAGGTCCATGCCTCCCGCAGCAA...CCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGCTTCAGGACCTCCATTaGGTAGATGCTGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGLQDLH*VDAALG
Trigger: GCCCAGAGCAGCATCTACCCAATGGAGGTCCTGAAG...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GATATGTTTGAAGAGGCTGCTCATGGTCACCTCCGGAGCGCCCTCAATAGAGGCAGCATTCCTGAGTACTaGCCTGTCTTCCGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: DMFEEAAHGHLRSALNRGSIPEY*PVFRSA
Trigger: GGCGCTGCGGAAGACAGGCCAGTACTCAGGAATGCT...GCCTCTATTGAGGGCGCTCCGGAGGTGACCATGAGCAGCCTCTTCAAACATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR CCA 90 bp TACAGCCCGAAGGCCCCCTCGGTCCGCAGGATATGTTTGAAGAGGCTGCTCATGATTCACAGAATGAGATaGCTGCACACCCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: YSPKAPSVRRICLKRLLMIHRMR*LHTPGC
Trigger: GCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAAT...CATGAGCAGCCTCTTCAAACATATCCTGCGGACCGAGGGGGCCTTCGGGCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR CCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCCGAGGGGGTGGGATGTaGGCTGTAGCCCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSRGGGM*AVALLP
Trigger: TGGGAGGAGGGCTACAGCCCACATCCCACCCCCTCG...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTTTTCATCATGGATTATaGGATTGGACGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QNEMAAHPRLRPRISESTFHHGL*DWTRGW
Trigger: CCACCCCCTCGTCCAATCCCATAATCCATGATGAAA...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAGTCAATGCTGTAGGTTaGGAAGTCAGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSVNAVG*EVRPGR
Trigger: CCTCCCAGGCCTGACTTCCCAACCTACAGCATTGAC...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCCCTTCACAGCCAAGTTaGCGTCAATGCTGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISPSQPS*RQCCRL
Trigger: CAACCTACAGCATTGACGCCAACTTGGCTGTGAAGG...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTCCTTCACAGCCAAGTTaGCGTCAATGCTGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPPSQPS*RQCCRL
Trigger: CAACCTACAGCATTGACGCCAACTTGGCTGTGAAGG...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGCCTTCACAGCCAAGTTaGCGTCAATGCTGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKPSQPS*RQCCRL
Trigger: CAACCTACAGCATTGACGCCAACTTGGCTGTGAAGG...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAACTTCGCCCTCAAACATaGTGCTCCACTGCCCTCATG +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKLRPQT*CSTALM
Trigger: CATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAG...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTTCCGGCTTGTCCTTCTaGACAAAACCCTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: QNEMAAHPRLRPRISESTSGLSF*TKPFSQ
Trigger: TTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGAGTGGAATGTGGGGCTaGTCCCGCTGCGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQSGMWG*SRCAPA
Trigger: AGCAGGGGCGCAGCGGGACCAGCCCCACATTCCACT...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCACCCACTGGGCGGGCTTaGGAAGGTACAATCAACCAT +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSPTGRA*EGTINH
Trigger: ATGGTTGATTGTACCTTCCCAAGCCCGCCCAGTGGG...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAACCCACTGGGCGGGCTTaGGAAGGTACAATCAACCAT +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKPTGRA*EGTINH
Trigger: ATGGTTGATTGTACCTTCCCAAGCCCGCCCAGTGGG...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTCTCCTCCCATCCCACTaGGCGGGCTTGGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGILLPSH*AGLGRY
Trigger: GTACCTTCCCAAGCCCGCCCAGTGGGATGGGAGGAG...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCACGTGAGGTCGCCAGTTaGCCGGCATTGTTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSREVAS*PALLSK
Trigger: CTTGCTTAACAATGCCGGCCAACTGGCGACCTCACG...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGGCTTGTACAATTTTCTaGAGCTCGCCCTCGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGACTIF*SSPSVR
Trigger: CCGCACCGAGGGCGAGCTCCAGAAAATTGTACAAGC...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373068.6
CDS-3UTR CCA 90 bp TTTTCTGCCTGCTGTTCAGATATCTTGACTCCCAAGTCCCGCAGGGACTGCATGCCCCTTGGTGCACAGTaGGCACTGCTTCCACTGGCG +
Preference number: 4 (lower is better)
Translates to: FSACCSDILTPKSRRDCMPLGAQ*ALLPLA
Trigger: CGCCAGTGGAAGCAGTGCCCACTGTGCACCAAGGGG...CATGCAGTCCCTGCGGGACTTGGGAGTCAAGATATCTGAACAGCAGGCAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR TCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACACCTTCTCGAATCATCTaGGTGAAGCCACCAACGATG +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATPSRII*VKPPTM
Trigger: CATCGTTGGTGGCTTCACTCAGATGATTCGAGAAGG...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCCGCAGGATATGTTTaGAGAGGCTGCTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGSAGYV*RGCSWS
Trigger: TGACCATGAGCAGCCTCTTCAAACATATCCTGCGGA...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR TCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTGGCACATTCACAGAATaGGATGGCTGCACACCCCAG +
Preference number: 4 (lower is better)
Translates to: LPRLPLEAQKSLICPACPGTFTE*DGCTPQ
Trigger: CTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCC...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GATATGTTTGAAGAGGCTGCTCATGGTCACCTCCGGAGCGCCCTCAATAGAGGCGGCACATTCACAGAATaGGATGGCTGCACACCCCAG +
Preference number: 4 (lower is better)
Translates to: DMFEEAAHGHLRSALNRGGTFTE*DGCTPQ
Trigger: CTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCC...GCCTCTATTGAGGGCGCTCCGGAGGTGACCATGAGCAGCCTCTTCAAACATATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR TCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACAATAGGTTCCAAGCAGTaGCACAAGTGGAATGTGGGG +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATIGSKQ*HKWNVG
Trigger: CCCCACATTCCACTTGTGTCACTGCTTGGAACCTAT...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGGCACCTCACTGCCTTaGCATTCAGAAAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISGTSLP*HSEKSE
Trigger: TTCACTCTTTTCTGAATGTCAAGGCAGTGAGGTGCC...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTACCACAAATTCACAGTaGGAGGCACCTCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSTTNSQ*EAPHCL
Trigger: AAGGCAGTGAGGTGCCTCTCACTGTGAATTTGTGGT...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGTCAGCTGTCATTGGCTaGTTAAGCCCTGCCCTTTTA +
Preference number: 4 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKSAVIG*LSPALL
Trigger: TAAAAGGGCAGGGCTTAAGCAGCCAATGACAGCTGA...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR GCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAAGCAAGTTCCCTAAATaGTGCCGGTCCCGGGAAACT +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSSKFPK*CRSRET
Trigger: AGTTTCCCGGGACCGGCAGCATTTAGGGAACTTGCT...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR GCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAGACTGCATGATCTCCTaGGCGTCAATGCGTCCATCA +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSDCMIS*ASMRPS
Trigger: TGATGGACGCATTGACGCGCAGGAGATCATGCAGTC...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGTCCGCGCTGTTCACTaGATAGTGCTGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGIVRAVH*IVLQPG
Trigger: GCCTGGCTGCAGCACTATGCAGTGAACAGCGCGGAC...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTCCAAGTTGGCGTCAATaGTGTAGGTTGGGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSPSWRQ*CRLGSQ
Trigger: CTGACTTCCCAACCTACAGCATTGACGCCAACTTGG...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACAAACACACAAACGCTCTaGCCTTCGCCCTCAAACATG +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATNTQTL*PSPSNM
Trigger: CATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTAACACACAAACGCTCTaGCCTTCGCCCTCAAACATG +
Preference number: 4 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSNTQTL*PSPSNM
Trigger: CATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCATTCTGGCCGCTTTTCTaGCTCCAGTCCCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPFWPLF*LQSQKE
Trigger: TTCCTTTTGGGACTGGAGGCAGAAAAGCGGCCAGAA...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATCTGGTGGAATGGAAGTaGAACCGTGAGGTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHLVEWK*NREVAS
Trigger: ACTGGCGACCTCACGGTTGCACTTCCATTCCACCAG...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAGGCCTCAGCTGTCATTaGCTGCTTAAGCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQGLSCH*LLKPCP
Trigger: AGGGCAGGGCTTAAGCAGCCAATGACAGCTGAGGCC...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR CCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTACAGACAGAGCATGTTaGCGGCCTGCTGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGITDRAC*RPAGCS
Trigger: GGAGCACCCAGCAGGCCGCCAACATGCTCTGTCTGT...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR CCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATTCGACTCAAAGTACTaGAACTCGGTCTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGFDSKY*NSVWAS
Trigger: GGAAGCCCAGACCGAGTTCCAGTACTTTGAGTCGAA...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR CCA 90 bp AGATATCTTGACTCCCAAGTCCCGCAGGGACTGCATGATCTCCTGCGCGTCAATTCCACTGGCGGTAGGTaGAGAATTCCTGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RYLDSQVPQGLHDLLRVNSTGGR*RIPGRG
Trigger: TCCCCTCCCAGGAATTCTCCACCTACCGCCAGTGGA...ATTGACGCGCAGGAGATCATGCAGTCCCTGCGGGACTTGGGAGTCAAGATATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR CCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTCCCGCCAGAGTGACCTaGCCCCTCCTTCTCGAATCA +
Preference number: 4 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGIPARVT*PLLLES
Trigger: TGATTCGAGAAGGAGGGGCCAGGTCACTCTGGCGGG...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACACTCCAAGCTCGCTATTaGCAGGCACTGCAGAAAATG +
Preference number: 4 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATLQARY*QALQKM
Trigger: CATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAG...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTTTTCATCATGGATTATaGGATTGGACGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPFHHGL*DWTRGW
Trigger: CCACCCCCTCGTCCAATCCCATAATCCATGATGAAA...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCTTTCATCATGGATTATaGGATTGGACGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISFHHGL*DWTRGW
Trigger: CCACCCCCTCGTCCAATCCCATAATCCATGATGAAA...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGTCAATGCTGTAGGTTaGGAAGTCAGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHVNAVG*EVRPGR
Trigger: CCTCCCAGGCCTGACTTCCCAACCTACAGCATTGAC...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGTCCGGCTTGTCCTTCTaGACAAAACCCTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRSGLSF*TKPFSQ
Trigger: TTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCGACACAAGTGGAATGTaGGGCTGGTCCCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSDTSGM*GWSRCA
Trigger: GGCGCAGCGGGACCAGCCCCACATTCCACTTGTGTC...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTCGTGAGGTCGCCAGTTaGCCGGCATTGTTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: LPRLPLEAQKSLICPACPREVAS*PALLSK
Trigger: CTTGCTTAACAATGCCGGCCAACTGGCGACCTCACG...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGAGTCATTCTGGTGGAATaGAAGTGCAACCGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGVILVE*KCNREV
Trigger: GACCTCACGGTTGCACTTCCATTCCACCAGAATGAC...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCATCAGGTCATTCTGGTaGAATGGAAGTGCAACCGTG +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISIRSFW*NGSATV
Trigger: CACGGTTGCACTTCCATTCCACCAGAATGACCTGAT...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCCTCATCAGGTCATTCTaGTGGAATGGAAGTGCAACC +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISLIRSF*WNGSAT
Trigger: GGTTGCACTTCCATTCCACCAGAATGACCTGATGAG...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAACCTTCTCGAATCATCTaGGTGAAGCCACCAACGATG +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKPSRII*VKPPTM
Trigger: CATCGTTGGTGGCTTCACTCAGATGATTCGAGAAGG...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGCAGCTCAGAGCACCATaGGCCCCAGCACTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQQLRAP*APALAF
Trigger: GAAGGCAAGTGCTGGGGCTCATGGTGCTCTGAGCTG...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTAGTCAATGGTCATCGTaGCGTTTTTATCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETASQWSS*RFYPCS
Trigger: AGAGCATGGATAAAAACGGCACGATGACCATTGACT...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373064.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGGCCAACAGCTGGCTaGAAGGGTGAAATGGAAGAA +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSWPTAG*KGEMEE
Trigger: TTCTTCCATTTCACCCTTGCAGCCAGCTGTTGGCCA...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCATGAGCCCCAGCACTTaGCTTCTGTGCAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSMSPST*LLCSQA
Trigger: GGCCTGGCTGCACAGAAGGCAAGTGCTGGGGCTCAT...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAAACACACAAACGCTCTaGCCTTCGCCCTCAAACATG +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSNTQTL*PSPSNM
Trigger: CATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGAACACACAAACGCTCTaGCCTTCGCCCTCAAACATG +
Preference number: 4 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGNTQTL*PSPSNM
Trigger: CATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATTCTGGCCGCTTTTCTaGCTCCAGTCCCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKFWPLF*LQSQKE
Trigger: TTCCTTTTGGGACTGGAGGCAGAAAAGCGGCCAGAA...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGGCAGGGGCGGTTTCCTaGTTTTTCAAATGTGCTAGC +
Preference number: 4 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGAGAVS*FFKCAS
Trigger: GCTAGCACATTTGAAAAAGCAGGAAACCGCCCCTGC...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR GCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAAAATGCCACAGCATCTaGAACATCACGGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSKCHSI*NITVSS
Trigger: GGAGGAGACCGTGATGTTGCAGATGCTGTGGCATTT...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR GCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGAAGCTAGCTAGGAAATaGCACAGCATCTGCAACATC +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRKLARK*HSICNI
Trigger: GATGTTGCAGATGCTGTGGCATTTCCTAGCTAGCTT...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR GCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCATTTTCTTAGGAAACTaGTCTGCAGGTCCAACCACC +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISIFLGN*SAGPTT
Trigger: GGTGGTTGGACCTGCAGAGCAGTTTCCTAAGAAAAT...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR CCA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTACTCGTTCCAGTCAATaGTCATCGTGCCGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: PTLPAGASRVFTAWLETATRSSQ*SSCRFY
Trigger: ATAAAAACGGCACGATGACCATTGACTGGAACGAGT...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCCCCGCCAGAGTGACCTaGCCCCTCCTTCTCGAATCA +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSPARVT*PLLLES
Trigger: TGATTCGAGAAGGAGGGGCCAGGTCACTCTGGCGGG...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGAACAGGAGGGTCTGCTaGGGTCAGCAGGACAAGCCC +
Preference number: 4 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQNRRVC*GQQDKP
Trigger: GGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTT...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATTTCATCATGGATTATaGGATTGGACGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGFHHGL*DWTRGW
Trigger: CCACCCCCTCGTCCAATCCCATAATCCATGATGAAA...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTTCCCTCGTCTTCCTCTaGAAGCACAGAAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: LPRLPLEAQKSLICPACPSLVFL*KHRSRS
Trigger: TGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGA...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGACTCATCAGGTCATTCTaGTGGAATGGAAGTGCAACC +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGLIRSF*WNGSAT
Trigger: GGTTGCACTTCCATTCCACCAGAATGACCTGATGAG...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATCCTTCTCGAATCATCTaGGTGAAGCCACCAACGATG +
Preference number: 4 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHPSRII*VKPPTM
Trigger: CATCGTTGGTGGCTTCACTCAGATGATTCGAGAAGG...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTTCCGCAGGATATGTTTaGAGAGGCTGCTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: LPRLPLEAQKSLICPACPSAGYV*RGCSWS
Trigger: TGACCATGAGCAGCCTCTTCAAACATATCCTGCGGA...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAAGCTGGCTGCAAGGGTaGAATGGAAGAACTAAGCCG +
Preference number: 4 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQSWLQG*NGRTKP
Trigger: CGGCTTAGTTCTTCCATTTCACCCTTGCAGCCAGCT...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp TCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCTTCTCTGGACAGATGTaGCTGCAGCGGCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SGLSFWTKPFSQQSIIKAFSGQM*LQRPKA
Trigger: GGCCTTGGGCCGCTGCAGTCACATCTGTCCAGAGAA...GGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTCACCTTCAAGGTTATTaGGGTTCCTCCCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LPRLPLEAQKSLICPACPHLQGY*GSSLSL
Trigger: GAGAGAGAGGGAGGAACCTCAATAACCTTGAAGGTG...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTTCCTCCAAACGCCTCTaGTGGCGACTGTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: LPRLPLEAQKSLICPACPSSKRL*WRLFTF
Trigger: AAAAGTGAACAGTCGCCATCAGAGGCGTTTGGAGGA...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR GCA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGAAGGTGGCATCAGGTTaGTCAAGTGAGAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGKVASG*SSERHK
Trigger: TTTGTGCCTCTCACTTGAGCAACCTGATGCCACCTT...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR GCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTTCTTCAAAGTCTAGCTaGCCATCAAGGTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPSSKSS*PSRSLS
Trigger: AGATAAGGACCTTGATGGGCAGCTAGACTTTGAAGA...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGCCCTGCCAAGGACCCTaGCACAAGCCTCTCGTGAAT +
Preference number: 4 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQPCQGP*HKPLVN
Trigger: ATTCACGAGAGGCTTGTGGCAGGGTCCTTGGCAGGG...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp TCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCGCTCCACTGCCCTCATaGCACAGTGGGGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: SGLSFWTKPFSQQSIIKAAPLPS*HSGDSE
Trigger: CTCACTGTCCCCACTGTGGCATGAGGGCAGTGGAGC...GGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCAGTCAGCCAAGCTCCTaGTCCCTCGTCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSSQPSS*SLVFLW
Trigger: CCAGAGGAAGACGAGGGAGCAGGAGCTTGGCTGACT...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATTTCTGGCCGCTTTTCTaGCTCCAGTCCCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHFWPLF*LQSQKE
Trigger: TTCCTTTTGGGACTGGAGGCAGAAAAGCGGCCAGAA...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGAAAGCTAGCTAGGAAATaGCACAGCATCTGCAACATC +
Preference number: 4 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGKLARK*HSICNI
Trigger: GATGTTGCAGATGCTGTGGCATTTCCTAGCTAGCTT...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR GCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATCTTAGGAAACTGCTCTaGAGGTCCAACCACCAGCAA +
Preference number: 4 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHLRKLL*RSNHQQ
Trigger: TTGCTGGTGGTTGGACCTGCAGAGCAGTTTCCTAAG...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTATTTTCTTAGGAAACTaGTCTGCAGGTCCAACCACC +
Preference number: 4 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSIFLGN*SAGPTT
Trigger: GGTGGTTGGACCTGCAGAGCAGTTTCCTAAGAAAAT...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR GCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGAGTCAATGGTCATCGTaGCGTTTTTATCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLSQWSS*RFYPCR
Trigger: CCTACATGGATAAAAACGGCACGATGACCATTGACT...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373066.9
CDS-3UTR CCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTACTCGTTCCAGTCAATaGTCATCGTGCCGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPTRSSQ*SSCRFY
Trigger: ATAAAAACGGCACGATGACCATTGACTGGAACGAGT...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCTTGCTGCGGGAGGCATaGACCTGCATGAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSLLREA*TCMSTL
Trigger: CAAGGTGCTCATGCAGGTCCATGCCTCCCGCAGCAA...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCAGCATTCCTGAGTACTaGCCTGTCTTCCGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSSIPEY*PVFRSA
Trigger: GGCGCTGCGGAAGACAGGCCAGTACTCAGGAATGCT...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp TCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCGATTGGACGAGGGGGTaGGATGTGGGCTGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: SGLSFWTKPFSQQSIIKADWTRG*DVGCSP
Trigger: AGGGCTACAGCCCACATCCCACCCCCTCGTCCAATC...GGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTCCTCACCTTTCATCATaGATTATGGGATTGGACGAG +
Preference number: 4 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSPHLSS*IMGLDE
Trigger: CTCGTCCAATCCCATAATCCATGATGAAAGGTGAGG...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTCTTCGCCCTCAAACATaGTGCTCCACTGCCCTCATG +
Preference number: 4 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGILRPQT*CSTALM
Trigger: CATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAG...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCAGCGCAGGAAATAACTaGATTCCACCTTCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISSAGNN*IPPSRL
Trigger: TAACCTTGAAGGTGGAATCCAGTTATTTCCTGCGCT...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGAGCGCAGGAAATAACTaGATTCCACCTTCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRSAGNN*IPPSRL
Trigger: TAACCTTGAAGGTGGAATCCAGTTATTTCCTGCGCT...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGTCATTCTGGTGGAATaGAAGTGCAACCGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHVILVE*KCNREV
Trigger: GACCTCACGGTTGCACTTCCATTCCACCAGAATGAC...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAAATCAGGTCATTCTGGTaGAATGGAAGTGCAACCGTG +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKIRSFW*NGSATV
Trigger: CACGGTTGCACTTCCATTCCACCAGAATGACCTGAT...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAATCAGGTCATTCTGGTaGAATGGAAGTGCAACCGTG +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSIRSFW*NGSATV
Trigger: CACGGTTGCACTTCCATTCCACCAGAATGACCTGAT...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
3UTR CAA 72 bp CCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTaGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PSSSSGSTEVAH*SGLSFWTKPFS
Trigger: GGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
3UTR CAA 72 bp AGCGCAGGAAATAACTGGATTCCACCTTCAAGGTTATaGAGGTTCCTCCCTCTCTCTCCACGCCCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: SAGNNWIPPSRL*RFLPLSPRPQS
Trigger: TGACTGGGGGCGTGGAGAGAGAGGGAGGAACCTCAATAACCTTGAAGGTGGAATCCAGTTATTTCCTGCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
CDS-3UTR TCA 90 bp TCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCGCCTCTCCTCCACTGTaGACTCATCCGGGACCGTTA +
Preference number: 4 (lower is better)
Translates to: SGLSFWTKPFSQQSIIKAASPPL*THPGPL
Trigger: TAACGGTCCCGGATGAGTTCACAGTGGAGGAGAGGC...GGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp TCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCGCAGTCCAGCATTCCTaGGTACTGGCCTGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: SGLSFWTKPFSQQSIIKAAVQHS*VLACLP
Trigger: CGGAAGACAGGCCAGTACTCAGGAATGCTGGACTGC...GGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCGCAGCCAGGCATTCTTaGGCGTCTCGTAGACTGCAA +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSAARHS*ASRRLQ
Trigger: TTGCAGTCTACGAGACGCTCAAGAATGCCTGGCTGC...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGCGTCAGAACAGACTCTaGGCAGTCAGCCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQRQNRL*AVSQAP
Trigger: AGGAGCTTGGCTGACTGCTCAGAGTCTGTTCTGACG...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTATCTTTGCATCCTATTaGAGATTTCCTCATCAGGTC +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPIFASY*RFPHQV
Trigger: GACCTGATGAGGAAATCTTCAATAGGATGCAAAGAT...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGATCTTTGCATCCTATTaGAGATTTCCTCATCAGGTC +
Preference number: 4 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLIFASY*RFPHQV
Trigger: GACCTGATGAGGAAATCTTCAATAGGATGCAAAGAT...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTGAAGGCTGCTTTAAATaGCAACTTCTAACGTCCAAT +
Preference number: 4 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPEGCFK*QLLTSN
Trigger: ATTGGACGTTAGAAGTTGTCATTTAAAGCAGCCTTC...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCTATTGGCAGGCACTaGAGAAAATGTCCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHAIGRH*RKCPVL
Trigger: AAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGC...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAGCAGGGGCGGTTTCCTaGTTTTTCAAATGTGCTAGC +
Preference number: 4 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQAGAVS*FFKCAS
Trigger: GCTAGCACATTTGAAAAAGCAGGAAACCGCCCCTGC...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR GCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAAAATGCCACAGCATCTaGAACATCACGGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQKCHSI*NITVSS
Trigger: GGAGGAGACCGTGATGTTGCAGATGCTGTGGCATTT...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR GCA 90 bp AGGGACTGCATGATCTCCTGCGCGTCAATGCGTCCATCATTCTTTTTGTCCAAAGCAAATCCCCCTTGGTaGACAGTGGGCACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RDCMISCASMRPSFFLSKANPPW*TVGTAS
Trigger: GGAAGCAGTGCCCACTGTGCACCAAGGGGGATTTGC...TTTGGACAAAAAGAATGATGGACGCATTGACGCGCAGGAGATCATGCAGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR CCA 90 bp TCAAGGTCCTTATCTCCAGCTTGTACAATTTTCGCAGCTGGCTTCAACGCATTCTACTGGAACTCGGTCTaGGCTTCCCCGATGACCGGC +
Preference number: 4 (lower is better)
Translates to: SRSLSPACTIFAAGFNAFYWNSV*ASPMTG
Trigger: GCCGGTCATCGGGGAAGCCCAGACCGAGTTCCAGTA...GAATGCGTTGAAGCCAGCTGCGAAAATTGTACAAGCTGGAGATAAGGACCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR CCA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCAACTCGTTCCAGTCAATaGTCATCGTGCCGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPTRSSQ*SSCRFY
Trigger: ATAAAAACGGCACGATGACCATTGACTGGAACGAGT...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAACCACATCAAAGATCGTaGAATGCTTCCAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKPHQRS*NASSRG
Trigger: TCCTCTACTGGAAGCATTCCACGATCTTTGATGTGG...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCCTTCAGGACCTCCATTaGGTAGATGCTGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSLQDLH*VDAALG
Trigger: GCCCAGAGCAGCATCTACCCAATGGAGGTCCTGAAG...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGCTTCGCCCTCAAACATaGTGCTCCACTGCCCTCATG +
Preference number: 4 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQLRPQT*CSTALM
Trigger: CATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAG...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTTCCGGCTTGTCCTTCTaGACAAAACCCTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LPRLPLEAQKSLICPACPSGLSF*TKPFSQ
Trigger: TTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGATCAGGTCATTCTGGTaGAATGGAAGTGCAACCGTG +
Preference number: 4 (lower is better)
Translates to: PGRPRDLTFHHGLWDWTRIRSFW*NGSATV
Trigger: CACGGTTGCACTTCCATTCCACCAGAATGACCTGAT...CCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGCTCATCAGGTCATTCTaGTGGAATGGAAGTGCAACC +
Preference number: 4 (lower is better)
Translates to: PGRPRDLTFHHGLWDWTRLIRSF*WNGSAT
Trigger: GGTTGCACTTCCATTCCACCAGAATGACCTGATGAG...CCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTATCAGGTTGCTCAAGTaGGAGGCACAAAGATCAGGG +
Preference number: 4 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGIIRLLK*EAQRSG
Trigger: CCCTGATCTTTGTGCCTCTCACTTGAGCAACCTGAT...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR TCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGCTTCCAGTAGAGGATaGTCTCGGGGATGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGIASSRG*SRGCFP
Trigger: TGGAAAACATCCCCGAGATCATCCTCTACTGGAAGC...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp TCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCGCAGCCAGGCATTCTTaGGCGTCTCGTAGACTGCAA +
Preference number: 4 (lower is better)
Translates to: SGLSFWTKPFSQQSIIKAAARHS*ASRRLQ
Trigger: TTGCAGTCTACGAGACGCTCAAGAATGCCTGGCTGC...GGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCAGCTGGCTGCAAGGGTaGAATGGAAGAACTAAGCCG +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSSWLQG*NGRTKP
Trigger: CGGCTTAGTTCTTCCATTTCACCCTTGCAGCCAGCT...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGAGCTGGCTGCAAGGGTaGAATGGAAGAACTAAGCCG +
Preference number: 4 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQSWLQG*NGRTKP
Trigger: CGGCTTAGTTCTTCCATTTCACCCTTGCAGCCAGCT...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTCACCTTCAAGGTTATTaGGGTTCCTCCCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGIHLQGY*GSSLSL
Trigger: GAGAGAGAGGGAGGAACCTCAATAACCTTGAAGGTG...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTACCACAAATTCACAGTaGGAGGCACCTCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGITTNSQ*EAPHCL
Trigger: AAGGCAGTGAGGTGCCTCTCACTGTGAATTTGTGGT...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCAGAAGGCTGCTTTAAATaGCAACTTCTAACGTCCAAT +
Preference number: 4 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPEGCFK*QLLTSN
Trigger: ATTGGACGTTAGAAGTTGTCATTTAAAGCAGCCTTC...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTGAAGGCTGCTTTAAATaGCAACTTCTAACGTCCAAT +
Preference number: 4 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSEGCFK*QLLTSN
Trigger: ATTGGACGTTAGAAGTTGTCATTTAAAGCAGCCTTC...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGGACTGCATGATCTCCTaGGCGTCAATGCGTCCATCA +
Preference number: 4 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQDCMIS*ASMRPS
Trigger: TGATGGACGCATTGACGCGCAGGAGATCATGCAGTC...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCCTGGACCCTAAGGAATaGCTGTGGTCTTCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSLDPKE*LWSSLE
Trigger: TTCCAGCGAAGACCACAGGCATTCCTTAGGGTCCAG...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTCCAAGTTGGCGTCAATaGTGTAGGTTGGGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGIPSWRQ*CRLGSQ
Trigger: CTGACTTCCCAACCTACAGCATTGACGCCAACTTGG...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTCCACATCAAAGATCGTaGAATGCTTCCAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: LPRLPLEAQKSLICPACPPHQRS*NASSRG
Trigger: TCCTCTACTGGAAGCATTCCACGATCTTTGATGTGG...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGATTCACAGAATGAGATaGCTGCACACCCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQIHRMR*LHTPGC
Trigger: GCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAAT...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAATCCGGCTTGTCCTTCTaGACAAAACCCTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQSGLSF*TKPFSQ
Trigger: TTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCTCCCTCGTCTTCCTCTaGAAGCACAGAAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSSLVFL*KHRSRS
Trigger: TGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGA...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAAAGCGCAGGAAATAACTaGATTCCACCTTCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKSAGNN*IPPSRL
Trigger: TAACCTTGAAGGTGGAATCCAGTTATTTCCTGCGCT...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCAAAAAGCTTGCCATCTaGTCTCTCCAGGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSKKLAI*SLQAGA
Trigger: AGCCCCTGCCTGGAGAGACCAGATGGCAAGCTTTTT...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
3UTR CAA 72 bp TCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTaGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCC +
Preference number: 4 (lower is better)
Translates to: SSGSTEVAHLSG*SFWTKPFSQQS
Trigger: GGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.9
ENST00000432073.6
CDS-3UTR TCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCTCCGCAGGATATGTTTaGAGAGGCTGCTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSSAGYV*RGCSWS
Trigger: TGACCATGAGCAGCCTCTTCAAACATATCCTGCGGA...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp TCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCAGCTGGCTGCAAGGGTaGAATGGAAGAACTAAGCCG +
Preference number: 4 (lower is better)
Translates to: SGLSFWTKPFSQQSIIKASWLQG*NGRTKP
Trigger: CGGCTTAGTTCTTCCATTTCACCCTTGCAGCCAGCT...GGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGACCACAAATTCACAGTaGGAGGCACCTCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQTTNSQ*EAPHCL
Trigger: AAGGCAGTGAGGTGCCTCTCACTGTGAATTTGTGGT...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCACCACAAATTCACAGTaGGAGGCACCTCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSTTNSQ*EAPHCL
Trigger: AAGGCAGTGAGGTGCCTCTCACTGTGAATTTGTGGT...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAATCTTTGCATCCTATTaGAGATTTCCTCATCAGGTC +
Preference number: 4 (lower is better)
Translates to: EHTNALPFALKHGAPLPSIFASY*RFPHQV
Trigger: GACCTGATGAGGAAATCTTCAATAGGATGCAAAGAT...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATTCTTCAAAGTCTAGCTaGCCATCAAGGTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHSSKSS*PSRSLS
Trigger: AGATAAGGACCTTGATGGGCAGCTAGACTTTGAAGA...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGAGTCAATGGTCATCGTaGCGTTTTTATCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: PGRPRDLTFHHGLWDWTRSQWSS*RFYPCS
Trigger: AGAGCATGGATAAAAACGGCACGATGACCATTGACT...CCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373064.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCTGGCCAACAGCTGGCTaGAAGGGTGAAATGGAAGAA +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSWPTAG*KGEMEE
Trigger: TTCTTCCATTTCACCCTTGCAGCCAGCTGTTGGCCA...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAACCACATCAAAGATCGTaGAATGCTTCCAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQPHQRS*NASSRG
Trigger: TCCTCTACTGGAAGCATTCCACGATCTTTGATGTGG...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCCTCCAAGCTCGCTATTaGCAGGCACTGCAGAAAATG +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSLQARY*QALQKM
Trigger: CATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAG...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTAGCGCAGGAAATAACTaGATTCCACCTTCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: LPRLPLEAQKSLICPACPSAGNN*IPPSRL
Trigger: TAACCTTGAAGGTGGAATCCAGTTATTTCCTGCGCT...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTCTCATCAGGTCATTCTaGTGGAATGGAAGTGCAACC +
Preference number: 4 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGILIRSF*WNGSAT
Trigger: GGTTGCACTTCCATTCCACCAGAATGACCTGATGAG...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp AGGGACTGCATGATCTCCTGCGCGTCAATGCGTCCATCATTCTTTTTGTCCAAAGCTTCCAGTAGAGGATaGTCTCGGGGATGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RDCMISCASMRPSFFLSKASSRG*SRGCFP
Trigger: TGGAAAACATCCCCGAGATCATCCTCTACTGGAAGC...TTTGGACAAAAAGAATGATGGACGCATTGACGCGCAGGAGATCATGCAGTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR TCA 90 bp TCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCTCCGCAGGATATGTTTaGAGAGGCTGCTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: SGLSFWTKPFSQQSIIKASAGYV*RGCSWS
Trigger: TGACCATGAGCAGCCTCTTCAAACATATCCTGCGGA...GGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp TCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCCACCTTCAAGGTTATTaGGGTTCCTCCCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SGLSFWTKPFSQQSIIKAHLQGY*GSSLSL
Trigger: GAGAGAGAGGGAGGAACCTCAATAACCTTGAAGGTG...GGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp CTTGTACAATTTTCGCAGCTGGCTTCAACGCATTCTCAAAGTGCTTGCTTCTGCGACTGCATGATCTCCTaGGCGTCAATGCGTCCATCA +
Preference number: 4 (lower is better)
Translates to: LVQFSQLASTHSQSACFCDCMIS*ASMRPS
Trigger: TGATGGACGCATTGACGCGCAGGAGATCATGCAGTC...GCAGAAGCAAGCACTTTGAGAATGCGTTGAAGCCAGCTGCGAAAATTGTACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR GCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCGCTATTGGCAGGCACTaGAGAAAATGTCCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSAIGRH*RKCPVL
Trigger: AAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGC...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp TCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCTGGCCAACAGCTGGCTaGAAGGGTGAAATGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SGLSFWTKPFSQQSIIKAWPTAG*KGEMEE
Trigger: TTCTTCCATTTCACCCTTGCAGCCAGCTGTTGGCCA...GGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp TCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCGGCACCTCACTGCCTTaGCATTCAGAAAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: SGLSFWTKPFSQQSIIKAGTSLP*HSEKSE
Trigger: TTCACTCTTTTCTGAATGTCAAGGCAGTGAGGTGCC...GGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAGAAGGCTGCTTTAAATaGCAACTTCTAACGTCCAAT +
Preference number: 4 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQEGCFK*QLLTSN
Trigger: ATTGGACGTTAGAAGTTGTCATTTAAAGCAGCCTTC...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTTCTTCAAAGTCTAGCTaGCCATCAAGGTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGISSKSS*PSRSLS
Trigger: AGATAAGGACCTTGATGGGCAGCTAGACTTTGAAGA...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp CTTGTACAATTTTCGCAGCTGGCTTCAACGCATTCTCAAAGTGCTTGCTTCTGCTTCGACTCAAAGTACTaGAACTCGGTCTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LVQFSQLASTHSQSACFCFDSKY*NSVWAS
Trigger: GGAAGCCCAGACCGAGTTCCAGTACTTTGAGTCGAA...GCAGAAGCAAGCACTTTGAGAATGCGTTGAAGCCAGCTGCGAAAATTGTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR CCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGCCACATCAAAGATCGTaGAATGCTTCCAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQPHQRS*NASSRG
Trigger: TCCTCTACTGGAAGCATTCCACGATCTTTGATGTGG...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR TCA 90 bp ATTCTTCAAAGTCTAGCTGCCCATCAAGGTCCTTATCTCCAGCTTGTACAATTTGCTGTTCAGATATCTTaGCTCCCAAGTCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: ILQSLAAHQGPYLQLVQFAVQIS*LPSPAG
Trigger: CCCTGCGGGACTTGGGAGTCAAGATATCTGAACAGC...AAATTGTACAAGCTGGAGATAAGGACCTTGATGGGCAGCTAGACTTTGAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR GCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCTTCAAAGTCTAGCTaGCCATCAAGGTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQSSKSS*PSRSLS
Trigger: AGATAAGGACCTTGATGGGCAGCTAGACTTTGAAGA...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR GCA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCAGTCAATGGTCATCGTaGCGTTTTTATCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSSQWSS*RFYPCS
Trigger: AGAGCATGGATAAAAACGGCACGATGACCATTGACT...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373064.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGACTCGTTCCAGTCAATaGTCATCGTGCCGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQTRSSQ*SSCRFY
Trigger: ATAAAAACGGCACGATGACCATTGACTGGAACGAGT...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CCA 90 bp AGTCTAGCTGCCCATCAAGGTCCTTATCTCCAGCTTGTACAATTTTCGCAGCTGCCACATCAAAGATCGTaGAATGCTTCCAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SLAAHQGPYLQLVQFSQLPHQRS*NASSRG
Trigger: TCCTCTACTGGAAGCATTCCACGATCTTTGATGTGG...CAGCTGCGAAAATTGTACAAGCTGGAGATAAGGACCTTGATGGGCAGCTAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR GCA 90 bp AGTCTAGCTGCCCATCAAGGTCCTTATCTCCAGCTTGTACAATTTTCGCAGCTGTCTTCAAAGTCTAGCTaGCCATCAAGGTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: SLAAHQGPYLQLVQFSQLSSKSS*PSRSLS
Trigger: AGATAAGGACCTTGATGGGCAGCTAGACTTTGAAGA...CAGCTGCGAAAATTGTACAAGCTGGAGATAAGGACCTTGATGGGCAGCTAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR GCA 90 bp AGGGACTGCATGATCTCCTGCGCGTCAATGCGTCCATCATTCTTTTTGTCCAAAAGTCAATGGTCATCGTaGCGTTTTTATCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: RDCMISCASMRPSFFLSKSQWSS*RFYPCS
Trigger: AGAGCATGGATAAAAACGGCACGATGACCATTGACT...TTTGGACAAAAAGAATGATGGACGCATTGACGCGCAGGAGATCATGCAGTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR GCA 90 bp ATTCTTCAAAGTCTAGCTGCCCATCAAGGTCCTTATCTCCAGCTTGTACAATTTCTCCTTCCTTGGATCTaGAAATCCCCCTTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: ILQSLAAHQGPYLQLVQFLLPWI*KSPLVH
Trigger: GTGCACCAAGGGGGATTTGCAGATCCAAGGAAGGAG...AAATTGTACAAGCTGGAGATAAGGACCTTGATGGGCAGCTAGACTTTGAAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR GCA 90 bp ATTCTTCAAAGTCTAGCTGCCCATCAAGGTCCTTATCTCCAGCTTGTACAATTTAACGCATTCTCAAAGTaGTTGCTTCTGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: ILQSLAAHQGPYLQLVQFNAFSK*LLLPHR
Trigger: CCTGTGAGGCAGAAGCAAGCACTTTGAGAATGCGTT...AAATTGTACAAGCTGGAGATAAGGACCTTGATGGGCAGCTAGACTTTGAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR CCA 90 bp CTTGTACAATTTTCGCAGCTGGCTTCAACGCATTCTCAAAGTGCTTGCTTCTGCTACAATTTTCGCAGCTaGCTTCAACGCATTCTCAAA +
Preference number: 4 (lower is better)
Translates to: LVQFSQLASTHSQSACFCYNFRS*LQRILK
Trigger: TTTGAGAATGCGTTGAAGCCAGCTGCGAAAATTGTA...GCAGAAGCAAGCACTTTGAGAATGCGTTGAAGCCAGCTGCGAAAATTGTACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR CCA 90 bp ATTCTTCAAAGTCTAGCTGCCCATCAAGGTCCTTATCTCCAGCTTGTACAATTTACTCGTTCCAGTCAATaGTCATCGTGCCGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: ILQSLAAHQGPYLQLVQFTRSSQ*SSCRFY
Trigger: ATAAAAACGGCACGATGACCATTGACTGGAACGAGT...AAATTGTACAAGCTGGAGATAAGGACCTTGATGGGCAGCTAGACTTTGAAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS TCA 90 bp CCCGCAGATAGCGCCGCCGCAGGGGTCCCCCACGGACGCCGGCGATaGGGCAGACGAAGAGGCGGCGGTGGCGGCGGCGTCCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: PADSAAAGVPHGRRR*GRRRGGGGGGVRRR
Trigger: CCGCCGCCGGACGCCGCCGCCACCGCCGCCTCTTCGTCTGCCTCATCGCCGGCGTCCGTGGGGGACCCCTGCGGCGGCGCTATCTGCGGG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373068.6
ENST00000373069.10
CDS CCA 90 bp GGTCCCCCACGGACGCCGGCGATGAGGCAGACGAAGAGGCGGCGGTaGCGGCGGCGTCCGGCGGCGGGGAGGCCACACAGCGGCACAACA +
Preference number: 5 (lower is better)
Translates to: GPPRTPAMRQTKRRR*RRRPAAGRPHSGTT
Trigger: TGTTGTGCCGCTGTGTGGCCTCCCCGCCGCCGGACGCCGCCGCCACCGCCGCCTCTTCGTCTGCCTCATCGCCGGCGTCCGTGGGGGACC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373068.6
ENST00000373069.10
CDS TCA 90 bp AGGTCGTTGACACACAGGCCGCCGTCCCGGTTGACGTCGAGCGTCTaGAAGAGTCTCCACAGGCGCAGCCGGTGGTCCGGGCCCCCGCAG +
Preference number: 5 (lower is better)
Translates to: RSLTHRPPSRLTSSV*KSLHRRSRWSGPPQ
Trigger: CTGCGGGGGCCCGGACCACCGGCTGCGCCTGTGGAGACTCTTTCAGACGCTCGACGTCAACCGGGACGGCGGCCTGTGTGTCAACGACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373068.6
ENST00000373069.10
CDS-3UTR CAA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCACGATGCCCATGTTGTaGCTGCGGGAGGCATGGACC +
Preference number: 5 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGTMPML*LREAWT
Trigger: GGTCCATGCCTCCCGCAGCAACAACATGGGCATCGT...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS CCA 90 bp CTGGAACCCGACTGCCGCGCCTGGGGCCTGGCTGGGCTCCTAGCCTaGCTGCCCTGTTTCTGCTGTCACTGGGAATTCCGGGACAAGGTA +
Preference number: 5 (lower is better)
Translates to: LEPDCRAWGLAGLLA*LPCFCCHWEFRDKV
Trigger: TACCTTGTCCCGGAATTCCCAGTGACAGCAGAAACAGGGCAGCCAGGCTAGGAGCCCAGCCAGGCCCCAGGCGCGGCAGTCGGGTTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682638.1
CDS-3UTR CAA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTGCCCTCAATAGAGGCTaGCGCCTGCATCCGGGTCCT +
Preference number: 5 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTALNRG*RLHPGP
Trigger: AGGACCCGGATGCAGGCGCAAGCCTCTATTGAGGGC...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTGTGGGGACAGTGAGTTaGGTTCTGAGGTGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTVGTVS*VLRWGP
Trigger: TGGGCCCCACCTCAGAACCAAACTCACTGTCCCCAC...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTAGGGCCAGCCTTACCTaGCGCCTGCATCCGGGTCCT +
Preference number: 5 (lower is better)
Translates to: QNEMAAHPRLRPRISESTRASLT*RLHPGP
Trigger: AGGACCCGGATGCAGGCGCAAGGTAAGGCTGGCCCT...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR CAA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCGTCCGCAGGATATGTTaGAAGAGGCTGCTCATGGTC +
Preference number: 5 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGVRRIC*KRLLMV
Trigger: GACCATGAGCAGCCTCTTCAAACATATCCTGCGGAC...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR CAA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTCATGAGCCCCAGCACTaGCCTTCTGTGCAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: PTLPAGASRVFTAWLETAHEPQH*PSVQPG
Trigger: GCCTGGCTGCACAGAAGGCAAGTGCTGGGGCTCATG...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCGCTCATTTGTCCGGCTaGTCCTTCTGGACAAAACCC +
Preference number: 5 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGAHLSG*SFWTKP
Trigger: GGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGC...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCACAGAAGTCGCTCATTaGTCCGGCTTGTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGTEVAH*SGLSFW
Trigger: CCAGAAGGACAAGCCGGACAAATGAGCGACTTCTGT...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS TCA 90 bp TCCTCACTTTCAGGGCAGACACAGGCCCTGTTCCACAGCGATGTCTaGGAGTCGAGAAGGCGGGAGGCTCCCTCACCCCCACACCAGGGA +
Preference number: 5 (lower is better)
Translates to: SSLSGQTQALFHSDV*ESRRREAPSPPHQG
Trigger: TCCCTGGTGTGGGGGTGAGGGAGCCTCCCGCCTTCTCGACTCTCAGACATCGCTGTGGAACAGGGCCTGTGTCTGCCCTGAAAGTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683206.1
CDS GCA 90 bp CCGGCACATACAGGCACAGACAGAGCATGTTGGCGGCCTGCTGGGTaGTCCACTGCCCTCACCACCGGGAGCAAGTTCCCTAAATGCTGC +
Preference number: 5 (lower is better)
Translates to: PAHTGTDRACWRPAG*STALTTGSKFPKCC
Trigger: GCAGCATTTAGGGAACTTGCTCCCGGTGGTGAGGGCAGTGGAGCACCCAGCAGGCCGCCAACATGCTCTGTCTGTGCCTGTATGTGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS GCA 90 bp GCCACAGGCCAGGAGCACAAACACGCCGGGGTCCGCGCTGTTCACTaGATAGTGCTGCAGCCAGGCATTCTTGAGCGTCTCGTAGACTGC +
Preference number: 5 (lower is better)
Translates to: ATGQEHKHAGVRAVH*IVLQPGILERLVDC
Trigger: GCAGTCTACGAGACGCTCAAGAATGCCTGGCTGCAGCACTATGCAGTGAACAGCGCGGACCCCGGCGTGTTTGTGCTCCTGGCCTGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.10
ENST00000432073.6
ENST00000466983.1
ENST00000682371.1
ENST00000683206.1
CDS-3UTR CAA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTACGATGCCCATGTTGTaGCTGCGGGAGGCATGGACC +
Preference number: 5 (lower is better)
Translates to: QNEMAAHPRLRPRISESTTMPML*LREAWT
Trigger: GGTCCATGCCTCCCGCAGCAACAACATGGGCATCGT...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTCCAACGATGCCCATGTaGTTGCTGCGGGAGGCATGG +
Preference number: 5 (lower is better)
Translates to: PTLPAGASRVFTAWLETAPTMPM*LLREAW
Trigger: CCATGCCTCCCGCAGCAACAACATGGGCATCGTTGG...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp TGGTCTTCGCTGGAACCAACAGGAGGGTCTGCTGGGGTCAGCAGGACAAGCCCTGCCCTCAATAGAGGCTaGCGCCTGCATCCGGGTCCT +
Preference number: 5 (lower is better)
Translates to: WSSLEPTGGSAGVSRTSPALNRG*RLHPGP
Trigger: AGGACCCGGATGCAGGCGCAAGCCTCTATTGAGGGC...AGGGCTTGTCCTGCTGACCCCAGCAGACCCTCCTGTTGGTTCCAGCGAAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGCATGAGCCCCAGCACTaGCCTTCTGTGCAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKHEPQH*PSVQPG
Trigger: GCCTGGCTGCACAGAAGGCAAGTGCTGGGGCTCATG...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTGTGGGGACAGTGAGTTaGGTTCTGAGGTGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: PTLPAGASRVFTAWLETAVGTVS*VLRWGP
Trigger: TGGGCCCCACCTCAGAACCAAACTCACTGTCCCCAC...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp AGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGCCGGGCCCACCTTCAAGGTTATaGAGGTTCCTCCCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: RWLHTPGCGPGSASPLPGPPSRL*RFLPLS
Trigger: AGAGAGAGGGAGGAACCTCAATAACCTTGAAGGTGG...GCCCGGCAGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS GCA 90 bp GGGTGCTCCACTGCCCTCACCACCGGGAGCAAGTTCCCTAAATGCTaGCGGTCCCGGGAAACTTGCATAAGACAAGCCTGGCCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: GCSTALTTGSKFPKC*RSRETCIRQAWPQL
Trigger: CAGCTGAGGCCAGGCTTGTCTTATGCAAGTTTCCCGGGACCGGCAGCATTTAGGGAACTTGCTCCCGGTGGTGAGGGCAGTGGAGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS GCA 90 bp GCTGGGTGCTCCACTGCCCTCACCACCGGGAGCAAGTTCCCTAAATaGTGCCGGTCCCGGGAAACTTGCATAAGACAAGCCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: AGCSTALTTGSKFPK*CRSRETCIRQAWPQ
Trigger: CTGAGGCCAGGCTTGTCTTATGCAAGTTTCCCGGGACCGGCAGCATTTAGGGAACTTGCTCCCGGTGGTGAGGGCAGTGGAGCACCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS CCA 90 bp TCCGGGTCTTCAGGACCTCCATTGGGTAGATGCTGCTCTGGGCGATaGCCCCTGCCAAGGACCCTGCCACAAGCCTCTCGTGAATCCTCA +
Preference number: 5 (lower is better)
Translates to: SGSSGPPLGRCCSGR*PLPRTLPQASRESS
Trigger: TGAGGATTCACGAGAGGCTTGTGGCAGGGTCCTTGGCAGGGGCCATCGCCCAGAGCAGCATCTACCCAATGGAGGTCCTGAAGACCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.10
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
ENST00000683206.1
CDS-3UTR CAA 90 bp GGGCCCATCCTGACAGGGTCCAGGCCAGCTCAGAGCACCATGAGCCCCAGCACTTGCTGTTCAGATATCTaGACTCCCAAGTCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: GPILTGSRPAQSTMSPSTCCSDI*TPKSRR
Trigger: CCTGCGGGACTTGGGAGTCAAGATATCTGAACAGCA...AGTGCTGGGGCTCATGGTGCTCTGAGCTGGCCTGGACCCTGTCAGGATGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCACGATGCCCATGTTGTaGCTGCGGGAGGCATGGACC +
Preference number: 5 (lower is better)
Translates to: AHSQNEMAAHPRLRPRISTMPML*LREAWT
Trigger: GGTCCATGCCTCCCGCAGCAACAACATGGGCATCGT...GCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACAGCCCTCAATAGAGGCTaGCGCCTGCATCCGGGTCCT +
Preference number: 5 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATALNRG*RLHPGP
Trigger: AGGACCCGGATGCAGGCGCAAGCCTCTATTGAGGGC...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGGTGGGGACAGTGAGTTaGGTTCTGAGGTGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLVGTVS*VLRWGP
Trigger: TGGGCCCCACCTCAGAACCAAACTCACTGTCCCCAC...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS TCA 90 bp GCCCCTTCGACTCAAAGTACTGGAACTCGGTCTGGGCTTCCCCGATaGCCGGCACATACAGGCACAGACAGAGCATGTTGGCGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: APSTQSTGTRSGLPR*PAHTGTDRACWRPA
Trigger: AGCAGGCCGCCAACATGCTCTGTCTGTGCCTGTATGTGCCGGTCATCGGGGAAGCCCAGACCGAGTTCCAGTACTTTGAGTCGAAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373064.9
ENST00000472769.5
ENST00000684304.1
CDS TCA 90 bp TGCCCCGCCAGAGTGACCTGGCCCCTCCTTCTCGAATCATCTGAGTaGAGCCACCAACGATGCCCATGTTGTTGCTGCGGGAGGCATGGA +
Preference number: 5 (lower is better)
Translates to: CPARVTWPLLLESSE*SHQRCPCCCCGRHG
Trigger: TCCATGCCTCCCGCAGCAACAACATGGGCATCGTTGGTGGCTTCACTCAGATGATTCGAGAAGGAGGGGCCAGGTCACTCTGGCGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.10
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
ENST00000683206.1
CDS TCA 90 bp CCATTGCCCCGCCAGAGTGACCTGGCCCCTCCTTCTCGAATCATCTaGGTGAAGCCACCAACGATGCCCATGTTGTTGCTGCGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: PLPRQSDLAPPSRII*VKPPTMPMLLLREA
Trigger: TGCCTCCCGCAGCAACAACATGGGCATCGTTGGTGGCTTCACTCAGATGATTCGAGAAGGAGGGGCCAGGTCACTCTGGCGGGGCAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.10
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
ENST00000683206.1
CDS GCA 90 bp CTTCAGGACCTCCATTGGGTAGATGCTGCTCTGGGCGATGGCCCCTaGCAAGGACCCTGCCACAAGCCTCTCGTGAATCCTCAGAGTCTC +
Preference number: 5 (lower is better)
Translates to: LQDLHWVDAALGDGP*QGPCHKPLVNPQSL
Trigger: GAGACTCTGAGGATTCACGAGAGGCTTGTGGCAGGGTCCTTGGCAGGGGCCATCGCCCAGAGCAGCATCTACCCAATGGAGGTCCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.10
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
ENST00000683206.1
CDS GCA 90 bp GCCACAGGCCAGGAGCACAAACACGCCGGGGTCCGCGCTGTTCACTaGATAGTGCTGCAGCCAGGCATTCTTGAGCGTCTAGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: ATGQEHKHAGVRAVH*IVLQPGILERLEGE
Trigger: TTCTCCTTCTAGACGCTCAAGAATGCCTGGCTGCAGCACTATGCAGTGAACAGCGCGGACCCCGGCGTGTTTGTGCTCCTGGCCTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682638.1
CDS-3UTR CAA 90 bp TGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGAACGATGCCCATGTTGTaGCTGCGGGAGGCATGGACC +
Preference number: 5 (lower is better)
Translates to: CWHIHRMRWLHTPGCGPGTMPML*LREAWT
Trigger: GGTCCATGCCTCCCGCAGCAACAACATGGGCATCGT...TCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACACCAACGATGCCCATGTaGTTGCTGCGGGAGGCATGG +
Preference number: 5 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATPTMPM*LLREAW
Trigger: CCATGCCTCCCGCAGCAACAACATGGGCATCGTTGG...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGGCCCTCAATAGAGGCTaGCGCCTGCATCCGGGTCCT +
Preference number: 5 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGALNRG*RLHPGP
Trigger: AGGACCCGGATGCAGGCGCAAGCCTCTATTGAGGGC...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGTCCCACTGGGCGGGCTaGGGAAGGTACAATCAACCA +
Preference number: 5 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRSHWAG*GRYNQP
Trigger: TGGTTGATTGTACCTTCCCAAGCCCGCCCAGTGGGA...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGGCCAGTTGGCCGGCATaGTTAAGCAAGGGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLASWPA*LSKGSR
Trigger: TCTGCTGCCCTTGCTTAACAATGCCGGCCAACTGGC...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS GCA 90 bp TTTGAGGGATGTGACCACAGTACCAACGCTCTCTGGCTACACAGCTaGTGGGAGGACGGGCCTGGGGTTCTCAGGCTGGAAGCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: FEGCDHSTNALWLHS*WEDGPGVLRLEALH
Trigger: ATGCAGAGCTTCCAGCCTGAGAACCCCAGGCCCGTCCTCCCAGCAGCTGTGTAGCCAGAGAGCGTTGGTACTGTGGTCACATCCCTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373066.9
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
CDS-3UTR CAA 90 bp CCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGCACAGACAGAGCATGTaGGCGGCCTGCTGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: PGRPRDLTFHHGLWDWTRHRQSM*AACWVL
Trigger: GAGCACCCAGCAGGCCGCCAACATGCTCTGTCTGTG...CCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR CAA 90 bp GCTCTCCCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGGATTCGGGGGCAATTTaGAGGACGTTGATGCCATTG +
Preference number: 5 (lower is better)
Translates to: ALPTLPAGASRVFTAWLEDSGAI*RTLMPL
Trigger: CAATGGCATCAACGTCCTCAAAATTGCCCCCGAATC...CTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGGGAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGATCAGCGAGTCCACTGTCCGCAGGATATGTTaGAAGAGGCTGCTCATGGTC +
Preference number: 5 (lower is better)
Translates to: QNEMAAHPRLRPRISESTVRRIC*KRLLMV
Trigger: GACCATGAGCAGCCTCTTCAAACATATCCTGCGGAC...AGTGGACTCGCTGATCCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR CAA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCACGTCAATGCTGTAGGTaGGGAAGTCAGGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPRQCCR*GSQAWE
Trigger: CTCCCAGGCCTGACTTCCCAACCTACAGCATTGACG...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACACGTCAATGCTGTAGGTaGGGAAGTCAGGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATRQCCR*GSQAWE
Trigger: CTCCCAGGCCTGACTTCCCAACCTACAGCATTGACG...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTGCTCATTTGTCCGGCTaGTCCTTCTGGACAAAACCC +
Preference number: 5 (lower is better)
Translates to: PTLPAGASRVFTAWLETAAHLSG*SFWTKP
Trigger: GGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGC...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCAGCCAGTTGGCCGGCATaGTTAAGCAAGGGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPASWPA*LSKGSR
Trigger: TCTGCTGCCCTTGCTTAACAATGCCGGCCAACTGGC...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGCCCACCGCCAGGTCGTaGACACACAGGCCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQPTARS*THRPPS
Trigger: GGACGGCGGCCTGTGTGTCAACGACCTGGCGGTGGG...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373068.6
CDS TCA 90 bp CGGGGTCCGCGCTGTTCACTGCATAGTGCTGCAGCCAGGCATTCTTaGGCGTCTAGAAGGAGAAGGGAGCATGGGATAAGCCCTAGGAAG +
Preference number: 5 (lower is better)
Translates to: RGPRCSLHSAAARHS*ASRRRREHGISPRK
Trigger: CTTCCTAGGGCTTATCCCATGCTCCCTTCTCCTTCTAGACGCTCAAGAATGCCTGGCTGCAGCACTATGCAGTGAACAGCGCGGACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682638.1
CDS GCA 90 bp ATGCTTCTGCTCCACTCTCAGAGCCACCATGGCAATCGACTTACATaGCAGAGCCACCACCTAGAACCCCAGGTGCTGGCCAGAACCCAG +
Preference number: 5 (lower is better)
Translates to: MLLLHSQSHHGNRLT*QSHHLEPQVLARTQ
Trigger: CTGGGTTCTGGCCAGCACCTGGGGTTCTAGGTGGTGGCTCTGGCATGTAAGTCGATTGCCATGGTGGCTCTGAGAGTGGAGCAGAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445012.2
CDS CCA 90 bp GCCCCAAGGACCCAAGATGCTTCTGCTCCACTCTCAGAGCCACCATaGCAATCGACTTACATGCCAGAGCCACCACCTAGAACCCCAGGT +
Preference number: 5 (lower is better)
Translates to: APRTQDASAPLSEPP*QSTYMPEPPPRTPG
Trigger: ACCTGGGGTTCTAGGTGGTGGCTCTGGCATGTAAGTCGATTGCCATGGTGGCTCTGAGAGTGGAGCAGAAGCATCTTGGGTCCTTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445012.2
CDS-3UTR CAA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTCCAACGATGCCCATGTaGTTGCTGCGGGAGGCATGG +
Preference number: 5 (lower is better)
Translates to: LPRLPLEAQKSLICPACPPTMPM*LLREAW
Trigger: CCATGCCTCCCGCAGCAACAACATGGGCATCGTTGG...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGGTCCGCAGGATATGTTaGAAGAGGCTGCTCATGGTC +
Preference number: 5 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRVRRIC*KRLLMV
Trigger: GACCATGAGCAGCCTCTTCAAACATATCCTGCGGAC...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
ENST00000466983.1
CDS-3UTR CAA 90 bp CCCTCGGTCCGCAGGATATGTTTGAAGAGGCTGCTCATGGTCACCTCCGGAGCGGTCCGCAGGATATGTTaGAAGAGGCTGCTCATGGTC +
Preference number: 5 (lower is better)
Translates to: PSVRRICLKRLLMVTSGAVRRIC*KRLLMV
Trigger: GACCATGAGCAGCCTCTTCAAACATATCCTGCGGAC...CGCTCCGGAGGTGACCATGAGCAGCCTCTTCAAACATATCCTGCGGACCGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS-3UTR CAA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGGCTCCAAGCTCGCTATaGGCAGGCACTGCAGAAAAT +
Preference number: 5 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLAPSSL*AGTAEN
Trigger: ATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGC...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAACGTCAATGCTGTAGGTaGGGAAGTCAGGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKRQCCR*GSQAWE
Trigger: CTCCCAGGCCTGACTTCCCAACCTACAGCATTGACG...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGTGGGGACAGTGAGTTaGGTTCTGAGGTGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHVGTVS*VLRWGP
Trigger: TGGGCCCCACCTCAGAACCAAACTCACTGTCCCCAC...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGGCTCATTTGTCCGGCTaGTCCTTCTGGACAAAACCC +
Preference number: 5 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLAHLSG*SFWTKP
Trigger: GGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGC...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGACAGAAGTCGCTCATTaGTCCGGCTTGTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: AGLQAPSSLLAGTAENVLTEVAH*SGLSFW
Trigger: CCAGAAGGACAAGCCGGACAAATGAGCGACTTCTGT...CAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CCCACCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTCCACCTTCAAGGTTATaGAGGTTCCTCCCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: PTLPAGASRVFTAWLETAPPSRL*RFLPLS
Trigger: AGAGAGAGGGAGGAACCTCAATAACCTTGAAGGTGG...AGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGGTTTCCCCAAAAAGCTaGCCATCTGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKVSPKS*PSGLSR
Trigger: CCTGGAGAGACCAGATGGCAAGCTTTTTGGGGAAAC...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS CCA 90 bp CAAGTCCTGCCAACAGCCAATGAACACAGAGCCCGGGGGAGAAGGTaGCATCAGGTTGCTCAAGTGAGAGGCACAAAGATCAGGGCTGAC +
Preference number: 5 (lower is better)
Translates to: QVLPTANEHRARGRR*HQVAQVRGTKIRAD
Trigger: GTCAGCCCTGATCTTTGTGCCTCTCACTTGAGCAACCTGATGCCACCTTCTCCCCCGGGCTCTGTGTTCATTGGCTGTTGGCAGGACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR CAA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTTGCTGTTCAGATATCTaGACTCCCAAGTCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSCCSDI*TPKSRR
Trigger: CCTGCGGGACTTGGGAGTCAAGATATCTGAACAGCA...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGGATTCGGGGGCAATTTaGAGGACGTTGATGCCATTG +
Preference number: 5 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKDSGAI*RTLMPL
Trigger: CAATGGCATCAACGTCCTCAAAATTGCCCCCGAATC...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTGCTCCAAGCTCGCTATaGGCAGGCACTGCAGAAAAT +
Preference number: 5 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSAPSSL*AGTAEN
Trigger: ATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGC...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGCCACATCATGGATTATGGGATaGGACGAGGGGGTGGGATGT +
Preference number: 5 (lower is better)
Translates to: QTLCPSPSNMVLHCPHATSWIMG*DEGVGC
Trigger: ACATCCCACCCCCTCGTCCAATCCCATAATCCATGA...TGTGGCATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTTCATGGATTATGGGATaGGACGAGGGGGTGGGATGT +
Preference number: 5 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSSWIMG*DEGVGC
Trigger: ACATCCCACCCCCTCGTCCAATCCCATAATCCATGA...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTCGTCAATGCTGTAGGTaGGGAAGTCAGGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: LPRLPLEAQKSLICPACPRQCCR*GSQAWE
Trigger: CTCCCAGGCCTGACTTCCCAACCTACAGCATTGACG...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTCATGAGCCCCAGCACTaGCCTTCTGTGCAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGIHEPQH*PSVQPG
Trigger: GCCTGGCTGCACAGAAGGCAAGTGCTGGGGCTCATG...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS TCA 90 bp TTTCCTGCTTTTTCAAATGTGCTAGCACTGCTGTCGTGCCCGGCCTaGGAAGTAGCTCACTCTAAGGGAGGCTTGCCAGGCTGCCGGCAA +
Preference number: 5 (lower is better)
Translates to: FPAFSNVLALLSCPA*EVAHSKGGLPGCRQ
Trigger: TTGCCGGCAGCCTGGCAAGCCTCCCTTAGAGTGAGCTACTTCTCAGGCCGGGCACGACAGCAGTGCTAGCACATTTGAAAAAGCAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373066.9
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
CDS CCA 90 bp CTTCTGTCTCCTTCCTTGGATCTGCAAATCCCCCTTGGTGCACAGTaGGCACTGGGGGTAGCAGGGAAACTGATTAACCGAGAAGCCGAG +
Preference number: 5 (lower is better)
Translates to: LLSPSLDLQIPLGAQ*ALGVAGKLINREAE
Trigger: CTCGGCTTCTCGGTTAATCAGTTTCCCTGCTACCCCCAGTGCCCACTGTGCACCAAGGGGGATTTGCAGATCCAAGGAAGGAGACAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000683206.1
CDS-3UTR CAA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATCATGGATTATGGGATaGGACGAGGGGGTGGGATGT +
Preference number: 5 (lower is better)
Translates to: EHTNALPFALKHGAPLPSSWIMG*DEGVGC
Trigger: ACATCCCACCCCCTCGTCCAATCCCATAATCCATGA...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCCATGAGCCCCAGCACTaGCCTTCTGTGCAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSHEPQH*PSVQPG
Trigger: GCCTGGCTGCACAGAAGGCAAGTGCTGGGGCTCATG...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GAACTAAGCCGGCCTCCAGGCTCCAAGCTCGCTATTGGCAGGCACTGCAGAAAAGCTCATTTGTCCGGCTaGTCCTTCTGGACAAAACCC +
Preference number: 5 (lower is better)
Translates to: ELSRPPGSKLAIGRHCRKAHLSG*SFWTKP
Trigger: GGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGC...TTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGCCTGGAGGCCGGCTTAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAATCCCACTGGGCGGGCTaGGGAAGGTACAATCAACCA +
Preference number: 5 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQSHWAG*GRYNQP
Trigger: TGGTTGATTGTACCTTCCCAAGCCCGCCCAGTGGGA...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTCCACCTTCAAGGTTATaGAGGTTCCTCCCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSPPSRL*RFLPLS
Trigger: AGAGAGAGGGAGGAACCTCAATAACCTTGAAGGTGG...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCACCACCTTCAAGGTTATaGAGGTTCCTCCCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPPPSRL*RFLPLS
Trigger: AGAGAGAGGGAGGAACCTCAATAACCTTGAAGGTGG...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTGGCGACTGTTCACTTTaGAGGGATGTGACCACAGTA +
Preference number: 5 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSGDCSL*RDVTTV
Trigger: TACTGTGGTCACATCCCTCAAAAGTGAACAGTCGCC...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR CAA 90 bp CACAGCCAAGTTGGCGTCAATGCTGTAGGTTGGGAAGTCAGGCCTGGGAGGCCAGGCGACTGTTCACTTTaGAGGGATGTGACCACAGTA +
Preference number: 5 (lower is better)
Translates to: HSQVGVNAVGWEVRPGRPGDCSL*RDVTTV
Trigger: TACTGTGGTCACATCCCTCAAAAGTGAACAGTCGCC...TGGCCTCCCAGGCCTGACTTCCCAACCTACAGCATTGACGCCAACTTGGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR CAA 90 bp AGATATCTTGACTCCCAAGTCCCGCAGGGACTGCATGATCTCCTGCGCGTCAATATCTGCAAATCCCCCTaGGTGCACAGTGGGCACTGC +
Preference number: 5 (lower is better)
Translates to: RYLDSQVPQGLHDLLRVNICKSP*VHSGHC
Trigger: GCAGTGCCCACTGTGCACCAAGGGGGATTTGCAGAT...ATTGACGCGCAGGAGATCATGCAGTCCCTGCGGGACTTGGGAGTCAAGATATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS GCA 90 bp TCACTAATTGCGAGCAGAGCTGGCCCCAAGGACCCAAGATGCTTCTaGTCCACTCTCAGAGCCACCATGGCAATCGACTTACATGCCAGA +
Preference number: 5 (lower is better)
Translates to: SLIASRAGPKDPRCF*STLRATMAIDLHAR
Trigger: TCTGGCATGTAAGTCGATTGCCATGGTGGCTCTGAGAGTGGAGCAGAAGCATCTTGGGTCCTTGGGGCCAGCTCTGCTCGCAATTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445012.2
CDS-3UTR CAA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGCCAACGATGCCCATGTaGTTGCTGCGGGAGGCATGG +
Preference number: 5 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQPTMPM*LLREAW
Trigger: CCATGCCTCCCGCAGCAACAACATGGGCATCGTTGG...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GAACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCAGATTCGGGGGCAATTTaGAGGACGTTGATGCCATTG +
Preference number: 5 (lower is better)
Translates to: EHTNALPFALKHGAPLPSDSGAI*RTLMPL
Trigger: CAATGGCATCAACGTCCTCAAAATTGCCCCCGAATC...TGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CTCCCTCGTCTTCCTCTGGAAGCACAGAAGTCGCTCATTTGTCCGGCTTGTCCTACAGAAGTCGCTCATTaGTCCGGCTTGTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LPRLPLEAQKSLICPACPTEVAH*SGLSFW
Trigger: CCAGAAGGACAAGCCGGACAAATGAGCGACTTCTGT...AGGACAAGCCGGACAAATGAGCGACTTCTGTGCTTCCAGAGGAAGACGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GGGTTGGACAGGAACCCCCAGGGCGTCAGAACAGACTCTGAGCAGTCAGCCAAGGTCCTTATCTCCAGCTaGTACAATTTTCTGGAGCTC +
Preference number: 5 (lower is better)
Translates to: GLDRNPQGVRTDSEQSAKVLISS*YNFLEL
Trigger: GAGCTCCAGAAAATTGTACAAGCTGGAGATAAGGAC...CTTGGCTGACTGCTCAGAGTCTGTTCTGACGCCCTGGGGGTTCCTGTCCAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373068.6
CDS-3UTR CAA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGTTTCCCCAAAAAGCTaGCCATCTGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHVSPKS*PSGLSR
Trigger: CCTGGAGAGACCAGATGGCAAGCTTTTTGGGGAAAC...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373066.9
ENST00000432073.6
CDS-3UTR CAA 90 bp TCTGCCTGCTGTTCAGATATCTTGACTCCCAAGTCCCGCAGGGACTGCATGATCGCATTCTCAAAGTGCTaGCTTCTGCCTCACAGGGCC +
Preference number: 5 (lower is better)
Translates to: SACCSDILTPKSRRDCMIAFSKC*LLPHRA
Trigger: GGCCCTGTGAGGCAGAAGCAAGCACTTTGAGAATGC...GATCATGCAGTCCCTGCGGGACTTGGGAGTCAAGATATCTGAACAGCAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS CCA 90 bp CCTTTCAAACCACGAGAAGGCCAAGTTCAGGGTCAGCCCAGGGAATaGCATCGGAGGGTTAGTCTCAGAGCCTTCCCTTCATCACACTTA +
Preference number: 5 (lower is better)
Translates to: PFKPREGQVQGQPRE*HRRVSLRAFPSSHL
Trigger: TAAGTGTGATGAAGGGAAGGCTCTGAGACTAACCCTCCGATGCCATTCCCTGGGCTGACCCTGAACTTGGCCTTCTCGTGGTTTGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684304.1
CDS-3UTR CAA 90 bp TCAAGGTCCTTATCTCCAGCTTGTACAATTTTCGCAGCTGGCTTCAACGCATTCCACAGACAGAGCATGTaGGCGGCCTGCTGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: SRSLSPACTIFAAGFNAFHRQSM*AACWVL
Trigger: GAGCACCCAGCAGGCCGCCAACATGCTCTGTCTGTG...GAATGCGTTGAAGCCAGCTGCGAAAATTGTACAAGCTGGAGATAAGGACCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR CAA 90 bp AAGCTCGCTATTGGCAGGCACTGCAGAAAATGTCCTGTCCTTACACATGTGAGCGCCAGTTGGCCGGCATaGTTAAGCAAGGGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: KLAIGRHCRKCPVLTHVSASWPA*LSKGSR
Trigger: TCTGCTGCCCTTGCTTAACAATGCCGGCCAACTGGC...GCTCACATGTGTAAGGACAGGACATTTTCTGCAGTGCCTGCCAATAGCGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS GCA 90 bp ATGACTTCACTAATTGCGAGCAGAGCTGGCCCCAAGGACCCAAGATaGTTCTGCTCCACTCTCAGAGCCACCATGGCAATCGACTTACAT +
Preference number: 5 (lower is better)
Translates to: MTSLIASRAGPKDPR*FCSTLRATMAIDLH
Trigger: ATGTAAGTCGATTGCCATGGTGGCTCTGAGAGTGGAGCAGAAGCATCTTGGGTCCTTGGGGCCAGCTCTGCTCGCAATTAGTGAAGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445012.2
CDS-3UTR CAA 90 bp TGCCTCCAGTCCCAAAAGGAATTTCTCTGGACAGATGTGACTGCAGCGGCCCAAGATTCGGGGGCAATTTaGAGGACGTTGATGCCATTG +
Preference number: 5 (lower is better)
Translates to: CLQSQKEFLWTDVTAAAQDSGAI*RTLMPL
Trigger: CAATGGCATCAACGTCCTCAAAATTGCCCCCGAATC...TTGGGCCGCTGCAGTCACATCTGTCCAGAGAAATTCCTTTTGGGACTGGAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp AAGTCAGGCCTGGGAGGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTACAGAAGTCGCTCATTaGTCCGGCTTGTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: KSGLGGHVTSPFIMDYGITEVAH*SGLSFW
Trigger: CCAGAAGGACAAGCCGGACAAATGAGCGACTTCTGT...AATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCCTCCCAGGCCTGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp TCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCTCCCACTGGGCGGGCTaGGGAAGGTACAATCAACCA +
Preference number: 5 (lower is better)
Translates to: SGLSFWTKPFSQQSIIKASHWAG*GRYNQP
Trigger: TGGTTGATTGTACCTTCCCAAGCCCGCCCAGTGGGA...GGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS TCA 90 bp AAATGCCACAGCATCTGCAACATCACGGTCTCCTCCAAACGCCTCTaGTGGCGACTGTTCACTTTTGAGGGATGTGACCACAGTACCAAC +
Preference number: 5 (lower is better)
Translates to: KCHSICNITVSSKRL*WRLFTFEGCDHSTN
Trigger: GTTGGTACTGTGGTCACATCCCTCAAAAGTGAACAGTCGCCATCAGAGGCGTTTGGAGGAGACCGTGATGTTGCAGATGCTGTGGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373066.9
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
CDS-3UTR CAA 90 bp GTGTTGGCACATTCACAGAATGAGATGGCTGCACACCCCAGGCTGCGGCCCAGGCTTCTTCTCATGATCTaGGAGATAATGGACAAATTC +
Preference number: 5 (lower is better)
Translates to: VLAHSQNEMAAHPRLRPRLLLMI*EIMDKF
Trigger: GAATTTGTCCATTATCTCCAAGATCATGAGAAGAAG...CCTGGGCCGCAGCCTGGGGTGTGCAGCCATCTCATTCTGTGAATGTGCCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGGTCCGCAGGATATGTTaGAAGAGGCTGCTCATGGTC +
Preference number: 5 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQVRRIC*KRLLMV
Trigger: GACCATGAGCAGCCTCTTCAAACATATCCTGCGGAC...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp CCCTCCCTGCGGGTGCGTCTAGGGTTTTCACAGCTTGGCTCGAGACAGCTTAGTGATCTTTGCATCCTATaGAAGATTTCCTCATCAGGT +
Preference number: 5 (lower is better)
Translates to: PSLRVRLGFSQLGSRQLSDLCIL*KISSSG
Trigger: ACCTGATGAGGAAATCTTCAATAGGATGCAAAGATC...ACTAAGCTGTCTCGAGCCAAGCTGTGAAAACCCTAGACGCACCCGCAGGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp TCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCTGCTGTTCAGATATCTaGACTCCCAAGTCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: SGLSFWTKPFSQQSIIKACCSDI*TPKSRR
Trigger: CCTGCGGGACTTGGGAGTCAAGATATCTGAACAGCA...GGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp AGGGACTGCATGATCTCCTGCGCGTCAATGCGTCCATCATTCTTTTTGTCCAAATGCTGTTCAGATATCTaGACTCCCAAGTCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: RDCMISCASMRPSFFLSKCCSDI*TPKSRR
Trigger: CCTGCGGGACTTGGGAGTCAAGATATCTGAACAGCA...TTTGGACAAAAAGAATGATGGACGCATTGACGCGCAGGAGATCATGCAGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR CAA 90 bp TCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGTCCATAATTAAGGCCGCTCCAAGCTCGCTATaGGCAGGCACTGCAGAAAAT +
Preference number: 5 (lower is better)
Translates to: SGLSFWTKPFSQQSIIKAAPSSL*AGTAEN
Trigger: ATTTTCTGCAGTGCCTGCCAATAGCGAGCTTGGAGC...GGCCTTAATTATGGACTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GGCCACGTGACCTCACCTTTCATCATGGATTATGGGATTGGACGAGGGGGTGGGGATCTTTGCATCCTATaGAAGATTTCCTCATCAGGT +
Preference number: 5 (lower is better)
Translates to: GHVTSPFIMDYGIGRGGGDLCIL*KISSSG
Trigger: ACCTGATGAGGAAATCTTCAATAGGATGCAAAGATC...CCCACCCCCTCGTCCAATCCCATAATCCATGATGAAAGGTGAGGTCACGTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp AACACACAAACGCTCTGCCCTTCGCCCTCAAACATGGTGCTCCACTGCCCTCATGATCTTTGCATCCTATaGAAGATTTCCTCATCAGGT +
Preference number: 5 (lower is better)
Translates to: NTQTLCPSPSNMVLHCPHDLCIL*KISSSG
Trigger: ACCTGATGAGGAAATCTTCAATAGGATGCAAAGATC...ATGAGGGCAGTGGAGCACCATGTTTGAGGGCGAAGGGCAGAGCGTTTGTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000432073.6
CDS-3UTR CAA 90 bp GAAGTCGCTCATTTGTCCGGCTTGTCCTTCTGGACAAAACCCTTTTCCCAACAGATGAAGACACTGAGCTaGAAAATGGACTTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: EVAHLSGLSFWTKPFSQQMKTLS*KMDFSS
Trigger: CGAGCTGAAGTCCATTTTCAAGCTCAGTGTCTTCAT...CTGTTGGGAAAAGGGTTTTGTCCAGAAGGACAAGCCGGACAAATGAGCGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS-3UTR CAA 90 bp TCAAGGTCCTTATCTCCAGCTTGTACAATTTTCGCAGCTGGCTTCAACGCATTCCTTCTGTCTCCTTCCTaGGATCTGCAAATCCCCCTT +
Preference number: 5 (lower is better)
Translates to: SRSLSPACTIFAAGFNAFLLSPS*DLQIPL
Trigger: AAGGGGGATTTGCAGATCCAAGGAAGGAGACAGAAG...GAATGCGTTGAAGCCAGCTGCGAAAATTGTACAAGCTGGAGATAAGGACCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR CAA 90 bp TCAAGGTCCTTATCTCCAGCTTGTACAATTTTCGCAGCTGGCTTCAACGCATTCGTCCTTATCTCCAGCTaGTACAATTTTCGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SRSLSPACTIFAAGFNAFVLISS*YNFRSW
Trigger: CCAGCTGCGAAAATTGTACAAGCTGGAGATAAGGAC...GAATGCGTTGAAGCCAGCTGCGAAAATTGTACAAGCTGGAGATAAGGACCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS-3UTR CAA 90 bp CTTGTACAATTTTCGCAGCTGGCTTCAACGCATTCTCAAAGTGCTTGCTTCTGCATGAAGACACTGAGCTaGAAAATGGACTTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: LVQFSQLASTHSQSACFCMKTLS*KMDFSS
Trigger: CGAGCTGAAGTCCATTTTCAAGCTCAGTGTCTTCAT...GCAGAAGCAAGCACTTTGAGAATGCGTTGAAGCCAGCTGCGAAAATTGTACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472769.5
CDS CCA 72 bp CGGACGCCGGCGATGAGGCAGACGAAGAGGCGGCGGTaGCGGCGGCGTCCGGCGGCGGGGAGGCCACACAGC +
Preference number: 6 (lower is better)
Translates to: RTPAMRQTKRRR*RRRPAAGRPHS
Trigger: GCTGTGTGGCCTCCCCGCCGCCGGACGCCGCCGCCACCGCCGCCTCTTCGTCTGCCTCATCGCCGGCGTCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373068.6
ENST00000373069.10
CDS GCA 72 bp CCGGCGGCGGGGAGGCCACACAGCGGCACAACACACTaGTCACCATCGGGCGCGAGGCAGGGGCTCCGGGCG +
Preference number: 6 (lower is better)
Translates to: PAAGRPHSGTTH*SPSGARQGLRA
Trigger: CGCCCGGAGCCCCTGCCTCGCGCCCGATGGTGAGCAGTGTGTTGTGCCGCTGTGTGGCCTCCCCGCCGCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373068.6
ENST00000373069.10
CDS CAA 72 bp TGCAGTCCCAGGCGCCGCAGCCCCACCGCCAGGTCGTaGACACACAGGCCGCCGTCCCGGTTGACGTCGAGC +
Preference number: 6 (lower is better)
Translates to: CSPRRRSPTARS*THRPPSRLTSS
Trigger: GCTCGACGTCAACCGGGACGGCGGCCTGTGTGTCAACGACCTGGCGGTGGGGCTGCGGCGCCTGGGACTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373068.6
ENST00000373069.10
CDS TCA 72 bp ACACACAGGCCGCCGTCCCGGTTGACGTCGAGCGTCTaGAAGAGTCTCCACAGGCGCAGCCGGTGGTCCGGG +
Preference number: 6 (lower is better)
Translates to: THRPPSRLTSSV*KSLHRRSRWSG
Trigger: CCCGGACCACCGGCTGCGCCTGTGGAGACTCTTTCAGACGCTCGACGTCAACCGGGACGGCGGCCTGTGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373068.6
ENST00000373069.10
CDS GCA 72 bp GCTTGTACAATTTTCTGGAGCTCGCCCTCGGTGCGGTaGAGTCCCAGGCGCCGCAGCCCCACCGCCAGGTCG +
Preference number: 6 (lower is better)
Translates to: ACTIFWSSPSVR*SPRRRSPTARS
Trigger: CGACCTGGCGGTGGGGCTGCGGCGCCTGGGACTGCACCGCACCGAGGGCGAGCTCCAGAAAATTGTACAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373068.6
ENST00000373069.10
CDS CAA 90 bp TGGGCTTCCCCGATGACCGGCACATACAGGCACAGACAGAGCATGTaGGCGGCCTGCTGGGTGCTCCACTGCCCTCACCACCGGGAGCAA +
Preference number: 6 (lower is better)
Translates to: WASPMTGTYRHRQSM*AACWVLHCPHHREQ
Trigger: TTGCTCCCGGTGGTGAGGGCAGTGGAGCACCCAGCAGGCCGCCAACATGCTCTGTCTGTGCCTGTATGTGCCGGTCATCGGGGAAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS TCA 72 bp TCAGGGCAGACACAGGCCCTGTTCCACAGCGATGTCTaGGAGTCGAGAAGGCGGGAGGCTCCCTCACCCCCA +
Preference number: 6 (lower is better)
Translates to: SGQTQALFHSDV*ESRRREAPSPP
Trigger: TGGGGGTGAGGGAGCCTCCCGCCTTCTCGACTCTCAGACATCGCTGTGGAACAGGGCCTGTGTCTGCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683206.1
CDS GCA 72 bp ACAGGCACAGACAGAGCATGTTGGCGGCCTGCTGGGTaGTCCACTGCCCTCACCACCGGGAGCAAGTTCCCT +
Preference number: 6 (lower is better)
Translates to: TGTDRACWRPAG*STALTTGSKFP
Trigger: AGGGAACTTGCTCCCGGTGGTGAGGGCAGTGGAGCACCCAGCAGGCCGCCAACATGCTCTGTCTGTGCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS GCA 72 bp GGCACATACAGGCACAGACAGAGCATGTTGGCGGCCTaGTGGGTGCTCCACTGCCCTCACCACCGGGAGCAA +
Preference number: 6 (lower is better)
Translates to: GTYRHRQSMLAA*WVLHCPHHREQ
Trigger: TTGCTCCCGGTGGTGAGGGCAGTGGAGCACCCAGCAGGCCGCCAACATGCTCTGTCTGTGCCTGTATGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS GCA 72 bp CCATCCGGGTCTTCAGGACCTCCATTGGGTAGATGCTaGTCTGGGCGATGGCCCCTGCCAAGGACCCTGCCA +
Preference number: 6 (lower is better)
Translates to: PSGSSGPPLGRC*SGRWPLPRTLP
Trigger: TGGCAGGGTCCTTGGCAGGGGCCATCGCCCAGAGCAGCATCTACCCAATGGAGGTCCTGAAGACCCGGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.10
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
ENST00000683206.1
CDS GCA 72 bp ACCGAGAAGCCGAGGTGGCAAGGGGCCTCCGGACTCTaGAGCTCGGCTTCCTCACTTTCAGGGCAGACACAG +
Preference number: 6 (lower is better)
Translates to: TEKPRWQGASGL*SSASSLSGQTQ
Trigger: CTGTGTCTGCCCTGAAAGTGAGGAAGCCGAGCTGCAGAGTCCGGAGGCCCCTTGCCACCTCGGCTTCTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683206.1
CDS CCA 72 bp TCAGGACCTCCATTGGGTAGATGCTGCTCTGGGCGATaGCCCCTGCCAAGGACCCTGCCACAAGCCTCTCGT +
Preference number: 6 (lower is better)
Translates to: SGPPLGRCCSGR*PLPRTLPQASR
Trigger: ACGAGAGGCTTGTGGCAGGGTCCTTGGCAGGGGCCATCGCCCAGAGCAGCATCTACCCAATGGAGGTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.10
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
ENST00000683206.1
CDS CCA 72 bp GACCACAGTACCAACGCTCTCTGGCTACACAGCTGCTaGGAGGACGGGCCTGGGGTTCTCAGGCTGGAAGCT +
Preference number: 6 (lower is better)
Translates to: DHSTNALWLHSC*EDGPGVLRLEA
Trigger: AGCTTCCAGCCTGAGAACCCCAGGCCCGTCCTCCCAGCAGCTGTGTAGCCAGAGAGCGTTGGTACTGTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373066.9
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
CDS GCA 72 bp CAGGAGCACAAACACGCCGGGGTCCGCGCTGTTCACTaGATAGTGCTGCAGCCAGGCATTCTTGAGCGTCTC +
Preference number: 6 (lower is better)
Translates to: QEHKHAGVRAVH*IVLQPGILERL
Trigger: GAGACGCTCAAGAATGCCTGGCTGCAGCACTATGCAGTGAACAGCGCGGACCCCGGCGTGTTTGTGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.10
ENST00000432073.6
ENST00000466983.1
ENST00000682371.1
ENST00000683206.1
CDS GCA 72 bp GCTCATGGTCACCTCCGGAGCGCCCTCAATAGAGGCTaGAGGATGGAGGCCACCAGTCAGATGCTTCTGTCC +
Preference number: 6 (lower is better)
Translates to: AHGHLRSALNRG*RMEATSQMLLS
Trigger: GGACAGAAGCATCTGACTGGTGGCCTCCATCCTGCAGCCTCTATTGAGGGCGCTCCGGAGGTGACCATGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466983.1
CDS CCA 72 bp TTCAGCTCGGCAGGGAGCCCCTTCGACTCAAAGTACTaGAACTCGGTCTGGGCTTCCCCGATGACCGGCACA +
Preference number: 6 (lower is better)
Translates to: FSSAGSPFDSKY*NSVWASPMTGT
Trigger: TGTGCCGGTCATCGGGGAAGCCCAGACCGAGTTCCAGTACTTTGAGTCGAAGGGGCTCCCTGCCGAGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373064.9
ENST00000472769.5
ENST00000684304.1
CDS TCA 72 bp AAAAGCCCTCCCACGGCAAGTCCTGCCAACAGCCAATaGACACAGAGCCCGGGGGAGAAGGTGGCATCAGGT +
Preference number: 6 (lower is better)
Translates to: KSPPTASPANSQ*TQSPGEKVASG
Trigger: ACCTGATGCCACCTTCTCCCCCGGGCTCTGTGTTCATTGGCTGTTGGCAGGACTTGCCGTGGGAGGGCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS GCA 72 bp CAGGAGCACAAACACGCCGGGGTCCGCGCTGTTCACTaGATAGTGCTGCAGCCAGGCATTCTTGAGCGTCTA +
Preference number: 6 (lower is better)
Translates to: QEHKHAGVRAVH*IVLQPGILERL
Trigger: TAGACGCTCAAGAATGCCTGGCTGCAGCACTATGCAGTGAACAGCGCGGACCCCGGCGTGTTTGTGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682638.1
CDS CCA 72 bp GGGAGCCCCTTCGACTCAAAGTACTGGAACTCGGTCTaGGCTTCCCCGATGACCGGCACATACAGGCACAGA +
Preference number: 6 (lower is better)
Translates to: GSPFDSKYWNSV*ASPMTGTYRHR
Trigger: TCTGTGCCTGTATGTGCCGGTCATCGGGGAAGCCCAGACCGAGTTCCAGTACTTTGAGTCGAAGGGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373064.9
ENST00000472769.5
ENST00000684304.1
CDS CCA 72 bp GGGCTCCTAGCCTGGCTGCCCTGTTTCTGCTGTCACTaGGAATTCCGGGACAAGGTAGAGGGAACACCTCCT +
Preference number: 6 (lower is better)
Translates to: GLLAWLPCFCCH*EFRDKVEGTPP
Trigger: AGGAGGTGTTCCCTCTACCTTGTCCCGGAATTCCCAGTGACAGCAGAAACAGGGCAGCCAGGCTAGGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682638.1
CDS GCA 72 bp ACTGCCCTCACCACCGGGAGCAAGTTCCCTAAATGCTaGCGGTCCCGGGAAACTTGCATAAGACAAGCCTGG +
Preference number: 6 (lower is better)
Translates to: TALTTGSKFPKC*RSRETCIRQAW
Trigger: CCAGGCTTGTCTTATGCAAGTTTCCCGGGACCGGCAGCATTTAGGGAACTTGCTCCCGGTGGTGAGGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS GCA 72 bp GCGAGCAGAGCTGGCCCCAAGGACCCAAGATGCTTCTaGTCCACTCTCAGAGCCACCATGGCAATCGACTTA +
Preference number: 6 (lower is better)
Translates to: ASRAGPKDPRCF*STLRATMAIDL
Trigger: TAAGTCGATTGCCATGGTGGCTCTGAGAGTGGAGCAGAAGCATCTTGGGTCCTTGGGGCCAGCTCTGCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445012.2
CDS GCA 72 bp GAGCAGGAAGGAGGCGCAGTCTTTGATGCAGTTTCCTaGACTAACCACGCGTCCGTCAAGGAGGGAGACAGC +
Preference number: 6 (lower is better)
Translates to: EQEGGAVFDAVS*TNHASVKEGDS
Trigger: GCTGTCTCCCTCCTTGACGGACGCGTGGTTAGTGCAGGAAACTGCATCAAAGACTGCGCCTCCTTCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682638.1
CDS CCA 72 bp CCACGAGAAGGCCAAGTTCAGGGTCAGCCCAGGGAATaGCATCGGAGGGTTAGTCTCAGAGCCTTCCCTTCA +
Preference number: 6 (lower is better)
Translates to: PREGQVQGQPRE*HRRVSLRAFPS
Trigger: TGAAGGGAAGGCTCTGAGACTAACCCTCCGATGCCATTCCCTGGGCTGACCCTGAACTTGGCCTTCTCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684304.1
CDS TCA 72 bp AGAGTGACCTGGCCCCTCCTTCTCGAATCATCTGAGTaGAGCCACCAACGATGCCCATGTTGTTGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: RVTWPLLLESSE*SHQRCPCCCCG
Trigger: CCCGCAGCAACAACATGGGCATCGTTGGTGGCTTCACTCAGATGATTCGAGAAGGAGGGGCCAGGTCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.10
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
ENST00000683206.1
CDS TCA 72 bp CGCCAGAGTGACCTGGCCCCTCCTTCTCGAATCATCTaGGTGAAGCCACCAACGATGCCCATGTTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: RQSDLAPPSRII*VKPPTMPMLLL
Trigger: CAGCAACAACATGGGCATCGTTGGTGGCTTCACTCAGATGATTCGAGAAGGAGGGGCCAGGTCACTCTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000373064.9
ENST00000373066.9
ENST00000373068.6
ENST00000373069.10
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
ENST00000683206.1
CDS GCA 72 bp CTCAGGCTGGAAGCTCTGCATGCAGGGGCGGTTTCCTaGTTTTTCAAATGTGCTAGCACTGCTGTCGTGCCC +
Preference number: 6 (lower is better)
Translates to: LRLEALHAGAVS*FFKCASTAVVP
Trigger: GGGCACGACAGCAGTGCTAGCACATTTGAAAAAGCAGGAAACCGCCCCTGCATGCAGAGCTTCCAGCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373066.9
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
CDS GCA 72 bp CTAATTGCGAGCAGAGCTGGCCCCAAGGACCCAAGATaGTTCTGCTCCACTCTCAGAGCCACCATGGCAATC +
Preference number: 6 (lower is better)
Translates to: LIASRAGPKDPR*FCSTLRATMAI
Trigger: GATTGCCATGGTGGCTCTGAGAGTGGAGCAGAAGCATCTTGGGTCCTTGGGGCCAGCTCTGCTCGCAATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445012.2
CDS TCA 72 bp ACTCAAAGTACTGGAACTCGGTCTGGGCTTCCCCGATaGCCGGCACATACAGGCACAGACAGAGCATGTTGG +
Preference number: 6 (lower is better)
Translates to: TQSTGTRSGLPR*PAHTGTDRACW
Trigger: CCAACATGCTCTGTCTGTGCCTGTATGTGCCGGTCATCGGGGAAGCCCAGACCGAGTTCCAGTACTTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373064.9
ENST00000472769.5
ENST00000684304.1
CDS TCA 72 bp TTTTCAAATGTGCTAGCACTGCTGTCGTGCCCGGCCTaGGAAGTAGCTCACTCTAAGGGAGGCTTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: FSNVLALLSCPA*EVAHSKGGLPG
Trigger: GCCTGGCAAGCCTCCCTTAGAGTGAGCTACTTCTCAGGCCGGGCACGACAGCAGTGCTAGCACATTTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373066.9
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
CDS CCA 72 bp CCAACAGCCAATGAACACAGAGCCCGGGGGAGAAGGTaGCATCAGGTTGCTCAAGTGAGAGGCACAAAGATC +
Preference number: 6 (lower is better)
Translates to: PTANEHRARGRR*HQVAQVRGTKI
Trigger: GATCTTTGTGCCTCTCACTTGAGCAACCTGATGCCACCTTCTCCCCCGGGCTCTGTGTTCATTGGCTGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS CCA 72 bp TCCCCAGGCAATGACTTCACTAATTGCGAGCAGAGCTaGCCCCAAGGACCCAAGATGCTTCTGCTCCACTCT +
Preference number: 6 (lower is better)
Translates to: SPGNDFTNCEQS*PQGPKMLLLHS
Trigger: AGAGTGGAGCAGAAGCATCTTGGGTCCTTGGGGCCAGCTCTGCTCGCAATTAGTGAAGTCATTGCCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445012.2
CDS CCA 72 bp CCTTCCTTGGATCTGCAAATCCCCCTTGGTGCACAGTaGGCACTGGGGGTAGCAGGGAAACTGATTAACCGA +
Preference number: 6 (lower is better)
Translates to: PSLDLQIPLGAQ*ALGVAGKLINR
Trigger: TCGGTTAATCAGTTTCCCTGCTACCCCCAGTGCCCACTGTGCACCAAGGGGGATTTGCAGATCCAAGGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000683206.1
CDS CAA 72 bp TGCTTCCGAGAAGACAGCCCCTCAGGATTTGAAAGCTaGAATGCCGCTGAGGGCACCTCCCACTCCAGAGTA +
Preference number: 6 (lower is better)
Translates to: CFREDSPSGFES*NAAEGTSHSRV
Trigger: TACTCTGGAGTGGGAGGTGCCCTCAGCGGCATTCAAGCTTTCAAATCCTGAGGGGCTGTCTTCTCGGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682371.1
CDS TCA 72 bp CGCTGTTCACTGCATAGTGCTGCAGCCAGGCATTCTTaGGCGTCTAGAAGGAGAAGGGAGCATGGGATAAGC +
Preference number: 6 (lower is better)
Translates to: RCSLHSAAARHS*ASRRRREHGIS
Trigger: GCTTATCCCATGCTCCCTTCTCCTTCTAGACGCTCAAGAATGCCTGGCTGCAGCACTATGCAGTGAACAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682638.1
CDS GCA 72 bp AGCAAGTTCCCTAAATGCTGCCGGTCCCGGGAAACTTaGATAAGACAAGCCTGGCCTCAGCTGTCATTGGCT +
Preference number: 6 (lower is better)
Translates to: SKFPKCCRSRET*IRQAWPQLSLA
Trigger: AGCCAATGACAGCTGAGGCCAGGCTTGTCTTATGCAAGTTTCCCGGGACCGGCAGCATTTAGGGAACTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373064.9
CDS GCA 72 bp TGGCACCCAGCCCTGGGGAAAAAGCTAGCTAGGAAATaGCACAGCATCTGCAACATCACGGTCTCCTCCAAA +
Preference number: 6 (lower is better)
Translates to: WHPALGKKLARK*HSICNITVSSK
Trigger: TTTGGAGGAGACCGTGATGTTGCAGATGCTGTGGCATTTCCTAGCTAGCTTTTTCCCCAGGGCTGGGTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373066.9
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
CDS CCA 72 bp ACCCAAGATGCTTCTGCTCCACTCTCAGAGCCACCATaGCAATCGACTTACATGCCAGAGCCACCACCTAGA +
Preference number: 6 (lower is better)
Translates to: TQDASAPLSEPP*QSTYMPEPPPR
Trigger: TCTAGGTGGTGGCTCTGGCATGTAAGTCGATTGCCATGGTGGCTCTGAGAGTGGAGCAGAAGCATCTTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445012.2
CDS CAA 72 bp TCTCCTCCAAACGCCTCTGATGGCGACTGTTCACTTTaGAGGGATGTGACCACAGTACCAACGCTCTCTGGC +
Preference number: 6 (lower is better)
Translates to: SPPNASDGDCSL*RDVTTVPTLSG
Trigger: GCCAGAGAGCGTTGGTACTGTGGTCACATCCCTCAAAAGTGAACAGTCGCCATCAGAGGCGTTTGGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373066.9
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
CDS CAA 90 bp ACATCACGGTCTCCTCCAAACGCCTCTGATGGCGACTGTTCACTTTaGAGGGATGTGACCACAGTACCAACGCTCTCTGGCTACACAGCT +
Preference number: 6 (lower is better)
Translates to: TSRSPPNASDGDCSL*RDVTTVPTLSGYTA
Trigger: AGCTGTGTAGCCAGAGAGCGTTGGTACTGTGGTCACATCCCTCAAAAGTGAACAGTCGCCATCAGAGGCGTTTGGAGGAGACCGTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373066.9
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
CDS CAA 90 bp AAGGAAAGCTGCAGTAAACAGAAGAGCAGGAAGGAGGCGCAGTCTTaGATGCAGTTTCCTGCACTAACCACGCGTCCGTCAAGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: KESCSKQKSRKEAQS*MQFPALTTRPSRRE
Trigger: CTCCCTCCTTGACGGACGCGTGGTTAGTGCAGGAAACTGCATCAAAGACTGCGCCTCCTTCCTGCTCTTCTGTTTACTGCAGCTTTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682638.1
CDS TCA 72 bp AGCATCTGCAACATCACGGTCTCCTCCAAACGCCTCTaGTGGCGACTGTTCACTTTTGAGGGATGTGACCAC +
Preference number: 6 (lower is better)
Translates to: SICNITVSSKRL*WRLFTFEGCDH
Trigger: GTGGTCACATCCCTCAAAAGTGAACAGTCGCCATCAGAGGCGTTTGGAGGAGACCGTGATGTTGCAGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373066.9
ENST00000432073.6
ENST00000682371.1
ENST00000682638.1
CDS CAA 72 bp TGCAGTAAACAGAAGAGCAGGAAGGAGGCGCAGTCTTaGATGCAGTTTCCTGCACTAACCACGCGTCCGTCA +
Preference number: 6 (lower is better)
Translates to: CSKQKSRKEAQS*MQFPALTTRPS
Trigger: TGACGGACGCGTGGTTAGTGCAGGAAACTGCATCAAAGACTGCGCCTCCTTCCTGCTCTTCTGTTTACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682638.1
CDS CAA 90 bp AATTCTCTGTGCTTCCGAGAAGACAGCCCCTCAGGATTTGAAAGCTaGAATGCCGCTGAGGGCACCTCCCACTCCAGAGTAATGGCTTTC +
Preference number: 6 (lower is better)
Translates to: NSLCFREDSPSGFES*NAAEGTSHSRVMAF
Trigger: GAAAGCCATTACTCTGGAGTGGGAGGTGCCCTCAGCGGCATTCAAGCTTTCAAATCCTGAGGGGCTGTCTTCTCGGAAGCACAGAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682371.1
CDS GCA 72 bp ATCTCCAGCTTGTACAATTTTCTTAGGAAACTGCTCTaGAGGTCCAACCACCAGCAAAATGGTGGGTCTTTT +
Preference number: 6 (lower is better)
Translates to: ISSLYNFLRKLL*RSNHQQNGGSF
Trigger: AAAAGACCCACCATTTTGCTGGTGGTTGGACCTGCAGAGCAGTTTCCTAAGAAAATTGTACAAGCTGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373066.9
ENST00000432073.6
ENST00000682638.1