RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC25A24 (Homo sapiens)

Ensembl gene IDs: ENSG00000085491

Ensembl transcript IDs: ENST00000264128.13, ENST00000370041.4, ENST00000565488.6, ENST00000569674.1, ENST00000639032.1, ENST00000639606.1, ENST00000640018.1, ENST00000640416.2, ENST00000648874.1, ENST00000649955.1

Found 566 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCGGTCGCGGCCCCACGCCCGAGTTTCTGAAGCCACCGGAGCGCTaGGCGCCACAGTTCCTCCTTCCTCTCCTGGCAACGCCTCAAGCC +
Preference number: 1 (lower is better)
Translates to: AGRGPTPEFLKPPER*APQFLLPLLATPQA
Trigger: GGCTTGAGGCGTTGCCAGGAGAGGAAGGAGGAACTGTGGCGCCCAGCGCTCCGGTGGCTTCAGAAACTCGGGCGTGGGGCCGCGACCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR TCA 90 bp CTTCTGTTACCGGGGTCGCCGGTCGCGGCCCCACGCCCGAGTTTCTaGAGCCACCGGAGCGCTGGGCGCCACAGTTCCTCCTTCCTCTCC +
Preference number: 1 (lower is better)
Translates to: LLLPGSPVAAPRPSF*SHRSAGRHSSSFLS
Trigger: GGAGAGGAAGGAGGAACTGTGGCGCCCAGCGCTCCGGTGGCTTCAGAAACTCGGGCGTGGGGCCGCGACCGGCGACCCCGGTAACAGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR GCA 90 bp TGGCATCTGCTGATGCACTGCAGCAAGGTCGTCCCTTTCCTGGGCTaGTTCCAGCCAATGATTGGACATGGTGGGGAACTCCAACTGGGC +
Preference number: 1 (lower is better)
Translates to: WHLLMHCSKVVPFLG*FQPMIGHGGELQLG
Trigger: GCCCAGTTGGAGTTCCCCACCATGTCCAATCATTGGCTGGAAGCAGCCCAGGAAAGGGACGACCTTGCTGCAGTGCATCAGCAGATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR GCA 90 bp GGCCCTCATAGTAACCTAATCACTTTCCCTCTTTGGATAAGAGAATaGCAGTGTCAGGGAACGCTTCAACAGGGTTGGAGAAGTTCCACA +
Preference number: 1 (lower is better)
Translates to: GPHSNLITFPLWIRE*QCQGTLQQGWRSST
Trigger: TGTGGAACTTCTCCAACCCTGTTGAAGCGTTCCCTGACACTGGCATTCTCTTATCCAAAGAGGGAAAGTGATTAGGTTACTATGAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR CCA 90 bp CTTTGGATAAGAGAATGCCAGTGTCAGGGAACGCTTCAACAGGGTTaGAGAAGTTCCACATATCTCCACCCTACTAAAGGGGCAGAAGTT +
Preference number: 1 (lower is better)
Translates to: LWIRECQCQGTLQQG*RSSTYLHPTKGAEV
Trigger: AACTTCTGCCCCTTTAGTAGGGTGGAGATATGTGGAACTTCTCCAACCCTGTTGAAGCGTTCCCTGACACTGGCATTCTCTTATCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR CCA 90 bp ATAACAGTTGTTGGCCCTCATAGTAACCTAATCACTTTCCCTCTTTaGATAAGAGAATGCCAGTGTCAGGGAACGCTTCAACAGGGTTGG +
Preference number: 1 (lower is better)
Translates to: ITVVGPHSNLITFPL*IRECQCQGTLQQGW
Trigger: CCAACCCTGTTGAAGCGTTCCCTGACACTGGCATTCTCTTATCCAAAGAGGGAAAGTGATTAGGTTACTATGAGGGCCAACAACTGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR GCA 90 bp TCACCTTGTGTCAAAATGCATCATACAGACAATATCTACAAGGGCTaGTCAGGAAAGGCCAAAATGTTTGGAAAGACTACATGGAGCCAG +
Preference number: 1 (lower is better)
Translates to: SPCVKMHHTDNIYKG*SGKAKMFGKTTWSQ
Trigger: CTGGCTCCATGTAGTCTTTCCAAACATTTTGGCCTTTCCTGAGCAGCCCTTGTAGATATTGTCTGTATGATGCATTTTGACACAAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
3UTR CCA 90 bp TACAGACAATATCTACAAGGGCTGCTCAGGAAAGGCCAAAATGTTTaGAAAGACTACATGGAGCCAGCTGTAAAAAGCATGATTCAAACT +
Preference number: 1 (lower is better)
Translates to: YRQYLQGLLRKGQNV*KDYMEPAVKSMIQT
Trigger: AGTTTGAATCATGCTTTTTACAGCTGGCTCCATGTAGTCTTTCCAAACATTTTGGCCTTTCCTGAGCAGCCCTTGTAGATATTGTCTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
3UTR-3UTR TCA 90 bp AAGGCACCTACTGTGAGGAACACAGTTGACTTCCACTCTCTAGCCTCTAACCCTCCACGCCCGAGTTTCTaGAGCCACCGGAGCGCTGGG +
Preference number: 2 (lower is better)
Translates to: KAPTVRNTVDFHSLASNPPRPSF*SHRSAG
Trigger: CCCAGCGCTCCGGTGGCTTCAGAAACTCGGGCGTGG...AGGGTTAGAGGCTAGAGAGTGGAAGTCAACTGTGTTCCTCACAGTAGGTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR-3UTR CCA 90 bp TTAACAGTGCCCGTGGGCCAGAGTGTCCACAACACTCATTTTATCTGGACAAATTCCTCCTTCCTCTCCTaGCAACGCCTCAAGCCGCCG +
Preference number: 2 (lower is better)
Translates to: LTVPVGQSVHNTHFIWTNSSFLS*QRLKPP
Trigger: CGGCGGCTTGAGGCGTTGCCAGGAGAGGAAGGAGGA...ATTTGTCCAGATAAAATGAGTGTTGTGGACACTCTGGCCCACGGGCACTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR-3UTR CCA 90 bp CAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGACCCACTAAGCCACCGGAGCGCTaGGCGCCACAGTTCCTCCTT +
Preference number: 2 (lower is better)
Translates to: QLRKRSNVCAFIQNLGPTKPPER*APQFLL
Trigger: AAGGAGGAACTGTGGCGCCCAGCGCTCCGGTGGCTT...AGTGGGTCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR-3UTR TCA 90 bp CCTTTCCTGGGCTGCTTCCAGCCAATGATTGGACATGGTGGGGAACTCCAACTGGGACCCACTGAAGTCTaGCAGCTAAAACGGATTACA +
Preference number: 2 (lower is better)
Translates to: PFLGCFQPMIGHGGELQLGPTEV*QLKRIT
Trigger: TGTAATCCGTTTTAGCTGTCAGACTTCAGTGGGTCC...CAGTTGGAGTTCCCCACCATGTCCAATCATTGGCTGGAAGCAGCCCAGGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR-3UTR TCA 90 bp CCTTTCCTGGGCTGCTTCCAGCCAATGATTGGACATGGTGGGGAACTCCAACTGAAACTTGGGACCCACTaGAGTCTGACAGCTAAAACG +
Preference number: 2 (lower is better)
Translates to: PFLGCFQPMIGHGGELQLKLGTH*SLTAKT
Trigger: CGTTTTAGCTGTCAGACTTCAGTGGGTCCCAAGTTT...CAGTTGGAGTTCCCCACCATGTCCAATCATTGGCTGGAAGCAGCCCAGGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR-3UTR GCA 90 bp CCTTTCCTGGGCTGCTTCCAGCCAATGATTGGACATGGTGGGGAACTCCAACTGCTTTGGATAAGAGAATaGCAGTGTCAGGGAACGCTT +
Preference number: 2 (lower is better)
Translates to: PFLGCFQPMIGHGGELQLLWIRE*QCQGTL
Trigger: AAGCGTTCCCTGACACTGGCATTCTCTTATCCAAAG...CAGTTGGAGTTCCCCACCATGTCCAATCATTGGCTGGAAGCAGCCCAGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR-3UTR GCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCCCAGCTGACCACAGGTaGTGGATAAGGCACCGCATC +
Preference number: 2 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFPADHR*WIRHRI
Trigger: GATGCGGTGCCTTATCCAGCACCTGTGGTCAGCTGG...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR CCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCGCTGACCACAGGTGCTaGATAAGGCACCGCATCCCA +
Preference number: 2 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFADHRC*IRHRIP
Trigger: TGGGATGCGGTGCCTTATCCAGCACCTGTGGTCAGC...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR CCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCAAGCCAATGGGTAGCTaGCCAGCTGACCACAGGTGC +
Preference number: 2 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFKPMGS*PADHRC
Trigger: GCACCTGTGGTCAGCTGGCCAGCTACCCATTGGCTT...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR TCA 90 bp AAGGCACCTACTGTGAGGAACACAGTTGACTTCCACTCTCTAGCCTCTAACCCTGGACCCACTGAAGTCTaGCAGCTAAAACGGATTACA +
Preference number: 2 (lower is better)
Translates to: KAPTVRNTVDFHSLASNPGPTEV*QLKRIT
Trigger: TGTAATCCGTTTTAGCTGTCAGACTTCAGTGGGTCC...AGGGTTAGAGGCTAGAGAGTGGAAGTCAACTGTGTTCCTCACAGTAGGTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR-3UTR GCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCACCAGCAATGCCTCCTaGCAAAAGCTGCCTCCACCA +
Preference number: 2 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFTSNAS*QKLPPP
Trigger: TGGTGGAGGCAGCTTTTGGCAGGAGGCATTGCTGGT...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264128.13
ENST00000639606.1
3UTR-3UTR GCA 90 bp AACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGAACCAGCAATGCCTCCTaGCAAAAGCTGCCTCCACCA +
Preference number: 2 (lower is better)
Translates to: NLHWIYKSLCSCSSHGTRTSNAS*QKLPPP
Trigger: TGGTGGAGGCAGCTTTTGGCAGGAGGCATTGCTGGT...TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264128.13
ENST00000639606.1
3UTR-3UTR GCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTCCTCCTGCCAAAAGCTaGCTCCACCATTGTCCGGAT +
Preference number: 2 (lower is better)
Translates to: VQASTFSDFGFRAEICRIPPAKS*LHHCPD
Trigger: ATCCGGACAATGGTGGAGGCAGCTTTTGGCAGGAGG...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264128.13
ENST00000639606.1
3UTR-3UTR GCA 90 bp CTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGAAATGGTCCAAAGGGGCAGTaGTTGTTCGAGAGACAGCAC +
Preference number: 2 (lower is better)
Translates to: LHWIYKSLCSCSSHGTRNGPKGQ*LFERQH
Trigger: GTGCTGTCTCTCGAACAAGCACTGCCCCTTTGGACC...ATTTCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264128.13
ENST00000639606.1
3UTR-3UTR GCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTACCAGCTGACCACAGGTaGTGGATAAGGCACCGCATC +
Preference number: 2 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLPADHR*WIRHRI
Trigger: GATGCGGTGCCTTATCCAGCACCTGTGGTCAGCTGG...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR GCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCTGGCTTGAGCCTGCATaGGAGTTCTCACCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFWLEPA*EFSPKP
Trigger: TGGCTTTGGTGAGAACTCGCATGCAGGCTCAAGCCA...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR GCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTAGACAGCACCAGCAATaGCTCCTGCCAAAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLRQHQQ*LLPKAA
Trigger: GGCAGCTTTTGGCAGGAGGCATTGCTGGTGCTGTCT...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264128.13
ENST00000639606.1
3UTR-3UTR GCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAGGTCCAAAGGGGCAGTaGTTGTTCGAGAGACAGCAC +
Preference number: 2 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLGPKGQ*LFERQH
Trigger: GTGCTGTCTCTCGAACAAGCACTGCCCCTTTGGACC...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264128.13
ENST00000639606.1
3UTR-3UTR CCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAGCTGACCACAGGTGCTaGATAAGGCACCGCATCCCA +
Preference number: 2 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVEADHRC*IRHRIP
Trigger: TGGGATGCGGTGCCTTATCCAGCACCTGTGGTCAGC...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR TCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCCATAAACCACATAACTaGTGCCTACAGCAGGGAGCA +
Preference number: 2 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFHKPHN*CLQQGA
Trigger: TGCTCCCTGCTGTAGGCATCAGTTATGTGGTTTATG...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR GCA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCCCTCCTGCCAAAAGCTaGCTCCACCATTGTCCGGAT +
Preference number: 2 (lower is better)
Translates to: PAAFQSNGRINGIFQINCPPAKS*LHHCPD
Trigger: ATCCGGACAATGGTGGAGGCAGCTTTTGGCAGGAGG...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264128.13
ENST00000639606.1
3UTR-3UTR CCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTAAGCCAATGGGTAGCTaGCCAGCTGACCACAGGTGC +
Preference number: 2 (lower is better)
Translates to: KGKQRCSAEADTSQRISFKPMGS*PADHRC
Trigger: GCACCTGTGGTCAGCTGGCCAGCTACCCATTGGCTT...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR CCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTTCTCACCAAAGCCAATaGGTAGCTGGCCAGCTGACC +
Preference number: 2 (lower is better)
Translates to: RTKENKDALQKLIQVKGFSHQSQ*VAGQLT
Trigger: GGTCAGCTGGCCAGCTACCCATTGGCTTTGGTGAGA...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR TCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGCGTGAACCTGCATCATaGTTTTCAGACGGTCCAAAG +
Preference number: 2 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRREPAS*FSDGPK
Trigger: CTTTGGACCGTCTGAAAATCATGATGCAGGTTCACG...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264128.13
ENST00000639606.1
3UTR-3UTR GCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTAGTACTGCCCAGTTTTaGCTACAGCCAGCCTGGTTT +
Preference number: 2 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLSTAQF*LQPAWF
Trigger: AAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACT...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR TCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTTCTAACATGGCTTaGGCCTGCATGCGAGTTCTC +
Preference number: 2 (lower is better)
Translates to: KGKQRCSAEADTSQRISFPSNMA*ACMRVL
Trigger: GAGAACTCGCATGCAGGCTCAAGCCATGTTAGAAGG...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR GCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATAAAAGTCTGTGCAGTTaGTCCAGCCATGGAACCAGA +
Preference number: 2 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNKSLCS*SSHGTR
Trigger: TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTT...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR GCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAAAAAGTCTGTGCAGTTaGTCCAGCCATGGAACCAGA +
Preference number: 2 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLKSLCS*SSHGTR
Trigger: TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTT...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR GCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTAGTACTGCCCAGTTTTaGCTACAGCCAGCCTGGTTT +
Preference number: 2 (lower is better)
Translates to: RTKENKDALQKLIQVKGFSTAQF*LQPAWF
Trigger: AAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACT...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR GCA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCAAAAGTCTGTGCAGTTaGTCCAGCCATGGAACCAGA +
Preference number: 2 (lower is better)
Translates to: PAAFQSNGRINGIFQINCKSLCS*SSHGTR
Trigger: TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTT...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR TCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCGTGAACCTGCATCATaGTTTTCAGACGGTCCAAAG +
Preference number: 2 (lower is better)
Translates to: KGKQRCSAEADTSQRISFREPAS*FSDGPK
Trigger: CTTTGGACCGTCTGAAAATCATGATGCAGGTTCACG...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264128.13
ENST00000639606.1
3UTR-3UTR TCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCATAAACCACATAACTaGTGCCTACAGCAGGGAGCA +
Preference number: 2 (lower is better)
Translates to: KGKQRCSAEADTSQRISFHKPHN*CLQQGA
Trigger: TGCTCCCTGCTGTAGGCATCAGTTATGTGGTTTATG...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR GCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTAAAAGTCTGTGCAGTTaGTCCAGCCATGGAACCAGA +
Preference number: 2 (lower is better)
Translates to: KGKQRCSAEADTSQRISFKSLCS*SSHGTR
Trigger: TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTT...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR CCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCATGCAACATCATTTCTaGGTTACTCCTAAAGTTTGC +
Preference number: 2 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFMQHHF*VTPKVC
Trigger: GCAAACTTTAGGAGTAACCCAGAAATGATGTTGCAT...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR CAA 90 bp AAAATCTTCTTGGCACAATCATATATTCCAGAGTACTGCCCAGTTTaGCCTACAGCCAGCCTGGTTTTCATAACCTCCATTGGATATATA +
Preference number: 2 (lower is better)
Translates to: KIFLAQSYIPEYCPV*PTASLVFITSIGYI
Trigger: TATATATCCAATGGAGGTTATGAAAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTCTGGAATATATGATTGTGCCAAGAAGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR GCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATATATATAAAAGTCTGTaGAGTTGCTCCAGCCATGGA +
Preference number: 2 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNIYKSL*SCSSHG
Trigger: TCCATGGCTGGAGCAACTGCACAGACTTTTATATAT...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR GCA 90 bp TGTTTGGAAAGACTACATGGAGCCAGCTGTAAAAAGCATGATTCAAACTGGTGCAAAGGAAAACAAAGATaGTCTGCAGAAGCTGATACA +
Preference number: 2 (lower is better)
Translates to: CLERLHGASCKKHDSNWCKGKQR*SAEADT
Trigger: TGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT...GCACCAGTTTGAATCATGCTTTTTACAGCTGGCTCCATGTAGTCTTTCCAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
3UTR-3UTR CCA 90 bp ACAAAGCAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGAAGAAAACAAAGAACCTaGGATGGATTCAGGACAAAA +
Preference number: 2 (lower is better)
Translates to: TKQLRKRSNVCAFIQNLGRKQRT*DGFRTK
Trigger: TTTTGTCCTGAATCCATCCCAGGTTCTTTGTTTTCT...TCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTGCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR-3UTR TCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCACTCCAGAGATTGTTaGAAGTTTCAATTATCAGGC +
Preference number: 2 (lower is better)
Translates to: RTKENKDALQKLIQVKGFHSRDC*KFQLSG
Trigger: GCCTGATAATTGAAACTTTCAACAATCTCTGGAGTG...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR GCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTATATATAAAAGTCTGTaGAGTTGCTCCAGCCATGGA +
Preference number: 2 (lower is better)
Translates to: KGKQRCSAEADTSQRISFIYKSL*SCSSHG
Trigger: TCCATGGCTGGAGCAACTGCACAGACTTTTATATAT...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR TCA 72 bp CCGGGGTCGCCGGTCGCGGCCCCACGCCCGAGTTTCTaGAGCCACCGGAGCGCTGGGCGCCACAGTTCCTCC +
Preference number: 3 (lower is better)
Translates to: PGSPVAAPRPSF*SHRSAGRHSSS
Trigger: GGAGGAACTGTGGCGCCCAGCGCTCCGGTGGCTTCAGAAACTCGGGCGTGGGGCCGCGACCGGCGACCCCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR CCA 72 bp CGGAGCGCTGGGCGCCACAGTTCCTCCTTCCTCTCCTaGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTC +
Preference number: 3 (lower is better)
Translates to: RSAGRHSSSFLS*QRLKPPPSSVL
Trigger: GAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGAGGAAGGAGGAACTGTGGCGCCCAGCGCTCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR CCA 72 bp GGCCCCACGCCCGAGTTTCTGAAGCCACCGGAGCGCTaGGCGCCACAGTTCCTCCTTCCTCTCCTGGCAACG +
Preference number: 3 (lower is better)
Translates to: GPTPEFLKPPER*APQFLLPLLAT
Trigger: CGTTGCCAGGAGAGGAAGGAGGAACTGTGGCGCCCAGCGCTCCGGTGGCTTCAGAAACTCGGGCGTGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR CCA 72 bp ATGAGCCTGGCCAATCCTGAGGCTCTGGGTCCCCCTTaGTACTGTGAACCCCAGGGCTGTAACTCTAATGGG +
Preference number: 3 (lower is better)
Translates to: MSLANPEALGPP*YCEPQGCNSNG
Trigger: CCCATTAGAGTTACAGCCCTGGGGTTCACAGTACCAAGGGGGACCCAGAGCCTCAGGATTGGCCAGGCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
3UTR TCA 72 bp GCAAGGTCGTCCCTTTCCTGGGCTGCTTCCAGCCAATaGTTGGACATGGTGGGGAACTCCAACTGGGCCATT +
Preference number: 3 (lower is better)
Translates to: ARSSLSWAASSQ*LDMVGNSNWAI
Trigger: AATGGCCCAGTTGGAGTTCCCCACCATGTCCAATCATTGGCTGGAAGCAGCCCAGGAAAGGGACGACCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR CCA 72 bp GGTCGTCCCTTTCCTGGGCTGCTTCCAGCCAATGATTaGACATGGTGGGGAACTCCAACTGGGCCATTTCTG +
Preference number: 3 (lower is better)
Translates to: GRPFPGLLPAND*TWWGTPTGPFL
Trigger: CAGAAATGGCCCAGTTGGAGTTCCCCACCATGTCCAATCATTGGCTGGAAGCAGCCCAGGAAAGGGACGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR CCA 72 bp CCCTTTCCTGGGCTGCTTCCAGCCAATGATTGGACATaGTGGGGAACTCCAACTGGGCCATTTCTGGGACAA +
Preference number: 3 (lower is better)
Translates to: PFPGLLPANDWT*WGTPTGPFLGQ
Trigger: TTGTCCCAGAAATGGCCCAGTTGGAGTTCCCCACCATGTCCAATCATTGGCTGGAAGCAGCCCAGGAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR CCA 72 bp TTTCCTGGGCTGCTTCCAGCCAATGATTGGACATGGTaGGGAACTCCAACTGGGCCATTTCTGGGACAATCA +
Preference number: 3 (lower is better)
Translates to: FPGLLPANDWTW*GTPTGPFLGQS
Trigger: TGATTGTCCCAGAAATGGCCCAGTTGGAGTTCCCCACCATGTCCAATCATTGGCTGGAAGCAGCCCAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR CCA 72 bp AGAGAATGCCAGTGTCAGGGAACGCTTCAACAGGGTTaGAGAAGTTCCACATATCTCCACCCTACTAAAGGG +
Preference number: 3 (lower is better)
Translates to: RECQCQGTLQQG*RSSTYLHPTKG
Trigger: CCCTTTAGTAGGGTGGAGATATGTGGAACTTCTCCAACCCTGTTGAAGCGTTCCCTGACACTGGCATTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR-3UTR CAA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAGAGTACTGCCCAGTTTaGCCTACAGCCAGCCTGGTT +
Preference number: 3 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLEYCPV*PTASLV
Trigger: AACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR CAA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCAAAGGGGCAGTGCTaGTTCGAGAGACAGCACCAG +
Preference number: 3 (lower is better)
Translates to: KGKQRCSAEADTSQRISFPKGQC*FERQHQ
Trigger: CTGGTGCTGTCTCTCGAACAAGCACTGCCCCTTTGG...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264128.13
ENST00000639606.1
3UTR TCA 72 bp CTTTTGTATATTGTAGGGACCATGGAGTTGTACCACTaGGATCTCCCTTCAAAGGCACCTACTGTGAGGAAC +
Preference number: 3 (lower is better)
Translates to: LLYIVGTMELYH*DLPSKAPTVRN
Trigger: GTTCCTCACAGTAGGTGCCTTTGAAGGGAGATCTCAGTGGTACAACTCCATGGTCCCTACAATATACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR GCA 72 bp GCTGTAACAAAGCAGCTTCGAAAGAGATCGAATGTGTaGGCCTTTATACAAAACTTGGGACCCACTGAAGTC +
Preference number: 3 (lower is better)
Translates to: AVTKQLRKRSNV*AFIQNLGPTEV
Trigger: GACTTCAGTGGGTCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTGCTTTGTTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR GCA 72 bp AGTAACCTAATCACTTTCCCTCTTTGGATAAGAGAATaGCAGTGTCAGGGAACGCTTCAACAGGGTTGGAGA +
Preference number: 3 (lower is better)
Translates to: SNLITFPLWIRE*QCQGTLQQGWR
Trigger: TCTCCAACCCTGTTGAAGCGTTCCCTGACACTGGCATTCTCTTATCCAAAGAGGGAAAGTGATTAGGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR TCA 72 bp GAATGTGTGCGCCTTTATACAAAACTTGGGACCCACTaGAGTCTGACAGCTAAAACGGATTACATGTCTGCA +
Preference number: 3 (lower is better)
Translates to: ECVRLYTKLGTH*SLTAKTDYMSA
Trigger: TGCAGACATGTAATCCGTTTTAGCTGTCAGACTTCAGTGGGTCCCAAGTTTTGTATAAAGGCGCACACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR TCA 72 bp TGCGCCTTTATACAAAACTTGGGACCCACTGAAGTCTaGCAGCTAAAACGGATTACATGTCTGCAAGGTATT +
Preference number: 3 (lower is better)
Translates to: CAFIQNLGPTEV*QLKRITCLQGI
Trigger: AATACCTTGCAGACATGTAATCCGTTTTAGCTGTCAGACTTCAGTGGGTCCCAAGTTTTGTATAAAGGCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR-3UTR CAA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCGTCTCAGGAGCAATTTaGATGACGTTTGTACCATTT +
Preference number: 3 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFVSGAI*MTFVPF
Trigger: AAATGGTACAAACGTCATCAAAATTGCTCCTGAGAC...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR CAA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCTCTTTTGCCATAGACTaGTTTCAATTCGAGGAGAAA +
Preference number: 3 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFSFAID*FQFEEK
Trigger: TTTCTCCTCGAATTGAAACAAGTCTATGGCAAAAGA...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR CAA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTATCATTTTGTCTGATTTaGAACCGTGAACCTGCATCA +
Preference number: 3 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLSFCLI*NREPAS
Trigger: TGATGCAGGTTCACGGTTCAAAATCAGACAAAATGA...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264128.13
ENST00000639606.1
3UTR-3UTR CAA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTGTCTCAGGAGCAATTTaGATGACGTTTGTACCATTT +
Preference number: 3 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLVSGAI*MTFVPF
Trigger: AAATGGTACAAACGTCATCAAAATTGCTCCTGAGAC...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR CAA 90 bp GTTTTCATAACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGTCAGTAAGTAACTTCTaGTACTGTTCATATGCCCAG +
Preference number: 3 (lower is better)
Translates to: VFITSIGYIKVCAVAPAMSVSNF*YCSYAQ
Trigger: CTGGGCATATGAACAGTACAAGAAGTTACTTACTGA...CATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTTATGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR CAA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAGTAAGTAACTTCTaGTACTGTTCATATGCCCAG +
Preference number: 3 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLSVSNF*YCSYAQ
Trigger: CTGGGCATATGAACAGTACAAGAAGTTACTTACTGA...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR GCA 72 bp GTCAAAATGCATCATACAGACAATATCTACAAGGGCTaGTCAGGAAAGGCCAAAATGTTTGGAAAGACTACA +
Preference number: 3 (lower is better)
Translates to: VKMHHTDNIYKG*SGKAKMFGKTT
Trigger: TGTAGTCTTTCCAAACATTTTGGCCTTTCCTGAGCAGCCCTTGTAGATATTGTCTGTATGATGCATTTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
3UTR-3UTR CAA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCGTCTCAGGAGCAATTTaGATGACGTTTGTACCATTT +
Preference number: 3 (lower is better)
Translates to: PAAFQSNGRINGIFQINCVSGAI*MTFVPF
Trigger: AAATGGTACAAACGTCATCAAAATTGCTCCTGAGAC...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR CCA 72 bp AAAAAGCTCCCAAGCCTTCATGTTTCAAAATCTTCTTaGCACAATCATATATTCCAGAGTACTGCCCAGTTT +
Preference number: 3 (lower is better)
Translates to: KKLPSLHVSKSS*HNHIFQSTAQF
Trigger: AAACTGGGCAGTACTCTGGAATATATGATTGTGCCAAGAAGATTTTGAAACATGAAGGCTTGGGAGCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR CAA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTTCTTTTGCCATAGACTaGTTTCAATTCGAGGAGAAA +
Preference number: 3 (lower is better)
Translates to: RTKENKDALQKLIQVKGFSFAID*FQFEEK
Trigger: TTTCTCCTCGAATTGAAACAAGTCTATGGCAAAAGA...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
3UTR TCA 72 bp CTCCAAAGCGAGCGGATACCTCCTTCTTTTACCATCTaGTATTGCTTGATTCTTAAACCATTCTTATTAGAT +
Preference number: 3 (lower is better)
Translates to: LQSERIPPSFTI*YCLILKPFLLD
Trigger: ATCTAATAAGAATGGTTTAAGAATCAAGCAATATCAGATGGTAAAAGAAGGAGGTATCCGCTCGCTTTGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648874.1
ENST00000649955.1
3UTR-3UTR CAA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTTCACTCCAGAGATTGTaGAAAGTTTCAATTATCAGG +
Preference number: 3 (lower is better)
Translates to: KGKQRCSAEADTSQRISFSLQRL*KVSIIR
Trigger: CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGA...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp CGGTCGCGGCCCCACGCCCGAGTTTCTGAAGCCACCGGAGCGCTGGGCGCCACAGAGGCGCAGGCGGCCTaGCCGAGGAAGTCACGGGAG +
Preference number: 4 (lower is better)
Translates to: RSRPHARVSEATGALGATEAQAA*PRKSRE
Trigger: CTCCCGTGACTTCCTCGGCCAGGCCGCCTGCGCCTC...TGTGGCGCCCAGCGCTCCGGTGGCTTCAGAAACTCGGGCGTGGGGCCGCGACCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp CTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCGCAGTGTCCCCAGCGAGGCGCAGGCGGCCTaGCCGAGGAAGTCACGGGAG +
Preference number: 4 (lower is better)
Translates to: LLATPQAAALLGPRSVPSEAQAA*PRKSRE
Trigger: CTCCCGTGACTTCCTCGGCCAGGCCGCCTGCGCCTC...GCTGGGGACACTGCGAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp CTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCGCAGTGTCCCCAGCCAGCAGGTCCAGGGCTaGAGCGTCAGCGCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: LLATPQAAALLGPRSVPSQQVQG*SVSASV
Trigger: CACCGACGCGCTGACGCTGCAGCCCTGGACCTGCTG...GCTGGGGACACTGCGAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp CTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCGCAGTGTCCCCAGCCCCGGGGTCGACCTCTaGCCAGTTGCCAGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: LLATPQAAALLGPRSVPSPGVDL*PVASPA
Trigger: AGCGGGACTGGCAACTGGGCAGAGGTCGACCCCGGG...GCTGGGGACACTGCGAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp TCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCGCAGTGTCCCCAGCGGCGCAACAGCGTTTaGGGCGCCGTCGGGGTTGCG +
Preference number: 4 (lower is better)
Translates to: SPGNASSRRPPRSSQCPQRRNSV*GAVGVA
Trigger: CGCAACCCCGACGGCGCCCCAAACGCTGTTGCGCCG...CTGGGGACACTGCGAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp TCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCGCAGTGTCCCCAGCCCGGGGTCGACCTCTaGCCAGTTGCCAGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: SPGNASSRRPPRSSQCPQPGVDL*PVASPA
Trigger: AGCGGGACTGGCAACTGGGCAGAGGTCGACCCCGGG...CTGGGGACACTGCGAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp TCGTATTATGACCCACTTCTGTTACCGGGGTCGCCGGTCGCGGCCCCACGCCCGCTCGGGCCGGAGCCTTaGCGGTCAGCCCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SYYDPLLLPGSPVAAPRPLGPEP*RSAQSC
Trigger: GCAGCTCTGGGCTGACCGCCAAGGCTCCGGCCCGAG...CGGGCGTGGGGCCGCGACCGGCGACCCCGGTAACAGAAGTGGGTCATAATACGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp TCGTATTATGACCCACTTCTGTTACCGGGGTCGCCGGTCGCGGCCCCACGCCCGGCGTCAGCGCGTCGGTaGCTTGGGAGCGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: SYYDPLLLPGSPVAAPRPASARR*LGSGVL
Trigger: CAAGACCCCGCTCCCAAGCCACCGACGCGCTGACGC...CGGGCGTGGGGCCGCGACCGGCGACCCCGGTAACAGAAGTGGGTCATAATACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp TCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCGCAGTGTCCCCAGAAGCCACCGGAGCGCTaGGCGCCACAGTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SPGNASSRRPPRSSQCPQKPPER*APQFLL
Trigger: AAGGAGGAACTGTGGCGCCCAGCGCTCCGGTGGCTT...CTGGGGACACTGCGAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp CGGTCGCGGCCCCACGCCCGAGTTTCTGAAGCCACCGGAGCGCTGGGCGCCACATTGGGAGCGGGGTCTTaGAGACTGGTTACTCCACTT +
Preference number: 4 (lower is better)
Translates to: RSRPHARVSEATGALGATLGAGS*RLVTPL
Trigger: AAGTGGAGTAACCAGTCTTCAAGACCCCGCTCCCAA...TGTGGCGCCCAGCGCTCCGGTGGCTTCAGAAACTCGGGCGTGGGGCCGCGACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp TCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCGCAGTGTCCCCAGCCCATTGCGGTCCAGTaGCTGGAAGAGGGTCTCGTA +
Preference number: 4 (lower is better)
Translates to: SPGNASSRRPPRSSQCPQPIAVQ*LEEGLV
Trigger: TACGAGACCCTCTTCCAGGCACTGGACCGCAATGGG...CTGGGGACACTGCGAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp AGTTCCTCCTTCCTCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCTTCCTGAGCCCCTCCTaGAGCTCGCCGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: SSSFLSWQRLKPPPSSVLFLSPS*SSPMST
Trigger: GGTGGACATCGGCGAGCTGCAGGAGGGGCTCAGGAA...GAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGAGGAAGGAGGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp TCGTATTATGACCCACTTCTGTTACCGGGGTCGCCGGTCGCGGCCCCACGCCCGAGCGCGTCGGTGGCTTaGGAGCGGGGTCTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: SYYDPLLLPGSPVAAPRPSASVA*ERGLED
Trigger: GTCTTCAAGACCCCGCTCCCAAGCCACCGACGCGCT...CGGGCGTGGGGCCGCGACCGGCGACCCCGGTAACAGAAGTGGGTCATAATACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp AGTTCCTCCTTCCTCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCTCCTCCTTCCTCTCCTaGCAACGCCTCAAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: SSSFLSWQRLKPPPSSVLSSFLS*QRLKPP
Trigger: CGGCGGCTTGAGGCGTTGCCAGGAGAGGAAGGAGGA...GAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGAGGAAGGAGGAACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp CGGTCGCGGCCCCACGCCCGAGTTTCTGAAGCCACCGGAGCGCTGGGCGCCACACAAAGGCACCTACTGTaGGGAACACAGTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: RSRPHARVSEATGALGATQRHLL*GTQLTS
Trigger: GGAAGTCAACTGTGTTCCTCACAGTAGGTGCCTTTG...TGTGGCGCCCAGCGCTCCGGTGGCTTCAGAAACTCGGGCGTGGGGCCGCGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp TCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCGCAGTGTCCCCAGCTGGAAACTGGGCCATaGAGGGCATTGTCTCTCACG +
Preference number: 4 (lower is better)
Translates to: SPGNASSRRPPRSSQCPQLETGP*RALSLT
Trigger: CGTGAGAGACAATGCCCTCCATGGCCCAGTTTCCAG...CTGGGGACACTGCGAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp TCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCGCAGTGTCCCCAGTCTCTGCCTGGAAACTaGGCCATGGAGGGCATTGTC +
Preference number: 4 (lower is better)
Translates to: SPGNASSRRPPRSSQCPQSLPGN*AMEGIV
Trigger: GACAATGCCCTCCATGGCCCAGTTTCCAGGCAGAGA...CTGGGGACACTGCGAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp AGTTCCTCCTTCCTCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCAACCCTGGCATCTGCTaGTGCACTGCAGCAAGGTCG +
Preference number: 4 (lower is better)
Translates to: SSSFLSWQRLKPPPSSVLNPGIC*CTAARS
Trigger: CGACCTTGCTGCAGTGCATCAGCAGATGCCAGGGTT...GAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGAGGAAGGAGGAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp AGTTCCTCCTTCCTCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCCCCATTGCGGTCCAGTaGCTGGAAGAGGGTCTCGTA +
Preference number: 4 (lower is better)
Translates to: SSSFLSWQRLKPPPSSVLPIAVQ*LEEGLV
Trigger: TACGAGACCCTCTTCCAGGCACTGGACCGCAATGGG...GAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGAGGAAGGAGGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp AGTAGACTTTCGTATTATGACCCACTTCTGTTACCGGGGTCGCCGGTCGCGGCCCCTGGCAGGCCGCGGTaGGCAGCACGAAGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: SRLSYYDPLLLPGSPVAAPGRPR*AARSPA
Trigger: TGCGGGACTTCGTGCTGCCCACCGCGGCCTGCCAGG...GGCCGCGACCGGCGACCCCGGTAACAGAAGTGGGTCATAATACGAAAGTCTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp AGTAGACTTTCGTATTATGACCCACTTCTGTTACCGGGGTCGCCGGTCGCGGCCCTCGGGCCGGAGCCTTaGCGGTCAGCCCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SRLSYYDPLLLPGSPVAALGPEP*RSAQSC
Trigger: GCAGCTCTGGGCTGACCGCCAAGGCTCCGGCCCGAG...GGCCGCGACCGGCGACCCCGGTAACAGAAGTGGGTCATAATACGAAAGTCTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp AGTAGACTTTCGTATTATGACCCACTTCTGTTACCGGGGTCGCCGGTCGCGGCCGCGTCAGCGCGTCGGTaGCTTGGGAGCGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: SRLSYYDPLLLPGSPVAAASARR*LGSGVL
Trigger: CAAGACCCCGCTCCCAAGCCACCGACGCGCTGACGC...GGCCGCGACCGGCGACCCCGGTAACAGAAGTGGGTCATAATACGAAAGTCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp TCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCGCAGTGTCCCCAGCTTCTCAACAGGAAGTaGGGGAAACACGCGATTGGT +
Preference number: 4 (lower is better)
Translates to: SPGNASSRRPPRSSQCPQLLNRK*GKHAIG
Trigger: ACCAATCGCGTGTTTCCCCCACTTCCTGTTGAGAAG...CTGGGGACACTGCGAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp CGGTCGCGGCCCCACGCCCGAGTTTCTGAAGCCACCGGAGCGCTGGGCGCCACACAACTGGGCCATTTCTaGGACAATCAGCACAAAGTA +
Preference number: 4 (lower is better)
Translates to: RSRPHARVSEATGALGATQLGHF*DNQHKV
Trigger: TACTTTGTGCTGATTGTCCCAGAAATGGCCCAGTTG...TGTGGCGCCCAGCGCTCCGGTGGCTTCAGAAACTCGGGCGTGGGGCCGCGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp AGTTCCTCCTTCCTCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCTTGGGAGCGGGGTCTTaGAGACTGGTTACTCCACTT +
Preference number: 4 (lower is better)
Translates to: SSSFLSWQRLKPPPSSVLLGAGS*RLVTPL
Trigger: AAGTGGAGTAACCAGTCTTCAAGACCCCGCTCCCAA...GAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGAGGAAGGAGGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp CGGTCGCGGCCCCACGCCCGAGTTTCTGAAGCCACCGGAGCGCTGGGCGCCACAGATAGATATGAGGAATaGAATAGAGAACCTACCTAC +
Preference number: 4 (lower is better)
Translates to: RSRPHARVSEATGALGATDRYEE*NREPTY
Trigger: GTAGGTAGGTTCTCTATTTCATTCCTCATATCTATC...TGTGGCGCCCAGCGCTCCGGTGGCTTCAGAAACTCGGGCGTGGGGCCGCGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp CTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCGCAGTGTCCCCAGCAATTCTCAAGCTTTTTaGTCTCAGGATCCCTTTACA +
Preference number: 4 (lower is better)
Translates to: LLATPQAAALLGPRSVPSNSQAF*SQDPFT
Trigger: TGTAAAGGGATCCTGAGATCAAAAAGCTTGAGAATT...GCTGGGGACACTGCGAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp CTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCGCAGTGTCCCCAGCAAGAGATCGAATGTGTaGGCCTTTATACAAAACTTG +
Preference number: 4 (lower is better)
Translates to: LLATPQAAALLGPRSVPSKRSNV*AFIQNL
Trigger: CAAGTTTTGTATAAAGGCGCACACATTCGATCTCTT...GCTGGGGACACTGCGAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp TCGTATTATGACCCACTTCTGTTACCGGGGTCGCCGGTCGCGGCCCCACGCCCGCTTTGGATAAGAGAATaGCAGTGTCAGGGAACGCTT +
Preference number: 4 (lower is better)
Translates to: SYYDPLLLPGSPVAAPRPLWIRE*QCQGTL
Trigger: AAGCGTTCCCTGACACTGGCATTCTCTTATCCAAAG...CGGGCGTGGGGCCGCGACCGGCGACCCCGGTAACAGAAGTGGGTCATAATACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp TCGTATTATGACCCACTTCTGTTACCGGGGTCGCCGGTCGCGGCCCCACGCCCGGTTGCACACCTGGGATaGCGATTCTGCTTTAAAAAG +
Preference number: 4 (lower is better)
Translates to: SYYDPLLLPGSPVAAPRPVAHLG*RFCFKK
Trigger: CTTTTTAAAGCAGAATCGCCATCCCAGGTGTGCAAC...CGGGCGTGGGGCCGCGACCGGCGACCCCGGTAACAGAAGTGGGTCATAATACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp CAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGACCCACTCTGGGTCTCGGGAGGTaGTGTGCGGACCCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: QLRKRSNVCAFIQNLGPTLGLGR*CADPGS
Trigger: CGACCCCGGGTCCGCACAGCACCTCCCGAGACCCAG...AGTGGGTCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp GAGTACTGCCCAGTTTTGCCTACAGCCAGCCTGGTTTTCATAACCTCCATTGGATTCCTGAGCCCCTCCTaGAGCTCGCCGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: EYCPVLPTASLVFITSIGFLSPS*SSPMST
Trigger: GGTGGACATCGGCGAGCTGCAGGAGGGGCTCAGGAA...TCCAATGGAGGTTATGAAAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGACCCACTGAAGTCTCGGCGCAACAGCGTTTaGGGCGCCGTCGGGGTTGCG +
Preference number: 4 (lower is better)
Translates to: ERDRMCAPLYKTWDPLKSRRNSV*GAVGVA
Trigger: CGCAACCCCGACGGCGCCCCAAACGCTGTTGCGCCG...AGACTTCAGTGGGTCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp AACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGACGGCGCAACAGCGTTTaGGGCGCCGTCGGGGTTGCG +
Preference number: 4 (lower is better)
Translates to: NLHWIYKSLCSCSSHGTRRRNSV*GAVGVA
Trigger: CGCAACCCCGACGGCGCCCCAAACGCTGTTGCGCCG...TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCGAGGCGCAGGCGGCCTaGCCGAGGAAGTCACGGGAG +
Preference number: 4 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFEAQAA*PRKSRE
Trigger: CTCCCGTGACTTCCTCGGCCAGGCCGCCTGCGCCTC...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GAATGTCTTAAACAATGGAATGCCGCCATTCCTTCTCAACAGGAAGTGGGGGAAGCAGCCAGCGCAACATaGTCCCAGAGGCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: ECLKQWNAAIPSQQEVGEAASAT*SQRRRR
Trigger: CCGCCTGCGCCTCTGGGACCATGTTGCGCTGGCTGC...TTCCCCCACTTCCTGTTGAGAAGGAATGGCGGCATTCCATTGTTTAAGACATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp CAAAAGTGTCTTAAAAATTTAACAGTGCCCGTGGGCCAGAGTGTCCACAACACTCCTGGCAGGCCGCGGTaGGCAGCACGAAGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: QKCLKNLTVPVGQSVHNTPGRPR*AARSPA
Trigger: TGCGGGACTTCGTGCTGCCCACCGCGGCCTGCCAGG...AGTGTTGTGGACACTCTGGCCCACGGGCACTGTTAAATTTTTAAGACACTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp CAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGACCCACTACCTCCTCGGCGTCCTaGCCCAGAGGGATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QLRKRSNVCAFIQNLGPTTSSAS*PRGMPR
Trigger: CCTGGGCATCCCTCTGGGCCAGGACGCCGAGGAGGT...AGTGGGTCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp TCGTATTATGACCCACTTCTGTTACCGGGGTCGCCGGTCGCGGCCCCACGCCCGGAATGTCTTAAACAATaGAATGCCGCCATTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SYYDPLLLPGSPVAAPRPECLKQ*NAAIPS
Trigger: AGAAGGAATGGCGGCATTCCATTGTTTAAGACATTC...CGGGCGTGGGGCCGCGACCGGCGACCCCGGTAACAGAAGTGGGTCATAATACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp GAATGTCTTAAACAATGGAATGCCGCCATTCCTTCTCAACAGGAAGTGGGGGAACCAGAGAGCCGGAAGTaGGGGAGCTGGGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: ECLKQWNAAIPSQQEVGEPESRK*GSWELG
Trigger: ACCCAGCTCCCAGCTCCCTCACTTCCGGCTCTCTGG...TTCCCCCACTTCCTGTTGAGAAGGAATGGCGGCATTCCATTGTTTAAGACATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp CAAAAGTGTCTTAAAAATTTAACAGTGCCCGTGGGCCAGAGTGTCCACAACACTCCACGCCCGAGTTTCTaGAGCCACCGGAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: QKCLKNLTVPVGQSVHNTPRPSF*SHRSAG
Trigger: CCCAGCGCTCCGGTGGCTTCAGAAACTCGGGCGTGG...AGTGTTGTGGACACTCTGGCCCACGGGCACTGTTAAATTTTTAAGACACTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp AGTTCCTCCTTCCTCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCGATAGATATGAGGAATaGAATAGAGAACCTACCTAC +
Preference number: 4 (lower is better)
Translates to: SSSFLSWQRLKPPPSSVLDRYEE*NREPTY
Trigger: GTAGGTAGGTTCTCTATTTCATTCCTCATATCTATC...GAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGAGGAAGGAGGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp CAAAAGTGTCTTAAAAATTTAACAGTGCCCGTGGGCCAGAGTGTCCACAACACTCAGCAGGTCCAGGGCTaGAGCGTCAGCGCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: QKCLKNLTVPVGQSVHNTQQVQG*SVSASV
Trigger: CACCGACGCGCTGACGCTGCAGCCCTGGACCTGCTG...AGTGTTGTGGACACTCTGGCCCACGGGCACTGTTAAATTTTTAAGACACTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTCGGCGCAACAGCGTTTaGGGCGCCGTCGGGGTTGCG +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIRRNSV*GAVGVA
Trigger: CGCAACCCCGACGGCGCCCCAAACGCTGTTGCGCCG...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTGAGGCGCAGGCGGCCTaGCCGAGGAAGTCACGGGAG +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIEAQAA*PRKSRE
Trigger: CTCCCGTGACTTCCTCGGCCAGGCCGCCTGCGCCTC...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGGAGGCGCAGGCGGCCTaGCCGAGGAAGTCACGGGAG +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGREAQAA*PRKSRE
Trigger: CTCCCGTGACTTCCTCGGCCAGGCCGCCTGCGCCTC...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCGCAGCCAGCGCAACATaGTCCCAGAGGCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFAASAT*SQRRRR
Trigger: CCGCCTGCGCCTCTGGGACCATGTTGCGCTGGCTGC...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GAATGTCTTAAACAATGGAATGCCGCCATTCCTTCTCAACAGGAAGTGGGGGAAGAGGGAGCTGGGAGCTaGGTCTCGGGAGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: ECLKQWNAAIPSQQEVGEEGAGS*VSGGAV
Trigger: CACAGCACCTCCCGAGACCCAGCTCCCAGCTCCCTC...TTCCCCCACTTCCTGTTGAGAAGGAATGGCGGCATTCCATTGTTTAAGACATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp CAAAAGTGTCTTAAAAATTTAACAGTGCCCGTGGGCCAGAGTGTCCACAACACTACCTCCTCGGCGTCCTaGCCCAGAGGGATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QKCLKNLTVPVGQSVHNTTSSAS*PRGMPR
Trigger: CCTGGGCATCCCTCTGGGCCAGGACGCCGAGGAGGT...AGTGTTGTGGACACTCTGGCCCACGGGCACTGTTAAATTTTTAAGACACTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp AGTTCCTCCTTCCTCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCAGAAAACAAAGAACCTaGGATGGATTCAGGACAAAA +
Preference number: 4 (lower is better)
Translates to: SSSFLSWQRLKPPPSSVLRKQRT*DGFRTK
Trigger: TTTTGTCCTGAATCCATCCCAGGTTCTTTGTTTTCT...GAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGAGGAAGGAGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGCGCAGCTCCGCGGCCTaGGTGAGCCCCAGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRRSSAA*VSPSGV
Trigger: CACCCCGCTGGGGCTCACTCAGGCCGCGGAGCTGCG...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS-3UTR TCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCGCAGCTCCGCGGCCTaGGTGAGCCCCAGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: KGKQRCSAEADTSQRISFRSSAA*VSPSGV
Trigger: CACCCCGCTGGGGCTCACTCAGGCCGCGGAGCTGCG...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS-3UTR GCA 90 bp CAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGACCCACTTTCCTGAGCCCCTCCTaGAGCTCGCCGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: QLRKRSNVCAFIQNLGPTFLSPS*SSPMST
Trigger: GGTGGACATCGGCGAGCTGCAGGAGGGGCTCAGGAA...AGTGGGTCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTACGGCGCAACAGCGTTTaGGGCGCCGTCGGGGTTGCG +
Preference number: 4 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLRRNSV*GAVGVA
Trigger: CGCAACCCCGACGGCGCCCCAAACGCTGTTGCGCCG...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGGCAGCCAGCGCAACATaGTCCCAGAGGCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRAASAT*SQRRRR
Trigger: CCGCCTGCGCCTCTGGGACCATGTTGCGCTGGCTGC...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp CTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGAAATGCAGCCAGCGCAACATaGTCCCAGAGGCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LHWIYKSLCSCSSHGTRNAASAT*SQRRRR
Trigger: CCGCCTGCGCCTCTGGGACCATGTTGCGCTGGCTGC...ATTTCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTCCTGGCAGGCCGCGGTaGGCAGCACGAAGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLPGRPR*AARSPA
Trigger: TGCGGGACTTCGTGCTGCCCACCGCGGCCTGCCAGG...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGACCCACTGAAGTCTGAGGGAGCTGGGAGCTaGGTCTCGGGAGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: ERDRMCAPLYKTWDPLKSEGAGS*VSGGAV
Trigger: CACAGCACCTCCCGAGACCCAGCTCCCAGCTCCCTC...AGACTTCAGTGGGTCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp TTAACAGTGCCCGTGGGCCAGAGTGTCCACAACACTCATTTTATCTGGACAAATAAGCCACCGGAGCGCTaGGCGCCACAGTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LTVPVGQSVHNTHFIWTNKPPER*APQFLL
Trigger: AAGGAGGAACTGTGGCGCCCAGCGCTCCGGTGGCTT...ATTTGTCCAGATAAAATGAGTGTTGTGGACACTCTGGCCCACGGGCACTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp AACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGATTCCTGAGCCCCTCCTaGAGCTCGCCGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: NLHWIYKSLCSCSSHGTRFLSPS*SSPMST
Trigger: GGTGGACATCGGCGAGCTGCAGGAGGGGCTCAGGAA...TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp CAAGGGCTGCTCAGGAAAGGCCAAAATGTTTGGAAAGACTACATGGAGCCAGCTAGACAGCACCAGCAATaGCTCCTGCCAAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QGLLRKGQNVWKDYMEPARQHQQ*LLPKAA
Trigger: GGCAGCTTTTGGCAGGAGGCATTGCTGGTGCTGTCT...AGCTGGCTCCATGTAGTCTTTCCAAACATTTTGGCCTTTCCTGAGCAGCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR GCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCCCAGCGGGGTGGAAGTaGGACCGACGAACGGGATCT +
Preference number: 4 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFPAGWK*DRRTGS
Trigger: AGATCCCGTTCGTCGGTCGCACTTCCACCCCGCTGG...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS-3UTR GCA 90 bp ACAAAGCAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGAGTCCCGCTGTCAGCATaGGGGTCCGAGGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: TKQLRKRSNVCAFIQNLGVPLSA*GSEEEA
Trigger: GGCCTCTTCCTCGGACCCGCATGCTGACAGCGGGAC...TCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTGCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp ATAACAGTTGTTGGCCCTCATAGTAACCTAATCACTTTCCCTCTTTGGATAAGACTGGGTCTCGGGAGGTaGTGTGCGGACCCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: ITVVGPHSNLITFPLWIRLGLGR*CADPGS
Trigger: CGACCCCGGGTCCGCACAGCACCTCCCGAGACCCAG...TCTTATCCAAAGAGGGAAAGTGATTAGGTTACTATGAGGGCCAACAACTGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTGAGGCGCAGGCGGCCTaGCCGAGGAAGTCACGGGAG +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFEAQAA*PRKSRE
Trigger: CTCCCGTGACTTCCTCGGCCAGGCCGCCTGCGCCTC...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTGCAGCCAGCGCAACATaGTCCCAGAGGCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLAASAT*SQRRRR
Trigger: CCGCCTGCGCCTCTGGGACCATGTTGCGCTGGCTGC...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCCCTGGCAGGCCGCGGTaGGCAGCACGAAGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: PAAFQSNGRINGIFQINCPGRPR*AARSPA
Trigger: TGCGGGACTTCGTGCTGCCCACCGCGGCCTGCCAGG...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp CAAGGGCTGCTCAGGAAAGGCCAAAATGTTTGGAAAGACTACATGGAGCCAGCTTCTCACCAAAGCCAATaGGTAGCTGGCCAGCTGACC +
Preference number: 4 (lower is better)
Translates to: QGLLRKGQNVWKDYMEPASHQSQ*VAGQLT
Trigger: GGTCAGCTGGCCAGCTACCCATTGGCTTTGGTGAGA...AGCTGGCTCCATGTAGTCTTTCCAAACATTTTGGCCTTTCCTGAGCAGCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CCA 90 bp CAAAAGTGTCTTAAAAATTTAACAGTGCCCGTGGGCCAGAGTGTCCACAACACTAGCGCGTCGGTGGCTTaGGAGCGGGGTCTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: QKCLKNLTVPVGQSVHNTSASVA*ERGLED
Trigger: GTCTTCAAGACCCCGCTCCCAAGCCACCGACGCGCT...AGTGTTGTGGACACTCTGGCCCACGGGCACTGTTAAATTTTTAAGACACTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp CAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGACCCACTAACCCTGGCATCTGCTaGTGCACTGCAGCAAGGTCG +
Preference number: 4 (lower is better)
Translates to: QLRKRSNVCAFIQNLGPTNPGIC*CTAARS
Trigger: CGACCTTGCTGCAGTGCATCAGCAGATGCCAGGGTT...AGTGGGTCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp GAGTACTGCCCAGTTTTGCCTACAGCCAGCCTGGTTTTCATAACCTCCATTGGATGGCTTGAGCCTGCATaGGAGTTCTCACCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: EYCPVLPTASLVFITSIGWLEPA*EFSPKP
Trigger: TGGCTTTGGTGAGAACTCGCATGCAGGCTCAAGCCA...TCCAATGGAGGTTATGAAAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp CAAAAGTGTCTTAAAAATTTAACAGTGCCCGTGGGCCAGAGTGTCCACAACACTCGACCTCTGCCCAGTTaGCAGTCCCGCTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: QKCLKNLTVPVGQSVHNTRPLPS*QSRCQH
Trigger: ATGCTGACAGCGGGACTGGCAACTGGGCAGAGGTCG...AGTGTTGTGGACACTCTGGCCCACGGGCACTGTTAAATTTTTAAGACACTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTGAGGCGCAGGCGGCCTaGCCGAGGAAGTCACGGGAG +
Preference number: 4 (lower is better)
Translates to: KGKQRCSAEADTSQRISFEAQAA*PRKSRE
Trigger: CTCCCGTGACTTCCTCGGCCAGGCCGCCTGCGCCTC...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp ATAACAGTTGTTGGCCCTCATAGTAACCTAATCACTTTCCCTCTTTGGATAAGAGCAGCCAGCGCAACATaGTCCCAGAGGCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: ITVVGPHSNLITFPLWIRAASAT*SQRRRR
Trigger: CCGCCTGCGCCTCTGGGACCATGTTGCGCTGGCTGC...TCTTATCCAAAGAGGGAAAGTGATTAGGTTACTATGAGGGCCAACAACTGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGCCTGGCAGGCCGCGGTaGGCAGCACGAAGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRPGRPR*AARSPA
Trigger: TGCGGGACTTCGTGCTGCCCACCGCGGCCTGCCAGG...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGACCTGGCAGGCCGCGGTaGGCAGCACGAAGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: KQILFKPVHFQISDSGQRPGRPR*AARSPA
Trigger: TGCGGGACTTCGTGCTGCCCACCGCGGCCTGCCAGG...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGGCTCTGGGTCCCCCTTaGTACTGTGAACCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRALGPP*YCEPQG
Trigger: GCCCTGGGGTTCACAGTACCAAGGGGGACCCAGAGC...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR GCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATTTCCTGAGCCCCTCCTaGAGCTCGCCGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNFLSPS*SSPMST
Trigger: GGTGGACATCGGCGAGCTGCAGGAGGGGCTCAGGAA...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGACCAGCTGACCACAGGTaGTGGATAAGGCACCGCATC +
Preference number: 4 (lower is better)
Translates to: NLHWIYKSLCSCSSHGTRPADHR*WIRHRI
Trigger: GATGCGGTGCCTTATCCAGCACCTGTGGTCAGCTGG...TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCCAGCGGGGTGGAAGTaGGACCGACGAACGGGATCT +
Preference number: 4 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNPAGWK*DRRTGS
Trigger: AGATCCCGTTCGTCGGTCGCACTTCCACCCCGCTGG...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS-3UTR GCA 90 bp CCTTTCCTGGGCTGCTTCCAGCCAATGATTGGACATGGTGGGGAACTCCAACTGCTGGGATGGCGATTCTaGTTTAAAAAGCAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: PFLGCFQPMIGHGGELQLLGWRF*FKKQRV
Trigger: AACTCTCTGCTTTTTAAAGCAGAATCGCCATCCCAG...CAGTTGGAGTTCCCCACCATGTCCAATCATTGGCTGGAAGCAGCCCAGGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGGCAGCCAGCGCAACATaGTCCCAGAGGCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRAASAT*SQRRRR
Trigger: CCGCCTGCGCCTCTGGGACCATGTTGCGCTGGCTGC...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTTTCTCCTCGGCGTCCTaGCCCAGAGGGATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFFSSAS*PRGMPR
Trigger: CCTGGGCATCCCTCTGGGCCAGGACGCCGAGGAGAA...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAATTCTCCTCGGCGTCCTaGCCCAGAGGGATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVEFSSAS*PRGMPR
Trigger: CCTGGGCATCCCTCTGGGCCAGGACGCCGAGGAGAA...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGAGCTGACCACAGGTGCTaGATAAGGCACCGCATCCCA +
Preference number: 4 (lower is better)
Translates to: NLHWIYKSLCSCSSHGTRADHRC*IRHRIP
Trigger: TGGGATGCGGTGCCTTATCCAGCACCTGTGGTCAGC...TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GAATGTCTTAAACAATGGAATGCCGCCATTCCTTCTCAACAGGAAGTGGGGGAATCTCTGCCTGGAAACTaGGCCATGGAGGGCATTGTC +
Preference number: 4 (lower is better)
Translates to: ECLKQWNAAIPSQQEVGESLPGN*AMEGIV
Trigger: GACAATGCCCTCCATGGCCCAGTTTCCAGGCAGAGA...TTCCCCCACTTCCTGTTGAGAAGGAATGGCGGCATTCCATTGTTTAAGACATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp TGTTTGGAAAGACTACATGGAGCCAGCTGTAAAAAGCATGATTCAAACTGGTGCCCCATTGCGGTCCAGTaGCTGGAAGAGGGTCTCGTA +
Preference number: 4 (lower is better)
Translates to: CLERLHGASCKKHDSNWCPIAVQ*LEEGLV
Trigger: TACGAGACCCTCTTCCAGGCACTGGACCGCAATGGG...GCACCAGTTTGAATCATGCTTTTTACAGCTGGCTCCATGTAGTCTTTCCAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR GCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCCCTCCTGCCAAAAGCTaGCTCCACCATTGTCCGGAT +
Preference number: 4 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFPPAKS*LHHCPD
Trigger: ATCCGGACAATGGTGGAGGCAGCTTTTGGCAGGAGG...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGACCTCCTGCCAAAAGCTaGCTCCACCATTGTCCGGAT +
Preference number: 4 (lower is better)
Translates to: NLHWIYKSLCSCSSHGTRPPAKS*LHHCPD
Trigger: ATCCGGACAATGGTGGAGGCAGCTTTTGGCAGGAGG...TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGAAGACAGCACCAGCAATaGCTCCTGCCAAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: NLHWIYKSLCSCSSHGTRRQHQQ*LLPKAA
Trigger: GGCAGCTTTTGGCAGGAGGCATTGCTGGTGCTGTCT...TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCGGTCCAAAGGGGCAGTaGTTGTTCGAGAGACAGCAC +
Preference number: 4 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFGPKGQ*LFERQH
Trigger: GTGCTGTCTCTCGAACAAGCACTGCCCCTTTGGACC...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGCCAGCTGACCACAGGTaGTGGATAAGGCACCGCATC +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRPADHR*WIRHRI
Trigger: GATGCGGTGCCTTATCCAGCACCTGTGGTCAGCTGG...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTCCAGCTGACCACAGGTaGTGGATAAGGCACCGCATC +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIPADHR*WIRHRI
Trigger: GATGCGGTGCCTTATCCAGCACCTGTGGTCAGCTGG...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TGTTTGGAAAGACTACATGGAGCCAGCTGTAAAAAGCATGATTCAAACTGGTGCCACAGAGCTGCCTTGTaGAGCTGTGGACAGGGACAG +
Preference number: 4 (lower is better)
Translates to: CLERLHGASCKKHDSNWCHRAAL*SCGQGQ
Trigger: CTGTCCCTGTCCACAGCTGCACAAGGCAGCTCTGTG...GCACCAGTTTGAATCATGCTTTTTACAGCTGGCTCCATGTAGTCTTTCCAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR GCA 90 bp AGTGTCCACAACACTCATTTTATCTGGACAAATACCAGTAGACTTTCGTATTATTCTCGGGAGGTGCTGTaGGGACCCGGGGTCGACCTC +
Preference number: 4 (lower is better)
Translates to: SVHNTHFIWTNTSRLSYYSREVL*GPGVDL
Trigger: GAGGTCGACCCCGGGTCCGCACAGCACCTCCCGAGA...ATAATACGAAAGTCTACTGGTATTTGTCCAGATAAAATGAGTGTTGTGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGCAGCCAGCGCAACATaGTCCCAGAGGCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQAASAT*SQRRRR
Trigger: CCGCCTGCGCCTCTGGGACCATGTTGCGCTGGCTGC...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGTTCTCCTCGGCGTCCTaGCCCAGAGGGATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRFSSAS*PRGMPR
Trigger: CCTGGGCATCCCTCTGGGCCAGGACGCCGAGGAGAA...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTCTCCTCGGCGTCCTaGCCCAGAGGGATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KQILFKPVHFQISDSGQRFSSAS*PRGMPR
Trigger: CCTGGGCATCCCTCTGGGCCAGGACGCCGAGGAGAA...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTTTCTCCTCGGCGTCCTaGCCCAGAGGGATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KGKQRCSAEADTSQRISFFSSAS*PRGMPR
Trigger: CCTGGGCATCCCTCTGGGCCAGGACGCCGAGGAGAA...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTGCTGACCACAGGTGCTaGATAAGGCACCGCATCCCA +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIADHRC*IRHRIP
Trigger: TGGGATGCGGTGCCTTATCCAGCACCTGTGGTCAGC...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGGCTGACCACAGGTGCTaGATAAGGCACCGCATCCCA +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRADHRC*IRHRIP
Trigger: TGGGATGCGGTGCCTTATCCAGCACCTGTGGTCAGC...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AAGGCACCTACTGTGAGGAACACAGTTGACTTCCACTCTCTAGCCTCTAACCCTCGGGGTCTTGAAGACTaGTTACTCCACTTAAAGACC +
Preference number: 4 (lower is better)
Translates to: KAPTVRNTVDFHSLASNPRGLED*LLHLKT
Trigger: GGTCTTTAAGTGGAGTAACCAGTCTTCAAGACCCCG...AGGGTTAGAGGCTAGAGAGTGGAAGTCAACTGTGTTCCTCACAGTAGGTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp ATAACAGTTGTTGGCCCTCATAGTAACCTAATCACTTTCCCTCTTTGGATAAGATCCTCCTTCCTCTCCTaGCAACGCCTCAAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: ITVVGPHSNLITFPLWIRSSFLS*QRLKPP
Trigger: CGGCGGCTTGAGGCGTTGCCAGGAGAGGAAGGAGGA...TCTTATCCAAAGAGGGAAAGTGATTAGGTTACTATGAGGGCCAACAACTGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCAGGTTTCATGCAGCATaGGAACCAGGAGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFRFHAA*EPGALE
Trigger: CTCCAGTGCTCCTGGTTCTCATGCTGCATGAAACCT...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTACCCATTGCGGTCCAGTaGCTGGAAGAGGGTCTCGTA +
Preference number: 4 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLPIAVQ*LEEGLV
Trigger: TACGAGACCCTCTTCCAGGCACTGGACCGCAATGGG...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCCCATTGCGGTCCAGTaGCTGGAAGAGGGTCTCGTA +
Preference number: 4 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNPIAVQ*LEEGLV
Trigger: TACGAGACCCTCTTCCAGGCACTGGACCGCAATGGG...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTTTCCTGAGCCCCTCCTaGAGCTCGCCGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: KGKQRCSAEADTSQRISFFLSPS*SSPMST
Trigger: GGTGGACATCGGCGAGCTGCAGGAGGGGCTCAGGAA...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGTTCCTGAGCCCCTCCTaGAGCTCGCCGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRFLSPS*SSPMST
Trigger: GGTGGACATCGGCGAGCTGCAGGAGGGGCTCAGGAA...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGCCTCCTGCCAAAAGCTaGCTCCACCATTGTCCGGAT +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRPPAKS*LHHCPD
Trigger: ATCCGGACAATGGTGGAGGCAGCTTTTGGCAGGAGG...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TGTTTGGAAAGACTACATGGAGCCAGCTGTAAAAAGCATGATTCAAACTGGTGCCCTCCTGCCAAAAGCTaGCTCCACCATTGTCCGGAT +
Preference number: 4 (lower is better)
Translates to: CLERLHGASCKKHDSNWCPPAKS*LHHCPD
Trigger: ATCCGGACAATGGTGGAGGCAGCTTTTGGCAGGAGG...GCACCAGTTTGAATCATGCTTTTTACAGCTGGCTCCATGTAGTCTTTCCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR GCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAGACAGCACCAGCAATaGCTCCTGCCAAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIRQHQQ*LLPKAA
Trigger: GGCAGCTTTTGGCAGGAGGCATTGCTGGTGCTGTCT...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTGGTCCAAAGGGGCAGTaGTTGTTCGAGAGACAGCAC +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIGPKGQ*LFERQH
Trigger: GTGCTGTCTCTCGAACAAGCACTGCCCCTTTGGACC...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAGACGAACGGGATCTCTaGCCACCACACACGTCCAGT +
Preference number: 4 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLDERDL*PPHTSS
Trigger: ACTGGACGTGTGTGGTGGGCAGAGATCCCGTTCGTC...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS-3UTR GCA 90 bp AGTGTCCACAACACTCATTTTATCTGGACAAATACCAGTAGACTTTCGTATTATGTCCCGCTGTCAGCATaGGGGTCCGAGGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SVHNTHFIWTNTSRLSYYVPLSA*GSEEEA
Trigger: GGCCTCTTCCTCGGACCCGCATGCTGACAGCGGGAC...ATAATACGAAAGTCTACTGGTATTTGTCCAGATAAAATGAGTGTTGTGGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp ATAACAGTTGTTGGCCCTCATAGTAACCTAATCACTTTCCCTCTTTGGATAAGACGACCTCTGCCCAGTTaGCAGTCCCGCTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: ITVVGPHSNLITFPLWIRRPLPS*QSRCQH
Trigger: ATGCTGACAGCGGGACTGGCAACTGGGCAGAGGTCG...TCTTATCCAAAGAGGGAAAGTGATTAGGTTACTATGAGGGCCAACAACTGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp GAGTACTGCCCAGTTTTGCCTACAGCCAGCCTGGTTTTCATAACCTCCATTGGATGGAGGCAAAGATACTaGATTCCCCCTCTCATTTGT +
Preference number: 4 (lower is better)
Translates to: EYCPVLPTASLVFITSIGWRQRY*IPPLIC
Trigger: ACAAATGAGAGGGGGAATGCAGTATCTTTGCCTCCA...TCCAATGGAGGTTATGAAAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATGCTGACCACAGGTGCTaGATAAGGCACCGCATCCCA +
Preference number: 4 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNADHRC*IRHRIP
Trigger: TGGGATGCGGTGCCTTATCCAGCACCTGTGGTCAGC...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTGCTGACCACAGGTGCTaGATAAGGCACCGCATCCCA +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLADHRC*IRHRIP
Trigger: TGGGATGCGGTGCCTTATCCAGCACCTGTGGTCAGC...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GTTTTCATAACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGCTGACCACAGGTGCTaGATAAGGCACCGCATCCCA +
Preference number: 4 (lower is better)
Translates to: VFITSIGYIKVCAVAPAMADHRC*IRHRIP
Trigger: TGGGATGCGGTGCCTTATCCAGCACCTGTGGTCAGC...CATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTTATGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAAAGCCAATGGGTAGCTaGCCAGCTGACCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLKPMGS*PADHRC
Trigger: GCACCTGTGGTCAGCTGGCCAGCTACCCATTGGCTT...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTAAGCCAATGGGTAGCTaGCCAGCTGACCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLKPMGS*PADHRC
Trigger: GCACCTGTGGTCAGCTGGCCAGCTACCCATTGGCTT...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATAAGCCAATGGGTAGCTaGCCAGCTGACCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNKPMGS*PADHRC
Trigger: GCACCTGTGGTCAGCTGGCCAGCTACCCATTGGCTT...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTTCTCACCAAAGCCAATaGGTAGCTGGCCAGCTGACC +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRISHQSQ*VAGQLT
Trigger: GGTCAGCTGGCCAGCTACCCATTGGCTTTGGTGAGA...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGTCTCACCAAAGCCAATaGGTAGCTGGCCAGCTGACC +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRSHQSQ*VAGQLT
Trigger: GGTCAGCTGGCCAGCTACCCATTGGCTTTGGTGAGA...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTGCTCTGGGTCCCCCTTaGTACTGTGAACCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KGKQRCSAEADTSQRISFALGPP*YCEPQG
Trigger: GCCCTGGGGTTCACAGTACCAAGGGGGACCCAGAGC...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CCA 90 bp CCTTTCCTGGGCTGCTTCCAGCCAATGATTGGACATGGTGGGGAACTCCAACTGAGAAAACAAAGAACCTaGGATGGATTCAGGACAAAA +
Preference number: 4 (lower is better)
Translates to: PFLGCFQPMIGHGGELQLRKQRT*DGFRTK
Trigger: TTTTGTCCTGAATCCATCCCAGGTTCTTTGTTTTCT...CAGTTGGAGTTCCCCACCATGTCCAATCATTGGCTGGAAGCAGCCCAGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp CAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGACCCACTCTTCTCAACAGGAAGTaGGGGAAACACGCGATTGGT +
Preference number: 4 (lower is better)
Translates to: QLRKRSNVCAFIQNLGPTLLNRK*GKHAIG
Trigger: ACCAATCGCGTGTTTCCCCCACTTCCTGTTGAGAAG...AGTGGGTCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTCCTTCTAACATGGCTTaGGCCTGCATGCGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIPSNMA*ACMRVL
Trigger: GAGAACTCGCATGCAGGCTCAAGCCATGTTAGAAGG...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp GAGTACTGCCCAGTTTTGCCTACAGCCAGCCTGGTTTTCATAACCTCCATTGGAATGCTCTGCAGAAGCTaGTACAAGTCAAAGGATTTC +
Preference number: 4 (lower is better)
Translates to: EYCPVLPTASLVFITSIGMLCRS*YKSKDF
Trigger: GAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCAT...TCCAATGGAGGTTATGAAAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp CAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGACCCACTGGACCCACTGAAGTCTaGCAGCTAAAACGGATTACA +
Preference number: 4 (lower is better)
Translates to: QLRKRSNVCAFIQNLGPTGPTEV*QLKRIT
Trigger: TGTAATCCGTTTTAGCTGTCAGACTTCAGTGGGTCC...AGTGGGTCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTCCTCCTGCCAAAAGCTaGCTCCACCATTGTCCGGAT +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLPPAKS*LHHCPD
Trigger: ATCCGGACAATGGTGGAGGCAGCTTTTGGCAGGAGG...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTACCAGCAATGCCTCCTaGCAAAAGCTGCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLTSNAS*QKLPPP
Trigger: TGGTGGAGGCAGCTTTTGGCAGGAGGCATTGCTGGT...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAAGACAGCACCAGCAATaGCTCCTGCCAAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLRQHQQ*LLPKAA
Trigger: GGCAGCTTTTGGCAGGAGGCATTGCTGGTGCTGTCT...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATGGTCCAAAGGGGCAGTaGTTGTTCGAGAGACAGCAC +
Preference number: 4 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNGPKGQ*LFERQH
Trigger: GTGCTGTCTCTCGAACAAGCACTGCCCCTTTGGACC...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCAGTACTGCCCAGTTTTaGCTACAGCCAGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFSTAQF*LQPAWF
Trigger: AAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACT...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCCAGCTGACCACAGGTaGTGGATAAGGCACCGCATC +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFPADHR*WIRHRI
Trigger: GATGCGGTGCCTTATCCAGCACCTGTGGTCAGCTGG...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAACCAGCTGACCACAGGTaGTGGATAAGGCACCGCATC +
Preference number: 4 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVEPADHR*WIRHRI
Trigger: GATGCGGTGCCTTATCCAGCACCTGTGGTCAGCTGG...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGTGGCTTGAGCCTGCATaGGAGTTCTCACCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRWLEPA*EFSPKP
Trigger: TGGCTTTGGTGAGAACTCGCATGCAGGCTCAAGCCA...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCGCTGACCACAGGTGCTaGATAAGGCACCGCATCCCA +
Preference number: 4 (lower is better)
Translates to: PAAFQSNGRINGIFQINCADHRC*IRHRIP
Trigger: TGGGATGCGGTGCCTTATCCAGCACCTGTGGTCAGC...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTGCTGACCACAGGTGCTaGATAAGGCACCGCATCCCA +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFADHRC*IRHRIP
Trigger: TGGGATGCGGTGCCTTATCCAGCACCTGTGGTCAGC...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCAAGCCAATGGGTAGCTaGCCAGCTGACCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: PAAFQSNGRINGIFQINCKPMGS*PADHRC
Trigger: GCACCTGTGGTCAGCTGGCCAGCTACCCATTGGCTT...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCTCACCAAAGCCAATaGGTAGCTGGCCAGCTGACC +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLSHQSQ*VAGQLT
Trigger: GGTCAGCTGGCCAGCTACCCATTGGCTTTGGTGAGA...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGCCTCTAGAGATTGAATaGCCCCTACATCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRPLEIE*PLHPPG
Trigger: GCCTGGAGGATGTAGGGGCCATTCAATCTCTAGAGG...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS-3UTR CCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAACAGGGACAGGTGTGTaGGCAGGGAACTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVETGTGV*AGNCQC
Trigger: ACACTGGCAGTTCCCTGCCCACACACCTGTCCCTGT...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CCA 90 bp GAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGACCCACTGAAGTCTTCGTGGTTGCACACCTaGGATGGCGATTCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: ERDRMCAPLYKTWDPLKSSWLHT*DGDSAL
Trigger: TAAAGCAGAATCGCCATCCCAGGTGTGCAACCACGA...AGACTTCAGTGGGTCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCCTTCTAACATGGCTTaGGCCTGCATGCGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNPSNMA*ACMRVL
Trigger: GAGAACTCGCATGCAGGCTCAAGCCATGTTAGAAGG...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp GTTTTCATAACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGCCTTCTAACATGGCTTaGGCCTGCATGCGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: VFITSIGYIKVCAVAPAMPSNMA*ACMRVL
Trigger: GAGAACTCGCATGCAGGCTCAAGCCATGTTAGAAGG...CATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTTATGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp AACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGACATAAACCACATAACTaGTGCCTACAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: NLHWIYKSLCSCSSHGTRHKPHN*CLQQGA
Trigger: TGCTCCCTGCTGTAGGCATCAGTTATGTGGTTTATG...TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTGCTTCCTCTAGAGATTaGATGGCCCCTACATCCTCC +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLASSRD*MAPTSS
Trigger: GGAGGATGTAGGGGCCATTCAATCTCTAGAGGAAGC...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS-3UTR TCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAGCTTCCTCTAGAGATTaGATGGCCCCTACATCCTCC +
Preference number: 4 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLASSRD*MAPTSS
Trigger: GGAGGATGTAGGGGCCATTCAATCTCTAGAGGAAGC...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS-3UTR TCA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCTACTCCACGGCAAAATaGGCCTGGCCAATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PAAFQSNGRINGIFQINCYSTAK*AWPILR
Trigger: CCTCAGGATTGGCCAGGCTCATTTTGCCGTGGAGTA...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR TCA 90 bp ACAAAGCAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGACAAAGGCACCTACTGTaGGGAACACAGTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: TKQLRKRSNVCAFIQNLGQRHLL*GTQLTS
Trigger: GGAAGTCAACTGTGTTCCTCACAGTAGGTGCCTTTG...TCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTGCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp AACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGAATCCCCATCCCAGAATaGAGGAAAATGAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: NLHWIYKSLCSCSSHGTRIPIPE*RKMRPQ
Trigger: CTGAGGTCTCATTTTCCTTCATTCTGGGATGGGGAT...TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCACCAGCAATGCCTCCTaGCAAAAGCTGCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: PAAFQSNGRINGIFQINCTSNAS*QKLPPP
Trigger: TGGTGGAGGCAGCTTTTGGCAGGAGGCATTGCTGGT...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTACCAGCAATGCCTCCTaGCAAAAGCTGCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFTSNAS*QKLPPP
Trigger: TGGTGGAGGCAGCTTTTGGCAGGAGGCATTGCTGGT...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTGGTCCAAAGGGGCAGTaGTTGTTCGAGAGACAGCAC +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFGPKGQ*LFERQH
Trigger: GTGCTGTCTCTCGAACAAGCACTGCCCCTTTGGACC...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCGGTCCAAAGGGGCAGTaGTTGTTCGAGAGACAGCAC +
Preference number: 4 (lower is better)
Translates to: PAAFQSNGRINGIFQINCGPKGQ*LFERQH
Trigger: GTGCTGTCTCTCGAACAAGCACTGCCCCTTTGGACC...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCAGCTGACCACAGGTaGTGGATAAGGCACCGCATC +
Preference number: 4 (lower is better)
Translates to: KGKQRCSAEADTSQRISFPADHR*WIRHRI
Trigger: GATGCGGTGCCTTATCCAGCACCTGTGGTCAGCTGG...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATTGGCTTGAGCCTGCATaGGAGTTCTCACCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNWLEPA*EFSPKP
Trigger: TGGCTTTGGTGAGAACTCGCATGCAGGCTCAAGCCA...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTATGGCTTGAGCCTGCATaGGAGTTCTCACCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLWLEPA*EFSPKP
Trigger: TGGCTTTGGTGAGAACTCGCATGCAGGCTCAAGCCA...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGGACGAACGGGATCTCTaGCCACCACACACGTCCAGT +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRDERDL*PPHTSS
Trigger: ACTGGACGTGTGTGGTGGGCAGAGATCCCGTTCGTC...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS-3UTR GCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAATTGCACACAGAGCTaGCTTGTGCAGCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRINCTQS*LVQLWT
Trigger: TGTCCACAGCTGCACAAGGCAGCTCTGTGTGCAATT...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR GCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGGCCTCAGATTCCCCCTaGATCATGATTTTCAGACGG +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRASDSP*IMIFRR
Trigger: CCGTCTGAAAATCATGATGCAGGGGGAATCTGAGGC...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTGCCTCAGATTCCCCCTaGATCATGATTTTCAGACGG +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIASDSP*IMIFRR
Trigger: CCGTCTGAAAATCATGATGCAGGGGGAATCTGAGGC...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCCTCTAGAGATTGAATaGCCCCTACATCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNPLEIE*PLHPPG
Trigger: GCCTGGAGGATGTAGGGGCCATTCAATCTCTAGAGG...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS-3UTR CCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCGTCAGACCCAGTGTCTaGAGAGACTGGACAATTTCT +
Preference number: 4 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFVRPSV*RDWTIS
Trigger: AGAAATTGTCCAGTCTCTCCAGACACTGGGTCTGAC...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGCCAATCCTGAGGCTCTaGGTCCCCCTTGGTACTGTG +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRPILRL*VPLGTV
Trigger: CACAGTACCAAGGGGGACCCAGAGCCTCAGGATTGG...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCAATCCTGAGGCTCTaGGTCCCCCTTGGTACTGTG +
Preference number: 4 (lower is better)
Translates to: KGKQRCSAEADTSQRISFPILRL*VPLGTV
Trigger: CACAGTACCAAGGGGGACCCAGAGCCTCAGGATTGG...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CCA 90 bp TTAACAGTGCCCGTGGGCCAGAGTGTCCACAACACTCATTTTATCTGGACAAATGTTGCACACCTGGGATaGCGATTCTGCTTTAAAAAG +
Preference number: 4 (lower is better)
Translates to: LTVPVGQSVHNTHFIWTNVAHLG*RFCFKK
Trigger: CTTTTTAAAGCAGAATCGCCATCCCAGGTGTGCAAC...ATTTGTCCAGATAAAATGAGTGTTGTGGACACTCTGGCCCACGGGCACTGTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp TTAACAGTGCCCGTGGGCCAGAGTGTCCACAACACTCATTTTATCTGGACAAATCAACTGGGCCATTTCTaGGACAATCAGCACAAAGTA +
Preference number: 4 (lower is better)
Translates to: LTVPVGQSVHNTHFIWTNQLGHF*DNQHKV
Trigger: TACTTTGTGCTGATTGTCCCAGAAATGGCCCAGTTG...ATTTGTCCAGATAAAATGAGTGTTGTGGACACTCTGGCCCACGGGCACTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTGAAAAGTCAATTCTCTaGGCCTCAGATTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIEKSIL*ASDSPC
Trigger: GCAGGGGGAATCTGAGGCCCAGAGAATTGACTTTTC...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCCTTCTAACATGGCTTaGGCCTGCATGCGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFPSNMA*ACMRVL
Trigger: GAGAACTCGCATGCAGGCTCAAGCCATGTTAGAAGG...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAACCTTCTAACATGGCTTaGGCCTGCATGCGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVEPSNMA*ACMRVL
Trigger: GAGAACTCGCATGCAGGCTCAAGCCATGTTAGAAGG...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGCATAAACCACATAACTaGTGCCTACAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRHKPHN*CLQQGA
Trigger: TGCTCCCTGCTGTAGGCATCAGTTATGTGGTTTATG...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTCATAAACCACATAACTaGTGCCTACAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIHKPHN*CLQQGA
Trigger: TGCTCCCTGCTGTAGGCATCAGTTATGTGGTTTATG...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATACTCCACGGCAAAATaGGCCTGGCCAATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KQILFKPVHFQISDSGQRYSTAK*AWPILR
Trigger: CCTCAGGATTGGCCAGGCTCATTTTGCCGTGGAGTA...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR TCA 90 bp ACAAAGCAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGAAAACTTGGGACCCACTaGAGTCTGACAGCTAAAACG +
Preference number: 4 (lower is better)
Translates to: TKQLRKRSNVCAFIQNLGKLGTH*SLTAKT
Trigger: CGTTTTAGCTGTCAGACTTCAGTGGGTCCCAAGTTT...TCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTGCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp AAGGCACCTACTGTGAGGAACACAGTTGACTTCCACTCTCTAGCCTCTAACCCTAATTCTCAAGCTTTTTaGTCTCAGGATCCCTTTACA +
Preference number: 4 (lower is better)
Translates to: KAPTVRNTVDFHSLASNPNSQAF*SQDPFT
Trigger: TGTAAAGGGATCCTGAGATCAAAAAGCTTGAGAATT...AGGGTTAGAGGCTAGAGAGTGGAAGTCAACTGTGTTCCTCACAGTAGGTGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTAGGTTTCATGCAGCATaGGAACCAGGAGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFRFHAA*EPGALE
Trigger: CTCCAGTGCTCCTGGTTCTCATGCTGCATGAAACCT...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGACCTCCTGCCAAAAGCTaGCTCCACCATTGTCCGGAT +
Preference number: 4 (lower is better)
Translates to: KQILFKPVHFQISDSGQRPPAKS*LHHCPD
Trigger: ATCCGGACAATGGTGGAGGCAGCTTTTGGCAGGAGG...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGACCAGCAATGCCTCCTaGCAAAAGCTGCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRTSNAS*QKLPPP
Trigger: TGGTGGAGGCAGCTTTTGGCAGGAGGCATTGCTGGT...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTACCAGCAATGCCTCCTaGCAAAAGCTGCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: KGKQRCSAEADTSQRISFTSNAS*QKLPPP
Trigger: TGGTGGAGGCAGCTTTTGGCAGGAGGCATTGCTGGT...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGAGACAGCACCAGCAATaGCTCCTGCCAAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRRQHQQ*LLPKAA
Trigger: GGCAGCTTTTGGCAGGAGGCATTGCTGGTGCTGTCT...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGAAGACAGCACCAGCAATaGCTCCTGCCAAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KQILFKPVHFQISDSGQRRQHQQ*LLPKAA
Trigger: GGCAGCTTTTGGCAGGAGGCATTGCTGGTGCTGTCT...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTAGACAGCACCAGCAATaGCTCCTGCCAAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KGKQRCSAEADTSQRISFRQHQQ*LLPKAA
Trigger: GGCAGCTTTTGGCAGGAGGCATTGCTGGTGCTGTCT...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGAGGTCCAAAGGGGCAGTaGTTGTTCGAGAGACAGCAC +
Preference number: 4 (lower is better)
Translates to: KQILFKPVHFQISDSGQRGPKGQ*LFERQH
Trigger: GTGCTGTCTCTCGAACAAGCACTGCCCCTTTGGACC...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAAAAGTCTGTGCAGTTaGTCCAGCCATGGAACCAGA +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIKSLCS*SSHGTR
Trigger: TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTT...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGAAAAGTCTGTGCAGTTaGTCCAGCCATGGAACCAGA +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRKSLCS*SSHGTR
Trigger: TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTT...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGCCAGCTGACCACAGGTaGTGGATAAGGCACCGCATC +
Preference number: 4 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQPADHR*WIRHRI
Trigger: GATGCGGTGCCTTATCCAGCACCTGTGGTCAGCTGG...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp CAAGGGCTGCTCAGGAAAGGCCAAAATGTTTGGAAAGACTACATGGAGCCAGCTGTATTGGAGTTGAAATaGAGAATTTCTCTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: QGLLRKGQNVWKDYMEPAVLELK*RISLQS
Trigger: AGACTGCAGAGAAATTCTGCATTTCAACTCCAATAC...AGCTGGCTCCATGTAGTCTTTCCAAACATTTTGGCCTTTCCTGAGCAGCCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR GCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATAATTGCACACAGAGCTaGCTTGTGCAGCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNNCTQS*LVQLWT
Trigger: TGTCCACAGCTGCACAAGGCAGCTCTGTGTGCAATT...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR GCA 90 bp AAGGCACCTACTGTGAGGAACACAGTTGACTTCCACTCTCTAGCCTCTAACCCTAAGAGATCGAATGTGTaGGCCTTTATACAAAACTTG +
Preference number: 4 (lower is better)
Translates to: KAPTVRNTVDFHSLASNPKRSNV*AFIQNL
Trigger: CAAGTTTTGTATAAAGGCGCACACATTCGATCTCTT...AGGGTTAGAGGCTAGAGAGTGGAAGTCAACTGTGTTCCTCACAGTAGGTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp CAAAAGTGTCTTAAAAATTTAACAGTGCCCGTGGGCCAGAGTGTCCACAACACTCTTTGGATAAGAGAATaGCAGTGTCAGGGAACGCTT +
Preference number: 4 (lower is better)
Translates to: QKCLKNLTVPVGQSVHNTLWIRE*QCQGTL
Trigger: AAGCGTTCCCTGACACTGGCATTCTCTTATCCAAAG...AGTGTTGTGGACACTCTGGCCCACGGGCACTGTTAAATTTTTAAGACACTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGAAGCCAATGGGTAGCTaGCCAGCTGACCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQKPMGS*PADHRC
Trigger: GCACCTGTGGTCAGCTGGCCAGCTACCCATTGGCTT...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GAGTACTGCCCAGTTTTGCCTACAGCCAGCCTGGTTTTCATAACCTCCATTGGAATGCAACATCATTTCTaGGTTACTCCTAAAGTTTGC +
Preference number: 4 (lower is better)
Translates to: EYCPVLPTASLVFITSIGMQHHF*VTPKVC
Trigger: GCAAACTTTAGGAGTAACCCAGAAATGATGTTGCAT...TCCAATGGAGGTTATGAAAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GAGTACTGCCCAGTTTTGCCTACAGCCAGCCTGGTTTTCATAACCTCCATTGGATGCTTTTCAAAGCAATaGCAGGATAAACGGAATCTT +
Preference number: 4 (lower is better)
Translates to: EYCPVLPTASLVFITSIGCFSKQ*QDKRNL
Trigger: AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCA...TCCAATGGAGGTTATGAAAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTCATCGGTTAAAGCTCTaGAAGGAGAGGGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLHRLKL*KERAHP
Trigger: AGGATGAGCCCTCTCCTTCCAGAGCTTTAACCGATG...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS-3UTR CCA 90 bp ACAAAGCAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGACGGGGTCTTGAAGACTaGTTACTCCACTTAAAGACC +
Preference number: 4 (lower is better)
Translates to: TKQLRKRSNVCAFIQNLGRGLED*LLHLKT
Trigger: GGTCTTTAAGTGGAGTAACCAGTCTTCAAGACCCCG...TCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTGCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
3UTR CAA 72 bp TATGCCCAGAATTTAACAGCTGTCTCAGGAGCAATTTaGATGACGTTTGTACCATTTCCCCTCCAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: YAQNLTAVSGAI*MTFVPFPLQSE
Trigger: CTCGCTTTGGAGGGGAAATGGTACAAACGTCATCAAAATTGCTCCTGAGACAGCTGTTAAATTCTGGGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
3UTR CAA 72 bp TTGGCACAATCATATATTCCAGAGTACTGCCCAGTTTaGCCTACAGCCAGCCTGGTTTTCATAACCTCCATT +
Preference number: 4 (lower is better)
Translates to: LAQSYIPEYCPV*PTASLVFITSI
Trigger: AATGGAGGTTATGAAAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTCTGGAATATATGATTGTGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTACGTGAACCTGCATCATaGTTTTCAGACGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLREPAS*FSDGPK
Trigger: CTTTGGACCGTCTGAAAATCATGATGCAGGTTCACG...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
CDS-3UTR TCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTCGTGAACCTGCATCATaGTTTTCAGACGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLREPAS*FSDGPK
Trigger: CTTTGGACCGTCTGAAAATCATGATGCAGGTTCACG...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
CDS-3UTR TCA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGACCTTCTAACATGGCTTaGGCCTGCATGCGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: KQILFKPVHFQISDSGQRPSNMA*ACMRVL
Trigger: GAGAACTCGCATGCAGGCTCAAGCCATGTTAGAAGG...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCATGCTCTGCAGAAGCTaGTACAAGTCAAAGGATTTC +
Preference number: 4 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFMLCRS*YKSKDF
Trigger: GAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCAT...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp AACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGACCCAAGAAGTCTTCCTaGCTAAAACGGAATCTGATT +
Preference number: 4 (lower is better)
Translates to: NLHWIYKSLCSCSSHGTRPKKSS*LKRNLI
Trigger: AATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGG...TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAATCCTCCAGGCCTTCCTaGAGCTCAAAAATGTCCAAG +
Preference number: 4 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVESSRPS*SSKMSK
Trigger: CTTGGACATTTTTGAGCTTCAGGAAGGCCTGGAGGA...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS-3UTR TCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTATCCCCATCCCAGAATaGAGGAAAATGAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLIPIPE*RKMRPQ
Trigger: CTGAGGTCTCATTTTCCTTCATTCTGGGATGGGGAT...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGACCAGCAATGCCTCCTaGCAAAAGCTGCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQTSNAS*QKLPPP
Trigger: TGGTGGAGGCAGCTTTTGGCAGGAGGCATTGCTGGT...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTAAAAGTCTGTGCAGTTaGTCCAGCCATGGAACCAGA +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLKSLCS*SSHGTR
Trigger: TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTT...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCAGTACTGCCCAGTTTTaGCTACAGCCAGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: PAAFQSNGRINGIFQINCSTAQF*LQPAWF
Trigger: AAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACT...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTACTGCCCAGTTTTaGCTACAGCCAGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVESTAQF*LQPAWF
Trigger: AAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACT...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATGGCTTGAGCCTGCATaGGAGTTCTCACCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: KQILFKPVHFQISDSGQRWLEPA*EFSPKP
Trigger: TGGCTTTGGTGAGAACTCGCATGCAGGCTCAAGCCA...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGTGGCTTGAGCCTGCATaGGAGTTCTCACCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRWLEPA*EFSPKP
Trigger: TGGCTTTGGTGAGAACTCGCATGCAGGCTCAAGCCA...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCGATTTCGTTTCCTGCTaGTTTTCAAAGCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFDFVSC*FSKQWQ
Trigger: CTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATC...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTTGGAGGCAAAGATACTaGATTCCCCCTCTCATTTGT +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIWRQRY*IPPLIC
Trigger: ACAAATGAGAGGGGGAATGCAGTATCTTTGCCTCCA...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGTCTCACCAAAGCCAATaGGTAGCTGGCCAGCTGACC +
Preference number: 4 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQSHQSQ*VAGQLT
Trigger: GGTCAGCTGGCCAGCTACCCATTGGCTTTGGTGAGA...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCATCGGTTAAAGCTCTaGAAGGAGAGGGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFHRLKL*KERAHP
Trigger: AGGATGAGCCCTCTCCTTCCAGAGCTTTAACCGATG...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS-3UTR CCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAGTCAGACCCAGTGTCTaGAGAGACTGGACAATTTCT +
Preference number: 4 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLVRPSV*RDWTIS
Trigger: AGAAATTGTCCAGTCTCTCCAGACACTGGGTCTGAC...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATGTCAGACCCAGTGTCTaGAGAGACTGGACAATTTCT +
Preference number: 4 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNVRPSV*RDWTIS
Trigger: AGAAATTGTCCAGTCTCTCCAGACACTGGGTCTGAC...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AGTGTCCACAACACTCATTTTATCTGGACAAATACCAGTAGACTTTCGTATTATCTGGAAACTGGGCCATaGAGGGCATTGTCTCTCACG +
Preference number: 4 (lower is better)
Translates to: SVHNTHFIWTNTSRLSYYLETGP*RALSLT
Trigger: CGTGAGAGACAATGCCCTCCATGGCCCAGTTTCCAG...ATAATACGAAAGTCTACTGGTATTTGTCCAGATAAAATGAGTGTTGTGGACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp GAATGTCTTAAACAATGGAATGCCGCCATTCCTTCTCAACAGGAAGTGGGGGAAGAATGTCTTAAACAATaGAATGCCGCCATTCCTTCT +
Preference number: 4 (lower is better)
Translates to: ECLKQWNAAIPSQQEVGEECLKQ*NAAIPS
Trigger: AGAAGGAATGGCGGCATTCCATTGTTTAAGACATTC...TTCCCCCACTTCCTGTTGAGAAGGAATGGCGGCATTCCATTGTTTAAGACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp ACAAAGCAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGAACGCTTCAACAGGGTTaGAGAAGTTCCACATATCTC +
Preference number: 4 (lower is better)
Translates to: TKQLRKRSNVCAFIQNLGTLQQG*RSSTYL
Trigger: GAGATATGTGGAACTTCTCCAACCCTGTTGAAGCGT...TCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTGCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTGAAAAGTCAATTCTCTaGGCCTCAGATTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFEKSIL*ASDSPC
Trigger: GCAGGGGGAATCTGAGGCCCAGAGAATTGACTTTTC...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTGAACCTGCATCATaGTTTTCAGACGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFREPAS*FSDGPK
Trigger: CTTTGGACCGTCTGAAAATCATGATGCAGGTTCACG...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
CDS-3UTR TCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAACGTGAACCTGCATCATaGTTTTCAGACGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVEREPAS*FSDGPK
Trigger: CTTTGGACCGTCTGAAAATCATGATGCAGGTTCACG...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
CDS-3UTR TCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCATAAACCACATAACTaGTGCCTACAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFHKPHN*CLQQGA
Trigger: TGCTCCCTGCTGTAGGCATCAGTTATGTGGTTTATG...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTATGCTCTGCAGAAGCTaGTACAAGTCAAAGGATTTC +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIMLCRS*YKSKDF
Trigger: GAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCAT...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp CTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGAAATATGCTCTGCAGAAGCTaGTACAAGTCAAAGGATTTC +
Preference number: 4 (lower is better)
Translates to: LHWIYKSLCSCSSHGTRNMLCRS*YKSKDF
Trigger: GAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCAT...ATTTCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGCCCAAGAAGTCTTCCTaGCTAAAACGGAATCTGATT +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRPKKSS*LKRNLI
Trigger: AATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGG...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCTTGTGCTGCCCATATTaGAAACAGCAAGTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFLCCPY*KQQVQR
Trigger: TCTTTGAACTTGCTGTTTTCAATATGGGCAGCACAA...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTTCCTCCAGGCCTTCCTaGAGCTCAAAAATGTCCAAG +
Preference number: 4 (lower is better)
Translates to: KGKQRCSAEADTSQRISFSSRPS*SSKMSK
Trigger: CTTGGACATTTTTGAGCTTCAGGAAGGCCTGGAGGA...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS-3UTR TCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCAGACTGGACAATTTCTaGAGCCTCAATTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFRLDNF*SLNFSI
Trigger: GATGGAAAAATTGAGGCTTCAGAAATTGTCCAGTCT...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp ATAACAGTTGTTGGCCCTCATAGTAACCTAATCACTTTCCCTCTTTGGATAAGAGGACCCACTGAAGTCTaGCAGCTAAAACGGATTACA +
Preference number: 4 (lower is better)
Translates to: ITVVGPHSNLITFPLWIRGPTEV*QLKRIT
Trigger: TGTAATCCGTTTTAGCTGTCAGACTTCAGTGGGTCC...TCTTATCCAAAGAGGGAAAGTGATTAGGTTACTATGAGGGCCAACAACTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAATTCCCCCTGCATCATaGTTTTCAGACGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVEIPPAS*FSDGPK
Trigger: CTTTGGACCGTCTGAAAATCATGATGCAGGGGGAAT...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCATTCCCCCTGCATCATaGTTTTCAGACGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: PAAFQSNGRINGIFQINCIPPAS*FSDGPK
Trigger: CTTTGGACCGTCTGAAAATCATGATGCAGGGGGAAT...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTAAAAGTCTGTGCAGTTaGTCCAGCCATGGAACCAGA +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFKSLCS*SSHGTR
Trigger: TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTT...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAAAAGTCTGTGCAGTTaGTCCAGCCATGGAACCAGA +
Preference number: 4 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVEKSLCS*SSHGTR
Trigger: TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTT...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTAGTACTGCCCAGTTTTaGCTACAGCCAGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: KGKQRCSAEADTSQRISFSTAQF*LQPAWF
Trigger: AAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACT...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGAAGTACTGCCCAGTTTTaGCTACAGCCAGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: KQILFKPVHFQISDSGQRSTAQF*LQPAWF
Trigger: AAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACT...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGAGTACTGCCCAGTTTTaGCTACAGCCAGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRSTAQF*LQPAWF
Trigger: AAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACT...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGTGGCTTGAGCCTGCATaGGAGTTCTCACCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQWLEPA*EFSPKP
Trigger: TGGCTTTGGTGAGAACTCGCATGCAGGCTCAAGCCA...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTGATTTCGTTTCCTGCTaGTTTTCAAAGCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIDFVSC*FSKQWQ
Trigger: CTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATC...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCAAGGATTTCGTTTCCTaGTGCTTTTCAAAGCAATGG +
Preference number: 4 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFKDFVS*CFSKQW
Trigger: CCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGACATAAACCACATAACTaGTGCCTACAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: KQILFKPVHFQISDSGQRHKPHN*CLQQGA
Trigger: TGCTCCCTGCTGTAGGCATCAGTTATGTGGTTTATG...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGCATAAACCACATAACTaGTGCCTACAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRHKPHN*CLQQGA
Trigger: TGCTCCCTGCTGTAGGCATCAGTTATGTGGTTTATG...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp TGTTTGGAAAGACTACATGGAGCCAGCTGTAAAAAGCATGATTCAAACTGGTGCCACTCCAGAGATTGTTaGAAGTTTCAATTATCAGGC +
Preference number: 4 (lower is better)
Translates to: CLERLHGASCKKHDSNWCHSRDC*KFQLSG
Trigger: GCCTGATAATTGAAACTTTCAACAATCTCTGGAGTG...GCACCAGTTTGAATCATGCTTTTTACAGCTGGCTCCATGTAGTCTTTCCAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR TCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTATGCTCTGCAGAAGCTaGTACAAGTCAAAGGATTTC +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLMLCRS*YKSKDF
Trigger: GAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCAT...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAATGCTCTGCAGAAGCTaGTACAAGTCAAAGGATTTC +
Preference number: 4 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLMLCRS*YKSKDF
Trigger: GAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCAT...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp GTTTTCATAACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGATGCTCTGCAGAAGCTaGTACAAGTCAAAGGATTTC +
Preference number: 4 (lower is better)
Translates to: VFITSIGYIKVCAVAPAMMLCRS*YKSKDF
Trigger: GAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCAT...CATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTTATGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTCCCAAGAAGTCTTCCTaGCTAAAACGGAATCTGATT +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLPKKSS*LKRNLI
Trigger: AATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGG...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTTTGTGCTGCCCATATTaGAAACAGCAAGTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRILCCPY*KQQVQR
Trigger: TCTTTGAACTTGCTGTTTTCAATATGGGCAGCACAA...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGAAAAGTCTGTGCAGTTaGTCCAGCCATGGAACCAGA +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRKSLCS*SSHGTR
Trigger: TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTT...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp CTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGAAATATATATAAAAGTCTGTaGAGTTGCTCCAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: LHWIYKSLCSCSSHGTRNIYKSL*SCSSHG
Trigger: TCCATGGCTGGAGCAACTGCACAGACTTTTATATAT...ATTTCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTATATATAAAAGTCTGTaGAGTTGCTCCAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIIYKSL*SCSSHG
Trigger: TCCATGGCTGGAGCAACTGCACAGACTTTTATATAT...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAGATTTCGTTTCCTGCTaGTTTTCAAAGCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLDFVSC*FSKQWQ
Trigger: CTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATC...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAAGGATTTCGTTTCCTaGTGCTTTTCAAAGCAATGG +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIKDFVS*CFSKQW
Trigger: CCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGAAGGATTTCGTTTCCTaGTGCTTTTCAAAGCAATGG +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRKDFVS*CFSKQW
Trigger: CCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTCATGATTCAAACTGGTaGCAAACATCTAAGCTAGCT +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIHDSNW*QTSKLA
Trigger: AGCTAGCTTAGATGTTTGGCACCAGTTTGAATCATG...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR GCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGCATGATTCAAACTGGTaGCAAACATCTAAGCTAGCT +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRHDSNW*QTSKLA
Trigger: AGCTAGCTTAGATGTTTGGCACCAGTTTGAATCATG...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR GCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATAATATCTACAAGGGCTaGTCAGGAAAGGCCAAAATG +
Preference number: 4 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNNIYKG*SGKAKM
Trigger: CATTTTGGCCTTTCCTGAGCAGCCCTTGTAGATATT...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CCA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGAGTCAGACCCAGTGTCTaGAGAGACTGGACAATTTCT +
Preference number: 4 (lower is better)
Translates to: KQILFKPVHFQISDSGQRVRPSV*RDWTIS
Trigger: AGAAATTGTCCAGTCTCTCCAGACACTGGGTCTGAC...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGAAAGGCCAAAATGTTTaGAAAGACTACATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRKGQNV*KDYMEP
Trigger: TGGCTCCATGTAGTCTTTCCAAACATTTTGGCCTTT...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CCA 90 bp CAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGACCCACTAAAAGGAGAAACTCCTaGATTTGTTGCAGAAAAGAT +
Preference number: 4 (lower is better)
Translates to: QLRKRSNVCAFIQNLGPTKRRNS*ICCRKD
Trigger: ATCTTTTCTGCAACAAATCCAGGAGTTTCTCCTTTT...AGTGGGTCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CCA 90 bp AGTGTCCACAACACTCATTTTATCTGGACAAATACCAGTAGACTTTCGTATTATTCGTGGTTGCACACCTaGGATGGCGATTCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: SVHNTHFIWTNTSRLSYYSWLHT*DGDSAL
Trigger: TAAAGCAGAATCGCCATCCCAGGTGTGCAACCACGA...ATAATACGAAAGTCTACTGGTATTTGTCCAGATAAAATGAGTGTTGTGGACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR TCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTCACTCCAGAGATTGTTaGAAGTTTCAATTATCAGGC +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLHSRDC*KFQLSG
Trigger: GCCTGATAATTGAAACTTTCAACAATCTCTGGAGTG...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCCCAAGAAGTCTTCCTaGCTAAAACGGAATCTGATT +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFPKKSS*LKRNLI
Trigger: AATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGG...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTTGTGCTGCCCATATTaGAAACAGCAAGTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLLCCPY*KQQVQR
Trigger: TCTTTGAACTTGCTGTTTTCAATATGGGCAGCACAA...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTATTGTGCTGCCCATATTaGAAACAGCAAGTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLLCCPY*KQQVQR
Trigger: TCTTTGAACTTGCTGTTTTCAATATGGGCAGCACAA...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAAGACTGGACAATTTCTaGAGCCTCAATTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLRLDNF*SLNFSI
Trigger: GATGGAAAAATTGAGGCTTCAGAAATTGTCCAGTCT...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATAGACTGGACAATTTCTaGAGCCTCAATTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNRLDNF*SLNFSI
Trigger: GATGGAAAAATTGAGGCTTCAGAAATTGTCCAGTCT...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTTCAACATCAATGCTTTaGAGAATCAACTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRISTSML*RINSAC
Trigger: ACAAGCAGAGTTGATTCTTCAAAGCATTGATGTTGA...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp AGTGTCCACAACACTCATTTTATCTGGACAAATACCAGTAGACTTTCGTATTATAAACTTGGGACCCACTaGAGTCTGACAGCTAAAACG +
Preference number: 4 (lower is better)
Translates to: SVHNTHFIWTNTSRLSYYKLGTH*SLTAKT
Trigger: CGTTTTAGCTGTCAGACTTCAGTGGGTCCCAAGTTT...ATAATACGAAAGTCTACTGGTATTTGTCCAGATAAAATGAGTGTTGTGGACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR GCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTATATATAAAAGTCTGTaGAGTTGCTCCAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLIYKSL*SCSSHG
Trigger: TCCATGGCTGGAGCAACTGCACAGACTTTTATATAT...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTGATTTCGTTTCCTGCTaGTTTTCAAAGCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFDFVSC*FSKQWQ
Trigger: CTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATC...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAGATTTCGTTTCCTGCTaGTTTTCAAAGCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVEDFVSC*FSKQWQ
Trigger: CTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATC...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAAAGGAAAACAAAGATaGTCTGCAGAAGCTGATACA +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRIKGKQR*SAEADT
Trigger: TGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TGTTTGGAAAGACTACATGGAGCCAGCTGTAAAAAGCATGATTCAAACTGGTGCTCCCATCAACATCAATaGTTTGAAGAATCAACTCTG +
Preference number: 4 (lower is better)
Translates to: CLERLHGASCKKHDSNWCSHQHQ*FEESTL
Trigger: CAGAGTTGATTCTTCAAAGCATTGATGTTGATGGGA...GCACCAGTTTGAATCATGCTTTTTACAGCTGGCTCCATGTAGTCTTTCCAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR GCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGTCCCATCAACATCAATaGTTTGAAGAATCAACTCTG +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRSHQHQ*FEESTL
Trigger: CAGAGTTGATTCTTCAAAGCATTGATGTTGATGGGA...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGGTATTGGAGTTGAAATaGAGAATTTCTCTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRVLELK*RISLQS
Trigger: AGACTGCAGAGAAATTCTGCATTTCAACTCCAATAC...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CCA 90 bp TGTTTGGAAAGACTACATGGAGCCAGCTGTAAAAAGCATGATTCAAACTGGTGCTGCTTTTCAAAGCAATaGCAGGATAAACGGAATCTT +
Preference number: 4 (lower is better)
Translates to: CLERLHGASCKKHDSNWCCFSKQ*QDKRNL
Trigger: AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCA...GCACCAGTTTGAATCATGCTTTTTACAGCTGGCTCCATGTAGTCTTTCCAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CCA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTTGCTTTTCAAAGCAATaGCAGGATAAACGGAATCTT +
Preference number: 4 (lower is better)
Translates to: VQASTFSDFGFRAEICRICFSKQ*QDKRNL
Trigger: AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCA...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAACACTCCAGAGATTGTTaGAAGTTTCAATTATCAGGC +
Preference number: 4 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVEHSRDC*KFQLSG
Trigger: GCCTGATAATTGAAACTTTCAACAATCTCTGGAGTG...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCCACTCCAGAGATTGTTaGAAGTTTCAATTATCAGGC +
Preference number: 4 (lower is better)
Translates to: PAAFQSNGRINGIFQINCHSRDC*KFQLSG
Trigger: GCCTGATAATTGAAACTTTCAACAATCTCTGGAGTG...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTATGCTCTGCAGAAGCTaGTACAAGTCAAAGGATTTC +
Preference number: 4 (lower is better)
Translates to: KGKQRCSAEADTSQRISFMLCRS*YKSKDF
Trigger: GAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCAT...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGACCCAAGAAGTCTTCCTaGCTAAAACGGAATCTGATT +
Preference number: 4 (lower is better)
Translates to: KQILFKPVHFQISDSGQRPKKSS*LKRNLI
Trigger: AATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGG...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGCCCAAGAAGTCTTCCTaGCTAAAACGGAATCTGATT +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRPKKSS*LKRNLI
Trigger: AATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGG...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAATTGTGCTGCCCATATTaGAAACAGCAAGTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVELCCPY*KQQVQR
Trigger: TCTTTGAACTTGCTGTTTTCAATATGGGCAGCACAA...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCTTGTGCTGCCCATATTaGAAACAGCAAGTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: PAAFQSNGRINGIFQINCLCCPY*KQQVQR
Trigger: TCTTTGAACTTGCTGTTTTCAATATGGGCAGCACAA...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCAGACTGGACAATTTCTaGAGCCTCAATTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: PAAFQSNGRINGIFQINCRLDNF*SLNFSI
Trigger: GATGGAAAAATTGAGGCTTCAGAAATTGTCCAGTCT...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGACTGGACAATTTCTaGAGCCTCAATTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVERLDNF*SLNFSI
Trigger: GATGGAAAAATTGAGGCTTCAGAAATTGTCCAGTCT...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAACATCAATGCTTTaGAGAATCAACTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLSTSML*RINSAC
Trigger: ACAAGCAGAGTTGATTCTTCAAAGCATTGATGTTGA...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTATCAACATCAATGCTTTaGAGAATCAACTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLSTSML*RINSAC
Trigger: ACAAGCAGAGTTGATTCTTCAAAGCATTGATGTTGA...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTATATATAAAAGTCTGTaGAGTTGCTCCAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFIYKSL*SCSSHG
Trigger: TCCATGGCTGGAGCAACTGCACAGACTTTTATATAT...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGGATTTCGTTTCCTGCTaGTTTTCAAAGCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRDFVSC*FSKQWQ
Trigger: CTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATC...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAAGGATTTCGTTTCCTaGTGCTTTTCAAAGCAATGG +
Preference number: 4 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVEKDFVS*CFSKQW
Trigger: CCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATAAAGGAAAACAAAGATaGTCTGCAGAAGCTGATACA +
Preference number: 4 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNKGKQR*SAEADT
Trigger: TGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAAAAGGAAAACAAAGATaGTCTGCAGAAGCTGATACA +
Preference number: 4 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLKGKQR*SAEADT
Trigger: TGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp GTTTTCATAACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGTCCCATCAACATCAATaGTTTGAAGAATCAACTCTG +
Preference number: 4 (lower is better)
Translates to: VFITSIGYIKVCAVAPAMSHQHQ*FEESTL
Trigger: CAGAGTTGATTCTTCAAAGCATTGATGTTGATGGGA...CATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTTATGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGAAATATCTACAAGGGCTaGTCAGGAAAGGCCAAAATG +
Preference number: 4 (lower is better)
Translates to: KQILFKPVHFQISDSGQRNIYKG*SGKAKM
Trigger: CATTTTGGCCTTTCCTGAGCAGCCCTTGTAGATATT...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATATGCAACATCATTTCTaGGTTACTCCTAAAGTTTGC +
Preference number: 4 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNMQHHF*VTPKVC
Trigger: GCAAACTTTAGGAGTAACCCAGAAATGATGTTGCAT...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTATGCAACATCATTTCTaGGTTACTCCTAAAGTTTGC +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLMQHHF*VTPKVC
Trigger: GCAAACTTTAGGAGTAACCCAGAAATGATGTTGCAT...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCACTCCAGAGATTGTTaGAAGTTTCAATTATCAGGC +
Preference number: 4 (lower is better)
Translates to: KGKQRCSAEADTSQRISFHSRDC*KFQLSG
Trigger: GCCTGATAATTGAAACTTTCAACAATCTCTGGAGTG...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGCACTCCAGAGATTGTTaGAAGTTTCAATTATCAGGC +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRHSRDC*KFQLSG
Trigger: GCCTGATAATTGAAACTTTCAACAATCTCTGGAGTG...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGCCCAAGAAGTCTTCCTaGCTAAAACGGAATCTGATT +
Preference number: 4 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQPKKSS*LKRNLI
Trigger: AATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGG...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTTTGTGCTGCCCATATTaGAAACAGCAAGTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: KGKQRCSAEADTSQRISFLCCPY*KQQVQR
Trigger: TCTTTGAACTTGCTGTTTTCAATATGGGCAGCACAA...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGTTGTGCTGCCCATATTaGAAACAGCAAGTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRLCCPY*KQQVQR
Trigger: TCTTTGAACTTGCTGTTTTCAATATGGGCAGCACAA...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR TCA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCTCAACATCAATGCTTTaGAGAATCAACTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: PAAFQSNGRINGIFQINCSTSML*RINSAC
Trigger: ACAAGCAGAGTTGATTCTTCAAAGCATTGATGTTGA...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGAAAGGATTTCGTTTCCTaGTGCTTTTCAAAGCAATGG +
Preference number: 4 (lower is better)
Translates to: KQILFKPVHFQISDSGQRKDFVS*CFSKQW
Trigger: CCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTAAGGATTTCGTTTCCTaGTGCTTTTCAAAGCAATGG +
Preference number: 4 (lower is better)
Translates to: KGKQRCSAEADTSQRISFKDFVS*CFSKQW
Trigger: CCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTAAAGGAAAACAAAGATaGTCTGCAGAAGCTGATACA +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFKGKQR*SAEADT
Trigger: TGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAAAGGAAAACAAAGATaGTCTGCAGAAGCTGATACA +
Preference number: 4 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVEKGKQR*SAEADT
Trigger: TGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCTCCCATCAACATCAATaGTTTGAAGAATCAACTCTG +
Preference number: 4 (lower is better)
Translates to: PAAFQSNGRINGIFQINCSHQHQ*FEESTL
Trigger: CAGAGTTGATTCTTCAAAGCATTGATGTTGATGGGA...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTATGCAACATCATTTCTaGGTTACTCCTAAAGTTTGC +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFMQHHF*VTPKVC
Trigger: GCAAACTTTAGGAGTAACCCAGAAATGATGTTGCAT...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAATGCAACATCATTTCTaGGTTACTCCTAAAGTTTGC +
Preference number: 4 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVEMQHHF*VTPKVC
Trigger: GCAAACTTTAGGAGTAACCCAGAAATGATGTTGCAT...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAATGCTTTTCAAAGCAATaGCAGGATAAACGGAATCTT +
Preference number: 4 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVECFSKQ*QDKRNL
Trigger: AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCA...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCTGCTTTTCAAAGCAATaGCAGGATAAACGGAATCTT +
Preference number: 4 (lower is better)
Translates to: PAAFQSNGRINGIFQINCCFSKQ*QDKRNL
Trigger: AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCA...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTTGCTTTTCAAAGCAATaGCAGGATAAACGGAATCTT +
Preference number: 4 (lower is better)
Translates to: RTKENKDALQKLIQVKGFCFSKQ*QDKRNL
Trigger: AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCA...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTAAAGGCCAAAATGTTTaGAAAGACTACATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: KGKQRCSAEADTSQRISFKGQNV*KDYMEP
Trigger: TGGCTCCATGTAGTCTTTCCAAACATTTTGGCCTTT...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CCA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTATTTATTCTCTTGACTaGGAGACAAGACTAATAGGT +
Preference number: 4 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLIYSLD*ETRLIG
Trigger: ACCTATTAGTCTTGTCTCCCAGTCAAGAGAATAAAT...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CCA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATATTTATTCTCTTGACTaGGAGACAAGACTAATAGGT +
Preference number: 4 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNIYSLD*ETRLIG
Trigger: ACCTATTAGTCTTGTCTCCCAGTCAAGAGAATAAAT...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR TCA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGCACTCCAGAGATTGTTaGAAGTTTCAATTATCAGGC +
Preference number: 4 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQHSRDC*KFQLSG
Trigger: GCCTGATAATTGAAACTTTCAACAATCTCTGGAGTG...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGATATATAAAAGTCTGTaGAGTTGCTCCAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQIYKSL*SCSSHG
Trigger: TCCATGGCTGGAGCAACTGCACAGACTTTTATATAT...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGAAAAGGAAAACAAAGATaGTCTGCAGAAGCTGATACA +
Preference number: 4 (lower is better)
Translates to: KQILFKPVHFQISDSGQRKGKQR*SAEADT
Trigger: TGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGAATGCAACATCATTTCTaGGTTACTCCTAAAGTTTGC +
Preference number: 4 (lower is better)
Translates to: KQILFKPVHFQISDSGQRMQHHF*VTPKVC
Trigger: GCAAACTTTAGGAGTAACCCAGAAATGATGTTGCAT...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGAAGCATGATTCAAACTaGTGCCAAACATCTAAGCTA +
Preference number: 4 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRKHDSN*CQTSKL
Trigger: TAGCTTAGATGTTTGGCACCAGTTTGAATCATGCTT...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CCA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTAAGCATGATTCAAACTaGTGCCAAACATCTAAGCTA +
Preference number: 4 (lower is better)
Translates to: KGKQRCSAEADTSQRISFKHDSN*CQTSKL
Trigger: TAGCTTAGATGTTTGGCACCAGTTTGAATCATGCTT...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR GCA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGAAAGGAAAACAAAGATaGTCTGCAGAAGCTGATACA +
Preference number: 4 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQKGKQR*SAEADT
Trigger: TGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR GCA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGTCCCATCAACATCAATaGTTTGAAGAATCAACTCTG +
Preference number: 4 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQSHQHQ*FEESTL
Trigger: CAGAGTTGATTCTTCAAAGCATTGATGTTGATGGGA...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGTGCTTTTCAAAGCAATaGCAGGATAAACGGAATCTT +
Preference number: 4 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQCFSKQ*QDKRNL
Trigger: AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCA...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CCA 90 bp AGTGTCCACAACACTCATTTTATCTGGACAAATACCAGTAGACTTTCGTATTATAAAAGGAGAAACTCCTaGATTTGTTGCAGAAAAGAT +
Preference number: 4 (lower is better)
Translates to: SVHNTHFIWTNTSRLSYYKRRNS*ICCRKD
Trigger: ATCTTTTCTGCAACAAATCCAGGAGTTTCTCCTTTT...ATAATACGAAAGTCTACTGGTATTTGTCCAGATAAAATGAGTGTTGTGGACACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS GCA 90 bp GAGGCGCAGGCGGCCTGGCCGAGGAAGTCACGGGAGATCGAGGGCTaGGGGGCGAGACCGGGACCAGCGCGAGGCCGGGCTGGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: EAQAAWPRKSREIEG*GARPGPARGRAGRG
Trigger: GCCCCGCCCAGCCCGGCCTCGCGCTGGTCCCGGTCTCGCCCCGCAGCCCTCGATCTCCCGTGACTTCCTCGGCCAGGCCGCCTGCGCCTC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000569674.1
ENST00000639606.1
ENST00000640018.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS TCA 90 bp TGGCCTCGGCGGCACTGGCCGGGCCCGCCTCCAGAGAGCCGGAAGTaGGGGAGCTGGGAGCTGGGTCTCGGGAGGTGCTGTGCGGACCCG +
Preference number: 5 (lower is better)
Translates to: WPRRHWPGPPPESRK*GSWELGLGRCCADP
Trigger: CGGGTCCGCACAGCACCTCCCGAGACCCAGCTCCCAGCTCCCTCACTTCCGGCTCTCTGGAGGCGGGCCCGGCCAGTGCCGCCGAGGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS CCA 90 bp GGCAGGCCGCGGTGGGCAGCACGAAGTCCCGCAGCCAGCGCAACATaGTCCCAGAGGCGCAGGCGGCCTGGCCGAGGAAGTCACGGGAGA +
Preference number: 5 (lower is better)
Translates to: GRPRWAARSPAASAT*SQRRRRPGRGSHGR
Trigger: TCTCCCGTGACTTCCTCGGCCAGGCCGCCTGCGCCTCTGGGACCATGTTGCGCTGGCTGCGGGACTTCGTGCTGCCCACCGCGGCCTGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000569674.1
ENST00000639606.1
ENST00000640018.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS CCA 90 bp AAGTCCCGCAGCCAGCGCAACATGGTCCCAGAGGCGCAGGCGGCCTaGCCGAGGAAGTCACGGGAGATCGAGGGCTGCGGGGCGAGACCG +
Preference number: 5 (lower is better)
Translates to: KSRSQRNMVPEAQAA*PRKSREIEGCGARP
Trigger: CGGTCTCGCCCCGCAGCCCTCGATCTCCCGTGACTTCCTCGGCCAGGCCGCCTGCGCCTCTGGGACCATGTTGCGCTGGCTGCGGGACTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000569674.1
ENST00000639606.1
ENST00000640018.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS GCA 90 bp GTCTCGGGAGGTGCTGTGCGGACCCGGGGTCGACCTCTGCCCAGTTaGCAGTCCCGCTGTCAGCATGCGGGTCCGAGGAAGAGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: VSGGAVRTRGRPLPS*QSRCQHAGPRKRPP
Trigger: TGGGGGCCTCTTCCTCGGACCCGCATGCTGACAGCGGGACTGGCAACTGGGCAGAGGTCGACCCCGGGTCCGCACAGCACCTCCCGAGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp AGTTCCTCCTTCCTCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCGCGGCGCAACAGCGTTaGGGGCGCCGTCGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: SSSFLSWQRLKPPPSSVLAAQQR*GRRRGC
Trigger: GCAACCCCGACGGCGCCCCAAACGCTGTTGCGCCGC...GAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGAGGAAGGAGGAACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS GCA 90 bp GTCAGCATGCGGGTCCGAGGAAGAGGCCCCCAGCAGGTCCAGGGCTaGAGCGTCAGCGCGTCGGTGGCTTGGGAGCGGGGTCTTGAAGAC +
Preference number: 5 (lower is better)
Translates to: VSMRVRGRGPQQVQG*SVSASVAWERGLED
Trigger: GTCTTCAAGACCCCGCTCCCAAGCCACCGACGCGCTGACGCTGCAGCCCTGGACCTGCTGGGGGCCTCTTCCTCGGACCCGCATGCTGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS GCA 90 bp GGAGCTGGGTCTCGGGAGGTGCTGTGCGGACCCGGGGTCGACCTCTaGCCAGTTGCCAGTCCCGCTGTCAGCATGCGGGTCCGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: GAGSREVLCGPGVDL*PVASPAVSMRVRGR
Trigger: TCTTCCTCGGACCCGCATGCTGACAGCGGGACTGGCAACTGGGCAGAGGTCGACCCCGGGTCCGCACAGCACCTCCCGAGACCCAGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp TCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCGCAGTGTCCCCAGTCGACCTCTGCCCAGTaGCCAGTCCCGCTGTCAGCA +
Preference number: 5 (lower is better)
Translates to: SPGNASSRRPPRSSQCPQSTSAQ*PVPLSA
Trigger: TGCTGACAGCGGGACTGGCAACTGGGCAGAGGTCGA...CTGGGGACACTGCGAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS TCA 90 bp AGGGAGTCCATCGAGGATGTCTCCCTCGCAGCTCCGCGGCCTGAGTaGGCCCCAGCGGGGTGGAAGTGCGACCGACGAACGGGATCTCTG +
Preference number: 5 (lower is better)
Translates to: RESIEDVSLAAPRPE*APAGWKCDRRTGSL
Trigger: CAGAGATCCCGTTCGTCGGTCGCACTTCCACCCCGCTGGGGCTCACTCAGGCCGCGGAGCTGCGAGGGAGACATCCTCGATGGACTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS TCA 90 bp GTAGAGGGAGTCCATCGAGGATGTCTCCCTCGCAGCTCCGCGGCCTaGGTGAGCCCCAGCGGGGTGGAAGTGCGACCGACGAACGGGATC +
Preference number: 5 (lower is better)
Translates to: VEGVHRGCLPRSSAA*VSPSGVEVRPTNGI
Trigger: GATCCCGTTCGTCGGTCGCACTTCCACCCCGCTGGGGCTCACTCAGGCCGCGGAGCTGCGAGGGAGACATCCTCGATGGACTCCCTCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS TCA 90 bp CCAGGGCTGCAGCGTCAGCGCGTCGGTGGCTTGGGAGCGGGGTCTTaGAGACTGGTTACTCCACTTAAAGACCCTCTCGGGCCGGAGCCT +
Preference number: 5 (lower is better)
Translates to: PGLQRQRVGGLGAGS*RLVTPLKDPLGPEP
Trigger: AGGCTCCGGCCCGAGAGGGTCTTTAAGTGGAGTAACCAGTCTTCAAGACCCCGCTCCCAAGCCACCGACGCGCTGACGCTGCAGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS CCA 90 bp GGCCCCCAGCAGGTCCAGGGCTGCAGCGTCAGCGCGTCGGTGGCTTaGGAGCGGGGTCTTGAAGACTGGTTACTCCACTTAAAGACCCTC +
Preference number: 5 (lower is better)
Translates to: GPQQVQGCSVSASVA*ERGLEDWLLHLKTL
Trigger: GAGGGTCTTTAAGTGGAGTAACCAGTCTTCAAGACCCCGCTCCCAAGCCACCGACGCGCTGACGCTGCAGCCCTGGACCTGCTGGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS GCA 90 bp AGTGAGCCCCAGCGGGGTGGAAGTGCGACCGACGAACGGGATCTCTaGCCACCACACACGTCCAGTGGGAAGAGGCCTAAGACAGCATCC +
Preference number: 5 (lower is better)
Translates to: SEPQRGGSATDERDL*PPHTSSGKRPKTAS
Trigger: GGATGCTGTCTTAGGCCTCTTCCCACTGGACGTGTGTGGTGGGCAGAGATCCCGTTCGTCGGTCGCACTTCCACCCCGCTGGGGCTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS GCA 90 bp CTCTCGGGCCGGAGCCTTGGCGGTCAGCCCAGAGCTGCTTCTCTCTaGCTGGAAACTGGGCCATGGAGGGCATTGTCTCTCACGGATGTC +
Preference number: 5 (lower is better)
Translates to: LSGRSLGGQPRAASL*LETGPWRALSLTDV
Trigger: GACATCCGTGAGAGACAATGCCCTCCATGGCCCAGTTTCCAGGCAGAGAGAAGCAGCTCTGGGCTGACCGCCAAGGCTCCGGCCCGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS CCA 90 bp TGCAGCGTCAGCGCGTCGGTGGCTTGGGAGCGGGGTCTTGAAGACTaGTTACTCCACTTAAAGACCCTCTCGGGCCGGAGCCTTGGCGGT +
Preference number: 5 (lower is better)
Translates to: CSVSASVAWERGLED*LLHLKTLSGRSLGG
Trigger: ACCGCCAAGGCTCCGGCCCGAGAGGGTCTTTAAGTGGAGTAACCAGTCTTCAAGACCCCGCTCCCAAGCCACCGACGCGCTGACGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp CCTTTCCTGGGCTGCTTCCAGCCAATGATTGGACATGGTGGGGAACTCCAACTGTCTCGGGCCGGAGCCTaGGCGGTCAGCCCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: PFLGCFQPMIGHGGELQLSRAGA*AVSPEL
Trigger: CAGCTCTGGGCTGACCGCCAAGGCTCCGGCCCGAGA...CAGTTGGAGTTCCCCACCATGTCCAATCATTGGCTGGAAGCAGCCCAGGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp CTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCGCAGTGTCCCCAGCAACGCTTCAACAGGGTaGGAGAAGTTCCACATATCT +
Preference number: 5 (lower is better)
Translates to: LLATPQAAALLGPRSVPSNASTG*EKFHIS
Trigger: AGATATGTGGAACTTCTCCAACCCTGTTGAAGCGTT...GCTGGGGACACTGCGAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp CAAGGGCTGCTCAGGAAAGGCCAAAATGTTTGGAAAGACTACATGGAGCCAGCTGCGGCGCAACAGCGTTaGGGGCGCCGTCGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: QGLLRKGQNVWKDYMEPAAAQQR*GRRRGC
Trigger: GCAACCCCGACGGCGCCCCAAACGCTGTTGCGCCGC...AGCTGGCTCCATGTAGTCTTTCCAAACATTTTGGCCTTTCCTGAGCAGCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CAA 90 bp AAGGCACCTACTGTGAGGAACACAGTTGACTTCCACTCTCTAGCCTCTAACCCTGCGGCGCAACAGCGTTaGGGGCGCCGTCGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: KAPTVRNTVDFHSLASNPAAQQR*GRRRGC
Trigger: GCAACCCCGACGGCGCCCCAAACGCTGTTGCGCCGC...AGGGTTAGAGGCTAGAGAGTGGAAGTCAACTGTGTTCCTCACAGTAGGTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp CGGTCGCGGCCCCACGCCCGAGTTTCTGAAGCCACCGGAGCGCTGGGCGCCACACAATTCTCAAGCTTTTaGATCTCAGGATCCCTTTAC +
Preference number: 5 (lower is better)
Translates to: RSRPHARVSEATGALGATQFSSF*ISGSLY
Trigger: GTAAAGGGATCCTGAGATCAAAAAGCTTGAGAATTG...TGTGGCGCCCAGCGCTCCGGTGGCTTCAGAAACTCGGGCGTGGGGCCGCGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp AAGGCACCTACTGTGAGGAACACAGTTGACTTCCACTCTCTAGCCTCTAACCCTTCTCGGGCCGGAGCCTaGGCGGTCAGCCCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: KAPTVRNTVDFHSLASNPSRAGA*AVSPEL
Trigger: CAGCTCTGGGCTGACCGCCAAGGCTCCGGCCCGAGA...AGGGTTAGAGGCTAGAGAGTGGAAGTCAACTGTGTTCCTCACAGTAGGTGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp TCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCGCAGTGTCCCCAGCAATTCTCAAGCTTTTaGATCTCAGGATCCCTTTAC +
Preference number: 5 (lower is better)
Translates to: SPGNASSRRPPRSSQCPQQFSSF*ISGSLY
Trigger: GTAAAGGGATCCTGAGATCAAAAAGCTTGAGAATTG...CTGGGGACACTGCGAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp AACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGAGCGGCGCAACAGCGTTaGGGGCGCCGTCGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: NLHWIYKSLCSCSSHGTRAAQQR*GRRRGC
Trigger: GCAACCCCGACGGCGCCCCAAACGCTGTTGCGCCGC...TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TCGTATTATGACCCACTTCTGTTACCGGGGTCGCCGGTCGCGGCCCCACGCCCGAAACTCCTGGATTTGTaGCAGAAAAGATCAACAGCC +
Preference number: 5 (lower is better)
Translates to: SYYDPLLLPGSPVAAPRPKLLDL*QKRSTA
Trigger: GGCTGTTGATCTTTTCTGCAACAAATCCAGGAGTTT...CGGGCGTGGGGCCGCGACCGGCGACCCCGGTAACAGAAGTGGGTCATAATACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp AGTTCCTCCTTCCTCTCCTGGCAACGCCTCAAGCCGCCGCCCTCCTCGGTCCTCAATCACTTTCCCTCTTaGGATAAGAGAATGCCAGTG +
Preference number: 5 (lower is better)
Translates to: SSSFLSWQRLKPPPSSVLNHFPS*DKRMPV
Trigger: CACTGGCATTCTCTTATCCAAAGAGGGAAAGTGATT...GAGGACCGAGGAGGGCGGCGGCTTGAGGCGTTGCCAGGAGAGGAAGGAGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp GAGTACTGCCCAGTTTTGCCTACAGCCAGCCTGGTTTTCATAACCTCCATTGGAACCACTCCGTCCCCATaGCGGTCCAGTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: EYCPVLPTASLVFITSIGTTPSP*RSSAWK
Trigger: CTTCCAGGCACTGGACCGCAATGGGGACGGAGTGGT...TCCAATGGAGGTTATGAAAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCGCGGCGCAACAGCGTTaGGGGCGCCGTCGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: PAAFQSNGRINGIFQINCAAQQR*GRRRGC
Trigger: GCAACCCCGACGGCGCCCCAAACGCTGTTGCGCCGC...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGACCCACTACCACTCCGTCCCCATaGCGGTCCAGTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: QLRKRSNVCAFIQNLGPTTTPSP*RSSAWK
Trigger: CTTCCAGGCACTGGACCGCAATGGGGACGGAGTGGT...AGTGGGTCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp GAGTACTGCCCAGTTTTGCCTACAGCCAGCCTGGTTTTCATAACCTCCATTGGACCAAAGGGGCAGTGCTaGTTCGAGAGACAGCACCAG +
Preference number: 5 (lower is better)
Translates to: EYCPVLPTASLVFITSIGPKGQC*FERQHQ
Trigger: CTGGTGCTGTCTCTCGAACAAGCACTGCCCCTTTGG...TCCAATGGAGGTTATGAAAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGACCCACTTCGACCTCTGCCCAGTaGCCAGTCCCGCTGTCAGCA +
Preference number: 5 (lower is better)
Translates to: QLRKRSNVCAFIQNLGPTSTSAQ*PVPLSA
Trigger: TGCTGACAGCGGGACTGGCAACTGGGCAGAGGTCGA...AGTGGGTCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGACCACTCCGTCCCCATaGCGGTCCAGTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRTTPSP*RSSAWK
Trigger: CTTCCAGGCACTGGACCGCAATGGGGACGGAGTGGT...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp ACAAAGCAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGAACCACTCCGTCCCCATaGCGGTCCAGTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: TKQLRKRSNVCAFIQNLGTTPSP*RSSAWK
Trigger: CTTCCAGGCACTGGACCGCAATGGGGACGGAGTGGT...TCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTGCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp CTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGAAATACCACTCCGTCCCCATaGCGGTCCAGTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LHWIYKSLCSCSSHGTRNTTPSP*RSSAWK
Trigger: CTTCCAGGCACTGGACCGCAATGGGGACGGAGTGGT...ATTTCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CAAGGGCTGCTCAGGAAAGGCCAAAATGTTTGGAAAGACTACATGGAGCCAGCTAGCAGATGCTGGCAATaGCACACAGAGCTGCCTTGT +
Preference number: 5 (lower is better)
Translates to: QGLLRKGQNVWKDYMEPASRCWQ*HTELPC
Trigger: ACAAGGCAGCTCTGTGTGCAATTGCCAGCATCTGCT...AGCTGGCTCCATGTAGTCTTTCCAAACATTTTGGCCTTTCCTGAGCAGCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CAA 90 bp AGTAGACTTTCGTATTATGACCCACTTCTGTTACCGGGGTCGCCGGTCGCGGCCCACTCCAAAGAGCTTTaGTATATTGTAGGGACCATG +
Preference number: 5 (lower is better)
Translates to: SRLSYYDPLLLPGSPVAAHSKEL*YIVGTM
Trigger: CATGGTCCCTACAATATACAAAAGCTCTTTGGAGTG...GGCCGCGACCGGCGACCCCGGTAACAGAAGTGGGTCATAATACGAAAGTCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTACCACTCCGTCCCCATaGCGGTCCAGTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLTTPSP*RSSAWK
Trigger: CTTCCAGGCACTGGACCGCAATGGGGACGGAGTGGT...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCCCAAAGGGGCAGTGCTaGTTCGAGAGACAGCACCAG +
Preference number: 5 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFPKGQC*FERQHQ
Trigger: CTGGTGCTGTCTCTCGAACAAGCACTGCCCCTTTGG...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TGTTTGGAAAGACTACATGGAGCCAGCTGTAAAAAGCATGATTCAAACTGGTGCGCACACAGAGCTGCCTaGTGCAGCTGTGGACAGGGA +
Preference number: 5 (lower is better)
Translates to: CLERLHGASCKKHDSNWCAHRAA*CSCGQG
Trigger: TCCCTGTCCACAGCTGCACAAGGCAGCTCTGTGTGC...GCACCAGTTTGAATCATGCTTTTTACAGCTGGCTCCATGTAGTCTTTCCAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CAA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAACCACTCCGTCCCCATaGCGGTCCAGTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVETTPSP*RSSAWK
Trigger: CTTCCAGGCACTGGACCGCAATGGGGACGGAGTGGT...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGCCAAAGGGGCAGTGCTaGTTCGAGAGACAGCACCAG +
Preference number: 5 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRPKGQC*FERQHQ
Trigger: CTGGTGCTGTCTCTCGAACAAGCACTGCCCCTTTGG...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGAACCACTCCGTCCCCATaGCGGTCCAGTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: KQILFKPVHFQISDSGQRTTPSP*RSSAWK
Trigger: CTTCCAGGCACTGGACCGCAATGGGGACGGAGTGGT...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTACCAAAGGGGCAGTGCTaGTTCGAGAGACAGCACCAG +
Preference number: 5 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLPKGQC*FERQHQ
Trigger: CTGGTGCTGTCTCTCGAACAAGCACTGCCCCTTTGG...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGGAGTACTGCCCAGTTTaGCCTACAGCCAGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: EWSQEVFLTKTESDSKGREYCPV*PTASLV
Trigger: AACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCGCACACAGAGCTGCCTaGTGCAGCTGTGGACAGGGA +
Preference number: 5 (lower is better)
Translates to: PAAFQSNGRINGIFQINCAHRAA*CSCGQG
Trigger: TCCCTGTCCACAGCTGCACAAGGCAGCTCTGTGTGC...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CAA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAACCAAAGGGGCAGTGCTaGTTCGAGAGACAGCACCAG +
Preference number: 5 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVEPKGQC*FERQHQ
Trigger: CTGGTGCTGTCTCTCGAACAAGCACTGCCCCTTTGG...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GTTTTCATAACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAGTACTGCCCAGTTTaGCCTACAGCCAGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: VFITSIGYIKVCAVAPAMEYCPV*PTASLV
Trigger: AACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC...CATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTTATGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAGCAGATGCTGGCAATaGCACACAGAGCTGCCTTGT +
Preference number: 5 (lower is better)
Translates to: VQASTFSDFGFRAEICRISRCWQ*HTELPC
Trigger: ACAAGGCAGCTCTGTGTGCAATTGCCAGCATCTGCT...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS GCA 90 bp GGTTTCATGCAGCATGAGAACCAGGAGCACTGGAGGCAAAGATACTaGATTCCCCCTCTCATTTGTTGTAAAGGAAAAGTCAATTCTCTG +
Preference number: 5 (lower is better)
Translates to: GFMQHENQEHWRQRY*IPPLICCKGKVNSL
Trigger: CAGAGAATTGACTTTTCCTTTACAACAAATGAGAGGGGGAATGCAGTATCTTTGCCTCCAGTGCTCCTGGTTCTCATGCTGCATGAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGACCAAAGGGGCAGTGCTaGTTCGAGAGACAGCACCAG +
Preference number: 5 (lower is better)
Translates to: KQILFKPVHFQISDSGQRPKGQC*FERQHQ
Trigger: CTGGTGCTGTCTCTCGAACAAGCACTGCCCCTTTGG...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GAGTACTGCCCAGTTTTGCCTACAGCCAGCCTGGTTTTCATAACCTCCATTGGATCAGTAAGTAACTTCTaGTACTGTTCATATGCCCAG +
Preference number: 5 (lower is better)
Translates to: EYCPVLPTASLVFITSIGSVSNF*YCSYAQ
Trigger: CTGGGCATATGAACAGTACAAGAAGTTACTTACTGA...TCCAATGGAGGTTATGAAAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAGAGTACTGCCCAGTTTaGCCTACAGCCAGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVEEYCPV*PTASLV
Trigger: AACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CAAGGGCTGCTCAGGAAAGGCCAAAATGTTTGGAAAGACTACATGGAGCCAGCTCCTGGTATTCCTTCTTaGGAAATAATTCGTCGAAAG +
Preference number: 5 (lower is better)
Translates to: QGLLRKGQNVWKDYMEPAPGIPS*EIIRRK
Trigger: CTTTCGACGAATTATTTCCAAAGAAGGAATACCAGG...AGCTGGCTCCATGTAGTCTTTCCAAACATTTTGGCCTTTCCTGAGCAGCCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CAA 90 bp GAGTACTGCCCAGTTTTGCCTACAGCCAGCCTGGTTTTCATAACCTCCATTGGACCTGGTATTCCTTCTTaGGAAATAATTCGTCGAAAG +
Preference number: 5 (lower is better)
Translates to: EYCPVLPTASLVFITSIGPGIPS*EIIRRK
Trigger: CTTTCGACGAATTATTTCCAAAGAAGGAATACCAGG...TCCAATGGAGGTTATGAAAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AAGGCACCTACTGTGAGGAACACAGTTGACTTCCACTCTCTAGCCTCTAACCCTGAGAAACTCCTGGATTaGTTGCAGAAAAGATCAACA +
Preference number: 5 (lower is better)
Translates to: KAPTVRNTVDFHSLASNPEKLLD*LQKRST
Trigger: TGTTGATCTTTTCTGCAACAAATCCAGGAGTTTCTC...AGGGTTAGAGGCTAGAGAGTGGAAGTCAACTGTGTTCCTCACAGTAGGTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGGAGTACTGCCCAGTTTaGCCTACAGCCAGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIREYCPV*PTASLV
Trigger: AACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGAGAGTACTGCCCAGTTTaGCCTACAGCCAGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: KQILFKPVHFQISDSGQREYCPV*PTASLV
Trigger: AACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GAGTACTGCCCAGTTTTGCCTACAGCCAGCCTGGTTTTCATAACCTCCATTGGATCTTTTGCCATAGACTaGTTTCAATTCGAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: EYCPVLPTASLVFITSIGSFAID*FQFEEK
Trigger: TTTCTCCTCGAATTGAAACAAGTCTATGGCAAAAGA...TCCAATGGAGGTTATGAAAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GAGTACTGCCCAGTTTTGCCTACAGCCAGCCTGGTTTTCATAACCTCCATTGGAAAGAATCAACTCTGCTaGTTGTTCAGAAATAGTCAG +
Preference number: 5 (lower is better)
Translates to: EYCPVLPTASLVFITSIGKNQLC*LFRNSQ
Trigger: CTGACTATTTCTGAACAACAAGCAGAGTTGATTCTT...TCCAATGGAGGTTATGAAAACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGACCCACTTCAGAGAAAATGAAATaGCTCAGTCGCAGGTCAAGT +
Preference number: 5 (lower is better)
Translates to: QLRKRSNVCAFIQNLGPTSEKMK*LSRRSS
Trigger: ACTTGACCTGCGACTGAGCAATTTCATTTTCTCTGA...AGTGGGTCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp TTAACAGTGCCCGTGGGCCAGAGTGTCCACAACACTCATTTTATCTGGACAAATTCAGAGAAAATGAAATaGCTCAGTCGCAGGTCAAGT +
Preference number: 5 (lower is better)
Translates to: LTVPVGQSVHNTHFIWTNSEKMK*LSRRSS
Trigger: ACTTGACCTGCGACTGAGCAATTTCATTTTCTCTGA...ATTTGTCCAGATAAAATGAGTGTTGTGGACACTCTGGCCCACGGGCACTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGAGTACTGCCCAGTTTaGCCTACAGCCAGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQEYCPV*PTASLV
Trigger: AACCAGGCTGGCTGTAGGCAAAACTGGGCAGTACTC...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGACCCACTGAAGTCTAAACTCCTGGATTTGTaGCAGAAAAGATCAACAGCC +
Preference number: 5 (lower is better)
Translates to: ERDRMCAPLYKTWDPLKSKLLDL*QKRSTA
Trigger: GGCTGTTGATCTTTTCTGCAACAAATCCAGGAGTTT...AGACTTCAGTGGGTCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp ACAAAGCAGCTTCGAAAGAGATCGAATGTGTGCGCCTTTATACAAAACTTGGGAAACGCTTCAACAGGGTaGGAGAAGTTCCACATATCT +
Preference number: 5 (lower is better)
Translates to: TKQLRKRSNVCAFIQNLGNASTG*EKFHIS
Trigger: AGATATGTGGAACTTCTCCAACCCTGTTGAAGCGTT...TCCCAAGTTTTGTATAAAGGCGCACACATTCGATCTCTTTCGAAGCTGCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCAGCTTCCCATCTTTGTaGACATCTCCAGTAGTAAAA +
Preference number: 5 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFSFPSL*TSPVVK
Trigger: TTTTACTACTGGAGATGTCAACAAAGATGGGAAGCT...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCTCATTTTGTCTGATTTaGAACCGTGAACCTGCATCA +
Preference number: 5 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFSFCLI*NREPAS
Trigger: TGATGCAGGTTCACGGTTCAAAATCAGACAAAATGA...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
CDS-3UTR CAA 90 bp AACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGATCAGTAAGTAACTTCTaGTACTGTTCATATGCCCAG +
Preference number: 5 (lower is better)
Translates to: NLHWIYKSLCSCSSHGTRSVSNF*YCSYAQ
Trigger: CTGGGCATATGAACAGTACAAGAAGTTACTTACTGA...TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCTCAGTAAGTAACTTCTaGTACTGTTCATATGCCCAG +
Preference number: 5 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFSVSNF*YCSYAQ
Trigger: CTGGGCATATGAACAGTACAAGAAGTTACTTACTGA...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCCCTGGTATTCCTTCTTaGGAAATAATTCGTCGAAAG +
Preference number: 5 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFPGIPS*EIIRRK
Trigger: CTTTCGACGAATTATTTCCAAAGAAGGAATACCAGG...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCTTTGTGCTGCCCATATaGAAAACAGCAAGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFFVLPI*KTASSK
Trigger: CTTTGAACTTGCTGTTTTCAATATGGGCAGCACAAA...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CAAAAGTGTCTTAAAAATTTAACAGTGCCCGTGGGCCAGAGTGTCCACAACACTGAGAAACTCCTGGATTaGTTGCAGAAAAGATCAACA +
Preference number: 5 (lower is better)
Translates to: QKCLKNLTVPVGQSVHNTEKLLD*LQKRST
Trigger: TGTTGATCTTTTCTGCAACAAATCCAGGAGTTTCTC...AGTGTTGTGGACACTCTGGCCCACGGGCACTGTTAAATTTTTAAGACACTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGAGCTTCCCATCTTTGTaGACATCTCCAGTAGTAAAA +
Preference number: 5 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRSFPSL*TSPVVK
Trigger: TTTTACTACTGGAGATGTCAACAAAGATGGGAAGCT...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAGCTTCCCATCTTTGTaGACATCTCCAGTAGTAAAA +
Preference number: 5 (lower is better)
Translates to: VQASTFSDFGFRAEICRISFPSL*TSPVVK
Trigger: TTTTACTACTGGAGATGTCAACAAAGATGGGAAGCT...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TGTTTGGAAAGACTACATGGAGCCAGCTGTAAAAAGCATGATTCAAACTGGTGCAGCTTCCCATCTTTGTaGACATCTCCAGTAGTAAAA +
Preference number: 5 (lower is better)
Translates to: CLERLHGASCKKHDSNWCSFPSL*TSPVVK
Trigger: TTTTACTACTGGAGATGTCAACAAAGATGGGAAGCT...GCACCAGTTTGAATCATGCTTTTTACAGCTGGCTCCATGTAGTCTTTCCAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CAA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTTCATTTTGTCTGATTTaGAACCGTGAACCTGCATCA +
Preference number: 5 (lower is better)
Translates to: VQASTFSDFGFRAEICRISFCLI*NREPAS
Trigger: TGATGCAGGTTCACGGTTCAAAATCAGACAAAATGA...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
CDS-3UTR CAA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGTCAGTAAGTAACTTCTaGTACTGTTCATATGCCCAG +
Preference number: 5 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRSVSNF*YCSYAQ
Trigger: CTGGGCATATGAACAGTACAAGAAGTTACTTACTGA...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGAAATTCAGTAAGTAACTTCTaGTACTGTTCATATGCCCAG +
Preference number: 5 (lower is better)
Translates to: LHWIYKSLCSCSSHGTRNSVSNF*YCSYAQ
Trigger: CTGGGCATATGAACAGTACAAGAAGTTACTTACTGA...ATTTCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGATCTTTTGCCATAGACTaGTTTCAATTCGAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: NLHWIYKSLCSCSSHGTRSFAID*FQFEEK
Trigger: TTTCTCCTCGAATTGAAACAAGTCTATGGCAAAAGA...TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCAAACCCTATACTTATTaGGATGCTTTTGCTGTAAGG +
Preference number: 5 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFKPYTY*DAFAVR
Trigger: CCTTACAGCAAAAGCATCCAAATAAGTATAGGGTTT...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTTTTGTGCTGCCCATATaGAAAACAGCAAGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: VQASTFSDFGFRAEICRIFVLPI*KTASSK
Trigger: CTTTGAACTTGCTGTTTTCAATATGGGCAGCACAAA...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGTTTGTGCTGCCCATATaGAAAACAGCAAGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRFVLPI*KTASSK
Trigger: CTTTGAACTTGCTGTTTTCAATATGGGCAGCACAAA...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAATCAACTCTGCTTGTaGTTCAGAAATAGTCAGACC +
Preference number: 5 (lower is better)
Translates to: VQASTFSDFGFRAEICRINQLCL*FRNSQT
Trigger: GGTCTGACTATTTCTGAACAACAAGCAGAGTTGATT...AATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TGTTTGGAAAGACTACATGGAGCCAGCTGTAAAAAGCATGATTCAAACTGGTGCAATCAACTCTGCTTGTaGTTCAGAAATAGTCAGACC +
Preference number: 5 (lower is better)
Translates to: CLERLHGASCKKHDSNWCNQLCL*FRNSQT
Trigger: GGTCTGACTATTTCTGAACAACAAGCAGAGTTGATT...GCACCAGTTTGAATCATGCTTTTTACAGCTGGCTCCATGTAGTCTTTCCAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CAA 90 bp GATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTCCTGCTGCTTTTCATCAACATCAATGCTTaGAAGAATCAACTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: DALQKLIQVKGFRFLLLFININA*KNQLCL
Trigger: CAAGCAGAGTTGATTCTTCAAAGCATTGATGTTGAT...GAAAAGCAGCAGGAAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGAATCAACATCAATGCTTaGAAGAATCAACTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: NLHWIYKSLCSCSSHGTRININA*KNQLCL
Trigger: CAAGCAGAGTTGATTCTTCAAAGCATTGATGTTGAT...TCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAAGCTTCCCATCTTTGTaGACATCTCCAGTAGTAAAA +
Preference number: 5 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLSFPSL*TSPVVK
Trigger: TTTTACTACTGGAGATGTCAACAAAGATGGGAAGCT...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATAGCTTCCCATCTTTGTaGACATCTCCAGTAGTAAAA +
Preference number: 5 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNSFPSL*TSPVVK
Trigger: TTTTACTACTGGAGATGTCAACAAAGATGGGAAGCT...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAGTCTCAGGAGCAATTTaGATGACGTTTGTACCATTT +
Preference number: 5 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLVSGAI*MTFVPF
Trigger: AAATGGTACAAACGTCATCAAAATTGCTCCTGAGAC...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GTTTTCATAACCTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGTCTCAGGAGCAATTTaGATGACGTTTGTACCATTT +
Preference number: 5 (lower is better)
Translates to: VFITSIGYIKVCAVAPAMVSGAI*MTFVPF
Trigger: AAATGGTACAAACGTCATCAAAATTGCTCCTGAGAC...CATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAGGTTATGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTCCTGGTATTCCTTCTTaGGAAATAATTCGTCGAAAG +
Preference number: 5 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLPGIPS*EIIRRK
Trigger: CTTTCGACGAATTATTTCCAAAGAAGGAATACCAGG...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGAAATTCACTCCAGAGATTGTaGAAAGTTTCAATTATCAGG +
Preference number: 5 (lower is better)
Translates to: LHWIYKSLCSCSSHGTRNSLQRL*KVSIIR
Trigger: CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGA...ATTTCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGAAATTCTTTTGCCATAGACTaGTTTCAATTCGAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: LHWIYKSLCSCSSHGTRNSFAID*FQFEEK
Trigger: TTTCTCCTCGAATTGAAACAAGTCTATGGCAAAAGA...ATTTCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CTCCATTGGATATATAAAAGTCTGTGCAGTTGCTCCAGCCATGGAACCAGAAATAAACCCTATACTTATTaGGATGCTTTTGCTGTAAGG +
Preference number: 5 (lower is better)
Translates to: LHWIYKSLCSCSSHGTRNKPYTY*DAFAVR
Trigger: CCTTACAGCAAAAGCATCCAAATAAGTATAGGGTTT...ATTTCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264128.13
ENST00000639606.1
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTTTGTGCTGCCCATATaGAAAACAGCAAGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLFVLPI*KTASSK
Trigger: CTTTGAACTTGCTGTTTTCAATATGGGCAGCACAAA...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTATTTGTGCTGCCCATATaGAAAACAGCAAGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLFVLPI*KTASSK
Trigger: CTTTGAACTTGCTGTTTTCAATATGGGCAGCACAAA...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTAATCAACTCTGCTTGTaGTTCAGAAATAGTCAGACC +
Preference number: 5 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLNQLCL*FRNSQT
Trigger: GGTCTGACTATTTCTGAACAACAAGCAGAGTTGATT...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAAATCAACTCTGCTTGTaGTTCAGAAATAGTCAGACC +
Preference number: 5 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLNQLCL*FRNSQT
Trigger: GGTCTGACTATTTCTGAACAACAAGCAGAGTTGATT...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp GAATGGTCCCAAGAAGTCTTCCTGACTAAAACGGAATCTGATTCAAAAGGTAGGATCAACATCAATGCTTaGAAGAATCAACTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: EWSQEVFLTKTESDSKGRININA*KNQLCL
Trigger: CAAGCAGAGTTGATTCTTCAAAGCATTGATGTTGAT...CCTACCTTTTGAATCAGATTCCGTTTTAGTCAGGAAGACTTCTTGGGACCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp ATAACAGTTGTTGGCCCTCATAGTAACCTAATCACTTTCCCTCTTTGGATAAGAAATCACTTTCCCTCTTaGGATAAGAGAATGCCAGTG +
Preference number: 5 (lower is better)
Translates to: ITVVGPHSNLITFPLWIRNHFPS*DKRMPV
Trigger: CACTGGCATTCTCTTATCCAAAGAGGGAAAGTGATT...TCTTATCCAAAGAGGGAAAGTGATTAGGTTACTATGAGGGCCAACAACTGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAATCATTTTGTCTGATTTaGAACCGTGAACCTGCATCA +
Preference number: 5 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVESFCLI*NREPAS
Trigger: TGATGCAGGTTCACGGTTCAAAATCAGACAAAATGA...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
CDS-3UTR CAA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAGTCTCAGGAGCAATTTaGATGACGTTTGTACCATTT +
Preference number: 5 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVEVSGAI*MTFVPF
Trigger: AAATGGTACAAACGTCATCAAAATTGCTCCTGAGAC...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAATCAGTAAGTAACTTCTaGTACTGTTCATATGCCCAG +
Preference number: 5 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVESVSNF*YCSYAQ
Trigger: CTGGGCATATGAACAGTACAAGAAGTTACTTACTGA...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCCTGGTATTCCTTCTTaGGAAATAATTCGTCGAAAG +
Preference number: 5 (lower is better)
Translates to: RTKENKDALQKLIQVKGFPGIPS*EIIRRK
Trigger: CTTTCGACGAATTATTTCCAAAGAAGGAATACCAGG...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAACCTGGTATTCCTTCTTaGGAAATAATTCGTCGAAAG +
Preference number: 5 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVEPGIPS*EIIRRK
Trigger: CTTTCGACGAATTATTTCCAAAGAAGGAATACCAGG...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATTCACTCCAGAGATTGTaGAAAGTTTCAATTATCAGG +
Preference number: 5 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNSLQRL*KVSIIR
Trigger: CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGA...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATTCTTTTGCCATAGACTaGTTTCAATTCGAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNSFAID*FQFEEK
Trigger: TTTCTCCTCGAATTGAAACAAGTCTATGGCAAAAGA...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAATTTGTGCTGCCCATATaGAAAACAGCAAGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVEFVLPI*KTASSK
Trigger: CTTTGAACTTGCTGTTTTCAATATGGGCAGCACAAA...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTAAGAATCAACTCTGCTaGTTGTTCAGAAATAGTCAG +
Preference number: 5 (lower is better)
Translates to: KDFVSCCFSKQWQDKRNLKNQLC*LFRNSQ
Trigger: CTGACTATTTCTGAACAACAAGCAGAGTTGATTCTT...AAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATAAGAATCAACTCTGCTaGTTGTTCAGAAATAGTCAG +
Preference number: 5 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNKNQLC*LFRNSQ
Trigger: CTGACTATTTCTGAACAACAAGCAGAGTTGATTCTT...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGCAGGATTAAAGAATCAACTCTGCTaGTTGTTCAGAAATAGTCAG +
Preference number: 5 (lower is better)
Translates to: FKPVHFQISDSGQRFAGLKNQLC*LFRNSQ
Trigger: CTGACTATTTCTGAACAACAAGCAGAGTTGATTCTT...TAATCCTGCAAATCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TCAAAGGATTTCGTTTCCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATATCAACATCAATGCTTaGAAGAATCAACTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SKDFVSCCFSKQWQDKRNININA*KNQLCL
Trigger: CAAGCAGAGTTGATTCTTCAAAGCATTGATGTTGAT...ATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGGAAACGAAATCCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGAAAGGCCAAAATGTTaGGAAAGACTACATGGAGCC +
Preference number: 5 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQERPKC*ERLHGA
Trigger: GGCTCCATGTAGTCTTTCCAAACATTTTGGCCTTTC...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CAA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGAAGCTTCCCATCTTTGTaGACATCTCCAGTAGTAAAA +
Preference number: 5 (lower is better)
Translates to: KQILFKPVHFQISDSGQRSFPSL*TSPVVK
Trigger: TTTTACTACTGGAGATGTCAACAAAGATGGGAAGCT...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATCATTTTGTCTGATTTaGAACCGTGAACCTGCATCA +
Preference number: 5 (lower is better)
Translates to: KQILFKPVHFQISDSGQRSFCLI*NREPAS
Trigger: TGATGCAGGTTCACGGTTCAAAATCAGACAAAATGA...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
CDS-3UTR CAA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTTCATTTTGTCTGATTTaGAACCGTGAACCTGCATCA +
Preference number: 5 (lower is better)
Translates to: KGKQRCSAEADTSQRISFSFCLI*NREPAS
Trigger: TGATGCAGGTTCACGGTTCAAAATCAGACAAAATGA...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
CDS-3UTR CAA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGAGTCTCAGGAGCAATTTaGATGACGTTTGTACCATTT +
Preference number: 5 (lower is better)
Translates to: KQILFKPVHFQISDSGQRVSGAI*MTFVPF
Trigger: AAATGGTACAAACGTCATCAAAATTGCTCCTGAGAC...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTTCAGTAAGTAACTTCTaGTACTGTTCATATGCCCAG +
Preference number: 5 (lower is better)
Translates to: KGKQRCSAEADTSQRISFSVSNF*YCSYAQ
Trigger: CTGGGCATATGAACAGTACAAGAAGTTACTTACTGA...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCTCACTCCAGAGATTGTaGAAAGTTTCAATTATCAGG +
Preference number: 5 (lower is better)
Translates to: PAAFQSNGRINGIFQINCSLQRL*KVSIIR
Trigger: CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGA...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTTCACTCCAGAGATTGTaGAAAGTTTCAATTATCAGG +
Preference number: 5 (lower is better)
Translates to: RTKENKDALQKLIQVKGFSLQRL*KVSIIR
Trigger: CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGA...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TGCCATAGACTTGTTTCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAATCTTTTGCCATAGACTaGTTTCAATTCGAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: CHRLVSIRGEKVTPEIVESFAID*FQFEEK
Trigger: TTTCTCCTCGAATTGAAACAAGTCTATGGCAAAAGA...TTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGAAACAAGTCTATGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CCTGCTGCTTTTCAAAGCAATGGCAGGATAAACGGAATCTTTCAAATAAATTGCAAACCCTATACTTATTaGGATGCTTTTGCTGTAAGG +
Preference number: 5 (lower is better)
Translates to: PAAFQSNGRINGIFQINCKPYTY*DAFAVR
Trigger: CCTTACAGCAAAAGCATCCAAATAAGTATAGGGTTT...GCAATTTATTTGAAAGATTCCGTTTATCCTGCCATTGCTTTGAAAAGCAGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATTTGTGCTGCCCATATaGAAAACAGCAAGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: KQILFKPVHFQISDSGQRFVLPI*KTASSK
Trigger: CTTTGAACTTGCTGTTTTCAATATGGGCAGCACAAA...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGAATCAACTCTGCTTGTaGTTCAGAAATAGTCAGACC +
Preference number: 5 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRNQLCL*FRNSQT
Trigger: GGTCTGACTATTTCTGAACAACAAGCAGAGTTGATT...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AGGACAAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTTGGATAGTATTGGAGTaGAAATGCAGAATTTCTCTG +
Preference number: 5 (lower is better)
Translates to: RTKENKDALQKLIQVKGFWIVLE*KCRISL
Trigger: CAGAGAAATTCTGCATTTCAACTCCAATACTATCCA...AAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTTGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CAA 90 bp AGTGTCCACAACACTCATTTTATCTGGACAAATACCAGTAGACTTTCGTATTATCACTCCAAAGAGCTTTaGTATATTGTAGGGACCATG +
Preference number: 5 (lower is better)
Translates to: SVHNTHFIWTNTSRLSYYHSKEL*YIVGTM
Trigger: CATGGTCCCTACAATATACAAAAGCTCTTTGGAGTG...ATAATACGAAAGTCTACTGGTATTTGTCCAGATAAAATGAGTGTTGTGGACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS-3UTR CAA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGCCTGGTATTCCTTCTTaGGAAATAATTCGTCGAAAG +
Preference number: 5 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQPGIPS*EIIRRK
Trigger: CTTTCGACGAATTATTTCCAAAGAAGGAATACCAGG...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGTCACTCCAGAGATTGTaGAAAGTTTCAATTATCAGG +
Preference number: 5 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRSLQRL*KVSIIR
Trigger: CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGA...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATCACTCCAGAGATTGTaGAAAGTTTCAATTATCAGG +
Preference number: 5 (lower is better)
Translates to: KQILFKPVHFQISDSGQRSLQRL*KVSIIR
Trigger: CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGA...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTTCTTTTGCCATAGACTaGTTTCAATTCGAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: KGKQRCSAEADTSQRISFSFAID*FQFEEK
Trigger: TTTCTCCTCGAATTGAAACAAGTCTATGGCAAAAGA...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGATCTTTTGCCATAGACTaGTTTCAATTCGAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: KQILFKPVHFQISDSGQRSFAID*FQFEEK
Trigger: TTTCTCCTCGAATTGAAACAAGTCTATGGCAAAAGA...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTAAACCCTATACTTATTaGGATGCTTTTGCTGTAAGG +
Preference number: 5 (lower is better)
Translates to: KGKQRCSAEADTSQRISFKPYTY*DAFAVR
Trigger: CCTTACAGCAAAAGCATCCAAATAAGTATAGGGTTT...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AAACAAATTTTGTTCAAGCCAGTACATTTTCAGATTTCGGATTCAGGGCAGAGAAAACCCTATACTTATTaGGATGCTTTTGCTGTAAGG +
Preference number: 5 (lower is better)
Translates to: KQILFKPVHFQISDSGQRKPYTY*DAFAVR
Trigger: CCTTACAGCAAAAGCATCCAAATAAGTATAGGGTTT...TCTCTGCCCTGAATCCGAAATCTGAAAATGTACTGGCTTGAACAAAATTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGAAACCCTATACTTATTaGGATGCTTTTGCTGTAAGG +
Preference number: 5 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRKPYTY*DAFAVR
Trigger: CCTTACAGCAAAAGCATCCAAATAAGTATAGGGTTT...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGAATCAACTCTGCTTGTaGTTCAGAAATAGTCAGACC +
Preference number: 5 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQNQLCL*FRNSQT
Trigger: GGTCTGACTATTTCTGAACAACAAGCAGAGTTGATT...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp AAAGGAAAACAAAGATGCTCTGCAGAAGCTGATACAAGTCAAAGGATTTCGTTTAAGAATCAACTCTGCTaGTTGTTCAGAAATAGTCAG +
Preference number: 5 (lower is better)
Translates to: KGKQRCSAEADTSQRISFKNQLC*LFRNSQ
Trigger: CTGACTATTTCTGAACAACAAGCAGAGTTGATTCTT...AAACGAAATCCTTTGACTTGTATCAGCTTCTGCAGAGCATCTTTGTTTTCCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGATCAACATCAATGCTTaGAAGAATCAACTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRININA*KNQLCL
Trigger: CAAGCAGAGTTGATTCTTCAAAGCATTGATGTTGAT...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp CAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGGTGGATAGTATTGGAGTaGAAATGCAGAATTTCTCTG +
Preference number: 5 (lower is better)
Translates to: QFEEKKSLQRLLKVSIIRWIVLE*KCRISL
Trigger: CAGAGAAATTCTGCATTTCAACTCCAATACTATCCA...CCTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565488.6
ENST00000640416.2
CDS-3UTR CAA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGTCTTTTGCCATAGACTaGTTTCAATTCGAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQSFAID*FQFEEK
Trigger: TTTCTCCTCGAATTGAAACAAGTCTATGGCAAAAGA...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS-3UTR CAA 90 bp TCAATTCGAGGAGAAAAAGTCACTCCAGAGATTGTTGAAAGTTTCAATTATCAGAAACCCTATACTTATTaGGATGCTTTTGCTGTAAGG +
Preference number: 5 (lower is better)
Translates to: SIRGEKVTPEIVESFNYQKPYTY*DAFAVR
Trigger: CCTTACAGCAAAAGCATCCAAATAAGTATAGGGTTT...CTGATAATTGAAACTTTCAACAATCTCTGGAGTGACTTTTTCTCCTCGAATTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000639606.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS GCA 72 bp GCGGCCTGGCCGAGGAAGTCACGGGAGATCGAGGGCTaGGGGGCGAGACCGGGACCAGCGCGAGGCCGGGCT +
Preference number: 6 (lower is better)
Translates to: AAWPRKSREIEG*GARPGPARGRA
Trigger: AGCCCGGCCTCGCGCTGGTCCCGGTCTCGCCCCGCAGCCCTCGATCTCCCGTGACTTCCTCGGCCAGGCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000569674.1
ENST00000639606.1
ENST00000640018.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS TCA 72 bp CGGCACTGGCCGGGCCCGCCTCCAGAGAGCCGGAAGTaGGGGAGCTGGGAGCTGGGTCTCGGGAGGTGCTGT +
Preference number: 6 (lower is better)
Translates to: RHWPGPPPESRK*GSWELGLGRCC
Trigger: ACAGCACCTCCCGAGACCCAGCTCCCAGCTCCCTCACTTCCGGCTCTCTGGAGGCGGGCCCGGCCAGTGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS CAA 90 bp GGTCTCGGGAGGTGCTGTGCGGACCCGGGGTCGACCTCTGCCCAGTaGCCAGTCCCGCTGTCAGCATGCGGGTCCGAGGAAGAGGCCCCC +
Preference number: 6 (lower is better)
Translates to: GLGRCCADPGSTSAQ*PVPLSACGSEEEAP
Trigger: GGGGGCCTCTTCCTCGGACCCGCATGCTGACAGCGGGACTGGCAACTGGGCAGAGGTCGACCCCGGGTCCGCACAGCACCTCCCGAGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS CCA 72 bp AGCCAGCGCAACATGGTCCCAGAGGCGCAGGCGGCCTaGCCGAGGAAGTCACGGGAGATCGAGGGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: SQRNMVPEAQAA*PRKSREIEGCG
Trigger: CCCGCAGCCCTCGATCTCCCGTGACTTCCTCGGCCAGGCCGCCTGCGCCTCTGGGACCATGTTGCGCTGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000569674.1
ENST00000639606.1
ENST00000640018.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS CCA 72 bp CGGTGGGCAGCACGAAGTCCCGCAGCCAGCGCAACATaGTCCCAGAGGCGCAGGCGGCCTGGCCGAGGAAGT +
Preference number: 6 (lower is better)
Translates to: RWAARSPAASAT*SQRRRRPGRGS
Trigger: ACTTCCTCGGCCAGGCCGCCTGCGCCTCTGGGACCATGTTGCGCTGGCTGCGGGACTTCGTGCTGCCCACCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264128.13
ENST00000565488.6
ENST00000569674.1
ENST00000639606.1
ENST00000640018.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS TCA 72 bp GTCCATCGAGGATGTCTCCCTCGCAGCTCCGCGGCCTaGGTGAGCCCCAGCGGGGTGGAAGTGCGACCGACG +
Preference number: 6 (lower is better)
Translates to: VHRGCLPRSSAA*VSPSGVEVRPT
Trigger: CGTCGGTCGCACTTCCACCCCGCTGGGGCTCACTCAGGCCGCGGAGCTGCGAGGGAGACATCCTCGATGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS GCA 72 bp GGTGCTGTGCGGACCCGGGGTCGACCTCTGCCCAGTTaGCAGTCCCGCTGTCAGCATGCGGGTCCGAGGAAG +
Preference number: 6 (lower is better)
Translates to: GAVRTRGRPLPS*QSRCQHAGPRK
Trigger: CTTCCTCGGACCCGCATGCTGACAGCGGGACTGGCAACTGGGCAGAGGTCGACCCCGGGTCCGCACAGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS GCA 72 bp TCTCGGGAGGTGCTGTGCGGACCCGGGGTCGACCTCTaGCCAGTTGCCAGTCCCGCTGTCAGCATGCGGGTC +
Preference number: 6 (lower is better)
Translates to: SREVLCGPGVDL*PVASPAVSMRV
Trigger: GACCCGCATGCTGACAGCGGGACTGGCAACTGGGCAGAGGTCGACCCCGGGTCCGCACAGCACCTCCCGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS GCA 72 bp GTGAGGGAGCTGGGAGCTGGGTCTCGGGAGGTGCTGTaGGGACCCGGGGTCGACCTCTGCCCAGTTGCCAGT +
Preference number: 6 (lower is better)
Translates to: VRELGAGSREVL*GPGVDLCPVAS
Trigger: ACTGGCAACTGGGCAGAGGTCGACCCCGGGTCCGCACAGCACCTCCCGAGACCCAGCTCCCAGCTCCCTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS GCA 72 bp TCGACCTCTGCCCAGTTGCCAGTCCCGCTGTCAGCATaGGGGTCCGAGGAAGAGGCCCCCAGCAGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: STSAQLPVPLSA*GSEEEAPSRSR
Trigger: CCTGGACCTGCTGGGGGCCTCTTCCTCGGACCCGCATGCTGACAGCGGGACTGGCAACTGGGCAGAGGTCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS CAA 72 bp AGGTGCTGTGCGGACCCGGGGTCGACCTCTGCCCAGTaGCCAGTCCCGCTGTCAGCATGCGGGTCCGAGGAA +
Preference number: 6 (lower is better)
Translates to: RCCADPGSTSAQ*PVPLSACGSEE
Trigger: TTCCTCGGACCCGCATGCTGACAGCGGGACTGGCAACTGGGCAGAGGTCGACCCCGGGTCCGCACAGCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS CCA 72 bp CCCAGCAGGTCCAGGGCTGCAGCGTCAGCGCGTCGGTaGCTTGGGAGCGGGGTCTTGAAGACTGGTTACTCC +
Preference number: 6 (lower is better)
Translates to: PSRSRAAASARR*LGSGVLKTGYS
Trigger: GGAGTAACCAGTCTTCAAGACCCCGCTCCCAAGCCACCGACGCGCTGACGCTGCAGCCCTGGACCTGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS GCA 72 bp CAGCGGGGTGGAAGTGCGACCGACGAACGGGATCTCTaGCCACCACACACGTCCAGTGGGAAGAGGCCTAAG +
Preference number: 6 (lower is better)
Translates to: QRGGSATDERDL*PPHTSSGKRPK
Trigger: CTTAGGCCTCTTCCCACTGGACGTGTGTGGTGGGCAGAGATCCCGTTCGTCGGTCGCACTTCCACCCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370041.4
ENST00000639032.1
CDS GCA 72 bp CGGAGCCTTGGCGGTCAGCCCAGAGCTGCTTCTCTCTaGCTGGAAACTGGGCCATGGAGGGCATTGTCTCTC +
Preference number: 6 (lower is better)
Translates to: RSLGGQPRAASL*LETGPWRALSL
Trigger: GAGAGACAATGCCCTCCATGGCCCAGTTTCCAGGCAGAGAGAAGCAGCTCTGGGCTGACCGCCAAGGCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS CCA 72 bp AGCGCGTCGGTGGCTTGGGAGCGGGGTCTTGAAGACTaGTTACTCCACTTAAAGACCCTCTCGGGCCGGAGC +
Preference number: 6 (lower is better)
Translates to: SASVAWERGLED*LLHLKTLSGRS
Trigger: GCTCCGGCCCGAGAGGGTCTTTAAGTGGAGTAACCAGTCTTCAAGACCCCGCTCCCAAGCCACCGACGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS CCA 72 bp CAGGTCCAGGGCTGCAGCGTCAGCGCGTCGGTGGCTTaGGAGCGGGGTCTTGAAGACTGGTTACTCCACTTA +
Preference number: 6 (lower is better)
Translates to: QVQGCSVSASVA*ERGLEDWLLHL
Trigger: TAAGTGGAGTAACCAGTCTTCAAGACCCCGCTCCCAAGCCACCGACGCGCTGACGCTGCAGCCCTGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS TCA 72 bp CAGCGTCAGCGCGTCGGTGGCTTGGGAGCGGGGTCTTaGAGACTGGTTACTCCACTTAAAGACCCTCTCGGG +
Preference number: 6 (lower is better)
Translates to: QRQRVGGLGAGS*RLVTPLKDPLG
Trigger: CCCGAGAGGGTCTTTAAGTGGAGTAACCAGTCTTCAAGACCCCGCTCCCAAGCCACCGACGCGCTGACGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569674.1
ENST00000640018.1
CDS CAA 72 bp CCCATCAACATCAATGCTTTGAAGAATCAACTCTGCTaGTTGTTCAGAAATAGTCAGACCCAGTGTCTGGAG +
Preference number: 6 (lower is better)
Translates to: PININALKNQLC*LFRNSQTQCLE
Trigger: CTCCAGACACTGGGTCTGACTATTTCTGAACAACAAGCAGAGTTGATTCTTCAAAGCATTGATGTTGATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS CAA 90 bp CATTGTCCCATCAACATCAATGCTTTGAAGAATCAACTCTGCTTGTaGTTCAGAAATAGTCAGACCCAGTGTCTGGAGAGACTGGACAAT +
Preference number: 6 (lower is better)
Translates to: HCPININALKNQLCL*FRNSQTQCLERLDN
Trigger: ATTGTCCAGTCTCTCCAGACACTGGGTCTGACTATTTCTGAACAACAAGCAGAGTTGATTCTTCAAAGCATTGATGTTGATGGGACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS GCA 72 bp TGTCCCATCAACATCAATGCTTTGAAGAATCAACTCTaGTTGTTGTTCAGAAATAGTCAGACCCAGTGTCTG +
Preference number: 6 (lower is better)
Translates to: CPININALKNQL*LLFRNSQTQCL
Trigger: CAGACACTGGGTCTGACTATTTCTGAACAACAAGCAGAGTTGATTCTTCAAAGCATTGATGTTGATGGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1
CDS CCA 72 bp TCTGCTTGTTGTTCAGAAATAGTCAGACCCAGTGTCTaGAGAGACTGGACAATTTCTGAAGCCTCAATTTTT +
Preference number: 6 (lower is better)
Translates to: SACCSEIVRPSV*RDWTISEASIF
Trigger: AAAAATTGAGGCTTCAGAAATTGTCCAGTCTCTCCAGACACTGGGTCTGACTATTTCTGAACAACAAGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370041.4
ENST00000565488.6
ENST00000639032.1
ENST00000640416.2
ENST00000648874.1
ENST00000649955.1