RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC25A23 (Homo sapiens)

Ensembl gene IDs: ENSG00000125648

Ensembl transcript IDs: ENST00000264088.8, ENST00000301454.9, ENST00000334510.9, ENST00000595267.1, ENST00000595810.5, ENST00000597039.1, ENST00000597307.1, ENST00000598704.5, ENST00000598908.5, ENST00000600682.5, ENST00000601322.5, ENST00000601760.1

Found 365 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGGGAATCTGGGATCCAGTGCCTGGGGGTGGAAGGCGTAGTGCTTaGAATGCAGGGATCTGGCAGTCAGCAGAAGGATCTGAGACCCAG +
Preference number: 1 (lower is better)
Translates to: LGIWDPVPGGGRRSA*NAGIWQSAEGSETQ
Trigger: CTGGGTCTCAGATCCTTCTGCTGACTGCCAGATCCCTGCATTTCAAGCACTACGCCTTCCACCCCCAGGCACTGGATCCCAGATTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR CCA 90 bp GGAGGCAGGGTCTGGGTGTTGAGGTACAGGGAATCCGTGCTCCTGTaGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAG +
Preference number: 1 (lower is better)
Translates to: GGRVWVLRYRESVLL*LGCWDPFTDLCGIQ
Trigger: CTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCTCAACACCCAGACCCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR CCA 90 bp ATCCAGAATCCAGCAGCTGAGCTTGGAGATCCAGGGCTCGAGGCATaGGGATCTGGGGTTGGGGATCTAGGATCCAGCGTTTCACTAGGA +
Preference number: 1 (lower is better)
Translates to: IQNPAAELGDPGLEA*GSGVGDLGSSVSLG
Trigger: TCCTAGTGAAACGCTGGATCCTAGATCCCCAACCCCAGATCCCCATGCCTCGAGCCCTGGATCTCCAAGCTCAGCTGCTGGATTCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR TCA 90 bp TGGGGGCCCCAGGATCCAGGCATTGTGGTTGTCAGGATCCAGTGGTaGGGTTTGTTGACATCCAGAATCCAGCAGCTGAGCTTGGAGATC +
Preference number: 1 (lower is better)
Translates to: WGPQDPGIVVVRIQW*GLLTSRIQQLSLEI
Trigger: GATCTCCAAGCTCAGCTGCTGGATTCTGGATGTCAACAAACCTCACCACTGGATCCTGACAACCACAATGCCTGGATCCTGGGGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR CCA 90 bp TGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTaGTTAAGACGTAGAGGTCCAGGATCCAGTAGGGGGCACAGGGAA +
Preference number: 1 (lower is better)
Translates to: WLGCWDPFTDLCGIQ*LRRRGPGSSRGHRE
Trigger: TTCCCTGTGCCCCCTACTGGATCCTGGACCTCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
3UTR CCA 90 bp TGGGTGTTGAGGTACAGGGAATCCGTGCTCCTGTGGTTGGGGTGTTaGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGT +
Preference number: 1 (lower is better)
Translates to: WVLRYRESVLLWLGC*DPFTDLCGIQWLRR
Trigger: ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCTCAACACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR TCA 90 bp TGGATAATCTTGAATCTTGTGGTTAGGGTAGCAGACTTGAGTTGCTaGAGTAAGGGATCCACAGTTATGGTTACAGGGGGATCTGGGATC +
Preference number: 1 (lower is better)
Translates to: WIILNLVVRVADLSC*SKGSTVMVTGGSGI
Trigger: GATCCCAGATCCCCCTGTAACCATAACTGTGGATCCCTTACTTCAGCAACTCAAGTCTGCTACCCTAACCACAAGATTCAAGATTATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
3UTR CCA 90 bp TTGGACTATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTaGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTA +
Preference number: 1 (lower is better)
Translates to: LDYPGNSTDRIAVRC*PGQQDPLPSSVTWL
Trigger: TAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATAGTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
3UTR-3UTR CCA 90 bp GGGGGCCCCAGGATCCAGGCATTGTGGTTGTCAGGATCCAGTGGTGAGGTTTGTCTAGGACACTGGATCTaGTGCCTGAGGGAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: GGPRIQALWLSGSSGEVCLGHWI*CLREAG
Trigger: CCCTGCCTCCCTCAGGCACCAGATCCAGTGTCCTAG...ACAAACCTCACCACTGGATCCTGACAACCACAATGCCTGGATCCTGGGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR CAA 90 bp GGCAGGGTCTGGGTGTTGAGGTACAGGGAATCCGTGCTCCTGTGGTaGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGG +
Preference number: 2 (lower is better)
Translates to: GRVWVLRYRESVLLW*GCWDPFTDLCGIQW
Trigger: CCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCTCAACACCCAGACCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR-3UTR CCA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATCCAGGATCTGGGTACTaGGATCTCGTGGCCAAAGAG +
Preference number: 2 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDPGSGY*DLVAKE
Trigger: CTCTTTGGCCACGAGATCCCAGTACCCAGATCCTGG...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
3UTR-3UTR CCA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATCCAGGATCTGGATGCTaGGATCCCATGACCCAATGG +
Preference number: 2 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDPGSGC*DPMTQW
Trigger: CCATTGGGTCATGGGATCCCAGCATCCAGATCCTGG...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
3UTR-3UTR CCA 90 bp AGGTTTGTTGACATCCAGAATCCAGCAGCTGAGCTTGGAGATCCAGGGCTCGAGCCAGGATCTGGGTACTaGGATCTCGTGGCCAAAGAG +
Preference number: 2 (lower is better)
Translates to: RFVDIQNPAAELGDPGLEPGSGY*DLVAKE
Trigger: CTCTTTGGCCACGAGATCCCAGTACCCAGATCCTGG...CTCGAGCCCTGGATCTCCAAGCTCAGCTGCTGGATTCTGGATGTCAACAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR-3UTR CCA 90 bp TGGGTGTTGAGGTACAGGGAATCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCAAGGGATCCACAGTTATaGTTACAGGGGGATCTGGGA +
Preference number: 2 (lower is better)
Translates to: WVLRYRESVLLWLGCWDPRDPQL*LQGDLG
Trigger: TCCCAGATCCCCCTGTAACCATAACTGTGGATCCCT...TGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCTCAACACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR-3UTR CCA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATAGAGTAGGGATCCTGTaGTTGGATCATCAGTCTCCA +
Preference number: 2 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDRVGIL*LDHQSP
Trigger: TGGAGACTGATGATCCAACCACAGGATCCCTACTCT...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
3UTR-3UTR CCA 90 bp AGGTTTGTTGACATCCAGAATCCAGCAGCTGAGCTTGGAGATCCAGGGCTCGAGGGTACTGGGATCTCGTaGCCAAAGAGTAGGGATCCT +
Preference number: 2 (lower is better)
Translates to: RFVDIQNPAAELGDPGLEGTGIS*PKSRDP
Trigger: AGGATCCCTACTCTTTGGCCACGAGATCCCAGTACC...CTCGAGCCCTGGATCTCCAAGCTCAGCTGCTGGATTCTGGATGTCAACAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR CAA 90 bp GAATCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTaGTGTGGGATCCAGTGGTTAAGACGTAGAGGTCCAGGATCCAGT +
Preference number: 2 (lower is better)
Translates to: ESVLLWLGCWDPFTD*CGIQWLRRRGPGSS
Trigger: ACTGGATCCTGGACCTCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR-3UTR TCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATAGGCTGCTCATGGCATaGCCACCGGCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDRLLMA*PPAVIP
Trigger: TGGGATTACAGCCGGTGGTCATGCCATGAGCAGCCT...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000598704.5
3UTR-3UTR CCA 90 bp GGGGGCCCCAGGATCCAGGCATTGTGGTTGTCAGGATCCAGTGGTGAGGTTTGTTTAAGGGCTGGGGTGTaGATAATCTTGAATCTTGTG +
Preference number: 2 (lower is better)
Translates to: GGPRIQALWLSGSSGEVCLRAGV*IILNLV
Trigger: CACAAGATTCAAGATTATCCACACCCCAGCCCTTAA...ACAAACCTCACCACTGGATCCTGACAACCACAATGCCTGGATCCTGGGGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR-3UTR CCA 90 bp TCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCAGAGTAGGGATCCTGTaGTTGGATCATCAGTCTCCA +
Preference number: 2 (lower is better)
Translates to: SVLLWLGCWDPFTDLCGIRVGIL*LDHQSP
Trigger: TGGAGACTGATGATCCAACCACAGGATCCCTACTCT...GATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
3UTR-3UTR CCA 90 bp AGGTTTGTTGACATCCAGAATCCAGCAGCTGAGCTTGGAGATCCAGGGCTCGAGTTGTGTGGGATCCAGTaGTTAAGACGTAGAGGTCCA +
Preference number: 2 (lower is better)
Translates to: RFVDIQNPAAELGDPGLELCGIQ*LRRRGP
Trigger: TGGACCTCTACGTCTTAACCACTGGATCCCACACAA...CTCGAGCCCTGGATCTCCAAGCTCAGCTGCTGGATTCTGGATGTCAACAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR-3UTR CCA 90 bp TATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGTAATCCCAGCACGTTaGGAGGCTGAAGGCTGGCGA +
Preference number: 2 (lower is better)
Translates to: YPGNSTDRIAVRCWPGQQVIPAR*EAEGWR
Trigger: TCGCCAGCCTTCAGCCTCCCAACGTGCTGGGATTAC...TTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
3UTR-3UTR TCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATCTGATAGAATTGCAGTaGGATGTTGGCCAGGACAGC +
Preference number: 2 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDLIELQ*DVGQDS
Trigger: GCTGTCCTGGCCAACATCTCACTGCAATTCTATCAG...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
3UTR-3UTR CCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGGGATCCACAGTTATaGTTACAGGGGGATCTGGGA +
Preference number: 2 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRRDPQL*LQGDLG
Trigger: TCCCAGATCCCCCTGTAACCATAACTGTGGATCCCT...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
3UTR-3UTR CCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGAATGGGGATTAAGGGCTaGGGTGTGGATAATCTTGAA +
Preference number: 2 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRMGIKG*GVDNLE
Trigger: TTCAAGATTATCCACACCCCAGCCCTTAATCCCCAT...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
3UTR-3UTR CCA 90 bp TATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAACAGTTACATGGCTATTaGCTGAGTTCCTTACCACAT +
Preference number: 2 (lower is better)
Translates to: YPGNSTDRIAVRCWPGQQQLHGY*LSSLPH
Trigger: ATGTGGTAAGGAACTCAGCCAATAGCCATGTAACTG...TTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000598704.5
3UTR CCA 72 bp TGGAGATCCAGGGCTCGAGGCATGGGGATCTGGGGTTaGGGATCTAGGATCCAGCGTTTCACTAGGACACTG +
Preference number: 3 (lower is better)
Translates to: WRSRARGMGIWG*GSRIQRFTRTL
Trigger: CAGTGTCCTAGTGAAACGCTGGATCCTAGATCCCCAACCCCAGATCCCCATGCCTCGAGCCCTGGATCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR TCA 72 bp TGGGATCCAGTGCCTGGGGGTGGAAGGCGTAGTGCTTaGAATGCAGGGATCTGGCAGTCAGCAGAAGGATCT +
Preference number: 3 (lower is better)
Translates to: WDPVPGGGRRSA*NAGIWQSAEGS
Trigger: AGATCCTTCTGCTGACTGCCAGATCCCTGCATTTCAAGCACTACGCCTTCCACCCCCAGGCACTGGATCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR CCA 72 bp CTTGTTTTAGGAGCCAGAATCTGGTGGGTGAAGGCTTaGGAATCTGGGATCCAGTGCCTGGGGGTGGAAGGC +
Preference number: 3 (lower is better)
Translates to: LVLGARIWWVKA*ESGIQCLGVEG
Trigger: GCCTTCCACCCCCAGGCACTGGATCCCAGATTCCCAAGCCTTCACCCACCAGATTCTGGCTCCTAAAACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR-3UTR CAA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATGTAGGGATCCTGTGGTaGGATCATCAGTCTCCAGTG +
Preference number: 3 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDVGILW*DHQSPV
Trigger: CACTGGAGACTGATGATCCAACCACAGGATCCCTAC...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
3UTR-3UTR CAA 90 bp AGGTTTGTTGACATCCAGAATCCAGCAGCTGAGCTTGGAGATCCAGGGCTCGAGTCCGTGCTCCTGTGGTaGGGGTGTTGGGATCCATTC +
Preference number: 3 (lower is better)
Translates to: RFVDIQNPAAELGDPGLESVLLW*GCWDPF
Trigger: GAATGGATCCCAACACCCCAACCACAGGAGCACGGA...CTCGAGCCCTGGATCTCCAAGCTCAGCTGCTGGATTCTGGATGTCAACAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR CCA 72 bp GTACTGGGATCTCGTGGCCAAAGAGTAGGGATCCTGTaGTTGGATCATCAGTCTCCAGTGGCTGAGGTGTGG +
Preference number: 3 (lower is better)
Translates to: VLGSRGQRVGIL*LDHQSPVAEVW
Trigger: CCACACCTCAGCCACTGGAGACTGATGATCCAACCACAGGATCCCTACTCTTTGGCCACGAGATCCCAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
3UTR TCA 72 bp TACCACATGGTCCTCTCCATAAGGCTGCTCATGGCATaGCCACCGGCTGTAATCCCAGCTATTCTGGAGGCT +
Preference number: 3 (lower is better)
Translates to: YHMVLSIRLLMA*PPAVIPAILEA
Trigger: AGCCTCCAGAATAGCTGGGATTACAGCCGGTGGTCATGCCATGAGCAGCCTTATGGAGAGGACCATGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598704.5
3UTR CCA 72 bp AGGTACAGGGAATCCGTGCTCCTGTGGTTGGGGTGTTaGGATCCATTCACTGATTTGTGTGGGATCCAGTGG +
Preference number: 3 (lower is better)
Translates to: RYRESVLLWLGC*DPFTDLCGIQW
Trigger: CCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR TCA 72 bp CAGGATCCAGGCATTGTGGTTGTCAGGATCCAGTGGTaGGGTTTGTTGACATCCAGAATCCAGCAGCTGAGC +
Preference number: 3 (lower is better)
Translates to: QDPGIVVVRIQW*GLLTSRIQQLS
Trigger: GCTCAGCTGCTGGATTCTGGATGTCAACAAACCTCACCACTGGATCCTGACAACCACAATGCCTGGATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR CCA 72 bp GTCTGGGTGTTGAGGTACAGGGAATCCGTGCTCCTGTaGTTGGGGTGTTGGGATCCATTCACTGATTTGTGT +
Preference number: 3 (lower is better)
Translates to: VWVLRYRESVLL*LGCWDPFTDLC
Trigger: ACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCTCAACACCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR CCA 72 bp TGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTaGTTAAGACGTAGAGGTCCAGGATCCAGTAGGGGG +
Preference number: 3 (lower is better)
Translates to: CWDPFTDLCGIQ*LRRRGPGSSRG
Trigger: CCCCCTACTGGATCCTGGACCTCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
3UTR-3UTR CAA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGAGTAGGGATCCTGTGGTaGGATCATCAGTCTCCAGTG +
Preference number: 3 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRVGILW*DHQSPV
Trigger: CACTGGAGACTGATGATCCAACCACAGGATCCCTAC...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
3UTR-3UTR CAA 90 bp AGGTTTGTTGACATCCAGAATCCAGCAGCTGAGCTTGGAGATCCAGGGCTCGAGGGGGTGTGGATAATCTaGAATCTTGTGGTTAGGGTA +
Preference number: 3 (lower is better)
Translates to: RFVDIQNPAAELGDPGLEGVWII*NLVVRV
Trigger: TACCCTAACCACAAGATTCAAGATTATCCACACCCC...CTCGAGCCCTGGATCTCCAAGCTCAGCTGCTGGATTCTGGATGTCAACAAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR CCA 72 bp CCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATaGCTATTGGCTGAGTTCCTTACCACATGGTCCTCT +
Preference number: 3 (lower is better)
Translates to: PGQQDPLPSSVT*LLAEFLTTWSS
Trigger: AGAGGACCATGTGGTAAGGAACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000598704.5
3UTR TCA 72 bp AGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTaGGTTCCTTACCACATGGTCCTCTCCATAAGGCTG +
Preference number: 3 (lower is better)
Translates to: RSSSKLSYMAIG*VPYHMVLSIRL
Trigger: CAGCCTTATGGAGAGGACCATGTGGTAAGGAACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000598704.5
3UTR CCA 72 bp AGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTaGCTGAGTTCCTTACCACATGGTCCTCTCCATAAG +
Preference number: 3 (lower is better)
Translates to: SKILFQAQLHGY*LSSLPHGPLHK
Trigger: CTTATGGAGAGGACCATGTGGTAAGGAACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000598704.5
3UTR TCA 72 bp TTAACACAACAAACATTTATCATCTCACCCATATTCTaGGCATTAGGAACTCAGGAGCCGCTGAGCCGGCTG +
Preference number: 3 (lower is better)
Translates to: LTQQTFIISPIF*ALGTQEPLSRL
Trigger: CAGCCGGCTCAGCGGCTCCTGAGTTCCTAATGCTCAGAATATGGGTGAGATGATAAATGTTTGTTGTGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000598908.5
3UTR TCA 72 bp TTGAATCTTGTGGTTAGGGTAGCAGACTTGAGTTGCTaGAGTAAGGGATCCACAGTTATGGTTACAGGGGGA +
Preference number: 3 (lower is better)
Translates to: LNLVVRVADLSC*SKGSTVMVTGG
Trigger: TCCCCCTGTAACCATAACTGTGGATCCCTTACTTCAGCAACTCAAGTCTGCTACCCTAACCACAAGATTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR TCA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATGGCCGTGCCTGTCCGTaGCACGGCACCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDGRACP*HGTCHC
Trigger: GCAGTGGCAGGTGCCGTGTCACGGACAGGCACGGCC...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGTGCCCCCGCCCAGCCTaGCCAGCCCCTGGCGCAACT +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWCPRPA*PAPGAT
Trigger: AGTTGCGCCAGGGGCTGGCCAGGCTGGGCGGGGGCA...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGGGCCGTGCCTGTCCGTaGCACGGCACCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWGRACP*HGTCHC
Trigger: GCAGTGGCAGGTGCCGTGTCACGGACAGGCACGGCC...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp TGGGTGTTGAGGTACAGGGAATCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCAGGTCCAGAGGGGCCGTaGCTGTCCGTGACACGGCAC +
Preference number: 4 (lower is better)
Translates to: WVLRYRESVLLWLGCWDPGPEGP*LSVTRH
Trigger: GTGCCGTGTCACGGACAGGCACGGCCCCTCTGGACC...TGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCTCAACACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGGGTCCAGAGGGGCCGTaGCTGTCCGTGACACGGCAC +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWGPEGP*LSVTRH
Trigger: GTGCCGTGTCACGGACAGGCACGGCCCCTCTGGACC...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR TCA 90 bp GGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTGGCCGTGCCTGTCCGTaGCACGGCACCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GQDSKILFQAQLHGYWLSGRACP*HGTCHC
Trigger: GCAGTGGCAGGTGCCGTGTCACGGACAGGCACGGCC...ACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR TCA 90 bp TGGGTGTTGAGGTACAGGGAATCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCAGGATCTGGGATCCAGTaGTGGGGGCCCCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: WVLRYRESVLLWLGCWDPGSGIQ*WGPQDP
Trigger: TGGATCCTGGGGCCCCCATCACTGGATCCCAGATCC...TGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCTCAACACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp AGGTTTGTTGACATCCAGAATCCAGCAGCTGAGCTTGGAGATCCAGGGCTCGAGCCCTGGCGCAACTCGTaGACGTCCACGCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: RFVDIQNPAAELGDPGLEPWRNS*TSTRPS
Trigger: GGATGGCCGCGTGGACGTGCACGAGTTGCGCCAGGG...CTCGAGCCCTGGATCTCCAAGCTCAGCTGCTGGATTCTGGATGTCAACAAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp GGGGGCCCCAGGATCCAGGCATTGTGGTTGTCAGGATCCAGTGGTGAGGTTTGTGAGGATGCCTGGGTCTaGCGAGTCGTGGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: GGPRIQALWLSGSSGEVCEDAWV*RVVAVL
Trigger: CAGTACAGCCACGACTCGGCAGACCCAGGCATCCTC...ACAAACCTCACCACTGGATCCTGACAACCACAATGCCTGGATCCTGGGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGGGGGGCCACCCTCGATaGAGGCTTGTGCCTGCATGC +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWGGHPR*RLVPAC
Trigger: GCATGCAGGCACAAGCCTCCATCGAGGGTGGCCCCC...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGCCCAGCATGGACAGCTaGGGGCCACCCTCGATGGAG +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWPSMDS*GPPSME
Trigger: CTCCATCGAGGGTGGCCCCCAGCTGTCCATGCTGGG...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR TCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGTCCCTCACCTGGACGTaGCCCCCAAGGCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWSLTWT*PPRPAS
Trigger: TGAAGCAGGCCTTGGGGGTCACGTCCAGGTGAGGGA...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR TCA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATGCAGGGTCTGGGTGTTaGGGTACAGGGAATCCGTGC +
Preference number: 4 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDAGSGC*GTGNPC
Trigger: GCACGGATTCCCTGTACCTCAACACCCAGACCCTGC...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATACATGCAGTGTCTCCTaGTGCCCCAGGATGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDTCSVS*CPRMAL
Trigger: GAGGGCCATCCTGGGGCAGCAGGAGACACTGCATGT...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp TGGGTGTTGAGGTACAGGGAATCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCAAAGCGCTCCTGCACATaGAGTGTCTCCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: WVLRYRESVLLWLGCWDPKRSCT*SVSCCP
Trigger: GGGGCAGCAGGAGACACTGCATGTGCAGGAGCGCTT...TGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCTCAACACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATAAGCGCTCCTGCACATaGAGTGTCTCCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDKRSCT*SVSCCP
Trigger: GGGGCAGCAGGAGACACTGCATGTGCAGGAGCGCTT...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGCCAGGAGCACGAGGATaGCTGGGTCTGCCGAGTCGT +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWPGARG*LGLPSR
Trigger: ACGACTCGGCAGACCCAGGCATCCTCGTGCTCCTGG...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp GGGGGCCCCAGGATCCAGGCATTGTGGTTGTCAGGATCCAGTGGTGAGGTTTGTCTATCTGGCCGCAGGTaGTGGATATGGTACCGCAGG +
Preference number: 4 (lower is better)
Translates to: GGPRIQALWLSGSSGEVCLSGRR*WIWYRR
Trigger: CCTGCGGTACCATATCCAGCACCTGCGGCCAGATAG...ACAAACCTCACCACTGGATCCTGACAACCACAATGCCTGGATCCTGGGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp TCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCAGGCTTGTGCCTGCATaGGGGTCCGGACCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SVLLWLGCWDPFTDLCGIRLVPA*GSGPGP
Trigger: TGGCCCTGGTCCGGACCCGCATGCAGGCACAAGCCT...GATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGCTCGATGGAGGCTTGTaGCTGCATGCGGGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWLDGGL*LHAGPD
Trigger: GTCCGGACCCGCATGCAGGCACAAGCCTCCATCGAG...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGTTGCCAGGATCCACTTaGTGTGCCACTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWLPGST*CATGAP
Trigger: GGGGGCCCCAGTGGCACAGCAAGTGGATCCTGGCAA...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATGTCGAGCCCGCCATCTaGGTCAGCATCACCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDVEPAI*VSITLR
Trigger: TCTGAGGGTGATGCTGACCCAGATGGCGGGCTCGAC...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp GGGGGCCCCAGGATCCAGGCATTGTGGTTGTCAGGATCCAGTGGTGAGGTTTGTCCTGCTCCAGCGAGATaGAAATGCCCAGAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: GGPRIQALWLSGSSGEVCPAPAR*KCPELG
Trigger: TCCGAGCTCTGGGCATTTCCATCTCGCTGGAGCAGG...ACAAACCTCACCACTGGATCCTGACAACCACAATGCCTGGATCCTGGGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGGAGCACGAGGATGCCTaGGTCTGCCGAGTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWEHEDA*VCRVVA
Trigger: AGCCACGACTCGGCAGACCCAGGCATCCTCGTGCTC...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp AGGTTTGTTGACATCCAGAATCCAGCAGCTGAGCTTGGAGATCCAGGGCTCGAGCAGTCCGCTCGGCTCTaGCACTTGCGGGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RFVDIQNPAAELGDPGLEQSARL*HLREVV
Trigger: CACCACCTCCCGCAAGTGCCAGAGCCGAGCGGACTG...CTCGAGCCCTGGATCTCCAAGCTCAGCTGCTGGATTCTGGATGTCAACAAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATCTAGGACACTGGATCTaGTGCCTGAGGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDLGHWI*CLREAG
Trigger: CCCTGCCTCCCTCAGGCACCAGATCCAGTGTCCTAG...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp TCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCACTGGATCTGGTGCCTaGGGGAGGCAGGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SVLLWLGCWDPFTDLCGITGSGA*GRQGLG
Trigger: ACCCAGACCCTGCCTCCCTCAGGCACCAGATCCAGT...GATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGGCCACGAAGCGCTCCTaGACATGCAGTGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWATKRS*TCSVSC
Trigger: GCAGGAGACACTGCATGTGCAGGAGCGCTTCGTGGC...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGGAGGATGCCTGGGTCTaGCGAGTCGTGGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWEDAWV*RVVAVL
Trigger: CAGTACAGCCACGACTCGGCAGACCCAGGCATCCTC...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATCTATCTGGCCGCAGGTaGTGGATATGGTACCGCAGG +
Preference number: 4 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDLSGRR*WIWYRR
Trigger: CCTGCGGTACCATATCCAGCACCTGCGGCCAGATAG...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp AGGTTTGTTGACATCCAGAATCCAGCAGCTGAGCTTGGAGATCCAGGGCTCGAGAGGATCCACTTGCTGTaGCACTGGGGCCCCCGCACT +
Preference number: 4 (lower is better)
Translates to: RFVDIQNPAAELGDPGLERIHLL*HWGPRT
Trigger: AGTGCGGGGGCCCCAGTGGCACAGCAAGTGGATCCT...CTCGAGCCCTGGATCTCCAAGCTCAGCTGCTGGATTCTGGATGTCAACAAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp CCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATTGCCCCCGCCCAGCCTaGCCAGCCCCTGGCGCAACT +
Preference number: 4 (lower is better)
Translates to: PGNSTDRIAVRCWPGQQDCPRPA*PAPGAT
Trigger: AGTTGCGCCAGGGGCTGGCCAGGCTGGGCGGGGGCA...ATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CCA 90 bp TGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGGGGCCAGCGGGTAACTaGCTATCTGGCCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: WPGQQDPLPSSVTWLLAEGPAGN*LSGRRC
Trigger: GCACCTGCGGCCAGATAGCCAGTTACCCGCTGGCCC...CTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CCA 90 bp GGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTGGGCCAGCGGGTAACTaGCTATCTGGCCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GQDSKILFQAQLHGYWLSGPAGN*LSGRRC
Trigger: GCACCTGCGGCCAGATAGCCAGTTACCCGCTGGCCC...ACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CCA 90 bp GGGGGCCCCAGGATCCAGGCATTGTGGTTGTCAGGATCCAGTGGTGAGGTTTGTCCAGGATCTGGATGCTaGGATCCCATGACCCAATGG +
Preference number: 4 (lower is better)
Translates to: GGPRIQALWLSGSSGEVCPGSGC*DPMTQW
Trigger: CCATTGGGTCATGGGATCCCAGCATCCAGATCCTGG...ACAAACCTCACCACTGGATCCTGACAACCACAATGCCTGGATCCTGGGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp GGGGGCCCCAGGATCCAGGCATTGTGGTTGTCAGGATCCAGTGGTGAGGTTTGTGGTTACAGGGGGATCTaGGATCTAGTGGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: GGPRIQALWLSGSSGEVCGYRGI*DLVAEG
Trigger: CCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACC...ACAAACCTCACCACTGGATCCTGACAACCACAATGCCTGGATCCTGGGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp GGGGGCCCCAGGATCCAGGCATTGTGGTTGTCAGGATCCAGTGGTGAGGTTTGTATGGGGATCTGGGGTTaGGGATCTAGGATCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GGPRIQALWLSGSSGEVCMGIWG*GSRIQR
Trigger: ACGCTGGATCCTAGATCCCCAACCCCAGATCCCCAT...ACAAACCTCACCACTGGATCCTGACAACCACAATGCCTGGATCCTGGGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp TCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCCAGGGCTCGAGGCATaGGGATCTGGGGTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SVLLWLGCWDPFTDLCGIPGLEA*GSGVGD
Trigger: ATCCCCAACCCCAGATCCCCATGCCTCGAGCCCTGG...GATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp GGGGGCCCCAGGATCCAGGCATTGTGGTTGTCAGGATCCAGTGGTGAGGTTTGTCAAGACTGTGAAACATaGGCAGCAGACGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: GGPRIQALWLSGSSGEVCQDCET*AADAVP
Trigger: GGGAACAGCGTCTGCTGCTCATGTTTCACAGTCTTG...ACAAACCTCACCACTGGATCCTGACAACCACAATGCCTGGATCCTGGGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp TGGGTGTTGAGGTACAGGGAATCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCACAGCCGGTTGGTCTTTaGGGCATGGACCTGCATGAA +
Preference number: 4 (lower is better)
Translates to: WVLRYRESVLLWLGCWDPQPVGL*GMDLHE
Trigger: TTCATGCAGGTCCATGCCTCAAAGACCAACCGGCTG...TGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCTCAACACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGTCCTGGGACAGGATGTaGCGTAGCAGACCCAGCATG +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWSWDRM*RSRPSM
Trigger: CATGCTGGGTCTGCTACGTCACATCCTGTCCCAGGA...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp TGGGTGTTGAGGTACAGGGAATCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCACCCGTCAGCTTCTCTTaGTTTGAGAACTCGTCCGGC +
Preference number: 4 (lower is better)
Translates to: WVLRYRESVLLWLGCWDPPVSFS*FENSSG
Trigger: GCCGGACGAGTTCTCAAAGCAAGAGAAGCTGACGGG...TGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCTCAACACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp CATAAGGCTGCTCATGGCATGACCACCGGCTGTAATCCCAGCTATTCTGGAGGCCTATCTGGCCGCAGGTaGTGGATATGGTACCGCAGG +
Preference number: 4 (lower is better)
Translates to: HKAAHGMTTGCNPSYSGGLSGRR*WIWYRR
Trigger: CCTGCGGTACCATATCCAGCACCTGCGGCCAGATAG...GCCTCCAGAATAGCTGGGATTACAGCCGGTGGTCATGCCATGAGCAGCCTTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598704.5
CDS-3UTR GCA 90 bp CCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTTCAGCCTTGTGCCTGCATaGGGGTCCGGACCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PGQQDPLPSSVTWLLAEFSLVPA*GSGPGP
Trigger: TGGCCCTGGTCCGGACCCGCATGCAGGCACAAGGCT...GAACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp CCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTTCCTCCAGCCTTGTGCCTaGATGCGGGTCCGGACCAGG +
Preference number: 4 (lower is better)
Translates to: PGQQDPLPSSVTWLLAEFLQPCA*MRVRTR
Trigger: CCTGGTCCGGACCCGCATGCAGGCACAAGGCTGGAG...GAACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATGGTACAGGGAATCCGTaGTCCTGTGGTTGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDGTGNP*SCGWGV
Trigger: AACACCCCAACCACAGGAGCACGGATTCCCTGTACC...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGGAATCTGGGATCCAGTaGCTGGGGGTGGAAGGCGTA +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWESGIQ*LGVEGV
Trigger: TACGCCTTCCACCCCCAGGCACTGGATCCCAGATTC...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATCGGCTTGTGCCTGCATaGGGGTCCGGACCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDRLVPA*GSGPGP
Trigger: TGGCCCTGGTCCGGACCCGCATGCAGGCACAAGCCG...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595810.5
CDS-3UTR CCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGAAGCCTGGCCAGCCCCTaGCGCAACTCGTGCACGTCC +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRSLASP*RNSCTS
Trigger: GGACGTGCACGAGTTGCGCCAGGGGCTGGCCAGGCT...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp TCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCTCTGGCCGCAGGTGCTaGATATGGTACCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SVLLWLGCWDPFTDLCGISGRRC*IWYRRP
Trigger: TGGCCTGCGGTACCATATCCAGCACCTGCGGCCAGA...GATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp ATGTTGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCGGGCCAGCGGGTAACTaGCTATCTGGCCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: MLARTARSSSKLSYMAIGGPAGN*LSGRRC
Trigger: GCACCTGCGGCCAGATAGCCAGTTACCCGCTGGCCC...GCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CCA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATGGTTACAGGGGGATCTaGGATCTAGTGGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDGYRGI*DLVAEG
Trigger: CCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACC...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp TCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCTGGAGTGAGGGGATCTaGGATCCAGTGATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SVLLWLGCWDPFTDLCGIWSEGI*DPVMGA
Trigger: GGCCCCCATCACTGGATCCCAGATCCCCTCACTCCA...GATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGCACTTGCTGTGCCACTaGGGCCCCCGCACTTGTTTT +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWHLLCH*GPRTCF
Trigger: AAAACAAGTGCGGGGGCCCCAGTGGCACAGCAAGTG...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp TGGGTGTTGAGGTACAGGGAATCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCCGGTCAAGACTGTaGAACATGAGCAGCAGACGC +
Preference number: 4 (lower is better)
Translates to: WVLRYRESVLLWLGCWDPFRSRL*NMSSRR
Trigger: GCGTCTGCTGCTCATGTTTCACAGTCTTGACCGGAA...TGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCTCAACACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATCAGCTTCTCTTGCTTTaGGAACTCGTCCGGCACTGT +
Preference number: 4 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDQLLLL*ELVRHC
Trigger: ACAGTGCCGGACGAGTTCTCAAAGCAAGAGAAGCTG...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp TGGGTGTTGAGGTACAGGGAATCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATCGTGGCTGTACTGCTaGAGCCACCAGTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: WVLRYRESVLLWLGCWDPSWLYC*SHQFFR
Trigger: TCTGAAGAACTGGTGGCTTCAGCAGTACAGCCACGA...TGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCTCAACACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATTCGTGGCTGTACTGCTaGAGCCACCAGTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDSWLYC*SHQFFR
Trigger: TCTGAAGAACTGGTGGCTTCAGCAGTACAGCCACGA...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp TGGGTGTTGAGGTACAGGGAATCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCACCAGCGAGATGGAAATaGCCAGAGCTCGGAAACTCT +
Preference number: 4 (lower is better)
Translates to: WVLRYRESVLLWLGCWDPPARWK*PELGNS
Trigger: AGAGTTTCCGAGCTCTGGGCATTTCCATCTCGCTGG...TGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCTCAACACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp GGGGGCCCCAGGATCCAGGCATTGTGGTTGTCAGGATCCAGTGGTGAGGTTTGTACATTTTCCAGCGAATaGAACAGGAAGTGGTCGCGC +
Preference number: 4 (lower is better)
Translates to: GGPRIQALWLSGSSGEVCTFSSE*NRKWSR
Trigger: GCGCGACCACTTCCTGTTGCATTCGCTGGAAAATGT...ACAAACCTCACCACTGGATCCTGACAACCACAATGCCTGGATCCTGGGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp TGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGAAGCGCTCCTGCACATaGAGTGTCTCCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: WPGQQDPLPSSVTWLLAEKRSCT*SVSCCP
Trigger: GGGGCAGCAGGAGACACTGCATGTGCAGGAGCGCTT...CTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp TGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGGCCACGAAGCGCTCCTaGACATGCAGTGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: WPGQQDPLPSSVTWLLAEATKRS*TCSVSC
Trigger: GCAGGAGACACTGCATGTGCAGGAGCGCTTCGTGGC...CTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp GGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTGAGGATGCCTGGGTCTaGCGAGTCGTGGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: GQDSKILFQAQLHGYWLSEDAWV*RVVAVL
Trigger: CAGTACAGCCACGACTCGGCAGACCCAGGCATCCTC...ACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR GCA 90 bp GGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTTGTACTCCAGCCTTGTaGCTGCATGCGGGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: GQDSKILFQAQLHGYWLSCTPAL*LHAGPD
Trigger: GTCCGGACCCGCATGCAGGCACAAGGCTGGAGTACA...ACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGAAGGCTTGTGCCTGCATaGGGGTCCGGACCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRRLVPA*GSGPGP
Trigger: TGGCCCTGGTCCGGACCCGCATGCAGGCACAAGCCT...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp GGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTACTGCATCTTGTGCCTaGATGCGGGTCCGGACCAGG +
Preference number: 4 (lower is better)
Translates to: GQDSKILFQAQLHGYWLSTASCA*MRVRTR
Trigger: CCTGGTCCGGACCCGCATGCAGGCACAAGATGCAGT...ACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598704.5
CDS-3UTR CCA 90 bp CCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATAGCCTGGCCAGCCCCTaGCGCAACTCGTGCACGTCC +
Preference number: 4 (lower is better)
Translates to: PGNSTDRIAVRCWPGQQDSLASP*RNSCTS
Trigger: GGACGTGCACGAGTTGCGCCAGGGGCTGGCCAGGCT...ATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CCA 90 bp GGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTTCTGGCCGCAGGTGCTaGATATGGTACCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GQDSKILFQAQLHGYWLSSGRRC*IWYRRP
Trigger: TGGCCTGCGGTACCATATCCAGCACCTGCGGCCAGA...ACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTGGGCCAGCGGGTAACTaGCTATCTGGCCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRGPAGN*LSGRRC
Trigger: GCACCTGCGGCCAGATAGCCAGTTACCCGCTGGCCC...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATGGGCCAGCGGGTAACTaGCTATCTGGCCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDGPAGN*LSGRRC
Trigger: GCACCTGCGGCCAGATAGCCAGTTACCCGCTGGCCC...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000598908.5
ENST00000601322.5
CDS-3UTR CCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGAGGGCCAGCGGGTAACTaGCTATCTGGCCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRGPAGN*LSGRRC
Trigger: GCACCTGCGGCCAGATAGCCAGTTACCCGCTGGCCC...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTGGGGGCCACCCTCGATaGAGGCTTGTGCCTGCATGC +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRGGHPR*RLVPAC
Trigger: GCATGCAGGCACAAGCCTCCATCGAGGGTGGCCCCC...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTCCCAGCATGGACAGCTaGGGGCCACCCTCGATGGAG +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRPSMDS*GPPSME
Trigger: CTCCATCGAGGGTGGCCCCCAGCTGTCCATGCTGGG...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGGAATCCGTGCTCCTGTaGTTGGGGTGTTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWESVLL*LGCWDP
Trigger: TGGATCCCAACACCCCAACCACAGGAGCACGGATTC...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp AGGTTTGTTGACATCCAGAATCCAGCAGCTGAGCTTGGAGATCCAGGGCTCGAGGAAGGCTTGGGAATCTaGGATCCAGTGCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RFVDIQNPAAELGDPGLEEGLGI*DPVPGG
Trigger: ACCCCCAGGCACTGGATCCCAGATTCCCAAGCCTTC...CTCGAGCCCTGGATCTCCAAGCTCAGCTGCTGGATTCTGGATGTCAACAAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGTGGTGGGTGAAGGCTTaGGAATCTGGGATCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWWWVKA*ESGIQC
Trigger: GCACTGGATCCCAGATTCCCAAGCCTTCACCCACCA...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATGGAGCCAGAATCTGGTaGGTGAAGGCTTGGGAATCT +
Preference number: 4 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDGARIW*VKAWES
Trigger: AGATTCCCAAGCCTTCACCCACCAGATTCTGGCTCC...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp TCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGCCGGTTGGTCTTTaGGGCATGGACCTGCATGAA +
Preference number: 4 (lower is better)
Translates to: SVLLWLGCWDPFTDLCGIQPVGL*GMDLHE
Trigger: TTCATGCAGGTCCATGCCTCAAAGACCAACCGGCTG...GATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR TCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTTCCCTCACCTGGACGTaGCCCCCAAGGCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRSLTWT*PPRPAS
Trigger: TGAAGCAGGCCTTGGGGGTCACGTCCAGGTGAGGGA...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR TCA 90 bp TGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGGGCAGGAGAATCGCTTaGACCTTGTGCCTGCATGCG +
Preference number: 4 (lower is better)
Translates to: WPGQQDPLPSSVTWLLAEGRRIA*TLCLHA
Trigger: CGCATGCAGGCACAAGGTTCAAGCGATTCTCCTGCC...CTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601322.5
CDS-3UTR GCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGGCTGTTTCCACCACATaGCCGTCAGCTTCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWAVSTT*PSASLA
Trigger: AGCAAGAGAAGCTGACGGGCATGTGGTGGAAACAGC...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGTTTGAGGCATGGACCTaGATGAAGACCTTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWFEAWT*MKTLRR
Trigger: CCGCCTCAAGGTCTTCATGCAGGTCCATGCCTCAAA...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp TGTTGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTACATGCAGTGTCTCCTaGTGCCCCAGGATGGCCCTC +
Preference number: 4 (lower is better)
Translates to: CWPGQQDPLPSSVTWLLATCSVS*CPRMAL
Trigger: GAGGGCCATCCTGGGGCAGCAGGAGACACTGCATGT...AGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGACCAGGAGCACGAGGATaGCTGGGTCTGCCGAGTCGT +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRPGARG*LGLPSR
Trigger: ACGACTCGGCAGACCCAGGCATCCTCGTGCTCCTGG...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATCCAGGAGCACGAGGATaGCTGGGTCTGCCGAGTCGT +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDPGARG*LGLPSR
Trigger: ACGACTCGGCAGACCCAGGCATCCTCGTGCTCCTGG...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000598908.5
ENST00000601322.5
CDS-3UTR GCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGAATGGAGGCTTGTGCCTaGATGCGGGTCCGGACCAGG +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRMEACA*MRVRTR
Trigger: CCTGGTCCGGACCCGCATGCAGGCACAAGCCTCCAT...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGACTCGATGGAGGCTTGTaGCTGCATGCGGGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRLDGGL*LHAGPD
Trigger: GTCCGGACCCGCATGCAGGCACAAGCCTCCATCGAG...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp GGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTCGAAACTGCATCTTGTaGCTGCATGCGGGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: GQDSKILFQAQLHGYWLSRNCIL*LHAGPD
Trigger: GTCCGGACCCGCATGCAGGCACAAGATGCAGTTTCG...ACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598704.5
CDS-3UTR GCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATATCCTTGTGCCTGCATaGGGGTCCGGACCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDILVPA*GSGPGP
Trigger: TGGCCCTGGTCCGGACCCGCATGCAGGCACAAGGAT...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598908.5
CDS-3UTR CCA 90 bp TGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGCCTGCTCCAGCGAGATaGAAATGCCCAGAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: WPGQQDPLPSSVTWLLAEPAPAR*KCPELG
Trigger: TCCGAGCTCTGGGCATTTCCATCTCGCTGGAGCAGG...CTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTGAGCACGAGGATGCCTaGGTCTGCCGAGTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRREHEDA*VCRVVA
Trigger: AGCCACGACTCGGCAGACCCAGGCATCCTCGTGCTC...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp ATGTTGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTCTGGCCGCAGGTGCTaGATATGGTACCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: MLARTARSSSKLSYMAIGSGRRC*IWYRRP
Trigger: TGGCCTGCGGTACCATATCCAGCACCTGCGGCCAGA...GCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CCA 90 bp TCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCCAGGATCTGGATGCTaGGATCCCATGACCCAATGG +
Preference number: 4 (lower is better)
Translates to: SVLLWLGCWDPFTDLCGIPGSGC*DPMTQW
Trigger: CCATTGGGTCATGGGATCCCAGCATCCAGATCCTGG...GATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp TCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCCGTGCTCCTGTGGTTaGGGTGTTGGGATCCATTCA +
Preference number: 4 (lower is better)
Translates to: SVLLWLGCWDPFTDLCGIPCSCG*GVGIHS
Trigger: TGAATGGATCCCAACACCCCAACCACAGGAGCACGG...GATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR TCA 90 bp CGTGATCAGTGTTTGAAGTATAAGAGTCTAAGATTCAGGATTCAGGTACTGGGAGGCCGTGCCTGTCCGTaGCACGGCACCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: RDQCLKYKSLRFRIQVLGGRACP*HGTCHC
Trigger: GCAGTGGCAGGTGCCGTGTCACGGACAGGCACGGCC...TCCCAGTACCTGAATCCTGAATCTTAGACTCTTATACTTCAAACACTGATCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000598908.5
CDS-3UTR TCA 90 bp TGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGCAGCCGGTTGGTCTTTaGGGCATGGACCTGCATGAA +
Preference number: 4 (lower is better)
Translates to: WPGQQDPLPSSVTWLLAEQPVGL*GMDLHE
Trigger: TTCATGCAGGTCCATGCCTCAAAGACCAACCGGCTG...CTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR TCA 90 bp CATAAGGCTGCTCATGGCATGACCACCGGCTGTAATCCCAGCTATTCTGGAGGCCTGATAGAATTGCAGTaGGATGTTGGCCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: HKAAHGMTTGCNPSYSGGLIELQ*DVGQDS
Trigger: GCTGTCCTGGCCAACATCTCACTGCAATTCTATCAG...GCCTCCAGAATAGCTGGGATTACAGCCGGTGGTCATGCCATGAGCAGCCTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598704.5
CDS-3UTR GCA 90 bp AGGTTTGTTGACATCCAGAATCCAGCAGCTGAGCTTGGAGATCCAGGGCTCGAGTTTGAGGCATGGACCTaGATGAAGACCTTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RFVDIQNPAAELGDPGLEFEAWT*MKTLRR
Trigger: CCGCCTCAAGGTCTTCATGCAGGTCCATGCCTCAAA...CTCGAGCCCTGGATCTCCAAGCTCAGCTGCTGGATTCTGGATGTCAACAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGAACATGCAGTGTCTCCTaGTGCCCCAGGATGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRTCSVS*CPRMAL
Trigger: GAGGGCCATCCTGGGGCAGCAGGAGACACTGCATGT...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATGAGGATGCCTGGGTCTaGCGAGTCGTGGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDEDAWV*RVVAVL
Trigger: CAGTACAGCCACGACTCGGCAGACCCAGGCATCCTC...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000598908.5
ENST00000601322.5
CDS-3UTR GCA 90 bp GGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATCCTCCAGGAGCACGAGGATaGCTGGGTCTGCCGAGTCGT +
Preference number: 4 (lower is better)
Translates to: GNSTDRIAVRCWPGQQDPPGARG*LGLPSR
Trigger: ACGACTCGGCAGACCCAGGCATCCTCGTGCTCCTGG...AGGATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR GCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGAGGACACTGGATCTGGTaGCTGAGGGAGGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRGHWIW*LREAGS
Trigger: AGACCCTGCCTCCCTCAGGCACCAGATCCAGTGTCC...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp GGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATCCTCATCTTGTGCCTGCATaGGGGTCCGGACCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GNSTDRIAVRCWPGQQDPHLVPA*GSGPGP
Trigger: TGGCCCTGGTCCGGACCCGCATGCAGGCACAAGATG...AGGATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598704.5
CDS-3UTR GCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATCTTGAACCTTGTGCCTaGATGCGGGTCCGGACCAGG +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDLEPCA*MRVRTR
Trigger: CCTGGTCCGGACCCGCATGCAGGCACAAGGTTCAAG...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601322.5
CDS-3UTR GCA 90 bp AATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATCCTCTTCCACCGGCTTGTGCCTaGATGCGGGTCCGGACCAGG +
Preference number: 4 (lower is better)
Translates to: NSTDRIAVRCWPGQQDPLPPACA*MRVRTR
Trigger: CCTGGTCCGGACCCGCATGCAGGCACAAGCCGGTGG...AAGAGGATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595810.5
CDS-3UTR CCA 90 bp GGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATCCTGAGGAGATACCCTGTTaGGCGCCGGGGTCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: GNSTDRIAVRCWPGQQDPEEIPC*APGSGL
Trigger: CAACCCAGACCCCGGCGCCCAACAGGGTATCTCCTC...AGGATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATGTCGAGCCCGCCATCTaGGTCAGCATCACCCTCAGA +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDVEPAI*VSITLR
Trigger: TCTGAGGGTGATGCTGACCCAGATGGCGGGCTCGAC...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CCA 90 bp TGTTGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGTGAGCCACTGCGCCTaGCCAAGACCGTGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: CWPGQQDPLPSSVTWLLAVSHCA*PRPWFL
Trigger: CAAAAACCACGGTCTTGGCCAGGCGCAGTGGCTCAC...AGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CCA 90 bp TCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCGGATGTTCAGCCGGTTaGTCTTTGAGGCATGGACCT +
Preference number: 4 (lower is better)
Translates to: SVLLWLGCWDPFTDLCGIGCSAG*SLRHGP
Trigger: AGGTCCATGCCTCAAAGACCAACCGGCTGAACATCC...GATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTTCTGGCCGCAGGTGCTaGATATGGTACCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRSGRRC*IWYRRP
Trigger: TGGCCTGCGGTACCATATCCAGCACCTGCGGCCAGA...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp TGTTGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGTAATCCCAGCACGTTaGGAGGCTGAAGGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: CWPGQQDPLPSSVTWLLAVIPAR*EAEGWR
Trigger: TCGCCAGCCTTCAGCCTCCCAACGTGCTGGGATTAC...AGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGAGGGATCCACAGTTATaGTTACAGGGGGATCTGGGA +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWRDPQL*LQGDLG
Trigger: TCCCAGATCCCCCTGTAACCATAACTGTGGATCCCT...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp TGGGTGTTGAGGTACAGGGAATCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTGTGTGGGATCCAGTaGTTAAGACGTAGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: WVLRYRESVLLWLGCWDPLCGIQ*LRRRGP
Trigger: TGGACCTCTACGTCTTAACCACTGGATCCCACACAA...TGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCTCAACACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp GGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTTTCCGGTCAAGACTGTaGAACATGAGCAGCAGACGC +
Preference number: 4 (lower is better)
Translates to: GQDSKILFQAQLHGYWLSFRSRL*NMSSRR
Trigger: GCGTCTGCTGCTCATGTTTCACAGTCTTGACCGGAA...ACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR TCA 90 bp TGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTCGTGGCTGTACTGCTaGAGCCACCAGTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: WPGQQDPLPSSVTWLLAESWLYC*SHQFFR
Trigger: TCTGAAGAACTGGTGGCTTCAGCAGTACAGCCACGA...CTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR TCA 90 bp TCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCGTCAGGATCCAGTGGTaGGGTTTGTTGACATCCAGA +
Preference number: 4 (lower is better)
Translates to: SVLLWLGCWDPFTDLCGIVRIQW*GLLTSR
Trigger: TCTGGATGTCAACAAACCTCACCACTGGATCCTGAC...GATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp CCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTTCAGGCTGCTCATGGCATaGCCACCGGCTGTAATACCA +
Preference number: 4 (lower is better)
Translates to: PGQQDPLPSSVTWLLAEFRLLMA*PPAVIP
Trigger: TGGTATTACAGCCGGTGGTCATGCCATGAGCAGCCT...GAACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601322.5
CDS-3UTR GCA 90 bp CGTGATCAGTGTTTGAAGTATAAGAGTCTAAGATTCAGGATTCAGGTACTGGGACCCTGGCGCAACTCGTaGACGTCCACGCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: RDQCLKYKSLRFRIQVLGPWRNS*TSTRPS
Trigger: GGATGGCCGCGTGGACGTGCACGAGTTGCGCCAGGG...TCCCAGTACCTGAATCCTGAATCTTAGACTCTTATACTTCAAACACTGATCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp CCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTTCCCCGTCAGCTTCTCTTaGTTTGAGAACTCGTCCGGC +
Preference number: 4 (lower is better)
Translates to: PGQQDPLPSSVTWLLAEFPVSFS*FENSSG
Trigger: GCCGGACGAGTTCTCAAAGCAAGAGAAGCTGACGGG...GAACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp GGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTGCTGTTTCCACCACATaGCCGTCAGCTTCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: GQDSKILFQAQLHGYWLSAVSTT*PSASLA
Trigger: AGCAAGAGAAGCTGACGGGCATGTGGTGGAAACAGC...ACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp CGTGATCAGTGTTTGAAGTATAAGAGTCTAAGATTCAGGATTCAGGTACTGGGAGGTCCAGAGGGGCCGTaGCTGTCCGTGACACGGCAC +
Preference number: 4 (lower is better)
Translates to: RDQCLKYKSLRFRIQVLGGPEGP*LSVTRH
Trigger: GTGCCGTGTCACGGACAGGCACGGCCCCTCTGGACC...TCCCAGTACCTGAATCCTGAATCTTAGACTCTTATACTTCAAACACTGATCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000598908.5
CDS-3UTR GCA 90 bp GGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTTTTGAGGCATGGACCTaGATGAAGACCTTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GQDSKILFQAQLHGYWLSFEAWT*MKTLRR
Trigger: CCGCCTCAAGGTCTTCATGCAGGTCCATGCCTCAAA...ACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp GGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATCCTGAGGATGCCTGGGTCTaGCGAGTCGTGGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: GNSTDRIAVRCWPGQQDPEDAWV*RVVAVL
Trigger: CAGTACAGCCACGACTCGGCAGACCCAGGCATCCTC...AGGATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR GCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATCTATCTGGCCGCAGGTaGTGGATATGGTACCGCAGG +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDLSGRR*WIWYRR
Trigger: CCTGCGGTACCATATCCAGCACCTGCGGCCAGATAG...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000598908.5
ENST00000601322.5
CDS-3UTR GCA 90 bp AGCTTGGACTATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAATGACCACCGGCTTGTaGCTGCATGCGGGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: SLDYPGNSTDRIAVRCWPMTTGL*LHAGPD
Trigger: GTCCGGACCCGCATGCAGGCACAAGCCGGTGGTCAT...TGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATAGTCCAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595810.5
CDS-3UTR CCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGTTGGTCTTTGAGGCATaGACCTGCATGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWLVFEA*TCMKTL
Trigger: CAAGGTCTTCATGCAGGTCCATGCCTCAAAGACCAA...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp TATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGAGCACGAGGATGCCTaGGTCTGCCGAGTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: YPGNSTDRIAVRCWPGQQEHEDA*VCRVVA
Trigger: AGCCACGACTCGGCAGACCCAGGCATCCTCGTGCTC...TTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CCA 90 bp AGCTTGGACTATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGAGCACGAGGATGCCTaGGTCTGCCGAGTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SLDYPGNSTDRIAVRCWPEHEDA*VCRVVA
Trigger: AGCCACGACTCGGCAGACCCAGGCATCCTCGTGCTC...TGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATAGTCCAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CCA 90 bp CCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATTCTGGCCGCAGGTGCTaGATATGGTACCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PGNSTDRIAVRCWPGQQDSGRRC*IWYRRP
Trigger: TGGCCTGCGGTACCATATCCAGCACCTGCGGCCAGA...ATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATGTAATCCCAGCACGTTaGGAGGCTGAAGGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDVIPAR*EAEGWR
Trigger: TCGCCAGCCTTCAGCCTCCCAACGTGCTGGGATTAC...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000598908.5
CDS-3UTR CCA 90 bp TCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCAGGGATCCACAGTTATaGTTACAGGGGGATCTGGGA +
Preference number: 4 (lower is better)
Translates to: SVLLWLGCWDPFTDLCGIRDPQL*LQGDLG
Trigger: TCCCAGATCCCCCTGTAACCATAACTGTGGATCCCT...GATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGCTGTGGTTGGGGTGTTaGGATCCATTCACTGATTTG +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWLWLGC*DPFTDL
Trigger: CAAATCAGTGAATGGATCCCAACACCCCAACCACAG...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp AGGTTTGTTGACATCCAGAATCCAGCAGCTGAGCTTGGAGATCCAGGGCTCGAGAGGATCCAGGCATTGTaGTTGTCAGGATCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RFVDIQNPAAELGDPGLERIQAL*LSGSSG
Trigger: ACCACTGGATCCTGACAACCACAATGCCTGGATCCT...CTCGAGCCCTGGATCTCCAAGCTCAGCTGCTGGATTCTGGATGTCAACAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp TGTTGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTCAAGACTGTGAAACATaGGCAGCAGACGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: CWPGQQDPLPSSVTWLLAQDCET*AADAVP
Trigger: GGGAACAGCGTCTGCTGCTCATGTTTCACAGTCTTG...AGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR TCA 90 bp TGTTGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTCAGCTTCTCTTGCTTTaGGAACTCGTCCGGCACTGT +
Preference number: 4 (lower is better)
Translates to: CWPGQQDPLPSSVTWLLAQLLLL*ELVRHC
Trigger: ACAGTGCCGGACGAGTTCTCAAAGCAAGAGAAGCTG...AGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR TCA 90 bp CCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTTCTCGTGGCTGTACTGCTaGAGCCACCAGTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: PGQQDPLPSSVTWLLAEFSWLYC*SHQFFR
Trigger: TCTGAAGAACTGGTGGCTTCAGCAGTACAGCCACGA...GAACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR TCA 90 bp GGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATCCTAGGCTGCTCATGGCATaGCCACCGGCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: GNSTDRIAVRCWPGQQDPRLLMA*PPAVIP
Trigger: TGGGATTACAGCCGGTGGTCATGCCATGAGCAGCCT...AGGATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000598704.5
CDS-3UTR TCA 90 bp AGGTTTGTTGACATCCAGAATCCAGCAGCTGAGCTTGGAGATCCAGGGCTCGAGGCAGACTTGAGTTGCTaGAGTAAGGGATCCACAGTT +
Preference number: 4 (lower is better)
Translates to: RFVDIQNPAAELGDPGLEADLSC*SKGSTV
Trigger: AACTGTGGATCCCTTACTTCAGCAACTCAAGTCTGC...CTCGAGCCCTGGATCTCCAAGCTCAGCTGCTGGATTCTGGATGTCAACAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp TCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCTTGGGATCCATTCACTaGTTTGTGTGGGATCCAGTG +
Preference number: 4 (lower is better)
Translates to: SVLLWLGCWDPFTDLCGILGSIH*FVWDPV
Trigger: CACTGGATCCCACACAAATCAGTGAATGGATCCCAA...GATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR TCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGAGGAAGGCGTAGTGCTTaGAATGCAGGGATCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRGRRSA*NAGIWQ
Trigger: CTGCCAGATCCCTGCATTTCAAGCACTACGCCTTCC...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTCCAGAATCTGGTGGGTaGAGGCTTGGGAATCTGGGA +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRPESGG*RLGNLG
Trigger: TCCCAGATTCCCAAGCCTTCACCCACCAGATTCTGG...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp TATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGAGGATGCCTGGGTCTaGCGAGTCGTGGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: YPGNSTDRIAVRCWPGQQEDAWV*RVVAVL
Trigger: CAGTACAGCCACGACTCGGCAGACCCAGGCATCCTC...TTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR GCA 90 bp AATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATCCTCTTCCAGGAGCACGAGGATaGCTGGGTCTGCCGAGTCGT +
Preference number: 4 (lower is better)
Translates to: NSTDRIAVRCWPGQQDPLPGARG*LGLPSR
Trigger: ACGACTCGGCAGACCCAGGCATCCTCGTGCTCCTGG...AAGAGGATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR GCA 90 bp GGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATCCTCTATCTGGCCGCAGGTaGTGGATATGGTACCGCAGG +
Preference number: 4 (lower is better)
Translates to: GNSTDRIAVRCWPGQQDPLSGRR*WIWYRR
Trigger: CCTGCGGTACCATATCCAGCACCTGCGGCCAGATAG...AGGATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CCA 90 bp TCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCTTGGTCTTTGAGGCATaGACCTGCATGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: SVLLWLGCWDPFTDLCGILVFEA*TCMKTL
Trigger: CAAGGTCTTCATGCAGGTCCATGCCTCAAAGACCAA...GATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp AATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATCCTCTTGAGCACGAGGATGCCTaGGTCTGCCGAGTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: NSTDRIAVRCWPGQQDPLEHEDA*VCRVVA
Trigger: AGCCACGACTCGGCAGACCCAGGCATCCTCGTGCTC...AAGAGGATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTCCAGGATCTGGGTACTaGGATCTCGTGGCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRPGSGY*DLVAKE
Trigger: CTCTTTGGCCACGAGATCCCAGTACCCAGATCCTGG...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGATGGGGATTAAGGGCTaGGGTGTGGATAATCTTGAA +
Preference number: 4 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWMGIKG*GVDNLE
Trigger: TTCAAGATTATCCACACCCCAGCCCTTAATCCCCAT...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTCCGTGCTCCTGTGGTTaGGGTGTTGGGATCCATTCA +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRPCSCG*GVGIHS
Trigger: TGAATGGATCCCAACACCCCAACCACAGGAGCACGG...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGACAGGAATCCAGTGGGTaGAGTGAGGGGATCTGGGAT +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRQESSG*SEGIWD
Trigger: ATCCCAGATCCCCTCACTCCACCCACTGGATTCCTG...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
3UTR CAA 72 bp CTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTaGTGTGGGATCCAGTGGTTAAGACGTAGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LLWLGCWDPFTD*CGIQWLRRRGP
Trigger: TGGACCTCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR TCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATTCGTGGCTGTACTGCTaGAGCCACCAGTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDSWLYC*SHQFFR
Trigger: TCTGAAGAACTGGTGGCTTCAGCAGTACAGCCACGA...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000598908.5
ENST00000601322.5
CDS-3UTR TCA 90 bp ATGTTGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCCTGATAGAATTGCAGTaGGATGTTGGCCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: MLARTARSSSKLSYMAIGLIELQ*DVGQDS
Trigger: GCTGTCCTGGCCAACATCTCACTGCAATTCTATCAG...GCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR TCA 90 bp CCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTTCCTGATAGAATTGCAGTaGGATGTTGGCCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: PGQQDPLPSSVTWLLAEFLIELQ*DVGQDS
Trigger: GCTGTCCTGGCCAACATCTCACTGCAATTCTATCAG...GAACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR TCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTGTCAGCAGAAGGATCTaGGACCCAGTGTCGAGGTTA +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRVSRRI*DPVSRL
Trigger: TAACCTCGACACTGGGTCTCAGATCCTTCTGCTGAC...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATGAGGTTGCAGTGAGCTaGGATCACGTCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDEVAVS*DHVIAL
Trigger: GAGTGCAATGACGTGATCTCAGCTCACTGCAACCTC...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598704.5
CDS-3UTR GCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATCCAGCGAGATGGAAATaGCCAGAGCTCGGAAACTCT +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDPARWK*PELGNS
Trigger: AGAGTTTCCGAGCTCTGGGCATTTCCATCTCGCTGG...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp ATGTTGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCACATTTTCCAGCGAATaGAACAGGAAGTGGTCGCGC +
Preference number: 4 (lower is better)
Translates to: MLARTARSSSKLSYMAIGTFSSE*NRKWSR
Trigger: GCGCGACCACTTCCTGTTGCATTCGCTGGAAAATGT...GCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATTTTGAGGCATGGACCTaGATGAAGACCTTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDFEAWT*MKTLRR
Trigger: CCGCCTCAAGGTCTTCATGCAGGTCCATGCCTCAAA...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000598908.5
CDS-3UTR GCA 90 bp CGTGATCAGTGTTTGAAGTATAAGAGTCTAAGATTCAGGATTCAGGTACTGGGACCAGGAGCACGAGGATaGCTGGGTCTGCCGAGTCGT +
Preference number: 4 (lower is better)
Translates to: RDQCLKYKSLRFRIQVLGPGARG*LGLPSR
Trigger: ACGACTCGGCAGACCCAGGCATCCTCGTGCTCCTGG...TCCCAGTACCTGAATCCTGAATCTTAGACTCTTATACTTCAAACACTGATCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000598908.5
ENST00000601322.5
CDS-3UTR GCA 90 bp CGTGATCAGTGTTTGAAGTATAAGAGTCTAAGATTCAGGATTCAGGTACTGGGAAACCTTGTGCCTGCATaGGGGTCCGGACCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RDQCLKYKSLRFRIQVLGNLVPA*GSGPGP
Trigger: TGGCCCTGGTCCGGACCCGCATGCAGGCACAAGGTT...TCCCAGTACCTGAATCCTGAATCTTAGACTCTTATACTTCAAACACTGATCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601322.5
CDS-3UTR CCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTGAATGCAACAGGAAGTaGTCGCGCCATTCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRECNRK*SRHSCQ
Trigger: CTGGCAAGAATGGCGCGACCACTTCCTGTTGCATTC...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp TGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGGCCTGGCCAAGACCGTaGTTTTTGAACGATTCTGTT +
Preference number: 4 (lower is better)
Translates to: WPGQQDPLPSSVTWLLAEAWPRP*FLNDSV
Trigger: AACAGAATCGTTCAAAAACCACGGTCTTGGCCAGGC...CTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTGGATGTTCAGCCGGTTaGTCTTTGAGGCATGGACCT +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRGCSAG*SLRHGP
Trigger: AGGTCCATGCCTCAAAGACCAACCGGCTGAACATCC...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATGGATGTTCAGCCGGTTaGTCTTTGAGGCATGGACCT +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDGCSAG*SLRHGP
Trigger: AGGTCCATGCCTCAAAGACCAACCGGCTGAACATCC...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000598908.5
CDS-3UTR CCA 90 bp CGTGATCAGTGTTTGAAGTATAAGAGTCTAAGATTCAGGATTCAGGTACTGGGAGAGCACGAGGATGCCTaGGTCTGCCGAGTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: RDQCLKYKSLRFRIQVLGEHEDA*VCRVVA
Trigger: AGCCACGACTCGGCAGACCCAGGCATCCTCGTGCTC...TCCCAGTACCTGAATCCTGAATCTTAGACTCTTATACTTCAAACACTGATCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000598908.5
ENST00000601322.5
CDS-3UTR CCA 90 bp AGGTTTGTTGACATCCAGAATCCAGCAGCTGAGCTTGGAGATCCAGGGCTCGAGCAATGTCCAGGACCGTaGAATGCTTCCAGAAATACA +
Preference number: 4 (lower is better)
Translates to: RFVDIQNPAAELGDPGLEQCPGP*NASRNT
Trigger: TGTATTTCTGGAAGCATTCCACGGTCCTGGACATTG...CTCGAGCCCTGGATCTCCAAGCTCAGCTGCTGGATTCTGGATGTCAACAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTGGTACTGGGATCTCGTaGCCAAAGAGTAGGGATCCT +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRGTGIS*PKSRDP
Trigger: AGGATCCCTACTCTTTGGCCACGAGATCCCAGTACC...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGAGGTACTGGGATCTCGTaGCCAAAGAGTAGGGATCCT +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRGTGIS*PKSRDP
Trigger: AGGATCCCTACTCTTTGGCCACGAGATCCCAGTACC...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGAGTTTCACTAGGACACTaGATCTGGTGCCTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRVSLGH*IWCLRE
Trigger: CTCCCTCAGGCACCAGATCCAGTGTCCTAGTGAAAC...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGTGGTGAGGTTTGTTaGCATCCAGAATCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRSGEVC*HPESSS
Trigger: GCTGCTGGATTCTGGATGTCAACAAACCTCACCACT...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGTCAATGGTCATTGTaGCGTCTCGGTCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRSQWSL*RLGPCC
Trigger: ACAGCATGGACCGAGACGGCACAATGACCATTGACT...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATTGGTCGCGCCATTCTTaGCAGTCAATGGTCATTGTG +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDWSRHS*QSMVIV
Trigger: CACAATGACCATTGACTGGCAAGAATGGCGCGACCA...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGATGGTCGCGCCATTCTTaGCAGTCAATGGTCATTGTG +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRWSRHS*QSMVIV
Trigger: CACAATGACCATTGACTGGCAAGAATGGCGCGACCA...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp CCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTTCGAAGAGAGCGTGGAATaGTTCCAGAAATACAGCACG +
Preference number: 4 (lower is better)
Translates to: PGQQDPLPSSVTWLLAEFEESVE*FQKYST
Trigger: CGTGCTGTATTTCTGGAAGCATTCCACGCTCTCTTC...GAACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp CGTGATCAGTGTTTGAAGTATAAGAGTCTAAGATTCAGGATTCAGGTACTGGGAGAGGATGCCTGGGTCTaGCGAGTCGTGGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: RDQCLKYKSLRFRIQVLGEDAWV*RVVAVL
Trigger: CAGTACAGCCACGACTCGGCAGACCCAGGCATCCTC...TCCCAGTACCTGAATCCTGAATCTTAGACTCTTATACTTCAAACACTGATCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000598908.5
ENST00000601322.5
CDS-3UTR GCA 90 bp AATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATCCTCTTCTATCTGGCCGCAGGTaGTGGATATGGTACCGCAGG +
Preference number: 4 (lower is better)
Translates to: NSTDRIAVRCWPGQQDPLLSGRR*WIWYRR
Trigger: CCTGCGGTACCATATCCAGCACCTGCGGCCAGATAG...AAGAGGATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR GCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGATCCAGGACCGTGGAATaGTTCCAGAAATACAGCACG +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRSRTVE*FQKYST
Trigger: CGTGCTGTATTTCTGGAAGCATTCCACGGTCCTGGA...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp CGTGATCAGTGTTTGAAGTATAAGAGTCTAAGATTCAGGATTCAGGTACTGGGATCTGGCCGCAGGTGCTaGATATGGTACCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RDQCLKYKSLRFRIQVLGSGRRC*IWYRRP
Trigger: TGGCCTGCGGTACCATATCCAGCACCTGCGGCCAGA...TCCCAGTACCTGAATCCTGAATCTTAGACTCTTATACTTCAAACACTGATCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000598908.5
ENST00000601322.5
CDS-3UTR CCA 90 bp TCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCTTAAGGGCTGGGGTGTaGATAATCTTGAATCTTGTG +
Preference number: 4 (lower is better)
Translates to: SVLLWLGCWDPFTDLCGILRAGV*IILNLV
Trigger: CACAAGATTCAAGATTATCCACACCCCAGCCCTTAA...GATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTTTAGGAGCCAGAATCTaGTGGGTGAAGGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRLGARI*WVKAWE
Trigger: TTCCCAAGCCTTCACCCACCAGATTCTGGCTCCTAA...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR TCA 90 bp TATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAATCGTGGCTGTACTGCTaGAGCCACCAGTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: YPGNSTDRIAVRCWPGQQSWLYC*SHQFFR
Trigger: TCTGAAGAACTGGTGGCTTCAGCAGTACAGCCACGA...TTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR TCA 90 bp TTGGACTATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGAAGGCAGAGGTTGCAGTaGTCTGAAATCGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: LDYPGNSTDRIAVRCWPGRQRLQ*SEIEPL
Trigger: CAGTGGCTCGATTTCAGATCACTGCAACCTCTGCCT...TCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATAGTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR TCA 90 bp CGTGATCAGTGTTTGAAGTATAAGAGTCTAAGATTCAGGATTCAGGTACTGGGAAGGCTGCTCATGGCATaGCCACCGGCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: RDQCLKYKSLRFRIQVLGRLLMA*PPAVIP
Trigger: TGGGATTACAGCCGGTGGTCATGCCATGAGCAGCCT...TCCCAGTACCTGAATCCTGAATCTTAGACTCTTATACTTCAAACACTGATCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264088.8
ENST00000598704.5
ENST00000598908.5
CDS-3UTR TCA 90 bp TGTTGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTATCTCACCCATATTCTaGGCATTAGGAACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: CWPGQQDPLPSSVTWLLAISPIF*ALGTQE
Trigger: CTCCTGAGTTCCTAATGCTCAGAATATGGGTGAGAT...AGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
CDS-3UTR TCA 90 bp ATGTTGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCATCTCACCCATATTCTaGGCATTAGGAACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: MLARTARSSSKLSYMAIGISPIF*ALGTQE
Trigger: CTCCTGAGTTCCTAATGCTCAGAATATGGGTGAGAT...GCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
CDS-3UTR TCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTGCAGACTTGAGTTGCTaGAGTAAGGGATCCACAGTT +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRADLSC*SKGSTV
Trigger: AACTGTGGATCCCTTACTTCAGCAACTCAAGTCTGC...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR TCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGATTGGGATCCATTCACTaGTTTGTGTGGGATCCAGTG +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRLGSIH*FVWDPV
Trigger: CACTGGATCCCACACAAATCAGTGAATGGATCCCAA...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR GCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATTCTCGGTCCATGCTGTaGAAAATTTTCTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDSRSML*KIFSAC
Trigger: GCAGGCTGAGAAAATTTTGCACAGCATGGACCGAGA...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGATCTCGGTCCATGCTGTaGAAAATTTTCTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRSRSML*KIFSAC
Trigger: GCAGGCTGAGAAAATTTTGCACAGCATGGACCGAGA...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp CGTGATCAGTGTTTGAAGTATAAGAGTCTAAGATTCAGGATTCAGGTACTGGGACTATCTGGCCGCAGGTaGTGGATATGGTACCGCAGG +
Preference number: 4 (lower is better)
Translates to: RDQCLKYKSLRFRIQVLGLSGRR*WIWYRR
Trigger: CCTGCGGTACCATATCCAGCACCTGCGGCCAGATAG...TCCCAGTACCTGAATCCTGAATCTTAGACTCTTATACTTCAAACACTGATCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000598908.5
ENST00000601322.5
CDS-3UTR CCA 90 bp ATGTTGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCGCTCGGAAACTCTGTTaGATCTCAGAGACATCAATG +
Preference number: 4 (lower is better)
Translates to: MLARTARSSSKLSYMAIGARKLC*ISETSM
Trigger: CATTGATGTCTCTGAGATCCAACAGAGTTTCCGAGC...GCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTATTCTTGCCAGTCAATaGTCATTGTGCCGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRILASQ*SLCRLG
Trigger: ACCGAGACGGCACAATGACCATTGACTGGCAAGAAT...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp TGTTGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTCAGCAGAAGAGAGCGTaGAATGCTTCCAGAAATACA +
Preference number: 4 (lower is better)
Translates to: CWPGQQDPLPSSVTWLLAQQKRA*NASRNT
Trigger: TGTATTTCTGGAAGCATTCCACGCTCTCTTCTGCTG...AGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATTTGGTCTTTGAGGCATaGACCTGCATGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDLVFEA*TCMKTL
Trigger: CAAGGTCTTCATGCAGGTCCATGCCTCAAAGACCAA...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000598908.5
CDS-3UTR CCA 90 bp TATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGGATGTTCAGCCGGTTaGTCTTTGAGGCATGGACCT +
Preference number: 4 (lower is better)
Translates to: YPGNSTDRIAVRCWPGQQGCSAG*SLRHGP
Trigger: AGGTCCATGCCTCAAAGACCAACCGGCTGAACATCC...TTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CCA 90 bp GGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTCAGTTACATGGCTATTaGCTGAGTTCCTTACCACAT +
Preference number: 4 (lower is better)
Translates to: GQDSKILFQAQLHGYWLSQLHGY*LSSLPH
Trigger: ATGTGGTAAGGAACTCAGCCAATAGCCATGTAACTG...ACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGAGTAGGGATCCTGTaGTTGGATCATCAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRRVGIL*LDHQSP
Trigger: TGGAGACTGATGATCCAACCACAGGATCCCTACTCT...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTTTGTGTGGGATCCAGTaGTTAAGACGTAGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRLCGIQ*LRRRGP
Trigger: TGGACCTCTACGTCTTAACCACTGGATCCCACACAA...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGACTGTGGTTGGGGTGTTaGGATCCATTCACTGATTTG +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRLWLGC*DPFTDL
Trigger: CAAATCAGTGAATGGATCCCAACACCCCAACCACAG...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR TCA 90 bp CGTGATCAGTGTTTGAAGTATAAGAGTCTAAGATTCAGGATTCAGGTACTGGGACAGCCGGTTGGTCTTTaGGGCATGGACCTGCATGAA +
Preference number: 4 (lower is better)
Translates to: RDQCLKYKSLRFRIQVLGQPVGL*GMDLHE
Trigger: TTCATGCAGGTCCATGCCTCAAAGACCAACCGGCTG...TCCCAGTACCTGAATCCTGAATCTTAGACTCTTATACTTCAAACACTGATCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000598908.5
CDS-3UTR TCA 90 bp AGCTTGGACTATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCACTGATAGAATTGCAGTaGGATGTTGGCCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: SLDYPGNSTDRIAVRCWPLIELQ*DVGQDS
Trigger: GCTGTCCTGGCCAACATCTCACTGCAATTCTATCAG...TGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATAGTCCAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR TCA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATATCTCACCCATATTCTaGGCATTAGGAACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDISPIF*ALGTQE
Trigger: CTCCTGAGTTCCTAATGCTCAGAATATGGGTGAGAT...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000598908.5
CDS-3UTR GCA 90 bp TATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAATTCGGCCTCCCAAAGTaGTGGGATTTTAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: YPGNSTDRIAVRCWPGQQFGLPK*WDFRCE
Trigger: CTCACACCTAAAATCCCAGCACTTTGGGAGGCCGAA...TTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CCA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTGCTCGGAAACTCTGTTaGATCTCAGAGACATCAATG +
Preference number: 4 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRARKLC*ISETSM
Trigger: CATTGATGTCTCTGAGATCCAACAGAGTTTCCGAGC...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CCA 90 bp GGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATCCTATTCTTGCCAGTCAATaGTCATTGTGCCGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: GNSTDRIAVRCWPGQQDPILASQ*SLCRLG
Trigger: ACCGAGACGGCACAATGACCATTGACTGGCAAGAAT...AGGATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CCA 90 bp AATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATCCTCTTGAATGCAACAGGAAGTaGTCGCGCCATTCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: NSTDRIAVRCWPGQQDPLECNRK*SRHSCQ
Trigger: CTGGCAAGAATGGCGCGACCACTTCCTGTTGCATTC...AAGAGGATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CCA 90 bp GGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATCCTTTGGTCTTTGAGGCATaGACCTGCATGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: GNSTDRIAVRCWPGQQDPLVFEA*TCMKTL
Trigger: CAAGGTCTTCATGCAGGTCCATGCCTCAAAGACCAA...AGGATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CCA 90 bp ATGTTGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCCAGTTACATGGCTATTaGCTGAGTTCCTTACCACAT +
Preference number: 4 (lower is better)
Translates to: MLARTARSSSKLSYMAIGQLHGY*LSSLPH
Trigger: ATGTGGTAAGGAACTCAGCCAATAGCCATGTAACTG...GCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
3UTR CAA 72 bp GGGATCCAGTTGTTTCGGTGGAGGGATCCACAAAGCTaGGACTATCCAGGGAATTCAACTGATAGAATTGCA +
Preference number: 4 (lower is better)
Translates to: GIQLFRWRDPQS*DYPGNSTDRIA
Trigger: TGCAATTCTATCAGTTGAATTCCCTGGATAGTCCAAGCTTTGTGGATCCCTCCACCGAAACAACTGGATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
3UTR CAA 72 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTaGTTTCGGTGGAGGGATCCACAAAGCTTGGACTAT +
Preference number: 4 (lower is better)
Translates to: ESKIQDSGTGIQ*FRWRDPQSLDY
Trigger: ATAGTCCAAGCTTTGTGGATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR TCA 90 bp TTGGACTATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAAGACCGTGGTTTTTaGACGATTCTGTTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: LDYPGNSTDRIAVRCWPGQDRGF*TILFSR
Trigger: ACGGCTGAACAGAATCGTTCAAAAACCACGGTCTTG...TCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATAGTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp AATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATCCTCTTCTGGAAGGCAGAGGTTaGAGTGATCTGAAATCGAGC +
Preference number: 4 (lower is better)
Translates to: NSTDRIAVRCWPGQQDPLLEGRG*SDLKSS
Trigger: GCTCGATTTCAGATCACTGCAACCTCTGCCTTCCAG...AAGAGGATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGAAAAACCAAAAACCAATaGAGGAATCCAGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRKTKNQ*RNPVGG
Trigger: TCCACCCACTGGATTCCTGCATTGGTTTTTGGTTTT...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR GCA 90 bp CGTGATCAGTGTTTGAAGTATAAGAGTCTAAGATTCAGGATTCAGGTACTGGGAATGATGAAATCCTTGTaGCTGCATGCGGGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: RDQCLKYKSLRFRIQVLGMMKSL*LHAGPD
Trigger: GTCCGGACCCGCATGCAGGCACAAGGATTTCATCAT...TCCCAGTACCTGAATCCTGAATCTTAGACTCTTATACTTCAAACACTGATCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598908.5
CDS-3UTR GCA 90 bp CCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATAAAATTTTCTCAGCCTaGTCCAGCGAGATGGAAATG +
Preference number: 4 (lower is better)
Translates to: PGNSTDRIAVRCWPGQQDKIFSA*SSEMEM
Trigger: CATTTCCATCTCGCTGGAGCAGGCTGAGAAAATTTT...ATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR GCA 90 bp CGTGATCAGTGTTTGAAGTATAAGAGTCTAAGATTCAGGATTCAGGTACTGGGAAGTCAATGGTCATTGTaGCGTCTCGGTCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: RDQCLKYKSLRFRIQVLGSQWSL*RLGPCC
Trigger: ACAGCATGGACCGAGACGGCACAATGACCATTGACT...TCCCAGTACCTGAATCCTGAATCTTAGACTCTTATACTTCAAACACTGATCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CCA 90 bp CCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATCAGTTACATGGCTATTaGCTGAGTTCCTTACCACAT +
Preference number: 4 (lower is better)
Translates to: PGNSTDRIAVRCWPGQQDQLHGY*LSSLPH
Trigger: ATGTGGTAAGGAACTCAGCCAATAGCCATGTAACTG...ATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CCA 90 bp TTGGACTATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGTTACATGGCTATTaGCTGAGTTCCTTACCACAT +
Preference number: 4 (lower is better)
Translates to: LDYPGNSTDRIAVRCWPGQLHGY*LSSLPH
Trigger: ATGTGGTAAGGAACTCAGCCAATAGCCATGTAACTG...TCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATAGTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CCA 90 bp CGTGATCAGTGTTTGAAGTATAAGAGTCTAAGATTCAGGATTCAGGTACTGGGACAGTTACATGGCTATTaGCTGAGTTCCTTACCACAT +
Preference number: 4 (lower is better)
Translates to: RDQCLKYKSLRFRIQVLGQLHGY*LSSLPH
Trigger: ATGTGGTAAGGAACTCAGCCAATAGCCATGTAACTG...TCCCAGTACCTGAATCCTGAATCTTAGACTCTTATACTTCAAACACTGATCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000598908.5
ENST00000601322.5
CDS TCA 90 bp GCCTGTGAGCTCTATGAGGGTGGGGACCGTGTCCGTCTTGTACACTaGCACATCTTGTGCCTGCATGCGGGTCCGGACCAGGGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: ACELYEGGDRVRLVH*HILCLHAGPDQGQR
Trigger: CCGCTGGCCCTGGTCCGGACCCGCATGCAGGCACAAGATGTGTCAGTGTACAAGACGGACACGGTCCCCACCCTCATAGAGCTCACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334510.9
CDS GCA 90 bp CATGGTCCTCTCCATAAGGCTGCTCATGGCATGACCACCGGCTTGTaGCTGCATGCGGGTCCGGACCAGGGCCAGCGGGTAACTGGCTAT +
Preference number: 5 (lower is better)
Translates to: HGPLHKAAHGMTTGL*LHAGPDQGQRVTGY
Trigger: ATAGCCAGTTACCCGCTGGCCCTGGTCCGGACCCGCATGCAGGCACAAGCCGGTGGTCATGCCATGAGCAGCCTTATGGAGAGGACCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595810.5
CDS CCA 90 bp CTCCTGCAGATAGCGGGAAAATTCCTCCAGGTCGAGCCCGCCATCTaGGTCAGCATCACCCTCAGAGGAGATACCCTGTTGGGCGCCGGG +
Preference number: 5 (lower is better)
Translates to: LLQIAGKFLQVEPAI*VSITLRGDTLLGAG
Trigger: CCCGGCGCCCAACAGGGTATCTCCTCTGAGGGTGATGCTGACCCAGATGGCGGGCTCGACCTGGAGGAATTTTCCCGCTATCTGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
CDS-3UTR CAA 90 bp GGGGGCCCCAGGATCCAGGCATTGTGGTTGTCAGGATCCAGTGGTGAGGTTTGTGTTGCCAGGATCCACTaGCTGTGCCACTGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: GGPRIQALWLSGSSGEVCVARIH*LCHWGP
Trigger: GGGGCCCCAGTGGCACAGCAAGTGGATCCTGGCAAC...ACAAACCTCACCACTGGATCCTGACAACCACAATGCCTGGATCCTGGGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS GCA 90 bp GTTCGAGATGAGCCTGGGCAACATGATGAAATCCTTGTGCCTGCATaGGGGTCCGGACCAGGGCCAGCGGGTAACTGGCTATCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: VRDEPGQHDEILVPA*GSGPGPAGNWLSGR
Trigger: GCGGCCAGATAGCCAGTTACCCGCTGGCCCTGGTCCGGACCCGCATGCAGGCACAAGGATTTCATCATGTTGCCCAGGCTCATCTCGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598908.5
CDS-3UTR CAA 90 bp GGGGGCCCCAGGATCCAGGCATTGTGGTTGTCAGGATCCAGTGGTGAGGTTTGTAGAGGAGATACCCTGTaGGGCGCCGGGGTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: GGPRIQALWLSGSSGEVCRGDTL*GAGVWV
Trigger: AACCCAGACCCCGGCGCCCAACAGGGTATCTCCTCT...ACAAACCTCACCACTGGATCCTGACAACCACAATGCCTGGATCCTGGGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CAA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATACCCTCGATGGAGGCTaGTGCCTGCATGCGGGTCCG +
Preference number: 5 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDTLDGG*CLHAGP
Trigger: CGGACCCGCATGCAGGCACAAGCCTCCATCGAGGGT...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CAA 90 bp TGGGTGTTGAGGTACAGGGAATCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCAACCTGCATGAAGACCTaGAGGCGGTCCAGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: WVLRYRESVLLWLGCWDPTCMKT*RRSRGA
Trigger: GGCCCCTCTGGACCGCCTCAAGGTCTTCATGCAGGT...TGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCTCAACACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS TCA 90 bp GGCCACCAGCTGTTTCCACCACATGCCCGTCAGCTTCTCTTGCTTTaGGAACTCGTCCGGCACTGTCAGGCACTCGCCAATGTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: GHQLFPPHARQLLLL*ELVRHCQALANVQD
Trigger: GTCCTGGACATTGGCGAGTGCCTGACAGTGCCGGACGAGTTCTCAAAGCAAGAGAAGCTGACGGGCATGTGGTGGAAACAGCTGGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
CDS GCA 90 bp AGAGGTTGCAGTGATCTGAAATCGAGCCACTGTACTCCAGCCTTGTaGCTGCATGCGGGTCCGGACCAGGGCCAGCGGGTAACTGGCTAT +
Preference number: 5 (lower is better)
Translates to: RGCSDLKSSHCTPAL*LHAGPDQGQRVTGY
Trigger: ATAGCCAGTTACCCGCTGGCCCTGGTCCGGACCCGCATGCAGGCACAAGGCTGGAGTACAGTGGCTCGATTTCAGATCACTGCAACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000601760.1
CDS-3UTR CAA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGACCTGCATGAAGACCTaGAGGCGGTCCAGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWTCMKT*RRSRGA
Trigger: GGCCCCTCTGGACCGCCTCAAGGTCTTCATGCAGGT...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS CCA 90 bp CTCCTGCAGATAGCGGGAAAATTCCTCCAGGTCGAGCCCGCCATCTaGGTCAGCATCACCCTCAGAGGAGATACCCTCTCGAGTCGTCTT +
Preference number: 5 (lower is better)
Translates to: LLQIAGKFLQVEPAI*VSITLRGDTLSSRL
Trigger: AAGACGACTCGAGAGGGTATCTCCTCTGAGGGTGATGCTGACCCAGATGGCGGGCTCGACCTGGAGGAATTTTCCCGCTATCTGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597307.1
CDS-3UTR CAA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGTCCACGCGGCCATCCTaGTTACTGTCCAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWSTRPS*LLSSSS
Trigger: CGAGGAGCTGGACAGTAACAAGGATGGCCGCGTGGA...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CAA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATTCCGTGCTCCTGTGGTaGGGGTGTTGGGATCCATTC +
Preference number: 5 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDSVLLW*GCWDPF
Trigger: GAATGGATCCCAACACCCCAACCACAGGAGCACGGA...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CAA 90 bp GGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTAGAGGAGATACCCTGTaGGGCGCCGGGGTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: GQDSKILFQAQLHGYWLSRGDTL*GAGVWV
Trigger: AACCCAGACCCCGGCGCCCAACAGGGTATCTCCTCT...ACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CAA 90 bp GGGGGCCCCAGGATCCAGGCATTGTGGTTGTCAGGATCCAGTGGTGAGGTTTGTTCAGCTTCTCTTGCTTaGAGAACTCGTCCGGCACTG +
Preference number: 5 (lower is better)
Translates to: GGPRIQALWLSGSSGEVCSASLA*RTRPAL
Trigger: CAGTGCCGGACGAGTTCTCAAAGCAAGAGAAGCTGA...ACAAACCTCACCACTGGATCCTGACAACCACAATGCCTGGATCCTGGGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CAA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATAGGATGTTCAGCCGGTaGGTCTTTGAGGCATGGACC +
Preference number: 5 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDRMFSR*VFEAWT
Trigger: GGTCCATGCCTCAAAGACCAACCGGCTGAACATCCT...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CAA 90 bp TGGGTGTTGAGGTACAGGGAATCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCAAGTACATTAATACCATaGCCGCGCCACAGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: WVLRYRESVLLWLGCWDPSTLIP*PRHRER
Trigger: CCGCTCCCTGTGGCGCGGCAATGGTATTAATGTACT...TGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCTCAACACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CAA 90 bp TGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGCACTGTACTCCAGCCTaGTGCCTGCATGCGGGTCCG +
Preference number: 5 (lower is better)
Translates to: WPGQQDPLPSSVTWLLAEHCTPA*CLHAGP
Trigger: CGGACCCGCATGCAGGCACAAGGCTGGAGTACAGTG...CTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CAA 90 bp TGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTCCACGCGGCCATCCTaGTTACTGTCCAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: WPGQQDPLPSSVTWLLAESTRPS*LLSSSS
Trigger: CGAGGAGCTGGACAGTAACAAGGATGGCCGCGTGGA...CTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CAA 90 bp TGGGTGTTGAGGTACAGGGAATCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCAGTGGTCGCGCCATTCTaGCCAGTCAATGGTCATTGT +
Preference number: 5 (lower is better)
Translates to: WVLRYRESVLLWLGCWDPVVAPF*PVNGHC
Trigger: ACAATGACCATTGACTGGCAAGAATGGCGCGACCAC...TGGATCCCAACACCCCAACCACAGGAGCACGGATTCCCTGTACCTCAACACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CAA 90 bp CCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTTCACCTGCATGAAGACCTaGAGGCGGTCCAGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: PGQQDPLPSSVTWLLAEFTCMKT*RRSRGA
Trigger: GGCCCCTCTGGACCGCCTCAAGGTCTTCATGCAGGT...GAACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CAA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTACCCTCGATGGAGGCTaGTGCCTGCATGCGGGTCCG +
Preference number: 5 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRTLDGG*CLHAGP
Trigger: CGGACCCGCATGCAGGCACAAGCCTCCATCGAGGGT...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CAA 90 bp TGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGGAGCGAAACTGCATCTaGTGCCTGCATGCGGGTCCG +
Preference number: 5 (lower is better)
Translates to: WPGQQDPLPSSVTWLLAEERNCI*CLHAGP
Trigger: CGGACCCGCATGCAGGCACAAGATGCAGTTTCGCTC...CTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598704.5
CDS-3UTR CAA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATACCTGCATGAAGACCTaGAGGCGGTCCAGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDTCMKT*RRSRGA
Trigger: GGCCCCTCTGGACCGCCTCAAGGTCTTCATGCAGGT...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000598908.5
CDS-3UTR CAA 90 bp TCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCAGTACATTAATACCATaGCCGCGCCACAGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: SVLLWLGCWDPFTDLCGISTLIP*PRHRER
Trigger: CCGCTCCCTGTGGCGCGGCAATGGTATTAATGTACT...GATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CAA 90 bp AGCTTGGACTATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGCATGACCACCGGCTaGTGCCTGCATGCGGGTCCG +
Preference number: 5 (lower is better)
Translates to: SLDYPGNSTDRIAVRCWPGMTTG*CLHAGP
Trigger: CGGACCCGCATGCAGGCACAAGCCGGTGGTCATGCC...TGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATAGTCCAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595810.5
CDS-3UTR CAA 90 bp GGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTAGGATGTTCAGCCGGTaGGTCTTTGAGGCATGGACC +
Preference number: 5 (lower is better)
Translates to: GQDSKILFQAQLHGYWLSRMFSR*VFEAWT
Trigger: GGTCCATGCCTCAAAGACCAACCGGCTGAACATCCT...ACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CAA 90 bp CATAAGGCTGCTCATGGCATGACCACCGGCTGTAATCCCAGCTATTCTGGAGGCAATTGCAGTGAGATGTaGGCCAGGACAGCAAGATCC +
Preference number: 5 (lower is better)
Translates to: HKAAHGMTTGCNPSYSGGNCSEM*ARTARS
Trigger: GGATCTTGCTGTCCTGGCCAACATCTCACTGCAATT...GCCTCCAGAATAGCTGGGATTACAGCCGGTGGTCATGCCATGAGCAGCCTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598704.5
CDS-3UTR CAA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGAGGCAGGGTCTGGGTGTaGAGGTACAGGGAATCCGTG +
Preference number: 5 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRGRVWV*RYRESV
Trigger: CACGGATTCCCTGTACCTCAACACCCAGACCCTGCC...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CAA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGAATCCAGCAGCTGAGCTaGGAGATCCAGGGCTCGAGG +
Preference number: 5 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRIQQLS*EIQGSR
Trigger: CCTCGAGCCCTGGATCTCCAAGCTCAGCTGCTGGAT...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS CCA 90 bp CCAGCGAATGCAACAGGAAGTGGTCGCGCCATTCTTGCCAGTCAATaGTCATTGTGCCGTCTCGGTCCATGCTGTGCAAAATTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: PANATGSGRAILASQ*SLCRLGPCCAKFSQ
Trigger: CTGAGAAAATTTTGCACAGCATGGACCGAGACGGCACAATGACCATTGACTGGCAAGAATGGCGCGACCACTTCCTGTTGCATTCGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
ENST00000597307.1
CDS-3UTR CAA 90 bp TGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTCAGCTTCTCTTGCTTaGAGAACTCGTCCGGCACTG +
Preference number: 5 (lower is better)
Translates to: WPGQQDPLPSSVTWLLAESASLA*RTRPAL
Trigger: CAGTGCCGGACGAGTTCTCAAAGCAAGAGAAGCTGA...CTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CAA 90 bp AGCGTGGGATCCACCTTAGGATGTGGGGCTGCAGGATCCAGTGATTTGGGGGATGATCCATTCACTGATTaGTGTGGGATCCAGTGGTTA +
Preference number: 5 (lower is better)
Translates to: SVGSTLGCGAAGSSDLGDDPFTD*CGIQWL
Trigger: TAACCACTGGATCCCACACAAATCAGTGAATGGATC...ATCCCCCAAATCACTGGATCCTGCAGCCCCACATCCTAAGGTGGATCCCACGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CAA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTTCCGTGCTCCTGTGGTaGGGGTGTTGGGATCCATTC +
Preference number: 5 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRSVLLW*GCWDPF
Trigger: GAATGGATCCCAACACCCCAACCACAGGAGCACGGA...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CAA 90 bp CCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTTCAGGCAGGAGAATCGCTaGAACCTTGTGCCTGCATGC +
Preference number: 5 (lower is better)
Translates to: PGQQDPLPSSVTWLLAEFRQENR*NLVPAC
Trigger: GCATGCAGGCACAAGGTTCAAGCGATTCTCCTGCCT...GAACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601322.5
CDS-3UTR CAA 90 bp CCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTTCGCTGAGATCACGTCATaGCACTCCAGCCTGGGAAAC +
Preference number: 5 (lower is better)
Translates to: PGQQDPLPSSVTWLLAEFAEITS*HSSLGN
Trigger: GTTTCCCAGGCTGGAGTGCAATGACGTGATCTCAGC...GAACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598704.5
CDS TCA 90 bp AGACATCAATGTGACCATCCTGGTTCCGGTCAAGACTGTGAAACATaGGCAGCAGACGCTGTTCCCGCTCCTGCAGATAGCGGGAAAATT +
Preference number: 5 (lower is better)
Translates to: RHQCDHPGSGQDCET*AADAVPAPADSGKI
Trigger: AATTTTCCCGCTATCTGCAGGAGCGGGAACAGCGTCTGCTGCTCATGTTTCACAGTCTTGACCGGAACCAGGATGGTCACATTGATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
ENST00000597307.1
CDS CCA 90 bp CTCGGTCCATGCTGTGCAAAATTTTCTCAGCCTGCTCCAGCGAGATaGAAATGCCCAGAGCTCGGAAACTCTGTTGGATCTCAGAGACAT +
Preference number: 5 (lower is better)
Translates to: LGPCCAKFSQPAPAR*KCPELGNSVGSQRH
Trigger: ATGTCTCTGAGATCCAACAGAGTTTCCGAGCTCTGGGCATTTCCATCTCGCTGGAGCAGGCTGAGAAAATTTTGCACAGCATGGACCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
ENST00000597307.1
CDS-3UTR CAA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATAGGATGTTCAGCCGGTaGGTCTTTGAGGCATGGACC +
Preference number: 5 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDRMFSR*VFEAWT
Trigger: GGTCCATGCCTCAAAGACCAACCGGCTGAACATCCT...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000598908.5
CDS-3UTR CAA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGGACTCGGGGGCAATCTaGAGTACATTAATACCATTG +
Preference number: 5 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWDSGAI*STLIPL
Trigger: CAATGGTATTAATGTACTCAAGATTGCCCCCGAGTC...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CAA 90 bp GGGATCCACAGTTATGGTTACAGGGGGATCTGGGATCTAGTGGCTGAAGGGTGGGATCCATTCACTGATTaGTGTGGGATCCAGTGGTTA +
Preference number: 5 (lower is better)
Translates to: GIHSYGYRGIWDLVAEGWDPFTD*CGIQWL
Trigger: TAACCACTGGATCCCACACAAATCAGTGAATGGATC...CCACCCTTCAGCCACTAGATCCCAGATCCCCCTGTAACCATAACTGTGGATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CAA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTCCCAGGATCCAGGCATaGTGGTTGTCAGGATCCAGT +
Preference number: 5 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRPRIQA*WLSGSS
Trigger: ACTGGATCCTGACAACCACAATGCCTGGATCCTGGG...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301454.9
CDS-3UTR CAA 90 bp TATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAAGGCAGGAGGATCACTaGAACCCGGGAAGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: YPGNSTDRIAVRCWPGQQRQEDH*NPGSGG
Trigger: ACCTCCGCTTCCCGGGTTCAAGTGATCCTCCTGCCT...TTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598704.5
CDS-3UTR CAA 90 bp ATGTTGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCAATTGCAGTGAGATGTaGGCCAGGACAGCAAGATCC +
Preference number: 5 (lower is better)
Translates to: MLARTARSSSKLSYMAIGNCSEM*ARTARS
Trigger: GGATCTTGCTGTCCTGGCCAACATCTCACTGCAATT...GCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CAA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTGTAGGGATCCTGTGGTaGGATCATCAGTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRVGILW*DHQSPV
Trigger: CACTGGAGACTGATGATCCAACCACAGGATCCCTAC...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CAA 90 bp TCCGTGCTCCTGTGGTTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCGGGGTGTGGATAATCTaGAATCTTGTGGTTAGGGTA +
Preference number: 5 (lower is better)
Translates to: SVLLWLGCWDPFTDLCGIGVWII*NLVVRV
Trigger: TACCCTAACCACAAGATTCAAGATTATCCACACCCC...GATCCCACACAAATCAGTGAATGGATCCCAACACCCCAACCACAGGAGCACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS GCA 90 bp CCATGCTGTGCAAAATTTTCTCAGCCTGCTCCAGCGAGATGGAAATaGCCAGAGCTCGGAAACTCTGTTGGATCTCAGAGACATCAATGT +
Preference number: 5 (lower is better)
Translates to: PCCAKFSQPAPARWK*PELGNSVGSQRHQC
Trigger: ACATTGATGTCTCTGAGATCCAACAGAGTTTCCGAGCTCTGGGCATTTCCATCTCGCTGGAGCAGGCTGAGAAAATTTTGCACAGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
ENST00000597307.1
CDS GCA 90 bp GAATGCTTCCAGAAATACAGCACGTCCTCCACATTTTCCAGCGAATaGAACAGGAAGTGGTCGCGCCATTCTTGCCAGTCAATGGTCATT +
Preference number: 5 (lower is better)
Translates to: ECFQKYSTSSTFSSE*NRKWSRHSCQSMVI
Trigger: AATGACCATTGACTGGCAAGAATGGCGCGACCACTTCCTGTTGCATTCGCTGGAAAATGTGGAGGACGTGCTGTATTTCTGGAAGCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
ENST00000597307.1
CDS-3UTR CAA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATAATTGCAGTGAGATGTaGGCCAGGACAGCAAGATCC +
Preference number: 5 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDNCSEM*ARTARS
Trigger: GGATCTTGCTGTCCTGGCCAACATCTCACTGCAATT...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000598908.5
ENST00000601322.5
CDS-3UTR CAA 90 bp CCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTTCAGGGATCCACAAAGCTaGGACTATCCAGGGAATTCA +
Preference number: 5 (lower is better)
Translates to: PGQQDPLPSSVTWLLAEFRDPQS*DYPGNS
Trigger: TGAATTCCCTGGATAGTCCAAGCTTTGTGGATCCCT...GAACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CAA 90 bp CCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCTGAGTTCAGCTCGGAAACTCTGTaGGATCTCAGAGACATCAAT +
Preference number: 5 (lower is better)
Translates to: PGQQDPLPSSVTWLLAEFSSETL*DLRDIN
Trigger: ATTGATGTCTCTGAGATCCAACAGAGTTTCCGAGCT...GAACTCAGCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CAA 90 bp TATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGTGGTCGCGCCATTCTaGCCAGTCAATGGTCATTGT +
Preference number: 5 (lower is better)
Translates to: YPGNSTDRIAVRCWPGQQVVAPF*PVNGHC
Trigger: ACAATGACCATTGACTGGCAAGAATGGCGCGACCAC...TTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CAA 90 bp ATGTTGGCCAGGACAGCAAGATCCTCTTCCAAGCTCAGTTACATGGCTATTGGCGACTCGGGGGCAATCTaGAGTACATTAATACCATTG +
Preference number: 5 (lower is better)
Translates to: MLARTARSSSKLSYMAIGDSGAI*STLIPL
Trigger: CAATGGTATTAATGTACTCAAGATTGCCCCCGAGTC...GCCAATAGCCATGTAACTGAGCTTGGAAGAGGATCTTGCTGTCCTGGCCAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS-3UTR CAA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATAGGGATCCACAAAGCTaGGACTATCCAGGGAATTCA +
Preference number: 5 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDRDPQS*DYPGNS
Trigger: TGAATTCCCTGGATAGTCCAAGCTTTGTGGATCCCT...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000598908.5
ENST00000601322.5
CDS-3UTR CAA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATTGTATTAGCCAGCTGTaGCCATGTGACGAATTACCC +
Preference number: 5 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDCISQL*PCDELP
Trigger: GGGTAATTCGTCACATGGCAACAGCTGGCTAATACA...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000598908.5
CDS-3UTR CAA 90 bp CGTGATCAGTGTTTGAAGTATAAGAGTCTAAGATTCAGGATTCAGGTACTGGGAAGTACATTAATACCATaGCCGCGCCACAGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: RDQCLKYKSLRFRIQVLGSTLIP*PRHRER
Trigger: CCGCTCCCTGTGGCGCGGCAATGGTATTAATGTACT...TCCCAGTACCTGAATCCTGAATCTTAGACTCTTATACTTCAAACACTGATCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000598908.5
CDS-3UTR CAA 90 bp GAGTCTAAGATTCAGGATTCAGGTACTGGGATCCAGTTGTTTCGGTGGAGGGATGACTCGGGGGCAATCTaGAGTACATTAATACCATTG +
Preference number: 5 (lower is better)
Translates to: ESKIQDSGTGIQLFRWRDDSGAI*STLIPL
Trigger: CAATGGTATTAATGTACTCAAGATTGCCCCCGAGTC...ATCCCTCCACCGAAACAACTGGATCCCAGTACCTGAATCCTGAATCTTAGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000598908.5
CDS-3UTR CAA 90 bp GGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTAGAGACTCGGGGGCAATCTaGAGTACATTAATACCATTG +
Preference number: 5 (lower is better)
Translates to: GCWDPFTDLCGIQWLRRRDSGAI*STLIPL
Trigger: CAATGGTATTAATGTACTCAAGATTGCCCCCGAGTC...TCTACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CAA 90 bp TTGGACTATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGAAATTGCAGTGAGATGTaGGCCAGGACAGCAAGATCC +
Preference number: 5 (lower is better)
Translates to: LDYPGNSTDRIAVRCWPGNCSEM*ARTARS
Trigger: GGATCTTGCTGTCCTGGCCAACATCTCACTGCAATT...TCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATAGTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CAA 90 bp CCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATAGGGATCCACAAAGCTaGGACTATCCAGGGAATTCA +
Preference number: 5 (lower is better)
Translates to: PGNSTDRIAVRCWPGQQDRDPQS*DYPGNS
Trigger: TGAATTCCCTGGATAGTCCAAGCTTTGTGGATCCCT...ATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CAA 90 bp GGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATCCTAGGGATCCACAAAGCTaGGACTATCCAGGGAATTCA +
Preference number: 5 (lower is better)
Translates to: GNSTDRIAVRCWPGQQDPRDPQS*DYPGNS
Trigger: TGAATTCCCTGGATAGTCCAAGCTTTGTGGATCCCT...AGGATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CAA 90 bp CCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGACAGCAAGATTGTATTAGCCAGCTGTaGCCATGTGACGAATTACCC +
Preference number: 5 (lower is better)
Translates to: PGNSTDRIAVRCWPGQQDCISQL*PCDELP
Trigger: GGGTAATTCGTCACATGGCAACAGCTGGCTAATACA...ATCTTGCTGTCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
CDS-3UTR CAA 90 bp TTGGGGTGTTGGGATCCATTCACTGATTTGTGTGGGATCCAGTGGTTAAGACGTGGGGTGTGGATAATCTaGAATCTTGTGGTTAGGGTA +
Preference number: 5 (lower is better)
Translates to: LGCWDPFTDLCGIQWLRRGVWII*NLVVRV
Trigger: TACCCTAACCACAAGATTCAAGATTATCCACACCCC...ACGTCTTAACCACTGGATCCCACACAAATCAGTGAATGGATCCCAACACCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301454.9
ENST00000600682.5
CDS-3UTR CAA 90 bp TTGGACTATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCAGGAAGGGATCCACAAAGCTaGGACTATCCAGGGAATTCA +
Preference number: 5 (lower is better)
Translates to: LDYPGNSTDRIAVRCWPGRDPQS*DYPGNS
Trigger: TGAATTCCCTGGATAGTCCAAGCTTTGTGGATCCCT...TCCTGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATAGTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
ENST00000601322.5
CDS-3UTR CAA 90 bp AGCTTGGACTATCCAGGGAATTCAACTGATAGAATTGCAGTGAGATGTTGGCCATGTATTAGCCAGCTGTaGCCATGTGACGAATTACCC +
Preference number: 5 (lower is better)
Translates to: SLDYPGNSTDRIAVRCWPCISQL*PCDELP
Trigger: GGGTAATTCGTCACATGGCAACAGCTGGCTAATACA...TGGCCAACATCTCACTGCAATTCTATCAGTTGAATTCCCTGGATAGTCCAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264088.8
ENST00000595810.5
ENST00000598704.5
CDS-3UTR CAA 90 bp CGTGATCAGTGTTTGAAGTATAAGAGTCTAAGATTCAGGATTCAGGTACTGGGAAACATGATGAAATCCTaGTGCCTGCATGCGGGTCCG +
Preference number: 5 (lower is better)
Translates to: RDQCLKYKSLRFRIQVLGNMMKS*CLHAGP
Trigger: CGGACCCGCATGCAGGCACAAGGATTTCATCATGTT...TCCCAGTACCTGAATCCTGAATCTTAGACTCTTATACTTCAAACACTGATCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598908.5
CDS-3UTR CAA 90 bp CGTGATCAGTGTTTGAAGTATAAGAGTCTAAGATTCAGGATTCAGGTACTGGGACCAAGACCGTGGTTTTaGAACGATTCTGTTCAGCCG +
Preference number: 5 (lower is better)
Translates to: RDQCLKYKSLRFRIQVLGPRPWF*NDSVQP
Trigger: CGGCTGAACAGAATCGTTCAAAAACCACGGTCTTGG...TCCCAGTACCTGAATCCTGAATCTTAGACTCTTATACTTCAAACACTGATCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264088.8
CDS CCA 72 bp GGGTCTGGGTTGCCCCCGCCCAGCCTGGCCAGCCCCTaGCGCAACTCGTGCACGTCCACGCGGCCATCCTTG +
Preference number: 6 (lower is better)
Translates to: GSGLPPPSLASP*RNSCTSTRPSL
Trigger: CAAGGATGGCCGCGTGGACGTGCACGAGTTGCGCCAGGGGCTGGCCAGGCTGGGCGGGGGCAACCCAGACCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
CDS CAA 90 bp CTGGCCAGCCCCTGGCGCAACTCGTGCACGTCCACGCGGCCATCCTaGTTACTGTCCAGCTCCTCGAACAGGCGACCCCAGCGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: LASPWRNSCTSTRPS*LLSSSSNRRPQRCR
Trigger: GCGGCAGCGCTGGGGTCGCCTGTTCGAGGAGCTGGACAGTAACAAGGATGGCCGCGTGGACGTGCACGAGTTGCGCCAGGGGCTGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
CDS GCA 72 bp GGCTGCTCATGGCATGACCACCGGCTTGTGCCTGCATaGGGGTCCGGACCAGGGCCAGCGGGTAACTGGCTA +
Preference number: 6 (lower is better)
Translates to: GCSWHDHRLVPA*GSGPGPAGNWL
Trigger: TAGCCAGTTACCCGCTGGCCCTGGTCCGGACCCGCATGCAGGCACAAGCCGGTGGTCATGCCATGAGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595810.5
CDS CAA 72 bp CCTCTCCATAAGGCTGCTCATGGCATGACCACCGGCTaGTGCCTGCATGCGGGTCCGGACCAGGGCCAGCGG +
Preference number: 6 (lower is better)
Translates to: PLHKAAHGMTTG*CLHAGPDQGQR
Trigger: CCGCTGGCCCTGGTCCGGACCCGCATGCAGGCACAAGCCGGTGGTCATGCCATGAGCAGCCTTATGGAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595810.5
CDS GCA 72 bp CTCCATAAGGCTGCTCATGGCATGACCACCGGCTTGTaGCTGCATGCGGGTCCGGACCAGGGCCAGCGGGTA +
Preference number: 6 (lower is better)
Translates to: LHKAAHGMTTGL*LHAGPDQGQRV
Trigger: TACCCGCTGGCCCTGGTCCGGACCCGCATGCAGGCACAAGCCGGTGGTCATGCCATGAGCAGCCTTATGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595810.5
CDS CAA 72 bp CCCTGGCGCAACTCGTGCACGTCCACGCGGCCATCCTaGTTACTGTCCAGCTCCTCGAACAGGCGACCCCAG +
Preference number: 6 (lower is better)
Translates to: PWRNSCTSTRPS*LLSSSSNRRPQ
Trigger: CTGGGGTCGCCTGTTCGAGGAGCTGGACAGTAACAAGGATGGCCGCGTGGACGTGCACGAGTTGCGCCAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
CDS CAA 90 bp CCACATGGTCCTCTCCATAAGGCTGCTCATGGCATGACCACCGGCTaGTGCCTGCATGCGGGTCCGGACCAGGGCCAGCGGGTAACTGGC +
Preference number: 6 (lower is better)
Translates to: PHGPLHKAAHGMTTG*CLHAGPDQGQRVTG
Trigger: GCCAGTTACCCGCTGGCCCTGGTCCGGACCCGCATGCAGGCACAAGCCGGTGGTCATGCCATGAGCAGCCTTATGGAGAGGACCATGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595810.5
CDS CAA 90 bp CCTCTCCGGCCTGTGAGCTCTATGAGGGTGGGGACCGTGTCCGTCTaGTACACTGACACATCTTGTGCCTGCATGCGGGTCCGGACCAGG +
Preference number: 6 (lower is better)
Translates to: PLRPVSSMRVGTVSV*YTDTSCACMRVRTR
Trigger: CCTGGTCCGGACCCGCATGCAGGCACAAGATGTGTCAGTGTACAAGACGGACACGGTCCCCACCCTCATAGAGCTCACAGGCCGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334510.9
CDS GCA 72 bp GAAATCGAGCCACTGTACTCCAGCCTTGTGCCTGCATaGGGGTCCGGACCAGGGCCAGCGGGTAACTGGCTA +
Preference number: 6 (lower is better)
Translates to: EIEPLYSSLVPA*GSGPGPAGNWL
Trigger: TAGCCAGTTACCCGCTGGCCCTGGTCCGGACCCGCATGCAGGCACAAGGCTGGAGTACAGTGGCTCGATTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000601760.1
CDS CAA 72 bp AGCTGGGAGGAGGCCTGCCGAGCCGGGTCGACCTGGTaGGCTGAAGGTGTAGACCCCAGCCATTCAGTCTTA +
Preference number: 6 (lower is better)
Translates to: SWEEACRAGSTW*AEGVDPSHSVL
Trigger: TAAGACTGAATGGCTGGGGTCTACACCTTCAGCCAACCAGGTCGACCCGGCTCGGCAGGCCTCCTCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597307.1
CDS TCA 72 bp TACCACATGGTCCTCTCCATAAGGCTGCTCATGGCATaGCCACCGGCTTGTGCCTGCATGCGGGTCCGGACC +
Preference number: 6 (lower is better)
Translates to: YHMVLSIRLLMA*PPACACMRVRT
Trigger: GGTCCGGACCCGCATGCAGGCACAAGCCGGTGGTCATGCCATGAGCAGCCTTATGGAGAGGACCATGTGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595810.5
CDS GCA 72 bp AGTGATCTGAAATCGAGCCACTGTACTCCAGCCTTGTaGCTGCATGCGGGTCCGGACCAGGGCCAGCGGGTA +
Preference number: 6 (lower is better)
Translates to: SDLKSSHCTPAL*LHAGPDQGQRV
Trigger: TACCCGCTGGCCCTGGTCCGGACCCGCATGCAGGCACAAGGCTGGAGTACAGTGGCTCGATTTCAGATCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264088.8
ENST00000601760.1
CDS GCA 72 bp GAGCCTGGGCAACATGATGAAATCCTTGTGCCTGCATaGGGGTCCGGACCAGGGCCAGCGGGTAACTGGCTA +
Preference number: 6 (lower is better)
Translates to: EPGQHDEILVPA*GSGPGPAGNWL
Trigger: TAGCCAGTTACCCGCTGGCCCTGGTCCGGACCCGCATGCAGGCACAAGGATTTCATCATGTTGCCCAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598908.5
CDS TCA 72 bp CTCTATGAGGGTGGGGACCGTGTCCGTCTTGTACACTaGCACATCTTGTGCCTGCATGCGGGTCCGGACCAG +
Preference number: 6 (lower is better)
Translates to: LYEGGDRVRLVH*HILCLHAGPDQ
Trigger: CTGGTCCGGACCCGCATGCAGGCACAAGATGTGTCAGTGTACAAGACGGACACGGTCCCCACCCTCATAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334510.9
CDS TCA 72 bp GGAGGAGGCCTGCCGAGCCGGGTCGACCTGGTTGGCTaGAGGTGTAGACCCCAGCCATTCAGTCTTAGATTT +
Preference number: 6 (lower is better)
Translates to: GGGLPSRVDLVG*RCRPQPFSLRF
Trigger: AAATCTAAGACTGAATGGCTGGGGTCTACACCTTCAGCCAACCAGGTCGACCCGGCTCGGCAGGCCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597307.1
CDS GCA 72 bp TTCGAGATGAGCCTGGGCAACATGATGAAATCCTTGTaGCTGCATGCGGGTCCGGACCAGGGCCAGCGGGTA +
Preference number: 6 (lower is better)
Translates to: FEMSLGNMMKSL*LHAGPDQGQRV
Trigger: TACCCGCTGGCCCTGGTCCGGACCCGCATGCAGGCACAAGGATTTCATCATGTTGCCCAGGCTCATCTCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598908.5
CDS CAA 90 bp CGGCCACCAGCTGTTTCCACCACATGCCCGTCAGCTTCTCTTGCTTaGAGAACTCGTCCGGCACTGTCAGGCACTCGCCAATGTCCAGGA +
Preference number: 6 (lower is better)
Translates to: RPPAVSTTCPSASLA*RTRPALSGTRQCPG
Trigger: TCCTGGACATTGGCGAGTGCCTGACAGTGCCGGACGAGTTCTCAAAGCAAGAGAAGCTGACGGGCATGTGGTGGAAACAGCTGGTGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
CDS CCA 72 bp ATAGCGGGAAAATTCCTCCAGGTCGAGCCCGCCATCTaGGTCAGCATCACCCTCAGAGGAGATACCCTCTCG +
Preference number: 6 (lower is better)
Translates to: IAGKFLQVEPAI*VSITLRGDTLS
Trigger: CGAGAGGGTATCTCCTCTGAGGGTGATGCTGACCCAGATGGCGGGCTCGACCTGGAGGAATTTTCCCGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597307.1
CDS CAA 72 bp CCTGTGAGCTCTATGAGGGTGGGGACCGTGTCCGTCTaGTACACTGACACATCTTGTGCCTGCATGCGGGTC +
Preference number: 6 (lower is better)
Translates to: PVSSMRVGTVSV*YTDTSCACMRV
Trigger: GACCCGCATGCAGGCACAAGATGTGTCAGTGTACAAGACGGACACGGTCCCCACCCTCATAGAGCTCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334510.9
CDS CCA 72 bp ATAGCGGGAAAATTCCTCCAGGTCGAGCCCGCCATCTaGGTCAGCATCACCCTCAGAGGAGATACCCTGTTG +
Preference number: 6 (lower is better)
Translates to: IAGKFLQVEPAI*VSITLRGDTLL
Trigger: CAACAGGGTATCTCCTCTGAGGGTGATGCTGACCCAGATGGCGGGCTCGACCTGGAGGAATTTTCCCGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
CDS TCA 72 bp TGTGACCATCCTGGTTCCGGTCAAGACTGTGAAACATaGGCAGCAGACGCTGTTCCCGCTCCTGCAGATAGC +
Preference number: 6 (lower is better)
Translates to: CDHPGSGQDCET*AADAVPAPADS
Trigger: GCTATCTGCAGGAGCGGGAACAGCGTCTGCTGCTCATGTTTCACAGTCTTGACCGGAACCAGGATGGTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
ENST00000597307.1
CDS CCA 72 bp CGCGTCTTCAGCACCTGGGGAGAACCTGGTTATCCCTaGAAAAGCTGTCCCACCAAATCGCTACATCCAGGA +
Preference number: 6 (lower is better)
Translates to: RVFSTWGEPGYP*KSCPTKSLHPG
Trigger: TCCTGGATGTAGCGATTTGGTGGGACAGCTTTTCCAGGGATAACCAGGTTCTCCCCAGGTGCTGAAGACGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597039.1
CDS TCA 72 bp TACCACATGGTCCTCTCCATAAGGCTGCTCATGGCATaGCCACCGGCTGTAATACCAGCTACTCTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: YHMVLSIRLLMA*PPAVIPATLEA
Trigger: AGCCTCCAGAGTAGCTGGTATTACAGCCGGTGGTCATGCCATGAGCAGCCTTATGGAGAGGACCATGTGGTA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601322.5
CDS GCA 72 bp CCGTCTCGGTCCATGCTGTGCAAAATTTTCTCAGCCTaGTCCAGCGAGATGGAAATGCCCAGAGCTCGGAAA +
Preference number: 6 (lower is better)
Translates to: PSRSMLCKIFSA*SSEMEMPRARK
Trigger: TTTCCGAGCTCTGGGCATTTCCATCTCGCTGGAGCAGGCTGAGAAAATTTTGCACAGCATGGACCGAGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
ENST00000597307.1
CDS CCA 72 bp GCAACAGGAAGTGGTCGCGCCATTCTTGCCAGTCAATaGTCATTGTGCCGTCTCGGTCCATGCTGTGCAAAA +
Preference number: 6 (lower is better)
Translates to: ATGSGRAILASQ*SLCRLGPCCAK
Trigger: TTTTGCACAGCATGGACCGAGACGGCACAATGACCATTGACTGGCAAGAATGGCGCGACCACTTCCTGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
ENST00000597307.1
CDS CAA 90 bp AGCCTGCTCCAGCGAGATGGAAATGCCCAGAGCTCGGAAACTCTGTaGGATCTCAGAGACATCAATGTGACCATCCTGGTTCCGGTCAAG +
Preference number: 6 (lower is better)
Translates to: SLLQRDGNAQSSETL*DLRDINVTILVPVK
Trigger: CTTGACCGGAACCAGGATGGTCACATTGATGTCTCTGAGATCCAACAGAGTTTCCGAGCTCTGGGCATTTCCATCTCGCTGGAGCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
ENST00000597307.1
CDS CAA 90 bp CTGGGTCAGCATCACCCTCAGAGGAGATACCCTCTCGAGTCGTCTTaGCCAAAACCCTATAAGGTAGGTGGTACTGGCGTTCGCACTTTG +
Preference number: 6 (lower is better)
Translates to: LGQHHPQRRYPLESS*PKPYKVGGTGVRTL
Trigger: CAAAGTGCGAACGCCAGTACCACCTACCTTATAGGGTTTTGGCAAAGACGACTCGAGAGGGTATCTCCTCTGAGGGTGATGCTGACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597307.1
CDS GCA 72 bp CAGAAATACAGCACGTCCTCCACATTTTCCAGCGAATaGAACAGGAAGTGGTCGCGCCATTCTTGCCAGTCA +
Preference number: 6 (lower is better)
Translates to: QKYSTSSTFSSE*NRKWSRHSCQS
Trigger: TGACTGGCAAGAATGGCGCGACCACTTCCTGTTGCATTCGCTGGAAAATGTGGAGGACGTGCTGTATTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
ENST00000597307.1
CDS CAA 72 bp CATCACCCTCAGAGGAGATACCCTCTCGAGTCGTCTTaGCCAAAACCCTATAAGGTAGGTGGTACTGGCGTT +
Preference number: 6 (lower is better)
Translates to: HHPQRRYPLESS*PKPYKVGGTGV
Trigger: AACGCCAGTACCACCTACCTTATAGGGTTTTGGCAAAGACGACTCGAGAGGGTATCTCCTCTGAGGGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597307.1
CDS GCA 72 bp GCAAAATTTTCTCAGCCTGCTCCAGCGAGATGGAAATaGCCAGAGCTCGGAAACTCTGTTGGATCTCAGAGA +
Preference number: 6 (lower is better)
Translates to: AKFSQPAPARWK*PELGNSVGSQR
Trigger: TCTCTGAGATCCAACAGAGTTTCCGAGCTCTGGGCATTTCCATCTCGCTGGAGCAGGCTGAGAAAATTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
ENST00000597307.1
CDS CCA 72 bp TGCTGTGCAAAATTTTCTCAGCCTGCTCCAGCGAGATaGAAATGCCCAGAGCTCGGAAACTCTGTTGGATCT +
Preference number: 6 (lower is better)
Translates to: CCAKFSQPAPAR*KCPELGNSVGS
Trigger: AGATCCAACAGAGTTTCCGAGCTCTGGGCATTTCCATCTCGCTGGAGCAGGCTGAGAAAATTTTGCACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
ENST00000597307.1
CDS CAA 72 bp CAGCGAGATGGAAATGCCCAGAGCTCGGAAACTCTGTaGGATCTCAGAGACATCAATGTGACCATCCTGGTT +
Preference number: 6 (lower is better)
Translates to: QRDGNAQSSETL*DLRDINVTILV
Trigger: AACCAGGATGGTCACATTGATGTCTCTGAGATCCAACAGAGTTTCCGAGCTCTGGGCATTTCCATCTCGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264088.8
ENST00000301454.9
ENST00000334510.9
ENST00000595267.1
ENST00000597307.1
CDS CAA 72 bp AAACCCTATAAGGTAGGTGGTACTGGCGTTCGCACTTaGCAGATAAGGAAGCGGAGGTTAAGTCATTCTCCC +
Preference number: 6 (lower is better)
Translates to: KPYKVGGTGVRT*QIRKRRLSHSP
Trigger: GGGAGAATGACTTAACCTCCGCTTCCTTATCTGCAAAGTGCGAACGCCAGTACCACCTACCTTATAGGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597307.1