RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC25A22 (Homo sapiens)

Ensembl gene IDs: ENSG00000177542

Ensembl transcript IDs: ENST00000320230.9, ENST00000456706.6, ENST00000481290.5, ENST00000524891.5, ENST00000525010.5, ENST00000525644.3, ENST00000526152.5, ENST00000527127.5, ENST00000527723.5, ENST00000527734.5, ENST00000528606.5, ENST00000528936.5, ENST00000529066.5, ENST00000529351.5, ENST00000530360.2, ENST00000531214.5, ENST00000531437.5, ENST00000531514.5, ENST00000531534.5, ENST00000532361.5, ENST00000532459.5, ENST00000532484.5, ENST00000533385.5, ENST00000625316.2, ENST00000625419.2, ENST00000625752.2, ENST00000627843.2, ENST00000628067.3, ENST00000629602.1, ENST00000629634.2, ENST00000630809.2

Found 360 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCACCCTCAGGCTCCACACTGGTCCCAATGCCCGCCCTGCTCCCTaGCCAATCCCAGGCCAGGGTGGAGGACTCAGGAGAGACCAAGCT +
Preference number: 1 (lower is better)
Translates to: GTLRLHTGPNARPAP*PIPGQGGGLRRDQA
Trigger: AGCTTGGTCTCTCCTGAGTCCTCCACCCTGGCCTGGGATTGGCCAGGGAGCAGGGCGGGCATTGGGACCAGTGTGGAGCCTGAGGGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR GCA 90 bp CCCCAGTCCTCTTGCAAGGCTGGCCAGGGAGGCAGAGTCAAGTCCTaGCAAGGCGACAAGAGCGGCTGGGGAAGGACGGAAGGGCTGGAG +
Preference number: 1 (lower is better)
Translates to: PQSSCKAGQGGRVKS*QGDKSGWGRTEGLE
Trigger: CTCCAGCCCTTCCGTCCTTCCCCAGCCGCTCTTGTCGCCTTGGCAGGACTTGACTCTGCCTCCCTGGCCAGCCTTGCAAGAGGACTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR GCA 90 bp CCCATCCCCAAGGGCCAGGCCAGATCCCCACAACACACACACGCATaGACACACACATACACACACACATGCACACAGACCTCACAATCT +
Preference number: 1 (lower is better)
Translates to: PIPKGQARSPQHTHA*THTYTHTCTQTSQS
Trigger: AGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGTGTGTGCATGCGTGTGTGTGTTGTGGGGATCTGGCCTGGCCCTTGGGGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp AGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCAGGGATCGCCCGGTGGCAGGGGTGTGCACCACCTATGTaGACCCTGCACCCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: RAGQGELRLTAGIARWQGCAPPM*TLHPAP
Trigger: GGGGGCAGGGTGCAGGGTCCACATAGGTGGTGCACA...CCCCTGCCACCGGGCGATCCCTGCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR GCA 90 bp AGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCAGGGATCGCCCGGTGGCAGGGGGGCAGAGTCAAGTCCTaGCAAGGCGACAAGAGCGGC +
Preference number: 2 (lower is better)
Translates to: RAGQGELRLTAGIARWQGGRVKS*QGDKSG
Trigger: GCCGCTCTTGTCGCCTTGGCAGGACTTGACTCTGCC...CCCCTGCCACCGGGCGATCCCTGCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp AGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCAGGGATCGCCCGGTGGCAGGGGCAGAAAGTCCCACAGTaGGTGGCGGGCTTGCCCCAA +
Preference number: 2 (lower is better)
Translates to: RAGQGELRLTAGIARWQGQKVPQ*VAGLPQ
Trigger: TTGGGGCAAGCCCGCCACCCACTGTGGGACTTTCTG...CCCCTGCCACCGGGCGATCCCTGCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR GCA 90 bp CCCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACCGTCCTGGGCTAGCTaGCTGGCTCCAGCCCCACAC +
Preference number: 2 (lower is better)
Translates to: PTVGGGLAPRVRPQGNPSPSWAS*LAPAPH
Trigger: GTGTGGGGCTGGAGCCAGGCAGCTAGCCCAGGACGG...TGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR GCA 90 bp CAGAGAGGGCAGGAGACCCCAGTCCTCTTGCAAGGCTGGCCAGGGAGGCAGAGTCCGTCCTGGGCTAGCTaGCTGGCTCCAGCCCCACAC +
Preference number: 2 (lower is better)
Translates to: QRGQETPVLLQGWPGRQSPSWAS*LAPAPH
Trigger: GTGTGGGGCTGGAGCCAGGCAGCTAGCCCAGGACGG...ACTCTGCCTCCCTGGCCAGCCTTGCAAGAGGACTGGGGTCTCCTGCCCTCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCTGCCGACGGGAGGGCTaGGGAGGGGTCTTCCCTTGC +
Preference number: 2 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSCRREG*GGVFPC
Trigger: GCAAGGGAAGACCCCTCCCCAGCCCTCCCGTCGGCA...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp CAGAGAGGGCAGGAGACCCCAGTCCTCTTGCAAGGCTGGCCAGGGAGGCAGAGTGGTGGACTGGGGGTATaGTCCAGCCTGCCCGGCCCA +
Preference number: 2 (lower is better)
Translates to: QRGQETPVLLQGWPGRQSGGLGV*SSLPGP
Trigger: TGGGCCGGGCAGGCTGGACCATACCCCCAGTCCACC...ACTCTGCCTCCCTGGCCAGCCTTGCAAGAGGACTGGGGTCTCCTGCCCTCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp CCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACGGCGACAAGAGCGGCTaGGGAAGGACGGAAGGGCTG +
Preference number: 2 (lower is better)
Translates to: PQWVAGLPQESDLRATPHGDKSG*GRTEGL
Trigger: CAGCCCTTCCGTCCTTCCCCAGCCGCTCTTGTCGCC...GTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR GCA 90 bp CAGAGAGGGCAGGAGACCCCAGTCCTCTTGCAAGGCTGGCCAGGGAGGCAGAGTCACCTATGTGGACCCTaGACCCTGCCCCCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: QRGQETPVLLQGWPGRQSHLCGP*TLPPAA
Trigger: GGCAGCAGGGGGCAGGGTGCAGGGTCCACATAGGTG...ACTCTGCCTCCCTGGCCAGCCTTGCAAGAGGACTGGGGTCTCCTGCCCTCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR GCA 90 bp GCCAGGATCTTCCTCTGGGCGGCAATGCGCCCTGCATCCTGCAGCTGGATCTTCCGATCACCTGGCAGGTaGCAGCCCCACAGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: ARIFLWAAMRPASCSWIFRSPGR*QPHSPP
Trigger: TGGCGGGCTGTGGGGCTGGCACCTGCCAGGTGATCG...GAAGATCCAGCTGCAGGATGCAGGGCGCATTGCCGCCCAGAGGAAGATCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529351.5
3UTR-3UTR CCA 90 bp CCCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCATCCCTTGCTCCGTCCTaGGCTAGCTGCCTGGCTCCA +
Preference number: 2 (lower is better)
Translates to: PTVGGGLAPRVRPQGNPSSLAPS*ASCLAP
Trigger: TGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGA...TGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTTGCCGACGGGAGGGCTaGGGAGGGGTCTTCCCTTGC +
Preference number: 2 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLCRREG*GGVFPC
Trigger: GCAAGGGAAGACCCCTCCCCAGCCCTCCCGTCGGCA...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTGGTGGACTGGGGGTATaGTCCAGCCTGCCCGGCCCA +
Preference number: 2 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLGGLGV*SSLPGP
Trigger: TGGGCCGGGCAGGCTGGACCATACCCCCAGTCCACC...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp CCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACGGGCCAGGATGGCTGTaGAGACTGGAGCTGGTGGAC +
Preference number: 2 (lower is better)
Translates to: PQWVAGLPQESDLRATPHGPGWL*RLELVD
Trigger: GTCCACCAGCTCCAGTCTCCACAGCCATCCTGGCCC...GTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR GCA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGCTGCACCCTGCCCCCTaGTGCCCCTGCCGACGGGAG +
Preference number: 2 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGLHPAP*CPCRRE
Trigger: CTCCCGTCGGCAGGGGCAGCAGGGGGCAGGGTGCAG...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp CCCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCATGTGGAGACTGGAGCTaGTGGACTGGGGGTATGGTC +
Preference number: 2 (lower is better)
Translates to: PTVGGGLAPRVRPQGNPSCGDWS*WTGGMV
Trigger: GACCATACCCCCAGTCCACCAGCTCCAGTCTCCACA...TGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCAAGTCCCACAGTGGGTaGCGGGCTTGCCCCAAGAGT +
Preference number: 2 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSKSHSG*RACPKS
Trigger: ACTCTTGGGGCAAGCCCGCCACCCACTGTGGGACTT...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCGGGGTCAACAGAGCCTaGGGCACACACAGCACACAG +
Preference number: 2 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSGVNRA*GTHSTQ
Trigger: CTGTGTGCTGTGTGTGCCCCAGGCTCTGTTGACCCC...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGGGCGACAAGAGCGGCTaGGGAAGGACGGAAGGGCTG +
Preference number: 2 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGGDKSG*GRTEGL
Trigger: CAGCCCTTCCGTCCTTCCCCAGCCGCTCTTGTCGCC...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR GCA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGTGGTCAGGGGCCTTATaGCCGGAGGCGGGAAGGATG +
Preference number: 2 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGWSGAL*PEAGRM
Trigger: CATCCTTCCCGCCTCCGGGCATAAGGCCCCTGACCA...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGCTGGAGCTGGTGGACTaGGGGTATGGTCCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGLELVD*GYGPAC
Trigger: GCAGGCTGGACCATACCCCCAGTCCACCAGCTCCAG...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGCGGAGGCGGGAAGGATaGGGCTTCTGCAGTGTACCC +
Preference number: 2 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGRRREG*GFCSVP
Trigger: GGGTACACTGCAGAAGCCCCATCCTTCCCGCCTCCG...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGCTGGAGCTGGTGGACTaGGGGTATGGTCCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGLELVD*GYGPAC
Trigger: GCAGGCTGGACCATACCCCCAGTCCACCAGCTCCAG...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGCAGAAAGTCCCACAGTaGGTGGCGGGCTTGCCCCAA +
Preference number: 2 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGQKVPQ*VAGLPQ
Trigger: TTGGGGCAAGCCCGCCACCCACTGTGGGACTTTCTG...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGTGTGGAGACTGGAGCTaGTGGACTGGGGGTATGGTC +
Preference number: 2 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGCGDWS*WTGGMV
Trigger: GACCATACCCCCAGTCCACCAGCTCCAGTCTCCACA...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR GCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCCTGCACCCTGCCCCCTaGTGCCCCTGCCGACGGGAG +
Preference number: 2 (lower is better)
Translates to: FCIFYINETLIPTVQAAPLHPAP*CPCRRE
Trigger: CTCCCGTCGGCAGGGGCAGCAGGGGGCAGGGTGCAG...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
3UTR-3UTR GCA 90 bp GACTCAGGAGAGACCAAGCTGGGTAAGTTAGTTCCTGGACGGGGTCAACAGAGCGGCAGAGTCAAGTCCTaGCAAGGCGACAAGAGCGGC +
Preference number: 2 (lower is better)
Translates to: DSGETKLGKLVPGRGQQSGRVKS*QGDKSG
Trigger: GCCGCTCTTGTCGCCTTGGCAGGACTTGACTCTGCC...GCTCTGTTGACCCCGTCCAGGAACTAACTTACCCAGCTTGGTCTCTCCTGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR GCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCCCGTCCTGGGCTAGCTaGCTGGCTCCAGCCCCACAC +
Preference number: 2 (lower is better)
Translates to: FCIFYINETLIPTVQAAPPSWAS*LAPAPH
Trigger: GTGTGGGGCTGGAGCCAGGCAGCTAGCCCAGGACGG...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
3UTR-3UTR CCA 90 bp GACTCAGGAGAGACCAAGCTGGGTAAGTTAGTTCCTGGACGGGGTCAACAGAGCGGGCAACCCCTCACTTaGGATTCCTGGCTCAACAGA +
Preference number: 2 (lower is better)
Translates to: DSGETKLGKLVPGRGQQSGQPLT*DSWLNR
Trigger: TCTGTTGAGCCAGGAATCCCAAGTGAGGGGTTGCCC...GCTCTGTTGACCCCGTCCAGGAACTAACTTACCCAGCTTGGTCTCTCCTGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR GCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCCACCTATGTGGACCCTaGACCCTGCCCCCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: FCIFYINETLIPTVQAAPHLCGP*TLPPAA
Trigger: GGCAGCAGGGGGCAGGGTGCAGGGTCCACATAGGTG...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
3UTR-3UTR TCA 90 bp CAGAGAGGGCAGGAGACCCCAGTCCTCTTGCAAGGCTGGCCAGGGAGGCAGAGTCATTTTCTACATAAATaGGACATTGATCCCAACGGT +
Preference number: 2 (lower is better)
Translates to: QRGQETPVLLQGWPGRQSHFLHK*DIDPNG
Trigger: ACCGTTGGGATCAATGTCTCATTTATGTAGAAAATG...ACTCTGCCTCCCTGGCCAGCCTTGCAAGAGGACTGGGGTCTCCTGCCCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCTCCCTTGCTCCGTCCTaGGCTAGCTGCCTGGCTCCA +
Preference number: 2 (lower is better)
Translates to: FCIFYINETLIPTVQAAPSLAPS*ASCLAP
Trigger: TGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGA...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
3UTR-3UTR TCA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGCATTTTCTACATAAATaGGACATTGATCCCAACGGT +
Preference number: 2 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGHFLHK*DIDPNG
Trigger: ACCGTTGGGATCAATGTCTCATTTATGTAGAAAATG...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR CCA 72 bp GCCTGTGTGGGCCAGGATGGCTGTGGAGACTGGAGCTaGTGGACTGGGGGTATGGTCCAGCCTGCCCGGCCC +
Preference number: 3 (lower is better)
Translates to: ACVGQDGCGDWS*WTGGMVQPARP
Trigger: GGGCCGGGCAGGCTGGACCATACCCCCAGTCCACCAGCTCCAGTCTCCACAGCCATCCTGGCCCACACAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CAA 90 bp AGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCAGGGATCGCCCGGTGGCAGGGGGGGCTGGAGAGCCGCTaGGGTCCAGCAGATTCAATA +
Preference number: 3 (lower is better)
Translates to: RAGQGELRLTAGIARWQGGLESR*GPADSI
Trigger: TATTGAATCTGCTGGACCCAAGCGGCTCTCCAGCCC...CCCCTGCCACCGGGCGATCCCTGCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CAA 90 bp CCCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCAGAGACCCCAGTCCTCTaGCAAGGCTGGCCAGGGAGG +
Preference number: 3 (lower is better)
Translates to: PTVGGGLAPRVRPQGNPSETPVL*QGWPGR
Trigger: CCTCCCTGGCCAGCCTTGCAAGAGGACTGGGGTCTC...TGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR GCA 72 bp GAGCCCACCAGAAAGTCCCACAGTGGGTGGCGGGCTTaGCCCAAGAGTCAGACCTCAGGGCAACCCCTCACT +
Preference number: 3 (lower is better)
Translates to: EPTRKSHSGWRA*PKSQTSGQPLT
Trigger: AGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGGGACTTTCTGGTGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CAA 90 bp CCCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCAGGGCTGGAGAGCCGCTaGGGTCCAGCAGATTCAATA +
Preference number: 3 (lower is better)
Translates to: PTVGGGLAPRVRPQGNPSGLESR*GPADSI
Trigger: TATTGAATCTGCTGGACCCAAGCGGCTCTCCAGCCC...TGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CAA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGGAGACCCCAGTCCTCTaGCAAGGCTGGCCAGGGAGG +
Preference number: 3 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGETPVL*QGWPGR
Trigger: CCTCCCTGGCCAGCCTTGCAAGAGGACTGGGGTCTC...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR-3UTR CAA 90 bp CCCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCATACATAAATGAGACATaGATCCCAACGGTGCAGGCA +
Preference number: 3 (lower is better)
Translates to: PTVGGGLAPRVRPQGNPSYINET*IPTVQA
Trigger: TGCCTGCACCGTTGGGATCAATGTCTCATTTATGTA...TGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGCTGCACCCTGCCCCCTaGTGCCCCTGCCGACGGGAG +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQLHPAP*CPCRRE
Trigger: CTCCCGTCGGCAGGGGCAGCAGGGGGCAGGGTGCAG...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGAGGTCGCGGGTCAGCTaGGTGGCCGTGGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQRSRVS*VAVGRG
Trigger: CCCTCGGCCCACGGCCACCCAGCTGACCCGCGACCT...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR TCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGAGGTGGAGGAGGCCTTaGGGGAGGGTGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQRWRRP*GRVGPR
Trigger: CCTGGGTCCCACCCTCCCTCAAGGCCTCCTCCACCT...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR TCA 90 bp AGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCAGGGATCGCCCGGTGGCAGGGGTGGGAAACACGCAGGTaGCACCGATCAGCCCGGCGA +
Preference number: 4 (lower is better)
Translates to: RAGQGELRLTAGIARWQGWETRR*HRSARR
Trigger: TCGCCGGGCTGATCGGTGTCACCTGCGTGTTTCCCA...CCCCTGCCACCGGGCGATCCCTGCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGCCACATCACAGGGGTTaGCGGCCACAGCGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQPHHRG*RPQRRH
Trigger: GTGCCGCCGCTGTGGCCGTCAACCCCTGTGATGTGG...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp AGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCAGGGATCGCCCGGTGGCAGGGGCAGCTCCCCGGTACATaGCGAAGTAGCCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: RAGQGELRLTAGIARWQGQLPGT*RSSPRS
Trigger: GCTCCGAGGGCTACTTCGGCATGTACCGGGGAGCTG...CCCCTGCCACCGGGCGATCCCTGCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGGCCGAGGGGCCCTCGTaGCGCAGGATCTTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQAEGPS*RRIFLA
Trigger: TGCCAGGAAGATCCTGCGGCACGAGGGCCCCTCGGC...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGTGCCGACGGGAGGGCTaGGGAGGGGTCTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQCRREG*GGVFPC
Trigger: GCAAGGGAAGACCCCTCCCCAGCCCTCCCGTCGGCA...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGCACCTATGTGGACCCTaGACCCTGCCCCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQHLCGP*TLPPAA
Trigger: GGCAGCAGGGGGCAGGGTGCAGGGTCCACATAGGTG...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGGTGAACTCCCACGTGTaGGTCCCACACGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQVNSHV*VPHGSA
Trigger: GGCCGACCCGTGTGGGACGCACACGTGGGAGTTCAC...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531214.5
CDS-3UTR TCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGTCGTTGACGCCTCGCTaGAGTGACTGGAGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQSLTPR*SDWSRV
Trigger: GACGCGGCTCCAGTCACTTCAGCGAGGCGTCAACGA...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR TCA 90 bp AGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCAGGGATCGCCCGGTGGCAGGGGGCCTTATGCAGAGGCTaGAAAAGGAGGGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RAGQGELRLTAGIARWQGALCRG*KRRVGP
Trigger: AGGGCCCACCCTCCTTTTTCAGCCTCTGCATAAGGC...CCCCTGCCACCGGGCGATCCCTGCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGACGCGCTGGCCGTTCTaGTGGTTCTGCAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQTRWPF*WFCSLV
Trigger: GACCAGGCTGCAGAACCAGCAGAACGGCCAGCGCGT...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp CCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACCCGTCCTGGGCTAGCTaGCTGGCTCCAGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: PQWVAGLPQESDLRATPHPSWAS*LAPAPH
Trigger: GTGTGGGGCTGGAGCCAGGCAGCTAGCCCAGGACGG...GTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGGTGGTCACGATCACCTaGCAGGTGCCAGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQVVTIT*QVPAPQ
Trigger: CTGTGGGGCTGGCACCTGCCAGGTGATCGTGACCAC...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGGCCAGGATCTTCCTCTaGGCGGCAATGCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQARIFL*AAMRPA
Trigger: TGCAGGGCGCATTGCCGCCCAGAGGAAGATCCTGGC...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp AGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCAGGGATCGCCCGGTGGCAGGGGGCTGAAAAAGGAGGGTaGGCCCTGAGAGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: RAGQGELRLTAGIARWQGAEKGG*ALRGLG
Trigger: CCCAAGTCCTCTCAGGGCCCACCCTCCTTTTTCAGC...CCCCTGCCACCGGGCGATCCCTGCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GCAGGTGCCAGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGGCTCCGTCCTCCGCCTaGCCACCGCGACTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: AGASPTARQHLFKQGQLLAPSSA*PPRLRP
Trigger: TGGCCGGAGTCGCGGTGGCCAGGCGGAGGACGGAGC...CAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGCACCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR TCA 90 bp CAGAGAGGGCAGGAGACCCCAGTCCTCTTGCAAGGCTGGCCAGGGAGGCAGAGTCGAAAAGGGGCGCGATaGCCAGCGCGCGGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: QRGQETPVLLQGWPGRQSRKGAR*PARGSR
Trigger: CCTACTGCCGCGCGCTGGTCATCGCGCCCCTTTTCG...ACTCTGCCTCCCTGGCCAGCCTTGCAAGAGGACTGGGGTCTCCTGCCCTCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGCAGCTTCCAAGGTTCTaGTGTGACGGGAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQQLPRF*CDGRGS
Trigger: GCTGCCCCTCCCGTCACATCAGAACCTTGGAAGCTG...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTCCCCGCTCCGCCACCTaGCCGCTGGTCCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLPRSAT*PLVLLS
Trigger: TGAGAGCAGGACCAGCGGGCAGGTGGCGGAGCGGGG...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320230.9
CDS-3UTR GCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGCCGTTCTGCTGGTTCTaGAGCCTGGTCTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQPFCWF*SLVLAR
Trigger: CCTGGCCAAGACCAGGCTGCAGAACCAGCAGAACGG...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGGGCGGCAATGCGCCCTaGATCCTGCAGCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQGGNAP*ILQLDL
Trigger: AAGATCCAGCTGCAGGATGCAGGGCGCATTGCCGCC...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGTGTAGAGACCGGCAATaGCACGGCTCCGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQCRDRQ*HGSAAG
Trigger: ACCTGCTGCGGAGCCGTGGCATTGCCGGTCTCTACA...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp CCCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACACCTATGTGGACCCTaGACCCTGCCCCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PTVGGGLAPRVRPQGNPSHLCGP*TLPPAA
Trigger: GGCAGCAGGGGGCAGGGTGCAGGGTCCACATAGGTG...TGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp CCCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCATCCCAATGCCCGCCCTaGTCCCTGGCCAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: PTVGGGLAPRVRPQGNPSSQCPP*SLANPR
Trigger: CCTGGGATTGGCCAGGGAGCAGGGCGGGCATTGGGA...TGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp GCCAGGATCTTCCTCTGGGCGGCAATGCGCCCTGCATCCTGCAGCTGGATCTTCAGGCCCCTGCCCTACTaGTGGGGCTCAGCCGACCGC +
Preference number: 4 (lower is better)
Translates to: ARIFLWAAMRPASCSWIFRPLPY*WGSADR
Trigger: GCGGTCGGCTGAGCCCCAGCAGTAGGGCAGGGGCCT...GAAGATCCAGCTGCAGGATGCAGGGCGCATTGCCGCCCAGAGGAAGATCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR CCA 90 bp CCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTCGGCTTTCCAGGGCTaGGCCATCCACCACCGACCC +
Preference number: 4 (lower is better)
Translates to: PQWVAGLPQESDLRATPHSAFQG*AIHHRP
Trigger: GGGTCGGTGGTGGATGGCCCAGCCCTGGAAAGCCGA...GTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320230.9
CDS-3UTR CCA 90 bp CCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACGCCGGGCGGCCCAGCTaGTTCAGGTTGGCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: PQWVAGLPQESDLRATPHAGRPS*FRLAKS
Trigger: GCTCTTTGCCAACCTGAACCAGCTGGGCCGCCCGGC...GTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGGCCGCAGGATCTTCCTaGCACAGTCCAGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQAAGSS*HSPGSQ
Trigger: CTGGGATCCTGGACTGTGCCAGGAAGATCCTGCGGC...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp GCCAGGATCTTCCTCTGGGCGGCAATGCGCCCTGCATCCTGCAGCTGGATCTTCCCCCTGCCCTACTGCTaGGGCTCAGCCGACCGCTCC +
Preference number: 4 (lower is better)
Translates to: ARIFLWAAMRPASCSWIFPLPYC*GSADRS
Trigger: GGAGCGGTCGGCTGAGCCCCAGCAGTAGGGCAGGGG...GAAGATCCAGCTGCAGGATGCAGGGCGCATTGCCGCCCAGAGGAAGATCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR TCA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTCCACATCACAGGGGTTaGCGGCCACAGCGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLPHHRG*RPQRRH
Trigger: GTGCCGCCGCTGTGGCCGTCAACCCCTGTGATGTGG...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp CCCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCATCGTTGACGCCTCGCTaGAGTGACTGGAGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: PTVGGGLAPRVRPQGNPSSLTPR*SDWSRV
Trigger: GACGCGGCTCCAGTCACTTCAGCGAGGCGTCAACGA...TGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTCGATCACCTGGCAGGTaGCAGCCCCACAGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLRSPGR*QPHSPP
Trigger: TGGCGGGCTGTGGGGCTGGCACCTGCCAGGTGATCG...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTGCCGAGGGGCCCTCGTaGCGCAGGATCTTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLAEGPS*RRIFLA
Trigger: TGCCAGGAAGATCCTGCGGCACGAGGGCCCCTCGGC...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGGAAGTAGACCACCTGTaGGATGCCGAAAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQEVDHL*DAEKGR
Trigger: GCGCCCCTTTTCGGCATCGCACAGGTGGTCTACTTC...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGGTCCTCTTGGGGCGGTaGTTTCTATCCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQVLLGR*FLSCWL
Trigger: CAGCCAGCAGGATAGAAAGCACCGCCCCAAGAGGAC...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531214.5
CDS-3UTR CCA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGAGGTCGCGGGTCAGCTaGGTGGCCGTGGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGRSRVS*VAVGRG
Trigger: CCCTCGGCCCACGGCCACCCAGCTGACCCGCGACCT...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp CCCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTGGAGCTGGTGGACTaGGGGTATGGTCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PTVGGGLAPRVRPQGNPSLELVD*GYGPAC
Trigger: GCAGGCTGGACCATACCCCCAGTCCACCAGCTCCAG...TGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp CCCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCAACAGACCTCACAATCTaGGCCCCAGCCTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PTVGGGLAPRVRPQGNPSTDLTI*APAWGG
Trigger: CCCACCCCAGGCTGGGGCCCAGATTGTGAGGTCTGT...TGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGCTGTCCCCGTCCTCTTaGGGCGGTGCTTTCTATCCT +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQLSPSS*GGAFYP
Trigger: AGGATAGAAAGCACCGCCCCAAGAGGACGGGGACAG...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531214.5
3UTR CAA 72 bp GGAGCCCACCAGAAAGTCCCACAGTGGGTGGCGGGCTaGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCAC +
Preference number: 4 (lower is better)
Translates to: GAHQKVPQWVAG*PQESDLRATPH
Trigger: GTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGGGACTTTCTGGTGGGCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp GCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAAGGTGGAGGAGGCCTTaGGGGAGGGTGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: APQPASISLSRVSFCPSLRWRRP*GRVGPR
Trigger: CCTGGGTCCCACCCTCCCTCAAGGCCTCCTCCACCT...TAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR TCA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCTGGGAAACACGCAGGTaGCACCGATCAGCCCGGCGA +
Preference number: 4 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSWETRR*HRSARR
Trigger: TCGCCGGGCTGATCGGTGTCACCTGCGTGTTTCCCA...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp CCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTGGCCTTCTCGGGGGTaGCGAGGGTCAAGTTCACAG +
Preference number: 4 (lower is better)
Translates to: PQWVAGLPQESDLRATPHWPSRG*RGSSSQ
Trigger: CTGTGAACTTGACCCTCGTCACCCCCGAGAAGGCCA...GTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCGACGCCTCGCTGAAGTaGCTGGAGCCGCGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSDASLK*LEPRLH
Trigger: GTGAAGACGCGGCTCCAGTCACTTCAGCGAGGCGTC...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp CCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTCCAAGGTTCTGATGTaGCGGGAGGGGCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PQWVAGLPQESDLRATPHSKVLM*REGQLP
Trigger: TGGGAGCTGCCCCTCCCGTCACATCAGAACCTTGGA...GTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCACGCGCTGGCCGTTCTaGTGGTTCTGCAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSTRWPF*WFCSLV
Trigger: GACCAGGCTGCAGAACCAGCAGAACGGCCAGCGCGT...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp GCCAGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCACGCGCTGGCCGTTCTaGTGGTTCTGCAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: ASPTARQHLFKQGQLLPVTRWPF*WFCSLV
Trigger: GACCAGGCTGCAGAACCAGCAGAACGGCCAGCGCGT...GACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR GCA 90 bp GCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTACGATCACCTGGCAGGTaGCAGCCCCACAGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: APQPASISLSRVSFCPSLRSPGR*QPHSPP
Trigger: TGGCGGGCTGTGGGGCTGGCACCTGCCAGGTGATCG...TAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR GCA 90 bp CCCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCAGGCGGCAATGCGCCCTaGATCCTGCAGCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: PTVGGGLAPRVRPQGNPSGGNAP*ILQLDL
Trigger: AAGATCCAGCTGCAGGATGCAGGGCGCATTGCCGCC...TGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGTCTGCAGCCTGGTCTTaGCCAGGTCGATGGGAAACA +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQSAAWS*PGRWET
Trigger: TGTTTCCCATCGACCTGGCCAAGACCAGGCTGCAGA...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp CAGAGAGGGCAGGAGACCCCAGTCCTCTTGCAAGGCTGGCCAGGGAGGCAGAGTGTGGTCACGATCACCTaGCAGGTGCCAGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: QRGQETPVLLQGWPGRQSVVTIT*QVPAPQ
Trigger: CTGTGGGGCTGGCACCTGCCAGGTGATCGTGACCAC...ACTCTGCCTCCCTGGCCAGCCTTGCAAGAGGACTGGGGTCTCCTGCCCTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp CCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACGCATCTCCATGGGCGTaGTCACGATCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PQWVAGLPQESDLRATPHASPWA*SRSPGR
Trigger: CCTGCCAGGTGATCGTGACCACGCCCATGGAGATGC...GTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCGCCAGGATCTTCCTCTaGGCGGCAATGCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSARIFL*AAMRPA
Trigger: TGCAGGGCGCATTGCCGCCCAGAGGAAGATCCTGGC...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GCCAGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCGCCAGGATCTTCCTCTaGGCGGCAATGCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: ASPTARQHLFKQGQLLPVARIFL*AAMRPA
Trigger: TGCAGGGCGCATTGCCGCCCAGAGGAAGATCCTGGC...GACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR CCA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCTCCCTTGCTCCGTCCTaGGCTAGCTGCCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSSLAPS*ASCLAP
Trigger: TGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGA...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp CAGAGAGGGCAGGAGACCCCAGTCCTCTTGCAAGGCTGGCCAGGGAGGCAGAGTCTGGAGCTGGTGGACTaGGGGTATGGTCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: QRGQETPVLLQGWPGRQSLELVD*GYGPAC
Trigger: GCAGGCTGGACCATACCCCCAGTCCACCAGCTCCAG...ACTCTGCCTCCCTGGCCAGCCTTGCAAGAGGACTGGGGTCTCCTGCCCTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp CCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACAAGTCCCACAGTGGGTaGCGGGCTTGCCCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: PQWVAGLPQESDLRATPHKSHSG*RACPKS
Trigger: ACTCTTGGGGCAAGCCCGCCACCCACTGTGGGACTT...GTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp CAGAGAGGGCAGGAGACCCCAGTCCTCTTGCAAGGCTGGCCAGGGAGGCAGAGTCGGAGGCGGGAAGGATaGGGCTTCTGCAGTGTACCC +
Preference number: 4 (lower is better)
Translates to: QRGQETPVLLQGWPGRQSRRREG*GFCSVP
Trigger: GGGTACACTGCAGAAGCCCCATCCTTCCCGCCTCCG...ACTCTGCCTCCCTGGCCAGCCTTGCAAGAGGACTGGGGTCTCCTGCCCTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCACCAACACGATCACATaGCCAGGGCGGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSTNTIT*PGRGRE
Trigger: CTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGT...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GCCAGGATCTTCCTCTGGGCGGCAATGCGCCCTGCATCCTGCAGCTGGATCTTCTCGGCCTTTCTTCCTTaGGCTCGGGCCCCGGACACC +
Preference number: 4 (lower is better)
Translates to: ARIFLWAAMRPASCSWIFSAFLP*ARAPDT
Trigger: GGTGTCCGGGGCCCGAGCCCAAGGAAGAAAGGCCGA...GAAGATCCAGCTGCAGGATGCAGGGCGCATTGCCGCCCAGAGGAAGATCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR CCA 90 bp GCCAGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCAAAGGAGAAGCGGGTTaGGGGCCGCTCTCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: ASPTARQHLFKQGQLLPVKGEAG*GPLSAL
Trigger: GAGCGCAGAGAGCGGCCCCCAACCCGCTTCTCCTTT...GACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR TCA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGAGGTGGAGGAGGCCTTaGGGGAGGGTGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGRWRRP*GRVGPR
Trigger: CCTGGGTCCCACCCTCCCTCAAGGCCTCCTCCACCT...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp GCAGGTGCCAGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGTGGGAAACACGCAGGTaGCACCGATCAGCCCGGCGA +
Preference number: 4 (lower is better)
Translates to: AGASPTARQHLFKQGQLLWETRR*HRSARR
Trigger: TCGCCGGGCTGATCGGTGTCACCTGCGTGTTTCCCA...CAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGCACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR TCA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTGACGCCTCGCTGAAGTaGCTGGAGCCGCGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLDASLK*LEPRLH
Trigger: GTGAAGACGCGGCTCCAGTCACTTCAGCGAGGCGTC...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGCGAAAAGGGGCGCGATaGCCAGCGCGCGGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGRKGAR*PARGSR
Trigger: CCTACTGCCGCGCGCTGGTCATCGCGCCCCTTTTCG...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp GCCAGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCCGTTCTGCTGGTTCTaGAGCCTGGTCTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ASPTARQHLFKQGQLLPVPFCWF*SLVLAR
Trigger: CCTGGCCAAGACCAGGCTGCAGAACCAGCAGAACGG...GACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR GCA 90 bp GCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCTGCGATCACCTGGCAGGTaGCAGCCCCACAGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: ARQHLFKQGQLLPVLRELRSPGR*QPHSPP
Trigger: TGGCGGGCTGTGGGGCTGGCACCTGCCAGGTGATCG...CAGCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR GCA 90 bp GCCAGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCGGCGGCAATGCGCCCTaGATCCTGCAGCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: ASPTARQHLFKQGQLLPVGGNAP*ILQLDL
Trigger: AAGATCCAGCTGCAGGATGCAGGGCGCATTGCCGCC...GACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531514.5
CDS-3UTR GCA 90 bp GCCAGGATCTTCCTCTGGGCGGCAATGCGCCCTGCATCCTGCAGCTGGATCTTCTCCTCTGGGCGGCAATaGGCCCTGCATCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: ARIFLWAAMRPASCSWIFSSGRQ*ALHPAA
Trigger: AGCTGCAGGATGCAGGGCGCATTGCCGCCCAGAGGA...GAAGATCCAGCTGCAGGATGCAGGGCGCATTGCCGCCCAGAGGAAGATCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR GCA 90 bp CAGAGAGGGCAGGAGACCCCAGTCCTCTTGCAAGGCTGGCCAGGGAGGCAGAGTGCAGGGACTCCGCGATaGCCAGGAAGTAGACCACCT +
Preference number: 4 (lower is better)
Translates to: QRGQETPVLLQGWPGRQSAGTPR*PGSRPP
Trigger: AGGTGGTCTACTTCCTGGGCATCGCGGAGTCCCTGC...ACTCTGCCTCCCTGGCCAGCCTTGCAAGAGGACTGGGGTCTCCTGCCCTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp GCAGGTGCCAGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGGAAGGGGACTCCAACTaGGCGATGCCTCGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: AGASPTARQHLFKQGQLLEGDSN*AMPRPE
Trigger: CTCTGGCCGAGGCATCGCGCAGTTGGAGTCCCCTTC...CAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGCACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR CCA 90 bp CCCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCAGGCACTCACTCTGGATaGCTCTTCCACACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PTVGGGLAPRVRPQGNPSGTHSG*LFHTPA
Trigger: GGCTGGAGTGTGGAAGAGCCATCCAGAGTGAGTGCC...TGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320230.9
CDS-3UTR CCA 90 bp CAGAGAGGGCAGGAGACCCCAGTCCTCTTGCAAGGCTGGCCAGGGAGGCAGAGTCGCTGGCCGTTCTGCTaGTTCTGCAGCCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: QRGQETPVLLQGWPGRQSRWPFC*FCSLVL
Trigger: CAAGACCAGGCTGCAGAACCAGCAGAACGGCCAGCG...ACTCTGCCTCCCTGGCCAGCCTTGCAAGAGGACTGGGGTCTCCTGCCCTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GCCAGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCGCTGGCCGTTCTGCTaGTTCTGCAGCCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: ASPTARQHLFKQGQLLPVRWPFC*FCSLVL
Trigger: CAAGACCAGGCTGCAGAACCAGCAGAACGGCCAGCG...GACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CCA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCGCATCTCCATGGGCGTaGTCACGATCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSASPWA*SRSPGR
Trigger: CCTGCCAGGTGATCGTGACCACGCCCATGGAGATGC...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGCCAGCTGGTTCAGGTTaGCAAAGAGCGGGAAGTACA +
Preference number: 4 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQPAGSG*QRAGST
Trigger: TGTACTTCCCGCTCTTTGCCAACCTGAACCAGCTGG...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCGCCGCAGGATCTTCCTaGCACAGTCCAGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSAAGSS*HSPGSQ
Trigger: CTGGGATCCTGGACTGTGCCAGGAAGATCCTGCGGC...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTTCCCTTGCTCCGTCCTaGGCTAGCTGCCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLSLAPS*ASCLAP
Trigger: TGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGA...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTGGGCCAGGATGGCTGTaGAGACTGGAGCTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLGPGWL*RLELVD
Trigger: GTCCACCAGCTCCAGTCTCCACAGCCATCCTGGCCC...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp CAGAGAGGGCAGGAGACCCCAGTCCTCTTGCAAGGCTGGCCAGGGAGGCAGAGTGGGGTCAACAGAGCCTaGGGCACACACAGCACACAG +
Preference number: 4 (lower is better)
Translates to: QRGQETPVLLQGWPGRQSGVNRA*GTHSTQ
Trigger: CTGTGTGCTGTGTGTGCCCCAGGCTCTGTTGACCCC...ACTCTGCCTCCCTGGCCAGCCTTGCAAGAGGACTGGGGTCTCCTGCCCTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTGGAGGGCCCCGGTTTTaGGGACACAGCACCAGCACA +
Preference number: 4 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLGGPRF*GHSTST
Trigger: TGTGCTGGTGCTGTGTCCCCAAAACCGGGGCCCTCC...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCGCCTTATGCAGAGGCTaGAAAAGGAGGGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSALCRG*KRRVGP
Trigger: AGGGCCCACCCTCCTTTTTCAGCCTCTGCATAAGGC...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTCAGCTTCCAAGGTTCTaGTGTGACGGGAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLQLPRF*CDGRGS
Trigger: GCTGCCCCTCCCGTCACATCAGAACCTTGGAAGCTG...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGCCTGCCCGCTGGTCCTaGTCTCACTCTGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGPARWS*SHSAPG
Trigger: GCCTGGGGCAGAGTGAGAGCAGGACCAGCGGGCAGG...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320230.9
CDS-3UTR GCA 90 bp AGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTACGCGCTGGCCGTTCTaGTGGTTCTGCAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SPTARQHLFKQGQLLPVLTRWPF*WFCSLV
Trigger: GACCAGGCTGCAGAACCAGCAGAACGGCCAGCGCGT...AAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR GCA 90 bp GCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAACGCGCTGGCCGTTCTaGTGGTTCTGCAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: APQPASISLSRVSFCPSLTRWPF*WFCSLV
Trigger: GACCAGGCTGCAGAACCAGCAGAACGGCCAGCGCGT...TAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR GCA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTGGCAGAGTCAAGTCCTaGCAAGGCGACAAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLGRVKS*QGDKSG
Trigger: GCCGCTCTTGTCGCCTTGGCAGGACTTGACTCTGCC...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGCCAGGGCCACGCGGCTaGCTCACACCCACAGATCCT +
Preference number: 4 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGPGPRG*LTPTDP
Trigger: AGGATCTGTGGGTGTGAGCCAGCCGCGTGGCCCTGG...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320230.9
CDS-3UTR CCA 90 bp CCCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCATCTGCAGCCTGGTCTTaGCCAGGTCGATGGGAAACA +
Preference number: 4 (lower is better)
Translates to: PTVGGGLAPRVRPQGNPSSAAWS*PGRWET
Trigger: TGTTTCCCATCGACCTGGCCAAGACCAGGCTGCAGA...TGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGTGGTCACGATCACCTaGCAGGTGCCAGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: APQPASISLSRVSFCPSLVVTIT*QVPAPQ
Trigger: CTGTGGGGCTGGCACCTGCCAGGTGATCGTGACCAC...TAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CCA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCTGTGGAGACTGGAGCTaGTGGACTGGGGGTATGGTC +
Preference number: 4 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSCGDWS*WTGGMV
Trigger: GACCATACCCCCAGTCCACCAGCTCCAGTCTCCACA...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GCAGGTGCCAGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGTTCTATCCTGCTGGCTaGAGGGTCCCGGAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: AGASPTARQHLFKQGQLLFYPAG*RVPEGD
Trigger: GTCCCCTTCCGGGACCCTCCAGCCAGCAGGATAGAA...CAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGCACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR TCA 90 bp GCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCTGTGGGAAACACGCAGGTaGCACCGATCAGCCCGGCGA +
Preference number: 4 (lower is better)
Translates to: ARQHLFKQGQLLPVLRELWETRR*HRSARR
Trigger: TCGCCGGGCTGATCGGTGTCACCTGCGTGTTTCCCA...CAGCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR TCA 90 bp CAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCTGGGAAACACGCAGGTaGCACCGATCAGCCCGGCGA +
Preference number: 4 (lower is better)
Translates to: QPASISLSRVSFCPSLESWETRR*HRSARR
Trigger: TCGCCGGGCTGATCGGTGTCACCTGCGTGTTTCCCA...GCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR TCA 90 bp AGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTTGGCCTTCTCGGGGGTaGCGAGGGTCAAGTTCACAG +
Preference number: 4 (lower is better)
Translates to: SPTARQHLFKQGQLLPVLWPSRG*RGSSSQ
Trigger: CTGTGAACTTGACCCTCGTCACCCCCGAGAAGGCCA...AAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR GCA 90 bp CGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCTGATGCGATCACCTGGCAGGTaGCAGCCCCACAGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: RQHLFKQGQLLPVLRELMRSPGR*QPHSPP
Trigger: TGGCGGGCTGTGGGGCTGGCACCTGCCAGGTGATCG...CATCAGCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR GCA 90 bp CAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCCCTCACCCCGGTACATaGCGAAGTAGCCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: QPASISLSRVSFCPSLESPHPGT*RSSPRS
Trigger: GCTCCGAGGGCTACTTCGGCATGTACCGGGGTGAGG...GCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR GCA 90 bp AAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCTGATGTCGGAAGAAGTCGTTGCCGGCTCAGGCCCCTaGCCTACTGCTGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: KQGQLLPVLRELMSEEVVAGSGP*PTAGAQ
Trigger: CTGAGCCCCAGCAGTAGGGCAGGGGCCTGAGCCGGC...AACGACTTCTTCCGACATCAGCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR GCA 90 bp GCCAGGATCTTCCTCTGGGCGGCAATGCGCCCTGCATCCTGCAGCTGGATCTTCGTCCTCTTGGGGCGGTaGTTTCTATCCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ARIFLWAAMRPASCSWIFVLLGR*FLSCWL
Trigger: CAGCCAGCAGGATAGAAAGCACCGCCCCAAGAGGAC...GAAGATCCAGCTGCAGGATGCAGGGCGCATTGCCGCCCAGAGGAAGATCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR CCA 90 bp GCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTACGCTGGCCGTTCTGCTaGTTCTGCAGCCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: APQPASISLSRVSFCPSLRWPFC*FCSLVL
Trigger: CAAGACCAGGCTGCAGAACCAGCAGAACGGCCAGCG...TAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CCA 90 bp AGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTCTCGTGTACACGCGCTaGCCGTTCTGCTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SPTARQHLFKQGQLLPVLLVYTR*PFCWFC
Trigger: GCAGAACCAGCAGAACGGCCAGCGCGTGTACACGAG...AAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CCA 90 bp GCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCTGGTGGTCACGATCACCTaGCAGGTGCCAGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: ARQHLFKQGQLLPVLRELVVTIT*QVPAPQ
Trigger: CTGTGGGGCTGGCACCTGCCAGGTGATCGTGACCAC...CAGCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CCA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGGCCAGGATCTTCCTCTaGGCGGCAATGCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGARIFL*AAMRPA
Trigger: TGCAGGGCGCATTGCCGCCCAGAGGAAGATCCTGGC...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGGCCGGGCGGCCCAGCTaGTTCAGGTTGGCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGAGRPS*FRLAKS
Trigger: GCTCTTTGCCAACCTGAACCAGCTGGGCCGCCCGGC...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GACTCAGGAGAGACCAAGCTGGGTAAGTTAGTTCCTGGACGGGGTCAACAGAGCGGTGGACTGGGGGTATaGTCCAGCCTGCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: DSGETKLGKLVPGRGQQSGGLGV*SSLPGP
Trigger: TGGGCCGGGCAGGCTGGACCATACCCCCAGTCCACC...GCTCTGTTGACCCCGTCCAGGAACTAACTTACCCAGCTTGGTCTCTCCTGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTTGTGGAGACTGGAGCTaGTGGACTGGGGGTATGGTC +
Preference number: 4 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLCGDWS*WTGGMV
Trigger: GACCATACCCCCAGTCCACCAGCTCCAGTCTCCACA...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCCTCACTTGGGATTCCTaGCTCAACAGAGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSLTWDS*LNREGR
Trigger: CCTGCCCTCTCTGTTGAGCCAGGAATCCCAAGTGAG...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCGGGCAACCCCTCACTTaGGATTCCTGGCTCAACAGA +
Preference number: 4 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSGQPLT*DSWLNR
Trigger: TCTGTTGAGCCAGGAATCCCAAGTGAGGGGTTGCCC...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGACCAACACGATCACATaGCCAGGGCGGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGTNTIT*PGRGRE
Trigger: CTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGT...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GCAGGTGCCAGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGTGCTTTCTATCCTGCTaGCTGGAGGGTCCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: AGASPTARQHLFKQGQLLCFLSC*LEGPGR
Trigger: CCTTCCGGGACCCTCCAGCCAGCAGGATAGAAAGCA...CAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGCACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR TCA 90 bp AAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCTGATGTCGGAAGAAGTCGTTAGGTGGAGGAGGCCTTaGGGGAGGGTGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: KQGQLLPVLRELMSEEVVRWRRP*GRVGPR
Trigger: CCTGGGTCCCACCCTCCCTCAAGGCCTCCTCCACCT...AACGACTTCTTCCGACATCAGCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR TCA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCCCGTCCTTAGAGAGCTaGTGTCGGAAGAAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSPSLES*CRKKSL
Trigger: CAACGACTTCTTCCGACATCAGCTCTCTAAGGACGG...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTAGTAGGTGTCCTCGTTaGCGCCTCGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLSRCPR*RLAEVT
Trigger: AGTCACTTCAGCGAGGCGTCAACGAGGACACCTACT...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp CTTCTGCCCGTCCTTAGAGAGCTGATGTCGGAAGAAGTCGTTGGCTGCCAGCTTGAAAGGCAATGGGGGTaGGGCTCCGAGTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: LLPVLRELMSEEVVGCQLERQWG*GSESGR
Trigger: CCGGCCAGACTCGGAGCCTCACCCCCATTGCCTTTC...AAGCTGGCAGCCAACGACTTCTTCCGACATCAGCTCTCTAAGGACGGGCAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR GCA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGTCCTCTGGGCGGCAATaGGCCCTGCATCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGSSGRQ*ALHPAA
Trigger: AGCTGCAGGATGCAGGGCGCATTGCCGCCCAGAGGA...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGTGTAGAGACCGGCAATaGCACGGCTCCGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGCRDRQ*HGSAAG
Trigger: ACCTGCTGCGGAGCCGTGGCATTGCCGGTCTCTACA...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGAGTGGGTGGCGGGCTTaGCCCAAGAGTCAGACCTCA +
Preference number: 4 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGSGWRA*PKSQTS
Trigger: TGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACT...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp GACTCAGGAGAGACCAAGCTGGGTAAGTTAGTTCCTGGACGGGGTCAACAGAGCTCCCAATGCCCGCCCTaGTCCCTGGCCAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: DSGETKLGKLVPGRGQQSSQCPP*SLANPR
Trigger: CCTGGGATTGGCCAGGGAGCAGGGCGGGCATTGGGA...GCTCTGTTGACCCCGTCCAGGAACTAACTTACCCAGCTTGGTCTCTCCTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGTGGTCAGGGGCCTTATaGCCGGAGGCGGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGWSGAL*PEAGRM
Trigger: CATCCTTCCCGCCTCCGGGCATAAGGCCCCTGACCA...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTTCTGCAGCCTGGTCTTaGCCAGGTCGATGGGAAACA +
Preference number: 4 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLSAAWS*PGRWET
Trigger: TGTTTCCCATCGACCTGGCCAAGACCAGGCTGCAGA...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GCAGGTGCCAGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGTCTGCAGCCTGGTCTTaGCCAGGTCGATGGGAAACA +
Preference number: 4 (lower is better)
Translates to: AGASPTARQHLFKQGQLLSAAWS*PGRWET
Trigger: TGTTTCCCATCGACCTGGCCAAGACCAGGCTGCAGA...CAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CCA 90 bp CAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCCGCTGGCCGTTCTGCTaGTTCTGCAGCCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: QPASISLSRVSFCPSLESRWPFC*FCSLVL
Trigger: CAAGACCAGGCTGCAGAACCAGCAGAACGGCCAGCG...GCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CCA 90 bp GCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCTGGCATCTCCATGGGCGTaGTCACGATCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ARQHLFKQGQLLPVLRELASPWA*SRSPGR
Trigger: CCTGCCAGGTGATCGTGACCACGCCCATGGAGATGC...CAGCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CCA 90 bp GACTCAGGAGAGACCAAGCTGGGTAAGTTAGTTCCTGGACGGGGTCAACAGAGCGACCAGCTCTGTCCCTaGGGGTGTTCAGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: DSGETKLGKLVPGRGQQSDQLCP*GCSGQG
Trigger: GCCCTGGCCTGAACACCCCCAGGGACAGAGCTGGTC...GCTCTGTTGACCCCGTCCAGGAACTAACTTACCCAGCTTGGTCTCTCCTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GACTCAGGAGAGACCAAGCTGGGTAAGTTAGTTCCTGGACGGGGTCAACAGAGCGGCGACAAGAGCGGCTaGGGAAGGACGGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: DSGETKLGKLVPGRGQQSGDKSG*GRTEGL
Trigger: CAGCCCTTCCGTCCTTCCCCAGCCGCTCTTGTCGCC...GCTCTGTTGACCCCGTCCAGGAACTAACTTACCCAGCTTGGTCTCTCCTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGCGGAGGCGGGAAGGATaGGGCTTCTGCAGTGTACCC +
Preference number: 4 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGRRREG*GFCSVP
Trigger: GGGTACACTGCAGAAGCCCCATCCTTCCCGCCTCCG...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
3UTR CAA 72 bp TTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTaGGGATTCCTGGCTCAACAGAGAGGGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: LPQESDLRATPH*GFLAQQRGQET
Trigger: GGTCTCCTGCCCTCTCTGTTGAGCCAGGAATCCCAAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTCCGTCCTTAGAGAGCTaGTGTCGGAAGAAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLPSLES*CRKKSL
Trigger: CAACGACTTCTTCCGACATCAGCTCTCTAAGGACGG...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGTCCAAGGTTCTGATGTaGCGGGAGGGGCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGSKVLM*REGQLP
Trigger: TGGGAGCTGCCCCTCCCGTCACATCAGAACCTTGGA...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGGAAGTAGACCACCTGTaGGATGCCGAAAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGEVDHL*DAEKGR
Trigger: GCGCCCCTTTTCGGCATCGCACAGGTGGTCTACTTC...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGGCAGGGACTCCGCGATaGCCAGGAAGTAGACCACCT +
Preference number: 4 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGAGTPR*PGSRPP
Trigger: AGGTGGTCTACTTCCTGGGCATCGCGGAGTCCCTGC...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp CTTCTGCCCGTCCTTAGAGAGCTGATGTCGGAAGAAGTCGTTGGCTGCCAGCTTCCTCACCCCGGTACATaGCGAAGTAGCCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: LLPVLRELMSEEVVGCQLPHPGT*RSSPRS
Trigger: GCTCCGAGGGCTACTTCGGCATGTACCGGGGTGAGG...AAGCTGGCAGCCAACGACTTCTTCCGACATCAGCTCTCTAAGGACGGGCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR GCA 90 bp AAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCTGATGTCGGAAGAAGTCGTTGTGAACTCCCACGTGTaGGTCCCACACGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: KQGQLLPVLRELMSEEVVVNSHV*VPHGSA
Trigger: GGCCGACCCGTGTGGGACGCACACGTGGGAGTTCAC...AACGACTTCTTCCGACATCAGCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR GCA 90 bp CAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCACTCCAACTGCGCGATaGCTCGGCCAGAGGACAAAG +
Preference number: 4 (lower is better)
Translates to: QPASISLSRVSFCPSLESTPTAR*LGQRTK
Trigger: CTTTGTCCTCTGGCCGAGGCATCGCGCAGTTGGAGT...GCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR CCA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGCCCAGGCACTCACTCTaGATGGCTCTTCCACACTCC +
Preference number: 4 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGPRHSL*MALPHS
Trigger: GGAGTGTGGAAGAGCCATCCAGAGTGAGTGCCTGGG...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320230.9
CDS-3UTR CCA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGCGCTGGCCGTTCTGCTaGTTCTGCAGCCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGRWPFC*FCSLVL
Trigger: CAAGACCAGGCTGCAGAACCAGCAGAACGGCCAGCG...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GACTCAGGAGAGACCAAGCTGGGTAAGTTAGTTCCTGGACGGGGTCAACAGAGCGTGGTCACGATCACCTaGCAGGTGCCAGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: DSGETKLGKLVPGRGQQSVVTIT*QVPAPQ
Trigger: CTGTGGGGCTGGCACCTGCCAGGTGATCGTGACCAC...GCTCTGTTGACCCCGTCCAGGAACTAACTTACCCAGCTTGGTCTCTCCTGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGAAGTCCCACAGTGGGTaGCGGGCTTGCCCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGKSHSG*RACPKS
Trigger: ACTCTTGGGGCAAGCCCGCCACCCACTGTGGGACTT...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGGGGGTCAACAGAGCCTaGGGCACACACAGCACACAG +
Preference number: 4 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGGVNRA*GTHSTQ
Trigger: CTGTGTGCTGTGTGTGCCCCAGGCTCTGTTGACCCC...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
59% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GACTCAGGAGAGACCAAGCTGGGTAAGTTAGTTCCTGGACGGGGTCAACAGAGCGGAGGGCCCCGGTTTTaGGGACACAGCACCAGCACA +
Preference number: 4 (lower is better)
Translates to: DSGETKLGKLVPGRGQQSGGPRF*GHSTST
Trigger: TGTGCTGGTGCTGTGTCCCCAAAACCGGGGCCCTCC...GCTCTGTTGACCCCGTCCAGGAACTAACTTACCCAGCTTGGTCTCTCCTGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp CAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCGCCACTTCTGTCCCCTaGGACCACCTGGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: QPASISLSRVSFCPSLESATSVP*DHLASF
Trigger: AAAGGAAGCCAGGTGGTCCCAGGGGACAGAAGTGGC...GCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527734.5
CDS-3UTR CCA 90 bp CAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCCTGTCCCCGTCCTCTTaGGGCGGTGCTTTCTATCCT +
Preference number: 4 (lower is better)
Translates to: QPASISLSRVSFCPSLESLSPSS*GGAFYP
Trigger: AGGATAGAAAGCACCGCCCCAAGAGGACGGGGACAG...GCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR TCA 90 bp CTTCTGCCCGTCCTTAGAGAGCTGATGTCGGAAGAAGTCGTTGGCTGCCAGCTTTGGCCTTCTCGGGGGTaGCGAGGGTCAAGTTCACAG +
Preference number: 4 (lower is better)
Translates to: LLPVLRELMSEEVVGCQLWPSRG*RGSSSQ
Trigger: CTGTGAACTTGACCCTCGTCACCCCCGAGAAGGCCA...AAGCTGGCAGCCAACGACTTCTTCCGACATCAGCTCTCTAAGGACGGGCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR TCA 90 bp GCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTACCGTCCTTAGAGAGCTaGTGTCGGAAGAAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: APQPASISLSRVSFCPSLPSLES*CRKKSL
Trigger: CAACGACTTCTTCCGACATCAGCTCTCTAAGGACGG...TAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CCA 90 bp CTTCTGCCCGTCCTTAGAGAGCTGATGTCGGAAGAAGTCGTTGGCTGCCAGCTTGCATCTCCATGGGCGTaGTCACGATCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLPVLRELMSEEVVGCQLASPWA*SRSPGR
Trigger: CCTGCCAGGTGATCGTGACCACGCCCATGGAGATGC...AAGCTGGCAGCCAACGACTTCTTCCGACATCAGCTCTCTAAGGACGGGCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CCA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGGTCCTCTTGCAAGGCTaGCCAGGGAGGCAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGVLLQG*PGRQSQ
Trigger: TTGACTCTGCCTCCCTGGCCAGCCTTGCAAGAGGAC...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGCTCACTTGGGATTCCTaGCTCAACAGAGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGLTWDS*LNREGR
Trigger: CCTGCCCTCTCTGTTGAGCCAGGAATCCCAAGTGAG...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCGCTCCGTCCTCCGCCTaGCCACCGCGACTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPAPSSA*PPRLRP
Trigger: TGGCCGGAGTCGCGGTGGCCAGGCGGAGGACGGAGC...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531214.5
CDS-3UTR TCA 90 bp GCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCTGCCGTCCTTAGAGAGCTaGTGTCGGAAGAAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: ARQHLFKQGQLLPVLRELPSLES*CRKKSL
Trigger: CAACGACTTCTTCCGACATCAGCTCTCTAAGGACGG...CAGCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR TCA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGAGTAGGTGTCCTCGTTaGCGCCTCGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGSRCPR*RLAEVT
Trigger: AGTCACTTCAGCGAGGCGTCAACGAGGACACCTACT...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp AAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCTGATGTCGGAAGAAGTCGTTTCCACAGATGTCCGGTaGACTCCCACGTGTGCGTCC +
Preference number: 4 (lower is better)
Translates to: KQGQLLPVLRELMSEEVVSTDVR*TPTCAS
Trigger: GGACGCACACGTGGGAGTTCACCGGACATCTGTGGA...AACGACTTCTTCCGACATCAGCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR GCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCGCCGGCTCAGGCCCCTaGCCTACTGCTGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPAGSGP*PTAGAQ
Trigger: CTGAGCCCCAGCAGTAGGGCAGGGGCCTGAGCCGGC...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531214.5
CDS-3UTR GCA 90 bp AAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCTGATGTCGGAAGAAGTCGTTCGGTGCTTTCTATCCTaGTGGCTGGAGGGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: KQGQLLPVLRELMSEEVVRCFLS*WLEGPG
Trigger: TCCGGGACCCTCCAGCCAGCAGGATAGAAAGCACCG...AACGACTTCTTCCGACATCAGCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR CCA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGGGGCAACCCCTCACTTaGGATTCCTGGCTCAACAGA +
Preference number: 4 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGGQPLT*DSWLNR
Trigger: TCTGTTGAGCCAGGAATCCCAAGTGAGGGGTTGCCC...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCAGGTGGAGGAGGCCTTaGGGGAGGGTGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPRWRRP*GRVGPR
Trigger: CCTGGGTCCCACCCTCCCTCAAGGCCTCCTCCACCT...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCCGATCACCTGGCAGGTaGCAGCCCCACAGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPRSPGR*QPHSPP
Trigger: TGGCGGGCTGTGGGGCTGGCACCTGCCAGGTGATCG...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCGCCGAGGGGCCCTCGTaGCGCAGGATCTTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPAEGPS*RRIFLA
Trigger: TGCCAGGAAGATCCTGCGGCACGAGGGCCCCTCGGC...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACTGCACCCTGCCCCCTaGTGCCCCTGCCGACGGGAG +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAALHPAP*CPCRRE
Trigger: CTCCCGTCGGCAGGGGCAGCAGGGGGCAGGGTGCAG...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp CTTCTGCCCGTCCTTAGAGAGCTGATGTCGGAAGAAGTCGTTGGCTGCCAGCTTTCTGCAGCCTGGTCTTaGCCAGGTCGATGGGAAACA +
Preference number: 4 (lower is better)
Translates to: LLPVLRELMSEEVVGCQLSAAWS*PGRWET
Trigger: TGTTTCCCATCGACCTGGCCAAGACCAGGCTGCAGA...AAGCTGGCAGCCAACGACTTCTTCCGACATCAGCTCTCTAAGGACGGGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCGGTGGACTGGGGGTATaGTCCAGCCTGCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPGGLGV*SSLPGP
Trigger: TGGGCCGGGCAGGCTGGACCATACCCCCAGTCCACC...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCGAAAGGCAATGGGGGTaGGGCTCCGAGTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPERQWG*GSESGR
Trigger: CCGGCCAGACTCGGAGCCTCACCCCCATTGCCTTTC...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531214.5
CDS-3UTR GCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCAAGGCCCCTGCCCTACTaGTGGGGCTCAGCCGACCGC +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAARPLPY*WGSADR
Trigger: GCGGTCGGCTGAGCCCCAGCAGTAGGGCAGGGGCCT...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531214.5
CDS-3UTR CCA 90 bp GACTCAGGAGAGACCAAGCTGGGTAAGTTAGTTCCTGGACGGGGTCAACAGAGCCCAGCTGGTTCAGGTTaGCAAAGAGCGGGAAGTACA +
Preference number: 4 (lower is better)
Translates to: DSGETKLGKLVPGRGQQSPAGSG*QRAGST
Trigger: TGTACTTCCCGCTCTTTGCCAACCTGAACCAGCTGG...GCTCTGTTGACCCCGTCCAGGAACTAACTTACCCAGCTTGGTCTCTCCTGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCGCCGGGCGGCCCAGCTaGTTCAGGTTGGCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPAGRPS*FRLAKS
Trigger: GCTCTTTGCCAACCTGAACCAGCTGGGCCGCCCGGC...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCGACCAGCTCTGTCCCTaGGGGTGTTCAGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPDQLCP*GCSGQG
Trigger: GCCCTGGCCTGAACACCCCCAGGGACAGAGCTGGTC...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCGGCGACAAGAGCGGCTaGGGAAGGACGGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPGDKSG*GRTEGL
Trigger: CAGCCCTTCCGTCCTTCCCCAGCCGCTCTTGTCGCC...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCTCGGCCTTTCTTCCTTaGGCTCGGGCCCCGGACACC +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPSAFLP*ARAPDT
Trigger: GGTGTCCGGGGCCCGAGCCCAAGGAAGAAAGGCCGA...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531214.5
CDS-3UTR CCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCCTGCCCTACTGCTaGGGCTCAGCCGACCGCTCC +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAAPLPYC*GSADRS
Trigger: GGAGCGGTCGGCTGAGCCCCAGCAGTAGGGCAGGGG...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531214.5
CDS-3UTR TCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCTGGGAAACACGCAGGTaGCACCGATCAGCCCGGCGA +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPWETRR*HRSARR
Trigger: TCGCCGGGCTGATCGGTGTCACCTGCGTGTTTCCCA...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR TCA 90 bp AAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCTGATGTCGGAAGAAGTCGTTCCGTCCTTAGAGAGCTaGTGTCGGAAGAAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: KQGQLLPVLRELMSEEVVPSLES*CRKKSL
Trigger: CAACGACTTCTTCCGACATCAGCTCTCTAAGGACGG...AACGACTTCTTCCGACATCAGCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR TCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCGACGCCTCGCTGAAGTaGCTGGAGCCGCGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPDASLK*LEPRLH
Trigger: GTGAAGACGCGGCTCCAGTCACTTCAGCGAGGCGTC...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR TCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACGAAAAGGGGCGCGATaGCCAGCGCGCGGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAARKGAR*PARGSR
Trigger: CCTACTGCCGCGCGCTGGTCATCGCGCCCCTTTTCG...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCACGCGCTGGCCGTTCTaGTGGTTCTGCAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPTRWPF*WFCSLV
Trigger: GACCAGGCTGCAGAACCAGCAGAACGGCCAGCGCGT...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCCAGCTCCCCGGTACATaGCGAAGTAGCCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPQLPGT*RSSPRS
Trigger: GCTCCGAGGGCTACTTCGGCATGTACCGGGGAGCTG...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACGATCACCTGGCAGGTaGCAGCCCCACAGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAARSPGR*QPHSPP
Trigger: TGGCGGGCTGTGGGGCTGGCACCTGCCAGGTGATCG...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCGTCCTGGGCTAGCTaGCTGGCTCCAGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAAPSWAS*LAPAPH
Trigger: GTGTGGGGCTGGAGCCAGGCAGCTAGCCCAGGACGG...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCTGTGCACCACCTATGTaGACCCTGCACCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPCAPPM*TLHPAP
Trigger: GGGGGCAGGGTGCAGGGTCCACATAGGTGGTGCACA...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCAAAGGAGAAGCGGGTTaGGGGCCGCTCTCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPKGEAG*GPLSAL
Trigger: GAGCGCAGAGAGCGGCCCCCAACCCGCTTCTCCTTT...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531214.5
CDS-3UTR TCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCTGGCCTTCTCGGGGGTaGCGAGGGTCAAGTTCACAG +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPWPSRG*RGSSSQ
Trigger: CTGTGAACTTGACCCTCGTCACCCCCGAGAAGGCCA...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR TCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCTCCACAGATGTCCGGTaGACTCCCACGTGTGCGTCC +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPSTDVR*TPTCAS
Trigger: GGACGCACACGTGGGAGTTCACCGGACATCTGTGGA...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531214.5
CDS-3UTR GCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCGTCCTGCTCTCACTCTaGCCCAGGCACTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPVLLSL*PRHSLW
Trigger: CCAGAGTGAGTGCCTGGGGCAGAGTGAGAGCAGGAC...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320230.9
CDS-3UTR GCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCTGTAGAGACCGGCAATaGCACGGCTCCGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPCRDRQ*HGSAAG
Trigger: ACCTGCTGCGGAGCCGTGGCATTGCCGGTCTCTACA...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCGCAGGGACTCCGCGATaGCCAGGAAGTAGACCACCT +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPAGTPR*PGSRPP
Trigger: AGGTGGTCTACTTCCTGGGCATCGCGGAGTCCCTGC...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCGGCAGAGTCAAGTCCTaGCAAGGCGACAAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPGRVKS*QGDKSG
Trigger: GCCGCTCTTGTCGCCTTGGCAGGACTTGACTCTGCC...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCAGTGGGTGGCGGGCTTaGCCCAAGAGTCAGACCTCA +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPSGWRA*PKSQTS
Trigger: TGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACT...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCCGCTGGCCGTTCTGCTaGTTCTGCAGCCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPRWPFC*FCSLVL
Trigger: CAAGACCAGGCTGCAGAACCAGCAGAACGGCCAGCG...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCCTCGTGTACACGCGCTaGCCGTTCTGCTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPLVYTR*PFCWFC
Trigger: GCAGAACCAGCAGAACGGCCAGCGCGTGTACACGAG...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCGCATCTCCATGGGCGTaGTCACGATCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPASPWA*SRSPGR
Trigger: CCTGCCAGGTGATCGTGACCACGCCCATGGAGATGC...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCGCCGCAGGATCTTCCTaGCACAGTCCAGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPAAGSS*HSPGSQ
Trigger: CTGGGATCCTGGACTGTGCCAGGAAGATCCTGCGGC...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCCAGAAAGTCCCACAGTaGGTGGCGGGCTTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPQKVPQ*VAGLPQ
Trigger: TTGGGGCAAGCCCGCCACCCACTGTGGGACTTTCTG...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCTTCTATCCTGCTGGCTaGAGGGTCCCGGAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPFYPAG*RVPEGD
Trigger: GTCCCCTTCCGGGACCCTCCAGCCAGCAGGATAGAA...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531214.5
CDS-3UTR GCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCATCCTCTGGGCGGCAATaGGCCCTGCATCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAASSGRQ*ALHPAA
Trigger: AGCTGCAGGATGCAGGGCGCATTGCCGCCCAGAGGA...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCGAAGTAGACCACCTGTaGGATGCCGAAAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPEVDHL*DAEKGR
Trigger: GCGCCCCTTTTCGGCATCGCACAGGTGGTCTACTTC...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCAGAAGGGGACTCCAACTaGGCGATGCCTCGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAAEGDSN*AMPRPE
Trigger: CTCTGGCCGAGGCATCGCGCAGTTGGAGTCCCCTTC...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531214.5
CDS-3UTR CCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCATCCCTTGCTCCGTCCTaGGCTAGCTGCCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAASLAPS*ASCLAP
Trigger: TGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGA...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCATGTGCACCACCTATGTaGACCCTGCACCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAACAPPM*TLHPAP
Trigger: GGGGGCAGGGTGCAGGGTCCACATAGGTGGTGCACA...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCGTCCTCTTGCAAGGCTaGCCAGGGAGGCAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPVLLQG*PGRQSQ
Trigger: TTGACTCTGCCTCCCTGGCCAGCCTTGCAAGAGGAC...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCAACAGACCTCACAATCTaGGCCCCAGCCTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAATDLTI*APAWGG
Trigger: CCCACCCCAGGCTGGGGCCCAGATTGTGAGGTCTGT...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR GCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCAGGCGGCAATGCGCCCTaGATCCTGCAGCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAAGGNAP*ILQLDL
Trigger: AAGATCCAGCTGCAGGATGCAGGGCGCATTGCCGCC...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACGGTGCTTTCTATCCTaGTGGCTGGAGGGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAARCFLS*WLEGPG
Trigger: TCCGGGACCCTCCAGCCAGCAGGATAGAAAGCACCG...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531214.5
CDS-3UTR CCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACTCGTGTACACGCGCTaGCCGTTCTGCTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAALVYTR*PFCWFC
Trigger: GCAGAACCAGCAGAACGGCCAGCGCGTGTACACGAG...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACAGAAAGTCCCACAGTaGGTGGCGGGCTTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAAQKVPQ*VAGLPQ
Trigger: TTGGGGCAAGCCCGCCACCCACTGTGGGACTTTCTG...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR TCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCCCGTCCTTAGAGAGCTaGTGTCGGAAGAAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPPSLES*CRKKSL
Trigger: CAACGACTTCTTCCGACATCAGCTCTCTAAGGACGG...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR GCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCAACTCCAACTGCGCGATaGCTCGGCCAGAGGACAAAG +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAATPTAR*LGQRTK
Trigger: CTTTGTCCTCTGGCCGAGGCATCGCGCAGTTGGAGT...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531214.5
CDS-3UTR CCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCAGCTGAAAAAGGAGGGTaGGCCCTGAGAGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAAAEKGG*ALRGLG
Trigger: CCCAAGTCCTCTCAGGGCCCACCCTCCTTTTTCAGC...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCATGCTTTCTATCCTGCTaGCTGGAGGGTCCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAACFLSC*LEGPGR
Trigger: CCTTCCGGGACCCTCCAGCCAGCAGGATAGAAAGCA...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531214.5
CDS-3UTR TCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCAAGTAGGTGTCCTCGTTaGCGCCTCGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAASRCPR*RLAEVT
Trigger: AGTCACTTCAGCGAGGCGTCAACGAGGACACCTACT...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR TCA 90 bp GACTCAGGAGAGACCAAGCTGGGTAAGTTAGTTCCTGGACGGGGTCAACAGAGCCATTTTCTACATAAATaGGACATTGATCCCAACGGT +
Preference number: 4 (lower is better)
Translates to: DSGETKLGKLVPGRGQQSHFLHK*DIDPNG
Trigger: ACCGTTGGGATCAATGTCTCATTTATGTAGAAAATG...GCTCTGTTGACCCCGTCCAGGAACTAACTTACCCAGCTTGGTCTCTCCTGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCATTGATGAGCTTGGCTaGCAGGCTGATCTGCTTATC +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPIDELG*QADLLI
Trigger: GATAAGCAGATCAGCCTGCCAGCCAAGCTCATCAAT...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CCA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCAGCTGGTTCAGGTTaGCAAAGAGCGGGAAGTACA +
Preference number: 4 (lower is better)
Translates to: DFCIFYINETLIPTVQAAPAGSG*QRAGST
Trigger: TGTACTTCCCGCTCTTTGCCAACCTGAACCAGCTGG...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR TCA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCCATTTTCTACATAAATaGGACATTGATCCCAACGGT +
Preference number: 4 (lower is better)
Translates to: FCIFYINETLIPTVQAAPHFLHK*DIDPNG
Trigger: ACCGTTGGGATCAATGTCTCATTTATGTAGAAAATG...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS GCA 90 bp GGGCCGCTCTCTGCGCTCGGAGGCCGGCTCAGGCCCCTGCCCTACTaGTGGGGCTCAGCCGACCGCTCCGTCCTCCGCCTGGCCACCGCG +
Preference number: 5 (lower is better)
Translates to: GPLSALGGRLRPLPY*WGSADRSVLRLATA
Trigger: CGCGGTGGCCAGGCGGAGGACGGAGCGGTCGGCTGAGCCCCAGCAGTAGGGCAGGGGCCTGAGCCGGCCTCCGAGCGCAGAGAGCGGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531214.5
CDS CCA 90 bp CCGCTCTCTGCGCTCGGAGGCCGGCTCAGGCCCCTGCCCTACTGCTaGGGCTCAGCCGACCGCTCCGTCCTCCGCCTGGCCACCGCGACT +
Preference number: 5 (lower is better)
Translates to: PLSALGGRLRPLPYC*GSADRSVLRLATAT
Trigger: AGTCGCGGTGGCCAGGCGGAGGACGGAGCGGTCGGCTGAGCCCCAGCAGTAGGGCAGGGGCCTGAGCCGGCCTCCGAGCGCAGAGAGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531214.5
CDS CCA 90 bp CAATGCCACGGCTCCGCAGCAGGTCGCGGGTCAGCTGGGTGGCCGTaGGCCGAGGGGCAGCTGGAGCCTCCACTGAGGGCTGGGCACCCC +
Preference number: 5 (lower is better)
Translates to: QCHGSAAGRGSAGWP*AEGQLEPPLRAGHP
Trigger: GGGGTGCCCAGCCCTCAGTGGAGGCTCCAGCTGCCCCTCGGCCCACGGCCACCCAGCTGACCCGCGACCTGCTGCGGAGCCGTGGCATTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320230.9
ENST00000481290.5
ENST00000531214.5
ENST00000531437.5
ENST00000532484.5
ENST00000625419.2
ENST00000627843.2
ENST00000628067.3
ENST00000630809.2
CDS CCA 90 bp GGGCTGGGCCATCCACCACCGACCCCCGCTCCGCCACCTGCCCGCTaGTCCTGCTCTCACTCTGCCCCAGGCACTCACTCTGGATGGCTC +
Preference number: 5 (lower is better)
Translates to: GLGHPPPTPAPPPAR*SCSHSAPGTHSGWL
Trigger: GAGCCATCCAGAGTGAGTGCCTGGGGCAGAGTGAGAGCAGGACCAGCGGGCAGGTGGCGGAGCGGGGGTCGGTGGTGGATGGCCCAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320230.9
ENST00000530360.2
ENST00000625316.2
ENST00000625752.2
ENST00000629602.1
ENST00000629634.2
CDS GCA 90 bp CTTTCCAGGGCTGGGCCATCCACCACCGACCCCCGCTCCGCCACCTaGCCGCTGGTCCTGCTCTCACTCTGCCCCAGGCACTCACTCTGG +
Preference number: 5 (lower is better)
Translates to: LSRAGPSTTDPRSAT*PLVLLSLCPRHSLW
Trigger: CCAGAGTGAGTGCCTGGGGCAGAGTGAGAGCAGGACCAGCGGGCAGGTGGCGGAGCGGGGGTCGGTGGTGGATGGCCCAGCCCTGGAAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320230.9
ENST00000530360.2
ENST00000625316.2
ENST00000625752.2
ENST00000629602.1
ENST00000629634.2
CDS-3UTR CAA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCTGTCCGGCAGCGCCGTaGCCCAGGGCCACGCGGCTG +
Preference number: 5 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSCPAAP*PRATRL
Trigger: CAGCCGCGTGGCCCTGGGCAACGGCGCTGCCGGACA...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320230.9
CDS-3UTR CAA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGCCGGCGATGCCGCCATaGATGAGCTTGGCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQPAMPP*MSLAGR
Trigger: CCTGCCAGCCAAGCTCATCAATGGCGGCATCGCCGG...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CAA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGTGGAGGGCCCCGGTTTaGGGGACACAGCACCAGCAC +
Preference number: 5 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQWRAPV*GTQHQH
Trigger: GTGCTGGTGCTGTGTCCCCAAAACCGGGGCCCTCCA...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS GCA 90 bp TCCGGCCACGCACGTGTCCACAGATGTCCGGTGAACTCCCACGTGTaGGTCCCACACGGGTCGGCCTTTCTTCCTTGGGCTCGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: SGHARVHRCPVNSHV*VPHGSAFLPWARAP
Trigger: CGGGGCCCGAGCCCAAGGAAGAAAGGCCGACCCGTGTGGGACGCACACGTGGGAGTTCACCGGACATCTGTGGACACGTGCGTGGCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531214.5
CDS CCA 90 bp GTGAACTCCCACGTGTGCGTCCCACACGGGTCGGCCTTTCTTCCTTaGGCTCGGGCCCCGGACACCCACCCTCGGGGACACGTATGTGCG +
Preference number: 5 (lower is better)
Translates to: VNSHVCVPHGSAFLP*ARAPDTHPRGHVCA
Trigger: CGCACATACGTGTCCCCGAGGGTGGGTGTCCGGGGCCCGAGCCCAAGGAAGAAAGGCCGACCCGTGTGGGACGCACACGTGGGAGTTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS CCA 90 bp CTGGCCGGCGGCTCCCCATTCAATCTCCCGCTGTCCCCGTCCTCTTaGGGCGGTGCTTTCTATCCTGCTGGCTGGAGGGTCCCGGAAGGG +
Preference number: 5 (lower is better)
Translates to: LAGGSPFNLPLSPSS*GGAFYPAGWRVPEG
Trigger: CCCTTCCGGGACCCTCCAGCCAGCAGGATAGAAAGCACCGCCCCAAGAGGACGGGGACAGCGGGAGATTGAATGGGGAGCCGCCGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531214.5
CDS-3UTR CAA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGGCTGTCCCCGTCCTCTaGGGGCGGTGCTTTCTATCC +
Preference number: 5 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQAVPVL*GRCFLS
Trigger: GGATAGAAAGCACCGCCCCAAGAGGACGGGGACAGC...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000531214.5
CDS GCA 90 bp CTGAAGCCGTCACTGCGTCCTGAGGGTGCAGCAGCGGGAGGCACCTaGCACCCAGTCCCATGCTCACCCCTGGGACCACCTGGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: LKPSLRPEGAAAGGT*HPVPCSPLGPPGFL
Trigger: AAGGAAGCCAGGTGGTCCCAGGGGTGAGCATGGGACTGGGTGGCAGGTGCCTCCCGCTGCTGCACCCTCAGGACGCAGTGACGGCTTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527723.5
CDS GCA 90 bp ATCCTGCTGGCTGGAGGGTCCCGGAAGGGGACTCCAACTGCGCGATaGCTCGGCCAGAGGACAAAGGAGAAGCGGGTTGGGGGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: ILLAGGSRKGTPTAR*LGQRTKEKRVGGRS
Trigger: AGAGCGGCCCCCAACCCGCTTCTCCTTTGTCCTCTGGCCGAGGCATCGCGCAGTTGGAGTCCCCTTCCGGGACCCTCCAGCCAGCAGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531214.5
CDS CCA 90 bp ACAGATCCTCAGGGACTCGTAACCTTCACCTCGGCTTTCCAGGGCTaGGCCATCCACCACCGACCCCCGCTCCGCCACCTGCCCGCTGGT +
Preference number: 5 (lower is better)
Translates to: TDPQGLVTFTSAFQG*AIHHRPPLRHLPAG
Trigger: ACCAGCGGGCAGGTGGCGGAGCGGGGGTCGGTGGTGGATGGCCCAGCCCTGGAAAGCCGAGGTGAAGGTTACGAGTCCCTGAGGATCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320230.9
ENST00000530360.2
ENST00000532459.5
ENST00000625316.2
ENST00000625752.2
ENST00000629602.1
CDS CCA 90 bp TCAGATCCTCAGGGACTCGTAACCTTCACCTCGGCTTTCCAGGGCTaGGCCATCCACCACCGACCCCCGCTCCGCCACCTGCCCGCTGGT +
Preference number: 5 (lower is better)
Translates to: SDPQGLVTFTSAFQG*AIHHRPPLRHLPAG
Trigger: ACCAGCGGGCAGGTGGCGGAGCGGGGGTCGGTGGTGGATGGCCCAGCCCTGGAAAGCCGAGGTGAAGGTTACGAGTCCCTGAGGATCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533385.5
CDS-3UTR CAA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGCCGCCATTGATGAGCTaGGCTGGCAGGCTGATCTGC +
Preference number: 5 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQPPLMS*AGRLIC
Trigger: GCAGATCAGCCTGCCAGCCAAGCTCATCAATGGCGG...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CAA 90 bp CCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACACCACATCACAGGGGTaGACGGCCACAGCGGCGGCA +
Preference number: 5 (lower is better)
Translates to: PQWVAGLPQESDLRATPHTTSQG*TATAAA
Trigger: TGCCGCCGCTGTGGCCGTCAACCCCTGTGATGTGGT...GTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CAA 90 bp CCCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACAGTGGGTGGCGGGCTaGCCCCAAGAGTCAGACCTC +
Preference number: 5 (lower is better)
Translates to: PTVGGGLAPRVRPQGNPSQWVAG*PQESDL
Trigger: GAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTG...TGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS TCA 90 bp CTGGCCACCGCGACTCCGGCCACGCACGTGTCCACAGATGTCCGGTaGACTCCCACGTGTGCGTCCCACACGGGTCGGCCTTTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: LATATPATHVSTDVR*TPTCASHTGRPFFL
Trigger: AAGGAAGAAAGGCCGACCCGTGTGGGACGCACACGTGGGAGTTCACCGGACATCTGTGGACACGTGCGTGGCCGGAGTCGCGGTGGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531214.5
CDS GCA 90 bp CGCCACTTCTGTCGTGTCCACAGATGTCCGGTGAACTCCCACGTGTaGGTCCCACACGGGTCGGCCTTTCTTCCTTGGGCTCGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: RHFCRVHRCPVNSHV*VPHGSAFLPWARAP
Trigger: CGGGGCCCGAGCCCAAGGAAGAAAGGCCGACCCGTGTGGGACGCACACGTGGGAGTTCACCGGACATCTGTGGACACGACAGAAGTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532484.5
CDS-3UTR CAA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCCCGGCGATGCCGCCATaGATGAGCTTGGCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSPAMPP*MSLAGR
Trigger: CCTGCCAGCCAAGCTCATCAATGGCGGCATCGCCGG...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CAA 90 bp GGGCTGGGGAGGGGTCTTCCCTTGCTCCGTCCTGGGCTAGCTGCCTGGCTCCAGTTCTGCAGCCTGGTCTaGGCCAGGTCGATGGGAAAC +
Preference number: 5 (lower is better)
Translates to: GLGRGLPLLRPGLAAWLQFCSLV*ARSMGN
Trigger: GTTTCCCATCGACCTGGCCAAGACCAGGCTGCAGAA...CTGGAGCCAGGCAGCTAGCCCAGGACGGAGCAAGGGAAGACCCCTCCCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CAA 90 bp CAGAGAGGGCAGGAGACCCCAGTCCTCTTGCAAGGCTGGCCAGGGAGGCAGAGTACCACATCACAGGGGTaGACGGCCACAGCGGCGGCA +
Preference number: 5 (lower is better)
Translates to: QRGQETPVLLQGWPGRQSTTSQG*TATAAA
Trigger: TGCCGCCGCTGTGGCCGTCAACCCCTGTGATGTGGT...ACTCTGCCTCCCTGGCCAGCCTTGCAAGAGGACTGGGGTCTCCTGCCCTCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CAA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCCAGTGGGTGGCGGGCTaGCCCCAAGAGTCAGACCTC +
Preference number: 5 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSQWVAG*PQESDL
Trigger: GAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTG...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS GCA 90 bp GCTTTCTATCCTGCTGGCTGGAGGGTCCCGGAAGGGGACTCCAACTaGGCGATGCCTCGGCCAGAGGACAAAGGAGAAGCGGGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: AFYPAGWRVPEGDSN*AMPRPEDKGEAGWG
Trigger: CCCCCAACCCGCTTCTCCTTTGTCCTCTGGCCGAGGCATCGCGCAGTTGGAGTCCCCTTCCGGGACCCTCCAGCCAGCAGGATAGAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531214.5
CDS-3UTR CAA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTCCGGCGATGCCGCCATaGATGAGCTTGGCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLPAMPP*MSLAGR
Trigger: CCTGCCAGCCAAGCTCATCAATGGCGGCATCGCCGG...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CAA 90 bp GCAGGTGCCAGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCGGCGATGCCGCCATaGATGAGCTTGGCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: AGASPTARQHLFKQGQLLPAMPP*MSLAGR
Trigger: CCTGCCAGCCAAGCTCATCAATGGCGGCATCGCCGG...CAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGCACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CAA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTGAGACCCCAGTCCTCTaGCAAGGCTGGCCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLETPVL*QGWPGR
Trigger: CCTCCCTGGCCAGCCTTGCAAGAGGACTGGGGTCTC...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CAA 90 bp ACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACTTTGGAGGGCCCCGGTTTaGGGGACACAGCACCAGCAC +
Preference number: 5 (lower is better)
Translates to: TVGGGLAPRVRPQGNPSLWRAPV*GTQHQH
Trigger: GTGCTGGTGCTGTGTCCCCAAAACCGGGGCCCTCCA...AAGTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CAA 90 bp GCCAGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCGCTGTCCCCGTCCTCTaGGGGCGGTGCTTTCTATCC +
Preference number: 5 (lower is better)
Translates to: ASPTARQHLFKQGQLLPVAVPVL*GRCFLS
Trigger: GGATAGAAAGCACCGCCCCAAGAGGACGGGGACAGC...GACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS GCA 90 bp ACTGGGCCAGAGCTCGGGGGAGGCTGTGGAGAGCCCCCATCTCAGTaGCGAAGGCTCAGGGCTGGAGAGCTTCTGCCAAATCTAGGCTCT +
Preference number: 5 (lower is better)
Translates to: TGPELGGGCGEPPSQ*RRLRAGELLPNLGS
Trigger: AGAGCCTAGATTTGGCAGAAGCTCTCCAGCCCTGAGCCTTCGGCACTGAGATGGGGGCTCTCCACAGCCTCCCCCGAGCTCTGGCCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532361.5
CDS-3UTR CAA 90 bp TCACCAACACGATCACATGGCCAGGGCGGGGCAGGGAGAGCTTCGGCTCACAGCCCGCCATTGATGAGCTaGGCTGGCAGGCTGATCTGC +
Preference number: 5 (lower is better)
Translates to: SPTRSHGQGGAGRASAHSPPLMS*AGRLIC
Trigger: GCAGATCAGCCTGCCAGCCAAGCTCATCAATGGCGG...GCTGTGAGCCGAAGCTCTCCCTGCCCCGCCCTGGCCATGTGATCGTGTTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CAA 90 bp GCCAGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCTCGGAGCGGACGGTCTaGATGAGGCAGTCGGACATG +
Preference number: 5 (lower is better)
Translates to: ASPTARQHLFKQGQLLPVSERTV*MRQSDM
Trigger: CATGTCCGACTGCCTCATCAAGACCGTCCGCTCCGA...GACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CAA 90 bp CAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCGTCGGCCTTTCTTCCTaGGGCTCGGGCCCCGGACAC +
Preference number: 5 (lower is better)
Translates to: QPASISLSRVSFCPSLESVGLSS*GSGPGH
Trigger: GTGTCCGGGGCCCGAGCCCAAGGAAGAAAGGCCGAC...GCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529351.5
CDS-3UTR CAA 90 bp CCACAGTGGGTGGCGGGCTTGCCCCAAGAGTCAGACCTCAGGGCAACCCCTCACAGCCATTTAACTCGATaGCACCCAGGTAGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: PQWVAGLPQESDLRATPHSHLTR*HPGRSR
Trigger: GCGGCTCCTACCTGGGTGCAATCGAGTTAAATGGCT...GTGAGGGGTTGCCCTGAGGTCTGACTCTTGGGGCAAGCCCGCCACCCACTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CAA 90 bp CAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCCCGGCGATGCCGCCATaGATGAGCTTGGCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: QPASISLSRVSFCPSLESPAMPP*MSLAGR
Trigger: CCTGCCAGCCAAGCTCATCAATGGCGGCATCGCCGG...GCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CAA 90 bp GCCAGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCTTCTGCAGCCTGGTCTaGGCCAGGTCGATGGGAAAC +
Preference number: 5 (lower is better)
Translates to: ASPTARQHLFKQGQLLPVFCSLV*ARSMGN
Trigger: GTTTCCCATCGACCTGGCCAAGACCAGGCTGCAGAA...GACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CAA 90 bp CAGAGAGGGCAGGAGACCCCAGTCCTCTTGCAAGGCTGGCCAGGGAGGCAGAGTCCCAGCTGGTTCAGGTaGGCAAAGAGCGGGAAGTAC +
Preference number: 5 (lower is better)
Translates to: QRGQETPVLLQGWPGRQSPSWFR*AKSGKY
Trigger: GTACTTCCCGCTCTTTGCCAACCTGAACCAGCTGGG...ACTCTGCCTCCCTGGCCAGCCTTGCAAGAGGACTGGGGTCTCCTGCCCTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS CCA 90 bp ATGAGGCAGTCGGACATGCTCGTGTACACGCGCTGGCCGTTCTGCTaGTTCTGCAGCCTGGTCTTGGCCAGGTCGATGGGAAACACGCAG +
Preference number: 5 (lower is better)
Translates to: MRQSDMLVYTRWPFC*FCSLVLARSMGNTQ
Trigger: CTGCGTGTTTCCCATCGACCTGGCCAAGACCAGGCTGCAGAACCAGCAGAACGGCCAGCGCGTGTACACGAGCATGTCCGACTGCCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 29 transcripts:
ENST00000320230.9
ENST00000456706.6
ENST00000524891.5
ENST00000525010.5
ENST00000525644.3
ENST00000526152.5
ENST00000527127.5
ENST00000527723.5
ENST00000527734.5
ENST00000528606.5
ENST00000528936.5
ENST00000529066.5
ENST00000529351.5
ENST00000530360.2
ENST00000531214.5
ENST00000531437.5
ENST00000531514.5
ENST00000531534.5
ENST00000532361.5
ENST00000532459.5
ENST00000532484.5
ENST00000533385.5
ENST00000625316.2
ENST00000625419.2
ENST00000625752.2
ENST00000627843.2
ENST00000628067.3
ENST00000629602.1
ENST00000629634.2
CDS CCA 90 bp CTGGACTGTCTAGGGATGCTCGTGTACACGCGCTGGCCGTTCTGCTaGTTCTGCAGCCTGGTCTTGGCCAGGTCGATGGGAAACACGCAG +
Preference number: 5 (lower is better)
Translates to: LDCLGMLVYTRWPFC*FCSLVLARSMGNTQ
Trigger: CTGCGTGTTTCCCATCGACCTGGCCAAGACCAGGCTGCAGAACCAGCAGAACGGCCAGCGCGTGTACACGAGCATCCCTAGACAGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481290.5
CDS CCA 90 bp GACAGATGTACCATGGCATCCCACGCACCAGGCACTAAGTGGGGGTaGGGAGCTGCCACGGGAGAGGCTGAGAACTACCACTCACCAGAG +
Preference number: 5 (lower is better)
Translates to: DRCTMASHAPGTKWG*GAATGEAENYHSPE
Trigger: CTCTGGTGAGTGGTAGTTCTCAGCCTCTCCCGTGGCAGCTCCCCACCCCCACTTAGTGCCTGGTGCGTGGGATGCCATGGTACATCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532361.5
CDS-3UTR CAA 90 bp GCCAGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCAGCCATTTAACTCGATaGCACCCAGGTAGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: ASPTARQHLFKQGQLLPVSHLTR*HPGRSR
Trigger: GCGGCTCCTACCTGGGTGCAATCGAGTTAAATGGCT...GACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CAA 90 bp AGCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTCCGCCATTGATGAGCTaGGCTGGCAGGCTGATCTGC +
Preference number: 5 (lower is better)
Translates to: SPTARQHLFKQGQLLPVLPPLMS*AGRLIC
Trigger: GCAGATCAGCCTGCCAGCCAAGCTCATCAATGGCGG...AAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CAA 90 bp GCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTACCGCCATTGATGAGCTaGGCTGGCAGGCTGATCTGC +
Preference number: 5 (lower is better)
Translates to: APQPASISLSRVSFCPSLPPLMS*AGRLIC
Trigger: GCAGATCAGCCTGCCAGCCAAGCTCATCAATGGCGG...TAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CAA 90 bp GCCCCACAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTATCGGAGCGGACGGTCTaGATGAGGCAGTCGGACATG +
Preference number: 5 (lower is better)
Translates to: APQPASISLSRVSFCPSLSERTV*MRQSDM
Trigger: CATGTCCGACTGCCTCATCAAGACCGTCCGCTCCGA...TAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTGTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CAA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGTCGGAGCGGACGGTCTaGATGAGGCAGTCGGACATG +
Preference number: 5 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGSERTV*MRQSDM
Trigger: CATGTCCGACTGCCTCATCAAGACCGTCCGCTCCGA...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CAA 90 bp CAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCTCGGAGCGGACGGTCTaGATGAGGCAGTCGGACATG +
Preference number: 5 (lower is better)
Translates to: QPASISLSRVSFCPSLESSERTV*MRQSDM
Trigger: CATGTCCGACTGCCTCATCAAGACCGTCCGCTCCGA...GCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CAA 90 bp GACTCAGGAGAGACCAAGCTGGGTAAGTTAGTTCCTGGACGGGGTCAACAGAGCGAGACCCCAGTCCTCTaGCAAGGCTGGCCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: DSGETKLGKLVPGRGQQSETPVL*QGWPGR
Trigger: CCTCCCTGGCCAGCCTTGCAAGAGGACTGGGGTCTC...GCTCTGTTGACCCCGTCCAGGAACTAACTTACCCAGCTTGGTCTCTCCTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS TCA 90 bp GGATCTTCCTGGCACAGTCCAGGATCCCAGAGTAGGTGTCCTCGTTaGCGCCTCGCTGAAGTGACTGGAGCCGCGTCTTCACCACATCAC +
Preference number: 5 (lower is better)
Translates to: GSSWHSPGSQSRCPR*RLAEVTGAASSPHH
Trigger: GTGATGTGGTGAAGACGCGGCTCCAGTCACTTCAGCGAGGCGTCAACGAGGACACCTACTCTGGGATCCTGGACTGTGCCAGGAAGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320230.9
ENST00000481290.5
ENST00000531214.5
ENST00000628067.3
CDS CCA 90 bp AGAAGAGACAGATGTACCATGGCATCCCACGCACCAGGCACTAAGTaGGGGTGGGGAGCTGCCACGGGAGAGGCTGAGAACTACCACTCA +
Preference number: 5 (lower is better)
Translates to: RRDRCTMASHAPGTK*GWGAATGEAENYHS
Trigger: TGAGTGGTAGTTCTCAGCCTCTCCCGTGGCAGCTCCCCACCCCCACTTAGTGCCTGGTGCGTGGGATGCCATGGTACATCTGTCTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532361.5
CDS-3UTR CAA 90 bp AAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCTGATGTCGGAAGAAGTCGTTCCGGCGATGCCGCCATaGATGAGCTTGGCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: KQGQLLPVLRELMSEEVVPAMPP*MSLAGR
Trigger: CCTGCCAGCCAAGCTCATCAATGGCGGCATCGCCGG...AACGACTTCTTCCGACATCAGCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CAA 90 bp CAGCCCGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCAGCCATTTAACTCGATaGCACCCAGGTAGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: QPASISLSRVSFCPSLESSHLTR*HPGRSR
Trigger: GCGGCTCCTACCTGGGTGCAATCGAGTTAAATGGCT...GCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CAA 90 bp GACTCAGGAGAGACCAAGCTGGGTAAGTTAGTTCCTGGACGGGGTCAACAGAGCTCGGAGCGGACGGTCTaGATGAGGCAGTCGGACATG +
Preference number: 5 (lower is better)
Translates to: DSGETKLGKLVPGRGQQSSERTV*MRQSDM
Trigger: CATGTCCGACTGCCTCATCAAGACCGTCCGCTCCGA...GCTCTGTTGACCCCGTCCAGGAACTAACTTACCCAGCTTGGTCTCTCCTGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CAA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGCCCAGCTGGTTCAGGTaGGCAAAGAGCGGGAAGTAC +
Preference number: 5 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGPSWFR*AKSGKY
Trigger: GTACTTCCCGCTCTTTGCCAACCTGAACCAGCTGGG...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CAA 90 bp ACACATACACACACACATGCACACAGACCTCACAATCTGGGCCCCAGCCTGGGGGGGCTGGAGAGCCGCTaGGGTCCAGCAGATTCAATA +
Preference number: 5 (lower is better)
Translates to: THTHTHAHRPHNLGPSLGGLESR*GPADSI
Trigger: TATTGAATCTGCTGGACCCAAGCGGCTCTCCAGCCC...CCCCAGGCTGGGGCCCAGATTGTGAGGTCTGTGTGCATGTGTGTGTGTATGTGT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CAA 90 bp AAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCTGATGTCGGAAGAAGTCGTTCCGCCATTGATGAGCTaGGCTGGCAGGCTGATCTGC +
Preference number: 5 (lower is better)
Translates to: KQGQLLPVLRELMSEEVVPPLMS*AGRLIC
Trigger: GCAGATCAGCCTGCCAGCCAAGCTCATCAATGGCGG...AACGACTTCTTCCGACATCAGCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CAA 90 bp CGCCAGCATCTCTTTAAGCAGGGTCAGCTTCTGCCCGTCCTTAGAGAGCTGATGTTCTGCAGCCTGGTCTaGGCCAGGTCGATGGGAAAC +
Preference number: 5 (lower is better)
Translates to: RQHLFKQGQLLPVLRELMFCSLV*ARSMGN
Trigger: GTTTCCCATCGACCTGGCCAAGACCAGGCTGCAGAA...CATCAGCTCTCTAAGGACGGGCAGAAGCTGACCCTGCTTAAAGAGATGCTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527734.5
ENST00000529351.5
ENST00000531514.5
CDS-3UTR CAA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCGTCGGCCTTTCTTCCTaGGGCTCGGGCCCCGGACAC +
Preference number: 5 (lower is better)
Translates to: FCIFYINETLIPTVQAAPVGLSS*GSGPGH
Trigger: GTGTCCGGGGCCCGAGCCCAAGGAAGAAAGGCCGAC...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531214.5
CDS-3UTR CAA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCACCACATCACAGGGGTaGACGGCCACAGCGGCGGCA +
Preference number: 5 (lower is better)
Translates to: FCIFYINETLIPTVQAAPTTSQG*TATAAA
Trigger: TGCCGCCGCTGTGGCCGTCAACCCCTGTGATGTGGT...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CAA 90 bp GGACACAGCACCAGCACATCAGGGTCTGTCACCAACACGATCACATGGCCAGGGTACATAAATGAGACATaGATCCCAACGGTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: GHSTSTSGSVTNTITWPGYINET*IPTVQA
Trigger: TGCCTGCACCGTTGGGATCAATGTCTCATTTATGTA...CCCTGGCCATGTGATCGTGTTGGTGACAGACCCTGATGTGCTGGTGCTGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CAA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCTTCTGCAGCCTGGTCTaGGCCAGGTCGATGGGAAAC +
Preference number: 5 (lower is better)
Translates to: FCIFYINETLIPTVQAAPFCSLV*ARSMGN
Trigger: GTTTCCCATCGACCTGGCCAAGACCAGGCTGCAGAA...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CAA 90 bp TTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCAGCCATTTAACTCGATaGCACCCAGGTAGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: FCIFYINETLIPTVQAAPSHLTR*HPGRSR
Trigger: GCGGCTCCTACCTGGGTGCAATCGAGTTAAATGGCT...GGGTGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CAA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCGCCATTGATGAGCTaGGCTGGCAGGCTGATCTGC +
Preference number: 5 (lower is better)
Translates to: DFCIFYINETLIPTVQAAPPLMS*AGRLIC
Trigger: GCAGATCAGCCTGCCAGCCAAGCTCATCAATGGCGG...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CAA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCATCGGAGCGGACGGTCTaGATGAGGCAGTCGGACATG +
Preference number: 5 (lower is better)
Translates to: DFCIFYINETLIPTVQAASERTV*MRQSDM
Trigger: CATGTCCGACTGCCTCATCAAGACCGTCCGCTCCGA...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CAA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCACCCAGCTGGTTCAGGTaGGCAAAGAGCGGGAAGTAC +
Preference number: 5 (lower is better)
Translates to: DFCIFYINETLIPTVQAAPSWFR*AKSGKY
Trigger: GTACTTCCCGCTCTTTGCCAACCTGAACCAGCTGGG...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS-3UTR CAA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCAGGGCTGGAGAGCCGCTaGGGTCCAGCAGATTCAATA +
Preference number: 5 (lower is better)
Translates to: DFCIFYINETLIPTVQAAGLESR*GPADSI
Trigger: TATTGAATCTGCTGGACCCAAGCGGCTCTCCAGCCC...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320230.9
ENST00000628067.3
CDS-3UTR CAA 90 bp GATTTCTGCATTTTCTACATAAATGAGACATTGATCCCAACGGTGCAGGCAGCATACATAAATGAGACATaGATCCCAACGGTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: DFCIFYINETLIPTVQAAYINET*IPTVQA
Trigger: TGCCTGCACCGTTGGGATCAATGTCTCATTTATGTA...TGCTGCCTGCACCGTTGGGATCAATGTCTCATTTATGTAGAAAATGCAGAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS CCA 72 bp GCGCTCGGAGGCCGGCTCAGGCCCCTGCCCTACTGCTaGGGCTCAGCCGACCGCTCCGTCCTCCGCCTGGCC +
Preference number: 6 (lower is better)
Translates to: ALGGRLRPLPYC*GSADRSVLRLA
Trigger: GGCCAGGCGGAGGACGGAGCGGTCGGCTGAGCCCCAGCAGTAGGGCAGGGGCCTGAGCCGGCCTCCGAGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531214.5
CDS GCA 72 bp GGCCGCTCTCTGCGCTCGGAGGCCGGCTCAGGCCCCTaGCCTACTGCTGGGGCTCAGCCGACCGCTCCGTCC +
Preference number: 6 (lower is better)
Translates to: GRSLRSEAGSGP*PTAGAQPTAPS
Trigger: GGACGGAGCGGTCGGCTGAGCCCCAGCAGTAGGGCAGGGGCCTGAGCCGGCCTCCGAGCGCAGAGAGCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531214.5
CDS GCA 72 bp TCTGCGCTCGGAGGCCGGCTCAGGCCCCTGCCCTACTaGTGGGGCTCAGCCGACCGCTCCGTCCTCCGCCTG +
Preference number: 6 (lower is better)
Translates to: SALGGRLRPLPY*WGSADRSVLRL
Trigger: CAGGCGGAGGACGGAGCGGTCGGCTGAGCCCCAGCAGTAGGGCAGGGGCCTGAGCCGGCCTCCGAGCGCAGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531214.5
CDS CCA 72 bp GGCTCCGCAGCAGGTCGCGGGTCAGCTGGGTGGCCGTaGGCCGAGGGGCAGCTGGAGCCTCCACTGAGGGCT +
Preference number: 6 (lower is better)
Translates to: GSAAGRGSAGWP*AEGQLEPPLRA
Trigger: AGCCCTCAGTGGAGGCTCCAGCTGCCCCTCGGCCCACGGCCACCCAGCTGACCCGCGACCTGCTGCGGAGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320230.9
ENST00000481290.5
ENST00000531214.5
ENST00000531437.5
ENST00000532484.5
ENST00000625419.2
ENST00000627843.2
ENST00000628067.3
ENST00000630809.2
CDS GCA 72 bp GCTGGGCCATCCACCACCGACCCCCGCTCCGCCACCTaGCCGCTGGTCCTGCTCTCACTCTGCCCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: AGPSTTDPRSAT*PLVLLSLCPRH
Trigger: GTGCCTGGGGCAGAGTGAGAGCAGGACCAGCGGGCAGGTGGCGGAGCGGGGGTCGGTGGTGGATGGCCCAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320230.9
ENST00000528936.5
ENST00000530360.2
ENST00000532459.5
ENST00000625316.2
ENST00000625752.2
ENST00000629602.1
ENST00000629634.2
CDS CCA 72 bp GCGATGCCTCGGCCAGAGGACAAAGGAGAAGCGGGTTaGGGGCCGCTCTCTGCGCTCGGAGGCCGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: AMPRPEDKGEAG*GPLSALGGRLR
Trigger: CCTGAGCCGGCCTCCGAGCGCAGAGAGCGGCCCCCAACCCGCTTCTCCTTTGTCCTCTGGCCGAGGCATCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531214.5
CDS CCA 72 bp CCGCCACTTCTGTCCTTCACCTCGGCTTTCCAGGGCTaGGCCATCCACCACCGACCCCCGCTCCGCCACCTG +
Preference number: 6 (lower is better)
Translates to: PPLLSFTSAFQG*AIHHRPPLRHL
Trigger: CAGGTGGCGGAGCGGGGGTCGGTGGTGGATGGCCCAGCCCTGGAAAGCCGAGGTGAAGGACAGAAGTGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528936.5
CDS CCA 72 bp CAGCAACCGCCACTTCTGTCCTCGGCTTTCCAGGGCTaGGCCATCCACCACCGACCCCCGCTCCGCCACCTG +
Preference number: 6 (lower is better)
Translates to: QQPPLLSSAFQG*AIHHRPPLRHL
Trigger: CAGGTGGCGGAGCGGGGGTCGGTGGTGGATGGCCCAGCCCTGGAAAGCCGAGGACAGAAGTGGCGGTTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000629634.2
CDS TCA 72 bp GCGACTCCGGCCACGCACGTGTCCACAGATGTCCGGTaGACTCCCACGTGTGCGTCCCACACGGGTCGGCCT +
Preference number: 6 (lower is better)
Translates to: ATPATHVSTDVR*TPTCASHTGRP
Trigger: AGGCCGACCCGTGTGGGACGCACACGTGGGAGTTCACCGGACATCTGTGGACACGTGCGTGGCCGGAGTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531214.5
CDS CCA 72 bp CAGGGACTCGTAACCTTCACCTCGGCTTTCCAGGGCTaGGCCATCCACCACCGACCCCCGCTCCGCCACCTG +
Preference number: 6 (lower is better)
Translates to: QGLVTFTSAFQG*AIHHRPPLRHL
Trigger: CAGGTGGCGGAGCGGGGGTCGGTGGTGGATGGCCCAGCCCTGGAAAGCCGAGGTGAAGGTTACGAGTCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320230.9
ENST00000530360.2
ENST00000532459.5
ENST00000533385.5
ENST00000625316.2
ENST00000625752.2
ENST00000629602.1
CDS GCA 72 bp GCTGGAGGGTCCCGGAAGGGGACTCCAACTGCGCGATaGCTCGGCCAGAGGACAAAGGAGAAGCGGGTTGGG +
Preference number: 6 (lower is better)
Translates to: AGGSRKGTPTAR*LGQRTKEKRVG
Trigger: CCCAACCCGCTTCTCCTTTGTCCTCTGGCCGAGGCATCGCGCAGTTGGAGTCCCCTTCCGGGACCCTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531214.5
CDS TCA 72 bp AGTAGACCACCTGTGCGATGCCGAAAAGGGGCGCGATaGCCAGCGCGCGGCAGTAGGCGCCCTTCAGGAAGG +
Preference number: 6 (lower is better)
Translates to: SRPPVRCRKGAR*PARGSRRPSGR
Trigger: CCTTCCTGAAGGGCGCCTACTGCCGCGCGCTGGTCATCGCGCCCCTTTTCGGCATCGCACAGGTGGTCTACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320230.9
ENST00000531214.5
ENST00000628067.3
CDS CCA 72 bp CCGTCCTCTTGGGGCGGTGCTTTCTATCCTGCTGGCTaGAGGGTCCCGGAAGGGGACTCCAACTGCGCGATG +
Preference number: 6 (lower is better)
Translates to: PSSWGGAFYPAG*RVPEGDSNCAM
Trigger: CATCGCGCAGTTGGAGTCCCCTTCCGGGACCCTCCAGCCAGCAGGATAGAAAGCACCGCCCCAAGAGGACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531214.5
CDS TCA 72 bp GCAACCGCCACTTCTGTCGTGTCCACAGATGTCCGGTaGACTCCCACGTGTGCGTCCCACACGGGTCGGCCT +
Preference number: 6 (lower is better)
Translates to: ATATSVVSTDVR*TPTCASHTGRP
Trigger: AGGCCGACCCGTGTGGGACGCACACGTGGGAGTTCACCGGACATCTGTGGACACGACAGAAGTGGCGGTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532484.5
CDS CCA 72 bp TCTCCTCGGACGCCGGGCGGCCCAGCTGGTTCAGGTTaGCAAAGAGCGGGAAGTACACCACAGAGAAGGGGA +
Preference number: 6 (lower is better)
Translates to: SPRTPGGPAGSG*QRAGSTPQRRG
Trigger: TCCCCTTCTCTGTGGTGTACTTCCCGCTCTTTGCCAACCTGAACCAGCTGGGCCGCCCGGCGTCCGAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320230.9
ENST00000481290.5
ENST00000531214.5
ENST00000627843.2
ENST00000628067.3
ENST00000630809.2
CDS CCA 72 bp GGCTCCCCATTCAATCTCCCGCTGTCCCCGTCCTCTTaGGGCGGTGCTTTCTATCCTGCTGGCTGGAGGGTC +
Preference number: 6 (lower is better)
Translates to: GSPFNLPLSPSS*GGAFYPAGWRV
Trigger: GACCCTCCAGCCAGCAGGATAGAAAGCACCGCCCCAAGAGGACGGGGACAGCGGGAGATTGAATGGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531214.5
CDS CCA 72 bp ACCATGGCATCCCACGCACCAGGCACTAAGTGGGGGTaGGGAGCTGCCACGGGAGAGGCTGAGAACTACCAC +
Preference number: 6 (lower is better)
Translates to: TMASHAPGTKWG*GAATGEAENYH
Trigger: GTGGTAGTTCTCAGCCTCTCCCGTGGCAGCTCCCCACCCCCACTTAGTGCCTGGTGCGTGGGATGCCATGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532361.5
CDS CAA 90 bp AAAGGCGACTTCTCCTCGGACGCCGGGCGGCCCAGCTGGTTCAGGTaGGCAAAGAGCGGGAAGTACACCACAGAGAAGGGGACATCCCTG +
Preference number: 6 (lower is better)
Translates to: KGDFSSDAGRPSWFR*AKSGKYTTEKGTSL
Trigger: CAGGGATGTCCCCTTCTCTGTGGTGTACTTCCCGCTCTTTGCCAACCTGAACCAGCTGGGCCGCCCGGCGTCCGAGGAGAAGTCGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320230.9
ENST00000481290.5
ENST00000531214.5
ENST00000627843.2
ENST00000628067.3
ENST00000630809.2
CDS GCA 72 bp GCACGTGTCCACAGATGTCCGGTGAACTCCCACGTGTaGGTCCCACACGGGTCGGCCTTTCTTCCTTGGGCT +
Preference number: 6 (lower is better)
Translates to: ARVHRCPVNSHV*VPHGSAFLPWA
Trigger: AGCCCAAGGAAGAAAGGCCGACCCGTGTGGGACGCACACGTGGGAGTTCACCGGACATCTGTGGACACGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531214.5
CDS GCA 72 bp ATTCAATCTCCCGCTGTCCCCGTCCTCTTGGGGCGGTaGTTTCTATCCTGCTGGCTGGAGGGTCCCGGAAGG +
Preference number: 6 (lower is better)
Translates to: IQSPAVPVLLGR*FLSCWLEGPGR
Trigger: CCTTCCGGGACCCTCCAGCCAGCAGGATAGAAAGCACCGCCCCAAGAGGACGGGGACAGCGGGAGATTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529351.5
ENST00000531214.5
CDS CCA 72 bp TCCCTGGACTGTCTAGGGATGCTCGTGTACACGCGCTaGCCGTTCTGCTGGTTCTGCAGCCTGGTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: SLDCLGMLVYTR*PFCWFCSLVLA
Trigger: GGCCAAGACCAGGCTGCAGAACCAGCAGAACGGCCAGCGCGTGTACACGAGCATCCCTAGACAGTCCAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481290.5
CDS CCA 72 bp AGGCGTCAGCAACCGCCACTTCGGAGCACCTCGACCTaGACAGCTGTGGTGACCATCCCCCACATCCTTCAG +
Preference number: 6 (lower is better)
Translates to: RRQQPPLRSTST*TAVVTIPHILQ
Trigger: CTGAAGGATGTGGGGGATGGTCACCACAGCTGTCCAGGTCGAGGTGCTCCGAAGTGGCGGTTGCTGACGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529066.5
CDS CAA 90 bp GAGCTTGGCTGGCAGGCTGATCTGCTTATCAGCCATTTAACTCGATaGCACCCAGGTAGGAGCCGCAGAGGTGGACGCCAGGCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: ELGWQADLLISHLTR*HPGRSRRGGRQARR
Trigger: CCGCCTGGCCTGGCGTCCACCTCTGCGGCTCCTACCTGGGTGCAATCGAGTTAAATGGCTGATAAGCAGATCAGCCTGCCAGCCAAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 30 transcripts:
ENST00000320230.9
ENST00000456706.6
ENST00000481290.5
ENST00000524891.5
ENST00000525010.5
ENST00000525644.3
ENST00000526152.5
ENST00000527127.5
ENST00000527723.5
ENST00000527734.5
ENST00000528606.5
ENST00000528936.5
ENST00000529066.5
ENST00000529351.5
ENST00000530360.2
ENST00000531214.5
ENST00000531437.5
ENST00000531514.5
ENST00000531534.5
ENST00000532361.5
ENST00000532459.5
ENST00000532484.5
ENST00000533385.5
ENST00000625316.2
ENST00000625419.2
ENST00000625752.2
ENST00000627843.2
ENST00000628067.3
ENST00000629602.1
ENST00000629634.2
CDS TCA 72 bp CGCCACTTCGGAGCACCTCGACCTGGACAGCTGTGGTaGCCATCCCCCACATCCTTCAGCACAGAGAGAGCA +
Preference number: 6 (lower is better)
Translates to: RHFGAPRPGQLW*PSPTSFSTERA
Trigger: TGCTCTCTCTGTGCTGAAGGATGTGGGGGATGGTCACCACAGCTGTCCAGGTCGAGGTGCTCCGAAGTGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529066.5
CDS GCA 72 bp ATGCTCGTGTACACGCGCTGGCCGTTCTGCTGGTTCTaGAGCCTGGTCTTGGCCAGGTCGATGGGAAACACG +
Preference number: 6 (lower is better)
Translates to: MLVYTRWPFCWF*SLVLARSMGNT
Trigger: CGTGTTTCCCATCGACCTGGCCAAGACCAGGCTGCAGAACCAGCAGAACGGCCAGCGCGTGTACACGAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 30 transcripts:
ENST00000320230.9
ENST00000456706.6
ENST00000481290.5
ENST00000524891.5
ENST00000525010.5
ENST00000525644.3
ENST00000526152.5
ENST00000527127.5
ENST00000527723.5
ENST00000527734.5
ENST00000528606.5
ENST00000528936.5
ENST00000529066.5
ENST00000529351.5
ENST00000530360.2
ENST00000531214.5
ENST00000531437.5
ENST00000531514.5
ENST00000531534.5
ENST00000532361.5
ENST00000532459.5
ENST00000532484.5
ENST00000533385.5
ENST00000625316.2
ENST00000625419.2
ENST00000625752.2
ENST00000627843.2
ENST00000628067.3
ENST00000629602.1
ENST00000629634.2
CDS GCA 72 bp TGTCGTGTCCACAGATGTCCGGTGAACTCCCACGTGTaGGTCCCACACGGGTCGGCCTTTCTTCCTTGGGCT +
Preference number: 6 (lower is better)
Translates to: CRVHRCPVNSHV*VPHGSAFLPWA
Trigger: AGCCCAAGGAAGAAAGGCCGACCCGTGTGGGACGCACACGTGGGAGTTCACCGGACATCTGTGGACACGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532484.5
CDS CCA 72 bp TTGATGAGGCAGTCGGACATGCTCGTGTACACGCGCTaGCCGTTCTGCTGGTTCTGCAGCCTGGTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: LMRQSDMLVYTR*PFCWFCSLVLA
Trigger: GGCCAAGACCAGGCTGCAGAACCAGCAGAACGGCCAGCGCGTGTACACGAGCATGTCCGACTGCCTCATCAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 29 transcripts:
ENST00000320230.9
ENST00000456706.6
ENST00000524891.5
ENST00000525010.5
ENST00000525644.3
ENST00000526152.5
ENST00000527127.5
ENST00000527723.5
ENST00000527734.5
ENST00000528606.5
ENST00000528936.5
ENST00000529066.5
ENST00000529351.5
ENST00000530360.2
ENST00000531214.5
ENST00000531437.5
ENST00000531514.5
ENST00000531534.5
ENST00000532361.5
ENST00000532459.5
ENST00000532484.5
ENST00000533385.5
ENST00000625316.2
ENST00000625419.2
ENST00000625752.2
ENST00000627843.2
ENST00000628067.3
ENST00000629602.1
ENST00000629634.2
CDS CCA 72 bp GCAGCTGTGGCCACCAGAGAAGAGACAGATGTACCATaGCATCCCACGCACCAGGCACTAAGTGGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: AAVATREETDVP*HPTHQALSGGG
Trigger: CCCACCCCCACTTAGTGCCTGGTGCGTGGGATGCCATGGTACATCTGTCTCTTCTCTGGTGGCCACAGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532361.5
CDS CCA 72 bp TCAGCAACCGCCACTTCTGTCCGGAGCACCTCGACCTaGACAGCTGTGGTGACCATCCCCCACATCCTTCAG +
Preference number: 6 (lower is better)
Translates to: SATATSVRSTST*TAVVTIPHILQ
Trigger: CTGAAGGATGTGGGGGATGGTCACCACAGCTGTCCAGGTCGAGGTGCTCCGGACAGAAGTGGCGGTTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531534.5
CDS TCA 72 bp TGGCACAGTCCAGGATCCCAGAGTAGGTGTCCTCGTTaGCGCCTCGCTGAAGTGACTGGAGCCGCGTCTTCA +
Preference number: 6 (lower is better)
Translates to: WHSPGSQSRCPR*RLAEVTGAASS
Trigger: TGAAGACGCGGCTCCAGTCACTTCAGCGAGGCGTCAACGAGGACACCTACTCTGGGATCCTGGACTGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320230.9
ENST00000481290.5
ENST00000531214.5
ENST00000628067.3
CDS TCA 72 bp CTTCTGTCCGGAGCACCTCGACCTGGACAGCTGTGGTaGCCATCCCCCACATCCTTCAGCACAGAGAGAGCA +
Preference number: 6 (lower is better)
Translates to: LLSGAPRPGQLW*PSPTSFSTERA
Trigger: TGCTCTCTCTGTGCTGAAGGATGTGGGGGATGGTCACCACAGCTGTCCAGGTCGAGGTGCTCCGGACAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531534.5
CDS CAA 72 bp ACGCAGGTGACACCGATCAGCCCGGCGATGCCGCCATaGATGAGCTTGGCTGGCAGGCTGATCTGCTTATCA +
Preference number: 6 (lower is better)
Translates to: TQVTPISPAMPP*MSLAGRLICLS
Trigger: TGATAAGCAGATCAGCCTGCCAGCCAAGCTCATCAATGGCGGCATCGCCGGGCTGATCGGTGTCACCTGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 30 transcripts:
ENST00000320230.9
ENST00000456706.6
ENST00000481290.5
ENST00000524891.5
ENST00000525010.5
ENST00000525644.3
ENST00000526152.5
ENST00000527127.5
ENST00000527723.5
ENST00000527734.5
ENST00000528606.5
ENST00000528936.5
ENST00000529066.5
ENST00000529351.5
ENST00000530360.2
ENST00000531214.5
ENST00000531437.5
ENST00000531514.5
ENST00000531534.5
ENST00000532361.5
ENST00000532459.5
ENST00000532484.5
ENST00000533385.5
ENST00000625316.2
ENST00000625419.2
ENST00000625752.2
ENST00000627843.2
ENST00000628067.3
ENST00000629602.1
ENST00000629634.2
CDS CAA 72 bp TGGCAGGCTGATCTGCTTATCAGCCATTTAACTCGATaGCACCCAGGTAGGAGCCGCAGAGGTGGACGCCAG +
Preference number: 6 (lower is better)
Translates to: WQADLLISHLTR*HPGRSRRGGRQ
Trigger: CTGGCGTCCACCTCTGCGGCTCCTACCTGGGTGCAATCGAGTTAAATGGCTGATAAGCAGATCAGCCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 30 transcripts:
ENST00000320230.9
ENST00000456706.6
ENST00000481290.5
ENST00000524891.5
ENST00000525010.5
ENST00000525644.3
ENST00000526152.5
ENST00000527127.5
ENST00000527723.5
ENST00000527734.5
ENST00000528606.5
ENST00000528936.5
ENST00000529066.5
ENST00000529351.5
ENST00000530360.2
ENST00000531214.5
ENST00000531437.5
ENST00000531514.5
ENST00000531534.5
ENST00000532361.5
ENST00000532459.5
ENST00000532484.5
ENST00000533385.5
ENST00000625316.2
ENST00000625419.2
ENST00000625752.2
ENST00000627843.2
ENST00000628067.3
ENST00000629602.1
ENST00000629634.2
CDS CAA 90 bp CGAAGGCTCAGGGCTGGAGAGCTTCTGCCAAATCTAGGCTCTGGATaGTGTCCTAAGCTGCTTTGCGGTAATGCCCCTTACTCCCTCCCA +
Preference number: 6 (lower is better)
Translates to: RRLRAGELLPNLGSG*CPKLLCGNAPYSLP
Trigger: TGGGAGGGAGTAAGGGGCATTACCGCAAAGCAGCTTAGGACACAATCCAGAGCCTAGATTTGGCAGAAGCTCTCCAGCCCTGAGCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532361.5
CDS GCA 72 bp CCAAATCTAGGCTCTGGATTGTGTCCTAAGCTGCTTTaGGGTAATGCCCCTTACTCCCTCCCATCCCCAGCC +
Preference number: 6 (lower is better)
Translates to: PNLGSGLCPKLL*GNAPYSLPSPA
Trigger: GGCTGGGGATGGGAGGGAGTAAGGGGCATTACCGCAAAGCAGCTTAGGACACAATCCAGAGCCTAGATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532361.5
CDS CAA 72 bp AGGGCTGGAGAGCTTCTGCCAAATCTAGGCTCTGGATaGTGTCCTAAGCTGCTTTGCGGTAATGCCCCTTAC +
Preference number: 6 (lower is better)
Translates to: RAGELLPNLGSG*CPKLLCGNAPY
Trigger: GTAAGGGGCATTACCGCAAAGCAGCTTAGGACACAATCCAGAGCCTAGATTTGGCAGAAGCTCTCCAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532361.5