Pregenerated sensors for SLC25A20 (Homo sapiens)
Ensembl gene IDs: ENSG00000178537Ensembl transcript IDs: ENST00000319017.5, ENST00000430379.5
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACCTTGCCCTCCAAGACTaGTTAGTTCTGCTTACTACT | + |
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Preference number: 2 (lower is better) Translates to: QNPTINSLSPPRHICSIHLALQD*LVLLTT Trigger: AGTAGTAAGCAGAACTAAGCAGTCTTGGAGGGCAAG...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319017.5 ENST00000430379.5 |
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| 3UTR-3UTR CCA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACCAGCTCCTGGTGATCTaGTTGAAAATATGCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: QNPTINSLSPPRHICSIHQLLVI*LKICTV Trigger: CACTGTGCATATTTTCAACCAGATCACCAGGAGCTG...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000319017.5 ENST00000430379.5 |
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| 3UTR-3UTR CCA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACTCAAATGGGTATTCCTaGCTAGGGACTGAAGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: QNPTINSLSPPRHICSIHSNGYS*LGTEED Trigger: ATCTTCTTCAGTCCCTAGCCAGGAATACCCATTTGA...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319017.5 ENST00000430379.5 |
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| 3UTR-3UTR CAA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACCTCCTGGTGATCTGGTaGAAAATATGCACAGTGCCT | + |
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Preference number: 3 (lower is better) Translates to: QNPTINSLSPPRHICSIHLLVIW*KICTVP Trigger: AGGCACTGTGCATATTTTCAACCAGATCACCAGGAG...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000319017.5 ENST00000430379.5 |
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| 3UTR-3UTR CAA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACTGGTCTGGAAGCTACTaGTTCCATTTCCAAATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QNPTINSLSPPRHICSIHWSGSY*FHFQIL Trigger: AAGGATTTGGAAATGGAACAAGTAGCTTCCAGACCA...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319017.5 ENST00000430379.5 |
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| 3UTR-3UTR CAA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACTTAATGAGGAATACTTaGACTGTGGTAGGACCAGCA | + |
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Preference number: 3 (lower is better) Translates to: QNPTINSLSPPRHICSIHLMRNT*TVVGPA Trigger: TGCTGGTCCTACCACAGTCAAAGTATTCCTCATTAA...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319017.5 ENST00000430379.5 |
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| CDS-3UTR GCA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACCAGCCCCAGCTGCAGTaGCGGCGCCGCCGACCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QNPTINSLSPPRHICSIHQPQLQ*RRRRPF Trigger: GAAAGGTCGGCGGCGCCGGCACTGCAGCTGGGGCTG...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000319017.5 ENST00000430379.5 |
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| CDS-3UTR GCA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACCTTCTCAGCCCCAGCTaGAGTGCCGGCGCCGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QNPTINSLSPPRHICSIHLLSPS*SAGAAD Trigger: GTCGGCGGCGCCGGCACTGCAGCTGGGGCTGAGAAG...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000319017.5 ENST00000430379.5 |
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| CDS-3UTR CCA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACGTTCTCGGGCCGTCCTaGCTTCTCAGCCCCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QNPTINSLSPPRHICSIHVLGPS*LLSPSC Trigger: GCAGCTGGGGCTGAGAAGCCAGGACGGCCCGAGAAC...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000319017.5 ENST00000430379.5 |
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| CDS-3UTR CCA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACTTGGCTGGTCGGCCATaGTCAGTCCGTCTGTCACTC | + |
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Preference number: 4 (lower is better) Translates to: QNPTINSLSPPRHICSIHLAGRP*SVRLSL Trigger: GAGTGACAGACGGACTGACCATGGCCGACCAGCCAA...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319017.5 ENST00000430379.5 |
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| CDS-3UTR CCA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACCTGATGGGTTTTGGCTaGTCGGCCATGGTCAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QNPTINSLSPPRHICSIHLMGFG*SAMVSP Trigger: CGGACTGACCATGGCCGACCAGCCAAAACCCATCAG...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000319017.5 ENST00000430379.5 |
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| CDS-3UTR TCA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACAAAGCTGGGGATAGCTaGGCACATCTTCTGGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: QNPTINSLSPPRHICSIHKAGDS*AHLLGV Trigger: AACACCCAGAAGATGTGCTCAGCTATCCCCAGCTTT...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319017.5 |
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| CDS-3UTR CCA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACTATGCTCAATCCACTTaGACACAGAGGTGGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: QNPTINSLSPPRHICSIHYAQST*TQRWAS Trigger: TGAGGCCCACCTCTGTGTCCAAGTGGATTGAGCATA...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319017.5 ENST00000430379.5 |
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| CDS-3UTR TCA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACTCTGTAATAAGCACTTaGTCCGTTCTCCAGGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: QNPTINSLSPPRHICSIHSVIST*SVLQES Trigger: TGACTCCTGGAGAACGGATCAAGTGCTTATTACAGA...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319017.5 |
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| CDS-3UTR TCA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACGTACTTGCTTTCTCCTaGAGAAGCCTGAATCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: QNPTINSLSPPRHICSIHVLAFS*RSLNLS Trigger: AGAGAGATTCAGGCTTCTTCAGGAGAAAGCAAGTAC...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430379.5 |
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| CDS-3UTR GCA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACGGCTCGGATCATCACTaGATTGAACCCTTTGTACAA | + |
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Preference number: 4 (lower is better) Translates to: QNPTINSLSPPRHICSIHGSDHH*IEPFVQ Trigger: TTGTACAAAGGGTTCAATGCAGTGATGATCCGAGCC...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319017.5 ENST00000430379.5 |
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| CDS-3UTR GCA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACCCTCCTAGGCATATATaGTCAATCCACTTGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: QNPTINSLSPPRHICSIHPPRHI*SIHLDT Trigger: TGTGTCCAAGTGGATTGAGCATATATGCCTAGGAGG...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319017.5 ENST00000430379.5 |
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| CDS-3UTR CCA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACATACATTCCACTAGCTaGGACATCTCGCATAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: QNPTINSLSPPRHICSIHIHSTS*DISHKG Trigger: ACCCTTATGCGAGATGTCCCAGCTAGTGGAATGTAT...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319017.5 ENST00000430379.5 |
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| CDS-3UTR TCA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACTCTTTCCCTCCGGAGTaGAGATATTTTTCAGCCATT | + |
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Preference number: 4 (lower is better) Translates to: QNPTINSLSPPRHICSIHSFPPE*RYFSAI Trigger: AATGGCTGAAAAATATCTTCACTCCGGAGGGAAAGA...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000319017.5 ENST00000430379.5 |
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| CDS-3UTR TCA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACTCTCCTGAAGAAGCCTaGATCTCTCTAAAAAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QNPTINSLSPPRHICSIHSPEEA*ISLKRV Trigger: GACTCTTTTTAGAGAGATTCAGGCTTCTTCAGGAGA...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430379.5 |
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| CDS-3UTR CAA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACATCTGTAATAAGCACTaGATCCGTTCTCCAGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: QNPTINSLSPPRHICSIHICNKH*IRSPGV Trigger: GACTCCTGGAGAACGGATCAAGTGCTTATTACAGAT...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319017.5 |
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| CDS-3UTR CAA 90 bp | CAAAATCCAACGATTAACAGTCTATCTCCTCCTAGGCATATATGCTCAATCCACACTGCATTGAACCCTTaGTACAAGGATGTGACTCCT | + |
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Preference number: 5 (lower is better) Translates to: QNPTINSLSPPRHICSIHTALNP*YKDVTP Trigger: AGGAGTCACATCCTTGTACAAAGGGTTCAATGCAGT...GTGGATTGAGCATATATGCCTAGGAGGAGATAGACTGTTAATCGTTGGATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319017.5 ENST00000430379.5 |
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