Pregenerated sensors for SLC25A11 (Homo sapiens)
Ensembl gene IDs: ENSG00000108528Ensembl transcript IDs: ENST00000225665.12, ENST00000544061.6, ENST00000570543.1, ENST00000574710.1, ENST00000576951.1
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGGAGGAAGGGCCACATCTCCCTCTGCAGGCCCTTTGACCATCTTGATGGCTTCCCTTGGTTTCCCCACTaGCAAAGGGGATCTTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GRKGHISLCRPFDHLDGFPWFPH*QRGSSA Trigger: AGCAGAAGATCCCCTTTGTCAGTGGGGAAACCAAGG...GAAGCCATCAAGATGGTCAAAGGGCCTGCAGAGGGAGATGTGGCCCTTCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CCA 90 bp | CCCCCAGGGCGCAGTGGCTATAGGCGCAGCAGGCGAGTGGGAGCCCCCGGCCGCACCAGGTCCAGGGGCTaGACAAAAACTGTAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PPGRSGYRRSRRVGAPGRTRSRG*TKTVAP Trigger: GGGAGCTACAGTTTTTGTCCAGCCCCTGGACCTGGT...GCGGCCGGGGGCTCCCACTCGCCTGCTGCGCCTATAGCCACTGCGCCCTGGGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CCA 90 bp | CCCCCAGGGCGCAGTGGCTATAGGCGCAGCAGGCGAGTGGGAGCCCCCGGCCGCATCATCCGCATGTTCTaGATTCGGGTCTTGGCAATG | + |
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Preference number: 4 (lower is better) Translates to: PPGRSGYRRSRRVGAPGRIIRMF*IRVLAM Trigger: CATTGCCAAGACCCGAATCCAGAACATGCGGATGAT...GCGGCCGGGGGCTCCCACTCGCCTGCTGCGCCTATAGCCACTGCGCCCTGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CCA 90 bp | GGGAGGAAGGGCCACATCTCCCTCTGCAGGCCCTTTGACCATCTTGATGGCTTCGGCGCAGCAGGCGAGTaGGAGCCCCCGGCCGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GRKGHISLCRPFDHLDGFGAAGE*EPPAAS Trigger: TGAAGCGGCCGGGGGCTCCCACTCGCCTGCTGCGCC...GAAGCCATCAAGATGGTCAAAGGGCCTGCAGAGGGAGATGTGGCCCTTCCTCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR TCA 90 bp | GGGAGGAAGGGCCACATCTCCCTCTGCAGGCCCTTTGACCATCTTGATGGCTTCAGCCCCGCCACAGTGTaGGGACACCCTCTTCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GRKGHISLCRPFDHLDGFSPATV*GHPLPG Trigger: CCCGGGAAGAGGGTGTCCTCACACTGTGGCGGGGCT...GAAGCCATCAAGATGGTCAAAGGGCCTGCAGAGGGAGATGTGGCCCTTCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR TCA 90 bp | GGGGGAGGAAGGGCCACATCTCCCTCTGCAGGCCCTTTGACCATCTTGATGGCTCGTAGCGGACAACTTTaGACAGCACGTCCAGCCCGT | + |
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Preference number: 4 (lower is better) Translates to: GGGRATSPSAGPLTILMARSGQL*TARPAR Trigger: ACGGGCTGGACGTGCTGTTCAAAGTTGTCCGCTACG...AGCCATCAAGATGGTCAAAGGGCCTGCAGAGGGAGATGTGGCCCTTCCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CCA 90 bp | GGGAGGAAGGGCCACATCTCCCTCTGCAGGCCCTTTGACCATCTTGATGGCTTCCCACAAAGGCACCAGTaGCACCTGCGGTCATGCCAA | + |
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Preference number: 4 (lower is better) Translates to: GRKGHISLCRPFDHLDGFPQRHQ*HLRSCQ Trigger: TTGGCATGACCGCAGGTGCCACTGGTGCCTTTGTGG...GAAGCCATCAAGATGGTCAAAGGGCCTGCAGAGGGAGATGTGGCCCTTCCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGAAGGGCCACATCTCCCTCTGCAGGCCCTTTGACCATCTTGATGGCTAAGAGCCACTTCGGCTaGTGTTCCCACAAAGGCACC | + |
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Preference number: 4 (lower is better) Translates to: GGGRATSPSAGPLTILMAKSHFG*CSHKGT Trigger: GGTGCCTTTGTGGGAACACCAGCCGAAGTGGCTCTT...AGCCATCAAGATGGTCAAAGGGCCTGCAGAGGGAGATGTGGCCCTTCCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CCA 90 bp | CAAGCTGGAGCAGGGGGTAGAACAGACCAAGTCCTTTACCGCAGAGGAAGAAACACGGCGCTGGTCAGCTaGAAGCCGGCCATCGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: QAGAGGRTDQVLYRRGRNTALVS*KPAIGS Trigger: ACTGCCGATGGCCGGCTTCCAGCTGACCAGCGCCGT...GTTTCTTCCTCTGCGGTAAAGGACTTGGTCTGTTCTACCCCCTGCTCCAGCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR TCA 90 bp | GGGGGAGGAAGGGCCACATCTCCCTCTGCAGGCCCTTTGACCATCTTGATGGCTCCTTGGTTTCCCCACTaGCAAAGGGGATCTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GGGRATSPSAGPLTILMAPWFPH*QRGSSA Trigger: AGCAGAAGATCCCCTTTGTCAGTGGGGAAACCAAGG...AGCCATCAAGATGGTCAAAGGGCCTGCAGAGGGAGATGTGGCCCTTCCTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR GCA 90 bp | GGGAGGAAGGGCCACATCTCCCTCTGCAGGCCCTTTGACCATCTTGATGGCTTCCATCTTGATGGCTTCTaGTCCTCCCTGTCCCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GRKGHISLCRPFDHLDGFHLDGF*SSLSPQ Trigger: CTGAGGGGACAGGGAGGAGCAGAAGCCATCAAGATG...GAAGCCATCAAGATGGTCAAAGGGCCTGCAGAGGGAGATGTGGCCCTTCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CCA 90 bp | AGGAAGAAACCACACTGTGGAAGGGAAATAAATAGAGGGGTCCAGGGCAGCAGAGCCATCGCCACTCAATaGCCCTCGGCTCCGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: RKKPHCGREINRGVQGSRAIATQ*PSAPGP Trigger: GGGACCCGGAGCCGAGGGCCATTGAGTGGCGATGGC...TCTGCTGCCCTGGACCCCTCTATTTATTTCCCTTCCACAGTGTGGTTTCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGAAGGGCCACATCTCCCTCTGCAGGCCCTTTGACCATCTTGATGGCTTCTGGATTCGGGTCTTaGCAATGTCCACAGGCATGG | + |
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Preference number: 4 (lower is better) Translates to: GGGRATSPSAGPLTILMASGFGS*QCPQAW Trigger: CCATGCCTGTGGACATTGCCAAGACCCGAATCCAGA...AGCCATCAAGATGGTCAAAGGGCCTGCAGAGGGAGATGTGGCCCTTCCTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR TCA 90 bp | GAACAGACCAAGTCCTTTACCGCAGAGGAAGAAACCACACTGTGGAAGGGAAATCGAGCTGGGCAGCATTaGCGACGACGGCCCGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: EQTKSFTAEEETTLWKGNRAGQH*RRRPEP Trigger: TGGCTCGGGCCGTCGTCGTCAATGCTGCCCAGCTCG...ATTTCCCTTCCACAGTGTGGTTTCTTCCTCTGCGGTAAAGGACTTGGTCTGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR TCA 90 bp | CTGGAGCAGGGGGTAGAACAGACCAAGTCCTTTACCGCAGAGGAAGAAACCACAAGCCCTTCCACAGGCTaGAGAAGCCCTCGTAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: LEQGVEQTKSFTAEEETTSPSTG*RSPRSG Trigger: TCCGCTACGAGGGCTTCTTCAGCCTGTGGAAGGGCT...TGTGGTTTCTTCCTCTGCGGTAAAGGACTTGGTCTGTTCTACCCCCTGCTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR GCA 90 bp | CAAGCTGGAGCAGGGGGTAGAACAGACCAAGTCCTTTACCGCAGAGGAAGAAACGGCACCAGTGGCACCTaGGGTCATGCCAATCACAGC | + |
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Preference number: 4 (lower is better) Translates to: QAGAGGRTDQVLYRRGRNGTSGT*GHANHS Trigger: GCTGTGATTGGCATGACCGCAGGTGCCACTGGTGCC...GTTTCTTCCTCTGCGGTAAAGGACTTGGTCTGTTCTACCCCCTGCTCCAGCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR GCA 90 bp | GGGAGGCCAGAAATCCTCAGAAGTTTTCCAGCTCCCTGCAAGAATAGCCAAGGAGCCCCTCAGGCCTTCTaGCTTCAGGATACTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: GRPEILRSFPAPCKNSQGAPQAF*LQDTGE Trigger: CTCACCAGTATCCTGAAGGCAGAAGGCCTGAGGGGC...TCCTTGGCTATTCTTGCAGGGAGCTGGAAAACTTCTGAGGATTTCTGGCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR GCA 90 bp | AAGCTGGAGCAGGGGGTAGAACAGACCAAGTCCTTTACCGCAGAGGAAGAAACCACAGCCCAGTGTAAATaGCCCTCAGGCCTTCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: KLEQGVEQTKSFTAEEETTAQCK*PSGLLP Trigger: AGGCAGAAGGCCTGAGGGGCATTTACACTGGGCTGT...GGTTTCTTCCTCTGCGGTAAAGGACTTGGTCTGTTCTACCCCCTGCTCCAGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR GCA 90 bp | GGGAGGCCAGAAATCCTCAGAAGTTTTCCAGCTCCCTGCAAGAATAGCCAAGGACTGTCCCCTCAGCTCTaGCTTGGTTTCCCCACTGAC | + |
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Preference number: 4 (lower is better) Translates to: GRPEILRSFPAPCKNSQGLSPQL*LGFPTD Trigger: GTCAGTGGGGAAACCAAGGCAGAGCTGAGGGGACAG...TCCTTGGCTATTCTTGCAGGGAGCTGGAAAACTTCTGAGGATTTCTGGCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR GCA 90 bp | CAAGCTGGAGCAGGGGGTAGAACAGACCAAGTCCTTTACCGCAGAGGAAGAAACGGCCACATCTCCCTCTaGAGGCCCTTTGACCATCTT | + |
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Preference number: 4 (lower is better) Translates to: QAGAGGRTDQVLYRRGRNGHISL*RPFDHL Trigger: AAGATGGTCAAAGGGCCTGCAGAGGGAGATGTGGCC...GTTTCTTCCTCTGCGGTAAAGGACTTGGTCTGTTCTACCCCCTGCTCCAGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CCA 90 bp | CTGGAGCAGGGGGTAGAACAGACCAAGTCCTTTACCGCAGAGGAAGAAACCACATGTACTCTCGAGTCTTaGCCCCTTCCCCGCTCAACT | + |
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Preference number: 4 (lower is better) Translates to: LEQGVEQTKSFTAEEETTCTLES*PLPRST Trigger: AGTTGAGCGGGGAAGGGGCCAAGACTCGAGAGTACA...TGTGGTTTCTTCCTCTGCGGTAAAGGACTTGGTCTGTTCTACCCCCTGCTCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR TCA 90 bp | GAACAGACCAAGTCCTTTACCGCAGAGGAAGAAACCACACTGTGGAAGGGAAATGGCCGCTTCAGCCACTaGGGAAGAGACGCTTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: EQTKSFTAEEETTLWKGNGRFSH*GRDACR Trigger: CCTACAAGCGTCTCTTCCTCAGTGGCTGAAGCGGCC...ATTTCCCTTCCACAGTGTGGTTTCTTCCTCTGCGGTAAAGGACTTGGTCTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR GCA 90 bp | GGCCAGAAATCCTCAGAAGTTTTCCAGCTCCCTGCAAGAATAGCCAAGGACAGATGGCACCTGCGGTCATaGCAATCACAGCCTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GQKSSEVFQLPARIAKDRWHLRS*QSQPSA Trigger: TGCTGAAGGCTGTGATTGGCATGACCGCAGGTGCCA...TCTGTCCTTGGCTATTCTTGCAGGGAGCTGGAAAACTTCTGAGGATTTCTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR GCA 90 bp | GATTTGGGGCTGGTGTCATCAATCCAATTTATTAAGTCCTCAATGAGGGGGAGGCCTTCCCCGCTCAACTaGATCCGGTTCTTCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: DLGLVSSIQFIKSSMRGRPSPLN*IRFFTR Trigger: CCTGGTGAAGAACCGGATGCAGTTGAGCGGGGAAGG...CCTCCCCCTCATTGAGGACTTAATAAATTGGATTGATGACACCAGCCCCAAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR GCA 90 bp | GGGAGGCCAGAAATCCTCAGAAGTTTTCCAGCTCCCTGCAAGAATAGCCAAGGATCTGGCCCTGTCAGCTaGTGTGGCATGACAGATTTA | + |
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Preference number: 4 (lower is better) Translates to: GRPEILRSFPAPCKNSQGSGPVS*CGMTDL Trigger: TAAATCTGTCATGCCACAGCAGCTGACAGGGCCAGA...TCCTTGGCTATTCTTGCAGGGAGCTGGAAAACTTCTGAGGATTTCTGGCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CCA 90 bp | GGTAGAACAGACCAAGTCCTTTACCGCAGAGGAAGAAACCACACTGTGGAAGGGCCAGTAAGAACTGCTTaGATTGGGAGTAGGAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: GRTDQVLYRRGRNHTVEGPVRTA*IGSRRR Trigger: TCGCCTCCTACTCCCAATCCAAGCAGTTCTTACTGG...CCCTTCCACAGTGTGGTTTCTTCCTCTGCGGTAAAGGACTTGGTCTGTTCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CCA 90 bp | AAGCTGGAGCAGGGGGTAGAACAGACCAAGTCCTTTACCGCAGAGGAAGAAACCCCCTGTCAGCTGCTGTaGCATGACAGATTTATACAG | + |
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Preference number: 4 (lower is better) Translates to: KLEQGVEQTKSFTAEEETPCQLL*HDRFIQ Trigger: CTGTATAAATCTGTCATGCCACAGCAGCTGACAGGG...GGTTTCTTCCTCTGCGGTAAAGGACTTGGTCTGTTCTACCCCCTGCTCCAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR GCA 90 bp | GGGAGGCCAGAAATCCTCAGAAGTTTTCCAGCTCCCTGCAAGAATAGCCAAGGATTCTGCTGTCCTGTGTaGCCTGAAACTAAAACCCAG | + |
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Preference number: 4 (lower is better) Translates to: GRPEILRSFPAPCKNSQGFCCPV*PETKTQ Trigger: CTGGGTTTTAGTTTCAGGGCACACAGGACAGCAGAA...TCCTTGGCTATTCTTGCAGGGAGCTGGAAAACTTCTGAGGATTTCTGGCCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CCA 90 bp | GAACAGACCAAGTCCTTTACCGCAGAGGAAGAAACCACACTGTGGAAGGGAAATATACTGGTGAGGGCATaGAAGCTGGTTTTGTACTCT | + |
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Preference number: 4 (lower is better) Translates to: EQTKSFTAEEETTLWKGNILVRA*KLVLYS Trigger: AGAGTACAAAACCAGCTTCCATGCCCTCACCAGTAT...ATTTCCCTTCCACAGTGTGGTTTCTTCCTCTGCGGTAAAGGACTTGGTCTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CCA 90 bp | GATTTGGGGCTGGTGTCATCAATCCAATTTATTAAGTCCTCAATGAGGGGGAGGCTCCAGATTTGGGGCTaGTGTCATCAATCCAATTTA | + |
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Preference number: 4 (lower is better) Translates to: DLGLVSSIQFIKSSMRGRLQIWG*CHQSNL Trigger: TAAATTGGATTGATGACACCAGCCCCAAATCTGGAG...CCTCCCCCTCATTGAGGACTTAATAAATTGGATTGATGACACCAGCCCCAAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CAA 90 bp | GCAGAGCCCAGGCCCCCAGGGCGCAGTGGCTATAGGCGCAGCAGGCGAGTGGGAGCGAGCTGGGCAGCATaGACGACGACGGCCCGAGCC | + |
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Preference number: 5 (lower is better) Translates to: AEPRPPGRSGYRRSRRVGASWAA*TTTARA Trigger: GGCTCGGGCCGTCGTCGTCAATGCTGCCCAGCTCGC...TCCCACTCGCCTGCTGCGCCTATAGCCACTGCGCCCTGGGGGCCTGGGCTCTGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS CCA 90 bp | AGCCCAGGCCCCCAGGGCGCAGTGGCTATAGGCGCAGCAGGCGAGTaGGAGCCCCCGGCCGCTTCAGCCACTGAGGAAGAGACGCTTGTA | + |
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Preference number: 5 (lower is better) Translates to: SPGPQGAVAIGAAGE*EPPAASATEEETLV Trigger: TACAAGCGTCTCTTCCTCAGTGGCTGAAGCGGCCGGGGGCTCCCACTCGCCTGCTGCGCCTATAGCCACTGCGCCCTGGGGGCCTGGGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000225665.12 ENST00000574710.1 |
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| CDS-3UTR CAA 90 bp | CCCCCAGGGCGCAGTGGCTATAGGCGCAGCAGGCGAGTGGGAGCCCCCGGCCGCACGTCCAGCCCGTTCTaGTATTCCGGCTTCCCATCA | + |
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Preference number: 5 (lower is better) Translates to: PPGRSGYRRSRRVGAPGRTSSPF*YSGFPS Trigger: TGATGGGAAGCCGGAATACAAGAACGGGCTGGACGT...GCGGCCGGGGGCTCCCACTCGCCTGCTGCGCCTATAGCCACTGCGCCCTGGGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS CCA 90 bp | AATGGCCTGGAACCCCCTGCCGCCCGGCCGAGCTTAGCAATGCGCTaGGAAACTCAGCTGGCCCGGCGGGGGTTGTGCAACGACCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: NGLEPPAARPSLAMR*ETQLARRGLCNDPA Trigger: TGCAGGGTCGTTGCACAACCCCCGCCGGGCCAGCTGAGTTTCCCAGCGCATTGCTAAGCTCGGCCGGGCGGCAGGGGGTTCCAGGCCATT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS GCA 90 bp | GCGCTGGGAAACTCAGCTGGCCCGGCGGGGGTTGTGCAACGACCCTaGATGCAGTCCATAAGGGTCCTGCAATGGGGCCCTAGCAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: ALGNSAGPAGVVQRP*MQSIRVLQWGPSSP Trigger: TGGGCTGCTAGGGCCCCATTGCAGGACCCTTATGGACTGCATGCAGGGTCGTTGCACAACCCCCGCCGGGCCAGCTGAGTTTCCCAGCGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS TCA 90 bp | ACAGAAGTGGCACAAGATGTTGTCAGAGAAGTAGCCTGGGGGAGGTaGGGCGGGGGTGGCAGTCAGCTCAGAGGTGGCTCAGGCCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: TEVAQDVVREVAWGR*GGGGSQLRGGSGQA Trigger: AGCCTGGCCTGAGCCACCTCTGAGCTGACTGCCACCCCCGCCTCACCTCCCCCAGGCTACTTCTCTGACAACATCTTGTGCCACTTCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000570543.1 |
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| CDS CCA 90 bp | ACAAGATGTTGTCAGAGAAGTAGCCTGGGGGAGGTGAGGCGGGGGTaGCAGTCAGCTCAGAGGTGGCTCAGGCCAGGCTGGGAACTAAGG | + |
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Preference number: 5 (lower is better) Translates to: TRCCQRSSLGEVRRG*QSAQRWLRPGWELR Trigger: CCTTAGTTCCCAGCCTGGCCTGAGCCACCTCTGAGCTGACTGCCACCCCCGCCTCACCTCCCCCAGGCTACTTCTCTGACAACATCTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000570543.1 |
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| CDS TCA 90 bp | TATAGGCGCAGCAGGCGAGTGGGAGCCCCCGGCCGCTTCAGCCACTaGGGAAGAGACGCTTGTAGGCCTTGTTCATCTGCTCCAAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: YRRSRRVGAPGRFSH*GRDACRPCSSAPRR Trigger: TCTTCTTGGAGCAGATGAACAAGGCCTACAAGCGTCTCTTCCTCAGTGGCTGAAGCGGCCGGGGGCTCCCACTCGCCTGCTGCGCCTATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000225665.12 ENST00000574710.1 |
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| CDS TCA 90 bp | CCATGCAATGAAAGTGCTCCAAGCAGCTTCATGACAGTCAAGCAGTaGCCTGGGGCTGCACGCAGTCCGACACAGGGAGGGGAGGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: PCNESAPSSFMTVKQ*PGAARSPTQGGEEG Trigger: CCCTTCCTCCCCTCCCTGTGTCGGACTGCGTGCAGCCCCAGGTCACTGCTTGACTGTCATGAAGCTGCTTGGAGCACTTTCATTGCATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS GCA 90 bp | CAGCAGGCCAGCCGACAGCCCAGTGTAAATGCCCCTCAGGCCTTCTaGCTTCAGGATACTGGTGAGGGCATGGAAGCTGGTTTTGTACTC | + |
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Preference number: 5 (lower is better) Translates to: QQASRQPSVNAPQAF*LQDTGEGMEAGFVL Trigger: GAGTACAAAACCAGCTTCCATGCCCTCACCAGTATCCTGAAGGCAGAAGGCCTGAGGGGCATTTACACTGGGCTGTCGGCTGGCCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000225665.12 ENST00000576951.1 |
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| CDS TCA 90 bp | TTGTCCAGTAGGGGCCATGCAATGAAAGTGCTCCAAGCAGCTTCATaGCAGTCAAGCAGTGACCTGGGGCTGCACGCAGTCCGACACAGG | + |
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Preference number: 5 (lower is better) Translates to: LSSRGHAMKVLQAAS*QSSSDLGLHAVRHR Trigger: CCTGTGTCGGACTGCGTGCAGCCCCAGGTCACTGCTTGACTGTCATGAAGCTGCTTGGAGCACTTTCATTGCATGGCCCCTACTGGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS CCA 90 bp | AGTGAAGGGCCAGGCATTCCAGATCTACCAGTGCCCACTGGAGCCTaGCAGCAAGAGGTTACAAAGGTCAGGGCCTGCCATGCGATTCAA | + |
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Preference number: 5 (lower is better) Translates to: SEGPGIPDLPVPTGA*QQEVTKVRACHAIQ Trigger: TTGAATCGCATGGCAGGCCCTGACCTTTGTAACCTCTTGCTGCCAGGCTCCAGTGGGCACTGGTAGATCTGGAATGCCTGGCCCTTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS-3UTR CAA 90 bp | GGGAGGCCAGAAATCCTCAGAAGTTTTCCAGCTCCCTGCAAGAATAGCCAAGGAGGCCCTTTGACCATCTaGATGGCTTCTGCTCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: GRPEILRSFPAPCKNSQGGPLTI*MASAPP Trigger: GGGAGGAGCAGAAGCCATCAAGATGGTCAAAGGGCC...TCCTTGGCTATTCTTGCAGGGAGCTGGAAAACTTCTGAGGATTTCTGGCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CAA 90 bp | GGGAGGCCAGAAATCCTCAGAAGTTTTCCAGCTCCCTGCAAGAATAGCCAAGGACCCCCAAACAGGAACTaGACGGACTTAGGGGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: GRPEILRSFPAPCKNSQGPPNRN*TDLGEV Trigger: TACCTCCCCTAAGTCCGTCAAGTTCCTGTTTGGGGG...TCCTTGGCTATTCTTGCAGGGAGCTGGAAAACTTCTGAGGATTTCTGGCCTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CAA 90 bp | GGCCAGAAATCCTCAGAAGTTTTCCAGCTCCCTGCAAGAATAGCCAAGGACAGATTGTACTCTCGAGTCTaGGCCCCTTCCCCGCTCAAC | + |
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Preference number: 5 (lower is better) Translates to: GQKSSEVFQLPARIAKDRLYSRV*APSPLN Trigger: GTTGAGCGGGGAAGGGGCCAAGACTCGAGAGTACAA...TCTGTCCTTGGCTATTCTTGCAGGGAGCTGGAAAACTTCTGAGGATTTCTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CAA 90 bp | CTGGAGCAGGGGGTAGAACAGACCAAGTCCTTTACCGCAGAGGAAGAAACCACATTCTGGATTCGGGTCTaGGCAATGTCCACAGGCATG | + |
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Preference number: 5 (lower is better) Translates to: LEQGVEQTKSFTAEEETTFWIRV*AMSTGM Trigger: CATGCCTGTGGACATTGCCAAGACCCGAATCCAGAA...TGTGGTTTCTTCCTCTGCGGTAAAGGACTTGGTCTGTTCTACCCCCTGCTCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CAA 90 bp | AGGAAGAAACCACACTGTGGAAGGGAAATAAATAGAGGGGTCCAGGGCAGCAGACCCCTCAGCTCTGCCTaGGTTTCCCCACTGACAAAG | + |
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Preference number: 5 (lower is better) Translates to: RKKPHCGREINRGVQGSRPLSSA*VSPLTK Trigger: CTTTGTCAGTGGGGAAACCAAGGCAGAGCTGAGGGG...TCTGCTGCCCTGGACCCCTCTATTTATTTCCCTTCCACAGTGTGGTTTCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS-3UTR CAA 90 bp | GGGAGGCCAGAAATCCTCAGAAGTTTTCCAGCTCCCTGCAAGAATAGCCAAGGACCCTCTGCAGGCCCTTaGACCATCTTGATGGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: GRPEILRSFPAPCKNSQGPSAGP*TILMAS Trigger: AGAAGCCATCAAGATGGTCAAAGGGCCTGCAGAGGG...TCCTTGGCTATTCTTGCAGGGAGCTGGAAAACTTCTGAGGATTTCTGGCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS GCA 90 bp | CACTGGAGCCTGGCAGCAAGAGGTTACAAAGGTCAGGGCCTGCCATaGGATTCAAGAATCAGGATGCTGGTGAGCATGTGTATAAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: HWSLAARGYKGQGLP*DSRIRMLVSMCIRV Trigger: GACTCTTATACACATGCTCACCAGCATCCTGATTCTTGAATCGCATGGCAGGCCCTGACCTTTGTAACCTCTTGCTGCCAGGCTCCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS TCA 90 bp | TGCAACGGGTCTGAAAAGTCTAGTTGTCCAGTAGGGGCCATGCAATaGAAGTGCTCCAAGCAGCTTCATGACAGTCAAGCAGTGACCTGG | + |
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Preference number: 5 (lower is better) Translates to: CNGSEKSSCPVGAMQ*KCSKQLHDSQAVTW Trigger: CCAGGTCACTGCTTGACTGTCATGAAGCTGCTTGGAGCACTTTCATTGCATGGCCCCTACTGGACAACTAGACTTTTCAGACCCGTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS GCA 90 bp | AGGATGCTGGTGAGCATGTGTATAAGAGTCTATATGTACACCAAGTaGAACGGGTCTGAAAAGTCTAGTTGTCCAGTAGGGGCCATGCAA | + |
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Preference number: 5 (lower is better) Translates to: RMLVSMCIRVYMYTK*NGSEKSSCPVGAMQ Trigger: TTGCATGGCCCCTACTGGACAACTAGACTTTTCAGACCCGTTGCACTTGGTGTACATATAGACTCTTATACACATGCTCACCAGCATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS-3UTR CAA 90 bp | TCTCCAGATTTGGGGCTGGTGTCATCAATCCAATTTATTAAGTCCTCAATGAGGGCATGGAAGCTGGTTTaGTACTCTCGAGTCTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: SPDLGLVSSIQFIKSSMRAWKLV*YSRVLA Trigger: GGCCAAGACTCGAGAGTACAAAACCAGCTTCCATGC...CCTCATTGAGGACTTAATAAATTGGATTGATGACACCAGCCCCAAATCTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225665.12 |
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| CDS GCA 72 bp | CCATCGCCACTCAATGGCCCTCGGCTCCGGGTCCCGTaGGCGCGCGGCCCCGCTCGCGCCCAAGGTGACACC | + |
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Preference number: 6 (lower is better) Translates to: PSPLNGPRLRVP*ARGPARAQGDT Trigger: GGTGTCACCTTGGGCGCGAGCGGGGCCGCGCGCGCACGGGACCCGGAGCCGAGGGCCATTGAGTGGCGATGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000225665.12 ENST00000544061.6 ENST00000574710.1 |
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| CDS CCA 72 bp | CCCCAGGGCGCAGTGGCTATAGGCGCAGCAGGCGAGTaGGAGCCCCCGGCCGCTTCAGCCACTGAGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: PQGAVAIGAAGE*EPPAASATEEE Trigger: CTCTTCCTCAGTGGCTGAAGCGGCCGGGGGCTCCCACTCGCCTGCTGCGCCTATAGCCACTGCGCCCTGGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000225665.12 ENST00000574710.1 |
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| CDS CCA 72 bp | GAACCCCCTGCCGCCCGGCCGAGCTTAGCAATGCGCTaGGAAACTCAGCTGGCCCGGCGGGGGTTGTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: EPPAARPSLAMR*ETQLARRGLCN Trigger: GTTGCACAACCCCCGCCGGGCCAGCTGAGTTTCCCAGCGCATTGCTAAGCTCGGCCGGGCGGCAGGGGGTTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS TCA 72 bp | CCCATCGGGGAACTCGCAATACGCTGGAGATCGCGCTaGCCCCGTGCCGGCACAGTTCACTGCAACAGACCC | + |
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Preference number: 6 (lower is better) Translates to: PIGELAIRWRSR*PRAGTVHCNRP Trigger: GGGTCTGTTGCAGTGAACTGTGCCGGCACGGGGTCAGCGCGATCTCCAGCGTATTGCGAGTTCCCCGATGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS TCA 72 bp | TGTAGGTGGCCTGACGCAGCAGGCCAGCCGACAGCCTaGGGAGCAGAGGGGTCAGCATATCAGGCCAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: CRWPDAAGQPTA*GAEGSAYQAKV Trigger: GACCTTGGCCTGATATGCTGACCCCTCTGCTCCTCAGGCTGTCGGCTGGCCTGCTGCGTCAGGCCACCTACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS TCA 72 bp | AGCAGGCGAGTGGGAGCCCCCGGCCGCTTCAGCCACTaGGGAAGAGACGCTTGTAGGCCTTGTTCATCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SRRVGAPGRFSH*GRDACRPCSSA Trigger: AGCAGATGAACAAGGCCTACAAGCGTCTCTTCCTCAGTGGCTGAAGCGGCCGGGGGCTCCCACTCGCCTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000225665.12 ENST00000574710.1 |
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| CDS TCA 72 bp | CCGTGCCGGCACAGTTCACTGCAACAGACCCAGAGATaGACCGGGCCCGGTTCCTTTTGCCCTTCCCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PCRHSSLQQTQR*TGPGSFCPSLP Trigger: AGGAAGGGAAGGGCAAAAGGAACCGGGCCCGGTTCATCTCTGGGTCTGTTGCAGTGAACTGTGCCGGCACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS CCA 72 bp | TGCTCCAAGCAGCTTCATGACAGTCAAGCAGTGACCTaGGGCTGCACGCAGTCCGACACAGGGAGGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: CSKQLHDSQAVT*GCTQSDTGRGG Trigger: TCCTCCCCTCCCTGTGTCGGACTGCGTGCAGCCCCAGGTCACTGCTTGACTGTCATGAAGCTGCTTGGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS TCA 72 bp | GAAAGTGCTCCAAGCAGCTTCATGACAGTCAAGCAGTaGCCTGGGGCTGCACGCAGTCCGACACAGGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: ESAPSSFMTVKQ*PGAARSPTQGG Trigger: CCCTCCCTGTGTCGGACTGCGTGCAGCCCCAGGTCACTGCTTGACTGTCATGAAGCTGCTTGGAGCACTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS CCA 72 bp | GAGCCACTTCGGCTGGTGTTCCCACAAAGGCACCAGTaGCACCTGCGGTCATGCCAATCACAGCCTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: EPLRLVFPQRHQ*HLRSCQSQPSA Trigger: TGCTGAAGGCTGTGATTGGCATGACCGCAGGTGCCACTGGTGCCTTTGTGGGAACACCAGCCGAAGTGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000225665.12 ENST00000544061.6 ENST00000574710.1 ENST00000576951.1 |
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| CDS CCA 72 bp | CAACGACCCTGCATGCAGTCCATAAGGGTCCTGCAATaGGGCCCTAGCAGCCCATCGGGGAACTCGCAATAC | + |
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Preference number: 6 (lower is better) Translates to: QRPCMQSIRVLQ*GPSSPSGNSQY Trigger: GTATTGCGAGTTCCCCGATGGGCTGCTAGGGCCCCATTGCAGGACCCTTATGGACTGCATGCAGGGTCGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS CAA 90 bp | AGGCCTTCTGCCTTCAGGATACTGGTGAGGGCATGGAAGCTGGTTTaGTACTCTCGAGTCTTGGCCCCTTCCCCGCTCAACTGCATCCGG | + |
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Preference number: 6 (lower is better) Translates to: RPSAFRILVRAWKLV*YSRVLAPSPLNCIR Trigger: CCGGATGCAGTTGAGCGGGGAAGGGGCCAAGACTCGAGAGTACAAAACCAGCTTCCATGCCCTCACCAGTATCCTGAAGGCAGAAGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000225665.12 ENST00000574710.1 ENST00000576951.1 |
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| CDS GCA 72 bp | AGCCGACAGCCCAGTGTAAATGCCCCTCAGGCCTTCTaGCTTCAGGATACTGGTGAGGGCATGGAAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SRQPSVNAPQAF*LQDTGEGMEAG Trigger: ACCAGCTTCCATGCCCTCACCAGTATCCTGAAGGCAGAAGGCCTGAGGGGCATTTACACTGGGCTGTCGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000225665.12 ENST00000576951.1 |
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| CDS GCA 72 bp | GGTGGAGTGAAGGGCCAGGCATTCCAGATCTACCAGTaGCCACTGGAGCCTGGCAGCAAGAGGTTACAAAGG | + |
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Preference number: 6 (lower is better) Translates to: GGVKGQAFQIYQ*PLEPGSKRLQR Trigger: CCTTTGTAACCTCTTGCTGCCAGGCTCCAGTGGGCACTGGTAGATCTGGAATGCCTGGCCCTTCACTCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS CCA 72 bp | CCAGGCATTCCAGATCTACCAGTGCCCACTGGAGCCTaGCAGCAAGAGGTTACAAAGGTCAGGGCCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PGIPDLPVPTGA*QQEVTKVRACH Trigger: ATGGCAGGCCCTGACCTTTGTAACCTCTTGCTGCCAGGCTCCAGTGGGCACTGGTAGATCTGGAATGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS TCA 72 bp | AGGGGCCATGCAATGAAAGTGCTCCAAGCAGCTTCATaGCAGTCAAGCAGTGACCTGGGGCTGCACGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: RGHAMKVLQAAS*QSSSDLGLHAV Trigger: GACTGCGTGCAGCCCCAGGTCACTGCTTGACTGTCATGAAGCTGCTTGGAGCACTTTCATTGCATGGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS GCA 72 bp | GCCCCAATACCCAGTGTAAATGCCCCTCAGGCCTTCTaGCTTCAGGATACTGGTGAGGGCATGGAAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: APIPSVNAPQAF*LQDTGEGMEAG Trigger: ACCAGCTTCCATGCCCTCACCAGTATCCTGAAGGCAGAAGGCCTGAGGGGCATTTACACTGGGTATTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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| CDS CAA 72 bp | GCCTTCAGGATACTGGTGAGGGCATGGAAGCTGGTTTaGTACTCTCGAGTCTTGGCCCCTTCCCCGCTCAAC | + |
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Preference number: 6 (lower is better) Translates to: AFRILVRAWKLV*YSRVLAPSPLN Trigger: GTTGAGCGGGGAAGGGGCCAAGACTCGAGAGTACAAAACCAGCTTCCATGCCCTCACCAGTATCCTGAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000225665.12 ENST00000574710.1 ENST00000576951.1 |
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| CDS CCA 72 bp | CTCAGGCCTTCTGCCTTCAGGATACTGGTGAGGGCATaGAAGCTGGTTTTGTACTCTCGAGTCTTGGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: LRPSAFRILVRA*KLVLYSRVLAP Trigger: AGGGGCCAAGACTCGAGAGTACAAAACCAGCTTCCATGCCCTCACCAGTATCCTGAAGGCAGAAGGCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000225665.12 ENST00000574710.1 ENST00000576951.1 |
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| CDS GCA 72 bp | CTGGCAGCAAGAGGTTACAAAGGTCAGGGCCTGCCATaGGATTCAAGAATCAGGATGCTGGTGAGCATGTGT | + |
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Preference number: 6 (lower is better) Translates to: LAARGYKGQGLP*DSRIRMLVSMC Trigger: ACACATGCTCACCAGCATCCTGATTCTTGAATCGCATGGCAGGCCCTGACCTTTGTAACCTCTTGCTGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574710.1 |
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