RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC25A10 (Homo sapiens)

Ensembl gene IDs: ENSG00000183048

Ensembl transcript IDs: ENST00000331531.9, ENST00000350690.10, ENST00000545862.5, ENST00000570310.5, ENST00000571876.1, ENST00000574129.5, ENST00000574884.5

Found 473 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGTTAAAGCCACTGCAGGGCAGGCAGCGGTGCGCGGGACCTCGGTaGCCCTCGACCCTCACCCACAATGGCTCCAGAACCACCCTGGGC +
Preference number: 1 (lower is better)
Translates to: LLKPLQGRQRCAGPR*PSTLTHNGSRTTLG
Trigger: GCCCAGGGTGGTTCTGGAGCCATTGTGGGTGAGGGTCGAGGGCCACCGAGGTCCCGCGCACCGCTGCCTGCCCTGCAGTGGCTTTAACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR GCA 90 bp CGGAGCCCAGCAACACCTTCTCGTGGAAGGGGAGAGGCCCCTGGCTaGCCTTGGCCACACGGTCCCGCACAGTCTCGTAGATGGCGAACC +
Preference number: 1 (lower is better)
Translates to: RSPATPSRGRGEAPG*PWPHGPAQSRRWRT
Trigger: GGTTCGCCATCTACGAGACTGTGCGGGACCGTGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCTGGGCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR CCA 90 bp AAGCCTCCAGCTAAACCGCTGACGGAGCCCAGCAACACCTTCTCGTaGAAGGGGAGAGGCCCCTGGCTGCCCTTGGCCACACGGTCCCGC +
Preference number: 1 (lower is better)
Translates to: KPPAKPLTEPSNTFS*KGRGPWLPLATRSR
Trigger: GCGGGACCGTGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCTGGGCTCCGTCAGCGGTTTAGCTGGAGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR GCA 90 bp CAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTaGGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGG +
Preference number: 1 (lower is better)
Translates to: QALACGLRCLFIPPS*GVSRGVAAARGHGR
Trigger: CCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR GCA 90 bp TGTAGAGTGCCAGGATGCCGTCGGTACGCACCACCCGCAGCGCCATaGCCGTCATGCGCAGCTTCACCTCCTGCTGCGTCTGCAGATGCA +
Preference number: 1 (lower is better)
Translates to: CRVPGCRRYAPPAAP*PSCAASPPAASADA
Trigger: TGCATCTGCAGACGCAGCAGGAGGTGAAGCTGCGCATGACGGGCATGGCGCTGCGGGTGGTGCGTACCGACGGCATCCTGGCACTCTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR CCA 90 bp CCAGCAACACCTTCTCGTGGAAGGGGAGAGGCCCCTGGCTGCCCTTaGCCACACGGTCCCGCACAGTCTCGTAGATGGCGAACCGAGTCA +
Preference number: 1 (lower is better)
Translates to: PATPSRGRGEAPGCP*PHGPAQSRRWRTES
Trigger: TGACTCGGTTCGCCATCTACGAGACTGTGCGGGACCGTGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR GCA 90 bp GCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTaGAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGCAGAC +
Preference number: 1 (lower is better)
Translates to: ALLVHPTQLRGLAGS*SCPRTWKVWLLSAD
Trigger: GTCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR CCA 90 bp ACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATaGAAGGTCTGGTTGCTCTCAGCAGACACGAAGTGCAGAGCTAGC +
Preference number: 1 (lower is better)
Translates to: TQLRGLAGSCSCPRT*KVWLLSADTKCRAS
Trigger: GCTAGCTCTGCACTTCGTGTCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR GCA 90 bp CTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTaGCCGAGGACATGGAAGGTCTGGTTGCTCTCAGCAGACACGAAG +
Preference number: 1 (lower is better)
Translates to: LVHPTQLRGLAGSCS*PRTWKVWLLSADTK
Trigger: CTTCGTGTCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR CCA 90 bp CGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTaGTTGCTCTCAGCAGACACGAAGTGCAGAGCTAGCACTTGGGTG +
Preference number: 1 (lower is better)
Translates to: RGLAGSCSCPRTWKV*LLSADTKCRASTWV
Trigger: CACCCAAGTGCTAGCTCTGCACTTCGTGTCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR CCA 90 bp AGCAACAGCCAGGCTGCACCCACACTCTGCCACCCAAGTCCTCGATaGAAAGTGCTGGAAGATGCTGCTTTGGGCATCGGGGGCAGGAGG +
Preference number: 1 (lower is better)
Translates to: SNSQAAPTLCHPSPR*KVLEDAALGIGGRR
Trigger: CCTCCTGCCCCCGATGCCCAAAGCAGCATCTTCCAGCACTTTCCATCGAGGACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCTGTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR CCA 90 bp GGTGCTGGGCTTGGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTaGCAGCCCAGCCATTCCCACGGCTGGTCAGGATGGCACTTTGAT +
Preference number: 1 (lower is better)
Translates to: GAGLGTLWKNLACLA*QPSHSHGWSGWHFD
Trigger: ATCAAAGTGCCATCCTGACCAGCCGTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCCAAGCCCAGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR TCA 90 bp TCTGGTTGCTCTCAGCAGACACGAAGTGCAGAGCTAGCACTTGGGTaGGCAACAGCCAGGCTGCACCCACACTCTGCCACCCAAGTCCTC +
Preference number: 1 (lower is better)
Translates to: SGCSQQTRSAELALG*ATARLHPHSATQVL
Trigger: GAGGACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCTGTTGCTCACCCAAGTGCTAGCTCTGCACTTCGTGTCTGCTGAGAGCAACCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR GCA 90 bp TGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGCAGACACGAAGTaGAGAGCTAGCACTTGGGTGAGCAACAGCCAGGCTGCACCCACA +
Preference number: 1 (lower is better)
Translates to: CPRTWKVWLLSADTK*RASTWVSNSQAAPT
Trigger: TGTGGGTGCAGCCTGGCTGTTGCTCACCCAAGTGCTAGCTCTGCACTTCGTGTCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR CCA 90 bp AAGGTCTGGTTGCTCTCAGCAGACACGAAGTGCAGAGCTAGCACTTaGGTGAGCAACAGCCAGGCTGCACCCACACTCTGCCACCCAAGT +
Preference number: 1 (lower is better)
Translates to: KVWLLSADTKCRAST*VSNSQAAPTLCHPS
Trigger: ACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCTGTTGCTCACCCAAGTGCTAGCTCTGCACTTCGTGTCTGCTGAGAGCAACCAGACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR CCA 90 bp TCCCCCTTGGAGTTCATCAGGCGAGTCTTCAGCACATCCAGGGGCTaGCACAGGAACGTGGCACATCCACCTGCAATAAAGCTGGCGACA +
Preference number: 1 (lower is better)
Translates to: SPLEFIRRVFSTSRG*HRNVAHPPAIKLAT
Trigger: TGTCGCCAGCTTTATTGCAGGTGGATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGATGAACTCCAAGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR GCA 90 bp AGAGCTAGCACTTGGGTGAGCAACAGCCAGGCTGCACCCACACTCTaGCACCCAAGTCCTCGATGGAAAGTGCTGGAAGATGCTGCTTTG +
Preference number: 1 (lower is better)
Translates to: RASTWVSNSQAAPTL*HPSPRWKVLEDAAL
Trigger: CAAAGCAGCATCTTCCAGCACTTTCCATCGAGGACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCTGTTGCTCACCCAAGTGCTAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR TCA 90 bp CACAGGAACGTGGCACATCCACCTGCAATAAAGCTGGCGACAAAGTaGGTGAAGATGTTGTCAGAGAGGTACCCGGTGCTAAGGACCAGC +
Preference number: 1 (lower is better)
Translates to: HRNVAHPPAIKLATK*VKMLSERYPVLRTS
Trigger: GCTGGTCCTTAGCACCGGGTACCTCTCTGACAACATCTTCACTCACTTTGTCGCCAGCTTTATTGCAGGTGGATGTGCCACGTTCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
3UTR GCA 90 bp TGCGTCTGCAGATGCACCTGGCCTTCACGCAGCGACCAGCATTGTTaGTCATTAGTAAAGCCAGTCCCCTCAAAGGCTGCTGGAATACAA +
Preference number: 1 (lower is better)
Translates to: CVCRCTWPSRSDQHC*SLVKPVPSKAAGIQ
Trigger: TTGTATTCCAGCAGCCTTTGAGGGGACTGGCTTTACTAATGAGCAACAATGCTGGTCGCTGCGTGAAGGCCAGGTGCATCTGCAGACGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR CCA 90 bp GAGCCCAGCAACACCTTCTCGTGGAAGGGGAGAGGCCCCTGGCTGCCCTTGGCCGCTGCGGAGGACGGGTaGCCACGGCCAGGGAGGTCG +
Preference number: 2 (lower is better)
Translates to: EPSNTFSWKGRGPWLPLAAAEDG*PRPGRS
Trigger: CGACCTCCCTGGCCGTGGCCACCCGTCCTCCGCAGC...GGCCAAGGGCAGCCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCTGGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR GCA 90 bp CCAGCGACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGACAGCAGGGGCCTGCTaGGGAGGACGGGTGGCCACG +
Preference number: 2 (lower is better)
Translates to: PATREAEDAASAPSDSLSTAGAC*GGRVAT
Trigger: CGTGGCCACCCGTCCTCCGCAGCAGGCCCCTGCTGT...CGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGTCGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR GCA 90 bp CAGCCGGGAGAGCCTGGTAGCCAGAGCGGGGGTGGTGCAGCTACAGCTGAGAGGACAGCAGGGGCCTGCTaGGGAGGACGGGTGGCCACG +
Preference number: 2 (lower is better)
Translates to: QPGEPGSQSGGGAATAERTAGAC*GGRVAT
Trigger: CGTGGCCACCCGTCCTCCGCAGCAGGCCCCTGCTGT...CCTCTCAGCTGTAGCTGCACCACCCCCGCTCTGGCTACCAGGCTCTCCCGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000574129.5
3UTR-3UTR CCA 90 bp AGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGGCTGCGGAGGACGGGTaGCCACGGCCAGGGAGGTCG +
Preference number: 2 (lower is better)
Translates to: REAEDAASAPSDSLSGRRAAEDG*PRPGRS
Trigger: CGACCTCCCTGGCCGTGGCCACCCGTCCTCCGCAGC...CCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR GCA 90 bp ATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAGTTCCCCTGAGGAGCTaGCAGCGGGAGAGGGGCAAG +
Preference number: 2 (lower is better)
Translates to: IPPSCGVSRGVAAARGHGVPLRS*QRERGK
Trigger: CTTGCCCCTCTCCCGCTGGCAGCTCCTCAGGGGAAC...TCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR CAA 90 bp CCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTaGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCT +
Preference number: 2 (lower is better)
Translates to: PWATPSQALACGLRC*FIPPSCGVSRGVAA
Trigger: AGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR-3UTR TCA 90 bp AGCGTGTCTGGCCTGGCAGCCCAGCCATTCCCACGGCTGGTCAGGATGGCACTTGCACGGTGTGGGGGATaGGGCGGATGCCAGCTGGGA +
Preference number: 2 (lower is better)
Translates to: SVSGLAAQPFPRLVRMALARCGG*GGCQLG
Trigger: TCCCAGCTGGCATCCGCCTCATCCCCCACACCGTGC...AAGTGCCATCCTGACCAGCCGTGGGAATGGCTGGGCTGCCAGGCCAGACACGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR CCA 90 bp CTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGCTAGCGTGTCTGGCCTaGCAGCCCAGCCATTCCCAC +
Preference number: 2 (lower is better)
Translates to: LVHPTQLRGLAGSCSCPRLACLA*QPSHSH
Trigger: GTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAG...CCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR GCA 90 bp GGCGCTCAGGCCGCTGTAGAGTGCCAGGATGCCGTCGGTACGCACCACCCGCAGACCTCCTGCTGCGTCTaGAGATGCACCTGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: GAQAAVECQDAVGTHHPQTSCCV*RCTWPS
Trigger: TGAAGGCCAGGTGCATCTGCAGACGCAGCAGGAGGT...CTGCGGGTGGTGCGTACCGACGGCATCCTGGCACTCTACAGCGGCCTGAGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR CCA 90 bp CCAGCAACACCTTCTCGTGGAAGGGGAGAGGCCCCTGGCTGCCCTTGGCCACACCTAAGGCCCCTCGGCTaGATGCCATGGTTGCACCCG +
Preference number: 2 (lower is better)
Translates to: PATPSRGRGEAPGCPWPHLRPLG*MPWLHP
Trigger: CGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAG...GTGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR TCA 90 bp CGAGGCCCTTGTAAAAGGCCAGAGGCCCGAGCTTCGCTGTCTCCACGGCGCAGTTGGTGCAGCTACAGCTaGGAGGGGACGAGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: RGPCKRPEARASLSPRRSWCSYS*EGTRPG
Trigger: TCCTGGCCTCGTCCCCTCTCAGCTGTAGCTGCACCA...ACTGCGCCGTGGAGACAGCGAAGCTCGGGCCTCTGGCCTTTTACAAGGGCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR TCA 90 bp CCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAACGCAGGCACAATCCCTaGAGACAGAGACCGCCTGCT +
Preference number: 2 (lower is better)
Translates to: PGRQRMQHPPRRTPCRGERRHNP*RQRPPA
Trigger: AGCAGGCGGTCTCTGTCTTCAGGGATTGTGCCTGCG...TTCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR-3UTR GCA 90 bp AGCCAGGCTGCACCCACACTCTGCCACCCAAGTCCTCGATGGAAAGTGCTGGAAGGCAAGGCCACGCAGTaGCCAGCCGGGAGAGCCTGG +
Preference number: 2 (lower is better)
Translates to: SQAAPTLCHPSPRWKVLEGKATQ*PAGRAW
Trigger: CCAGGCTCTCCCGGCTGGGCACTGCGTGGCCTTGCC...TTCCAGCACTTTCCATCGAGGACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR GCA 90 bp CGAGGCCCTTGTAAAAGGCCAGAGGCCCGAGCTTCGCTGTCTCCACGGCGCAGTGCGCCATGCCCGTCATaGGCAGCTTCACCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: RGPCKRPEARASLSPRRSAPCPS*AASPPA
Trigger: AGCAGGAGGTGAAGCTGCGCATGACGGGCATGGCGC...ACTGCGCCGTGGAGACAGCGAAGCTCGGGCCTCTGGCCTTTTACAAGGGCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR GCA 90 bp GAGCCCAGCAACACCTTCTCGTGGAAGGGGAGAGGCCCCTGGCTGCCCTTGGCCAGTAGGTCATCTGTCTaGACAGCGAGGCGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: EPSNTFSWKGRGPWLPLASRSSV*TARRSG
Trigger: GCCTGAGCGCCTCGCTGTGCAGACAGATGACCTACT...GGCCAAGGGCAGCCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCTGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR CCA 90 bp GCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTTGGAAGATGCTGCTTTaGGCATCGGGGGCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: AAGSRGELQLPEDMEGLVWKMLL*ASGAGG
Trigger: GCCTCCTGCCCCCGATGCCCAAAGCAGCATCTTCCA...AACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR CCA 90 bp CGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGAGCTGCCCGAGGACATaGAAGGTCTGGTTGCTCTCA +
Preference number: 2 (lower is better)
Translates to: RRTPCRGEGPKEEPRPAWSCPRT*KVWLLS
Trigger: TGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCT...CCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR-3UTR GCA 90 bp ATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAGAAAGTGCTGGAAGATaGTGCTTTGGGCATCGGGGG +
Preference number: 2 (lower is better)
Translates to: IPPSCGVSRGVAAARGHGESAGR*CFGHRG
Trigger: CCCCCGATGCCCAAAGCAGCATCTTCCAGCACTTTC...TCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR GCA 90 bp GTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGGAGCAACAGCCAGGCTaGACCCACACTCTGCCACCC +
Preference number: 2 (lower is better)
Translates to: VSRGVAAARGHGRSGCSQEQQPG*THTLPP
Trigger: GGGTGGCAGAGTGTGGGTGCAGCCTGGCTGTTGCTC...CTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR GCA 90 bp AGCCCAGCGACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGGCTTGTGGTCTGCGTTaGTTGTTCATCCCACCCAGC +
Preference number: 2 (lower is better)
Translates to: SPATREAEDAASAPSDSLACGLR*LFIPPS
Trigger: GCTGGGTGGGATGAACAAGCAACGCAGACCACAAGC...CAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGTCGCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR-3UTR CCA 90 bp GGAGAGGCTTTGGCAAAACTAACTGTTAAAGCCACTGCAGGGCAGGCAGCGGTGGCTGCGGAGGACGGGTaGCCACGGCCAGGGAGGTCG +
Preference number: 2 (lower is better)
Translates to: GEALAKLTVKATAGQAAVAAEDG*PRPGRS
Trigger: CGACCTCCCTGGCCGTGGCCACCCGTCCTCCGCAGC...CACCGCTGCCTGCCCTGCAGTGGCTTTAACAGTTAGTTTTGCCAAAGCCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR CCA 90 bp GCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGTGCAGAGCTAGCACTTaGGTGAGCAACAGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: ACSSHPAAGSRGELQLPECRAST*VSNSQA
Trigger: AGCCTGGCTGTTGCTCACCCAAGTGCTAGCTCTGCA...CTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR CCA 90 bp CGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGCCAGGCACTCGCTTGTaGTCTGCGTTGCTTGTTCAT +
Preference number: 2 (lower is better)
Translates to: RRTPCRGEGPKEEPRPAWPGTRL*SALLVH
Trigger: ATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGG...CCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR-3UTR CCA 90 bp CCCGAGCTTCGCTGTCTCCACGGCGCAGTGGAAAACGCCCTGATACTCCCCCTTCAGGGCAGGGCCTGCTaGGCAGACTGTGCAAAGCCT +
Preference number: 2 (lower is better)
Translates to: PELRCLHGAVENALILPLQGRAC*ADCAKP
Trigger: AGGCTTTGCACAGTCTGCCCAGCAGGCCCTGCCCTG...AAGGGGGAGTATCAGGGCGTTTTCCACTGCGCCGTGGAGACAGCGAAGCTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR CAA 90 bp TGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTaGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: CVACSSHPAAGSRGE*QLPEDMEGLVALSR
Trigger: TCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR-3UTR TCA 90 bp GCTAGCACTTGGGTGAGCAACAGCCAGGCTGCACCCACACTCTGCCACCCAAGTTGGTGCAGCTACAGCTaGGAGGGGACGAGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: ASTWVSNSQAAPTLCHPSWCSYS*EGTRPG
Trigger: TCCTGGCCTCGTCCCCTCTCAGCTGTAGCTGCACCA...ACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCTGTTGCTCACCCAAGTGCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR GCA 90 bp CCAGCCATTCCCACGGCTGGTCAGGATGGCACTTTGATGCCAAAGTTTTTGCGTGGGACAGCAGGGGCCTaGTGCGGAGGACGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: PAIPTAGQDGTLMPKFLRGTAGA*CGGRVA
Trigger: GGCCACCCGTCCTCCGCAGCAGGCCCCTGCTGTCCC...ACGCAAAAACTTTGGCATCAAAGTGCCATCCTGACCAGCCGTGGGAATGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR GCA 90 bp CCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTGCTGCACCCACACTCTaGCACCCAAGTCCTCGATGG +
Preference number: 2 (lower is better)
Translates to: PGTRLWSALLVHPTQLRGAAPTL*HPSPRW
Trigger: CCATCGAGGACTTGGGTGGCAGAGTGTGGGTGCAGC...ACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR GCA 90 bp GCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGTCAGCAGACACGAAGTaGAGAGCTAGCACTTGGGTG +
Preference number: 2 (lower is better)
Translates to: ACSSHPAAGSRGELQLPESADTK*RASTWV
Trigger: CACCCAAGTGCTAGCTCTGCACTTCGTGTCTGCTGA...CTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR GCA 90 bp CAGCCGGGAGAGCCTGGTAGCCAGAGCGGGGGTGGTGCAGCTACAGCTGAGAGGTCAGCAGACACGAAGTaGAGAGCTAGCACTTGGGTG +
Preference number: 2 (lower is better)
Translates to: QPGEPGSQSGGGAATAERSADTK*RASTWV
Trigger: CACCCAAGTGCTAGCTCTGCACTTCGTGTCTGCTGA...CCTCTCAGCTGTAGCTGCACCACCCCCGCTCTGGCTACCAGGCTCTCCCGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR GCA 90 bp CCCGAGCTTCGCTGTCTCCACGGCGCAGTGGAAAACGCCCTGATACTCCCCCTTCGCAGCTTCACCTCCTaGTGCGTCTGCAGATGCACC +
Preference number: 2 (lower is better)
Translates to: PELRCLHGAVENALILPLRSFTS*CVCRCT
Trigger: GGTGCATCTGCAGACGCAGCAGGAGGTGAAGCTGCG...AAGGGGGAGTATCAGGGCGTTTTCCACTGCGCCGTGGAGACAGCGAAGCTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR GCA 90 bp GGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGAACGTGGCACATCCACCTGTGTAGAGTGCCAGGATaGCGTCGGTACGCACCACCC +
Preference number: 2 (lower is better)
Translates to: GESSAHPGAGTGTWHIHLCRVPG*RRYAPP
Trigger: GGGTGGTGCGTACCGACGGCATCCTGGCACTCTACA...CAGGTGGATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR CCA 90 bp GGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGCCCAGCCATTCCCACCTAGCGTGTCTGGCCTaGCAGCCCAGCCATTCCCAC +
Preference number: 2 (lower is better)
Translates to: GTLWKNLACLAWQPSHSHLACLA*QPSHSH
Trigger: GTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAG...GTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000574129.5
3UTR-3UTR CCA 90 bp GTGACTAAGGCCCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAGTCTCCTGCTAGCGTGTCTGGCCTaGCAGCCCAGCCATTCCCAC +
Preference number: 2 (lower is better)
Translates to: VTKAPRLDAMVAPENSLLLACLA*QPSHSH
Trigger: GTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAG...CAGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR CCA 90 bp CCAGCGACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGAGCAGGTGCTGGGCTTaGGACTCTTTGGAAGAACCT +
Preference number: 2 (lower is better)
Translates to: PATREAEDAASAPSDSLSSRCWA*DSLEEP
Trigger: AGGTTCTTCCAAAGAGTCCCAAGCCCAGCACCTGCT...CGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGTCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR CCA 90 bp AGCAACACCTTCTCGTGGAAGGGGAGAGGCCCCTGGCTGCCCTTGGCCACACGGGCACAGTCTCGTAGATaGCGAACCGAGTCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: SNTFSWKGRGPWLPLATRAQSRR*RTESGS
Trigger: ACTCCCTGACTCGGTTCGCCATCTACGAGACTGTGC...CCGTGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR CAA 90 bp GGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTaGCTCTCAGCAGACACGAAGTGCAGAGCTAGCACTTGGGTGAGC +
Preference number: 2 (lower is better)
Translates to: GLAGSCSCPRTWKVW*LSADTKCRASTWVS
Trigger: GCTCACCCAAGTGCTAGCTCTGCACTTCGTGTCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR TCA 90 bp GGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGCCCAGCCATTCCCACGAGACCGCCTGCTGGTaGGTGGAGAGGCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: GTLWKNLACLAWQPSHSHETACW*VERLWQ
Trigger: TTGCCAAAGCCTCTCCACTCACCAGCAGGCGGTCTC...GTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR TCA 90 bp TCCCCCTTGGAGTTCATCAGGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGCTCCAGCTAAACCGCTaGCGGAGCCCAGCAACACCT +
Preference number: 2 (lower is better)
Translates to: SPLEFIRRVFSTSRGWHRLQLNR*RSPATP
Trigger: AGGTGTTGCTGGGCTCCGTCAGCGGTTTAGCTGGAG...CCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGATGAACTCCAAGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR GCA 90 bp AGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTGCTGCACCCACACTCTaGCACCCAAGTCCTCGATGG +
Preference number: 2 (lower is better)
Translates to: RHSLVVCVACSSHPAAGSAAPTL*HPSPRW
Trigger: CCATCGAGGACTTGGGTGGCAGAGTGTGGGTGCAGC...AGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR GCA 90 bp CGGCATTTATTGATTGCAGCCCCCACAGAGCACACTGCCCTTCCCAGGTGGGGTGCGGGGAGTTGCAGCTaGCCGAGGACATGGAAGGTC +
Preference number: 2 (lower is better)
Translates to: RHLLIAAPTEHTALPRWGAGSCS*PRTWKV
Trigger: GACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGC...ACCCCACCTGGGAAGGGCAGTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR-3UTR GCA 90 bp TCATCTGTCTGCACAGCGAGGCGCTCAGGCCGCTGTAGAGTGCCAGGATGCCGTAGCTTCACCTCCTGCTaGGTCTGCAGATGCACCTGG +
Preference number: 2 (lower is better)
Translates to: SSVCTARRSGRCRVPGCRSFTSC*VCRCTW
Trigger: CCAGGTGCATCTGCAGACGCAGCAGGAGGTGAAGCT...ACGGCATCCTGGCACTCTACAGCGGCCTGAGCGCCTCGCTGTGCAGACAGATGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR CCA 90 bp GCTAGCACTTGGGTGAGCAACAGCCAGGCTGCACCCACACTCTGCCACCCAAGTTGGAAGATGCTGCTTTaGGCATCGGGGGCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: ASTWVSNSQAAPTLCHPSWKMLL*ASGAGG
Trigger: GCCTCCTGCCCCCGATGCCCAAAGCAGCATCTTCCA...ACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCTGTTGCTCACCCAAGTGCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR CCA 90 bp TCATCTGTCTGCACAGCGAGGCGCTCAGGCCGCTGTAGAGTGCCAGGATGCCGTCTCGGCTGGATGCCATaGTTGCACCCGAGAACAGTC +
Preference number: 2 (lower is better)
Translates to: SSVCTARRSGRCRVPGCRLGWMP*LHPRTV
Trigger: GACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAG...ACGGCATCCTGGCACTCTACAGCGGCCTGAGCGCCTCGCTGTGCAGACAGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR GCA 90 bp CCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGTCCTCGATGGAAAGTaGTGGAAGATGCTGCTTTGG +
Preference number: 2 (lower is better)
Translates to: PGRQRMQHPPRRTPCRGEVLDGK*WKMLLW
Trigger: CCAAAGCAGCATCTTCCAGCACTTTCCATCGAGGAC...TTCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR GCA 90 bp GAAGATGTTGTCAGAGAGGTACCCGGTGCTAAGGACCAGCTGCTTGGCCTGGTCGCGCATGGGCGTAGCTaGCGGGGACACAGAATGACC +
Preference number: 2 (lower is better)
Translates to: EDVVREVPGAKDQLLGLVAHGRS*RGHRMT
Trigger: GGTCATTCTGTGTCCCCGGCAGCTACGCCCATGCGC...GACCAGGCCAAGCAGCTGGTCCTTAGCACCGGGTACCTCTCTGACAACATCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574884.5
3UTR-3UTR GCA 90 bp GAAGATGTTGTCAGAGAGGTACCCGGTGCTAAGGACCAGCTGCTTGGCCTGGTCGGCCCCTCGGCTGGATaGCATGGTTGCACCCGAGAA +
Preference number: 2 (lower is better)
Translates to: EDVVREVPGAKDQLLGLVGPSAG*HGCTRE
Trigger: TTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCC...GACCAGGCCAAGCAGCTGGTCCTTAGCACCGGGTACCTCTCTGACAACATCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
3UTR-3UTR CCA 90 bp CCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTAGCTGCCCGAGGACATaGAAGGTCTGGTTGCTCTCA +
Preference number: 2 (lower is better)
Translates to: PGTRLWSALLVHPTQLRGSCPRT*KVWLLS
Trigger: TGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCT...ACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR-3UTR CCA 90 bp TGTAAAAGGCCAGAGGCCCGAGCTTCGCTGTCTCCACGGCGCAGTGGAAAACGCAGCACATCCAGGGGCTaGCACAGGAACGTGGCACAT +
Preference number: 2 (lower is better)
Translates to: CKRPEARASLSPRRSGKRSTSRG*HRNVAH
Trigger: ATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCT...GCGTTTTCCACTGCGCCGTGGAGACAGCGAAGCTCGGGCCTCTGGCCTTTTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR TCA 90 bp GAAGATGTTGTCAGAGAGGTACCCGGTGCTAAGGACCAGCTGCTTGGCCTGGTCGCCGGGGACACAGAATaGCCACATGAGACTCCCCCT +
Preference number: 2 (lower is better)
Translates to: EDVVREVPGAKDQLLGLVAGDTE*PHETPP
Trigger: AGGGGGAGTCTCATGTGGTCATTCTGTGTCCCCGGC...GACCAGGCCAAGCAGCTGGTCCTTAGCACCGGGTACCTCTCTGACAACATCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574884.5
3UTR-3UTR GCA 90 bp GCAGTGGAAAACGCCCTGATACTCCCCCTTGGAGTTCATCAGGCGAGTCTTCAGCAGGCCGCTGTAGAGTaGCAGGATGCCGTCGGTACG +
Preference number: 2 (lower is better)
Translates to: AVENALILPLGVHQASLQQAAVE*QDAVGT
Trigger: CGTACCGACGGCATCCTGGCACTCTACAGCGGCCTG...CTGAAGACTCGCCTGATGAACTCCAAGGGGGAGTATCAGGGCGTTTTCCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR CCA 90 bp CTGATACTCCCCCTTGGAGTTCATCAGGCGAGTCTTCAGCACATCCAGGGGCTGGTCTGCAGATGCACCTaGCCTTCACGCAGCGACCAG +
Preference number: 2 (lower is better)
Translates to: LILPLGVHQASLQHIQGLVCRCT*PSRSDQ
Trigger: CTGGTCGCTGCGTGAAGGCCAGGTGCATCTGCAGAC...CAGCCCCTGGATGTGCTGAAGACTCGCCTGATGAACTCCAAGGGGGAGTATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR CCA 90 bp GAGCACGGTGTGGGGGATGAGGCGGATGCCAGCTGGGACGAGGCCCTTGTAAAACCTGATACTCCCCCTTaGAGTTCATCAGGCGAGTCT +
Preference number: 2 (lower is better)
Translates to: EHGVGDEADASWDEALVKPDTPP*SSSGES
Trigger: AGACTCGCCTGATGAACTCCAAGGGGGAGTATCAGG...TTTTACAAGGGCCTCGTCCCAGCTGGCATCCGCCTCATCCCCCACACCGTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR GCA 90 bp CATCCAGCGCATGGGCGTAGTTGCGCCGCTGACCCTGGGGCAGCTTCACGTCGTAGCGACCAGCATTGTTaGTCATTAGTAAAGCCAGTC +
Preference number: 2 (lower is better)
Translates to: HPAHGRSCAADPGAASRRSDQHC*SLVKPV
Trigger: GACTGGCTTTACTAATGAGCAACAATGCTGGTCGCT...ACGACGTGAAGCTGCCCCAGGGTCAGCGGCGCAACTACGCCCATGCGCTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR CCA 90 bp CCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAAGCAGGTGCTGGGCTTaGGACTCTTTGGAAGAACCT +
Preference number: 2 (lower is better)
Translates to: PLPPRHSLVVCVACSSHPSRCWA*DSLEEP
Trigger: AGGTTCTTCCAAAGAGTCCCAAGCCCAGCACCTGCT...TGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR CCA 90 bp CCTTGGAGTTCATCAGGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGAACGCCCCTCAAAGGCTGCTaGAATACAAGTCCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: PWSSSGESSAHPGAGTGTPLKGC*NTSPLD
Trigger: GTCCAGGGGACTTGTATTCCAGCAGCCTTTGAGGGG...CGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGATGAACTCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR TCA 90 bp GAAGATGTTGTCAGAGAGGTACCCGGTGCTAAGGACCAGCTGCTTGGCCTGGTCCCGAGAACAGTCTCCTaGGACCCTCTTCACGAGCTA +
Preference number: 2 (lower is better)
Translates to: EDVVREVPGAKDQLLGLVPRTVS*DPLHEL
Trigger: TAGCTCGTGAAGAGGGTCTCAGGAGACTGTTCTCGG...GACCAGGCCAAGCAGCTGGTCCTTAGCACCGGGTACCTCTCTGACAACATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
3UTR-3UTR GCA 90 bp GAAGATGTTGTCAGAGAGGTACCCGGTGCTAAGGACCAGCTGCTTGGCCTGGTCGCTGGATGCCATGGTTaGACCCGAGAACAGTCTCCT +
Preference number: 2 (lower is better)
Translates to: EDVVREVPGAKDQLLGLVAGCHG*TREQSP
Trigger: AGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGC...GACCAGGCCAAGCAGCTGGTCCTTAGCACCGGGTACCTCTCTGACAACATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
3UTR-3UTR GCA 90 bp ACTAAGGCCCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAGTCTCCTGAGAAGTCCCCTCAAAGGCTaGTGGAATACAAGTCCCCTG +
Preference number: 2 (lower is better)
Translates to: TKAPRLDAMVAPENSLLRSPLKG*WNTSPL
Trigger: CAGGGGACTTGTATTCCAGCAGCCTTTGAGGGGACT...TCTCAGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR CAA 90 bp ACAATCCCTGAAGACAGAGACCGCCTGCTGGTGAGTGGAGAGGCTTaGGCAAAACTAACTGTTAAAGCCACTGCAGGGCAGGCAGCGGTG +
Preference number: 2 (lower is better)
Translates to: TIPEDRDRLLVSGEA*AKLTVKATAGQAAV
Trigger: CACCGCTGCCTGCCCTGCAGTGGCTTTAACAGTTAGTTTTGCCAAAGCCTCTCCACTCACCAGCAGGCGGTCTCTGTCTTCAGGGATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR CAA 90 bp CTGCTGCGTCTGCAGATGCACCTGGCCTTCACGCAGCGACCAGCATaGTTGCTCATTAGTAAAGCCAGTCCCCTCAAAGGCTGCTGGAAT +
Preference number: 2 (lower is better)
Translates to: LLRLQMHLAFTQRPA*LLISKASPLKGCWN
Trigger: ATTCCAGCAGCCTTTGAGGGGACTGGCTTTACTAATGAGCAACAATGCTGGTCGCTGCGTGAAGGCCAGGTGCATCTGCAGACGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR GCA 90 bp ACTAAGGCCCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAGTCTCCTGAGACGTGGCACATCCACCTaGAATAAAGCTGGCGACAAA +
Preference number: 2 (lower is better)
Translates to: TKAPRLDAMVAPENSLLRRGTST*NKAGDK
Trigger: TTTGTCGCCAGCTTTATTGCAGGTGGATGTGCCACG...TCTCAGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
3UTR-3UTR GCA 90 bp ACTAAGGCCCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAGTCTCCTGAGAAGCTTCACGTCGTTCTaGATCCTGACGTTGACCAAG +
Preference number: 2 (lower is better)
Translates to: TKAPRLDAMVAPENSLLRSFTSF*ILTLTK
Trigger: CTTGGTCAACGTCAGGATGCAGAACGACGTGAAGCT...TCTCAGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR CCA 90 bp CTCCCGGCATTTATTGATTGCAGCCCCCACAGAGCACACTGCCCTTCCCAGGTGCTCGATGGAAAGTGCTaGAAGATGCTGCTTTGGGCA +
Preference number: 2 (lower is better)
Translates to: LPAFIDCSPHRAHCPSQVLDGKC*KMLLWA
Trigger: TGCCCAAAGCAGCATCTTCCAGCACTTTCCATCGAG...CACCTGGGAAGGGCAGTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR CAA 90 bp CTGCGTCTGCAGATGCACCTGGCCTTCACGCAGCGACCAGCATTGTaGCTCATTAGTAAAGCCAGTCCCCTCAAAGGCTGCTGGAATACA +
Preference number: 2 (lower is better)
Translates to: LRLQMHLAFTQRPAL*LISKASPLKGCWNT
Trigger: TGTATTCCAGCAGCCTTTGAGGGGACTGGCTTTACTAATGAGCAACAATGCTGGTCGCTGCGTGAAGGCCAGGTGCATCTGCAGACGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR TCA 90 bp CCTTGGAGTTCATCAGGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGAACGTGGCGACAAAGTGAGTaGAGATGTTGTCAGAGAGGT +
Preference number: 2 (lower is better)
Translates to: PWSSSGESSAHPGAGTGTWRQSE*RCCQRG
Trigger: ACCTCTCTGACAACATCTTCACTCACTTTGTCGCCA...CGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGATGAACTCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
3UTR-3UTR TCA 90 bp CCAGCCATTCCCACGGCTGGTCAGGATGGCACTTTGATGCCAAAGTTTTTGCGTTGGCGACAAAGTGAGTaGAGATGTTGTCAGAGAGGT +
Preference number: 2 (lower is better)
Translates to: PAIPTAGQDGTLMPKFLRWRQSE*RCCQRG
Trigger: ACCTCTCTGACAACATCTTCACTCACTTTGTCGCCA...ACGCAAAAACTTTGGCATCAAAGTGCCATCCTGACCAGCCGTGGGAATGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR GCA 90 bp CAGGAACGTGGCACATCCACCTGCAATAAAGCTGGCGACAAAGTGAGTGAAGATCGTGGCACATCCACCTaGAATAAAGCTGGCGACAAA +
Preference number: 2 (lower is better)
Translates to: QERGTSTCNKAGDKVSEDRGTST*NKAGDK
Trigger: TTTGTCGCCAGCTTTATTGCAGGTGGATGTGCCACG...ATCTTCACTCACTTTGTCGCCAGCTTTATTGCAGGTGGATGTGCCACGTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
3UTR GCA 72 bp ACAGCGAGGCGCTCAGGCCGCTGTAGAGTGCCAGGATaGCGTCGGTACGCACCACCCGCAGCGCCATGCCCG +
Preference number: 3 (lower is better)
Translates to: TARRSGRCRVPG*RRYAPPAAPCP
Trigger: CGGGCATGGCGCTGCGGGTGGTGCGTACCGACGGCATCCTGGCACTCTACAGCGGCCTGAGCGCCTCGCTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR CCA 72 bp CCACTGCAGGGCAGGCAGCGGTGCGCGGGACCTCGGTaGCCCTCGACCCTCACCCACAATGGCTCCAGAACC +
Preference number: 3 (lower is better)
Translates to: PLQGRQRCAGPR*PSTLTHNGSRT
Trigger: GGTTCTGGAGCCATTGTGGGTGAGGGTCGAGGGCCACCGAGGTCCCGCGCACCGCTGCCTGCCCTGCAGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR GCA 72 bp CTGTCTGCACAGCGAGGCGCTCAGGCCGCTGTAGAGTaGCAGGATGCCGTCGGTACGCACCACCCGCAGCGC +
Preference number: 3 (lower is better)
Translates to: LSAQRGAQAAVE*QDAVGTHHPQR
Trigger: GCGCTGCGGGTGGTGCGTACCGACGGCATCCTGGCACTCTACAGCGGCCTGAGCGCCTCGCTGTGCAGACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR GCA 72 bp CCAGGATGCCGTCGGTACGCACCACCCGCAGCGCCATaGCCGTCATGCGCAGCTTCACCTCCTGCTGCGTCT +
Preference number: 3 (lower is better)
Translates to: PGCRRYAPPAAP*PSCAASPPAAS
Trigger: AGACGCAGCAGGAGGTGAAGCTGCGCATGACGGGCATGGCGCTGCGGGTGGTGCGTACCGACGGCATCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR CCA 72 bp CCCAGCAACACCTTCTCGTGGAAGGGGAGAGGCCCCTaGCTGCCCTTGGCCACACGGTCCCGCACAGTCTCG +
Preference number: 3 (lower is better)
Translates to: PSNTFSWKGRGP*LPLATRSRTVS
Trigger: CGAGACTGTGCGGGACCGTGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR GCA 72 bp CCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTaGCCGAGGACATGGAAGGTCTGGTTGCTCTCAGCA +
Preference number: 3 (lower is better)
Translates to: PTQLRGLAGSCS*PRTWKVWLLSA
Trigger: TGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR GCA 72 bp GCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTaGTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGG +
Preference number: 3 (lower is better)
Translates to: ATPSQALACGLR*LFIPPSCGVSR
Trigger: CCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR GCA 72 bp CGCAGCGCCATGCCCGTCATGCGCAGCTTCACCTCCTaGTGCGTCTGCAGATGCACCTGGCCTTCACGCAGC +
Preference number: 3 (lower is better)
Translates to: RSAMPVMRSFTS*CVCRCTWPSRS
Trigger: GCTGCGTGAAGGCCAGGTGCATCTGCAGACGCAGCAGGAGGTGAAGCTGCGCATGACGGGCATGGCGCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR CCA 72 bp CCTTCTCGTGGAAGGGGAGAGGCCCCTGGCTGCCCTTaGCCACACGGTCCCGCACAGTCTCGTAGATGGCGA +
Preference number: 3 (lower is better)
Translates to: PSRGRGEAPGCP*PHGPAQSRRWR
Trigger: TCGCCATCTACGAGACTGTGCGGGACCGTGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTTCCACGAGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR CAA 90 bp CAGCCGGGAGAGCCTGGTAGCCAGAGCGGGGGTGGTGCAGCTACAGCTGAGAGGGGCTGGATGCCATGGTaGCACCCGAGAACAGTCTCC +
Preference number: 3 (lower is better)
Translates to: QPGEPGSQSGGGAATAERGWMPW*HPRTVS
Trigger: GGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCC...CCTCTCAGCTGTAGCTGCACCACCCCCGCTCTGGCTACCAGGCTCTCCCGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR GCA 72 bp GTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTaGAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTC +
Preference number: 3 (lower is better)
Translates to: VHPTQLRGLAGS*SCPRTWKVWLL
Trigger: GAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR GCA 72 bp GCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTaGGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGA +
Preference number: 3 (lower is better)
Translates to: ACGLRCLFIPPS*GVSRGVAAARG
Trigger: TCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR GCA 72 bp AGCGCCATGCCCGTCATGCGCAGCTTCACCTCCTGCTaGGTCTGCAGATGCACCTGGCCTTCACGCAGCGAC +
Preference number: 3 (lower is better)
Translates to: SAMPVMRSFTSC*VCRCTWPSRSD
Trigger: GTCGCTGCGTGAAGGCCAGGTGCATCTGCAGACGCAGCAGGAGGTGAAGCTGCGCATGACGGGCATGGCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR CCA 72 bp GCTAAACCGCTGACGGAGCCCAGCAACACCTTCTCGTaGAAGGGGAGAGGCCCCTGGCTGCCCTTGGCCACA +
Preference number: 3 (lower is better)
Translates to: AKPLTEPSNTFS*KGRGPWLPLAT
Trigger: TGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCTGGGCTCCGTCAGCGGTTTAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR CAA 90 bp GGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGCCCAGCCATTCCCACGGGTCTCGCGGGGAGTaGCAGCTGCCCGAGGACATG +
Preference number: 3 (lower is better)
Translates to: GTLWKNLACLAWQPSHSHGSRGE*QLPEDM
Trigger: CATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCC...GTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR CCA 72 bp CGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATaGAAGGTCTGGTTGCTCTCAGCAGACACGAAGTGC +
Preference number: 3 (lower is better)
Translates to: RGLAGSCSCPRT*KVWLLSADTKC
Trigger: GCACTTCGTGTCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR-3UTR CAA 90 bp CGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGCAGACTGGAAGATGCTGCTTaGGGCATCGGGGGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: RGELQLPEDMEGLVALSRLEDAA*GIGGRR
Trigger: CCTCCTGCCCCCGATGCCCAAAGCAGCATCTTCCAG...TCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR CAA 90 bp CCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAACATGGAAGGTCTGGTaGCTCTCAGCAGACACGAAG +
Preference number: 3 (lower is better)
Translates to: PGRQRMQHPPRRTPCRGETWKVW*LSADTK
Trigger: CTTCGTGTCTGCTGAGAGCAACCAGACCTTCCATGT...TTCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR CCA 72 bp GCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTaGTTGCTCTCAGCAGACACGAAGTGCAGAGCTAGC +
Preference number: 3 (lower is better)
Translates to: AGSCSCPRTWKV*LLSADTKCRAS
Trigger: GCTAGCTCTGCACTTCGTGTCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR CCA 72 bp TGCCCTTGGCCACACGGTCCCGCACAGTCTCGTAGATaGCGAACCGAGTCAGGGAGTAGGTCATCTGTCTGC +
Preference number: 3 (lower is better)
Translates to: CPWPHGPAQSRR*RTESGSRSSVC
Trigger: GCAGACAGATGACCTACTCCCTGACTCGGTTCGCCATCTACGAGACTGTGCGGGACCGTGTGGCCAAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR CCA 72 bp CTTGGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTaGCAGCCCAGCCATTCCCACGGCTGGTCAGGATGG +
Preference number: 3 (lower is better)
Translates to: LGTLWKNLACLA*QPSHSHGWSGW
Trigger: CCATCCTGACCAGCCGTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR CAA 90 bp CCAGCAACACCTTCTCGTGGAAGGGGAGAGGCCCCTGGCTGCCCTTGGCCACACACGCAGCGACCAGCATaGTTGCTCATTAGTAAAGCC +
Preference number: 3 (lower is better)
Translates to: PATPSRGRGEAPGCPWPHTQRPA*LLISKA
Trigger: GGCTTTACTAATGAGCAACAATGCTGGTCGCTGCGT...GTGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR GCA 72 bp CACCCACACTCTGCCACCCAAGTCCTCGATGGAAAGTaGTGGAAGATGCTGCTTTGGGCATCGGGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: HPHSATQVLDGK*WKMLLWASGAG
Trigger: TCCTGCCCCCGATGCCCAAAGCAGCATCTTCCAGCACTTTCCATCGAGGACTTGGGTGGCAGAGTGTGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR CAA 90 bp AGCAACAGCCAGGCTGCACCCACACTCTGCCACCCAAGTCCTCGATGGAAAGTGGAGCAGGTGCTGGGCTaGGGACTCTTTGGAAGAACC +
Preference number: 3 (lower is better)
Translates to: SNSQAAPTLCHPSPRWKVEQVLG*GLFGRT
Trigger: GGTTCTTCCAAAGAGTCCCAAGCCCAGCACCTGCTC...CACTTTCCATCGAGGACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCTGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR-3UTR CAA 90 bp CCCGCACAGTCTCGTAGATGGCGAACCGAGTCAGGGAGTAGGTCATCTGTCTGCGAGCAGGTGCTGGGCTaGGGACTCTTTGGAAGAACC +
Preference number: 3 (lower is better)
Translates to: PAQSRRWRTESGSRSSVCEQVLG*GLFGRT
Trigger: GGTTCTTCCAAAGAGTCCCAAGCCCAGCACCTGCTC...GCAGACAGATGACCTACTCCCTGACTCGGTTCGCCATCTACGAGACTGTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR CAA 90 bp CTCCCGGCATTTATTGATTGCAGCCCCCACAGAGCACACTGCCCTTCCCAGGTGCGCTTGTGGTCTGCGTaGCTTGTTCATCCCACCCAG +
Preference number: 3 (lower is better)
Translates to: LPAFIDCSPHRAHCPSQVRLWSA*LVHPTQ
Trigger: CTGGGTGGGATGAACAAGCAACGCAGACCACAAGCG...CACCTGGGAAGGGCAGTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR-3UTR CAA 90 bp CTCCCGGCATTTATTGATTGCAGCCCCCACAGAGCACACTGCCCTTCCCAGGTGCTCCCAGGCACTCGCTaGTGGTCTGCGTTGCTTGTT +
Preference number: 3 (lower is better)
Translates to: LPAFIDCSPHRAHCPSQVLPGTR*WSALLV
Trigger: AACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAG...CACCTGGGAAGGGCAGTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR-3UTR CAA 90 bp CGAGGCCCTTGTAAAAGGCCAGAGGCCCGAGCTTCGCTGTCTCCACGGCGCAGTCAGCGACCAGCATTGTaGCTCATTAGTAAAGCCAGT +
Preference number: 3 (lower is better)
Translates to: RGPCKRPEARASLSPRRSQRPAL*LISKAS
Trigger: ACTGGCTTTACTAATGAGCAACAATGCTGGTCGCTG...ACTGCGCCGTGGAGACAGCGAAGCTCGGGCCTCTGGCCTTTTACAAGGGCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR GCA 72 bp ACTTGGGTGAGCAACAGCCAGGCTGCACCCACACTCTaGCACCCAAGTCCTCGATGGAAAGTGCTGGAAGAT +
Preference number: 3 (lower is better)
Translates to: TWVSNSQAAPTL*HPSPRWKVLED
Trigger: ATCTTCCAGCACTTTCCATCGAGGACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCTGTTGCTCACCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
3UTR CCA 72 bp GAGTTCATCAGGCGAGTCTTCAGCACATCCAGGGGCTaGCACAGGAACGTGGCACATCCACCTGCAATAAAG +
Preference number: 3 (lower is better)
Translates to: EFIRRVFSTSRG*HRNVAHPPAIK
Trigger: CTTTATTGCAGGTGGATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGATGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
3UTR-3UTR CAA 90 bp CGCCTGCTGGTGAGTGGAGAGGCTTTGGCAAAACTAACTGTTAAAGCCACTGCACGCTTGTGGTCTGCGTaGCTTGTTCATCCCACCCAG +
Preference number: 3 (lower is better)
Translates to: RLLVSGEALAKLTVKATARLWSA*LVHPTQ
Trigger: CTGGGTGGGATGAACAAGCAACGCAGACCACAAGCG...TGCAGTGGCTTTAACAGTTAGTTTTGCCAAAGCCTCTCCACTCACCAGCAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR GCA 72 bp AGATGCACCTGGCCTTCACGCAGCGACCAGCATTGTTaGTCATTAGTAAAGCCAGTCCCCTCAAAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: RCTWPSRSDQHC*SLVKPVPSKAA
Trigger: AGCAGCCTTTGAGGGGACTGGCTTTACTAATGAGCAACAATGCTGGTCGCTGCGTGAAGGCCAGGTGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR TCA 72 bp GCCCAGCCATTCCCACGGCTGGTCAGGATGGCACTTTaGTGCCAAAGTTTTTGCGTAGCTGTTCCAGAAACA +
Preference number: 3 (lower is better)
Translates to: AQPFPRLVRMAL*CQSFCVAVPET
Trigger: TGTTTCTGGAACAGCTACGCAAAAACTTTGGCATCAAAGTGCCATCCTGACCAGCCGTGGGAATGGCTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR-3UTR CAA 90 bp CGGCATTTATTGATTGCAGCCCCCACAGAGCACACTGCCCTTCCCAGGTGGGGTGTGAGTGGAGAGGCTTaGGCAAAACTAACTGTTAAA +
Preference number: 3 (lower is better)
Translates to: RHLLIAAPTEHTALPRWGVSGEA*AKLTVK
Trigger: TTTAACAGTTAGTTTTGCCAAAGCCTCTCCACTCAC...ACCCCACCTGGGAAGGGCAGTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGGGGACAGCAGGGGCCTaGTGCGGAGGACGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RRTPCRGEGPKEEPRPAWGTAGA*CGGRVA
Trigger: GGCCACCCGTCCTCCGCAGCAGGCCCCTGCTGTCCC...CCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCACGCGCGCCTCGGCTaGCATGGCCCAGGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: HPPRRTPCRGEGPKEEPRHARLG*HGPGEP
Trigger: GGGCTCTCCTGGGCCATGGCAGCCGAGGCGCGCGTG...CCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp TCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAACACGCGCGCCTCGGCTaGCATGGCCCAGGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: SHPAAGSRGELQLPEDMEHARLG*HGPGEP
Trigger: GGGCTCTCCTGGGCCATGGCAGCCGAGGCGCGCGTG...TTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp ATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCGAACCGCGGCCCGCCTaGGCCATTCCCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: IRPVGLLVGEKALRRNRGEPRPA*AIPPGS
Trigger: GCTCCCTGGGGGAATGGCCCAGGCGGGCCGCGGTTC...GCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACGGGGCGGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGGCGCATGGGCGTAGTTaGGCCGCTGACCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RRTPCRGEGPKEEPRPAWAHGRS*AADPGA
Trigger: TGCCCCAGGGTCAGCGGCGCAACTACGCCCATGCGC...CCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GGCGCTCAGGCCGCTGTAGAGTGCCAGGATGCCGTCGGTACGCACCACCCGCAGGCGCATGGGCGTAGTTaGGCCGCTGACCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GAQAAVECQDAVGTHHPQAHGRS*AADPGA
Trigger: TGCCCCAGGGTCAGCGGCGCAACTACGCCCATGCGC...CTGCGGGTGGTGCGTACCGACGGCATCCTGGCACTCTACAGCGGCCTGAGCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CCA 90 bp CTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGGCCATTCGCCCCTGGCTGCCCTTaGCCACACGGTCCCGCACAG +
Preference number: 4 (lower is better)
Translates to: LLVGEKALRRNRGPPGPFAPGCP*PHGPAQ
Trigger: CTGTGCGGGACCGTGTGGCCAAGGGCAGCCAGGGGC...GAATGGCCCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGAAGGGGAGAGGCCCCTaGCTGCCCTTGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: RRTPCRGEGPKEEPRPAWKGRGP*LPLATR
Trigger: CCGTGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTT...CCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp CAGCCGGGAGAGCCTGGTAGCCAGAGCGGGGGTGGTGCAGCTACAGCTGAGAGGGCACGGTGTGGGGGATaGGGCGGATGCCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QPGEPGSQSGGGAATAERARCGG*GGCQLG
Trigger: TCCCAGCTGGCATCCGCCTCATCCCCCACACCGTGC...CCTCTCAGCTGTAGCTGCACCACCCCCGCTCTGGCTACCAGGCTCTCCCGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000574129.5
CDS-3UTR GCA 90 bp GGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCCACGCGCGCCTCGGCTaGCATGGCCCAGGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: GSRGELQLPEDMEGLVALHARLG*HGPGEP
Trigger: GGGCTCTCCTGGGCCATGGCAGCCGAGGCGCGCGTG...GAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCACAGCAGGGGCCTGCTaGGGAGGACGGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: ALLVHPTQLRGLAGSCSCTAGAC*GGRVAT
Trigger: CGTGGCCACCCGTCCTCCGCAGCAGGCCCCTGCTGT...GCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGGGACAGCAGGGGCCTaGTGCGGAGGACGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LRCLFIPPSCGVSRGVAAGTAGA*CGGRVA
Trigger: GGCCACCCGTCCTCCGCAGCAGGCCCCTGCTGTCCC...AGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp AGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGGGCAAGGCCACGCAGTaGCCAGCCGGGAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: REAEDAASAPSDSLSGRRGKATQ*PAGRAW
Trigger: CCAGGCTCTCCCGGCTGGGCACTGCGTGGCCTTGCC...CCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCAAGGCCACGCAGTaGCCAGCCGGGAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGRQRMQHPPRRTPCRGEGKATQ*PAGRAW
Trigger: CCAGGCTCTCCCGGCTGGGCACTGCGTGGCCTTGCC...TTCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGGGTCTCGCGGGGAGTTaGAGCTGCCCGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: RRTPCRGEGPKEEPRPAWGLAGS*SCPRTW
Trigger: CCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACC...CCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp ATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAGCGCCTCGGCTGCCATaGCCCAGGAGAGCCCAATCC +
Preference number: 4 (lower is better)
Translates to: IPPSCGVSRGVAAARGHGAPRLP*PRRAQS
Trigger: GGATTGGGCTCTCCTGGGCCATGGCAGCCGAGGCGC...TCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp ATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCAAGGGGAGAGGCCCCTaGCTGCCCTTGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: IRPVGLLVGEKALRRNRGKGRGP*LPLATR
Trigger: CCGTGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTT...GCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACGGGGCGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp CTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGGCCATTCGTGGCACATCCACCCTaGGGAGGGGGCTCGTCACCA +
Preference number: 4 (lower is better)
Translates to: LLVGEKALRRNRGPPGPFVAHPP*GGGSSP
Trigger: TGGTGACGAGCCCCCTCCTCAGGGTGGATGTGCCAC...GAATGGCCCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331531.9
CDS-3UTR TCA 90 bp ACAGCGAGGCGCTCAGGCCGCTGTAGAGTGCCAGGATGCCGTCGGTACGCACCAGCACGGTGTGGGGGATaGGGCGGATGCCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TARRSGRCRVPGCRRYAPARCGG*GGCQLG
Trigger: TCCCAGCTGGCATCCGCCTCATCCCCCACACCGTGC...TGGTGCGTACCGACGGCATCCTGGCACTCTACAGCGGCCTGAGCGCCTCGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR GCA 90 bp CCCGAGCTTCGCTGTCTCCACGGCGCAGTGGAAAACGCCCTGATACTCCCCCTTCACGCGCGCCTCGGCTaGCATGGCCCAGGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: PELRCLHGAVENALILPLHARLG*HGPGEP
Trigger: GGGCTCTCCTGGGCCATGGCAGCCGAGGCGCGCGTG...AAGGGGGAGTATCAGGGCGTTTTCCACTGCGCCGTGGAGACAGCGAAGCTCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR GCA 90 bp CATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCACCCGCAGCGCCATaGCCGTCATGCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: HPPRRTPCRGEGPKEEPRPPAAP*PSCAAS
Trigger: TGAAGCTGCGCATGACGGGCATGGCGCTGCGGGTGG...CCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CAGCCGGGAGAGCCTGGTAGCCAGAGCGGGGGTGGTGCAGCTACAGCTGAGAGGCCACCCGCAGCGCCATaGCCGTCATGCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QPGEPGSQSGGGAATAERPPAAP*PSCAAS
Trigger: TGAAGCTGCGCATGACGGGCATGGCGCTGCGGGTGG...CCTCTCAGCTGTAGCTGCACCACCCCCGCTCTGGCTACCAGGCTCTCCCGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000574129.5
CDS-3UTR GCA 90 bp CGAGGCCCTTGTAAAAGGCCAGAGGCCCGAGCTTCGCTGTCTCCACGGCGCAGTACAGCAGGGGCCTGCTaGGGAGGACGGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: RGPCKRPEARASLSPRRSTAGAC*GGRVAT
Trigger: CGTGGCCACCCGTCCTCCGCAGCAGGCCCCTGCTGT...ACTGCGCCGTGGAGACAGCGAAGCTCGGGCCTCTGGCCTTTTACAAGGGCCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR GCA 90 bp GGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGAACGTGGCACATCCACCTGGGGACAGCAGGGGCCTaGTGCGGAGGACGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GESSAHPGAGTGTWHIHLGTAGA*CGGRVA
Trigger: GGCCACCCGTCCTCCGCAGCAGGCCCCTGCTGTCCC...CAGGTGGATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR GCA 90 bp AGCCCAGCGACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGGGTCTCGCGGGGAGTTaGAGCTGCCCGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: SPATREAEDAASAPSDSLGLAGS*SCPRTW
Trigger: CCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACC...CAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGTCGCTGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp GCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCGCGCCTCGGCTGCCATaGCCCAGGAGAGCCCAATCC +
Preference number: 4 (lower is better)
Translates to: ALLVHPTQLRGLAGSCSCAPRLP*PRRAQS
Trigger: GGATTGGGCTCTCCTGGGCCATGGCAGCCGAGGCGC...GCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTGCTGCGGAGGACGGGTaGCCACGGCCAGGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: PGTRLWSALLVHPTQLRGAAEDG*PRPGRS
Trigger: CGACCTCCCTGGCCGTGGCCACCCGTCCTCCGCAGC...ACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp GGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCATGCGCGGGACCTCGGTaGCCCTCGACCCTCACCCAC +
Preference number: 4 (lower is better)
Translates to: GLRCLFIPPSCGVSRGVACAGPR*PSTLTH
Trigger: GTGGGTGAGGGTCGAGGGCCACCGAGGTCCCGCGCA...TGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp CTTCACGAGCTACGCGGTACAGGCCATCCAGCGCATGGGCGTAGCTGCCGGGGAACAGCTGGCCCACAGTaGCTAAGGCCCCTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LHELRGTGHPAHGRSCRGTAGPQ*LRPLGW
Trigger: CCAGCCGAGGGGCCTTAGTCACTGTGGGCCAGCTGT...TCCCCGGCAGCTACGCCCATGCGCTGGATGGCCTGTACCGCGTAGCTCGTGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574884.5
CDS-3UTR TCA 90 bp ATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGATGGTGCAGCTACAGCTaGGAGGGGACGAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: IPPSCGVSRGVAAARGHGWCSYS*EGTRPG
Trigger: TCCTGGCCTCGTCCCCTCTCAGCTGTAGCTGCACCA...TCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp GGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCCTTCCCAGGTGGGGTaGAGCCCAGCGACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GVSRGVAAARGHGRSGCSPSQVG*SPATRE
Trigger: CTCCCTGGTCGCTGGGCTTCACCCCACCTGGGAAGG...AGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp TCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCCCTTCCCAGGTGGGGTaGAGCCCAGCGACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SALLVHPTQLRGLAGSCSPSQVG*SPATRE
Trigger: CTCCCTGGTCGCTGGGCTTCACCCCACCTGGGAAGG...GCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAAGCAGGTCCAGCGGGTaGGTGCAGCAGGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: PLPPRHSLVVCVACSSHPSRSSG*VQQAAP
Trigger: CGGGGCCGCCTGCTGCACGCACCCGCTGGACCTGCT...TGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp ATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAGCGCCATGCCCGTCATaGGCAGCTTCACCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: IPPSCGVSRGVAAARGHGAPCPS*AASPPA
Trigger: AGCAGGAGGTGAAGCTGCGCATGACGGGCATGGCGC...TCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp ATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGACAGGCCGCTGTAGAGTaGCAGGATGCCGTCGGTACG +
Preference number: 4 (lower is better)
Translates to: IPPSCGVSRGVAAARGHGQAAVE*QDAVGT
Trigger: CGTACCGACGGCATCCTGGCACTCTACAGCGGCCTG...TCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGGACGTTGACCAAGTCTaGGGGCGTCCCCACGAAGCC +
Preference number: 4 (lower is better)
Translates to: HPPRRTPCRGEGPKEEPRDVDQV*GRPHEA
Trigger: GGCTTCGTGGGGACGCCCGCAGACTTGGTCAACGTC...CCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCACAGCAGGGGCCTGCTaGGGAGGACGGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: PWATPSQALACGLRCLFITAGAC*GGRVAT
Trigger: CGTGGCCACCCGTCCTCCGCAGCAGGCCCCTGCTGT...GATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGCCCAGCCATTCCCACGGGACAGCAGGGGCCTaGTGCGGAGGACGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GTLWKNLACLAWQPSHSHGTAGA*CGGRVA
Trigger: GGCCACCCGTCCTCCGCAGCAGGCCCCTGCTGTCCC...GTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000574129.5
CDS-3UTR GCA 90 bp ACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGCAAGGCCACGCAGTaGCCAGCCGGGAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TRLWSALLVHPTQLRGLAGKATQ*PAGRAW
Trigger: CCAGGCTCTCCCGGCTGGGCACTGCGTGGCCTTGCC...CGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp AGCCCAGCGACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGGCGGGGAGTTGCAGCTaGCCGAGGACATGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SPATREAEDAASAPSDSLAGSCS*PRTWKV
Trigger: GACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGC...CAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGTCGCTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp TCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGCGGGGAGTTGCAGCTaGCCGAGGACATGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SHPAAGSRGELQLPEDMEAGSCS*PRTWKV
Trigger: GACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGC...TTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCTAGCGTGTCTGGCCTaGCAGCCCAGCCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: HPPRRTPCRGEGPKEEPRLACLA*QPSHSH
Trigger: GTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAG...CCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGAGGACGGGTaGCCACGGCCAGGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: PLPPRHSLVVCVACSSHPAAEDG*PRPGRS
Trigger: CGACCTCCCTGGCCGTGGCCACCCGTCCTCCGCAGC...TGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp TCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGCCCAGCCATTCCCACGGCTGGCTGCGGAGGACGGGTaGCCACGGCCAGGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: SLEEPSVSGLAAQPFPRLAAEDG*PRPGRS
Trigger: CGACCTCCCTGGCCGTGGCCACCCGTCCTCCGCAGC...CAGCCGTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000574129.5
CDS-3UTR CCA 90 bp ACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGTGCGCGGGACCTCGGTaGCCCTCGACCCTCACCCAC +
Preference number: 4 (lower is better)
Translates to: TRLWSALLVHPTQLRGLACAGPR*PSTLTH
Trigger: GTGGGTGAGGGTCGAGGGCCACCGAGGTCCCGCGCA...CGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR CAA 72 bp GGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTaGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCG +
Preference number: 4 (lower is better)
Translates to: GHSLPGTRLWSA*LVHPTQLRGLA
Trigger: CGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp AGCCCAGCGACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGCTCCAGCTAAACCGCTaGCGGAGCCCAGCAACACCT +
Preference number: 4 (lower is better)
Translates to: SPATREAEDAASAPSDSLLQLNR*RSPATP
Trigger: AGGTGTTGCTGGGCTCCGTCAGCGGTTTAGCTGGAG...CAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGTCGCTGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp GCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGCTCCAGCTAAACCGCTaGCGGAGCCCAGCAACACCT +
Preference number: 4 (lower is better)
Translates to: ACSSHPAAGSRGELQLPELQLNR*RSPATP
Trigger: AGGTGTTGCTGGGCTCCGTCAGCGGTTTAGCTGGAG...CTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp CCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCGCACGGTGTGGGGGATaGGGCGGATGCCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PWATPSQALACGLRCLFIARCGG*GGCQLG
Trigger: TCCCAGCTGGCATCCGCCTCATCCCCCACACCGTGC...GATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp ACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGCACGGTGTGGGGGATaGGGCGGATGCCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TRLWSALLVHPTQLRGLAARCGG*GGCQLG
Trigger: TCCCAGCTGGCATCCGCCTCATCCCCCACACCGTGC...CGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp CGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCTGGTGCAGCTACAGCTaGGAGGGGACGAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RCLFIPPSCGVSRGVAAAWCSYS*EGTRPG
Trigger: TCCTGGCCTCGTCCCCTCTCAGCTGTAGCTGCACCA...GGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp AGCAACACCTTCTCGTGGAAGGGGAGAGGCCCCTGGCTGCCCTTGGCCACACGGTGGTGCAGCTACAGCTaGGAGGGGACGAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SNTFSWKGRGPWLPLATRWCSYS*EGTRPG
Trigger: TCCTGGCCTCGTCCCCTCTCAGCTGTAGCTGCACCA...CCGTGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR TCA 90 bp CTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGGCCATTCGAGACCGCCTGCTGGTaGGTGGAGAGGCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LLVGEKALRRNRGPPGPFETACW*VERLWQ
Trigger: TTGCCAAAGCCTCTCCACTCACCAGCAGGCGGTCTC...GAATGGCCCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp ATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCTGTAGAGTGCCAGGATaGCGTCGGTACGCACCACCC +
Preference number: 4 (lower is better)
Translates to: IRPVGLLVGEKALRRNRGCRVPG*RRYAPP
Trigger: GGGTGGTGCGTACCGACGGCATCCTGGCACTCTACA...GCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACGGGGCGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp ACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGGCCATTCAGGCCGCTGTAGAGTaGCAGGATGCCGTCGGTACG +
Preference number: 4 (lower is better)
Translates to: TPCRGEGPKEEPRPAWAIQAAVE*QDAVGT
Trigger: CGTACCGACGGCATCCTGGCACTCTACAGCGGCCTG...AATGGCCCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCGGCCCCTCGGCTGGATaGCATGGTTGCACCCGAGAA +
Preference number: 4 (lower is better)
Translates to: ALLVHPTQLRGLAGSCSCGPSAG*HGCTRE
Trigger: TTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCC...GCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp ACCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATACAGCAGGGGCCTGCTaGGGAGGACGGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: TLGHSLPGTRLWSALLVHTAGAC*GGRVAT
Trigger: CGTGGCCACCCGTCCTCCGCAGCAGGCCCCTGCTGT...ATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCGTTCCCCTGAGGAGCTaGCAGCGGGAGAGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GSRGELQLPEDMEGLVALVPLRS*QRERGK
Trigger: CTTGCCCCTCTCCCGCTGGCAGCTCCTCAGGGGAAC...GAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGAGTGCTGGAAGATGCTaGTTTGGGCATCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PTQLRGLAGSCSCPRTWKSAGRC*FGHRGQ
Trigger: CTGCCCCCGATGCCCAAAGCAGCATCTTCCAGCACT...CTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CCAGCGACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGCTGCACCCACACTCTaGCACCCAAGTCCTCGATGG +
Preference number: 4 (lower is better)
Translates to: PATREAEDAASAPSDSLSAAPTL*HPSPRW
Trigger: CCATCGAGGACTTGGGTGGCAGAGTGTGGGTGCAGC...CGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGTCGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGAGCAACAGCCAGGCTaGACCCACACTCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: AAGSRGELQLPEDMEGLVEQQPG*THTLPP
Trigger: GGGTGGCAGAGTGTGGGTGCAGCCTGGCTGTTGCTC...AACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGGGTCTCGCGGGGAGTTaGAGCTGCCCGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: VCVACSSHPAAGSRGELQGLAGS*SCPRTW
Trigger: CCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACC...CTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp GCAGGTGCTGGGCTTGGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGGCCCCTGGCTGCCCTTaGCCACACGGTCCCGCACAG +
Preference number: 4 (lower is better)
Translates to: AGAGLGTLWKNLACLAWQAPGCP*PHGPAQ
Trigger: CTGTGCGGGACCGTGTGGCCAAGGGCAGCCAGGGGC...CTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCCAAGCCCAGCACCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000574129.5
CDS-3UTR CCA 90 bp ACCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATGCCCCTGGCTGCCCTTaGCCACACGGTCCCGCACAG +
Preference number: 4 (lower is better)
Translates to: TLGHSLPGTRLWSALLVHAPGCP*PHGPAQ
Trigger: CTGTGCGGGACCGTGTGGCCAAGGGCAGCCAGGGGC...ATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCAAGGGGAGAGGCCCCTaGCTGCCCTTGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: PWATPSQALACGLRCLFIKGRGP*LPLATR
Trigger: CCGTGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTT...GATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp TGGCCCACAGTGACTAAGGCCCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAAGGGGAGAGGCCCCTaGCTGCCCTTGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: WPTVTKAPRLDAMVAPENKGRGP*LPLATR
Trigger: CCGTGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTT...GTTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAGTCACTGTGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR CCA 90 bp CCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAACTAAGGCCCCTCGGCTaGATGCCATGGTTGCACCCG +
Preference number: 4 (lower is better)
Translates to: PGRQRMQHPPRRTPCRGELRPLG*MPWLHP
Trigger: CGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAG...TTCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp AGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCCCTCTAAGGCCCCTCGGCTaGATGCCATGGTTGCACCCG +
Preference number: 4 (lower is better)
Translates to: RQRMQHPPRRTPCRGEGPLRPLG*MPWLHP
Trigger: CGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAG...AGGGCCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp GGCGCTCAGGCCGCTGTAGAGTGCCAGGATGCCGTCGGTACGCACCACCCGCAGGAGGCGGATGCCAGCTaGGACGAGGCCCTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: GAQAAVECQDAVGTHHPQEADAS*DEALVK
Trigger: TTTTACAAGGGCCTCGTCCCAGCTGGCATCCGCCTC...CTGCGGGTGGTGCGTACCGACGGCATCCTGGCACTCTACAGCGGCCTGAGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CCA 90 bp ATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGATGGAAGATGCTGCTTTaGGCATCGGGGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: IPPSCGVSRGVAAARGHGWKMLL*ASGAGG
Trigger: GCCTCCTGCCCCCGATGCCCAAAGCAGCATCTTCCA...TCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CTCCCGGCATTTATTGATTGCAGCCCCCACAGAGCACACTGCCCTTCCCAGGTGGAACCGCGGCCCGCCTaGGCCATTCCCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LPAFIDCSPHRAHCPSQVEPRPA*AIPPGS
Trigger: GCTCCCTGGGGGAATGGCCCAGGCGGGCCGCGGTTC...CACCTGGGAAGGGCAGTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp AGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCCCTACTGCCCTTCCCAGGTaGGGTGAAGCCCAGCGACCA +
Preference number: 4 (lower is better)
Translates to: RQRMQHPPRRTPCRGEGPTALPR*GEAQRP
Trigger: TGGTCGCTGGGCTTCACCCCACCTGGGAAGGGCAGT...AGGGCCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp ACGCACCACCCGCAGCGCCATGCCCGTCATGCGCAGCTTCACCTCCTGCTGCGTGTCTGCAGATGCACCTaGCCTTCACGCAGCGACCAG +
Preference number: 4 (lower is better)
Translates to: THHPQRHARHAQLHLLLRVCRCT*PSRSDQ
Trigger: CTGGTCGCTGCGTGAAGGCCAGGTGCATCTGCAGAC...ACGCAGCAGGAGGTGAAGCTGCGCATGACGGGCATGGCGCTGCGGGTGGTGCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR CAA 72 bp ACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTaGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGA +
Preference number: 4 (lower is better)
Translates to: TPSQALACGLRC*FIPPSCGVSRG
Trigger: TCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp TCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTCTGCAGATGCACCTTaGGCAGGTCCAGCGGGTGCG +
Preference number: 4 (lower is better)
Translates to: SALLVHPTQLRGLAGSCSSADAP*AGPAGA
Trigger: CGCACCCGCTGGACCTGCTCAAGGTGCATCTGCAGA...GCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp GTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGACAGCTGGCCCACAGTaGCTAAGGCCCCTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: VSRGVAAARGHGRSGCSQTAGPQ*LRPLGW
Trigger: CCAGCCGAGGGGCCTTAGTCACTGTGGGCCAGCTGT...CTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR TCA 90 bp CCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGCAGTGGAAAACGCCCTaGTACTCCCCCTTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: PTQLRGLAGSCSCPRTWKQWKTP*YSPLEF
Trigger: GAACTCCAAGGGGGAGTATCAGGGCGTTTTCCACTG...CTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp TCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGCCCAGCCATTCCCACGGCTGCCTTCCCAGGTGGGGTaGAGCCCAGCGACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SLEEPSVSGLAAQPFPRLPSQVG*SPATRE
Trigger: CTCCCTGGTCGCTGGGCTTCACCCCACCTGGGAAGG...CAGCCGTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR TCA 90 bp CATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGGCTCCCGGCATTTATTaGTTGCAGCCCCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: HPPRRTPCRGEGPKEEPRAPGIY*LQPPQS
Trigger: GCTCTGTGGGGGCTGCAATCAATAAATGCCGGGAGC...CCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp GACCCTCTTCACGAGCTACGCGGTACAGGCCATCCAGCGCATGGGCGTAGCTGCGAGGCCTCATGGGCCTaGAGATCTCTCCTTGCGCCG +
Preference number: 4 (lower is better)
Translates to: DPLHELRGTGHPAHGRSCEASWA*RSLLAP
Trigger: CGGCGCAAGGAGAGATCTTCAGGCCCATGAGGCCTC...GCAGCTACGCCCATGCGCTGGATGGCCTGTACCGCGTAGCTCGTGAAGAGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574884.5
CDS-3UTR GCA 90 bp CATCCAGCGCATGGGCGTAGTTGCGCCGCTGACCCTGGGGCAGCTTCACGTCGTCGCAGCTTCACCTCCTaGTGCGTCTGCAGATGCACC +
Preference number: 4 (lower is better)
Translates to: HPAHGRSCAADPGAASRRRSFTS*CVCRCT
Trigger: GGTGCATCTGCAGACGCAGCAGGAGGTGAAGCTGCG...ACGACGTGAAGCTGCCCCAGGGTCAGCGGCGCAACTACGCCCATGCGCTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR GCA 90 bp TGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGGACGTTGACCAAGTCTaGGGGCGTCCCCACGAAGCC +
Preference number: 4 (lower is better)
Translates to: CVACSSHPAAGSRGELQLDVDQV*GRPHEA
Trigger: GGCTTCGTGGGGACGCCCGCAGACTTGGTCAACGTC...CAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGGCCAGCTGGATGCCATGGTTaGACCCGAGAACAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GLLVGEKALRRNRGPPGPAGCHG*TREQSP
Trigger: AGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGC...TGGCCCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp TGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGGGCCCCTCGGCTGGATaGCATGGTTGCACCCGAGAA +
Preference number: 4 (lower is better)
Translates to: CVACSSHPAAGSRGELQLGPSAG*HGCTRE
Trigger: TTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCC...CAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CCTTGGAGTTCATCAGGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGAACGGGCAAGGCCACGCAGTaGCCAGCCGGGAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PWSSSGESSAHPGAGTGTGKATQ*PAGRAW
Trigger: CCAGGCTCTCCCGGCTGGGCACTGCGTGGCCTTGCC...CGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGATGAACTCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR GCA 90 bp CGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGCAGAGTTCCCCTGAGGAGCTaGCAGCGGGAGAGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: RGELQLPEDMEGLVALSRVPLRS*QRERGK
Trigger: CTTGCCCCTCTCCCGCTGGCAGCTCCTCAGGGGAAC...TCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CAGCCGGGAGAGCCTGGTAGCCAGAGCGGGGGTGGTGCAGCTACAGCTGAGAGGAGTGCTGGAAGATGCTaGTTTGGGCATCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QPGEPGSQSGGGAATAERSAGRC*FGHRGQ
Trigger: CTGCCCCCGATGCCCAAAGCAGCATCTTCCAGCACT...CCTCTCAGCTGTAGCTGCACCACCCCCGCTCTGGCTACCAGGCTCTCCCGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR GCA 90 bp CGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGGAAAGTGCTGGAAGATaGTGCTTTGGGCATCGGGGG +
Preference number: 4 (lower is better)
Translates to: RRTPCRGEGPKEEPRPAWESAGR*CFGHRG
Trigger: CCCCCGATGCCCAAAGCAGCATCTTCCAGCACTTTC...CCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGAGCAACAGCCAGGCTaGACCCACACTCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: GLRCLFIPPSCGVSRGVAEQQPG*THTLPP
Trigger: GGGTGGCAGAGTGTGGGTGCAGCCTGGCTGTTGCTC...TGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTGAGCAACAGCCAGGCTaGACCCACACTCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: GVSRGVAAARGHGRSGCSEQQPG*THTLPP
Trigger: GGGTGGCAGAGTGTGGGTGCAGCCTGGCTGTTGCTC...AGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp TCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTTCATCCCACCCAGCTaGGGGGTCTCGCGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SALLVHPTQLRGLAGSCSFIPPS*GVSRGV
Trigger: AACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAA...GCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTTCATCCCACCCAGCTaGGGGGTCTCGCGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: PRHSLVVCVACSSHPAAGFIPPS*GVSRGV
Trigger: AACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAA...CCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGCGTGGCACATCCACCTaGAATAAAGCTGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: RRTPCRGEGPKEEPRPAWRGTST*NKAGPQ
Trigger: CTGTGGGCCAGCTTTATTGCAGGTGGATGTGCCACG...CCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545862.5
CDS-3UTR CCA 90 bp TCCCCCTTGGAGTTCATCAGGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGGCGCCTCGGCTGCCATaGCCCAGGAGAGCCCAATCC +
Preference number: 4 (lower is better)
Translates to: SPLEFIRRVFSTSRGWHRAPRLP*PRRAQS
Trigger: GGATTGGGCTCTCCTGGGCCATGGCAGCCGAGGCGC...CCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGATGAACTCCAAGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CCA 90 bp GTTGCACCCGAGAACAGTCTCCTGAGACCCTCTTCACGAGCTACGCGGTACAGGGCCCCTGGCTGCCCTTaGCCACACGGTCCCGCACAG +
Preference number: 4 (lower is better)
Translates to: VAPENSLLRPSSRATRYRAPGCP*PHGPAQ
Trigger: CTGTGCGGGACCGTGTGGCCAAGGGCAGCCAGGGGC...CCTGTACCGCGTAGCTCGTGAAGAGGGTCTCAGGAGACTGTTCTCGGGTGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR CCA 90 bp CCCACAGTGACTAAGGCCCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAGTAAGGGGAGAGGCCCCTaGCTGCCCTTGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: PTVTKAPRLDAMVAPENSKGRGP*LPLATR
Trigger: CCGTGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTT...ACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAGTCACTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR CCA 90 bp AGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGAGCAACACCTTCTCGTaGAAGGGGAGAGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: REAEDAASAPSDSLSGRRSNTFS*KGRGPW
Trigger: CCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCT...CCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp AGCCCAGCGACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGAAAGTGAGCACGGTGTaGGGGATGAGGCGGATGCCA +
Preference number: 4 (lower is better)
Translates to: SPATREAEDAASAPSDSLKVSTV*GMRRMP
Trigger: TGGCATCCGCCTCATCCCCCACACCGTGCTCACTTT...CAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGTCGCTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp ATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCAAAGTGAGCACGGTGTaGGGGATGAGGCGGATGCCA +
Preference number: 4 (lower is better)
Translates to: IRPVGLLVGEKALRRNRGKVSTV*GMRRMP
Trigger: TGGCATCCGCCTCATCCCCCACACCGTGCTCACTTT...GCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACGGGGCGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CTCCCGGCATTTATTGATTGCAGCCCCCACAGAGCACACTGCCCTTCCCAGGTGTGCGCGGGACCTCGGTaGCCCTCGACCCTCACCCAC +
Preference number: 4 (lower is better)
Translates to: LPAFIDCSPHRAHCPSQVCAGPR*PSTLTH
Trigger: GTGGGTGAGGGTCGAGGGCCACCGAGGTCCCGCGCA...CACCTGGGAAGGGCAGTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTACTGCCCTTCCCAGGTaGGGTGAAGCCCAGCGACCA +
Preference number: 4 (lower is better)
Translates to: LRCLFIPPSCGVSRGVAATALPR*GEAQRP
Trigger: TGGTCGCTGGGCTTCACCCCACCTGGGAAGGGCAGT...AGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
3UTR CAA 72 bp TGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTaGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: CSSHPAAGSRGE*QLPEDMEGLVA
Trigger: AGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp CTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGCCGAGAACAGTCTCCTaGGACCCTCTTCACGAGCTA +
Preference number: 4 (lower is better)
Translates to: LVHPTQLRGLAGSCSCPRPRTVS*DPLHEL
Trigger: TAGCTCGTGAAGAGGGTCTCAGGAGACTGTTCTCGG...CCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp TGGGCTTGGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGCCCAGCCAACAGCTGGCCCACAGTaGCTAAGGCCCCTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: WAWDSLEEPSVSGLAAQPTAGPQ*LRPLGW
Trigger: CCAGCCGAGGGGCCTTAGTCACTGTGGGCCAGCTGT...TGGCTGGGCTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCCAAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000574129.5
CDS-3UTR TCA 90 bp TCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAACAGTGGAAAACGCCCTaGTACTCCCCCTTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: SHPAAGSRGELQLPEDMEQWKTP*YSPLEF
Trigger: GAACTCCAAGGGGGAGTATCAGGGCGTTTTCCACTG...TTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp TGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCGCAGGCACAATCCCTaGAGACAGAGACCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CVACSSHPAAGSRGELQLRRHNP*RQRPPA
Trigger: AGCAGGCGGTCTCTGTCTTCAGGGATTGTGCCTGCG...CAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp CGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGCAGAAAAGCTGGCCCACAGTaGCTAAGGCCCCTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: RGELQLPEDMEGLVALSRKAGPQ*LRPLGW
Trigger: CCAGCCGAGGGGCCTTAGTCACTGTGGGCCAGCTTT...TCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545862.5
CDS-3UTR TCA 90 bp GTTGCACCCGAGAACAGTCTCCTGAGACCCTCTTCACGAGCTACGCGGTACAGGCCCTTGGCTGTCCCTTaGGCAGGTCCAGCGGGTGCG +
Preference number: 4 (lower is better)
Translates to: VAPENSLLRPSSRATRYRPLAVP*AGPAGA
Trigger: CGCACCCGCTGGACCTGCTCAAGGGACAGCCAAGGG...CCTGTACCGCGTAGCTCGTGAAGAGGGTCTCAGGAGACTGTTCTCGGGTGCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR GCA 90 bp AGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGACCTCCTGCTGCGTCTaGAGATGCACCTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: REAEDAASAPSDSLSGRRTSCCV*RCTLSR
Trigger: CCTGCTCAAGGTGCATCTGCAGACGCAGCAGGAGGT...CCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCGCAGCTTCACCTCCTaGTGCGTCTGCAGATGCACC +
Preference number: 4 (lower is better)
Translates to: GVSRGVAAARGHGRSGCSRSFTS*CVCRCT
Trigger: GGTGCATCTGCAGACGCAGCAGGAGGTGAAGCTGCG...AGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCACAGGCCGCTGTAGAGTaGCAGGATGCCGTCGGTACG +
Preference number: 4 (lower is better)
Translates to: GLAGSCSCPRTWKVWLLSQAAVE*QDAVGT
Trigger: CGTACCGACGGCATCCTGGCACTCTACAGCGGCCTG...TGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp AGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCCCTAGTAGGTCATCTGTCTaGACAGCGAGGCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RQRMQHPPRRTPCRGEGPSRSSV*TARRSG
Trigger: GCCTGAGCGCCTCGCTGTGCAGACAGATGACCTACT...AGGGCCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CTCCCGGCATTTATTGATTGCAGCCCCCACAGAGCACACTGCCCTTCCCAGGTGGCGCATGGGCGTAGTTaGGCCGCTGACCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LPAFIDCSPHRAHCPSQVAHGRS*AADPGA
Trigger: TGCCCCAGGGTCAGCGGCGCAACTACGCCCATGCGC...CACCTGGGAAGGGCAGTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp TCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGCTGGATGCCATGGTTaGACCCGAGAACAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SHPAAGSRGELQLPEDMEAGCHG*TREQSP
Trigger: AGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGC...TTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp TCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCGCTGCACCCACACTCTaGCACCCAAGTCCTCGATGG +
Preference number: 4 (lower is better)
Translates to: SALLVHPTQLRGLAGSCSAAPTL*HPSPRW
Trigger: CCATCGAGGACTTGGGTGGCAGAGTGTGGGTGCAGC...GCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCGCTGCACCCACACTCTaGCACCCAAGTCCTCGATGG +
Preference number: 4 (lower is better)
Translates to: GSRGELQLPEDMEGLVALAAPTL*HPSPRW
Trigger: CCATCGAGGACTTGGGTGGCAGAGTGTGGGTGCAGC...GAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp GAAGATGTTGTCAGAGAGGTACCCGGTGCTAAGGACCAGCTGCTTGGCCTGGTCGCCCCTGGCTGCCCTTaGCCACACGGTCCCGCACAG +
Preference number: 4 (lower is better)
Translates to: EDVVREVPGAKDQLLGLVAPGCP*PHGPAQ
Trigger: CTGTGCGGGACCGTGTGGCCAAGGGCAGCCAGGGGC...GACCAGGCCAAGCAGCTGGTCCTTAGCACCGGGTACCTCTCTGACAACATCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR CCA 90 bp GGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTAGCAACACCTTCTCGTaGAAGGGGAGAGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GVSRGVAAARGHGRSGCSSNTFS*KGRGPW
Trigger: CCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCT...AGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp GACCCTCTTCACGAGCTACGCGGTACAGGCCATCCAGCGCATGGGCGTAGCTGCAGCAACACCTTCTCGTaGAAGGGGAGAGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: DPLHELRGTGHPAHGRSCSNTFS*KGRGPW
Trigger: CCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCT...GCAGCTACGCCCATGCGCTGGATGGCCTGTACCGCGTAGCTCGTGAAGAGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574884.5
CDS-3UTR CCA 90 bp GAGAGCCTGGTAGCCAGAGCGGGGGTGGTGCAGCTACAGCTGAGAGGGGACGAGAGCACATCCAGGGGCTaGCACAGGAACGTGGCACAT +
Preference number: 4 (lower is better)
Translates to: ESLVARAGVVQLQLRGDESTSRG*HRNVAH
Trigger: ATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCT...CTCGTCCCCTCTCAGCTGTAGCTGCACCACCCCCGCTCTGGCTACCAGGCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000574129.5
CDS-3UTR CCA 90 bp ACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAGAGGCGGATGCCAGCTaGGACGAGGCCCTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: TREAEDAASAPSDSLSGREADAS*DEALVK
Trigger: TTTTACAAGGGCCTCGTCCCAGCTGGCATCCGCCTC...TCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp GGCGCTCAGGCCGCTGTAGAGTGCCAGGATGCCGTCGGTACGCACCACCCGCAGAGCCATTCCCACGGCTaGTCAGGATGGCACTTTGAT +
Preference number: 4 (lower is better)
Translates to: GAQAAVECQDAVGTHHPQSHSHG*SGWHFD
Trigger: ATCAAAGTGCCATCCTGACCAGCCGTGGGAATGGCT...CTGCGGGTGGTGCGTACCGACGGCATCCTGGCACTCTACAGCGGCCTGAGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CCA 90 bp CCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTAGCGTGTCTGGCCTaGCAGCCCAGCCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: PGTRLWSALLVHPTQLRGLACLA*QPSHSH
Trigger: GTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAG...ACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTTGGAAGATGCTGCTTTaGGCATCGGGGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LRCLFIPPSCGVSRGVAAWKMLL*ASGAGG
Trigger: GCCTCCTGCCCCCGATGCCCAAAGCAGCATCTTCCA...AGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp TCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAACCGCCTGCTGGTGAGTaGAGAGGCTTTGGCAAAACT +
Preference number: 4 (lower is better)
Translates to: SHPAAGSRGELQLPEDMEPPAGE*RGFGKT
Trigger: AGTTTTGCCAAAGCCTCTCCACTCACCAGCAGGCGG...TTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGGCCATTCCCGCCTGCTGGTGAGTaGAGAGGCTTTGGCAAAACT +
Preference number: 4 (lower is better)
Translates to: LLVGEKALRRNRGPPGPFPPAGE*RGFGKT
Trigger: AGTTTTGCCAAAGCCTCTCCACTCACCAGCAGGCGG...GAATGGCCCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp GGAGAGGCTTTGGCAAAACTAACTGTTAAAGCCACTGCAGGGCAGGCAGCGGTGGAACCGCGGCCCGCCTaGGCCATTCCCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GEALAKLTVKATAGQAAVEPRPA*AIPPGS
Trigger: GCTCCCTGGGGGAATGGCCCAGGCGGGCCGCGGTTC...CACCGCTGCCTGCCCTGCAGTGGCTTTAACAGTTAGTTTTGCCAAAGCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp GTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGACTGCCCTTCCCAGGTaGGGTGAAGCCCAGCGACCA +
Preference number: 4 (lower is better)
Translates to: VSRGVAAARGHGRSGCSQTALPR*GEAQRP
Trigger: TGGTCGCTGGGCTTCACCCCACCTGGGAAGGGCAGT...CTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp CGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCCGAGAACAGTCTCCTaGGACCCTCTTCACGAGCTA +
Preference number: 4 (lower is better)
Translates to: RCLFIPPSCGVSRGVAAAPRTVS*DPLHEL
Trigger: TAGCTCGTGAAGAGGGTCTCAGGAGACTGTTCTCGG...GGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp AGCAACACCTTCTCGTGGAAGGGGAGAGGCCCCTGGCTGCCCTTGGCCACACGGCAGTGGAAAACGCCCTaGTACTCCCCCTTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: SNTFSWKGRGPWLPLATRQWKTP*YSPLEF
Trigger: GAACTCCAAGGGGGAGTATCAGGGCGTTTTCCACTG...CCGTGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR TCA 90 bp TTGGAGTTCATCAGGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGAACGTGCTCTCCTTGCGCCGCTaGCCCTGGGGCAGCTTCACG +
Preference number: 4 (lower is better)
Translates to: LEFIRRVFSTSRGWHRNVLSLRR*PWGSFT
Trigger: CGTGAAGCTGCCCCAGGGTCAGCGGCGCAAGGAGAG...CACGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGATGAACTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574884.5
CDS-3UTR GCA 90 bp GGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCACGCAGCTTCACCTCCTaGTGCGTCTGCAGATGCACC +
Preference number: 4 (lower is better)
Translates to: GLAGSCSCPRTWKVWLLSRSFTS*CVCRCT
Trigger: GGTGCATCTGCAGACGCAGCAGGAGGTGAAGCTGCG...TGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGCAGACGCAGCTTCACCTCCTaGTGCGTCTGCAGATGCACC +
Preference number: 4 (lower is better)
Translates to: RGELQLPEDMEGLVALSRRSFTS*CVCRCT
Trigger: GGTGCATCTGCAGACGCAGCAGGAGGTGAAGCTGCG...TCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp AGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTGCGCCATGCCCGTCATaGGCAGCTTCACCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RHSLVVCVACSSHPAAGSAPCPS*AASPPA
Trigger: AGCAGGAGGTGAAGCTGCGCATGACGGGCATGGCGC...AGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp ACCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATGCGCCATGCCCGTCATaGGCAGCTTCACCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TLGHSLPGTRLWSALLVHAPCPS*AASPPA
Trigger: AGCAGGAGGTGAAGCTGCGCATGACGGGCATGGCGC...ATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CCACCCAAGTCCTCGATGGAAAGTGCTGGAAGATGCTGCTTTGGGCATCGGGGGCCACCCGCAGCGCCATaGCCGTCATGCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PPKSSMESAGRCCFGHRGPPAAP*PSCAAS
Trigger: TGAAGCTGCGCATGACGGGCATGGCGCTGCGGGTGG...CCCCCGATGCCCAAAGCAGCATCTTCCAGCACTTTCCATCGAGGACTTGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR GCA 90 bp CTCCCGGCATTTATTGATTGCAGCCCCCACAGAGCACACTGCCCTTCCCAGGTGCCACCCGCAGCGCCATaGCCGTCATGCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LPAFIDCSPHRAHCPSQVPPAAP*PSCAAS
Trigger: TGAAGCTGCGCATGACGGGCATGGCGCTGCGGGTGG...CACCTGGGAAGGGCAGTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp ACTAAGGCCCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAGTCTCCTGAGACCACCCGCAGCGCCATaGCCGTCATGCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: TKAPRLDAMVAPENSLLRPPAAP*PSCAAS
Trigger: TGAAGCTGCGCATGACGGGCATGGCGCTGCGGGTGG...TCTCAGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR GCA 90 bp ACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGTGTAGAGTGCCAGGATaGCGTCGGTACGCACCACCC +
Preference number: 4 (lower is better)
Translates to: TRLWSALLVHPTQLRGLACRVPG*RRYAPP
Trigger: GGGTGGTGCGTACCGACGGCATCCTGGCACTCTACA...CGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp TGTAAAAGGCCAGAGGCCCGAGCTTCGCTGTCTCCACGGCGCAGTGGAAAACGCCAGGCCGCTGTAGAGTaGCAGGATGCCGTCGGTACG +
Preference number: 4 (lower is better)
Translates to: CKRPEARASLSPRRSGKRQAAVE*QDAVGT
Trigger: CGTACCGACGGCATCCTGGCACTCTACAGCGGCCTG...GCGTTTTCCACTGCGCCGTGGAGACAGCGAAGCTCGGGCCTCTGGCCTTTTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR GCA 90 bp GTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGAGTAGGTCATCTGTCTaGACAGCGAGGCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: VCVACSSHPAAGSRGELQSRSSV*TARRSG
Trigger: GCCTGAGCGCCTCGCTGTGCAGACAGATGACCTACT...CTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GGCGCTCAGGCCGCTGTAGAGTGCCAGGATGCCGTCGGTACGCACCACCCGCAGAGCTTCACGTCGTTCTaGATCCTGACGTTGACCAAG +
Preference number: 4 (lower is better)
Translates to: GAQAAVECQDAVGTHHPQSFTSF*ILTLTK
Trigger: CTTGGTCAACGTCAGGATGCAGAACGACGTGAAGCT...CTGCGGGTGGTGCGTACCGACGGCATCCTGGCACTCTACAGCGGCCTGAGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR GCA 90 bp CCTCTTCACGAGCTACGCGGTACAGGCCATCCAGCGCATGGGCGTAGCTGCCGGGCTGGATGCCATGGTTaGACCCGAGAACAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PLHELRGTGHPAHGRSCRAGCHG*TREQSP
Trigger: AGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGC...CCGGCAGCTACGCCCATGCGCTGGATGGCCTGTACCGCGTAGCTCGTGAAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574884.5
CDS-3UTR GCA 90 bp CCAAGTCCTCGATGGAAAGTGCTGGAAGATGCTGCTTTGGGCATCGGGGGCAGGGTTCCCCTGAGGAGCTaGCAGCGGGAGAGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PSPRWKVLEDAALGIGGRVPLRS*QRERGK
Trigger: CTTGCCCCTCTCCCGCTGGCAGCTCCTCAGGGGAAC...CCTGCCCCCGATGCCCAAAGCAGCATCTTCCAGCACTTTCCATCGAGGACTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR GCA 90 bp GGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAAGTGCTGGAAGATGCTaGTTTGGGCATCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLRCLFIPPSCGVSRGVASAGRC*FGHRGQ
Trigger: CTGCCCCCGATGCCCAAAGCAGCATCTTCCAGCACT...TGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp ACCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATGCGGGGAGTTGCAGCTaGCCGAGGACATGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TLGHSLPGTRLWSALLVHAGSCS*PRTWKV
Trigger: GACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGC...ATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp AGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCCCTGCTTGTGGTCTGCGTTaGTTGTTCATCCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: RQRMQHPPRRTPCRGEGPACGLR*LFIPPS
Trigger: GCTGGGTGGGATGAACAAGCAACGCAGACCACAAGC...AGGGCCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CAGCCGGGAGAGCCTGGTAGCCAGAGCGGGGGTGGTGCAGCTACAGCTGAGAGGCACTCGCTTGTGGTCTaGGTTGCTTGTTCATCCCAC +
Preference number: 4 (lower is better)
Translates to: QPGEPGSQSGGGAATAERHSLVV*VACSSH
Trigger: GTGGGATGAACAAGCAACGCAGACCACAAGCGAGTG...CCTCTCAGCTGTAGCTGCACCACCCCCGCTCTGGCTACCAGGCTCTCCCGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR GCA 90 bp ATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGACCGGCATTTATTGATTaGAGCCCCCACAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: IPPSCGVSRGVAAARGHGPAFID*SPHRAH
Trigger: GTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCGG...TCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GCCCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAGTCTCCTGAGACCCTCTCTGAAGATCTCTCCTTaGGCCGCTGACCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: APRLDAMVAPENSLLRPSLKISP*AADPGA
Trigger: TGCCCCAGGGTCAGCGGCGCAAGGAGAGATCTTCAG...AGAGGGTCTCAGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574884.5
CDS-3UTR GCA 90 bp CCCACAGTGACTAAGGCCCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAGTGCGCATGGGCGTAGCTaGCGGGGACACAGAATGACC +
Preference number: 4 (lower is better)
Translates to: PTVTKAPRLDAMVAPENSAHGRS*RGHRMT
Trigger: GGTCATTCTGTGTCCCCGGCAGCTACGCCCATGCGC...ACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAGTCACTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574884.5
CDS-3UTR CCA 90 bp CCCGAGCTTCGCTGTCTCCACGGCGCAGTGGAAAACGCCCTGATACTCCCCCTTAGCAACACCTTCTCGTaGAAGGGGAGAGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PELRCLHGAVENALILPLSNTFS*KGRGPW
Trigger: CCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCT...AAGGGGGAGTATCAGGGCGTTTTCCACTGCGCCGTGGAGACAGCGAAGCTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CCA 90 bp CTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTCTCGGCTGGATGCCATaGTTGCACCCGAGAACAGTC +
Preference number: 4 (lower is better)
Translates to: LRCLFIPPSCGVSRGVAALGWMP*LHPRTV
Trigger: GACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAG...AGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAGTCTCCTGAGACCCTCTTCCTAAGGCCCCTCGGCTaGATGCCATGGTTGCACCCG +
Preference number: 4 (lower is better)
Translates to: PSAGCHGCTREQSPETLFLRPLG*MPWLHP
Trigger: CGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAG...GAAGAGGGTCTCAGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR CCA 90 bp AGCCCAGCGACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGCCTGATACTCCCCCTTaGAGTTCATCAGGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: SPATREAEDAASAPSDSLPDTPP*SSSGES
Trigger: AGACTCGCCTGATGAACTCCAAGGGGGAGTATCAGG...CAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGTCGCTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp AGCGTGTCTGGCCTGGCAGCCCAGCCATTCCCACGGCTGGTCAGGATGGCACTTAAAGTGAGCACGGTGTaGGGGATGAGGCGGATGCCA +
Preference number: 4 (lower is better)
Translates to: SVSGLAAQPFPRLVRMALKVSTV*GMRRMP
Trigger: TGGCATCCGCCTCATCCCCCACACCGTGCTCACTTT...AAGTGCCATCCTGACCAGCCGTGGGAATGGCTGGGCTGCCAGGCCAGACACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CCA 90 bp AGCCCAGCGACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGAGCCATTCCCACGGCTaGTCAGGATGGCACTTTGAT +
Preference number: 4 (lower is better)
Translates to: SPATREAEDAASAPSDSLSHSHG*SGWHFD
Trigger: ATCAAAGTGCCATCCTGACCAGCCGTGGGAATGGCT...CAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGTCGCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp GCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGAGCCATTCCCACGGCTaGTCAGGATGGCACTTTGAT +
Preference number: 4 (lower is better)
Translates to: ACSSHPAAGSRGELQLPESHSHG*SGWHFD
Trigger: ATCAAAGTGCCATCCTGACCAGCCGTGGGAATGGCT...CTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGGCCATTCAGCAGGTGCTGGGCTTaGGACTCTTTGGAAGAACCT +
Preference number: 4 (lower is better)
Translates to: LLVGEKALRRNRGPPGPFSRCWA*DSLEEP
Trigger: AGGTTCTTCCAAAGAGTCCCAAGCCCAGCACCTGCT...GAATGGCCCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CCAGCCATTCCCACGGCTGGTCAGGATGGCACTTTGATGCCAAAGTTTTTGCGTGCTGCGGAGGACGGGTaGCCACGGCCAGGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: PAIPTAGQDGTLMPKFLRAAEDG*PRPGRS
Trigger: CGACCTCCCTGGCCGTGGCCACCCGTCCTCCGCAGC...ACGCAAAAACTTTGGCATCAAAGTGCCATCCTGACCAGCCGTGGGAATGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CCA 90 bp CGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCAGCTGCCCGAGGACATaGAAGGTCTGGTTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: RCLFIPPSCGVSRGVAAASCPRT*KVWLLS
Trigger: TGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCT...GGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CCAGCGACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGCCAGGCACTCGCTTGTaGTCTGCGTTGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: PATREAEDAASAPSDSLSPGTRL*SALLVH
Trigger: ATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGG...CGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGTCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp GCAGGTGCTGGGCTTGGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGCTCCAGCTAAACCGCTaGCGGAGCCCAGCAACACCT +
Preference number: 4 (lower is better)
Translates to: AGAGLGTLWKNLACLAWQLQLNR*RSPATP
Trigger: AGGTGTTGCTGGGCTCCGTCAGCGGTTTAGCTGGAG...CTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCCAAGCCCAGCACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000574129.5
CDS-3UTR TCA 90 bp CCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGAGACCGCCTGCTGGTaGGTGGAGAGGCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: PLPPRHSLVVCVACSSHPETACW*VERLWQ
Trigger: TTGCCAAAGCCTCTCCACTCACCAGCAGGCGGTCTC...TGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp ACCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCGCAGGCACAATCCCTaGAGACAGAGACCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: TLGHSLPGTRLWSALLVHRRHNP*RQRPPA
Trigger: AGCAGGCGGTCTCTGTCTTCAGGGATTGTGCCTGCG...ATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp CCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTGCTCCCGGCATTTATTaGTTGCAGCCCCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: PGTRLWSALLVHPTQLRGAPGIY*LQPPQS
Trigger: GCTCTGTGGGGGCTGCAATCAATAAATGCCGGGAGC...ACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CCTTGGAGTTCATCAGGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGAACGGCGCCATGCCCGTCATaGGCAGCTTCACCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PWSSSGESSAHPGAGTGTAPCPS*AASPPA
Trigger: AGCAGGAGGTGAAGCTGCGCATGACGGGCATGGCGC...CGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGATGAACTCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR GCA 90 bp GTTGCACCCGAGAACAGTCTCCTGAGACCCTCTTCACGAGCTACGCGGTACAGGGCGCCATGCCCGTCATaGGCAGCTTCACCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VAPENSLLRPSSRATRYRAPCPS*AASPPA
Trigger: AGCAGGAGGTGAAGCTGCGCATGACGGGCATGGCGC...CCTGTACCGCGTAGCTCGTGAAGAGGGTCTCAGGAGACTGTTCTCGGGTGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR GCA 90 bp GCAGGTGCTGGGCTTGGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGTGTAGAGTGCCAGGATaGCGTCGGTACGCACCACCC +
Preference number: 4 (lower is better)
Translates to: AGAGLGTLWKNLACLAWQCRVPG*RRYAPP
Trigger: GGGTGGTGCGTACCGACGGCATCCTGGCACTCTACA...CTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCCAAGCCCAGCACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000574129.5
CDS-3UTR GCA 90 bp AGCCAGGCTGCACCCACACTCTGCCACCCAAGTCCTCGATGGAAAGTGCTGGAAGACGTTGACCAAGTCTaGGGGCGTCCCCACGAAGCC +
Preference number: 4 (lower is better)
Translates to: SQAAPTLCHPSPRWKVLEDVDQV*GRPHEA
Trigger: GGCTTCGTGGGGACGCCCGCAGACTTGGTCAACGTC...TTCCAGCACTTTCCATCGAGGACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR GCA 90 bp CCTTGGAGTTCATCAGGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGAACGGACGTTGACCAAGTCTaGGGGCGTCCCCACGAAGCC +
Preference number: 4 (lower is better)
Translates to: PWSSSGESSAHPGAGTGTDVDQV*GRPHEA
Trigger: GGCTTCGTGGGGACGCCCGCAGACTTGGTCAACGTC...CGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGATGAACTCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR GCA 90 bp ATCAGGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGAACGTGGCACATCCAGACGTTGACCAAGTCTaGGGGCGTCCCCACGAAGCC +
Preference number: 4 (lower is better)
Translates to: IRRVFSTSRGWHRNVAHPDVDQV*GRPHEA
Trigger: GGCTTCGTGGGGACGCCCGCAGACTTGGTCAACGTC...TGGATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR GCA 90 bp TCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAAGCTTCACGTCGTTCTaGATCCTGACGTTGACCAAG +
Preference number: 4 (lower is better)
Translates to: SHPAAGSRGELQLPEDMESFTSF*ILTLTK
Trigger: CTTGGTCAACGTCAGGATGCAGAACGACGTGAAGCT...TTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCTCAGCAGACACGAAGTaGAGAGCTAGCACTTGGGTG +
Preference number: 4 (lower is better)
Translates to: RCLFIPPSCGVSRGVAAASADTK*RASTWV
Trigger: CACCCAAGTGCTAGCTCTGCACTTCGTGTCTGCTGA...GGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCATGGAAGGTCTGGTTaGTCTCAGCAGACACGAAGT +
Preference number: 4 (lower is better)
Translates to: HPPRRTPCRGEGPKEEPRHGRSG*SQQTRS
Trigger: ACTTCGTGTCTGCTGAGAGCAACCAGACCTTCCATG...CCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp TCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAACATGGAAGGTCTGGTTaGTCTCAGCAGACACGAAGT +
Preference number: 4 (lower is better)
Translates to: SHPAAGSRGELQLPEDMEHGRSG*SQQTRS
Trigger: ACTTCGTGTCTGCTGAGAGCAACCAGACCTTCCATG...TTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAACCGGCATTTATTGATTaGAGCCCCCACAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: PGRQRMQHPPRRTPCRGEPAFID*SPHRAH
Trigger: GTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCGG...TTCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGGCCATTCCGTGGCACATCCACCTaGAATAAAGCTGGCGACAAA +
Preference number: 4 (lower is better)
Translates to: LLVGEKALRRNRGPPGPFRGTST*NKAGDK
Trigger: TTTGTCGCCAGCTTTATTGCAGGTGGATGTGCCACG...GAATGGCCCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350690.10
CDS-3UTR CCA 90 bp CCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCTCGGCTGGATGCCATaGTTGCACCCGAGAACAGTC +
Preference number: 4 (lower is better)
Translates to: PWATPSQALACGLRCLFILGWMP*LHPRTV
Trigger: GACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAG...GATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp AGCCAGGCTGCACCCACACTCTGCCACCCAAGTCCTCGATGGAAAGTGCTGGAACTAAGGCCCCTCGGCTaGATGCCATGGTTGCACCCG +
Preference number: 4 (lower is better)
Translates to: SQAAPTLCHPSPRWKVLELRPLG*MPWLHP
Trigger: CGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAG...TTCCAGCACTTTCCATCGAGGACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR CCA 90 bp CCCGCACAGTCTCGTAGATGGCGAACCGAGTCAGGGAGTAGGTCATCTGTCTGCCTAAGGCCCCTCGGCTaGATGCCATGGTTGCACCCG +
Preference number: 4 (lower is better)
Translates to: PAQSRRWRTESGSRSSVCLRPLG*MPWLHP
Trigger: CGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAG...GCAGACAGATGACCTACTCCCTGACTCGGTTCGCCATCTACGAGACTGTGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CCA 90 bp TTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTAGCACATCCAGGGGCTaGCACAGGAACGTGGCACAT +
Preference number: 4 (lower is better)
Translates to: LWSALLVHPTQLRGLAGSSTSRG*HRNVAH
Trigger: ATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCT...ACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp ACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGACCTGATACTCCCCCTTaGAGTTCATCAGGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: TREAEDAASAPSDSLSGRPDTPP*SSSGES
Trigger: AGACTCGCCTGATGAACTCCAAGGGGGAGTATCAGG...TCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp GCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGCAGACAAAGTGAGCACGGTGTaGGGGATGAGGCGGATGCCA +
Preference number: 4 (lower is better)
Translates to: AGSCSCPRTWKVWLLSADKVSTV*GMRRMP
Trigger: TGGCATCCGCCTCATCCCCCACACCGTGCTCACTTT...GTCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp ATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCACGGCTGGTCAGGATaGCACTTTGATGCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: IRPVGLLVGEKALRRNRGHGWSG*HFDAKV
Trigger: AACTTTGGCATCAAAGTGCCATCCTGACCAGCCGTG...GCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACGGGGCGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCACGGCTGGTCAGGATaGCACTTTGATGCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: HPPRRTPCRGEGPKEEPRHGWSG*HFDAKV
Trigger: AACTTTGGCATCAAAGTGCCATCCTGACCAGCCGTG...CCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp AGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGAGCCATTCCCACGGCTaGTCAGGATGGCACTTTGAT +
Preference number: 4 (lower is better)
Translates to: REAEDAASAPSDSLSGRRSHSHG*SGWHFD
Trigger: ATCAAAGTGCCATCCTGACCAGCCGTGGGAATGGCT...CCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCTCGATGGAAAGTGCTaGAAGATGCTGCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: HPPRRTPCRGEGPKEEPRLDGKC*KMLLWA
Trigger: TGCCCAAAGCAGCATCTTCCAGCACTTTCCATCGAG...CCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTGCAGAGCTAGCACTTaGGTGAGCAACAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PRHSLVVCVACSSHPAAGCRAST*VSNSQA
Trigger: AGCCTGGCTGTTGCTCACCCAAGTGCTAGCTCTGCA...CCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp GGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCCCGCCTGCTGGTGAGTaGAGAGGCTTTGGCAAAACT +
Preference number: 4 (lower is better)
Translates to: GSRGELQLPEDMEGLVALPPAGE*RGFGKT
Trigger: AGTTTTGCCAAAGCCTCTCCACTCACCAGCAGGCGG...GAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp TGCCACCCAAGTCCTCGATGGAAAGTGCTGGAAGATGCTGCTTTGGGCATCGGGTCTGCAGATGCACCTTaGGCAGGTCCAGCGGGTGCG +
Preference number: 4 (lower is better)
Translates to: CHPSPRWKVLEDAALGIGSADAP*AGPAGA
Trigger: CGCACCCGCTGGACCTGCTCAAGGTGCATCTGCAGA...CCCGATGCCCAAAGCAGCATCTTCCAGCACTTTCCATCGAGGACTTGGGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR TCA 90 bp GCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGCAGACCCGAGAACAGTCTCCTaGGACCCTCTTCACGAGCTA +
Preference number: 4 (lower is better)
Translates to: AGSCSCPRTWKVWLLSADPRTVS*DPLHEL
Trigger: TAGCTCGTGAAGAGGGTCTCAGGAGACTGTTCTCGG...GTCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp GCCCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAGTCTCCTGAGACCCTCTCCGAGAACAGTCTCCTaGGACCCTCTTCACGAGCTA +
Preference number: 4 (lower is better)
Translates to: APRLDAMVAPENSLLRPSPRTVS*DPLHEL
Trigger: TAGCTCGTGAAGAGGGTCTCAGGAGACTGTTCTCGG...AGAGGGTCTCAGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR TCA 90 bp AGGGCCTGCTGGGCAGACTGTGCAAAGCCTCAGGCCCTTTCTTCTTTGTTCTCTACAGCTGGCCCACAGTaGCTAAGGCCCCTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: RACWADCAKPQALSSLFSTAGPQ*LRPLGW
Trigger: CCAGCCGAGGGGCCTTAGTCACTGTGGGCCAGCTGT...AGAGAACAAAGAAGAAAGGGCCTGAGGCTTTGCACAGTCTGCCCAGCAGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR GCA 90 bp CGGCATTTATTGATTGCAGCCCCCACAGAGCACACTGCCCTTCCCAGGTGGGGTTGTAGAGTGCCAGGATaGCGTCGGTACGCACCACCC +
Preference number: 4 (lower is better)
Translates to: RHLLIAAPTEHTALPRWGCRVPG*RRYAPP
Trigger: GGGTGGTGCGTACCGACGGCATCCTGGCACTCTACA...ACCCCACCTGGGAAGGGCAGTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CCTTGGAGTTCATCAGGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGAACGTGTAGAGTGCCAGGATaGCGTCGGTACGCACCACCC +
Preference number: 4 (lower is better)
Translates to: PWSSSGESSAHPGAGTGTCRVPG*RRYAPP
Trigger: GGGTGGTGCGTACCGACGGCATCCTGGCACTCTACA...CGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGATGAACTCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR GCA 90 bp CCCACAGTGACTAAGGCCCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAGTAGTAGGTCATCTGTCTaGACAGCGAGGCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PTVTKAPRLDAMVAPENSSRSSV*TARRSG
Trigger: GCCTGAGCGCCTCGCTGTGCAGACAGATGACCTACT...ACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAGTCACTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR GCA 90 bp GAGGCTTTGGCAAAACTAACTGTTAAAGCCACTGCAGGGCAGGCAGCGGTGCGCGGCCCCTCGGCTGGATaGCATGGTTGCACCCGAGAA +
Preference number: 4 (lower is better)
Translates to: EALAKLTVKATAGQAAVRGPSAG*HGCTRE
Trigger: TTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCC...GCGCACCGCTGCCTGCCCTGCAGTGGCTTTAACAGTTAGTTTTGCCAAAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp AAGATGTTGTCAGAGAGGTACCCGGTGCTAAGGACCAGCTGCTTGGCCTGGTCGGGCCCCTCGGCTGGATaGCATGGTTGCACCCGAGAA +
Preference number: 4 (lower is better)
Translates to: KMLSERYPVLRTSCLAWSGPSAG*HGCTRE
Trigger: TTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCC...CGACCAGGCCAAGCAGCTGGTCCTTAGCACCGGGTACCTCTCTGACAACATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR GCA 90 bp CGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGCAGAGAAAGTGCTGGAAGATaGTGCTTTGGGCATCGGGGG +
Preference number: 4 (lower is better)
Translates to: RGELQLPEDMEGLVALSRESAGR*CFGHRG
Trigger: CCCCCGATGCCCAAAGCAGCATCTTCCAGCACTTTC...TCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGCAGACGAAAGTGCTGGAAGATaGTGCTTTGGGCATCGGGGG +
Preference number: 4 (lower is better)
Translates to: AGSCSCPRTWKVWLLSADESAGR*CFGHRG
Trigger: CCCCCGATGCCCAAAGCAGCATCTTCCAGCACTTTC...GTCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCGTCCTCGATGGAAAGTaGTGGAAGATGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: ALLVHPTQLRGLAGSCSCVLDGK*WKMLLW
Trigger: CCAAAGCAGCATCTTCCAGCACTTTCCATCGAGGAC...GCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGTCCTCGATGGAAAGTaGTGGAAGATGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: AAGSRGELQLPEDMEGLVVLDGK*WKMLLW
Trigger: CCAAAGCAGCATCTTCCAGCACTTTCCATCGAGGAC...AACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp TTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTGCTTGTGGTCTGCGTTaGTTGTTCATCCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: LWSALLVHPTQLRGLAGSACGLR*LFIPPS
Trigger: GCTGGGTGGGATGAACAAGCAACGCAGACCACAAGC...ACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CCCACAGTGACTAAGGCCCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAGTACCTCCTGCTGCGTCTaGAGATGCACCTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PTVTKAPRLDAMVAPENSTSCCV*RCTWPS
Trigger: TGAAGGCCAGGTGCATCTGCAGACGCAGCAGGAGGT...ACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAGTCACTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CCA 90 bp GGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGCCCAGCCATTCCCACCTCGGCTGGATGCCATaGTTGCACCCGAGAACAGTC +
Preference number: 4 (lower is better)
Translates to: GTLWKNLACLAWQPSHSHLGWMP*LHPRTV
Trigger: GACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAG...GTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000574129.5
CDS-3UTR CCA 90 bp CCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAGTCTCCTGAGACCCTCTTCCTCGGCTGGATGCCATaGTTGCACCCGAGAACAGTC +
Preference number: 4 (lower is better)
Translates to: PSAGCHGCTREQSPETLFLGWMP*LHPRTV
Trigger: GACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAG...GAAGAGGGTCTCAGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR CCA 90 bp GCTAGCACTTGGGTGAGCAACAGCCAGGCTGCACCCACACTCTGCCACCCAAGTAGCACATCCAGGGGCTaGCACAGGAACGTGGCACAT +
Preference number: 4 (lower is better)
Translates to: ASTWVSNSQAAPTLCHPSSTSRG*HRNVAH
Trigger: ATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCT...ACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCTGTTGCTCACCCAAGTGCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR CCA 90 bp GCAGGTGCTGGGCTTGGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGGAGGCGGATGCCAGCTaGGACGAGGCCCTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: AGAGLGTLWKNLACLAWQEADAS*DEALVK
Trigger: TTTTACAAGGGCCTCGTCCCAGCTGGCATCCGCCTC...CTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCCAAGCCCAGCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000574129.5
CDS-3UTR CCA 90 bp CATGGTTGCACCCGAGAACAGTCTCCTGAGACCCTCTTCACGAGCTACGCGGTACTAGCGTGTCTGGCCTaGCAGCCCAGCCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: HGCTREQSPETLFTSYAVLACLA*QPSHSH
Trigger: GTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAG...TACCGCGTAGCTCGTGAAGAGGGTCTCAGGAGACTGTTCTCGGGTGCAACCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CCA 90 bp GGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTAGCAGGTGCTGGGCTTaGGACTCTTTGGAAGAACCT +
Preference number: 4 (lower is better)
Translates to: GVSRGVAAARGHGRSGCSSRCWA*DSLEEP
Trigger: AGGTTCTTCCAAAGAGTCCCAAGCCCAGCACCTGCT...AGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp ACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGACTCGATGGAAAGTGCTaGAAGATGCTGCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: TREAEDAASAPSDSLSGRLDGKC*KMLLWA
Trigger: TGCCCAAAGCAGCATCTTCCAGCACTTTCCATCGAG...TCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCTGCAGAGCTAGCACTTaGGTGAGCAACAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PWATPSQALACGLRCLFICRAST*VSNSQA
Trigger: AGCCTGGCTGTTGCTCACCCAAGTGCTAGCTCTGCA...GATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp GTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGTGCAGAGCTAGCACTTaGGTGAGCAACAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VSRGVAAARGHGRSGCSQCRAST*VSNSQA
Trigger: AGCCTGGCTGTTGCTCACCCAAGTGCTAGCTCTGCA...CTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp GGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTAGGACATGGAAGGTCTaGTTGCTCTCAGCAGACACG +
Preference number: 4 (lower is better)
Translates to: GVSRGVAAARGHGRSGCSRTWKV*LLSADT
Trigger: CGTGTCTGCTGAGAGCAACCAGACCTTCCATGTCCT...AGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp GGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGGACATGGAAGGTCTaGTTGCTCTCAGCAGACACG +
Preference number: 4 (lower is better)
Translates to: GSRGELQLPEDMEGLVALRTWKV*LLSADT
Trigger: CGTGTCTGCTGAGAGCAACCAGACCTTCCATGTCCT...GAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp GAGAGCCTGGTAGCCAGAGCGGGGGTGGTGCAGCTACAGCTGAGAGGGGACGAGTGGCGACAAAGTGAGTaGAGATGTTGTCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: ESLVARAGVVQLQLRGDEWRQSE*RCCQRG
Trigger: ACCTCTCTGACAACATCTTCACTCACTTTGTCGCCA...CTCGTCCCCTCTCAGCTGTAGCTGCACCACCCCCGCTCTGGCTACCAGGCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000574129.5
CDS-3UTR TCA 90 bp GGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGCCCAGCCATTCCCACCAGTGGAAAACGCCCTaGTACTCCCCCTTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: GTLWKNLACLAWQPSHSHQWKTP*YSPLEF
Trigger: GAACTCCAAGGGGGAGTATCAGGGCGTTTTCCACTG...GTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000574129.5
CDS-3UTR TCA 90 bp GAGGCTTTGGCAAAACTAACTGTTAAAGCCACTGCAGGGCAGGCAGCGGTGCGCGAGACCGCCTGCTGGTaGGTGGAGAGGCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: EALAKLTVKATAGQAAVRETACW*VERLWQ
Trigger: TTGCCAAAGCCTCTCCACTCACCAGCAGGCGGTCTC...GCGCACCGCTGCCTGCCCTGCAGTGGCTTTAACAGTTAGTTTTGCCAAAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp CCACCCAAGTCCTCGATGGAAAGTGCTGGAAGATGCTGCTTTGGGCATCGGGGGGCTCCCGGCATTTATTaGTTGCAGCCCCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: PPKSSMESAGRCCFGHRGAPGIY*LQPPQS
Trigger: GCTCTGTGGGGGCTGCAATCAATAAATGCCGGGAGC...CCCCCGATGCCCAAAGCAGCATCTTCCAGCACTTTCCATCGAGGACTTGGGTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR TCA 90 bp CATGGTTGCACCCGAGAACAGTCTCCTGAGACCCTCTTCACGAGCTACGCGGTAGCCGGGGACACAGAATaGCCACATGAGACTCCCCCT +
Preference number: 4 (lower is better)
Translates to: HGCTREQSPETLFTSYAVAGDTE*PHETPP
Trigger: AGGGGGAGTCTCATGTGGTCATTCTGTGTCCCCGGC...TACCGCGTAGCTCGTGAAGAGGGTCTCAGGAGACTGTTCTCGGGTGCAACCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574884.5
CDS-3UTR GCA 90 bp CGGCATTTATTGATTGCAGCCCCCACAGAGCACACTGCCCTTCCCAGGTGGGGTACCTCCTGCTGCGTCTaGAGATGCACCTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RHLLIAAPTEHTALPRWGTSCCV*RCTLSR
Trigger: CCTGCTCAAGGTGCATCTGCAGACGCAGCAGGAGGT...ACCCCACCTGGGAAGGGCAGTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp AGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTAGCTTCACCTCCTGCTaGGTCTGCAGATGCACCTTG +
Preference number: 4 (lower is better)
Translates to: RHSLVVCVACSSHPAAGSSFTSC*VCRCTL
Trigger: CAAGGTGCATCTGCAGACGCAGCAGGAGGTGAAGCT...AGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp AGCAACAGCCAGGCTGCACCCACACTCTGCCACCCAAGTCCTCGATGGAAAGTGAGTAGGTCATCTGTCTaGACAGCGAGGCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SNSQAAPTLCHPSPRWKVSRSSV*TARRSG
Trigger: GCCTGAGCGCCTCGCTGTGCAGACAGATGACCTACT...CACTTTCCATCGAGGACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCTGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR GCA 90 bp AGGGCCTGCTGGGCAGACTGTGCAAAGCCTCAGGCCCTTTCTTCTTTGTTCTCTGGCCCCTCGGCTGGATaGCATGGTTGCACCCGAGAA +
Preference number: 4 (lower is better)
Translates to: RACWADCAKPQALSSLFSGPSAG*HGCTRE
Trigger: TTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCC...AGAGAACAAAGAAGAAAGGGCCTGAGGCTTTGCACAGTCTGCCCAGCAGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR GCA 90 bp AGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTGCTTGTGGTCTGCGTTaGTTGTTCATCCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: RHSLVVCVACSSHPAAGSACGLR*LFIPPS
Trigger: GCTGGGTGGGATGAACAAGCAACGCAGACCACAAGC...AGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCACCGGCATTTATTGATTaGAGCCCCCACAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: GLAGSCSCPRTWKVWLLSPAFID*SPHRAH
Trigger: GTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCGG...TGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GACCCTCTTCACGAGCTACGCGGTACAGGCCATCCAGCGCATGGGCGTAGCTGCCGTGGCACATCCACCTaGAATAAAGCTGGCGACAAA +
Preference number: 4 (lower is better)
Translates to: DPLHELRGTGHPAHGRSCRGTST*NKAGDK
Trigger: TTTGTCGCCAGCTTTATTGCAGGTGGATGTGCCACG...GCAGCTACGCCCATGCGCTGGATGGCCTGTACCGCGTAGCTCGTGAAGAGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574884.5
CDS-3UTR CCA 90 bp CGCCTGCTGGTGAGTGGAGAGGCTTTGGCAAAACTAACTGTTAAAGCCACTGCAGCGCCTCGGCTGCCATaGCCCAGGAGAGCCCAATCC +
Preference number: 4 (lower is better)
Translates to: RLLVSGEALAKLTVKATAAPRLP*PRRAQS
Trigger: GGATTGGGCTCTCCTGGGCCATGGCAGCCGAGGCGC...TGCAGTGGCTTTAACAGTTAGTTTTGCCAAAGCCTCTCCACTCACCAGCAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp TGCCACCCAAGTCCTCGATGGAAAGTGCTGGAAGATGCTGCTTTGGGCATCGGGGCTGGCACAGGAACGTaGCACATCCACCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: CHPSPRWKVLEDAALGIGAGTGT*HIHPEE
Trigger: CTCCTCAGGGTGGATGTGCCACGTTCCTGTGCCAGC...CCCGATGCCCAAAGCAGCATCTTCCAGCACTTTCCATCGAGGACTTGGGTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331531.9
CDS-3UTR CCA 90 bp ACTAAGGCCCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAGTCTCCTGAGAAGCACATCCAGGGGCTaGCACAGGAACGTGGCACAT +
Preference number: 4 (lower is better)
Translates to: TKAPRLDAMVAPENSLLRSTSRG*HRNVAH
Trigger: ATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCT...TCTCAGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR CCA 90 bp ACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGCCTGATACTCCCCCTTaGAGTTCATCAGGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: TRLWSALLVHPTQLRGLAPDTPP*SSSGES
Trigger: AGACTCGCCTGATGAACTCCAAGGGGGAGTATCAGG...CGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp AGCAACAGCCAGGCTGCACCCACACTCTGCCACCCAAGTCCTCGATGGAAAGTGGAGGCGGATGCCAGCTaGGACGAGGCCCTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: SNSQAAPTLCHPSPRWKVEADAS*DEALVK
Trigger: TTTTACAAGGGCCTCGTCCCAGCTGGCATCCGCCTC...CACTTTCCATCGAGGACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCTGTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR CCA 90 bp GGAGAGGCTTTGGCAAAACTAACTGTTAAAGCCACTGCAGGGCAGGCAGCGGTGCTAGCGTGTCTGGCCTaGCAGCCCAGCCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: GEALAKLTVKATAGQAAVLACLA*QPSHSH
Trigger: GTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAG...CACCGCTGCCTGCCCTGCAGTGGCTTTAACAGTTAGTTTTGCCAAAGCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTAGCAGGTGCTGGGCTTaGGACTCTTTGGAAGAACCT +
Preference number: 4 (lower is better)
Translates to: PGTRLWSALLVHPTQLRGSRCWA*DSLEEP
Trigger: AGGTTCTTCCAAAGAGTCCCAAGCCCAGCACCTGCT...ACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp GGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAAGGACATGGAAGGTCTaGTTGCTCTCAGCAGACACG +
Preference number: 4 (lower is better)
Translates to: GLAGSCSCPRTWKVWLLSRTWKV*LLSADT
Trigger: CGTGTCTGCTGAGAGCAACCAGACCTTCCATGTCCT...TGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp TCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGCCCAGCCATTCCCACGGCTGAGCTGCCCGAGGACATaGAAGGTCTGGTTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SLEEPSVSGLAAQPFPRLSCPRT*KVWLLS
Trigger: TGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCT...CAGCCGTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR CCA 90 bp GTGACTAAGGCCCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAGTCTCCTGGAAAACAACGCCCCTTaGCTGTCCCTTGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: VTKAPRLDAMVAPENSLLENNAP*LSLEQV
Trigger: GACCTGCTCAAGGGACAGCCAAGGGGCGTTGTTTTC...CAGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR TCA 90 bp GGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTTGGCGACAAAGTGAGTaGAGATGTTGTCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GVSRGVAAARGHGRSGCSWRQSE*RCCQRG
Trigger: ACCTCTCTGACAACATCTTCACTCACTTTGTCGCCA...AGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR TCA 90 bp CATCCAGCGCATGGGCGTAGTTGCGCCGCTGACCCTGGGGCAGCTTCACGTCGTGTCAGGATGGCACTTTaGTGCCAAAGTTTTTGCGTA +
Preference number: 4 (lower is better)
Translates to: HPAHGRSCAADPGAASRRVRMAL*CQSFCV
Trigger: TACGCAAAAACTTTGGCATCAAAGTGCCATCCTGAC...ACGACGTGAAGCTGCCCCAGGGTCAGCGGCGCAACTACGCCCATGCGCTGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR GCA 90 bp TGCCACCCAAGTCCTCGATGGAAAGTGCTGGAAGATGCTGCTTTGGGCATCGGGACCTCCTGCTGCGTCTaGAGATGCACCTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: CHPSPRWKVLEDAALGIGTSCCV*RCTLSR
Trigger: CCTGCTCAAGGTGCATCTGCAGACGCAGCAGGAGGT...CCCGATGCCCAAAGCAGCATCTTCCAGCACTTTCCATCGAGGACTTGGGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR GCA 90 bp AAGATGTTGTCAGAGAGGTACCCGGTGCTAAGGACCAGCTGCTTGGCCTGGTCGAGTAGGTCATCTGTCTaGACAGCGAGGCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: KMLSERYPVLRTSCLAWSSRSSV*TARRSG
Trigger: GCCTGAGCGCCTCGCTGTGCAGACAGATGACCTACT...CGACCAGGCCAAGCAGCTGGTCCTTAGCACCGGGTACCTCTCTGACAACATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR GCA 90 bp CCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCAGCTTCACGTCGTTCTaGATCCTGACGTTGACCAAG +
Preference number: 4 (lower is better)
Translates to: PWATPSQALACGLRCLFISFTSF*ILTLTK
Trigger: CTTGGTCAACGTCAGGATGCAGAACGACGTGAAGCT...GATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CCCGCACAGTCTCGTAGATGGCGAACCGAGTCAGGGAGTAGGTCATCTGTCTGCGCTGGATGCCATGGTTaGACCCGAGAACAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PAQSRRWRTESGSRSSVCAGCHG*TREQSP
Trigger: AGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGC...GCAGACAGATGACCTACTCCCTGACTCGGTTCGCCATCTACGAGACTGTGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR GCA 90 bp CGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGCAGAGTCCTCGATGGAAAGTaGTGGAAGATGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RGELQLPEDMEGLVALSRVLDGK*WKMLLW
Trigger: CCAAAGCAGCATCTTCCAGCACTTTCCATCGAGGAC...TCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp AGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTTCAGCAGACACGAAGTaGAGAGCTAGCACTTGGGTG +
Preference number: 4 (lower is better)
Translates to: RHSLVVCVACSSHPAAGSSADTK*RASTWV
Trigger: CACCCAAGTGCTAGCTCTGCACTTCGTGTCTGCTGA...AGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp TGGGCTTGGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGCCCAGCCACACTCGCTTGTGGTCTaGGTTGCTTGTTCATCCCAC +
Preference number: 4 (lower is better)
Translates to: WAWDSLEEPSVSGLAAQPHSLVV*VACSSH
Trigger: GTGGGATGAACAAGCAACGCAGACCACAAGCGAGTG...TGGCTGGGCTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCCAAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR GCA 90 bp ACCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCACTCGCTTGTGGTCTaGGTTGCTTGTTCATCCCAC +
Preference number: 4 (lower is better)
Translates to: TLGHSLPGTRLWSALLVHHSLVV*VACSSH
Trigger: GTGGGATGAACAAGCAACGCAGACCACAAGCGAGTG...ATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp AGCCAGGCTGCACCCACACTCTGCCACCCAAGTCCTCGATGGAAAGTGCTGGAAGCACAGTCTCGTAGATaGCGAACCGAGTCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SQAAPTLCHPSPRWKVLEAQSRR*RTESGS
Trigger: ACTCCCTGACTCGGTTCGCCATCTACGAGACTGTGC...TTCCAGCACTTTCCATCGAGGACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR CCA 90 bp GAGCACGGTGTGGGGGATGAGGCGGATGCCAGCTGGGACGAGGCCCTTGTAAAACACGGCTGGTCAGGATaGCACTTTGATGCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: EHGVGDEADASWDEALVKHGWSG*HFDAKV
Trigger: AACTTTGGCATCAAAGTGCCATCCTGACCAGCCGTG...TTTTACAAGGGCCTCGTCCCAGCTGGCATCCGCCTCATCCCCCACACCGTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CCA 90 bp ACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGCTCGATGGAAAGTGCTaGAAGATGCTGCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: TRLWSALLVHPTQLRGLALDGKC*KMLLWA
Trigger: TGCCCAAAGCAGCATCTTCCAGCACTTTCCATCGAG...CGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp GGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGCCCAGCCATTCCCACCCAGGCACTCGCTTGTaGTCTGCGTTGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: GTLWKNLACLAWQPSHSHPGTRL*SALLVH
Trigger: ATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGG...GTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR TCA 90 bp CGCCTGCTGGTGAGTGGAGAGGCTTTGGCAAAACTAACTGTTAAAGCCACTGCATGGTGCAGCTACAGCTaGGAGGGGACGAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RLLVSGEALAKLTVKATAWCSYS*EGTRPG
Trigger: TCCTGGCCTCGTCCCCTCTCAGCTGTAGCTGCACCA...TGCAGTGGCTTTAACAGTTAGTTTTGCCAAAGCCTCTCCACTCACCAGCAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp ACCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATAGCTTCACGTCGTTCTaGATCCTGACGTTGACCAAG +
Preference number: 4 (lower is better)
Translates to: TLGHSLPGTRLWSALLVHSFTSF*ILTLTK
Trigger: CTTGGTCAACGTCAGGATGCAGAACGACGTGAAGCT...ATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CCCACAGTGACTAAGGCCCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAGTAGCTTCACGTCGTTCTaGATCCTGACGTTGACCAAG +
Preference number: 4 (lower is better)
Translates to: PTVTKAPRLDAMVAPENSSFTSF*ILTLTK
Trigger: CTTGGTCAACGTCAGGATGCAGAACGACGTGAAGCT...ACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAGTCACTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR GCA 90 bp TGCCACCCAAGTCCTCGATGGAAAGTGCTGGAAGATGCTGCTTTGGGCATCGGGGCTGGATGCCATGGTTaGACCCGAGAACAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: CHPSPRWKVLEDAALGIGAGCHG*TREQSP
Trigger: AGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGC...CCCGATGCCCAAAGCAGCATCTTCCAGCACTTTCCATCGAGGACTTGGGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR GCA 90 bp CGCCTGCTGGTGAGTGGAGAGGCTTTGGCAAAACTAACTGTTAAAGCCACTGCATTCATCCCACCCAGCTaGGGGGTCTCGCGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: RLLVSGEALAKLTVKATAFIPPS*GVSRGV
Trigger: AACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAA...TGCAGTGGCTTTAACAGTTAGTTTTGCCAAAGCCTCTCCACTCACCAGCAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp ACGAAGCCTCCAGCTAAACCGCTGACGGAGCCCAGCAACACCTTCTCGTGGAAGAGTCCCCTCAAAGGCTaGTGGAATACAAGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TKPPAKPLTEPSNTFSWKSPLKG*WNTSPL
Trigger: CAGGGGACTTGTATTCCAGCAGCCTTTGAGGGGACT...CTTCCACGAGAAGGTGTTGCTGGGCTCCGTCAGCGGTTTAGCTGGAGGCTTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CCA 90 bp ATCAGGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGAACGTGGCACATCCAAGCAGGTGCTGGGCTTaGGACTCTTTGGAAGAACCT +
Preference number: 4 (lower is better)
Translates to: IRRVFSTSRGWHRNVAHPSRCWA*DSLEEP
Trigger: AGGTTCTTCCAAAGAGTCCCAAGCCCAGCACCTGCT...TGGATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CCA 90 bp ACCGCTGACGGAGCCCAGCAACACCTTCTCGTGGAAGGGGAGAGGCCCCTGGCTCTTCTTTGTTCTCTGTaGCAAGACACGGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: TADGAQQHLLVEGERPLALLCSL*QDTVRK
Trigger: TTTTCTGACCGTGTCTTGCCACAGAGAACAAAGAAG...AGCCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCTGGGCTCCGTCAGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CCA 90 bp CATGGTTGCACCCGAGAACAGTCTCCTGAGACCCTCTTCACGAGCTACGCGGTACCCCTCAAAGGCTGCTaGAATACAAGTCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HGCTREQSPETLFTSYAVPLKGC*NTSPLD
Trigger: GTCCAGGGGACTTGTATTCCAGCAGCCTTTGAGGGG...TACCGCGTAGCTCGTGAAGAGGGTCTCAGGAGACTGTTCTCGGGTGCAACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR TCA 90 bp TGGGCTTGGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGCCCAGCCATGGCGACAAAGTGAGTaGAGATGTTGTCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: WAWDSLEEPSVSGLAAQPWRQSE*RCCQRG
Trigger: ACCTCTCTGACAACATCTTCACTCACTTTGTCGCCA...TGGCTGGGCTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCCAAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000574129.5
CDS-3UTR TCA 90 bp CCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCGTCAGGATGGCACTTTaGTGCCAAAGTTTTTGCGTA +
Preference number: 4 (lower is better)
Translates to: PWATPSQALACGLRCLFIVRMAL*CQSFCV
Trigger: TACGCAAAAACTTTGGCATCAAAGTGCCATCCTGAC...GATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp TTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTGTCAGGATGGCACTTTaGTGCCAAAGTTTTTGCGTA +
Preference number: 4 (lower is better)
Translates to: LWSALLVHPTQLRGLAGSVRMAL*CQSFCV
Trigger: TACGCAAAAACTTTGGCATCAAAGTGCCATCCTGAC...ACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR TCA 90 bp ACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGTCAGGATGGCACTTTaGTGCCAAAGTTTTTGCGTA +
Preference number: 4 (lower is better)
Translates to: TRLWSALLVHPTQLRGLAVRMAL*CQSFCV
Trigger: TACGCAAAAACTTTGGCATCAAAGTGCCATCCTGAC...CGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp GGAGAGGCTTTGGCAAAACTAACTGTTAAAGCCACTGCAGGGCAGGCAGCGGTGAGCTTCACCTCCTGCTaGGTCTGCAGATGCACCTTG +
Preference number: 4 (lower is better)
Translates to: GEALAKLTVKATAGQAAVSFTSC*VCRCTL
Trigger: CAAGGTGCATCTGCAGACGCAGCAGGAGGTGAAGCT...CACCGCTGCCTGCCCTGCAGTGGCTTTAACAGTTAGTTTTGCCAAAGCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CAGGAACGTGGCACATCCACCTGCAATAAAGCTGGCGACAAAGTGAGTGAAGATCAGGCCGCTGTAGAGTaGCAGGATGCCGTCGGTACG +
Preference number: 4 (lower is better)
Translates to: QERGTSTCNKAGDKVSEDQAAVE*QDAVGT
Trigger: CGTACCGACGGCATCCTGGCACTCTACAGCGGCCTG...ATCTTCACTCACTTTGTCGCCAGCTTTATTGCAGGTGGATGTGCCACGTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR GCA 90 bp GAGGCTTTGGCAAAACTAACTGTTAAAGCCACTGCAGGGCAGGCAGCGGTGCGCTCAGCAGACACGAAGTaGAGAGCTAGCACTTGGGTG +
Preference number: 4 (lower is better)
Translates to: EALAKLTVKATAGQAAVRSADTK*RASTWV
Trigger: CACCCAAGTGCTAGCTCTGCACTTCGTGTCTGCTGA...GCGCACCGCTGCCTGCCCTGCAGTGGCTTTAACAGTTAGTTTTGCCAAAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR GCA 90 bp CTCCCGGCATTTATTGATTGCAGCCCCCACAGAGCACACTGCCCTTCCCAGGTGCATGGAAGGTCTGGTTaGTCTCAGCAGACACGAAGT +
Preference number: 4 (lower is better)
Translates to: LPAFIDCSPHRAHCPSQVHGRSG*SQQTRS
Trigger: ACTTCGTGTCTGCTGAGAGCAACCAGACCTTCCATG...CACCTGGGAAGGGCAGTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp CCAGCCATTCCCACGGCTGGTCAGGATGGCACTTTGATGCCAAAGTTTTTGCGTCTCGGCTGGATGCCATaGTTGCACCCGAGAACAGTC +
Preference number: 4 (lower is better)
Translates to: PAIPTAGQDGTLMPKFLRLGWMP*LHPRTV
Trigger: GACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAG...ACGCAAAAACTTTGGCATCAAAGTGCCATCCTGACCAGCCGTGGGAATGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CCA 90 bp CTGATACTCCCCCTTGGAGTTCATCAGGCGAGTCTTCAGCACATCCAGGGGCTGCCTGATACTCCCCCTTaGAGTTCATCAGGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: LILPLGVHQASLQHIQGLPDTPP*SSSGES
Trigger: AGACTCGCCTGATGAACTCCAAGGGGGAGTATCAGG...CAGCCCCTGGATGTGCTGAAGACTCGCCTGATGAACTCCAAGGGGGAGTATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CCA 90 bp CGCCTGCTGGTGAGTGGAGAGGCTTTGGCAAAACTAACTGTTAAAGCCACTGCATGGAAGATGCTGCTTTaGGCATCGGGGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RLLVSGEALAKLTVKATAWKMLL*ASGAGG
Trigger: GCCTCCTGCCCCCGATGCCCAAAGCAGCATCTTCCA...TGCAGTGGCTTTAACAGTTAGTTTTGCCAAAGCCTCTCCACTCACCAGCAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CCA 90 bp TGTGGCAGCTCCCGGCATTTATTGATTGCAGCCCCCACAGAGCACACTGCCCTTCCAGGCACTCGCTTGTaGTCTGCGTTGCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: CGSSRHLLIAAPTEHTALPGTRL*SALLVH
Trigger: ATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGG...AAGGGCAGTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCGGGAGCTGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545862.5
3UTR CAA 72 bp CAGATGCACCTGGCCTTCACGCAGCGACCAGCATTGTaGCTCATTAGTAAAGCCAGTCCCCTCAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QMHLAFTQRPAL*LISKASPLKGC
Trigger: GCAGCCTTTGAGGGGACTGGCTTTACTAATGAGCAACAATGCTGGTCGCTGCGTGAAGGCCAGGTGCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR CAA 72 bp CTGCAGATGCACCTGGCCTTCACGCAGCGACCAGCATaGTTGCTCATTAGTAAAGCCAGTCCCCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LQMHLAFTQRPA*LLISKASPLKG
Trigger: GCCTTTGAGGGGACTGGCTTTACTAATGAGCAACAATGCTGGTCGCTGCGTGAAGGCCAGGTGCATCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR TCA 90 bp ATCAGGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGAACGTGGCACATCCATGGCGACAAAGTGAGTaGAGATGTTGTCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: IRRVFSTSRGWHRNVAHPWRQSE*RCCQRG
Trigger: ACCTCTCTGACAACATCTTCACTCACTTTGTCGCCA...TGGATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS-3UTR CCA 90 bp TGCCACCCAAGTCCTCGATGGAAAGTGCTGGAAGATGCTGCTTTGGGCATCGGGCACGGCTGGTCAGGATaGCACTTTGATGCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: CHPSPRWKVLEDAALGIGHGWSG*HFDAKV
Trigger: AACTTTGGCATCAAAGTGCCATCCTGACCAGCCGTG...CCCGATGCCCAAAGCAGCATCTTCCAGCACTTTCCATCGAGGACTTGGGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR GCA 90 bp GCAGTGGAAAACGCCCTGATACTCCCCCTTGGAGTTCATCAGGCGAGTCTTCAGCGTGGCACATCCACCTaGAATAAAGCTGGCGACAAA +
Preference number: 4 (lower is better)
Translates to: AVENALILPLGVHQASLQRGTST*NKAGDK
Trigger: TTTGTCGCCAGCTTTATTGCAGGTGGATGTGCCACG...CTGAAGACTCGCCTGATGAACTCCAAGGGGGAGTATCAGGGCGTTTTCCACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR GCA 90 bp CCCGCACAGTCTCGTAGATGGCGAACCGAGTCAGGGAGTAGGTCATCTGTCTGCAGCGACCAGCATTGTTaGTCATTAGTAAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: PAQSRRWRTESGSRSSVCSDQHC*SLVKPV
Trigger: GACTGGCTTTACTAATGAGCAACAATGCTGGTCGCT...GCAGACAGATGACCTACTCCCTGACTCGGTTCGCCATCTACGAGACTGTGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR GCA 90 bp CAGGAACGTGGCACATCCACCTGCAATAAAGCTGGCGACAAAGTGAGTGAAGATAGCTTCACCTCCTGCTaGGTCTGCAGATGCACCTGG +
Preference number: 4 (lower is better)
Translates to: QERGTSTCNKAGDKVSEDSFTSC*VCRCTW
Trigger: CCAGGTGCATCTGCAGACGCAGCAGGAGGTGAAGCT...ATCTTCACTCACTTTGTCGCCAGCTTTATTGCAGGTGGATGTGCCACGTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
3UTR CAA 72 bp AGCCCAGCCATTCCCACGGCTGGTCAGGATGGCACTTaGATGCCAAAGTTTTTGCGTAGCTGTTCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SPAIPTAGQDGT*MPKFLRSCSRN
Trigger: GTTTCTGGAACAGCTACGCAAAAACTTTGGCATCAAAGTGCCATCCTGACCAGCCGTGGGAATGGCTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR TCA 90 bp CAGGAACGTGGCACATCCACCTGCAATAAAGCTGGCGACAAAGTGAGTGAAGATCCGAGAACAGTCTCCTaGGACCCTCTTCACGAGCTA +
Preference number: 4 (lower is better)
Translates to: QERGTSTCNKAGDKVSEDPRTVS*DPLHEL
Trigger: TAGCTCGTGAAGAGGGTCTCAGGAGACTGTTCTCGG...ATCTTCACTCACTTTGTCGCCAGCTTTATTGCAGGTGGATGTGCCACGTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS CCA 90 bp CCCACGAAGCCTCCAGCGCTGACGGAGCCCAGCAACACCTTCTCGTaGAAGGGGAGAGGCCCCTGGCTGCCCTTGGCCACACGGTCCCGC +
Preference number: 5 (lower is better)
Translates to: PTKPPALTEPSNTFS*KGRGPWLPLATRSR
Trigger: GCGGGACCGTGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCTGGGCTCCGTCAGCGCTGGAGGCTTCGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571876.1
CDS-3UTR CAA 90 bp CCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGGGTCTCGCGGGGAGTaGCAGCTGCCCGAGGACATG +
Preference number: 5 (lower is better)
Translates to: PTQLRGLAGSCSCPRTWKGSRGE*QLPEDM
Trigger: CATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCC...CTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp CCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGCAGATGCACCTaGAGCAGGTCCAGCGGGTGC +
Preference number: 5 (lower is better)
Translates to: PTQLRGLAGSCSCPRTWKVCRCT*SRSSGC
Trigger: GCACCCGCTGGACCTGCTCAAGGTGCATCTGCAGAC...CTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp GGACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGGCCACTGGAAGATGCTGCTTaGGGCATCGGGGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: GLLVGEKALRRNRGPPGPLEDAA*GIGGRR
Trigger: CCTCCTGCCCCCGATGCCCAAAGCAGCATCTTCCAG...TGGCCCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp AGCCCAGCGACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGCTGGAAGATGCTGCTTaGGGCATCGGGGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: SPATREAEDAASAPSDSLLEDAA*GIGGRR
Trigger: CCTCCTGCCCCCGATGCCCAAAGCAGCATCTTCCAG...CAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGTCGCTGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS TCA 90 bp TTCAGCACATCCAGGGGCTGGCACAGGAACGTGGCACATCCACCCTaGGGAGGGGGCTCGTCACCAGCGGCCTGTCAGGTACGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: FSTSRGWHRNVAHPP*GGGSSPAACQVRQA
Trigger: TGCCTGGCGTACCTGACAGGCCGCTGGTGACGAGCCCCCTCCTCAGGGTGGATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570310.5
CDS-3UTR CAA 90 bp GAGAGCCTGGTAGCCAGAGCGGGGGTGGTGCAGCTACAGCTGAGAGGGGACGAGGTCTGCAGATGCACCTaGAGCAGGTCCAGCGGGTGC +
Preference number: 5 (lower is better)
Translates to: ESLVARAGVVQLQLRGDEVCRCT*SRSSGC
Trigger: GCACCCGCTGGACCTGCTCAAGGTGCATCTGCAGAC...CTCGTCCCCTCTCAGCTGTAGCTGCACCACCCCCGCTCTGGCTACCAGGCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR CAA 90 bp CCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGTTCTGCATCCTGACGTaGACCAAGTCTGCGGGCGTC +
Preference number: 5 (lower is better)
Translates to: PTQLRGLAGSCSCPRTWKFCILT*TKSAGV
Trigger: GACGCCCGCAGACTTGGTCAACGTCAGGATGCAGAA...CTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp TTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTGGGTCTCGCGGGGAGTaGCAGCTGCCCGAGGACATG +
Preference number: 5 (lower is better)
Translates to: LWSALLVHPTQLRGLAGSGSRGE*QLPEDM
Trigger: CATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCC...ACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp CCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCGGGTCTCGCGGGGAGTaGCAGCTGCCCGAGGACATG +
Preference number: 5 (lower is better)
Translates to: PWATPSQALACGLRCLFIGSRGE*QLPEDM
Trigger: CATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCC...GATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS CCA 90 bp TCATCAGGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGAACGTaGCACATCCACCCTGAGGAGGGGGCTCGTCACCAGCGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: SSGESSAHPGAGTGT*HIHPEEGARHQRPV
Trigger: GACAGGCCGCTGGTGACGAGCCCCCTCCTCAGGGTGGATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570310.5
CDS-3UTR CAA 90 bp ACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAGGCTGGATGCCATGGTaGCACCCGAGAACAGTCTCC +
Preference number: 5 (lower is better)
Translates to: TREAEDAASAPSDSLSGRGWMPW*HPRTVS
Trigger: GGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCC...TCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp AGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGGGCTGGATGCCATGGTaGCACCCGAGAACAGTCTCC +
Preference number: 5 (lower is better)
Translates to: REAEDAASAPSDSLSGRRGWMPW*HPRTVS
Trigger: GGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCC...CCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp AGCCCAGCGACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTGTGGTCTGCGTTGCTaGTTCATCCCACCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SPATREAEDAASAPSDSLCGLRC*FIPPSC
Trigger: GCAGCTGGGTGGGATGAACAAGCAACGCAGACCACA...CAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGTCGCTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp TCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAACGCTTGTGGTCTGCGTaGCTTGTTCATCCCACCCAG +
Preference number: 5 (lower is better)
Translates to: SHPAAGSRGELQLPEDMERLWSA*LVHPTQ
Trigger: CTGGGTGGGATGAACAAGCAACGCAGACCACAAGCG...TTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS CCA 90 bp TCATCAGGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGAACGTaGCACATCCACCCTGAGGAGGGGGCTCGTCACCAGCGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: SSGESSAHPGAGTGT*HIHPEEGARHQRLQ
Trigger: TTGCAGCCGCTGGTGACGAGCCCCCTCCTCAGGGTGGATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331531.9
CDS-3UTR CAA 90 bp ACTCCTTGTCGGGGAGAAGGCCCTAAGGAGGAACCGCGGCCCGCCTGGGCCATTTTCTGCATCCTGACGTaGACCAAGTCTGCGGGCGTC +
Preference number: 5 (lower is better)
Translates to: TPCRGEGPKEEPRPAWAIFCILT*TKSAGV
Trigger: GACGCCCGCAGACTTGGTCAACGTCAGGATGCAGAA...AATGGCCCAGGCGGGCCGCGGTTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS TCA 90 bp TTCAGCACATCCAGGGGCTGGCACAGGAACGTGGCACATCCACCCTaGGGAGGGGGCTCGTCACCAGCGGCTGCAATAAAGCTGGCGACA +
Preference number: 5 (lower is better)
Translates to: FSTSRGWHRNVAHPP*GGGSSPAAAIKLAT
Trigger: TGTCGCCAGCTTTATTGCAGCCGCTGGTGACGAGCCCCCTCCTCAGGGTGGATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331531.9
CDS-3UTR CAA 90 bp GTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGGGCTGGATGCCATGGTaGCACCCGAGAACAGTCTCC +
Preference number: 5 (lower is better)
Translates to: VSRGVAAARGHGRSGCSQGWMPW*HPRTVS
Trigger: GGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCC...CTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp GTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGTGTGGTCTGCGTTGCTaGTTCATCCCACCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VCVACSSHPAAGSRGELQCGLRC*FIPPSC
Trigger: GCAGCTGGGTGGGATGAACAAGCAACGCAGACCACA...CTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp CCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGCGCTTGTGGTCTGCGTaGCTTGTTCATCCCACCCAG +
Preference number: 5 (lower is better)
Translates to: PRHSLVVCVACSSHPAAGRLWSA*LVHPTQ
Trigger: CTGGGTGGGATGAACAAGCAACGCAGACCACAAGCG...CCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp GCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCAGCTCCCGGCATTTATaGATTGCAGCCCCCACAGAG +
Preference number: 5 (lower is better)
Translates to: ALLVHPTQLRGLAGSCSCSSRHL*IAAPTE
Trigger: CTCTGTGGGGGCTGCAATCAATAAATGCCGGGAGCT...GCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp CGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCAGCTCCCGGCATTTATaGATTGCAGCCCCCACAGAG +
Preference number: 5 (lower is better)
Translates to: RCLFIPPSCGVSRGVAAASSRHL*IAAPTE
Trigger: CTCTGTGGGGGCTGCAATCAATAAATGCCGGGAGCT...GGCAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp TTGGAGTTCATCAGGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGAACGTGCCCCTTGGCTGTCCCTaGAGCAGGTCCAGCGGGTGC +
Preference number: 5 (lower is better)
Translates to: LEFIRRVFSTSRGWHRNVPLGCP*SRSSGC
Trigger: GCACCCGCTGGACCTGCTCAAGGGACAGCCAAGGGG...CACGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGATGAACTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CAA 90 bp GGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGCCCAGCCATTCCCACGGCTGGATGCCATGGTaGCACCCGAGAACAGTCTCC +
Preference number: 5 (lower is better)
Translates to: GTLWKNLACLAWQPSHSHGWMPW*HPRTVS
Trigger: GGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCC...GTGGGAATGGCTGGGCTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000574129.5
CDS-3UTR CAA 90 bp GGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGAGCAGGTGCTGGGCTaGGGACTCTTTGGAAGAACC +
Preference number: 5 (lower is better)
Translates to: GLAGSCSCPRTWKVWLLSEQVLG*GLFGRT
Trigger: GGTTCTTCCAAAGAGTCCCAAGCCCAGCACCTGCTC...TGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp CGGCATTTATTGATTGCAGCCCCCACAGAGCACACTGCCCTTCCCAGGTGGGGTCTGGAAGATGCTGCTTaGGGCATCGGGGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: RHLLIAAPTEHTALPRWGLEDAA*GIGGRR
Trigger: CCTCCTGCCCCCGATGCCCAAAGCAGCATCTTCCAG...ACCCCACCTGGGAAGGGCAGTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp GTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGCGCTTGTGGTCTGCGTaGCTTGTTCATCCCACCCAG +
Preference number: 5 (lower is better)
Translates to: VSRGVAAARGHGRSGCSQRLWSA*LVHPTQ
Trigger: CTGGGTGGGATGAACAAGCAACGCAGACCACAAGCG...CTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp AGCCCAGCGACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGGGTCAGGATGGCACTTaGATGCCAAAGTTTTTGCGT +
Preference number: 5 (lower is better)
Translates to: SPATREAEDAASAPSDSLGQDGT*MPKFLR
Trigger: ACGCAAAAACTTTGGCATCAAAGTGCCATCCTGACC...CAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGTCGCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp TGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGCTGTGGGCTTGGGACTCTTaGGAAGAACCTAGCGTGTCT +
Preference number: 5 (lower is better)
Translates to: CVACSSHPAAGSRGELQLWAWDS*EEPSVS
Trigger: AGACACGCTAGGTTCTTCCAAAGAGTCCCAAGCCCA...CAGCTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp GTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGACATGGAAGGTCTGGTaGCTCTCAGCAGACACGAAG +
Preference number: 5 (lower is better)
Translates to: VCVACSSHPAAGSRGELQTWKVW*LSADTK
Trigger: CTTCGTGTCTGCTGAGAGCAACCAGACCTTCCATGT...CTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp ACCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATTGTGGTCTGCGTTGCTaGTTCATCCCACCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: TLGHSLPGTRLWSALLVHCGLRC*FIPPSC
Trigger: GCAGCTGGGTGGGATGAACAAGCAACGCAGACCACA...ATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp AGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCTCCCAGGCACTCGCTaGTGGTCTGCGTTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: RHSLVVCVACSSHPAAGSLPGTR*WSALLV
Trigger: AACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAG...AGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp CCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCACTCCCAGGCACTCGCTaGTGGTCTGCGTTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: PLPPRHSLVVCVACSSHPLPGTR*WSALLV
Trigger: AACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAG...TGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp ACCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCTCCCAGGCACTCGCTaGTGGTCTGCGTTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: TLGHSLPGTRLWSALLVHLPGTR*WSALLV
Trigger: AACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAG...ATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS TCA 90 bp GCACAGGAACGTGGCACATCCACCTGCAATAAAGCTGGCCCACAGTaGCTAAGGCCCCTCGGCTGGATGCCATGGTTGCACCCGAGAACA +
Preference number: 5 (lower is better)
Translates to: AQERGTSTCNKAGPQ*LRPLGWMPWLHPRT
Trigger: TGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGGGCCTTAGTCACTGTGGGCCAGCTTTATTGCAGGTGGATGTGCCACGTTCCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545862.5
CDS CCA 90 bp TCCCCCTTGGAGTTCATCAGGCGAGTCTTCAGCACATCCAGGGGCTaGCACAGGAACGTGGCACATCCACCTGCAATAAAGCTGGCCCAC +
Preference number: 5 (lower is better)
Translates to: SPLEFIRRVFSTSRG*HRNVAHPPAIKLAH
Trigger: GTGGGCCAGCTTTATTGCAGGTGGATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGATGAACTCCAAGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545862.5
CDS-3UTR CAA 90 bp GGAGAGGCTTTGGCAAAACTAACTGTTAAAGCCACTGCAGGGCAGGCAGCGGTGGTCTGCAGATGCACCTaGAGCAGGTCCAGCGGGTGC +
Preference number: 5 (lower is better)
Translates to: GEALAKLTVKATAGQAAVVCRCT*SRSSGC
Trigger: GCACCCGCTGGACCTGCTCAAGGTGCATCTGCAGAC...CACCGCTGCCTGCCCTGCAGTGGCTTTAACAGTTAGTTTTGCCAAAGCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp CGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTGCTCTCAGCAGATGGGCTTGGGACTCTTaGGAAGAACCTAGCGTGTCT +
Preference number: 5 (lower is better)
Translates to: RGELQLPEDMEGLVALSRWAWDS*EEPSVS
Trigger: AGACACGCTAGGTTCTTCCAAAGAGTCCCAAGCCCA...TCTGCTGAGAGCAACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp AGCCAGGCTGCACCCACACTCTGCCACCCAAGTCCTCGATGGAAAGTGCTGGAAGAGCAGGTGCTGGGCTaGGGACTCTTTGGAAGAACC +
Preference number: 5 (lower is better)
Translates to: SQAAPTLCHPSPRWKVLEEQVLG*GLFGRT
Trigger: GGTTCTTCCAAAGAGTCCCAAGCCCAGCACCTGCTC...TTCCAGCACTTTCCATCGAGGACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR CAA 90 bp AGCAACACCTTCTCGTGGAAGGGGAGAGGCCCCTGGCTGCCCTTGGCCACACGGCAGCGACCAGCATTGTaGCTCATTAGTAAAGCCAGT +
Preference number: 5 (lower is better)
Translates to: SNTFSWKGRGPWLPLATRQRPAL*LISKAS
Trigger: ACTGGCTTTACTAATGAGCAACAATGCTGGTCGCTG...CCGTGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS TCA 90 bp GGAGGGGGCTCGTCACCAGCGGCTGCAATAAAGCTGGCGACAAAGTaGGTGAAGATGTTGTCAGAGAGGTACCCGGTGCTAAGGACCAGC +
Preference number: 5 (lower is better)
Translates to: GGGSSPAAAIKLATK*VKMLSERYPVLRTS
Trigger: GCTGGTCCTTAGCACCGGGTACCTCTCTGACAACATCTTCACTCACTTTGTCGCCAGCTTTATTGCAGCCGCTGGTGACGAGCCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331531.9
CDS-3UTR CAA 90 bp AGCCCAGCGACCAGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTTGATGCCAAAGTTTTaGCGTAGCTGTTCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: SPATREAEDAASAPSDSLLMPKF*RSCSRN
Trigger: GTTTCTGGAACAGCTACGCAAAAACTTTGGCATCAA...CAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCTGGTCGCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp ACCCTGGGCCACTCCCTCCCAGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATTGGGCTTGGGACTCTTaGGAAGAACCTAGCGTGTCT +
Preference number: 5 (lower is better)
Translates to: TLGHSLPGTRLWSALLVHWAWDS*EEPSVS
Trigger: AGACACGCTAGGTTCTTCCAAAGAGTCCCAAGCCCA...ATGAACAAGCAACGCAGACCACAAGCGAGTGCCTGGGAGGGAGTGGCCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp TCCCCCTTGGAGTTCATCAGGCGAGTCTTCAGCACATCCAGGGGCTGGCACAGGTGGGCTTGGGACTCTTaGGAAGAACCTAGCGTGTCT +
Preference number: 5 (lower is better)
Translates to: SPLEFIRRVFSTSRGWHRWAWDS*EEPSVS
Trigger: AGACACGCTAGGTTCTTCCAAAGAGTCCCAAGCCCA...CCTGTGCCAGCCCCTGGATGTGCTGAAGACTCGCCTGATGAACTCCAAGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CAA 90 bp TGTGGCAGCTCCCGGCATTTATTGATTGCAGCCCCCACAGAGCACACTGCCCTTGAGCAGGTGCTGGGCTaGGGACTCTTTGGAAGAACC +
Preference number: 5 (lower is better)
Translates to: CGSSRHLLIAAPTEHTALEQVLG*GLFGRT
Trigger: GGTTCTTCCAAAGAGTCCCAAGCCCAGCACCTGCTC...AAGGGCAGTGTGCTCTGTGGGGGCTGCAATCAATAAATGCCGGGAGCTGCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545862.5
CDS-3UTR CAA 90 bp GCTAGCACTTGGGTGAGCAACAGCCAGGCTGCACCCACACTCTGCCACCCAAGTACATGGAAGGTCTGGTaGCTCTCAGCAGACACGAAG +
Preference number: 5 (lower is better)
Translates to: ASTWVSNSQAAPTLCHPSTWKVW*LSADTK
Trigger: CTTCGTGTCTGCTGAGAGCAACCAGACCTTCCATGT...ACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCTGTTGCTCACCCAAGTGCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR CAA 90 bp GCAGGTGCTGGGCTTGGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGACATGGAAGGTCTGGTaGCTCTCAGCAGACACGAAG +
Preference number: 5 (lower is better)
Translates to: AGAGLGTLWKNLACLAWQTWKVW*LSADTK
Trigger: CTTCGTGTCTGCTGAGAGCAACCAGACCTTCCATGT...CTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCCAAGCCCAGCACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR CAA 90 bp CCAAGTCCTCGATGGAAAGTGCTGGAAGATGCTGCTTTGGGCATCGGGGGCAGGAGCTCCCGGCATTTATaGATTGCAGCCCCCACAGAG +
Preference number: 5 (lower is better)
Translates to: PSPRWKVLEDAALGIGGRSSRHL*IAAPTE
Trigger: CTCTGTGGGGGCTGCAATCAATAAATGCCGGGAGCT...CCTGCCCCCGATGCCCAAAGCAGCATCTTCCAGCACTTTCCATCGAGGACTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR CAA 90 bp GCTGCGGGGTCTCGCGGGGAGTTGCAGCTGCCCGAGGACATGGAAGGTCTGGTTTTGATGCCAAAGTTTTaGCGTAGCTGTTCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: AAGSRGELQLPEDMEGLVLMPKF*RSCSRN
Trigger: GTTTCTGGAACAGCTACGCAAAAACTTTGGCATCAA...AACCAGACCTTCCATGTCCTCGGGCAGCTGCAACTCCCCGCGAGACCCCGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp CCCGAGCTTCGCTGTCTCCACGGCGCAGTGGAAAACGCCCTGATACTCCCCCTTGGTCAGGATGGCACTTaGATGCCAAAGTTTTTGCGT +
Preference number: 5 (lower is better)
Translates to: PELRCLHGAVENALILPLGQDGT*MPKFLR
Trigger: ACGCAAAAACTTTGGCATCAAAGTGCCATCCTGACC...AAGGGGGAGTATCAGGGCGTTTTCCACTGCGCCGTGGAGACAGCGAAGCTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CAA 90 bp AGGGAGGCAGAGGATGCAGCATCCGCCCCGTCGGACTCCTTGTCGGGGAGAAGGGTGAGTGGAGAGGCTTaGGCAAAACTAACTGTTAAA +
Preference number: 5 (lower is better)
Translates to: REAEDAASAPSDSLSGRRVSGEA*AKLTVK
Trigger: TTTAACAGTTAGTTTTGCCAAAGCCTCTCCACTCAC...CCTTCTCCCCGACAAGGAGTCCGACGGGGCGGATGCTGCATCCTCTGCCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp CCCTCGGCTGGATGCCATGGTTGCACCCGAGAACAGTCTCCTGAGACCCTCTTCACGCAGCGACCAGCATaGTTGCTCATTAGTAAAGCC +
Preference number: 5 (lower is better)
Translates to: PSAGCHGCTREQSPETLFTQRPA*LLISKA
Trigger: GGCTTTACTAATGAGCAACAATGCTGGTCGCTGCGT...GAAGAGGGTCTCAGGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS-3UTR CAA 90 bp GTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTCGCGGGGAGTTGCAGTTGATGCCAAAGTTTTaGCGTAGCTGTTCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: VCVACSSHPAAGSRGELQLMPKF*RSCSRN
Trigger: GTTTCTGGAACAGCTACGCAAAAACTTTGGCATCAA...CTGCAACTCCCCGCGAGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp AGGCACTCGCTTGTGGTCTGCGTTGCTTGTTCATCCCACCCAGCTGCGGGGTCTGGTCAGGATGGCACTTaGATGCCAAAGTTTTTGCGT +
Preference number: 5 (lower is better)
Translates to: RHSLVVCVACSSHPAAGSGQDGT*MPKFLR
Trigger: ACGCAAAAACTTTGGCATCAAAGTGCCATCCTGACC...AGACCCCGCAGCTGGGTGGGATGAACAAGCAACGCAGACCACAAGCGAGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp CAGGAACGTGGCACATCCACCTGCAATAAAGCTGGCGACAAAGTGAGTGAAGATGGCTGGATGCCATGGTaGCACCCGAGAACAGTCTCC +
Preference number: 5 (lower is better)
Translates to: QERGTSTCNKAGDKVSEDGWMPW*HPRTVS
Trigger: GGAGACTGTTCTCGGGTGCAACCATGGCATCCAGCC...ATCTTCACTCACTTTGTCGCCAGCTTTATTGCAGGTGGATGTGCCACGTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574129.5
ENST00000574884.5
CDS TCA 90 bp GTGCCAGAACCTCCACCTGACTCTGCAATAAAGCTGGCGACAAAGTaGGTGAAGATGTTGTCAGAGAGGTACCCGGTGCTAAGGACCAGC +
Preference number: 5 (lower is better)
Translates to: VPEPPPDSAIKLATK*VKMLSERYPVLRTS
Trigger: GCTGGTCCTTAGCACCGGGTACCTCTCTGACAACATCTTCACTCACTTTGTCGCCAGCTTTATTGCAGAGTCAGGTGGAGGTTCTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570310.5
CDS-3UTR CAA 90 bp GAGGCTTTGGCAAAACTAACTGTTAAAGCCACTGCAGGGCAGGCAGCGGTGCGCGGTCAGGATGGCACTTaGATGCCAAAGTTTTTGCGT +
Preference number: 5 (lower is better)
Translates to: EALAKLTVKATAGQAAVRGQDGT*MPKFLR
Trigger: ACGCAAAAACTTTGGCATCAAAGTGCCATCCTGACC...GCGCACCGCTGCCTGCCCTGCAGTGGCTTTAACAGTTAGTTTTGCCAAAGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS-3UTR CAA 90 bp TGGGCTTGGGACTCTTTGGAAGAACCTAGCGTGTCTGGCCTGGCAGCCCAGCCAGTGAGTGGAGAGGCTTaGGCAAAACTAACTGTTAAA +
Preference number: 5 (lower is better)
Translates to: WAWDSLEEPSVSGLAAQPVSGEA*AKLTVK
Trigger: TTTAACAGTTAGTTTTGCCAAAGCCTCTCCACTCAC...TGGCTGGGCTGCCAGGCCAGACACGCTAGGTTCTTCCAAAGAGTCCCAAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR CAA 90 bp AGCAACAGCCAGGCTGCACCCACACTCTGCCACCCAAGTCCTCGATGGAAAGTGGTGAGTGGAGAGGCTTaGGCAAAACTAACTGTTAAA +
Preference number: 5 (lower is better)
Translates to: SNSQAAPTLCHPSPRWKVVSGEA*AKLTVK
Trigger: TTTAACAGTTAGTTTTGCCAAAGCCTCTCCACTCAC...CACTTTCCATCGAGGACTTGGGTGGCAGAGTGTGGGTGCAGCCTGGCTGTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331531.9
ENST00000350690.10
CDS-3UTR CAA 90 bp AGGGCCTGCTGGGCAGACTGTGCAAAGCCTCAGGCCCTTTCTTCTTTGTTCTCTTTGATGCCAAAGTTTTaGCGTAGCTGTTCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: RACWADCAKPQALSSLFSLMPKF*RSCSRN
Trigger: GTTTCTGGAACAGCTACGCAAAAACTTTGGCATCAA...AGAGAACAAAGAAGAAAGGGCCTGAGGCTTTGCACAGTCTGCCCAGCAGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS GCA 72 bp ACGCCCCTTGGCTGTCCCTTGAGCAGGTCCAGCGGGTaGGTGCAGCAGGCGGCCCCGCAGGAGGCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: TPLGCPLSRSSG*VQQAAPQEASP
Trigger: GGGGCTGGCCTCCTGCGGGGCCGCCTGCTGCACGCACCCGCTGGACCTGCTCAAGGGACAGCCAAGGGGCGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574129.5
CDS GCA 72 bp TGCGTCTGCAGATGCACCTTGAGCAGGTCCAGCGGGTaGGTGCAGCAGGCGGCCCCGCAGGAGGCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: CVCRCTLSRSSG*VQQAAPQEASP
Trigger: GGGGCTGGCCTCCTGCGGGGCCGCCTGCTGCACGCACCCGCTGGACCTGCTCAAGGTGCATCTGCAGACGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS CCA 72 bp CGAAGTACCAGCGCGACACGCGCGCCTCGGCTGCCATaGCCCAGGAGAGCCCAATCCCGGCCCGACCACAAC +
Preference number: 6 (lower is better)
Translates to: RSTSATRAPRLP*PRRAQSRPDHN
Trigger: GTTGTGGTCGGGCCGGGATTGGGCTCTCCTGGGCCATGGCAGCCGAGGCGCGCGTGTCGCGCTGGTACTTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
ENST00000574129.5
CDS CCA 72 bp CCTCCAGCGCTGACGGAGCCCAGCAACACCTTCTCGTaGAAGGGGAGAGGCCCCTGGCTGCCCTTGGCCACA +
Preference number: 6 (lower is better)
Translates to: PPALTEPSNTFS*KGRGPWLPLAT
Trigger: TGTGGCCAAGGGCAGCCAGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCTGGGCTCCGTCAGCGCTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571876.1
CDS TCA 72 bp TCCAGGGGCTGGCACAGGAACGTGGCACATCCACCCTaGGGAGGGGGCTCGTCACCAGCGGCCTGTCAGGTA +
Preference number: 6 (lower is better)
Translates to: SRGWHRNVAHPP*GGGSSPAACQV
Trigger: TACCTGACAGGCCGCTGGTGACGAGCCCCCTCCTCAGGGTGGATGTGCCACGTTCCTGTGCCAGCCCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570310.5
CDS GCA 72 bp AGCGCCATGCCCGTCATGCGCAGCTTCACCTCCTGCTaGGTCTGCAGATGCACCTTGAGCAGGTCCAGCGGG +
Preference number: 6 (lower is better)
Translates to: SAMPVMRSFTSC*VCRCTLSRSSG
Trigger: CCCGCTGGACCTGCTCAAGGTGCATCTGCAGACGCAGCAGGAGGTGAAGCTGCGCATGACGGGCATGGCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS GCA 72 bp CGCAGCGCCATGCCCGTCATGCGCAGCTTCACCTCCTaGTGCGTCTGCAGATGCACCTTGAGCAGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: RSAMPVMRSFTS*CVCRCTLSRSS
Trigger: GCTGGACCTGCTCAAGGTGCATCTGCAGACGCAGCAGGAGGTGAAGCTGCGCATGACGGGCATGGCGCTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331531.9
ENST00000350690.10
ENST00000545862.5
CDS TCA 72 bp TCCAGGGGCTGGCACAGGAACGTGGCACATCCACCCTaGGGAGGGGGCTCGTCACCAGCGGCTGCAATAAAG +
Preference number: 6 (lower is better)
Translates to: SRGWHRNVAHPP*GGGSSPAAAIK
Trigger: CTTTATTGCAGCCGCTGGTGACGAGCCCCCTCCTCAGGGTGGATGTGCCACGTTCCTGTGCCAGCCCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331531.9
CDS TCA 72 bp CGTGGCACATCCACCTGCAATAAAGCTGGCCCACAGTaGCTAAGGCCCCTCGGCTGGATGCCATGGTTGCAC +
Preference number: 6 (lower is better)
Translates to: RGTSTCNKAGPQ*LRPLGWMPWLH
Trigger: GTGCAACCATGGCATCCAGCCGAGGGGCCTTAGTCACTGTGGGCCAGCTTTATTGCAGGTGGATGTGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545862.5