RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC24A4 (Homo sapiens)

Ensembl gene IDs: ENSG00000140090

Ensembl transcript IDs: ENST00000393265.6, ENST00000525557.5, ENST00000526482.1, ENST00000531433.5, ENST00000532405.6, ENST00000554461.5, ENST00000554925.5, ENST00000556739.5, ENST00000676001.1

Found 1066 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCCTGCTGGCGGCTGCTGGGCAGGAGACACAGGCAGAGGCGCCCTaGCAGGGAGTGTGTGCTCTGAAATGGAGACTCAGCCTCACAGAC +
Preference number: 1 (lower is better)
Translates to: SLLAAAGQETQAEAP*QGVCALKWRLSLTD
Trigger: GTCTGTGAGGCTGAGTCTCCATTTCAGAGCACACACTCCCTGGCAGGGCGCCTCTGCCTGTGTCTCCTGCCCAGCAGCCGCCAGCAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR GCA 90 bp GCTCTCTTTGTGCTCAGACACCAGCAACTATTCCCTGCTGGCGGCTaGTGGGCAGGAGACACAGGCAGAGGCGCCCTGCCAGGGAGTGTG +
Preference number: 1 (lower is better)
Translates to: ALFVLRHQQLFPAGG*WAGDTGRGALPGSV
Trigger: CACACTCCCTGGCAGGGCGCCTCTGCCTGTGTCTCCTGCCCAGCAGCCGCCAGCAGGGAATAGTTGCTGGTGTCTGAGCACAAAGAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 90 bp CAGCCTCACAGACCAGCAACCCCCACTGTGGAGCTCCCCAAGAGTTaGCCACAGTGGCTCAGCCACAGTTCTGTCCGCAGGGTCTCCAGG +
Preference number: 1 (lower is better)
Translates to: QPHRPATPTVELPKS*PQWLSHSSVRRVSR
Trigger: CCTGGAGACCCTGCGGACAGAACTGTGGCTGAGCCACTGTGGCCAACTCTTGGGGAGCTCCACAGTGGGGGTTGCTGGTCTGTGAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 90 bp CTCTTTGTGCTCAGACACCAGCAACTATTCCCTGCTGGCGGCTGCTaGGCAGGAGACACAGGCAGAGGCGCCCTGCCAGGGAGTGTGTGC +
Preference number: 1 (lower is better)
Translates to: LFVLRHQQLFPAGGC*AGDTGRGALPGSVC
Trigger: GCACACACTCCCTGGCAGGGCGCCTCTGCCTGTGTCTCCTGCCCAGCAGCCGCCAGCAGGGAATAGTTGCTGGTGTCTGAGCACAAAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR TCA 90 bp GGCAGGAGACACAGGCAGAGGCGCCCTGCCAGGGAGTGTGTGCTCTaGAATGGAGACTCAGCCTCACAGACCAGCAACCCCCACTGTGGA +
Preference number: 1 (lower is better)
Translates to: GRRHRQRRPARECVL*NGDSASQTSNPHCG
Trigger: TCCACAGTGGGGGTTGCTGGTCTGTGAGGCTGAGTCTCCATTTCAGAGCACACACTCCCTGGCAGGGCGCCTCTGCCTGTGTCTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR GCA 90 bp TGCTGGGCAGGAGACACAGGCAGAGGCGCCCTGCCAGGGAGTGTGTaGTCTGAAATGGAGACTCAGCCTCACAGACCAGCAACCCCCACT +
Preference number: 1 (lower is better)
Translates to: CWAGDTGRGALPGSV*SEMETQPHRPATPT
Trigger: AGTGGGGGTTGCTGGTCTGTGAGGCTGAGTCTCCATTTCAGAGCACACACTCCCTGGCAGGGCGCCTCTGCCTGTGTCTCCTGCCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 90 bp CTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTaGCCTGTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTG +
Preference number: 1 (lower is better)
Translates to: LAGAELQGGGGCPAA*PVARQRPRWLFLPV
Trigger: CACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCACAGGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR CCA 90 bp GAGACACAGGCAGAGGCGCCCTGCCAGGGAGTGTGTGCTCTGAAATaGAGACTCAGCCTCACAGACCAGCAACCCCCACTGTGGAGCTCC +
Preference number: 1 (lower is better)
Translates to: ETQAEAPCQGVCALK*RLSLTDQQPPLWSS
Trigger: GGAGCTCCACAGTGGGGGTTGCTGGTCTGTGAGGCTGAGTCTCCATTTCAGAGCACACACTCCCTGGCAGGGCGCCTCTGCCTGTGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 90 bp GCAGGTGGAAGAAACCTGGACCTTGGGCCGCCCAGGAACGGCCTTTaGTCAGGGTCTGTAGGACTGCCCTTGGGTGATAGACACACCCCA +
Preference number: 1 (lower is better)
Translates to: AGGRNLDLGPPRNGL*SGSVGLPLGDRHTP
Trigger: TGGGGTGTGTCTATCACCCAAGGGCAGTCCTACAGACCCTGACCAAAGGCCGTTCCTGGGCGGCCCAAGGTCCAGGTTTCTTCCACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR GCA 90 bp GGTAATCAAAGCTCTCTTTGTGCTCAGACACCAGCAACTATTCCCTaGTGGCGGCTGCTGGGCAGGAGACACAGGCAGAGGCGCCCTGCC +
Preference number: 1 (lower is better)
Translates to: GNQSSLCAQTPATIP*WRLLGRRHRQRRPA
Trigger: GGCAGGGCGCCTCTGCCTGTGTCTCCTGCCCAGCAGCCGCCAGCAGGGAATAGTTGCTGGTGTCTGAGCACAAAGAGAGCTTTGATTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 90 bp GTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTaGCCTGGGAGGGGTGATGGACTGGTGCTTGGCCTCCCTTCTGCT +
Preference number: 1 (lower is better)
Translates to: VIPTLTPQVWPTYRG*PGRGDGLVLGLPSA
Trigger: AGCAGAAGGGAGGCCAAGCACCAGTCCATCACCCCTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CCA 90 bp AGAGGCATGGAGGCCAGCAGACTGTGGGTAACAGGAAGGATGGGGTaGGTAAGGCGAGGACTGTGTCCTGCCCACGGTGCCCTTAATCAC +
Preference number: 1 (lower is better)
Translates to: RGMEASRLWVTGRMG*VRRGLCPAHGALNH
Trigger: GTGATTAAGGGCACCGTGGGCAGGACACAGTCCTCGCCTTACCCACCCCATCCTTCCTGTTACCCACAGTCTGCTGGCCTCCATGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 90 bp AATCAAAGCTCTCTTTGTGCTCAGACACCAGCAACTATTCCCTGCTaGCGGCTGCTGGGCAGGAGACACAGGCAGAGGCGCCCTGCCAGG +
Preference number: 1 (lower is better)
Translates to: NQSSLCAQTPATIPC*RLLGRRHRQRRPAR
Trigger: CCTGGCAGGGCGCCTCTGCCTGTGTCTCCTGCCCAGCAGCCGCCAGCAGGGAATAGTTGCTGGTGTCTGAGCACAAAGAGAGCTTTGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR GCA 90 bp GAGGGGCTCACAGGATCAGCTACAGAGACCAGGAAATCCTTCGGGTaGACACACATAAAGAGAGCAAGCGCAGCGCTTCAGGCCCGGGGT +
Preference number: 1 (lower is better)
Translates to: EGLTGSATETRKSFG*THIKRASAALQARG
Trigger: ACCCCGGGCCTGAAGCGCTGCGCTTGCTCTCTTTATGTGTGTGCACCCGAAGGATTTCCTGGTCTCTGTAGCTGATCCTGTGAGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 90 bp GCTCTGAAATGGAGACTCAGCCTCACAGACCAGCAACCCCCACTGTaGAGCTCCCCAAGAGTTGGCCACAGTGGCTCAGCCACAGTTCTG +
Preference number: 1 (lower is better)
Translates to: ALKWRLSLTDQQPPL*SSPRVGHSGSATVL
Trigger: CAGAACTGTGGCTGAGCCACTGTGGCCAACTCTTGGGGAGCTCCACAGTGGGGGTTGCTGGTCTGTGAGGCTGAGTCTCCATTTCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 90 bp ACCAACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTaGCCAACTTACAGAGGCTGGCCTGGGAGGGGTGATGGACTGGTG +
Preference number: 1 (lower is better)
Translates to: TNQEGKVIPTLTPQV*PTYRGWPGRGDGLV
Trigger: CACCAGTCCATCACCCCTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CCA 90 bp GAGACACAAGTGACAAGGGGAAGAGGCATGGAGGCCAGCAGACTGTaGGTAACAGGAAGGATGGGGTGGGTAAGGCGAGGACTGTGTCCT +
Preference number: 1 (lower is better)
Translates to: ETQVTRGRGMEASRL*VTGRMGWVRRGLCP
Trigger: AGGACACAGTCCTCGCCTTACCCACCCCATCCTTCCTGTTACCCACAGTCTGCTGGCCTCCATGCCTCTTCCCCTTGTCACTTGTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR TCA 90 bp GCCTGTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTaGAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTG +
Preference number: 1 (lower is better)
Translates to: ACGQTKTTMALPSSV*KNGQWLPMQERPVV
Trigger: CACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR GCA 90 bp TGCCCTTGGGTGATAGACACACCCCACCTGGTCAGGGAAGCTTGGTaGATTATCAGCTGCTTAGGTCTGTTAAGGCAGGGGACCGACAGG +
Preference number: 1 (lower is better)
Translates to: CPWVIDTPHLVREAW*IISCLGLLRQGTDR
Trigger: CCTGTCGGTCCCCTGCCTTAACAGACCTAAGCAGCTGATAATGCACCAAGCTTCCCTGACCAGGTGGGGTGTGTCTATCACCCAAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR GCA 90 bp CTTGGCTTTCCCACAGGCACTCTGTGGATTTTCAGCTCTCAGAGATaGCACCCGTGGCCCTCAAATCCTGGTACCAGGGTATCCCAGCAG +
Preference number: 1 (lower is better)
Translates to: LGFPTGTLWIFSSQR*HPWPSNPGTRVSQQ
Trigger: CTGCTGGGATACCCTGGTACCAGGATTTGAGGGCCACGGGTGGCATCTCTGAGAGCTGAAAATCCACAGAGTGCCTGTGGGAAAGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 90 bp GACTGCCCTTGGGTGATAGACACACCCCACCTGGTCAGGGAAGCTTaGTGCATTATCAGCTGCTTAGGTCTGTTAAGGCAGGGGACCGAC +
Preference number: 1 (lower is better)
Translates to: DCPWVIDTPHLVREA*CIISCLGLLRQGTD
Trigger: GTCGGTCCCCTGCCTTAACAGACCTAAGCAGCTGATAATGCACCAAGCTTCCCTGACCAGGTGGGGTGTGTCTATCACCCAAGGGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 90 bp CCCACAGGCACTCTGTGGATTTTCAGCTCTCAGAGATGCCACCCGTaGCCCTCAAATCCTGGTACCAGGGTATCCCAGCAGCAGACATGT +
Preference number: 1 (lower is better)
Translates to: PTGTLWIFSSQRCHP*PSNPGTRVSQQQTC
Trigger: ACATGTCTGCTGCTGGGATACCCTGGTACCAGGATTTGAGGGCCACGGGTGGCATCTCTGAGAGCTGAAAATCCACAGAGTGCCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 90 bp GAAAAGCCACACAGCCAAGGGCTTGGCTTTCCCACAGGCACTCTGTaGATTTTCAGCTCTCAGAGATGCCACCCGTGGCCCTCAAATCCT +
Preference number: 1 (lower is better)
Translates to: EKPHSQGLGFPTGTL*IFSSQRCHPWPSNP
Trigger: AGGATTTGAGGGCCACGGGTGGCATCTCTGAGAGCTGAAAATCCACAGAGTGCCTGTGGGAAAGCCAAGCCCTTGGCTGTGTGGCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR GCA 90 bp GAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTaGCCCTTCCAAACTGTGGCTGCTTCCAGCAAAAGTCAGAGGCTC +
Preference number: 1 (lower is better)
Translates to: ECLPSWALNPNRLRS*PFQTVAASSKSQRL
Trigger: GAGCCTCTGACTTTTGCTGGAAGCAGCCACAGTTTGGAAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR CCA 90 bp GCAGCTGACCCAGAACCTTCCTCCAGGGCCAGGTTTTCAAGATACTaGACACCTTCCACCCTAACCACGCTTGACCTGGTGAGGCAAAAT +
Preference number: 1 (lower is better)
Translates to: AADPEPSSRARFSRY*TPSTLTTLDLVRQN
Trigger: ATTTTGCCTCACCAGGTCAAGCGTGGTTAGGGTGGAAGGTGTCCAGTATCTTGAAAACCTGGCCCTGGAGGAAGGTTCTGGGTCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR TCA 90 bp TCCCAGGAGCACATGCTGCCTAAGGAACCACCTCTGGGCTGGAGGTaGCACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATGAGA +
Preference number: 1 (lower is better)
Translates to: SQEHMLPKEPPLGWR*HLRTTFLFCTCPMR
Trigger: TCTCATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGTGGTTCCTTAGGCAGCATGTGCTCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR TCA 90 bp AGGACCCATTCACCCAGGGCAGAAAGGTCTCTGCTTCTCAACTGCTaGATCCCAGGGGGAAAGTTCCAAAGTGTGGTAACAGAACCTTCC +
Preference number: 1 (lower is better)
Translates to: RTHSPRAERSLLLNC*IPGGKFQSVVTEPS
Trigger: GGAAGGTTCTGTTACCACACTTTGGAACTTTCCCCCTGGGATTCAGCAGTTGAGAAGCAGAGACCTTTCTGCCCTGGGTGAATGGGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR TCA 90 bp GGCCAGGTTTTCAAGATACTGGACACCTTCCACCCTAACCACGCTTaGCCTGGTGAGGCAAAATTCCAAACCAGAAGTCCACAGGAACCA +
Preference number: 1 (lower is better)
Translates to: GQVFKILDTFHPNHA*PGEAKFQTRSPQEP
Trigger: TGGTTCCTGTGGACTTCTGGTTTGGAATTTTGCCTCACCAGGTCAAGCGTGGTTAGGGTGGAAGGTGTCCAGTATCTTGAAAACCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR TCA 90 bp GCAACAGGGAACTTCAGGGACACAAGCACGAACACTTCCTCCTTTTaGAACTCAGGAGGCCCTAAAGGGCACAGTCAGAAATTCCAACCA +
Preference number: 1 (lower is better)
Translates to: ATGNFRDTSTNTSSF*NSGGPKGHSQKFQP
Trigger: TGGTTGGAATTTCTGACTGTGCCCTTTAGGGCCTCCTGAGTTTCAAAAGGAGGAAGTGTTCGTGCTTGTGTCCCTGAAGTTCCCTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CCA 90 bp AGACCTGTAAATCCAAGGGATAGAAAAGCCACACAGCCAAGGGCTTaGCTTTCCCACAGGCACTCTGTGGATTTTCAGCTCTCAGAGATG +
Preference number: 1 (lower is better)
Translates to: RPVNPRDRKATQPRA*LSHRHSVDFQLSEM
Trigger: CATCTCTGAGAGCTGAAAATCCACAGAGTGCCTGTGGGAAAGCCAAGCCCTTGGCTGTGTGGCTTTTCTATCCCTTGGATTTACAGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR TCA 90 bp AGCTGCCTGCAGAACAGAAAGACAAACTGCATGCAGAAGTCCTTCTaGCTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTCCGT +
Preference number: 1 (lower is better)
Translates to: SCLQNRKTNCMQKSF*LKCAGEMRCLAHLR
Trigger: ACGGAGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGCATGCAGTTTGTCTTTCTGTTCTGCAGGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR GCA 90 bp GAACAGAAAGACAAACTGCATGCAGAAGTCCTTCTGACTAAAGTGTaGAGGAGAGATGAGATGCTTGGCACATCTCCGTGGTTGGCAGCT +
Preference number: 1 (lower is better)
Translates to: EQKDKLHAEVLLTKV*RRDEMLGTSPWLAA
Trigger: AGCTGCCAACCACGGAGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGCATGCAGTTTGTCTTTCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR CCA 90 bp CGCGTCTGTCCTGAATGGACTTGGGAAATTCTGTGTAGAGAATTCTaGAGTGACAGCAAAGAAGGCTCTGTTGTTTGGGACATTCCCTTT +
Preference number: 1 (lower is better)
Translates to: RVCPEWTWEILCREF*SDSKEGSVVWDIPF
Trigger: AAAGGGAATGTCCCAAACAACAGAGCCTTCTTTGCTGTCACTCCAGAATTCTCTACACAGAATTTCCCAAGTCCATTCAGGACAGACGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 90 bp TCTTCTTCCATTGAAAGAGGACTGCGCGTCTGTCCTGAATGGACTTaGGAAATTCTGTGTAGAGAATTCTGGAGTGACAGCAAAGAAGGC +
Preference number: 1 (lower is better)
Translates to: SSSIERGLRVCPEWT*EILCREFWSDSKEG
Trigger: GCCTTCTTTGCTGTCACTCCAGAATTCTCTACACAGAATTTCCCAAGTCCATTCAGGACAGACGCGCAGTCCTCTTTCAATGGAAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 90 bp GTCCTCTCTTCTTCCATTGAAAGAGGACTGCGCGTCTGTCCTGAATaGACTTGGGAAATTCTGTGTAGAGAATTCTGGAGTGACAGCAAA +
Preference number: 1 (lower is better)
Translates to: VLSSSIERGLRVCPE*TWEILCREFWSDSK
Trigger: TTTGCTGTCACTCCAGAATTCTCTACACAGAATTTCCCAAGTCCATTCAGGACAGACGCGCAGTCCTCTTTCAATGGAAGAAGAGAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR TCA 90 bp AGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATaGGCCTGTAAGATCGGAGGAACCAGGAGAACTTGGCTATTAAGG +
Preference number: 1 (lower is better)
Translates to: SLENQNRDRSTLEPG*ACKIGGTRRTWLLR
Trigger: CCTTAATAGCCAAGTTCTCCTGGTTCCTCCGATCTTACAGGCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CCA 90 bp CTGTGTAGAGAATTCTGGAGTGACAGCAAAGAAGGCTCTGTTGTTTaGGACATTCCCTTTAGGCACAAAGGTAGATCACACCAAACCATG +
Preference number: 1 (lower is better)
Translates to: LCREFWSDSKEGSVV*DIPFRHKGRSHQTM
Trigger: CATGGTTTGGTGTGATCTACCTTTGTGCCTAAAGGGAATGTCCCAAACAACAGAGCCTTCTTTGCTGTCACTCCAGAATTCTCTACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR TCA 90 bp TTGTTGTTTTTCAGGCAATCTCTTCTCGTCATTAACCAGCACTTCTaGCACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCA +
Preference number: 1 (lower is better)
Translates to: LLFFRQSLLVINQHF*HTQFSSAGYEICWA
Trigger: TGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAATGACGAGAAGAGATTGCCTGAAAAACAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR TCA 90 bp AACTTTCAACAGGGTGGTTTTGAAACTAGAGCATTAACCAATAAATaGCAAACCCACAAGGACAGTGCATTGTGTCACATAGAAGATCTG +
Preference number: 1 (lower is better)
Translates to: NFQQGGFETRALTNK*QTHKDSALCHIEDL
Trigger: CAGATCTTCTATGTGACACAATGCACTGTCCTTGTGGGTTTGTCATTTATTGGTTAATGCTCTAGTTTCAAAACCACCCTGTTGAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CCA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTaGAACTTTCAACAGGGTGGTTTTGAAACTAGAGCATTAACCAAT +
Preference number: 1 (lower is better)
Translates to: SSVQQAMKFVGHINN*NFQQGGFETRALTN
Trigger: ATTGGTTAATGCTCTAGTTTCAAAACCACCCTGTTGAAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCCCCCAAATCCAGCCTTaGAGGGGCGGAACTCCAAGG +
Preference number: 2 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLAPQIQP*RGGTPR
Trigger: CCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTGGGG...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR CAA 90 bp GGGCCGCCCAGGAACGGCCTTTGGTCAGGGTCTGTAGGACTGCCCTaGGGTGATAGACACACCCCACCTGGTCAGGGAAGCTTGGTGCAT +
Preference number: 2 (lower is better)
Translates to: GPPRNGLWSGSVGLP*GDRHTPPGQGSLVH
Trigger: ATGCACCAAGCTTCCCTGACCAGGTGGGGTGTGTCTATCACCCAAGGGCAGTCCTACAGACCCTGACCAAAGGCCGTTCCTGGGCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CAA 90 bp TCAGCCTCACAGACCAGCAACCCCCACTGTGGAGCTCCCCAAGAGTaGGCCACAGTGGCTCAGCCACAGTTCTGTCCGCAGGGTCTCCAG +
Preference number: 2 (lower is better)
Translates to: SASQTSNPHCGAPQE*ATVAQPQFCPQGLQ
Trigger: CTGGAGACCCTGCGGACAGAACTGTGGCTGAGCCACTGTGGCCAACTCTTGGGGAGCTCCACAGTGGGGGTTGCTGGTCTGTGAGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR TCA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTTCCTTCCAGTGTGTaGAAGAACGGACAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSLPSSV*KNGQWL
Trigger: CAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAG...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR-3UTR GCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGCCCCAAATCCAGCCTTaGAGGGGCGGAACTCCAAGG +
Preference number: 2 (lower is better)
Translates to: QCVKERTVAAYAGETCGGPQIQP*RGGTPR
Trigger: CCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTGGGG...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR-3UTR CCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGGGATGCCCAGCAGCCTaGCCTGTGGCCAGACAAAGA +
Preference number: 2 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGGCPAA*PVARQR
Trigger: TCTTTGTCTGGCCACAGGCCAGGCTGCTGGGCATCC...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR-3UTR TCA 90 bp ACCAGCAACCCCCACTGTGGAGCTCCCCAAGAGTTGGCCACAGTGGCTCAGCCAAGGATACGTGTGCTCTaGAAGCTACACAAGGCTTCA +
Preference number: 2 (lower is better)
Translates to: TSNPHCGAPQELATVAQPRIRVL*KLHKAS
Trigger: TGAAGCCTTGTGTAGCTTTCAGAGCACACGTATCCT...TGGCTGAGCCACTGTGGCCAACTCTTGGGGAGCTCCACAGTGGGGGTTGCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR CCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGCAGCAGCCTGGCCTGTaGCCAGACAAAGACCACGAT +
Preference number: 2 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGQQPGL*PDKDHD
Trigger: ATCGTGGTCTTTGTCTGGCCACAGGCCAGGCTGCTG...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR-3UTR CCA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGGAATGTCTGCCATCATaGGCCCTAAACCCCAACAGG +
Preference number: 2 (lower is better)
Translates to: HTHTHSPSVANLQRLAWEECLPS*ALNPNR
Trigger: CCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTC...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp ACCAGCAACCCCCACTGTGGAGCTCCCCAAGAGTTGGCCACAGTGGCTCAGCCACTGGTCAGGGAAGCTTaGTGCATTATCAGCTGCTTA +
Preference number: 2 (lower is better)
Translates to: TSNPHCGAPQELATVAQPLVREA*CIISCL
Trigger: TAAGCAGCTGATAATGCACCAAGCTTCCCTGACCAG...TGGCTGAGCCACTGTGGCCAACTCTTGGGGAGCTCCACAGTGGGGGTTGCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CAA 90 bp GAGGACTGTGTCCTGCCCACGGTGCCCTTAATCACCAGTCTCTCATaGCAGCTGACCCAGAACCTTCCTCCAGGGCCAGGTTTTCAAGAT +
Preference number: 2 (lower is better)
Translates to: EDCVLPTVPLITSLS*QLTQNLPPGPGFQD
Trigger: ATCTTGAAAACCTGGCCCTGGAGGAAGGTTCTGGGTCAGCTGCAATGAGAGACTGGTGATTAAGGGCACCGTGGGCAGGACACAGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR TCA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCGCCTGGTGGTGGGGGTaGGGTCCTGTCGCAGGCTCA +
Preference number: 2 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSAWWWG*GPVAGS
Trigger: TGAGCCTGCGACAGGACCTCACCCCCACCACCAGGC...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp AGAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTGCCCCTTGACAGTGGCTGCCTATaGAGGAGAGACCTGTGGTGG +
Preference number: 2 (lower is better)
Translates to: RMSAIMGPKPQQVEVLPLDSGCL*RRDLWW
Trigger: CCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTC...AAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR-3UTR GCA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGAATCTACAGGGGCCCTaGCTTCCCTCTTTGCTGATT +
Preference number: 2 (lower is better)
Translates to: HTHTHSPSVANLQRLAWENLQGP*LPSLLI
Trigger: AATCAGCAAAGAGGGAAGGCAGGGCCCCTGTAGATT...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACGGATGCCCAGCAGCCTaGCCTGTGGCCAGACAAAGA +
Preference number: 2 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYGCPAA*PVARQR
Trigger: TCTTTGTCTGGCCACAGGCCAGGCTGCTGGGCATCC...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CAA 90 bp AAGAATTTTATTGGCCTGGCCCGTGGACAAGTCCCAACCAACATGTaGCATAAGAAGCAACTGCTTGGCGGGGCGCGGTGGCTCACGCTT +
Preference number: 2 (lower is better)
Translates to: KNFIGLARGQVPTNM*HKKQLLGGARWLTL
Trigger: AAGCGTGAGCCACCGCGCCCCGCCAAGCAGTTGCTTCTTATGCAACATGTTGGTTGGGACTTGTCCACGGGCCAGGCCAATAAAATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR TCA 90 bp AAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTCTTCCTTCCAGTGTGTaGAAGAACGGACAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: KVIPTLTPQVWPTYRGWPLPSSV*KNGQWL
Trigger: CAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAG...AGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR TCA 90 bp CCTGGAAAGATAGCTCCACCCTGGTTGCAGAACAGGAGGGAAAAGCCTCTTCTCCTTCCTTCCAGTGTGTaGAAGAACGGACAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: PGKIAPPWLQNRREKPLLLPSSV*KNGQWL
Trigger: CAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAG...GAGAAGAGGCTTTTCCCTCCTGTTCTGCAACCAGGGTGGAGCTATCTTTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR TCA 90 bp AAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTCAGCTCAGGGGTCTTTaGAGCTGCTCAGATAATGGC +
Preference number: 2 (lower is better)
Translates to: KVIPTLTPQVWPTYRGWPQLRGL*SCSDNG
Trigger: GCCATTATCTGAGCAGCTTCAAAGACCCCTGAGCTG...AGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR TCA 90 bp AGAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTGCCCCTTAGTGTGCAGGAGAGATaGGATGCTTGGCACATCTCC +
Preference number: 2 (lower is better)
Translates to: RMSAIMGPKPQQVEVLPLSVQER*DAWHIS
Trigger: GGAGATGTGCCAAGCATCTCATCTCTCCTGCACACT...AAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR-3UTR GCA 90 bp GTCCTGCCCACGGTGCCCTTAATCACCAGTCTCTCATTGCAGCTGACCCAGAACACACCTCAGTGCCAATaGAAGATGGCATACAGAGGA +
Preference number: 2 (lower is better)
Translates to: VLPTVPLITSLSLQLTQNTPQCQ*KMAYRG
Trigger: TCCTCTGTATGCCATCTTGCATTGGCACTGAGGTGT...GTTCTGGGTCAGCTGCAATGAGAGACTGGTGATTAAGGGCACCGTGGGCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR CCA 90 bp AGCCTCGTGCGGGAAGCTCAAGGAAGCAGACAGTGTGGTCATGGGGTCTGCAGCAGTGCCAATGCAAGATaGCATACAGAGGATTTGTGT +
Preference number: 2 (lower is better)
Translates to: SLVREAQGSRQCGHGVCSSANAR*HTEDLC
Trigger: ACACAAATCCTCTGTATGCCATCTTGCATTGGCACT...GCTGCAGACCCCATGACCACACTGTCTGCTTCCTTGAGCTTCCCGCACGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR CCA 90 bp AAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTTCAGCCTCCCATTCTTaGCCTGCCACGTGTAGAAAC +
Preference number: 2 (lower is better)
Translates to: KVIPTLTPQVWPTYRGWPSASHS*PATCRN
Trigger: GTTTCTACACGTGGCAGGCCAAGAATGGGAGGCTGA...AGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CAA 90 bp AGTCCGGGTTCTCTGAGAGATGGGCTCCTGCTGATGCAATTAGGCTaGCAAATCCCCATAAACAGGGAAGAGCAGGTGGAAGAAACCTGG +
Preference number: 2 (lower is better)
Translates to: SPGSLRDGLLLMQLG*QIPINREEQVEETW
Trigger: CCAGGTTTCTTCCACCTGCTCTTCCCTGTTTATGGGGATTTGCAAGCCTAATTGCATCAGCAGGAGCCCATCTCTCAGAGAACCCGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR TCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGTGTGCAGGAGAGATaGGATGCTTGGCACATCTCC +
Preference number: 2 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYSVQER*DAWHIS
Trigger: GGAGATGTGCCAAGCATCTCATCTCTCCTGCACACT...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR TCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCCCTCTGGGCTGGAGGTaGCACTTGAGAACAACATTC +
Preference number: 2 (lower is better)
Translates to: TSGLEVTLENNIPILHLPPLGWR*HLRTTF
Trigger: GAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGG...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR-3UTR TCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACCCCTCGTCCTCAAGTTaGAGACCACTGAGCCCAATT +
Preference number: 2 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYPSSSS*RPLSPI
Trigger: AATTGGGCTCAGTGGTCTTCAACTTGAGGACGAGGG...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTGACAGTGGCTGCCTATaGAGGAGAGACCTGTGGTGG +
Preference number: 2 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSDSGCL*RRDLWW
Trigger: CCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTC...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR-3UTR GCA 90 bp AGCCTCGTGCGGGAAGCTCAAGGAAGCAGACAGTGTGGTCATGGGGTCTGCAGCCCCTATGAGATCTTGTaGTCACAAATGACCTCAATT +
Preference number: 2 (lower is better)
Translates to: SLVREAQGSRQCGHGVCSPYEIL*SQMTSI
Trigger: AATTGAGGTCATTTGTGAGCACAAGATCTCATAGGG...GCTGCAGACCCCATGACCACACTGTCTGCTTCCTTGAGCTTCCCGCACGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR CCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGCTTGGCACATCTCCGTaGTTGGCAGCTCAGGGGTCT +
Preference number: 2 (lower is better)
Translates to: EIPTSVTIFESQEGISYWLGTSP*LAAQGS
Trigger: AGACCCCTGAGCTGCCAACCACGGAGATGTGCCAAG...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp AGCCTCGTGCGGGAAGCTCAAGGAAGCAGACAGTGTGGTCATGGGGTCTGCAGCCCTCTTACATCATCATaGGTAGTTCCCATACATTCA +
Preference number: 2 (lower is better)
Translates to: SLVREAQGSRQCGHGVCSPLTSS*VVPIHS
Trigger: TGAATGTATGGGAACTACCCATGATGATGTAAGAGG...GCTGCAGACCCCATGACCACACTGTCTGCTTCCTTGAGCTTCCCGCACGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR GCA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGACAACATTCCTATTTTaGACCTGCCCTATGAGATCT +
Preference number: 2 (lower is better)
Translates to: HTHTHSPSVANLQRLAWETTFLF*TCPMRS
Trigger: AGATCTCATAGGGCAGGTGCAAAATAGGAATGTTGT...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCGCTCCCAGGAGCACATaGTGCCTAAGGAACCACCTC +
Preference number: 2 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSAPRST*CLRNHL
Trigger: GAGGTGGTTCCTTAGGCAGCATGTGCTCCTGGGAGC...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCACTTGTTTAGGTGGATaGCGAGGACATTCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGTCLGG*RGHSSL
Trigger: CAGGGAGGAATGTCCTCGGCATCCACCTAAACAAGT...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525557.5
3UTR-3UTR GCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATGACAGTGGCTGCCTATaGAGGAGAGACCTGTGGTGG +
Preference number: 2 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHDSGCL*RRDLWW
Trigger: CCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTC...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp TACCTTTTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACCCCAAATCCAGCCTTaGAGGGGCGGAACTCCAAGG +
Preference number: 2 (lower is better)
Translates to: YLFPYSKPNTSVPMQDGIPQIQP*RGGTPR
Trigger: CCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTGGGG...TATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAAAAGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATGCAGGAGAGATGAGATaGTTGGCACATCTCCGTGGT +
Preference number: 2 (lower is better)
Translates to: SGLEVTLENNIPILHLPYAGEMR*LAHLRG
Trigger: ACCACGGAGATGTGCCAAGCATCTCATCTCTCCTGC...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR-3UTR GCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACACACCTCAGTGCCAATaGAAGATGGCATACAGAGGA +
Preference number: 2 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYTPQCQ*KMAYRG
Trigger: TCCTCTGTATGCCATCTTGCATTGGCACTGAGGTGT...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATCAGCAGCCTGGCCTGTaGCCAGACAAAGACCACGAT +
Preference number: 2 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHQQPGL*PDKDHD
Trigger: ATCGTGGTCTTTGTCTGGCCACAGGCCAGGCTGCTG...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATCTTGGCACATCTCCGTaGTTGGCAGCTCAGGGGTCT +
Preference number: 2 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHLGTSP*LAAQGS
Trigger: AGACCCCTGAGCTGCCAACCACGGAGATGTGCCAAG...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGGCCCCTTCCAAACTGTaGCTGCTTCCAGCAAAAGTC +
Preference number: 2 (lower is better)
Translates to: EIPTSVTIFESQEGISYWAPSKL*LLPAKV
Trigger: GACTTTTGCTGGAAGCAGCCACAGTTTGGAAGGGGC...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTCGCCACTTGTTTAGGTaGATGCCGAGGACATTCCTC +
Preference number: 2 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSRHLFR*MPRTFL
Trigger: GAGGAATGTCCTCGGCATCCACCTAAACAAGTGGCG...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525557.5
3UTR-3UTR TCA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCAGTGTGCAGGAGAGATaGGATGCTTGGCACATCTCC +
Preference number: 2 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSSVQER*DAWHIS
Trigger: GGAGATGTGCCAAGCATCTCATCTCTCCTGCACACT...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp GTCTCTGAGTTAGCACCTTTCCACGTTAGTCTCTTACCTTTTTCCCTATTCCAAGCTCCCAGGAGCACATaGTGCCTAAGGAACCACCTC +
Preference number: 2 (lower is better)
Translates to: VSELAPFHVSLLPFSLFQAPRST*CLRNHL
Trigger: GAGGTGGTTCCTTAGGCAGCATGTGCTCCTGGGAGC...TTGGAATAGGGAAAAAGGTAAGAGACTAACGTGGAAAGGTGCTAACTCAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCGCCCCTTCCAAACTGTaGCTGCTTCCAGCAAAAGTC +
Preference number: 2 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSAPSKL*LLPAKV
Trigger: GACTTTTGCTGGAAGCAGCCACAGTTTGGAAGGGGC...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CAA 90 bp GGCCCTAAAGGGCACAGTCAGAAATTCCAACCAGCGTCACGATCTTaGAGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCACC +
Preference number: 2 (lower is better)
Translates to: GPKGHSQKFQPASRS*SLRKGLATGFKLIT
Trigger: GGTGATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTCTGACTGTGCCCTTTAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR TCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATCCTCTGGGCTGGAGGTaGCACTTGAGAACAACATTC +
Preference number: 2 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHPLGWR*HLRTTF
Trigger: GAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGG...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR TCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACACAAAAAGAGAAGCCTaGACTTGGTGTAGCTACGAT +
Preference number: 2 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYTKREA*TWCSYD
Trigger: ATCGTAGCTACACCAAGTTCAGGCTTCTCTTTTTGT...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR TCA 90 bp CCTGGAAAGATAGCTCCACCCTGGTTGCAGAACAGGAGGGAAAAGCCTCTTCTCTTGTTCCCATATAACTaGCACAGTGGGGAAGATTTT +
Preference number: 2 (lower is better)
Translates to: PGKIAPPWLQNRREKPLLLFPYN*HSGEDF
Trigger: AAAATCTTCCCCACTGTGTCAGTTATATGGGAACAA...GAGAAGAGGCTTTTCCCTCCTGTTCTGCAACCAGGGTGGAGCTATCTTTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR GCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTTCCTATTTTGCACCTaGCCTATGAGATCTTGTGCT +
Preference number: 2 (lower is better)
Translates to: TSGLEVTLENNIPILHLPFLFCT*PMRSCA
Trigger: AGCACAAGATCTCATAGGGCAGGTGCAAAATAGGAA...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR-3UTR GCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGAACAGGTTGAGGTCTTaGCCCTTCCAAACTGTGGCT +
Preference number: 2 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRNRLRS*PFQTVA
Trigger: AGCCACAGTTTGGAAGGGGCAAGACCTCAACCTGTT...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATGCCCCTTCCAAACTGTaGCTGCTTCCAGCAAAAGTC +
Preference number: 2 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHAPSKL*LLPAKV
Trigger: GACTTTTGCTGGAAGCAGCCACAGTTTGGAAGGGGC...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp AAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGCATATAAATAACTaGAACTTTCAACAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: KVIPTLTPQVWPTYRGWPGHINN*NFQQGG
Trigger: ACCACCCTGTTGAAAGTTCCAGTTATTTATATGCCC...AGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp AAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTCCTCTTACATCATCATaGGTAGTTCCCATACATTCA +
Preference number: 2 (lower is better)
Translates to: KVIPTLTPQVWPTYRGWPPLTSS*VVPIHS
Trigger: TGAATGTATGGGAACTACCCATGATGATGTAAGAGG...AGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CAA 90 bp ACCACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTaGCACCTGCCCTATGAGATCTTGTGCTCACAAATGACCTCAATT +
Preference number: 2 (lower is better)
Translates to: TTSGLEVTLENNIPI*HLPYEILCSQMTSI
Trigger: AATTGAGGTCATTTGTGAGCACAAGATCTCATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR-3UTR TCA 90 bp GTCTCTGAGTTAGCACCTTTCCACGTTAGTCTCTTACCTTTTTCCCTATTCCAACCTCTGGGCTGGAGGTaGCACTTGAGAACAACATTC +
Preference number: 2 (lower is better)
Translates to: VSELAPFHVSLLPFSLFQPLGWR*HLRTTF
Trigger: GAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGG...TTGGAATAGGGAAAAAGGTAAGAGACTAACGTGGAAAGGTGCTAACTCAGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACGACAGTGGCTGCCTATaGAGGAGAGACCTGTGGTGG +
Preference number: 2 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNDSGCL*RRDLWW
Trigger: CCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTC...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp GTCTCTGAGTTAGCACCTTTCCACGTTAGTCTCTTACCTTTTTCCCTATTCCAAGCAGGAGAGATGAGATaGTTGGCACATCTCCGTGGT +
Preference number: 2 (lower is better)
Translates to: VSELAPFHVSLLPFSLFQAGEMR*LAHLRG
Trigger: ACCACGGAGATGTGCCAAGCATCTCATCTCTCCTGC...TTGGAATAGGGAAAAAGGTAAGAGACTAACGTGGAAAGGTGCTAACTCAGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp AGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGGCTCCCAGGAGCACATaGTGCCTAAGGAACCACCTC +
Preference number: 2 (lower is better)
Translates to: SLRKGLATGFKLITKFKVAPRST*CLRNHL
Trigger: GAGGTGGTTCCTTAGGCAGCATGTGCTCCTGGGAGC...CACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCAGACAAAGACCACGATaGCTCTTCCTTCCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSRQRPR*LFLPVC
Trigger: ACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACGGGCATATAAATAACTaGAACTTTCAACAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYGHINN*NFQQGG
Trigger: ACCACCCTGTTGAAAGTTCCAGTTATTTATATGCCC...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CAA 90 bp TTCACTCTAACAGGTAAGTTCTTTGTTTATTTGAGCCACACGCATTaGCTGAGAGTGGATCACAGGGACAGCACAGCCACCTTTTTCCAG +
Preference number: 2 (lower is better)
Translates to: FTLTGKFFVYLSHTH*LRVDHRDSTATFFQ
Trigger: CTGGAAAAAGGTGGCTGTGCTGTCCCTGTGATCCACTCTCAGCAAATGCGTGTGGCTCAAATAAACAAAGAACTTACCTGTTAGAGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR TCA 90 bp CCTCTTACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCACTTCCTTCCAGTGTGTaGAAGAACGGACAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: PLTSSWVVPIHSSVQNISLPSSV*KNGQWL
Trigger: CAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAG...TGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGTAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR TCA 90 bp CCTCTTACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAAGTGTGCAGGAGAGATaGGATGCTTGGCACATCTCC +
Preference number: 2 (lower is better)
Translates to: PLTSSWVVPIHSSVQNISSVQER*DAWHIS
Trigger: GGAGATGTGCCAAGCATCTCATCTCTCCTGCACACT...TGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGTAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR TCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGTTTGCACCTGCCCTATaGGATCTTGTGCTCACAAAT +
Preference number: 2 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRFAPAL*DLVLTN
Trigger: ATTTGTGAGCACAAGATCTCATAGGGCAGGTGCAAA...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACAGAACGGACAGTGGCTaGCTATGCAGGAGAGACCTG +
Preference number: 2 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNRTDSG*LCRRDL
Trigger: CAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCT...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp GTCTCTGAGTTAGCACCTTTCCACGTTAGTCTCTTACCTTTTTCCCTATTCCAAAACAGGTTGAGGTCTTaGCCCTTCCAAACTGTGGCT +
Preference number: 2 (lower is better)
Translates to: VSELAPFHVSLLPFSLFQNRLRS*PFQTVA
Trigger: AGCCACAGTTTGGAAGGGGCAAGACCTCAACCTGTT...TTGGAATAGGGAAAAAGGTAAGAGACTAACGTGGAAAGGTGCTAACTCAGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp ATATTTTTCTATCTAGTTTTGAGTCAGCCTCCCATTCTTGGCCTGCCACGTGTAAACAGGTTGAGGTCTTaGCCCTTCCAAACTGTGGCT +
Preference number: 2 (lower is better)
Translates to: IFFYLVLSQPPILGLPRVNRLRS*PFQTVA
Trigger: AGCCACAGTTTGGAAGGGGCAAGACCTCAACCTGTT...TACACGTGGCAGGCCAAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGAACCAAACACCTCAGTaGCAATGCAAGATGGCATAC +
Preference number: 2 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRNQTPQ*QCKMAY
Trigger: GTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTT...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp GCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCAGACAAAGACCACGATaGCTCTTCCTTCCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: ASRSLSLRKGLATGFKLIRQRPR*LFLPVC
Trigger: ACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT...GATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CAA 90 bp ACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATGAGATCTaGTGCTCACAAATGACCTCAATTCTGAAGCTGCCTGCAGAACAG +
Preference number: 2 (lower is better)
Translates to: TLENNIPILHLPYEI*CSQMTSILKLPAEQ
Trigger: CTGTTCTGCAGGCAGCTTCAGAATTGAGGTCATTTGTGAGCACAAGATCTCATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR-3UTR TCA 90 bp ATATTTTTCTATCTAGTTTTGAGTCAGCCTCCCATTCTTGGCCTGCCACGTGTAATGCAGAAGTCCTTCTaGCTAAAGTGTGCAGGAGAG +
Preference number: 2 (lower is better)
Translates to: IFFYLVLSQPPILGLPRVMQKSF*LKCAGE
Trigger: CTCTCCTGCACACTTTAGTCAGAAGGACTTCTGCAT...TACACGTGGCAGGCCAAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR TCA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACCCTCTGGGCTGGAGGTaGCACTTGAGAACAACATTC +
Preference number: 2 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNPLGWR*HLRTTF
Trigger: GAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGG...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR TCA 90 bp CACAAAACTAGTGTCCCGATTGAGTTTTCTTTATCAACAAGCAAACACAGCAACCCTCTGGGCTGGAGGTaGCACTTGAGAACAACATTC +
Preference number: 2 (lower is better)
Translates to: HKTSVPIEFSLSTSKHSNPLGWR*HLRTTF
Trigger: GAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGG...GTTGCTGTGTTTGCTTGTTGATAAAGAAAACTCAATCGGGACACTAGTTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR GCA 90 bp AGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGGCAGGAGAGATGAGATaGTTGGCACATCTCCGTGGT +
Preference number: 2 (lower is better)
Translates to: SLRKGLATGFKLITKFKVAGEMR*LAHLRG
Trigger: ACCACGGAGATGTGCCAAGCATCTCATCTCTCCTGC...CACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGTCTGATTTTCACACTTaGCTTCAGCTAACCAGAAAG +
Preference number: 2 (lower is better)
Translates to: EIPTSVTIFESQEGISYWSDFHT*LQLTRK
Trigger: CTTTCTGGTTAGCTGAAGGCAAGTGTGAAAATCAGA...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR TCA 90 bp TACCTTTTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATATTTGCACCTGCCCTATaGGATCTTGTGCTCACAAAT +
Preference number: 2 (lower is better)
Translates to: YLFPYSKPNTSVPMQDGIFAPAL*DLVLTN
Trigger: ATTTGTGAGCACAAGATCTCATAGGGCAGGTGCAAA...TATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAAAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CAA 90 bp AAATTCTGTGTAGAGAATTCTGGAGTGACAGCAAAGAAGGCTCTGTaGTTTGGGACATTCCCTTTAGGCACAAAGGTAGATCACACCAAA +
Preference number: 2 (lower is better)
Translates to: KFCVENSGVTAKKAL*FGTFPLGTKVDHTK
Trigger: TTTGGTGTGATCTACCTTTGTGCCTAAAGGGAATGTCCCAAACAACAGAGCCTTCTTTGCTGTCACTCCAGAATTCTCTACACAGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR TCA 90 bp GAGACTAAGAGTATTCATTTAGAATCTCAAATGGGTTCTGCTGAGGAAGAGGAGTTTGCACCTGCCCTATaGGATCTTGTGCTCACAAAT +
Preference number: 2 (lower is better)
Translates to: ETKSIHLESQMGSAEEEEFAPAL*DLVLTN
Trigger: ATTTGTGAGCACAAGATCTCATAGGGCAGGTGCAAA...CTCCTCTTCCTCAGCAGAACCCATTTGAGATTCTAAATGAATACTCTTAGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR TCA 90 bp CCTCTTACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAATAATCTCCAGTCTCTaGGTTAGCACCTTTCCACGT +
Preference number: 2 (lower is better)
Translates to: PLTSSWVVPIHSSVQNISIISSL*VSTFPR
Trigger: ACGTGGAAAGGTGCTAACTCAGAGACTGGAGATTAT...TGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGTAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATCCCTATGAGATCTTGTaGTCACAAATGACCTCAATT +
Preference number: 2 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHPYEIL*SQMTSI
Trigger: AATTGAGGTCATTTGTGAGCACAAGATCTCATAGGG...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGACACCTCAGTGCCAATaGAAGATGGCATACAGAGGA +
Preference number: 2 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQTPQCQ*KMAYRG
Trigger: TCCTCTGTATGCCATCTTGCATTGGCACTGAGGTGT...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTGAATGTCTGCCATCATaGGCCCTAAACCCCAACAGG +
Preference number: 2 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFECLPS*ALNPNR
Trigger: CCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTC...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp GCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCGGGCATATAAATAACTaGAACTTTCAACAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: ASRSLSLRKGLATGFKLIGHINN*NFQQGG
Trigger: ACCACCCTGTTGAAAGTTCCAGTTATTTATATGCCC...GATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR TCA 90 bp ACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAATATTCATGCAGAAGTCCTTCTaGCTAAAGTGTGCAGGAGAG +
Preference number: 2 (lower is better)
Translates to: TSSWVVPIHSSVQNISIFMQKSF*LKCAGE
Trigger: CTCTCCTGCACACTTTAGTCAGAAGGACTTCTGCAT...GAATATTGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp TTAACCAGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTTTCCTATTTTGCACCTaGCCTATGAGATCTTGTGCT +
Preference number: 2 (lower is better)
Translates to: LTSTSDTLSSVQQAMKFVFLFCT*PMRSCA
Trigger: AGCACAAGATCTCATAGGGCAGGTGCAAAATAGGAA...AACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CAA 90 bp AGCTATCAAGTGGTCGAAGATTATTTTATATTTTTCTATCTAGTTTaGAGTCAGCCTCCCATTCTTGGCCTGCCACGTGTAGAAACTACG +
Preference number: 2 (lower is better)
Translates to: SYQVVEDYFIFFYLV*SQPPILGLPRVETT
Trigger: CGTAGTTTCTACACGTGGCAGGCCAAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAATATAAAATAATCTTCGACCACTTGATAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR TCA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATGCTGGAGGTGACACTTaGGAACAACATTCCTATTTT +
Preference number: 2 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNAGGDT*EQHSYF
Trigger: AAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGC...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp GCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGATGTCTGGTGAATCACAAAACCAAACACCTCAGTaGCAATGCAAGATGGCATAC +
Preference number: 2 (lower is better)
Translates to: ATGFKLITKFKVMSGESQNQTPQ*QCKMAY
Trigger: GTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTT...TTGTGATTCACCAGACATCACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTAGACAAAGACCACGATaGCTCTTCCTTCCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFRQRPR*LFLPVC
Trigger: ACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTCGTGTAGAAACTACGTaGTTCCAGAAGCTTAGCTCT +
Preference number: 2 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFRVETT*FQKLSS
Trigger: AGAGCTAAGCTTCTGGAACCACGTAGTTTCTACACG...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp GAGACTAAGAGTATTCATTTAGAATCTCAAATGGGTTCTGCTGAGGAAGAGGAGCATCACAGAGCAGTTTaGAGAATCAAAACAGAGACA +
Preference number: 2 (lower is better)
Translates to: ETKSIHLESQMGSAEEEEHHRAV*RIKTET
Trigger: TGTCTCTGTTTTGATTCTCCAAACTGCTCTGTGATG...CTCCTCTTCCTCAGCAGAACCCATTTGAGATTCTAAATGAATACTCTTAGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR TCA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTTTTGCACCTGCCCTATaGGATCTTGTGCTCACAAAT +
Preference number: 2 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFFAPAL*DLVLTN
Trigger: ATTTGTGAGCACAAGATCTCATAGGGCAGGTGCAAA...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR TCA 90 bp ACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAATATTCATTAACCAGCACTTCTaGCACACTCAGTTCAGTTCA +
Preference number: 2 (lower is better)
Translates to: TSSWVVPIHSSVQNISIFINQHF*HTQFSS
Trigger: TGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAAT...GAATATTGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR TCA 90 bp GCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGATGTCTGGTGAATCACAAATTAACCAGCACTTCTaGCACACTCAGTTCAGTTCA +
Preference number: 2 (lower is better)
Translates to: ATGFKLITKFKVMSGESQINQHF*HTQFSS
Trigger: TGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAAT...TTGTGATTCACCAGACATCACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACCCCTATGAGATCTTGTaGTCACAAATGACCTCAATT +
Preference number: 2 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNPYEIL*SQMTSI
Trigger: AATTGAGGTCATTTGTGAGCACAAGATCTCATAGGG...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR GCA 90 bp GCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGATGTCTGGTGAATCACAAACAACATTCCTATTTTaGACCTGCCCTATGAGATCT +
Preference number: 2 (lower is better)
Translates to: ATGFKLITKFKVMSGESQTTFLF*TCPMRS
Trigger: AGATCTCATAGGGCAGGTGCAAAATAGGAATGTTGT...TTGTGATTCACCAGACATCACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CCA 90 bp GCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGATGTCTGGTGAATCACAACCTCTTACATCATCATaGGTAGTTCCCATACATTCA +
Preference number: 2 (lower is better)
Translates to: ATGFKLITKFKVMSGESQPLTSS*VVPIHS
Trigger: TGAATGTATGGGAACTACCCATGATGATGTAAGAGG...TTGTGATTCACCAGACATCACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CCA 72 bp CTCAGACACCAGCAACTATTCCCTGCTGGCGGCTGCTaGGCAGGAGACACAGGCAGAGGCGCCCTGCCAGGG +
Preference number: 3 (lower is better)
Translates to: LRHQQLFPAGGC*AGDTGRGALPG
Trigger: CCCTGGCAGGGCGCCTCTGCCTGTGTCTCCTGCCCAGCAGCCGCCAGCAGGGAATAGTTGCTGGTGTCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR GCA 72 bp GTGCTCAGACACCAGCAACTATTCCCTGCTGGCGGCTaGTGGGCAGGAGACACAGGCAGAGGCGCCCTGCCA +
Preference number: 3 (lower is better)
Translates to: VLRHQQLFPAGG*WAGDTGRGALP
Trigger: TGGCAGGGCGCCTCTGCCTGTGTCTCCTGCCCAGCAGCCGCCAGCAGGGAATAGTTGCTGGTGTCTGAGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR GCA 72 bp CCGCAGGGTCTCCAGGTCCCCCAGGTCCAAGCCTCGTaGGGGAAGCTCAAGGAAGCAGACAGTGTGGTCATG +
Preference number: 3 (lower is better)
Translates to: PQGLQVPQVQAS*GKLKEADSVVM
Trigger: CATGACCACACTGTCTGCTTCCTTGAGCTTCCCGCACGAGGCTTGGACCTGGGGGACCTGGAGACCCTGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 72 bp GAGGCCAGCAGACTGTGGGTAACAGGAAGGATGGGGTaGGTAAGGCGAGGACTGTGTCCTGCCCACGGTGCC +
Preference number: 3 (lower is better)
Translates to: EASRLWVTGRMG*VRRGLCPAHGA
Trigger: GGCACCGTGGGCAGGACACAGTCCTCGCCTTACCCACCCCATCCTTCCTGTTACCCACAGTCTGCTGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 72 bp GCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTaGCCTGTGGCCAGACAAAGACCACGATGGCTCTTC +
Preference number: 3 (lower is better)
Translates to: AELQGGGGCPAA*PVARQRPRWLF
Trigger: GAAGAGCCATCGTGGTCTTTGTCTGGCCACAGGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR CCA 72 bp CCATGGAGGGAAGGCACGGAAGGCAGCCTCAGCCGCTaGCGCTGGGATTCATTCGCTCTTGCTCTTTCCCAG +
Preference number: 3 (lower is better)
Translates to: PWREGTEGSLSR*RWDSFALALSQ
Trigger: CTGGGAAAGAGCAAGAGCGAATGAATCCCAGCGCCAGCGGCTGAGGCTGCCTTCCGTGCCTTCCCTCCATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 72 bp AGACCAGCAACCCCCACTGTGGAGCTCCCCAAGAGTTaGCCACAGTGGCTCAGCCACAGTTCTGTCCGCAGG +
Preference number: 3 (lower is better)
Translates to: RPATPTVELPKS*PQWLSHSSVRR
Trigger: CCTGCGGACAGAACTGTGGCTGAGCCACTGTGGCCAACTCTTGGGGAGCTCCACAGTGGGGGTTGCTGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 72 bp GCAGAGGCGCCCTGCCAGGGAGTGTGTGCTCTGAAATaGAGACTCAGCCTCACAGACCAGCAACCCCCACTG +
Preference number: 3 (lower is better)
Translates to: AEAPCQGVCALK*RLSLTDQQPPL
Trigger: CAGTGGGGGTTGCTGGTCTGTGAGGCTGAGTCTCCATTTCAGAGCACACACTCCCTGGCAGGGCGCCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR CAA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGCCCCCAAATCCAGCCTaGCAGGGGCGGAACTCCAAG +
Preference number: 3 (lower is better)
Translates to: HTHTHSPSVANLQRLAWEPPNPA*QGRNSK
Trigger: CTTGGAGTTCCGCCCCTGCAAGGCTGGATTTGGGGG...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR GCA 72 bp TTGGCCTGGCCCGTGGACAAGTCCCAACCAACATGTTaGATAAGAAGCAACTGCTTGGCGGGGCGCGGTGGC +
Preference number: 3 (lower is better)
Translates to: LAWPVDKSQPTC*IRSNCLAGRGG
Trigger: GCCACCGCGCCCCGCCAAGCAGTTGCTTCTTATGCAACATGTTGGTTGGGACTTGTCCACGGGCCAGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 72 bp ACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTaGCCTGGGAGGGGTGATGGACTGGTGCTTGGCCTC +
Preference number: 3 (lower is better)
Translates to: TLTPQVWPTYRG*PGRGDGLVLGL
Trigger: GAGGCCAAGCACCAGTCCATCACCCCTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CCA 72 bp AAGAGAGCAAGCGCAGCGCTTCAGGCCCGGGGTAGATaGGGGTTGATGGACTTACTGCCACCCAAGAGCTGC +
Preference number: 3 (lower is better)
Translates to: KRASAALQARGR*GLMDLLPPKSC
Trigger: GCAGCTCTTGGGTGGCAGTAAGTCCATCAACCCCCATCTACCCCGGGCCTGAAGCGCTGCGCTTGCTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR TCA 72 bp AGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGGGGTaGTGGACTGGTGCTTGGCCTCCCTTCTGCTATGAC +
Preference number: 3 (lower is better)
Translates to: SVANLQRLAWEG*WTGAWPPFCYD
Trigger: GTCATAGCAGAAGGGAGGCCAAGCACCAGTCCATCACCCCTCCCAGGCCAGCCTCTGTAAGTTGGCCACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CCA 72 bp GTGACAAGGGGAAGAGGCATGGAGGCCAGCAGACTGTaGGTAACAGGAAGGATGGGGTGGGTAAGGCGAGGA +
Preference number: 3 (lower is better)
Translates to: VTRGRGMEASRL*VTGRMGWVRRG
Trigger: TCCTCGCCTTACCCACCCCATCCTTCCTGTTACCCACAGTCTGCTGGCCTCCATGCCTCTTCCCCTTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 72 bp AGAAACCTGGACCTTGGGCCGCCCAGGAACGGCCTTTaGTCAGGGTCTGTAGGACTGCCCTTGGGTGATAGA +
Preference number: 3 (lower is better)
Translates to: RNLDLGPPRNGL*SGSVGLPLGDR
Trigger: TCTATCACCCAAGGGCAGTCCTACAGACCCTGACCAAAGGCCGTTCCTGGGCGGCCCAAGGTCCAGGTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 72 bp TTGAACCCAGGAGGTGGAGGTTGCAACCAGCCAACATaGCGCCACTGCACTGAGTCTAGGCGACAGAGCGAG +
Preference number: 3 (lower is better)
Translates to: LNPGGGGCNQPT*RHCTESRRQSE
Trigger: CTCGCTCTGTCGCCTAGACTCAGTGCAGTGGCGCCATGTTGGCTGGTTGCAACCTCCACCTCCTGGGTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 72 bp CACAGCCAAGGGCTTGGCTTTCCCACAGGCACTCTGTaGATTTTCAGCTCTCAGAGATGCCACCCGTGGCCC +
Preference number: 3 (lower is better)
Translates to: HSQGLGFPTGTL*IFSSQRCHPWP
Trigger: GGGCCACGGGTGGCATCTCTGAGAGCTGAAAATCCACAGAGTGCCTGTGGGAAAGCCAAGCCCTTGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR CAA 90 bp AGCCTCGTGCGGGAAGCTCAAGGAAGCAGACAGTGTGGTCATGGGGTCTGCAGCCAACAGGTTGAGGTCTaGCCCCTTCCAAACTGTGGC +
Preference number: 3 (lower is better)
Translates to: SLVREAQGSRQCGHGVCSQQVEV*PLPNCG
Trigger: GCCACAGTTTGGAAGGGGCAAGACCTCAACCTGTTG...GCTGCAGACCCCATGACCACACTGTCTGCTTCCTTGAGCTTCCCGCACGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR CAA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGGGAGAGATGAGATGCTaGGCACATCTCCGTGGTTGG +
Preference number: 3 (lower is better)
Translates to: HTHTHSPSVANLQRLAWEGEMRC*AHLRGW
Trigger: CCAACCACGGAGATGTGCCAAGCATCTCATCTCTCC...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CAA 90 bp AGAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTGCCCCTTCGGTCCAGTCGCCACTaGTTTAGGTGGATGCCGAGG +
Preference number: 3 (lower is better)
Translates to: RMSAIMGPKPQQVEVLPLRSSRH*FRWMPR
Trigger: CCTCGGCATCCACCTAAACAAGTGGCGACTGGACCG...AAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525557.5
3UTR TCA 72 bp GGGGTGATGGACTGGTGCTTGGCCTCCCTTCTGCTATaGCTGGCCATTGAACTAGAGACCCTTGACCTCTCC +
Preference number: 3 (lower is better)
Translates to: GVMDWCLASLLL*LAIELETLDLS
Trigger: GGAGAGGTCAAGGGTCTCTAGTTCAATGGCCAGTCATAGCAGAAGGGAGGCCAAGCACCAGTCCATCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR GCA 72 bp CTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTaGCTATGCAGGAGAGACCTGTGGTGGGGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: LFLPVCERTDSG*LCRRDLWWGKE
Trigger: CTCCTTCCCCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR GCA 72 bp CCCACAGGCACTCTGTGGATTTTCAGCTCTCAGAGATaGCACCCGTGGCCCTCAAATCCTGGTACCAGGGTA +
Preference number: 3 (lower is better)
Translates to: PTGTLWIFSSQR*HPWPSNPGTRV
Trigger: TACCCTGGTACCAGGATTTGAGGGCCACGGGTGGCATCTCTGAGAGCTGAAAATCCACAGAGTGCCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 72 bp GAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTaGCCAACTTACAGAGGCTGGCCTGGGAGGGGTGAT +
Preference number: 3 (lower is better)
Translates to: EGKVIPTLTPQV*PTYRGWPGRGD
Trigger: ATCACCCCTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CCA 72 bp CCCAGTCTGCTTGGGGAGTCCGGGTTCTCTGAGAGATaGGCTCCTGCTGATGCAATTAGGCTTGCAAATCCC +
Preference number: 3 (lower is better)
Translates to: PSLLGESGFSER*APADAIRLANP
Trigger: GGGATTTGCAAGCCTAATTGCATCAGCAGGAGCCCATCTCTCAGAGAACCCGGACTCCCCAAGCAGACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 72 bp TCTCCTGATTCCAGGTGGGCACCCATTTCCTTGCGCTaGGAGCACAGTGACAGGCTGGACATCCTCCCATTA +
Preference number: 3 (lower is better)
Translates to: SPDSRWAPISLR*EHSDRLDILPL
Trigger: TAATGGGAGGATGTCCAGCCTGTCACTGTGCTCCCAGCGCAAGGAAATGGGTGCCCACCTGGAATCAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 72 bp GAACAGGAGGGAAAAGCCTCTTCTCCTGATTCCAGGTaGGCACCCATTTCCTTGCGCTGGGAGCACAGTGAC +
Preference number: 3 (lower is better)
Translates to: EQEGKASSPDSR*APISLRWEHSD
Trigger: GTCACTGTGCTCCCAGCGCAAGGAAATGGGTGCCCACCTGGAATCAGGAGAAGAGGCTTTTCCCTCCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR CAA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACGGCACATCTCCGTGGTaGGCAGCTCAGGGGTCTTTG +
Preference number: 3 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYGTSPW*AAQGSL
Trigger: CAAAGACCCCTGAGCTGCCAACCACGGAGATGTGCC...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR TCA 72 bp TTGGCACATCTCCGTGGTTGGCAGCTCAGGGGTCTTTaGAGCTGCTCAGATAATGGCCCCCAAATCCAGCCT +
Preference number: 3 (lower is better)
Translates to: LAHLRGWQLRGL*SCSDNGPQIQP
Trigger: AGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGAGCTGCCAACCACGGAGATGTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR TCA 72 bp CCATGCTTTGAGAAGCCCCAAGGGAGGCTTCATGCTTaGGGGGCTCACAGGATCAGCTACAGAGACCAGGAA +
Preference number: 3 (lower is better)
Translates to: PCFEKPQGRLHA*GAHRISYRDQE
Trigger: TTCCTGGTCTCTGTAGCTGATCCTGTGAGCCCCTCAAGCATGAAGCCTCCCTTGGGGCTTCTCAAAGCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 72 bp GTGTGCAGGAGAGATGAGATGCTTGGCACATCTCCGTaGTTGGCAGCTCAGGGGTCTTTGAAGCTGCTCAGA +
Preference number: 3 (lower is better)
Translates to: VCRRDEMLGTSP*LAAQGSLKLLR
Trigger: TCTGAGCAGCTTCAAAGACCCCTGAGCTGCCAACCACGGAGATGTGCCAAGCATCTCATCTCTCCTGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR CCA 72 bp CTCTCAGCTGGCTTCCCTGGAAAGATAGCTCCACCCTaGTTGCAGAACAGGAGGGAAAAGCCTCTTCTCCTG +
Preference number: 3 (lower is better)
Translates to: LSAGFPGKIAPP*LQNRREKPLLL
Trigger: CAGGAGAAGAGGCTTTTCCCTCCTGTTCTGCAACCAGGGTGGAGCTATCTTTCCAGGGAAGCCAGCTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 72 bp ACTCTGTGGATTTTCAGCTCTCAGAGATGCCACCCGTaGCCCTCAAATCCTGGTACCAGGGTATCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: TLWIFSSQRCHP*PSNPGTRVSQQ
Trigger: CTGCTGGGATACCCTGGTACCAGGATTTGAGGGCCACGGGTGGCATCTCTGAGAGCTGAAAATCCACAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR GCA 72 bp CCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTaGCCCTTCCAAACTGTGGCTGCTTCCAGCAAAAGT +
Preference number: 3 (lower is better)
Translates to: PSWALNPNRLRS*PFQTVAASSKS
Trigger: ACTTTTGCTGGAAGCAGCCACAGTTTGGAAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR GCA 72 bp GTGATAGACACACCCCACCTGGTCAGGGAAGCTTGGTaGATTATCAGCTGCTTAGGTCTGTTAAGGCAGGGG +
Preference number: 3 (lower is better)
Translates to: VIDTPHLVREAW*IISCLGLLRQG
Trigger: CCCCTGCCTTAACAGACCTAAGCAGCTGATAATGCACCAAGCTTCCCTGACCAGGTGGGGTGTGTCTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR CAA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCGGAGAGATGAGATGCTaGGCACATCTCCGTGGTTGG +
Preference number: 3 (lower is better)
Translates to: TSGLEVTLENNIPILHLPGEMRC*AHLRGW
Trigger: CCAACCACGGAGATGTGCCAAGCATCTCATCTCTCC...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR-3UTR CAA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACCAACAGGTTGAGGTCTaGCCCCTTCCAAACTGTGGC +
Preference number: 3 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYQQVEV*PLPNCG
Trigger: GCCACAGTTTGGAAGGGGCAAGACCTCAACCTGTTG...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR TCA 72 bp CAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTaGAAGAACGGACAGTGGCTGCCTATGCAGGAGAGA +
Preference number: 3 (lower is better)
Translates to: QTKTTMALPSSV*KNGQWLPMQER
Trigger: TCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR TCA 72 bp CTCCTGTATCTACCCCTGGGCCTGGCTGCATCTGGCTaGCAGCCTTTTTCCTCTCTAGGTAATCAAAGCTCT +
Preference number: 3 (lower is better)
Translates to: LLYLPLGLAASG*QPFSSLGNQSS
Trigger: AGAGCTTTGATTACCTAGAGAGGAAAAAGGCTGTCAGCCAGATGCAGCCAGGCCCAGGGGTAGATACAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR GCA 72 bp ACAGGATCAGCTACAGAGACCAGGAAATCCTTCGGGTaGACACACATAAAGAGAGCAAGCGCAGCGCTTCAG +
Preference number: 3 (lower is better)
Translates to: TGSATETRKSFG*THIKRASAALQ
Trigger: CTGAAGCGCTGCGCTTGCTCTCTTTATGTGTGTGCACCCGAAGGATTTCCTGGTCTCTGTAGCTGATCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 72 bp TGGGTGATAGACACACCCCACCTGGTCAGGGAAGCTTaGTGCATTATCAGCTGCTTAGGTCTGTTAAGGCAG +
Preference number: 3 (lower is better)
Translates to: WVIDTPHLVREA*CIISCLGLLRQ
Trigger: CTGCCTTAACAGACCTAAGCAGCTGATAATGCACCAAGCTTCCCTGACCAGGTGGGGTGTGTCTATCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR CAA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACCGGCACATCGGCAAGTaGACGAAGGTAAAGACGTTA +
Preference number: 3 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYRHIGK*TKVKTL
Trigger: TAACGTCTTTACCTTCGTCAACTTGCCGATGTGCCG...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525557.5
3UTR TCA 72 bp CACATGCTGCCTAAGGAACCACCTCTGGGCTGGAGGTaGCACTTGAGAACAACATTCCTATTTTGCACCTGC +
Preference number: 3 (lower is better)
Translates to: HMLPKEPPLGWR*HLRTTFLFCTC
Trigger: GCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGTGGTTCCTTAGGCAGCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR-3UTR CAA 90 bp ATATTTTTCTATCTAGTTTTGAGTCAGCCTCCCATTCTTGGCCTGCCACGTGTAGGCACATCTCCGTGGTaGGCAGCTCAGGGGTCTTTG +
Preference number: 3 (lower is better)
Translates to: IFFYLVLSQPPILGLPRVGTSPW*AAQGSL
Trigger: CAAAGACCCCTGAGCTGCCAACCACGGAGATGTGCC...TACACGTGGCAGGCCAAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CAA 90 bp ACACCTTCCACCCTAACCACGCTTGACCTGGTGAGGCAAAATTCCAAACCAGAACCAGCGTCACGATCTTaGAGTCTCAGGAAGGGATTA +
Preference number: 3 (lower is better)
Translates to: TPSTLTTLDLVRQNSKPEPASRS*SLRKGL
Trigger: TAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGG...TTCTGGTTTGGAATTTTGCCTCACCAGGTCAAGCGTGGTTAGGGTGGAAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR CAA 90 bp AAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTAACAACATTCCTATTTaGCACCTGCCCTATGAGATC +
Preference number: 3 (lower is better)
Translates to: KVIPTLTPQVWPTYRGWPNNIPI*HLPYEI
Trigger: GATCTCATAGGGCAGGTGCAAAATAGGAATGTTGTT...AGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR TCA 72 bp AACTTCAGGGACACAAGCACGAACACTTCCTCCTTTTaGAACTCAGGAGGCCCTAAAGGGCACAGTCAGAAA +
Preference number: 3 (lower is better)
Translates to: NFRDTSTNTSSF*NSGGPKGHSQK
Trigger: TTTCTGACTGTGCCCTTTAGGGCCTCCTGAGTTTCAAAAGGAGGAAGTGTTCGTGCTTGTGTCCCTGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR TCA 72 bp TTCAAGATACTGGACACCTTCCACCCTAACCACGCTTaGCCTGGTGAGGCAAAATTCCAAACCAGAAGTCCA +
Preference number: 3 (lower is better)
Translates to: FKILDTFHPNHA*PGEAKFQTRSP
Trigger: TGGACTTCTGGTTTGGAATTTTGCCTCACCAGGTCAAGCGTGGTTAGGGTGGAAGGTGTCCAGTATCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR GCA 72 bp GGGGAAAAGTCCTCTCTTCTTCCATTGAAAGAGGACTaGGCGTCTGTCCTGAATGGACTTGGGAAATTCTGT +
Preference number: 3 (lower is better)
Translates to: GEKSSLLPLKED*ASVLNGLGKFC
Trigger: ACAGAATTTCCCAAGTCCATTCAGGACAGACGCGCAGTCCTCTTTCAATGGAAGAAGAGAGGACTTTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR CAA 90 bp ACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAATATTCCCCCCAAATCCAGCCTaGCAGGGGCGGAACTCCAAG +
Preference number: 3 (lower is better)
Translates to: TSSWVVPIHSSVQNISIFPPNPA*QGRNSK
Trigger: CTTGGAGTTCCGCCCCTGCAAGGCTGGATTTGGGGG...GAATATTGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CAA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTCCCCCAAATCCAGCCTaGCAGGGGCGGAACTCCAAG +
Preference number: 3 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFPPNPA*QGRNSK
Trigger: CTTGGAGTTCCGCCCCTGCAAGGCTGGATTTGGGGG...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR TCA 72 bp AATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATaGGCCTGTAAGATCGGAGGAACCAGGAGAACTTGG +
Preference number: 3 (lower is better)
Translates to: NQNRDRSTLEPG*ACKIGGTRRTW
Trigger: CCAAGTTCTCCTGGTTCCTCCGATCTTACAGGCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CCA 72 bp GCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTaGAACCTGGATGAGCCTGTAAGATCGGAGGAACCA +
Preference number: 3 (lower is better)
Translates to: AVWRIKTETEAL*NLDEPVRSEEP
Trigger: TGGTTCCTCCGATCTTACAGGCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CCA 72 bp ATTGAAAGAGGACTGCGCGTCTGTCCTGAATGGACTTaGGAAATTCTGTGTAGAGAATTCTGGAGTGACAGC +
Preference number: 3 (lower is better)
Translates to: IERGLRVCPEWT*EILCREFWSDS
Trigger: GCTGTCACTCCAGAATTCTCTACACAGAATTTCCCAAGTCCATTCAGGACAGACGCGCAGTCCTCTTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR-3UTR CAA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACGGAGAGATGAGATGCTaGGCACATCTCCGTGGTTGG +
Preference number: 3 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNGEMRC*AHLRGW
Trigger: CCAACCACGGAGATGTGCCAAGCATCTCATCTCTCC...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CAA 90 bp AGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGCAACAGGTTGAGGTCTaGCCCCTTCCAAACTGTGGC +
Preference number: 3 (lower is better)
Translates to: SLRKGLATGFKLITKFKVQQVEV*PLPNCG
Trigger: GCCACAGTTTGGAAGGGGCAAGACCTCAACCTGTTG...CACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CAA 90 bp GAGACTAAGAGTATTCATTTAGAATCTCAAATGGGTTCTGCTGAGGAAGAGGAGCTAAACCCCAACAGGTaGAGGTCTTGCCCCTTCCAA +
Preference number: 3 (lower is better)
Translates to: ETKSIHLESQMGSAEEEELNPNR*RSCPFQ
Trigger: TTGGAAGGGGCAAGACCTCAACCTGTTGGGGTTTAG...CTCCTCTTCCTCAGCAGAACCCATTTGAGATTCTAAATGAATACTCTTAGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR TCA 72 bp CAGAACAGAAAGACAAACTGCATGCAGAAGTCCTTCTaGCTAAAGTGTGCAGGAGAGATGAGATGCTTGGCA +
Preference number: 3 (lower is better)
Translates to: QNRKTNCMQKSF*LKCAGEMRCLA
Trigger: TGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGCATGCAGTTTGTCTTTCTGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR GCA 72 bp CTTGTGCTCACAAATGACCTCAATTCTGAAGCTGCCTaGAGAACAGAAAGACAAACTGCATGCAGAAGTCCT +
Preference number: 3 (lower is better)
Translates to: LVLTNDLNSEAA*RTERQTACRSP
Trigger: AGGACTTCTGCATGCAGTTTGTCTTTCTGTTCTGCAGGCAGCTTCAGAATTGAGGTCATTTGTGAGCACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
3UTR CCA 72 bp GAATTCTGGAGTGACAGCAAAGAAGGCTCTGTTGTTTaGGACATTCCCTTTAGGCACAAAGGTAGATCACAC +
Preference number: 3 (lower is better)
Translates to: EFWSDSKEGSVV*DIPFRHKGRSH
Trigger: GTGTGATCTACCTTTGTGCCTAAAGGGAATGTCCCAAACAACAGAGCCTTCTTTGCTGTCACTCCAGAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 72 bp CCTGAATGGACTTGGGAAATTCTGTGTAGAGAATTCTaGAGTGACAGCAAAGAAGGCTCTGTTGTTTGGGAC +
Preference number: 3 (lower is better)
Translates to: PEWTWEILCREF*SDSKEGSVVWD
Trigger: GTCCCAAACAACAGAGCCTTCTTTGCTGTCACTCCAGAATTCTCTACACAGAATTTCCCAAGTCCATTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 72 bp TCTTCCATTGAAAGAGGACTGCGCGTCTGTCCTGAATaGACTTGGGAAATTCTGTGTAGAGAATTCTGGAGT +
Preference number: 3 (lower is better)
Translates to: SSIERGLRVCPE*TWEILCREFWS
Trigger: ACTCCAGAATTCTCTACACAGAATTTCCCAAGTCCATTCAGGACAGACGCGCAGTCCTCTTTCAATGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CCA 72 bp CCTCCCATTCTTGGCCTGCCACGTGTAGAAACTACGTaGTTCCAGAAGCTTAGCTCTAAATATTCTAAATTC +
Preference number: 3 (lower is better)
Translates to: PPILGLPRVETT*FQKLSSKYSKF
Trigger: GAATTTAGAATATTTAGAGCTAAGCTTCTGGAACCACGTAGTTTCTACACGTGGCAGGCCAAGAATGGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CCA 72 bp ATTTTTCTATCTAGTTTTGAGTCAGCCTCCCATTCTTaGCCTGCCACGTGTAGAAACTACGTGGTTCCAGAA +
Preference number: 3 (lower is better)
Translates to: IFLSSFESASHS*PATCRNYVVPE
Trigger: TTCTGGAACCACGTAGTTTCTACACGTGGCAGGCCAAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CAA 90 bp GCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCAACAACATTCCTATTTaGCACCTGCCCTATGAGATC +
Preference number: 3 (lower is better)
Translates to: ASRSLSLRKGLATGFKLINNIPI*HLPYEI
Trigger: GATCTCATAGGGCAGGTGCAAAATAGGAATGTTGTT...GATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CAA 90 bp GCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGATGTCTGGTGAATCACAACTAAACCCCAACAGGTaGAGGTCTTGCCCCTTCCAA +
Preference number: 3 (lower is better)
Translates to: ATGFKLITKFKVMSGESQLNPNR*RSCPFQ
Trigger: TTGGAAGGGGCAAGACCTCAACCTGTTGGGGTTTAG...TTGTGATTCACCAGACATCACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR TCA 72 bp TTCAGGCAATCTCTTCTCGTCATTAACCAGCACTTCTaGCACACTCAGTTCAGTTCAGCAGGCTATGAAATT +
Preference number: 3 (lower is better)
Translates to: FRQSLLVINQHF*HTQFSSAGYEI
Trigger: AATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAATGACGAGAAGAGATTGCCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CAA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATTGGCATACAGAGGATTaGTGTCTTTACGATCATTAC +
Preference number: 3 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHWHTED*CLYDHY
Trigger: GTAATGATCGTAAAGACACAAATCCTCTGTATGCCA...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CCA 72 bp CTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATaGCATACAGAGGATTTGTGTCTTTACGATCATTAC +
Preference number: 3 (lower is better)
Translates to: LFQTKHLSANAR*HTEDLCLYDHY
Trigger: GTAATGATCGTAAAGACACAAATCCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CAA 90 bp GCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCTTTTTCTATCTAGTTTaGAGTCAGCCTCCCATTCTT +
Preference number: 3 (lower is better)
Translates to: ASRSLSLRKGLATGFKLIFFYLV*SQPPIL
Trigger: AAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAA...GATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CAA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATAACAACATTCCTATTTaGCACCTGCCCTATGAGATC +
Preference number: 3 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNNNIPI*HLPYEI
Trigger: GATCTCATAGGGCAGGTGCAAAATAGGAATGTTGTT...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CAA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTCACAAGGACAGTGCATaGTGTCACATAGAAGATCTG +
Preference number: 3 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFHKDSA*CHIEDL
Trigger: CAGATCTTCTATGTGACACAATGCACTGTCCTTGTG...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR TCA 72 bp CAGGGTGGTTTTGAAACTAGAGCATTAACCAATAAATaGCAAACCCACAAGGACAGTGCATTGTGTCACATA +
Preference number: 3 (lower is better)
Translates to: QGGFETRALTNK*QTHKDSALCHI
Trigger: TATGTGACACAATGCACTGTCCTTGTGGGTTTGTCATTTATTGGTTAATGCTCTAGTTTCAAAACCACCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CAA 90 bp AGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGTGGCATACAGAGGATTaGTGTCTTTACGATCATTAC +
Preference number: 3 (lower is better)
Translates to: SLRKGLATGFKLITKFKVWHTED*CLYDHY
Trigger: GTAATGATCGTAAAGACACAAATCCTCTGTATGCCA...CACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CAA 90 bp CCTCTTACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCATTTTTCTATCTAGTTTaGAGTCAGCCTCCCATTCTT +
Preference number: 3 (lower is better)
Translates to: PLTSSWVVPIHSSVQNISFFYLV*SQPPIL
Trigger: AAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAA...TGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGTAAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CCA 72 bp CAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTaGAACTTTCAACAGGGTGGTTTTGAAACTAGAGCA +
Preference number: 3 (lower is better)
Translates to: QQAMKFVGHINN*NFQQGGFETRA
Trigger: TGCTCTAGTTTCAAAACCACCCTGTTGAAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CAA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTTGGCATACAGAGGATTaGTGTCTTTACGATCATTAC +
Preference number: 3 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFWHTED*CLYDHY
Trigger: GTAATGATCGTAAAGACACAAATCCTCTGTATGCCA...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR-3UTR CAA 90 bp GCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGATGTCTGGTGAATCACAATTTTTCTATCTAGTTTaGAGTCAGCCTCCCATTCTT +
Preference number: 3 (lower is better)
Translates to: ATGFKLITKFKVMSGESQFFYLV*SQPPIL
Trigger: AAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAA...TTGTGATTCACCAGACATCACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCTGGCTCTGGCGGTGGTaGCTGTGGCGGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGWLWRW*LWRRLL
Trigger: CAGCAGCCGCCGCCACAGCCACCACCGCCAGAGCCA...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCCCGGCGATGTTCCCCTaGTTCCCGACGAGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLAPAMFP*FPTSRA
Trigger: GGCTCGGCTCGTCGGGAAGCAGGGGAACATCGCCGG...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCAGCCTCCACCGGCTCTaGCTCTGGCGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLASLHRL*LWRWWL
Trigger: CAGCCACCACCGCCAGAGCCAGAGCCGGTGGAGGCT...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCTGGCCTGGGAGGGGTaGTGGACTGGTGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGLAWEG*WTGAWP
Trigger: AGGCCAAGCACCAGTCCATCACCCCTCCCAGGCCAG...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCTGGCTCTGGCGGTGGTaGCTGTGGCGGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSWLWRW*LWRRLL
Trigger: CAGCAGCCGCCGCCACAGCCACCACCGCCAGAGCCA...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCACGAAGCCGACTTGCTaGGGCAGCATCTCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLATKPTC*GSISRL
Trigger: GAGGCGAGAGATGCTGCCGCAGCAAGTCGGCTTCGT...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCTTTTGTGCCCCAAGCTaGCGAAGAGGCCGGACGCAC +
Preference number: 4 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGFCAPS*RRGRTH
Trigger: GTGCGTCCGGCCTCTTCGGCAGCTTGGGGCACAAAA...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCGGATGCCCAGCAGCCTaGCCTGTGGCCAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLAGCPAA*PVARQR
Trigger: TCTTTGTCTGGCCACAGGCCAGGCTGCTGGGCATCC...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCGCTCCCAGGAGCACATaGTGCCTAAGGAACCACCTC +
Preference number: 4 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGAPRST*CLRNHL
Trigger: GAGGTGGTTCCTTAGGCAGCATGTGCTCCTGGGAGC...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCCTTCAGCGGCCAGAGTaGAATCAGTGGCCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSLQRPE*NQWPSG
Trigger: GCCGCTCGGCCACTGATTGCACTCTGGCCGCTGAAG...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGCTCTGGCTCTGGCGGTaGTGGCTGTGGCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: HTHTHSPSVANLQRLAWELWLWR*WLWRRL
Trigger: CAGCCGCCGCCACAGCCACCACCGCCAGAGCCAGAG...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCCAGCAGCCTGGCCTGTaGCCAGACAAAGACCACGAT +
Preference number: 4 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLAQQPGL*PDKDHD
Trigger: ATCGTGGTCTTTGTCTGGCCACAGGCCAGGCTGCTG...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGGCCTGGTGGTGGGGGTaGGGTCCTGTCGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: HTHTHSPSVANLQRLAWEAWWWG*GPVAGS
Trigger: TGAGCCTGCGACAGGACCTCACCCCCACCACCAGGC...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCAGAGCACCAAGGATGTaGAGCAGGACGGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSRAPRM*SRTAPC
Trigger: GCACGGAGCCGTCCTGCTGCACATCCTTGGTGCTCT...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AGCCTCGTGCGGGAAGCTCAAGGAAGCAGACAGTGTGGTCATGGGGTCTGCAGCCAGGCAGAGGCGCCCTaGCAGGGAGTGTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLVREAQGSRQCGHGVCSQAEAP*QGVCAL
Trigger: CAGAGCACACACTCCCTGGCAGGGCGCCTCTGCCTG...GCTGCAGACCCCATGACCACACTGTCTGCTTCCTTGAGCTTCCCGCACGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCGGATGCCCAGCAGCCTaGCCTGTGGCCAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSGCPAA*PVARQR
Trigger: TCTTTGTCTGGCCACAGGCCAGGCTGCTGGGCATCC...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGGCCCGGCCACAGCCCTaGCAGCAGCGCCGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRARPQP*QQRRRE
Trigger: CTCCCTACGGCGCTGCTGCCAGGGCTGTGGCCGGGC...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCTTGAACCCAGGAGGTaGAGGTTGCAACCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGLEPRR*RLQPAN
Trigger: GTTGGCTGGTTGCAACCTCCACCTCCTGGGTTCAAG...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCCTTCCTTCCAGTGTGTaGAAGAACGGACAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLALPSSV*KNGQWL
Trigger: CAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAG...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCCCTCTGGGCTGGAGGTaGCACTTGAGAACAACATTC +
Preference number: 4 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLAPLGWR*HLRTTF
Trigger: GAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGG...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp GTCCTGCCCACGGTGCCCTTAATCACCAGTCTCTCATTGCAGCTGACCCAGAACGCCTGGTGGTGGGGGTaGGGTCCTGTCGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: VLPTVPLITSLSLQLTQNAWWWG*GPVAGS
Trigger: TGAGCCTGCGACAGGACCTCACCCCCACCACCAGGC...GTTCTGGGTCAGCTGCAATGAGAGACTGGTGATTAAGGGCACCGTGGGCAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGTGGACGCGCGGTACCTaGGACCCTCGCGGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRWTRGT*DPRGEQ
Trigger: CTGCTCGCCGCGAGGGTCTCAGGTACCGCGCGTCCA...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCGGGGTAGATGGGGGTTaGTGGACTTACTGCCACCCA +
Preference number: 4 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSGVDGG*WTYCHP
Trigger: TGGGTGGCAGTAAGTCCATCAACCCCCATCTACCCC...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCAGGGAGTGTGTGCTCTaGAATGGAGACTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGRECVL*NGDSAS
Trigger: TGAGGCTGAGTCTCCATTTCAGAGCACACACTCCCT...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCTCACCACGGGGTTCTTaGCATACTGTGGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGSPRGS*HTVASP
Trigger: AGGAGAAGCCACAGTATGGCAAGAACCCCGTGGTGA...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp TGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCGCTAATCGTCCCCCAAATCCAGCCTTaGAGGGGCGGAACTCCAAGG +
Preference number: 4 (lower is better)
Translates to: CHRVSRSAPRGRDSALIVPQIQP*RGGTPR
Trigger: CCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTGGGG...GACGATTAGCGCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525557.5
CDS-3UTR GCA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCGCTTGGCCTCCCTTCTaGTATGACTGGCCATTGAAC +
Preference number: 4 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLAAWPPF*YDWPLN
Trigger: GTTCAATGGCCAGTCATAGCAGAAGGGAGGCCAAGC...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCCACCGGCTCTGGCTCTaGCGGTGGTGGCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSHRLWL*RWWLWR
Trigger: CCGCCACAGCCACCACCGCCAGAGCCAGAGCCGGTG...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGCACCGGCTCTGGCTCTaGCGGTGGTGGCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGHRLWL*RWWLWR
Trigger: CCGCCACAGCCACCACCGCCAGAGCCAGAGCCGGTG...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp GTCCTGCCCACGGTGCCCTTAATCACCAGTCTCTCATTGCAGCTGACCCAGAACAGCCTCCACCGGCTCTaGCTCTGGCGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VLPTVPLITSLSLQLTQNSLHRL*LWRWWL
Trigger: CAGCCACCACCGCCAGAGCCAGAGCCGGTGGAGGCT...GTTCTGGGTCAGCTGCAATGAGAGACTGGTGATTAAGGGCACCGTGGGCAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGCCCCTTGGGAAGGTaGGGACGCGCGACGCGGCCG +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDSPLGR*GRATRP
Trigger: CGGCCGCGTCGCGCGTCCCCACCTTCCCAAGGGGCT...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGCGGGCCAAAGCCTCATaGCCCGAGGGCGAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGRAKAS*PEGEVG
Trigger: GCCGACCTCGCCCTCGGGCCATGAGGCTTTGGCCCG...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCTATTGGCCTGGCCCGTaGACAAGTCCCAACCAACAT +
Preference number: 4 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLAYWPGP*TSPNQH
Trigger: ATGTTGGTTGGGACTTGTCCACGGGCCAGGCCAATA...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGGAAGGAGGCCTGCTGGCGGCTGCTaGGCAGGAGACACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: KERTVAAYAGETCGGGRRPAGGC*AGDTGR
Trigger: TCTGCCTGTGTCTCCTGCCCAGCAGCCGCCAGCAGG...CCTCCTTCCCCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AGCCTCGTGCGGGAAGCTCAAGGAAGCAGACAGTGTGGTCATGGGGTCTGCAGCCTTTGTGGATCTGCCTaGCCTCTCCTGGCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: SLVREAQGSRQCGHGVCSLCGSA*PLLARP
Trigger: GGGCCGAGCCAGGAGAGGCCAGGCAGATCCACAAAG...GCTGCAGACCCCATGACCACACTGTCTGCTTCCTTGAGCTTCCCGCACGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CAA 72 bp CAGACCAGCAACCCCCACTGTGGAGCTCCCCAAGAGTaGGCCACAGTGGCTCAGCCACAGTTCTGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: QTSNPHCGAPQE*ATVAQPQFCPQ
Trigger: CTGCGGACAGAACTGTGGCTGAGCCACTGTGGCCAACTCTTGGGGAGCTCCACAGTGGGGGTTGCTGGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCTCGTGCCTCCCGTTTTaGAGCGGCTTACTGCTCACA +
Preference number: 4 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSSCLPF*SGLLLT
Trigger: TGTGAGCAGTAAGCCGCTTCAAAACGGGAGGCACGA...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCGCCTGGTGGTGGGGGTaGGGTCCTGTCGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSAWWWG*GPVAGS
Trigger: TGAGCCTGCGACAGGACCTCACCCCCACCACCAGGC...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCGCCTCCTGCGAACTTTaGGCGGCCGGAGGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETASCEL*AAGGSR
Trigger: GCGGGACCCTCCGGCCGCTCAAAGTTCGCAGGAGGC...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp AGCCTCGTGCGGGAAGCTCAAGGAAGCAGACAGTGTGGTCATGGGGTCTGCAGCCCCCTCTCCATGCTTTaGGAAGCCCCAAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SLVREAQGSRQCGHGVCSPLSML*EAPREA
Trigger: AGCCTCCCTTGGGGCTTCTCAAAGCATGGAGAGGGG...GCTGCAGACCCCATGACCACACTGTCTGCTTCCTTGAGCTTCCCGCACGAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGCAGAGCCCACGATGGTaGCCACCCCGACGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGQSPRW*PPRRPH
Trigger: ATGGGGACGTCGGGGTGGGCACCATCGTGGGCTCTG...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCAATCTACAGGGGCCCTaGCTTCCCTCTTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLANLQGP*LPSLLI
Trigger: AATCAGCAAAGAGGGAAGGCAGGGCCCCTGTAGATT...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCTGTGGTCATGGGGTCTaGAGCTTAGAGGGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSCGHGV*SLEGRD
Trigger: ATCCCTGCCCTCTAAGCTGCAGACCCCATGACCACA...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGCAGCAGAGCCCACGATaGTGCCCACCCCGACGTCCC +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGQQSPR*CPPRRP
Trigger: GGGACGTCGGGGTGGGCACCATCGTGGGCTCTGCTG...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCGTTCTTGCCATACTGTaGCTTCTCCTTCACTTGCCC +
Preference number: 4 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLAVLAIL*LLLHLP
Trigger: GGGCAAGTGAAGGAGAAGCCACAGTATGGCAAGAAC...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp AGAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTGCCCCTTCTCTGGCTCTGGCGGTaGTGGCTGTGGCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RMSAIMGPKPQQVEVLPLLWLWR*WLWRRL
Trigger: CAGCCGCCGCCACAGCCACCACCGCCAGAGCCAGAG...AAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCCTCTGGCTCTGGCGGTaGTGGCTGTGGCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETLWLWR*WLWRRL
Trigger: CAGCCGCCGCCACAGCCACCACCGCCAGAGCCAGAG...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCCACCGGCTCTGGCTCTaGCGGTGGTGGCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETHRLWL*RWWLWR
Trigger: CCGCCACAGCCACCACCGCCAGAGCCAGAGCCGGTG...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp ACCAGCAACCCCCACTGTGGAGCTCCCCAAGAGTTGGCCACAGTGGCTCAGCCAGCTGGCCATGCAGTCTaGAACACTTGTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TSNPHCGAPQELATVAQPAGHAV*NTCPCC
Trigger: GCAGCAGGGACAAGTGTTCCAGACTGCATGGCCAGC...TGGCTGAGCCACTGTGGCCAACTCTTGGGGAGCTCCACAGTGGGGGTTGCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCCGCCACTTGTTTAGGTaGATGCCGAGGACGGTGAGA +
Preference number: 4 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSRHLFR*MPRTVR
Trigger: TCTCACCGTCCTCGGCATCCACCTAAACAAGTGGCG...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp ACCAGCAACCCCCACTGTGGAGCTCCCCAAGAGTTGGCCACAGTGGCTCAGCCACAGCAGCCTGGCCTGTaGCCAGACAAAGACCACGAT +
Preference number: 4 (lower is better)
Translates to: TSNPHCGAPQELATVAQPQQPGL*PDKDHD
Trigger: ATCGTGGTCTTTGTCTGGCCACAGGCCAGGCTGCTG...TGGCTGAGCCACTGTGGCCAACTCTTGGGGAGCTCCACAGTGGGGGTTGCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCCCGGGCTCGCAGGGCTaGCGCAGTCCCGGCGCTAGA +
Preference number: 4 (lower is better)
Translates to: TSGLEVTLENNIPILHLPPGSQG*RSPGAR
Trigger: TCTAGCGCCGGGACTGCGCCAGCCCTGCGAGCCCGG...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCGCGCTGCGCGCACCATaGCTCCGTGGCGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: TSGLEVTLENNIPILHLPALRAP*LRGEEA
Trigger: CGCCTCCTCGCCACGGAGCCATGGTGCGCGCAGCGC...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGGAAGGAGGCCTGGGTGCCGTCTCTaGGAGAGGATGGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: KERTVAAYAGETCGGGRRPGCRL*ERMGSF
Trigger: GAAGCTCCCCATCCTCTCCCAGAGACGGCACCCAGG...CCTCCTTCCCCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCCAGACAGTGTGGTCATaGGGTCTGCAGCTTAGAGGG +
Preference number: 4 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSQTVWS*GLQLRG
Trigger: CCCTCTAAGCTGCAGACCCCATGACCACACTGTCTG...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCCAGCCCCCGGCTGTTaGTCTTCACTGTTGATCCAT +
Preference number: 4 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSPAPGC*SSLLIH
Trigger: ATGGATCAACAGTGAAGATCAACAGCCGGGGGCTGG...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp ACCAGCAACCCCCACTGTGGAGCTCCCCAAGAGTTGGCCACAGTGGCTCAGCCAACTTGGCTATTAAGGTaGCAGAGTGGTCCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: TSNPHCGAPQELATVAQPTWLLR*QSGPEG
Trigger: GCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGT...TGGCTGAGCCACTGTGGCCAACTCTTGGGGAGCTCCACAGTGGGGGTTGCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGCTGGCCTGGGAGGGGTaGTGGACTGGTGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRLAWEG*WTGAWP
Trigger: AGGCCAAGCACCAGTCCATCACCCCTCCCAGGCCAG...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCGCCTCCTGCGAACTTTaGGCGGCCGGAGGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: TSGLEVTLENNIPILHLPASCEL*AAGGSR
Trigger: GCGGGACCCTCCGGCCGCTCAAAGTTCGCAGGAGGC...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCCAGAGCCCACGATGGTaGCCACCCCGACGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSQSPRW*PPRRPH
Trigger: ATGGGGACGTCGGGGTGGGCACCATCGTGGGCTCTG...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp CCTGGAAAGATAGCTCCACCCTGGTTGCAGAACAGGAGGGAAAAGCCTCTTCTCGGCTGGAGCAGGCGGTaGGCGACTCAGAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: PGKIAPPWLQNRREKPLLGWSRR*ATQRRG
Trigger: TCCTCGCCTCTGAGTCGCGCACCGCCTGCTCCAGCC...GAGAAGAGGCTTTTCCCTCCTGTTCTGCAACCAGGGTGGAGCTATCTTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGACGAAGCCGACTTGCTaGGGCAGCATCTCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: HTHTHSPSVANLQRLAWETKPTC*GSISRL
Trigger: GAGGCGAGAGATGCTGCCGCAGCAAGTCGGCTTCGT...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCGATCTGTGCAGTTCTTaGCTGTCTGTGTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLADLCSS*LSVSHS
Trigger: TGAATGGGACACAGACAGCCAAGAACTGCACAGATC...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCGATCTGTGCAGTTCTTaGCTGTCTGTGTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGDLCSS*LSVSHS
Trigger: TGAATGGGACACAGACAGCCAAGAACTGCACAGATC...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCAGCCTCCACCGGCTCTaGCTCTGGCGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETSLHRL*LWRWWL
Trigger: CAGCCACCACCGCCAGAGCCAGAGCCGGTGGAGGCT...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGGGATGCCCAGCAGCCTaGCCTGTGGCCAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: HTHTHSPSVANLQRLAWEGCPAA*PVARQR
Trigger: TCTTTGTCTGGCCACAGGCCAGGCTGCTGGGCATCC...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp ACACCTTCCACCCTAACCACGCTTGACCTGGTGAGGCAAAATTCCAAACCAGAAGAGCGGCGCTGGGGCTaGAGCAGGCGGTGCGCGACT +
Preference number: 4 (lower is better)
Translates to: TPSTLTTLDLVRQNSKPEERRWG*SRRCAT
Trigger: AGTCGCGCACCGCCTGCTCCAGCCCCAGCGCCGCTC...TTCTGGTTTGGAATTTTGCCTCACCAGGTCAAGCGTGGTTAGGGTGGAAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp GTCCTGCCCACGGTGCCCTTAATCACCAGTCTCTCATTGCAGCTGACCCAGAACGGCAGCCTCAGCCGCTaGCGCTGGGATTCATTCGCT +
Preference number: 4 (lower is better)
Translates to: VLPTVPLITSLSLQLTQNGSLSR*RWDSFA
Trigger: AGCGAATGAATCCCAGCGCCAGCGGCTGAGGCTGCC...GTTCTGGGTCAGCTGCAATGAGAGACTGGTGATTAAGGGCACCGTGGGCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CAA 72 bp AGGAACGGCCTTTGGTCAGGGTCTGTAGGACTGCCCTaGGGTGATAGACACACCCCACCTGGTCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: RNGLWSGSVGLP*GDRHTPPGQGS
Trigger: GCTTCCCTGACCAGGTGGGGTGTGTCTATCACCCAAGGGCAGTCCTACAGACCCTGACCAAAGGCCGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CAA 72 bp ATTGGCCTGGCCCGTGGACAAGTCCCAACCAACATGTaGCATAAGAAGCAACTGCTTGGCGGGGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: IGLARGQVPTNM*HKKQLLGGARW
Trigger: CCACCGCGCCCCGCCAAGCAGTTGCTTCTTATGCAACATGTTGGTTGGGACTTGTCCACGGGCCAGGCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCAGTGTGCAGGAGAGATaGGATGCTTGGCACATCTCC +
Preference number: 4 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSSVQER*DAWHIS
Trigger: GGAGATGTGCCAAGCATCTCATCTCTCCTGCACACT...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp TGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCGCTAATCGTCAGTGTGCAGGAGAGATaGGATGCTTGGCACATCTCC +
Preference number: 4 (lower is better)
Translates to: CHRVSRSAPRGRDSALIVSVQER*DAWHIS
Trigger: GGAGATGTGCCAAGCATCTCATCTCTCCTGCACACT...GACGATTAGCGCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525557.5
CDS-3UTR TCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCGCGCTGGGAGCACAGTaGCAGGCTGGACATCCTCCC +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETALGAQ*QAGHPP
Trigger: GGGAGGATGTCCAGCCTGTCACTGTGCTCCCAGCGC...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCGACACAAGAGTCCTCTaGTTCCATCTACCTGCTATT +
Preference number: 4 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGDTRVL*FHLPAI
Trigger: AATAGCAGGTAGATGGAATCAGAGGACTCTTGTGTC...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp AGAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTGCCCCTTCAGAGCCCACGATGGTaGCCACCCCGACGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RMSAIMGPKPQQVEVLPLQSPRW*PPRRPH
Trigger: ATGGGGACGTCGGGGTGGGCACCATCGTGGGCTCTG...AAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCCAGAGCCCACGATGGTaGCCACCCCGACGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETQSPRW*PPRRPH
Trigger: ATGGGGACGTCGGGGTGGGCACCATCGTGGGCTCTG...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCGACCGGGTTACCGTTTaGAATGCTCTTTTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLADRVTV*NALLFD
Trigger: GTCAAACAAAAGAGCATTGCAAACGGTAACCCGGTC...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AGCCTCGTGCGGGAAGCTCAAGGAAGCAGACAGTGTGGTCATGGGGTCTGCAGCCCTGTCGCAGGCTCATaGAACAGGGAACTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SLVREAQGSRQCGHGVCSPVAGS*NRELQG
Trigger: TCCCTGAAGTTCCCTGTTGCATGAGCCTGCGACAGG...GCTGCAGACCCCATGACCACACTGTCTGCTTCCTTGAGCTTCCCGCACGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCGCTTGGCCTCCCTTCTaGTATGACTGGCCATTGAAC +
Preference number: 4 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSAWPPF*YDWPLN
Trigger: GTTCAATGGCCAGTCATAGCAGAAGGGAGGCCAAGC...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGACGAAGCCGACTTGCTaGGGCAGCATCTCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGTKPTC*GSISRL
Trigger: GAGGCGAGAGATGCTGCCGCAGCAAGTCGGCTTCGT...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp ACCAGCAACCCCCACTGTGGAGCTCCCCAAGAGTTGGCCACAGTGGCTCAGCCAAGGCAGGCAGCTCTGTaGATAAGGAGGAGACACAAG +
Preference number: 4 (lower is better)
Translates to: TSNPHCGAPQELATVAQPRQAAL*IRRRHK
Trigger: CTTGTGTCTCCTCCTTATGCACAGAGCTGCCTGCCT...TGGCTGAGCCACTGTGGCCAACTCTTGGGGAGCTCCACAGTGGGGGTTGCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCGTTCTTGCCATACTGTaGCTTCTCCTTCACTTGCCC +
Preference number: 4 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSVLAIL*LLLHLP
Trigger: GGGCAAGTGAAGGAGAAGCCACAGTATGGCAAGAAC...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp AAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGGAAGGAGGCCAACTTACAGAGGCTaGCCTGGGAGGGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: KERTVAAYAGETCGGGRRPTYRG*PGRGDG
Trigger: TCCATCACCCCTCCCAGGCCAGCCTCTGTAAGTTGG...CCTCCTTCCCCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GCACGTAGACACCCAGCTTCCGGTCCAGTCGCCACTTGTTTAGGTGGATGCCGAAAGGCTTCCTGGGGCTaGATCCCAGGAACCTCACTG +
Preference number: 4 (lower is better)
Translates to: ARRHPASGPVATCLGGCRKASWG*IPGTSL
Trigger: CAGTGAGGTTCCTGGGATCCAGCCCCAGGAAGCCTT...TCGGCATCCACCTAAACAAGTGGCGACTGGACCGGAAGCTGGGTGTCTACGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525557.5
CDS-3UTR CCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGGCGCCGCGGGAAGGCTaGCTGGACGCGCGGTACCTG +
Preference number: 4 (lower is better)
Translates to: EIPTSVTIFESQEGISYWAPREG*LDARYL
Trigger: CAGGTACCGCGCGTCCAGCCAGCCTTCCCGCGGCGC...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGCCCATTTCCTTGCGCTaGGAGCACAGTGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: HTHTHSPSVANLQRLAWEPISLR*EHSDRL
Trigger: CAGCCTGTCACTGTGCTCCCAGCGCAAGGAAATGGG...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCCCATCCCGGAGCGCCTaGGTGCCGTCTCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGPSRSA*VPSLRP
Trigger: GGGTCTCAGAGACGGCACCCAGGCGCTCCGGGATGG...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531433.5
ENST00000676001.1
CDS-3UTR TCA 90 bp AAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGGAAGGAGGCCTCCAGCTCACTGTTaGCCGGGTTACCGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: KERTVAAYAGETCGGGRRPPAHC*PGYRLQ
Trigger: TTGCAAACGGTAACCCGGTCAACAGTGAGCTGGAGG...CCTCCTTCCCCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGGGCACAAGAATTGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: HTHTHSPSVANLQRLAWEGTRIA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCAATTCTTGTGCC...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGAGAGCACCAAGGATGTaGAGCAGGACGGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGRAPRM*SRTAPC
Trigger: GCACGGAGCCGTCCTGCTGCACATCCTTGGTGCTCT...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCTGGAACACTTGTCCCTaGTGCCAGGAAAGTAATGCC +
Preference number: 4 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSWNTCP*CQESNA
Trigger: GGCATTACTTTCCTGGCAGCAGGGACAAGTGTTCCA...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCCCCCAAATCCAGCCTTaGAGGGGCGGAACTCCAAGG +
Preference number: 4 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSPQIQP*RGGTPR
Trigger: CCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTGGGG...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCAACAGGTTGAGGTCTTaGCCCTTCCAAACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSNRLRS*PFQTVA
Trigger: AGCCACAGTTTGGAAGGGGCAAGACCTCAACCTGTT...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGCACACGAAGCCGACTTaGTGCGGCAGCATCTCTCGC +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRHTKPT*CGSISR
Trigger: GCGAGAGATGCTGCCGCAGCAAGTCGGCTTCGTGTG...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCTGGAGATCGCGCCACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSWRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCCA...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCTTAGAAAAACAGAGCTaGCTTGTTCACACTCCAGTC +
Preference number: 4 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGLEKQS*LVHTPV
Trigger: GACTGGAGTGTGAACAAGGCAGCTCTGTTTTTCTAA...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp GCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTTTCCCTGCTGGCGGCTaGTGGGCAGGAGACACAGGC +
Preference number: 4 (lower is better)
Translates to: ARQRPRWLFLPVCERTDSFPAGG*WAGDTG
Trigger: GCCTGTGTCTCCTGCCCAGCAGCCGCCAGCAGGGAA...ACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCTCAAAGCTCTCTTTGTaGTCAGACACCAGCAACTAT +
Preference number: 4 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLASKLSL*SDTSNY
Trigger: ATAGTTGCTGGTGTCTGAGCACAAAGAGAGCTTTGA...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCATTTCTCCACGTGTCTaGCAGGACACGTTTGCTAGC +
Preference number: 4 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSISPRV*QDTFAS
Trigger: GCTAGCAAACGTGTCCTGCCAGACACGTGGAGAAAT...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp AGCCTCGTGCGGGAAGCTCAAGGAAGCAGACAGTGTGGTCATGGGGTCTGCAGCGCCCCTTCCAAACTGTaGCTGCTTCCAGCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: SLVREAQGSRQCGHGVCSAPSKL*LLPAKV
Trigger: GACTTTTGCTGGAAGCAGCCACAGTTTGGAAGGGGC...GCTGCAGACCCCATGACCACACTGTCTGCTTCCTTGAGCTTCCCGCACGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGCTCACTCCCCAAGTGTaGCCAACTTACAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HTHTHSPSVANLQRLAWELTPQV*PTYRGW
Trigger: CCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAG...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACCGGGAACTTTCTCTCTaGCTTCTCGGCTGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDRELSL*LLGCGR
Trigger: GCGCCCGCAGCCGAGAAGCCAGAGAGAAAGTTCCCG...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp ACACCTTCCACCCTAACCACGCTTGACCTGGTGAGGCAAAATTCCAAACCAGAACCATCCCGGAGCGCCTaGGTGCCGTCTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: TPSTLTTLDLVRQNSKPEPSRSA*VPSLGE
Trigger: CTCTCCCAGAGACGGCACCCAGGCGCTCCGGGATGG...TTCTGGTTTGGAATTTTGCCTCACCAGGTCAAGCGTGGTTAGGGTGGAAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCTTAGAGCATGGCATTTaGGTACAATCTCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGLEHGI*VQSPED
Trigger: ATCCTCAGGAGATTGTACCCAAATGCCATGCTCTAA...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp ACCAGCAACCCCCACTGTGGAGCTCCCCAAGAGTTGGCCACAGTGGCTCAGCCAAAGATAGCTCCACCCTaGTTGCAGAACAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: TSNPHCGAPQELATVAQPKIAPP*LQNRRE
Trigger: TTCCCTCCTGTTCTGCAACCAGGGTGGAGCTATCTT...TGGCTGAGCCACTGTGGCCAACTCTTGGGGAGCTCCACAGTGGGGGTTGCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGTCCCCTTGGGCTTTGTaGATCTGCCTGGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGSPWAL*ICLASP
Trigger: AGGAGAGGCCAGGCAGATCCACAAAGCCCAAGGGGA...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGCCAGCCCCCGGCTGTTaGTCTTCACTGTTGATCCAT +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGPAPGC*SSLLIH
Trigger: ATGGATCAACAGTGAAGATCAACAGCCGGGGGCTGG...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCTTTGCACCTGCCCTATaGGATCTTGTGCTCACAAAT +
Preference number: 4 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSFAPAL*DLVLTN
Trigger: ATTTGTGAGCACAAGATCTCATAGGGCAGGTGCAAA...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGGCCTCCCTTCTGCTATaGCTGGCCATTGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: HTHTHSPSVANLQRLAWEASLLL*LAIELE
Trigger: CTCTAGTTCAATGGCCAGTCATAGCAGAAGGGAGGC...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCGAACCCAGGAGTCAATaGTATATTGATGAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGEPRSQ*YIDEVL
Trigger: CAAAACCTCATCAATATATCATTGACTCCTGGGTTC...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp AAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGGAAGGAGGTTAACAACCATGGTCTaGAGGCCCCACGGTACACCA +
Preference number: 4 (lower is better)
Translates to: KERTVAAYAGETCGGGRRLTTMV*RPHGTP
Trigger: TGGTGTACCGTGGGGCCTGCAGACCATGGTTGTTAA...CCTCCTTCCCCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CCTGGAAAGATAGCTCCACCCTGGTTGCAGAACAGGAGGGAAAAGCCTCTTCTCCCCCAAATCCAGCCTTaGAGGGGCGGAACTCCAAGG +
Preference number: 4 (lower is better)
Translates to: PGKIAPPWLQNRREKPLLPQIQP*RGGTPR
Trigger: CCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTGGGG...GAGAAGAGGCTTTTCCCTCCTGTTCTGCAACCAGGGTGGAGCTATCTTTCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp AAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGGAAGGAGGGCAGGAGAGATGAGATaGTTGGCACATCTCCGTGGT +
Preference number: 4 (lower is better)
Translates to: KERTVAAYAGETCGGGRRAGEMR*LAHLRG
Trigger: ACCACGGAGATGTGCCAAGCATCTCATCTCTCCTGC...CCTCCTTCCCCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCCCTATGAGATCTTGTaGTCACAAATGACCTCAATT +
Preference number: 4 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGPYEIL*SQMTSI
Trigger: AATTGAGGTCATTTGTGAGCACAAGATCTCATAGGG...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGGCTCCCAGGAGCACATaGTGCCTAAGGAACCACCTC +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRAPRST*CLRNHL
Trigger: GAGGTGGTTCCTTAGGCAGCATGTGCTCCTGGGAGC...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCGCTCCCAGGAGCACATaGTGCCTAAGGAACCACCTC +
Preference number: 4 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSAPRST*CLRNHL
Trigger: GAGGTGGTTCCTTAGGCAGCATGTGCTCCTGGGAGC...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAAGGGCCCCTCTCCATaGTTTGAGAAGCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRKGPSP*FEKPQG
Trigger: CCCTTGGGGCTTCTCAAAGCATGGAGAGGGGCCCTT...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACTGGGGAACAGCTCTTTaGAGCAAGGCGAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDWGTAL*SKAKGP
Trigger: GGGCCCCTTCGCCTTGCTGCAAAGAGCTGTTCCCCA...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCGATCTGTGCAGTTCTTaGCTGTCTGTGTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSDLCSS*LSVSHS
Trigger: TGAATGGGACACAGACAGCCAAGAACTGCACAGATC...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCACATCTTCGCTCAGATaGAGTCTCTCACAGATCTTC +
Preference number: 4 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSTSSLR*SLSQIF
Trigger: GAAGATCTGTGAGAGACTCCATCTGAGCGAAGATGT...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp AGAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTGCCCCTTGTCAGACGGACCACCTaGCCAGCAAACAGTCCGCAC +
Preference number: 4 (lower is better)
Translates to: RMSAIMGPKPQQVEVLPLVRRTT*PANSPH
Trigger: GTGCGGACTGTTTGCTGGCCAGGTGGTCCGTCTGAC...AAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGTGGCTCTGGCGGTGGTaGCTGTGGCGGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRWLWRW*LWRRLL
Trigger: CAGCAGCCGCCGCCACAGCCACCACCGCCAGAGCCA...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACGGATGCCCAGCAGCCTaGCCTGTGGCCAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDGCPAA*PVARQR
Trigger: TCTTTGTCTGGCCACAGGCCAGGCTGCTGGGCATCC...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCCGTGTAGAAACTACGTaGTTCCAGAAGCTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSRVETT*FQKLSS
Trigger: AGAGCTAAGCTTCTGGAACCACGTAGTTTCTACACG...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGCTCACTCCCCAAGTGTaGCCAACTTACAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGLTPQV*PTYRGW
Trigger: CCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAG...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGTCGTGCCTCCCGTTTTaGAGCGGCTTACTGCTCACA +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRSCLPF*SGLLLT
Trigger: TGTGAGCAGTAAGCCGCTTCAAAACGGGAGGCACGA...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTGGATGCCGAGGACGGTaGGAGCGACAGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSGCRGR*ERQSPA
Trigger: TGCTGGGCTCTGTCGCTCTCACCGTCCTCGGCATCC...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGCCTCTGGGCTGGAGGTaGCACTTGAGAACAACATTC +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGPLGWR*HLRTTF
Trigger: GAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGG...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCACAAAAAGAGAAGCCTaGACTTGGTGTAGCTACGAT +
Preference number: 4 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSTKREA*TWCSYD
Trigger: ATCGTAGCTACACCAAGTTCAGGCTTCTCTTTTTGT...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGGCCACACGCATTTGCTaGGAGTGGATCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGATRIC*EWITGT
Trigger: TGTCCCTGTGATCCACTCTCAGCAAATGCGTGTGGC...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp GTCCTGCCCACGGTGCCCTTAATCACCAGTCTCTCATTGCAGCTGACCCAGAACCCTCTCTTCTTCCATTaGAAGAGGACTGCGCGTCTG +
Preference number: 4 (lower is better)
Translates to: VLPTVPLITSLSLQLTQNPLFFH*KRTARL
Trigger: CAGACGCGCAGTCCTCTTTCAATGGAAGAAGAGAGG...GTTCTGGGTCAGCTGCAATGAGAGACTGGTGATTAAGGGCACCGTGGGCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTCAGAGCCCACGATGGTaGCCACCCCGACGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSQSPRW*PPRRPH
Trigger: ATGGGGACGTCGGGGTGGGCACCATCGTGGGCTCTG...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AGCCTCGTGCGGGAAGCTCAAGGAAGCAGACAGTGTGGTCATGGGGTCTGCAGCAACACTTGTCCCTGCTaGCAGGAAAGTAATGCCCAT +
Preference number: 4 (lower is better)
Translates to: SLVREAQGSRQCGHGVCSNTCPC*QESNAH
Trigger: ATGGGCATTACTTTCCTGGCAGCAGGGACAAGTGTT...GCTGCAGACCCCATGACCACACTGTCTGCTTCCTTGAGCTTCCCGCACGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp AAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGGAAGGAGGCAATTAGGCTGGCCATaGAGTCTGGAACACTTGTCC +
Preference number: 4 (lower is better)
Translates to: KERTVAAYAGETCGGGRRQLGWP*SLEHLS
Trigger: GGACAAGTGTTCCAGACTGCATGGCCAGCCTAATTG...CCTCCTTCCCCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGAGAACGGACAGTGGCTaGCTATGCAGGAGAGACCTG +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGRTDSG*LCRRDL
Trigger: CAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCT...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCCCCCAAATCCAGCCTTaGAGGGGCGGAACTCCAAGG +
Preference number: 4 (lower is better)
Translates to: TSGLEVTLENNIPILHLPPQIQP*RGGTPR
Trigger: CCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTGGGG...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGCAGGAGAGATGAGATaGTTGGCACATCTCCGTGGT +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGAGEMR*LAHLRG
Trigger: ACCACGGAGATGTGCCAAGCATCTCATCTCTCCTGC...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AGAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTGCCCCTTGCTCCCAGGAGCACATaGTGCCTAAGGAACCACCTC +
Preference number: 4 (lower is better)
Translates to: RMSAIMGPKPQQVEVLPLAPRST*CLRNHL
Trigger: GAGGTGGTTCCTTAGGCAGCATGTGCTCCTGGGAGC...AAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCCACACGAAGCCGACTTaGTGCGGCAGCATCTCTCGC +
Preference number: 4 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGHTKPT*CGSISR
Trigger: GCGAGAGATGCTGCCGCAGCAAGTCGGCTTCGTGTG...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACCTGGGAGGCGGAGGTTaGAGTGAGCCAAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYLGGGG*SEPRWH
Trigger: GTGCCATCTTGGCTCACTGCAACCTCCGCCTCCCAG...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTGCATAAGAAGCAACTaGTTGGCGGGGCGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: TSGLEVTLENNIPILHLPCIRSN*LAGRGG
Trigger: GCCACCGCGCCCCGCCAAGCAGTTGCTTCTTATGCA...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp ACACCTTCCACCCTAACCACGCTTGACCTGGTGAGGCAAAATTCCAAACCAGAACCAGCAACTATTCCCTaGTGGCGGCTGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TPSTLTTLDLVRQNSKPEPATIP*WRLLGR
Trigger: CCTGCCCAGCAGCCGCCAGCAGGGAATAGTTGCTGG...TTCTGGTTTGGAATTTTGCCTCACCAGGTCAAGCGTGGTTAGGGTGGAAGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGATTTCTCCACGTGTCTaGCAGGACACGTTTGCTAGC +
Preference number: 4 (lower is better)
Translates to: HTHTHSPSVANLQRLAWEISPRV*QDTFAS
Trigger: GCTAGCAAACGTGTCCTGCCAGACACGTGGAGAAAT...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGCAGCAGAGCCCACGATaGTGCCCACCCCGACGTCCC +
Preference number: 4 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRQQSPR*CPPRRP
Trigger: GGGACGTCGGGGTGGGCACCATCGTGGGCTCTGCTG...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATCACCGGCTCTGGCTCTaGCGGTGGTGGCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHHRLWL*RWWLWR
Trigger: CCGCCACAGCCACCACCGCCAGAGCCAGAGCCGGTG...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp ACCACGCTTGACCTGGTGAGGCAAAATTCCAAACCAGAAGTCCACAGGAACCACGGATGCCCAGCAGCCTaGCCTGTGGCCAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: TTLDLVRQNSKPEVHRNHGCPAA*PVARQR
Trigger: TCTTTGTCTGGCCACAGGCCAGGCTGCTGGGCATCC...GTGGTTCCTGTGGACTTCTGGTTTGGAATTTTGCCTCACCAGGTCAAGCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACCTTGGCACATCTCCGTaGTTGGCAGCTCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDLGTSP*LAAQGS
Trigger: AGACCCCTGAGCTGCCAACCACGGAGATGTGCCAAG...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGAATGTCTGCCATCATaGGCCCTAAACCCCAACAGG +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGECLPS*ALNPNR
Trigger: CCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTC...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGTCAGCCTCCCATTCTTaGCCTGCCACGTGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGSASHS*PATCRN
Trigger: GTTTCTACACGTGGCAGGCCAAGAATGGGAGGCTGA...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGCTCACTCCCCAAGTGTaGCCAACTTACAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRLTPQV*PTYRGW
Trigger: CCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAG...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACGTCTCTGGGAGAGGATaGGGAGCTTCAGCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYVSGRG*GASAAR
Trigger: TCTGGCCGCTGAAGCTCCCCATCCTCTCCCAGAGAC...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCAAGAAACCTGGACCTTaGGCCGCCCAGGAACGGCCT +
Preference number: 4 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGKKPGP*AAQERP
Trigger: AGGCCGTTCCTGGGCGGCCCAAGGTCCAGGTTTCTT...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACCTCAGCCGCTGGCGCTaGGATTCATTCGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDLSRWR*DSFALA
Trigger: AGCAAGAGCGAATGAATCCCAGCGCCAGCGGCTGAG...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGGTGGCCCTCAAATCCTaGTACCAGGGTATCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGVALKS*YQGIPA
Trigger: TGCTGGGATACCCTGGTACCAGGATTTGAGGGCCAC...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCACACAGCCAAGGGCTTaGCTTTCCCACAGGCACTCT +
Preference number: 4 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSTQPRA*LSHRHS
Trigger: AGAGTGCCTGTGGGAAAGCCAAGCCCTTGGCTGTGT...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AGCCTCGTGCGGGAAGCTCAAGGAAGCAGACAGTGTGGTCATGGGGTCTGCAGCAGAATTTTATTGGCCTaGCCCGTGGACAAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: SLVREAQGSRQCGHGVCSRILLA*PVDKSQ
Trigger: TTGGGACTTGTCCACGGGCCAGGCCAATAAAATTCT...GCTGCAGACCCCATGACCACACTGTCTGCTTCCTTGAGCTTCCCGCACGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACGAGCTCCCCAAGAGTTaGCCACAGTGGCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYELPKS*PQWLSH
Trigger: GTGGCTGAGCCACTGTGGCCAACTCTTGGGGAGCTC...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AGAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTGCCCCTTGGGCCTGGCTGCATCTaGCTGACAGCCTTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RMSAIMGPKPQQVEVLPLGPGCI*LTAFFL
Trigger: GAGGAAAAAGGCTGTCAGCCAGATGCAGCCAGGCCC...AAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CAA 72 bp GAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTaGAGGTCTTGCCCCTTCCAAACTGTGGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: ECLPSWALNPNR*RSCPFQTVAAS
Trigger: GGAAGCAGCCACAGTTTGGAAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGAAACAGCTCTGGCGTTaGGCTTCCTGCAGCCATGAA +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGKQLWR*ASCSHE
Trigger: TTCATGGCTGCAGGAAGCTCAACGCCAGAGCTGTTT...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACCCTCCAGCTCACTGTTaGCCGGGTTACCGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDPPAHC*PGYRLQ
Trigger: TTGCAAACGGTAACCCGGTCAACAGTGAGCTGGAGG...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGCTTCCTTCCAGTGTGTaGAAGAACGGACAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGLPSSV*KNGQWL
Trigger: CAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAG...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGCAGCTCAGGGGTCTTTaGAGCTGCTCAGATAATGGC +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRQLRGL*SCSDNG
Trigger: GCCATTATCTGAGCAGCTTCAAAGACCCCTGAGCTG...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp ACCAGCAACCCCCACTGTGGAGCTCCCCAAGAGTTGGCCACAGTGGCTCAGCCAGCTGGAGGTGACACTTaGGAACAACATTCCTATTTT +
Preference number: 4 (lower is better)
Translates to: TSNPHCGAPQELATVAQPAGGDT*EQHSYF
Trigger: AAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGC...TGGCTGAGCCACTGTGGCCAACTCTTGGGGAGCTCCACAGTGGGGGTTGCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCGCTGGAGGTGACACTTaGGAACAACATTCCTATTTT +
Preference number: 4 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSAGGDT*EQHSYF
Trigger: AAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGC...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGCCCTCGTCCTCAAGTTaGAGACCACTGAGCCCAATT +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRPSSSS*RPLSPI
Trigger: AATTGGGCTCAGTGGTCTTCAACTTGAGGACGAGGG...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGGCCTCCCTTCTGCTATaGCTGGCCATTGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGASLLL*LAIELE
Trigger: CTCTAGTTCAATGGCCAGTCATAGCAGAAGGGAGGC...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCGAACCCAGGAGTCAATaGTATATTGATGAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSEPRSQ*YIDEVL
Trigger: CAAAACCTCATCAATATATCATTGACTCCTGGGTTC...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp AAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGGAAGGAGGAGGATACGTGTGCTCTaGAAGCTACACAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: KERTVAAYAGETCGGGRRRIRVL*KLHKAS
Trigger: TGAAGCCTTGTGTAGCTTTCAGAGCACACGTATCCT...CCTCCTTCCCCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCCACCCTAACCACGCTTaGCCTGGTGAGGCAAAATTC +
Preference number: 4 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSHPNHA*PGEAKF
Trigger: GAATTTTGCCTCACCAGGTCAAGCGTGGTTAGGGTG...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCAGGAGGAGACACAAGTaGCAAGGGGAAGAGGCATGG +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETRRRHK*QGEEAW
Trigger: CCATGCCTCTTCCCCTTGTCACTTGTGTCTCCTCCT...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp AGAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTGCCCCTTGGCTTCTCCTTCACTTaGCCCAGCAATGGCACGGAA +
Preference number: 4 (lower is better)
Translates to: RMSAIMGPKPQQVEVLPLGFSFT*PSNGTE
Trigger: TTCCGTGCCATTGCTGGGGCAAGTGAAGGAGAAGCC...AAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACGGCTTCTCCTTCACTTaGCCCAGCAATGGCACGGAA +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDGFSFT*PSNGTE
Trigger: TTCCGTGCCATTGCTGGGGCAAGTGAAGGAGAAGCC...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGTCACCACGGGGTTCTTaGCATACTGTGGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRSPRGS*HTVASP
Trigger: AGGAGAAGCCACAGTATGGCAAGAACCCCGTGGTGA...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGTTTGAAGCGGCTTACTaGTCACACCATTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGFEAAY*SHHWPS
Trigger: ACTCGGCCAATGGTGTGAGCAGTAAGCCGCTTCAAA...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGTATGGTGTTGGAGACTaGCATGTCCCCAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRYGVGD*HVPKAL
Trigger: CAAGGCCTTGGGGACATGGCAGTCTCCAACACCATA...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGTATGGTGTTGGAGACTaGCATGTCCCCAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGYGVGD*HVPKAL
Trigger: CAAGGCCTTGGGGACATGGCAGTCTCCAACACCATA...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTAGAACGGACAGTGGCTaGCTATGCAGGAGAGACCTG +
Preference number: 4 (lower is better)
Translates to: KVIPTLTPQVWPTYRGWPRTDSG*LCRRDL
Trigger: CAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCT...AGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCGCTCCCAGGAGCACATaGTGCCTAAGGAACCACCTC +
Preference number: 4 (lower is better)
Translates to: TSGLEVTLENNIPILHLPAPRST*CLRNHL
Trigger: GAGGTGGTTCCTTAGGCAGCATGTGCTCCTGGGAGC...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCCCTGTCGCAGGCTCATaGAACAGGGAACTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETPVAGS*NRELQG
Trigger: TCCCTGAAGTTCCCTGTTGCATGAGCCTGCGACAGG...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACGTGAAAGACAACCCGTaGCCCTGGCAGTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDVKDNP*PWQCVL
Trigger: AAGCACACACTGCCAGGGGCACGGGTTGTCTTTCAC...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACCAGGTCCAAGCCTCGTaGGGGAAGCTCAAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYQVQAS*GKLKEA
Trigger: TGCTTCCTTGAGCTTCCCGCACGAGGCTTGGACCTG...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGATTTCTCCACGTGTCTaGCAGGACACGTTTGCTAGC +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGISPRV*QDTFAS
Trigger: GCTAGCAAACGTGTCCTGCCAGACACGTGGAGAAAT...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGTGGAGAACAGATCTGTaGGGAACTCGTGAATCGCAG +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGWRTDL*GTRESQ
Trigger: CTGCGATTCACGAGTTCCCCACAGATCTGTTCTCCA...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp GTCTCTGAGTTAGCACCTTTCCACGTTAGTCTCTTACCTTTTTCCCTATTCCAACTCTGGCTCTGGCGGTaGTGGCTGTGGCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: VSELAPFHVSLLPFSLFQLWLWR*WLWRRL
Trigger: CAGCCGCCGCCACAGCCACCACCGCCAGAGCCAGAG...TTGGAATAGGGAAAAAGGTAAGAGACTAACGTGGAAAGGTGCTAACTCAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGCTGGCCATGCAGTCTaGAACACTTGTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ARQRPRWLFLPVCERTDSAGHAV*NTCPCC
Trigger: GCAGCAGGGACAAGTGTTCCAGACTGCATGGCCAGC...ACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp GCACGTAGACACCCAGCTTCCGGTCCAGTCGCCACTTGTTTAGGTGGATGCCGAAGACAAAGACCACGATaGCTCTTCCTTCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: ARRHPASGPVATCLGGCRRQRPR*LFLPVC
Trigger: ACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT...TCGGCATCCACCTAAACAAGTGGCGACTGGACCGGAAGCTGGGTGTCTACGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525557.5
CDS-3UTR CCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACCAGCAGCCTGGCCTGTaGCCAGACAAAGACCACGAT +
Preference number: 4 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYQQPGL*PDKDHD
Trigger: ATCGTGGTCTTTGTCTGGCCACAGGCCAGGCTGCTG...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGGCCCCTTCCAAACTGTaGCTGCTTCCAGCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRAPSKL*LLPAKV
Trigger: GACTTTTGCTGGAAGCAGCCACAGTTTGGAAGGGGC...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCGGGCATATAAATAACTaGAACTTTCAACAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSGHINN*NFQQGG
Trigger: ACCACCCTGTTGAAAGTTCCAGTTATTTATATGCCC...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp AGCCTCGTGCGGGAAGCTCAAGGAAGCAGACAGTGTGGTCATGGGGTCTGCAGCCGTGTAGAAACTACGTaGTTCCAGAAGCTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: SLVREAQGSRQCGHGVCSRVETT*FQKLSS
Trigger: AGAGCTAAGCTTCTGGAACCACGTAGTTTCTACACG...GCTGCAGACCCCATGACCACACTGTCTGCTTCCTTGAGCTTCCCGCACGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCCGCCACTTGTTTAGGTaGATGCCGAGGACATTCCTC +
Preference number: 4 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSRHLFR*MPRTFL
Trigger: GAGGAATGTCCTCGGCATCCACCTAAACAAGTGGCG...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525557.5
CDS-3UTR CCA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTCGGGAACTTTCTCTCTaGCTTCTCGGCTGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSRELSL*LLGCGR
Trigger: GCGCCCGCAGCCGAGAAGCCAGAGAGAAAGTTCCCG...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCCCAGAGTGCAATCAGTaGCCGAGCGGCGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSPECNQ*PSGAGA
Trigger: AGCCCCAGCGCCGCTCGGCCACTGATTGCACTCTGG...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AGAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTGCCCCTTGACAACCCGTGCCCCTaGCAGTGTGTGCTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: RMSAIMGPKPQQVEVLPLDNPCP*QCVLVN
Trigger: ATTCACAAGCACACACTGCCAGGGGCACGGGTTGTC...AAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCAAGAGTTGGCCACAGTaGCTCAGCCACAGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSKSWPQ*LSHSSV
Trigger: GACAGAACTGTGGCTGAGCCACTGTGGCCAACTCTT...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATCCATCCCGGAGCGCCTaGGTGCCGTCTCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHPSRSA*VPSLRP
Trigger: GGGTCTCAGAGACGGCACCCAGGCGCTCCGGGATGG...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531433.5
CDS-3UTR TCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTCTGTGGGGAACTCGTaGATCGCAGGATCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: TSGLEVTLENNIPILHLPSVGNS*IAGSVQ
Trigger: CTGCACAGATCCTGCGATTCACGAGTTCCCCACAGA...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp GCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTTCTGTGGGGAACTCGTaGATCGCAGGATCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: ARQRPRWLFLPVCERTDSSVGNS*IAGSVQ
Trigger: CTGCACAGATCCTGCGATTCACGAGTTCCCCACAGA...ACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp AAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTAAACAGCTCTGGCGTTaGGCTTCCTGCAGCCATGAA +
Preference number: 4 (lower is better)
Translates to: KVIPTLTPQVWPTYRGWPKQLWR*ASCSHE
Trigger: TTCATGGCTGCAGGAAGCTCAACGCCAGAGCTGTTT...AGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCCACCATTGGCCGAGTTaGTCAGTCTCTGCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGHHWPS*SVSAAH
Trigger: ATGAGCGGCAGAGACTGATCAACTCGGCCAATGGTG...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp GCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTTCGTGCCTCCCGTTTTaGAGCGGCTTACTGCTCACA +
Preference number: 4 (lower is better)
Translates to: ARQRPRWLFLPVCERTDSSCLPF*SGLLLT
Trigger: TGTGAGCAGTAAGCCGCTTCAAAACGGGAGGCACGA...ACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATGGATGCCGAGGACGGTaGGAGCGACAGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHGCRGR*ERQSPA
Trigger: TGCTGGGCTCTGTCGCTCTCACCGTCCTCGGCATCC...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCCTTCCTTCCAGTGTGTaGAAGAACGGACAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETLPSSV*KNGQWL
Trigger: CAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAG...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCAGTGTGCAGGAGAGATaGGATGCTTGGCACATCTCC +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETSVQER*DAWHIS
Trigger: GGAGATGTGCCAAGCATCTCATCTCTCCTGCACACT...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp AAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGGAAGGAGGTTTGCACCTGCCCTATaGGATCTTGTGCTCACAAAT +
Preference number: 4 (lower is better)
Translates to: KERTVAAYAGETCGGGRRFAPAL*DLVLTN
Trigger: ATTTGTGAGCACAAGATCTCATAGGGCAGGTGCAAA...CCTCCTTCCCCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCCCCTCGTCCTCAAGTTaGAGACCACTGAGCCCAATT +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETPSSSS*RPLSPI
Trigger: AATTGGGCTCAGTGGTCTTCAACTTGAGGACGAGGG...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp AAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGGAAGGAGGACAGATATTAGGAAATaGCCTGAGGAACCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: KERTVAAYAGETCGGGRRTDIRK*PEEPRS
Trigger: ACTCCTGGGTTCCTCAGGTCATTTCCTAATATCTGT...CCTCCTTCCCCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGAAGGCTTCAGAGAATTaGAAACCAGCAGGGACGCCA +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGKASEN*KPAGTP
Trigger: TGGCGTCCCTGCTGGTTTTCAATTCTCTGAAGCCTT...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGCCTCACTGGAGCAGGTaGGAGCGACAGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRPHWSR*ERQSPA
Trigger: TGCTGGGCTCTGTCGCTCTCACCTGCTCCAGTGAGG...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525557.5
CDS-3UTR TCA 90 bp ACCACGCTTGACCTGGTGAGGCAAAATTCCAAACCAGAAGTCCACAGGAACCACGTCTCTCATTGCAGCTaGCCCAGAACCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TTLDLVRQNSKPEVHRNHVSHCS*PRTFLQ
Trigger: CTGGAGGAAGGTTCTGGGTCAGCTGCAATGAGAGAC...GTGGTTCCTGTGGACTTCTGGTTTGGAATTTTGCCTCACCAGGTCAAGCGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp ACCACGCTTGACCTGGTGAGGCAAAATTCCAAACCAGAAGTCCACAGGAACCACGGTGGGAGAATCACTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TTLDLVRQNSKPEVHRNHGGRIT*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGTGATTCTCCCACC...GTGGTTCCTGTGGACTTCTGGTTTGGAATTTTGCCTCACCAGGTCAAGCGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp AAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGGAAGGAGGACATTTGTTTTCCAGTaGTGGGGTGATGAGGGTACT +
Preference number: 4 (lower is better)
Translates to: KERTVAAYAGETCGGGRRTFVFQ*WGDEGT
Trigger: AGTACCCTCATCACCCCATCACTGGAAAACAAATGT...CCTCCTTCCCCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCGAATCGCAGGATCTGTaGAGTTCTTGGCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSESQDL*SSWLSV
Trigger: CACAGACAGCCAAGAACTGCACAGATCCTGCGATTC...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp AGAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTGCCCCTTTCACCACGGGGTTCTTaGCATACTGTGGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RMSAIMGPKPQQVEVLPLSPRGS*HTVASP
Trigger: AGGAGAAGCCACAGTATGGCAAGAACCCCGTGGTGA...AAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGTGGAACACTTGTCCCTaGTGCCAGGAAAGTAATGCC +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGWNTCP*CQESNA
Trigger: GGCATTACTTTCCTGGCAGCAGGGACAAGTGTTCCA...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTATGGTGTTGGAGACTaGCATGTCCCCAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETYGVGD*HVPKAL
Trigger: CAAGGCCTTGGGGACATGGCAGTCTCCAACACCATA...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp GCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTAGAACGGACAGTGGCTaGCTATGCAGGAGAGACCTG +
Preference number: 4 (lower is better)
Translates to: ARQRPRWLFLPVCERTDSRTDSG*LCRRDL
Trigger: CAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCT...ACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAACAGGTTGAGGTCTTaGCCCTTCCAAACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRNRLRS*PFQTVA
Trigger: AGCCACAGTTTGGAAGGGGCAAGACCTCAACCTGTT...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGACACCTCAGTGCCAATaGAAGATGGCATACAGAGGA +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGTPQCQ*KMAYRG
Trigger: TCCTCTGTATGCCATCTTGCATTGGCACTGAGGTGT...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGGGGCCATGTGGCCTGTaGCTTGCCATAGCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGGPCGL*LAIAKN
Trigger: ATTTTTAGCTATGGCAAGGCACAGGCCACATGGCCC...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATTTTTGTGCCCCAAGCTaGCGAAGAGGCCGGACGCAC +
Preference number: 4 (lower is better)
Translates to: SGLEVTLENNIPILHLPYFCAPS*RRGRTH
Trigger: GTGCGTCCGGCCTCTTCGGCAGCTTGGGGCACAAAA...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGATCTGTGCAGTTCTTaGCTGTCTGTGTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGDLCSS*LSVSHS
Trigger: TGAATGGGACACAGACAGCCAAGAACTGCACAGATC...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCTGGAGAACAGATCTGTaGGGAACTCGTGAATCGCAG +
Preference number: 4 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSWRTDL*GTRESQ
Trigger: CTGCGATTCACGAGTTCCCCACAGATCTGTTCTCCA...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGTGGAGAACAGATCTGTaGGGAACTCGTGAATCGCAG +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGWRTDL*GTRESQ
Trigger: CTGCGATTCACGAGTTCCCCACAGATCTGTTCTCCA...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp ACCAGCAACCCCCACTGTGGAGCTCCCCAAGAGTTGGCCACAGTGGCTCAGCCACCTCTTACATCATCATaGGTAGTTCCCATACATTCA +
Preference number: 4 (lower is better)
Translates to: TSNPHCGAPQELATVAQPPLTSS*VVPIHS
Trigger: TGAATGTATGGGAACTACCCATGATGATGTAAGAGG...TGGCTGAGCCACTGTGGCCAACTCTTGGGGAGCTCCACAGTGGGGGTTGCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGATTAAGGTGACAGAGTaGTCCCGAGGGCTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRIKVTE*SRGLWN
Trigger: ATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAAT...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACACAGGAAGGATGGGGTaGGTAAGGCGAGGACTGTGT +
Preference number: 4 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYTGRMG*VRRGLC
Trigger: ACACAGTCCTCGCCTTACCCACCCCATCCTTCCTGT...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATCAGGTGGAAGAAACCTaGACCTTGGGCCGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SGLEVTLENNIPILHLPYQVEET*TLGRPG
Trigger: TCCTGGGCGGCCCAAGGTCCAGGTTTCTTCCACCTG...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGCAGCAACCCCCACTGTaGAGCTCCCCAAGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: EIPTSVTIFESQEGISYWQQPPL*SSPRVG
Trigger: GCCAACTCTTGGGGAGCTCCACAGTGGGGGTTGCTG...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACTCACCAGCCACACCATaGTGTAGGAGAACACAGCGA +
Preference number: 4 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYSPATP*CRRTQR
Trigger: TCGCTGTGTTCTCCTACATCATGGTGTGGCTGGTGA...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TACCTTTTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATAGGATGCCGAGGACGGTaGGAGCGACAGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: YLFPYSKPNTSVPMQDGIGCRGR*ERQSPA
Trigger: TGCTGGGCTCTGTCGCTCTCACCGTCCTCGGCATCC...TATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAAAAGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACCTTCCTTCCAGTGTGTaGAAGAACGGACAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYLPSSV*KNGQWL
Trigger: CAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAG...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCCAGCTCAGGGGTCTTTaGAGCTGCTCAGATAATGGC +
Preference number: 4 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGQLRGL*SCSDNG
Trigger: GCCATTATCTGAGCAGCTTCAAAGACCCCTGAGCTG...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCAGTGTGCAGGAGAGATaGGATGCTTGGCACATCTCC +
Preference number: 4 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGSVQER*DAWHIS
Trigger: GGAGATGTGCCAAGCATCTCATCTCTCCTGCACACT...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGATGCAGAAGTCCTTCTaGCTAAAGTGTGCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGMQKSF*LKCAGE
Trigger: CTCTCCTGCACACTTTAGTCAGAAGGACTTCTGCAT...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGATAATCTCCAGTCTCTaGGTTAGCACCTTTCCACGT +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGIISSL*VSTFPR
Trigger: ACGTGGAAAGGTGCTAACTCAGAGACTGGAGATTAT...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCCCCTCGTCCTCAAGTTaGAGACCACTGAGCCCAATT +
Preference number: 4 (lower is better)
Translates to: TSGLEVTLENNIPILHLPPSSSS*RPLSPI
Trigger: AATTGGGCTCAGTGGTCTTCAACTTGAGGACGAGGG...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAAGGCTTCAGAGAATTaGAAACCAGCAGGGACGCCA +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDKASEN*KPAGTP
Trigger: TGGCGTCCCTGCTGGTTTTCAATTCTCTGAAGCCTT...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGGAGGACATTCCTCCCTaGTCCTTCTATCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGEDIPP*SFYLSF
Trigger: GAAGGAAAGATAGAAGGATCAGGGAGGAATGTCCTC...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525557.5
CDS-3UTR GCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAACACTTGTCCCTGCTaGCAGGAAAGTAATGCCCAT +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRNTCPC*QESNAH
Trigger: ATGGGCATTACTTTCCTGGCAGCAGGGACAAGTGTT...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AGAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTGCCCCTTTGGAACACTTGTCCCTaGTGCCAGGAAAGTAATGCC +
Preference number: 4 (lower is better)
Translates to: RMSAIMGPKPQQVEVLPLWNTCP*CQESNA
Trigger: GGCATTACTTTCCTGGCAGCAGGGACAAGTGTTCCA...AAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp GCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTTTAACAACCATGGTCTaGAGGCCCCACGGTACACCA +
Preference number: 4 (lower is better)
Translates to: ARQRPRWLFLPVCERTDSLTTMV*RPHGTP
Trigger: TGGTGTACCGTGGGGCCTGCAGACCATGGTTGTTAA...ACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTTAACAACCATGGTCTaGAGGCCCCACGGTACACCA +
Preference number: 4 (lower is better)
Translates to: TSGLEVTLENNIPILHLPLTTMV*RPHGTP
Trigger: TGGTGTACCGTGGGGCCTGCAGACCATGGTTGTTAA...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATGACAGTGGCTGCCTATaGAGGAGAGACCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SGLEVTLENNIPILHLPYDSGCL*RRDLWW
Trigger: CCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTC...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp GCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGCAGGAGAGATGAGATaGTTGGCACATCTCCGTGGT +
Preference number: 4 (lower is better)
Translates to: ARQRPRWLFLPVCERTDSAGEMR*LAHLRG
Trigger: ACCACGGAGATGTGCCAAGCATCTCATCTCTCCTGC...ACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCAACAGGTTGAGGTCTTaGCCCTTCCAAACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETNRLRS*PFQTVA
Trigger: AGCCACAGTTTGGAAGGGGCAAGACCTCAACCTGTT...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp GCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGCTTGGCCTCCCTTCTaGTATGACTGGCCATTGAAC +
Preference number: 4 (lower is better)
Translates to: ARQRPRWLFLPVCERTDSAWPPF*YDWPLN
Trigger: GTTCAATGGCCAGTCATAGCAGAAGGGAGGCCAAGC...ACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCGGGCCATGTGGCCTGTaGCTTGCCATAGCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETGPCGL*LAIAKN
Trigger: ATTTTTAGCTATGGCAAGGCACAGGCCACATGGCCC...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp CCTCTTACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCACCCGGAGCGCCTGGGTaGCGTCTCTGGGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: PLTSSWVVPIHSSVQNISPGAPG*RLWERM
Trigger: CATCCTCTCCCAGAGACGGCACCCAGGCGCTCCGGG...TGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGTAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGCACACGAAGCCGACTTaGTGCGGCAGCATCTCTCGC +
Preference number: 4 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRHTKPT*CGSISR
Trigger: GCGAGAGATGCTGCCGCAGCAAGTCGGCTTCGTGTG...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACTCCACAGGAACCACCTaGTCCTGTGTCTATAGGCAT +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDSTGTT*SCVYRH
Trigger: ATGCCTATAGACACAGGAGCAGGTGGTTCCTGTGGA...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGACATCTTCGCTCAGATaGAGTCTCTCACAGATCTTC +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGTSSLR*SLSQIF
Trigger: GAAGATCTGTGAGAGACTCCATCTGAGCGAAGATGT...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp CCTCTTACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCACAGCAGAGCCCACGATaGTGCCCACCCCGACGTCCC +
Preference number: 4 (lower is better)
Translates to: PLTSSWVVPIHSSVQNISQQSPR*CPPRRP
Trigger: GGGACGTCGGGGTGGGCACCATCGTGGGCTCTGCTG...TGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGTAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp AGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGTGGCTCTGGCGGTGGTaGCTGTGGCGGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLRKGLATGFKLITKFKVWLWRW*LWRRLL
Trigger: CAGCAGCCGCCGCCACAGCCACCACCGCCAGAGCCA...CACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGTGGCTCTGGCGGTGGTaGCTGTGGCGGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQWLWRW*LWRRLL
Trigger: CAGCAGCCGCCGCCACAGCCACCACCGCCAGAGCCA...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp AGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGCTCTGGCTCTGGCGGTaGTGGCTGTGGCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: SLRKGLATGFKLITKFKVLWLWR*WLWRRL
Trigger: CAGCCGCCGCCACAGCCACCACCGCCAGAGCCAGAG...CACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGCACCGGCTCTGGCTCTaGCGGTGGTGGCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQHRLWL*RWWLWR
Trigger: CCGCCACAGCCACCACCGCCAGAGCCAGAGCCGGTG...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGACACGTTGCTTCCTATaGTGTTGGAGACTGCCATGT +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGTRCFL*CWRLPC
Trigger: ACATGGCAGTCTCCAACACCATAGGAAGCAACGTGT...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGCAGCAGCCTGGCCTGTaGCCAGACAAAGACCACGAT +
Preference number: 4 (lower is better)
Translates to: EIPTSVTIFESQEGISYWQQPGL*PDKDHD
Trigger: ATCGTGGTCTTTGTCTGGCCACAGGCCAGGCTGCTG...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATCTTGGCACATCTCCGTaGTTGGCAGCTCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SGLEVTLENNIPILHLPYLGTSP*LAAQGS
Trigger: AGACCCCTGAGCTGCCAACCACGGAGATGTGCCAAG...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTCTTGGCACATCTCCGTaGTTGGCAGCTCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSLGTSP*LAAQGS
Trigger: AGACCCCTGAGCTGCCAACCACGGAGATGTGCCAAG...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCGAATGTCTGCCATCATaGGCCCTAAACCCCAACAGG +
Preference number: 4 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGECLPS*ALNPNR
Trigger: CCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTC...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTCAGCCTCCCATTCTTaGCCTGCCACGTGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: TSGLEVTLENNIPILHLPSASHS*PATCRN
Trigger: GTTTCTACACGTGGCAGGCCAAGAATGGGAGGCTGA...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCATTAAGGTGACAGAGTaGTCCCGAGGGCTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETIKVTE*SRGLWN
Trigger: ATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAAT...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCCCATCAGGGGCCATGTaGCCTGTGCCTTGCCATAGC +
Preference number: 4 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSPSGAM*PVPCHS
Trigger: GCTATGGCAAGGCACAGGCCACATGGCCCCTGATGG...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGCCATCAGGGGCCATGTaGCCTGTGCCTTGCCATAGC +
Preference number: 4 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRPSGAM*PVPCHS
Trigger: GCTATGGCAAGGCACAGGCCACATGGCCCCTGATGG...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp CACAAAACTAGTGTCCCGATTGAGTTTTCTTTATCAACAAGCAAACACAGCAACCTCCTCCTCCAAGTTTaGCGGCGGCCGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: HKTSVPIEFSLSTSKHSNLLLQV*RRPPRL
Trigger: CAGCCGGGGCGGCCGCCGCCAAACTTGGAGGAGGAG...GTTGCTGTGTTTGCTTGTTGATAAAGAAAACTCAATCGGGACACTAGTTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGCTGGTCAGGGAAGCTTaGTGCATTATCAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGLVREA*CIISCL
Trigger: TAAGCAGCTGATAATGCACCAAGCTTCCCTGACCAG...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCCAGTGGGAACAGGTGTaGCTTAAGCCAGCATTTGTC +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETQWEQV*LKPAFV
Trigger: GACAAATGCTGGCTTAAGCCACACCTGTTCCCACTG...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCTGTAATCCAGCACTTTaGGAGGCCGGGGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSCNPAL*EAGVGG
Trigger: TCCGCCCACCCCGGCCTCCCAAAGTGCTGGATTACA...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATCAGCCTGCATCCCCTTaGGCTTTGTGGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SGLEVTLENNIPILHLPYQPASP*ALWICL
Trigger: CAGGCAGATCCACAAAGCCCAAGGGGATGCAGGCTG...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTTCGTGCCTCCCGTTTTaGAGCGGCTTACTGCTCACA +
Preference number: 4 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSSCLPF*SGLLLT
Trigger: TGTGAGCAGTAAGCCGCTTCAAAACGGGAGGCACGA...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATCCAGCCCCCGGCTGTTaGTCTTCACTGTTGATCCAT +
Preference number: 4 (lower is better)
Translates to: SGLEVTLENNIPILHLPYPAPGC*SSLLIH
Trigger: ATGGATCAACAGTGAAGATCAACAGCCGGGGGCTGG...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACATGCAGAAGTCCTTCTaGCTAAAGTGTGCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDMQKSF*LKCAGE
Trigger: CTCTCCTGCACACTTTAGTCAGAAGGACTTCTGCAT...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCATGCAGAAGTCCTTCTaGCTAAAGTGTGCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETMQKSF*LKCAGE
Trigger: CTCTCCTGCACACTTTAGTCAGAAGGACTTCTGCAT...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGTTTGCACCTGCCCTATaGGATCTTGTGCTCACAAAT +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGFAPAL*DLVLTN
Trigger: ATTTGTGAGCACAAGATCTCATAGGGCAGGTGCAAA...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGCTGGAGGTGACACTTaGGAACAACATTCCTATTTT +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGAGGDT*EQHSYF
Trigger: AAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGC...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCATAATCTCCAGTCTCTaGGTTAGCACCTTTCCACGT +
Preference number: 4 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSIISSL*VSTFPR
Trigger: ACGTGGAAAGGTGCTAACTCAGAGACTGGAGATTAT...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp AGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGGCCTGGTGGTGGGGGTaGGGTCCTGTCGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SLRKGLATGFKLITKFKVAWWWG*GPVAGS
Trigger: TGAGCCTGCGACAGGACCTCACCCCCACCACCAGGC...CACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGACTTGGCTATTAAGGTaGCAGAGTGGTCCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: EIPTSVTIFESQEGISYWTWLLR*QSGPEG
Trigger: GCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGT...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGACAGATATTAGGAAATaGCCTGAGGAACCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRTDIRK*PEEPRS
Trigger: ACTCCTGGGTTCCTCAGGTCATTTCCTAATATCTGT...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp ACACCTTCCACCCTAACCACGCTTGACCTGGTGAGGCAAAATTCCAAACCAGAACCACGCTTGACCTGGTaGGGCAAAATTCCAAACCAG +
Preference number: 4 (lower is better)
Translates to: TPSTLTTLDLVRQNSKPEPRLTW*GKIPNQ
Trigger: CTGGTTTGGAATTTTGCCTCACCAGGTCAAGCGTGG...TTCTGGTTTGGAATTTTGCCTCACCAGGTCAAGCGTGGTTAGGGTGGAAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp GCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCGGGAGGCTTCATGCTTaGGGGGCTCACAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: ASRSLSLRKGLATGFKLIGRLHA*GAHRIS
Trigger: GCTGATCCTGTGAGCCCCTCAAGCATGAAGCCTCCC...GATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACACTGCGCGTCTGTCCTaGATGGACTTGGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYTARLS*MDLGNS
Trigger: AGAATTTCCCAAGTCCATTCAGGACAGACGCGCAGT...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCGAATCGCAGGATCTGTaGAGTTCTTGGCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: TSGLEVTLENNIPILHLPESQDL*SSWLSV
Trigger: CACAGACAGCCAAGAACTGCACAGATCCTGCGATTC...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTTTGAAGCGGCTTACTaGTCACACCATTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGFEAAY*SHHWPS
Trigger: ACTCGGCCAATGGTGTGAGCAGTAAGCCGCTTCAAA...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCAACACTTGTCCCTGCTaGCAGGAAAGTAATGCCCAT +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETNTCPC*QESNAH
Trigger: ATGGGCATTACTTTCCTGGCAGCAGGGACAAGTGTT...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACCAATTAGGCTGGCCATaGAGTCTGGAACACTTGTCC +
Preference number: 4 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYQLGWP*SLEHLS
Trigger: GGACAAGTGTTCCAGACTGCATGGCCAGCCTAATTG...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGGACAGTGGCTGCCTATaGAGGAGAGACCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRDSGCL*RRDLWW
Trigger: CCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTC...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGTTCCTATTTTGCACCTaGCCTATGAGATCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGFLFCT*PMRSCA
Trigger: AGCACAAGATCTCATAGGGCAGGTGCAAAATAGGAA...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGGAAGGAGGACAACATTCCTATTTTaGACCTGCCCTATGAGATCT +
Preference number: 4 (lower is better)
Translates to: KERTVAAYAGETCGGGRRTTFLF*TCPMRS
Trigger: AGATCTCATAGGGCAGGTGCAAAATAGGAATGTTGT...CCTCCTTCCCCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAACCAAACACCTCAGTaGCAATGCAAGATGGCATAC +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRNQTPQ*QCKMAY
Trigger: GTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTT...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GCACGTAGACACCCAGCTTCCGGTCCAGTCGCCACTTGTTTAGGTGGATGCCGATCTGATTTTCACACTTaGCTTCAGCTAACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ARRHPASGPVATCLGGCRSDFHT*LQLTRK
Trigger: CTTTCTGGTTAGCTGAAGGCAAGTGTGAAAATCAGA...TCGGCATCCACCTAAACAAGTGGCGACTGGACCGGAAGCTGGGTGTCTACGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525557.5
CDS-3UTR GCA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCAATCTACAGGGGCCCTaGCTTCCCTCTTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGNLQGP*LPSLLI
Trigger: AATCAGCAAAGAGGGAAGGCAGGGCCCCTGTAGATT...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGCCCAAAATCCCAGTCTaGTTGGGGAGTCCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: EIPTSVTIFESQEGISYWPKIPV*LGSPGS
Trigger: AGAACCCGGACTCCCCAAGCAGACTGGGATTTTGGG...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp TTAACCAGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTCCGGGAGGCGGAGCTTaGAGTGAGTGGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: LTSTSDTLSSVQQAMKFVPGGGA*SEWRSR
Trigger: GCGCGATCTCCACTCACTGCAAGCTCCGCCTCCCGG...AACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCATTTCTCCACGTGTCTaGCAGGACACGTTTGCTAGC +
Preference number: 4 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGISPRV*QDTFAS
Trigger: GCTAGCAAACGTGTCCTGCCAGACACGTGGAGAAAT...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCGCTGTCGCTCCTTATTaGAGAACAGATCTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGAVAPY*RTDLWG
Trigger: TCCCCACAGATCTGTTCTCCAATAAGGAGCGACAGC...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCGCTGTCGCTCCTTATTaGAGAACAGATCTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TSGLEVTLENNIPILHLPAVAPY*RTDLWG
Trigger: TCCCCACAGATCTGTTCTCCAATAAGGAGCGACAGC...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGACATCTTCGCTCAGATaGAGTCTCTCACAGATCTTC +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRTSSLR*SLSQIF
Trigger: GAAGATCTGTGAGAGACTCCATCTGAGCGAAGATGT...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATGTCAGACGGACCACCTaGCCAGCAAACAGTCCGCAC +
Preference number: 4 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHVRRTT*PANSPH
Trigger: GTGCGGACTGTTTGCTGGCCAGGTGGTCCGTCTGAC...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCACACGTTGCTTCCTATaGTGTTGGAGACTGCCATGT +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETTRCFL*CWRLPC
Trigger: ACATGGCAGTCTCCAACACCATAGGAAGCAACGTGT...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGCTTGGCACATCTCCGTaGTTGGCAGCTCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRLGTSP*LAAQGS
Trigger: AGACCCCTGAGCTGCCAACCACGGAGATGTGCCAAG...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCCTTGGCACATCTCCGTaGTTGGCAGCTCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSLGTSP*LAAQGS
Trigger: AGACCCCTGAGCTGCCAACCACGGAGATGTGCCAAG...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp AAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGGAAGGAGGGGGCATATAAATAACTaGAACTTTCAACAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: KERTVAAYAGETCGGGRRGHINN*NFQQGG
Trigger: ACCACCCTGTTGAAAGTTCCAGTTATTTATATGCCC...CCTCCTTCCCCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATCTCACTCCCCAAGTGTaGCCAACTTACAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SGLEVTLENNIPILHLPYLTPQV*PTYRGW
Trigger: CCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAG...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GAGACTAAGAGTATTCATTTAGAATCTCAAATGGGTTCTGCTGAGGAAGAGGAGCTCACCCGTCGCCCATaGAGGGAAGGCACGGAAGGC +
Preference number: 4 (lower is better)
Translates to: ETKSIHLESQMGSAEEEELTRRP*REGTEG
Trigger: GCCTTCCGTGCCTTCCCTCCATGGGCGACGGGTGAG...CTCCTCTTCCTCAGCAGAACCCATTTGAGATTCTAAATGAATACTCTTAGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCCAGGCCCGGGGTAGATaGGGGTTGATGGACTTACTG +
Preference number: 4 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSQARGR*GLMDLL
Trigger: CAGTAAGTCCATCAACCCCCATCTACCCCGGGCCTG...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp TACCTTTTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATAGTAATCTCAGCACTCTaGGAGGCCCAGGCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: YLFPYSKPNTSVPMQDGIVISAL*EAQAGG
Trigger: TCCGCCCGCCTGGGCCTCCCAGAGTGCTGAGATTAC...TATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAAAAGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATCTACCCCTGGGCCTaGCTGCATCTGGCTGACAGC +
Preference number: 4 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHIYPWA*LHLADS
Trigger: GCTGTCAGCCAGATGCAGCCAGGCCCAGGGGTAGAT...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CAA 72 bp GGACACAAGAGTCCTCTGATTCCATCTACCTGCTATTaGGTAGGTTCCCTCAGAAACCACACCCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GHKSPLIPSTCY*VGSLRNHTQPA
Trigger: TGCAGGCTGGGTGTGGTTTCTGAGGGAACCTACCAAATAGCAGGTAGATGGAATCAGAGGACTCTTGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCCCTCCAGCTCACTGTTaGCCGGGTTACCGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSPPAHC*PGYRLQ
Trigger: TTGCAAACGGTAACCCGGTCAACAGTGAGCTGGAGG...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTTCACCAGCCACACCATaGTGTAGGAGAACACAGCGA +
Preference number: 4 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSSPATP*CRRTQR
Trigger: TCGCTGTGTTCTCCTACATCATGGTGTGGCTGGTGA...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp CACAAAACTAGTGTCCCGATTGAGTTTTCTTTATCAACAAGCAAACACAGCAACGGATGCCGAGGACGGTaGGAGCGACAGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: HKTSVPIEFSLSTSKHSNGCRGR*ERQSPA
Trigger: TGCTGGGCTCTGTCGCTCTCACCGTCCTCGGCATCC...GTTGCTGTGTTTGCTTGTTGATAAAGAAAACTCAATCGGGACACTAGTTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATAGTGTGCAGGAGAGATaGGATGCTTGGCACATCTCC +
Preference number: 4 (lower is better)
Translates to: SGLEVTLENNIPILHLPYSVQER*DAWHIS
Trigger: GGAGATGTGCCAAGCATCTCATCTCTCCTGCACACT...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACTTTGCACCTGCCCTATaGGATCTTGTGCTCACAAAT +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDFAPAL*DLVLTN
Trigger: ATTTGTGAGCACAAGATCTCATAGGGCAGGTGCAAA...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGATTAACCAGCACTTCTaGCACACTCAGTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRINQHF*HTQFSS
Trigger: TGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAAT...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGACAAAAAGAGAAGCCTaGACTTGGTGTAGCTACGAT +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRTKREA*TWCSYD
Trigger: ATCGTAGCTACACCAAGTTCAGGCTTCTCTTTTTGT...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGCAAGTTGAAGACCACTaGGCCCAATTTCTAGGTAAA +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGQVEDH*AQFLGK
Trigger: TTTACCTAGAAATTGGGCTCAGTGGTCTTCAACTTG...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCACTTGGCTATTAAGGTaGCAGAGTGGTCCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSTWLLR*QSGPEG
Trigger: GCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGT...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGACTTGGCTATTAAGGTaGCAGAGTGGTCCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRTWLLR*QSGPEG
Trigger: GCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGT...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGAACCCAGGAGTCAATaGTATATTGATGAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: QCVKERTVAAYAGETCGGEPRSQ*YIDEVL
Trigger: CAAAACCTCATCAATATATCATTGACTCCTGGGTTC...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACACAGATATTAGGAAATaGCCTGAGGAACCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDTDIRK*PEEPRS
Trigger: ACTCCTGGGTTCCTCAGGTCATTTCCTAATATCTGT...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTAGGATACGTGTGCTCTaGAAGCTACACAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ARQRPRWLFLPVCERTDSRIRVL*KLHKAS
Trigger: TGAAGCCTTGTGTAGCTTTCAGAGCACACGTATCCT...ACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGGGGGTAAGGAGCAGGTaGAAATTCACAAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRGVRSR*KFTRAG
Trigger: GCCTGCCCTTGTGAATTTTCACCTGCTCCTTACCCC...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp GCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCGGCAGGGATGAAAAGTaGGGGCAGAGATGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: ASRSLSLRKGLATGFKLIGRDEK*GQRCPV
Trigger: CACTGGGCATCTCTGCCCTCACTTTTCATCCCTGCC...GATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp GTCTCTGAGTTAGCACCTTTCCACGTTAGTCTCTTACCTTTTTCCCTATTCCAAAGAGCACCAAGGATGTaGAGCAGGACGGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: VSELAPFHVSLLPFSLFQRAPRM*SRTAPC
Trigger: GCACGGAGCCGTCCTGCTGCACATCCTTGGTGCTCT...TTGGAATAGGGAAAAAGGTAAGAGACTAACGTGGAAAGGTGCTAACTCAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCGACCGGGTTACCGTTTaGAATGCTCTTTTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETDRVTV*NALLFD
Trigger: GTCAAACAAAAGAGCATTGCAAACGGTAACCCGGTC...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTTTAACAACCATGGTCTaGAGGCCCCACGGTACACCA +
Preference number: 4 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSLTTMV*RPHGTP
Trigger: TGGTGTACCGTGGGGCCTGCAGACCATGGTTGTTAA...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCACACCTCAGTGCCAATaGAAGATGGCATACAGAGGA +
Preference number: 4 (lower is better)
Translates to: TSGLEVTLENNIPILHLPTPQCQ*KMAYRG
Trigger: TCCTCTGTATGCCATCTTGCATTGGCACTGAGGTGT...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAACCAAACACCTCAGTaGCAATGCAAGATGGCATAC +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDNQTPQ*QCKMAY
Trigger: GTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTT...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGTCAGGGAAGCTTGGTaGATTATCAGCTGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: ARQRPRWLFLPVCERTDSVREAW*IISCLG
Trigger: ACCTAAGCAGCTGATAATGCACCAAGCTTCCCTGAC...ACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATCTGCCACCCAAGAGCTaGCCACAGAGCATTTTCAGA +
Preference number: 4 (lower is better)
Translates to: SGLEVTLENNIPILHLPYLPPKS*PQSIFR
Trigger: TCTGAAAATGCTCTGTGGGCAGCTCTTGGGTGGCAG...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp ACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAATATTCAGCCTCCACCGGCTCTaGCTCTGGCGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TSSWVVPIHSSVQNISIFSLHRL*LWRWWL
Trigger: CAGCCACCACCGCCAGAGCCAGAGCCGGTGGAGGCT...GAATATTGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCACACGTTGCTTCCTATaGTGTTGGAGACTGCCATGT +
Preference number: 4 (lower is better)
Translates to: TSGLEVTLENNIPILHLPTRCFL*CWRLPC
Trigger: ACATGGCAGTCTCCAACACCATAGGAAGCAACGTGT...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGCGCCACTTGTTTAGGTaGATGCCGAGGACGGTGAGA +
Preference number: 4 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRRHLFR*MPRTVR
Trigger: TCTCACCGTCCTCGGCATCCACCTAAACAAGTGGCG...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCCGCCACTTGTTTAGGTaGATGCCGAGGACGGTGAGA +
Preference number: 4 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSRHLFR*MPRTVR
Trigger: TCTCACCGTCCTCGGCATCCACCTAAACAAGTGGCG...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAAGCACAAGAAGATaGCGTAGAGAACCAGCACGT +
Preference number: 4 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYRSTRR*RREPAR
Trigger: ACGTGCTGGTTCTCTACGCCATCTTCTTGTGCTTCT...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCAGAAGCACAAGAAGATaGCGTAGAGAACCAGCACGT +
Preference number: 4 (lower is better)
Translates to: TSGLEVTLENNIPILHLPRSTRR*RREPAR
Trigger: ACGTGCTGGTTCTCTACGCCATCTTCTTGTGCTTCT...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATGAATGTCTGCCATCATaGGCCCTAAACCCCAACAGG +
Preference number: 4 (lower is better)
Translates to: SGLEVTLENNIPILHLPYECLPS*ALNPNR
Trigger: CCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTC...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp AGAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTGCCCCTTCGTGTAGAAACTACGTaGTTCCAGAAGCTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: RMSAIMGPKPQQVEVLPLRVETT*FQKLSS
Trigger: AGAGCTAAGCTTCTGGAACCACGTAGTTTCTACACG...AAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCCTGTGTAGAGAATTCTaGAGTGACAGCAAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SSFQCVKERTVAAYAGETLCREF*SDSKEG
Trigger: GCCTTCTTTGCTGTCACTCCAGAATTCTCTACACAG...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp GTCCTGCCCACGGTGCCCTTAATCACCAGTCTCTCATTGCAGCTGACCCAGAACTGTCCTGAATGGACTTaGGAAATTCTGTGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: VLPTVPLITSLSLQLTQNCPEWT*EILCRE
Trigger: TTCTCTACACAGAATTTCCCAAGTCCATTCAGGACA...GTTCTGGGTCAGCTGCAATGAGAGACTGGTGATTAAGGGCACCGTGGGCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CAA 72 bp TCTCTGAGAGATGGGCTCCTGCTGATGCAATTAGGCTaGCAAATCCCCATAAACAGGGAAGAGCAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: SLRDGLLLMQLG*QIPINREEQVE
Trigger: TTCCACCTGCTCTTCCCTGTTTATGGGGATTTGCAAGCCTAATTGCATCAGCAGGAGCCCATCTCTCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATTCTGTGGGGAACTCGTaGATCGCAGGATCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHSVGNS*IAGSVQ
Trigger: CTGCACAGATCCTGCGATTCACGAGTTCCCCACAGA...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGTCACCAGCCACACCATaGTGTAGGAGAACACAGCGA +
Preference number: 4 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRSPATP*CRRTQR
Trigger: TCGCTGTGTTCTCCTACATCATGGTGTGGCTGGTGA...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGCCTCTGGGCTGGAGGTaGCACTTGAGAACAACATTC +
Preference number: 4 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRPLGWR*HLRTTF
Trigger: GAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGG...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACATAATCTCCAGTCTCTaGGTTAGCACCTTTCCACGT +
Preference number: 4 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYIISSL*VSTFPR
Trigger: ACGTGGAAAGGTGCTAACTCAGAGACTGGAGATTAT...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACATTAACCAGCACTTCTaGCACACTCAGTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDINQHF*HTQFSS
Trigger: TGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAAT...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp CCTGGAAAGATAGCTCCACCCTGGTTGCAGAACAGGAGGGAAAAGCCTCTTCTCATTAACCAGCACTTCTaGCACACTCAGTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PGKIAPPWLQNRREKPLLINQHF*HTQFSS
Trigger: TGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAAT...GAGAAGAGGCTTTTCCCTCCTGTTCTGCAACCAGGGTGGAGCTATCTTTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp ACCACGCTTGACCTGGTGAGGCAAAATTCCAAACCAGAAGTCCACAGGAACCACAACACTTCCTCCTTTTaGAACTCAGGAGGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: TTLDLVRQNSKPEVHRNHNTSSF*NSGGPK
Trigger: TTTAGGGCCTCCTGAGTTTCAAAAGGAGGAAGTGTT...GTGGTTCCTGTGGACTTCTGGTTTGGAATTTTGCCTCACCAGGTCAAGCGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACGGCAGTGTGTGCTTGTaGATGTTTGAGGATTTAACA +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDGSVCL*MFEDLT
Trigger: TGTTAAATCCTCAAACATTCACAAGCACACACTGCC...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGTGGAACACTTGTCCCTaGTGCCAGGAAAGTAATGCC +
Preference number: 4 (lower is better)
Translates to: EIPTSVTIFESQEGISYWWNTCP*CQESNA
Trigger: GGCATTACTTTCCTGGCAGCAGGGACAAGTGTTCCA...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTTGGAACACTTGTCCCTaGTGCCAGGAAAGTAATGCC +
Preference number: 4 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSWNTCP*CQESNA
Trigger: GGCATTACTTTCCTGGCAGCAGGGACAAGTGTTCCA...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGCAATTAGGCTGGCCATaGAGTCTGGAACACTTGTCC +
Preference number: 4 (lower is better)
Translates to: EIPTSVTIFESQEGISYWQLGWP*SLEHLS
Trigger: GGACAAGTGTTCCAGACTGCATGGCCAGCCTAATTG...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGTTAACAACCATGGTCTaGAGGCCCCACGGTACACCA +
Preference number: 4 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRLTTMV*RPHGTP
Trigger: TGGTGTACCGTGGGGCCTGCAGACCATGGTTGTTAA...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp ATATTTTTCTATCTAGTTTTGAGTCAGCCTCCCATTCTTGGCCTGCCACGTGTAGACAGTGGCTGCCTATaGAGGAGAGACCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: IFFYLVLSQPPILGLPRVDSGCL*RRDLWW
Trigger: CCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTC...TACACGTGGCAGGCCAAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATAGAACGGACAGTGGCTaGCTATGCAGGAGAGACCTG +
Preference number: 4 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHRTDSG*LCRRDL
Trigger: CAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCT...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCAACCAAACACCTCAGTaGCAATGCAAGATGGCATAC +
Preference number: 4 (lower is better)
Translates to: TSGLEVTLENNIPILHLPNQTPQ*QCKMAY
Trigger: GTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTT...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCTCTGATTTTCACACTTaGCTTCAGCTAACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSSDFHT*LQLTRK
Trigger: CTTTCTGGTTAGCTGAAGGCAAGTGTGAAAATCAGA...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATACTTGTTTAGGTGGATaGCGAGGACATTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SGLEVTLENNIPILHLPYTCLGG*RGHSSL
Trigger: CAGGGAGGAATGTCCTCGGCATCCACCTAAACAAGT...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525557.5
CDS-3UTR GCA 90 bp ATATTTTTCTATCTAGTTTTGAGTCAGCCTCCCATTCTTGGCCTGCCACGTGTACGTACTCCTGCTAACTaGCCCCAGGGGAGGATGGTT +
Preference number: 4 (lower is better)
Translates to: IFFYLVLSQPPILGLPRVRTPAN*PQGRMV
Trigger: AACCATCCTCCCCTGGGGGCAGTTAGCAGGAGTACG...TACACGTGGCAGGCCAAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTCCATTGAAAGAGGACTaGGCGTCTGTCCTGAATGGA +
Preference number: 4 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSPLKED*ASVLNG
Trigger: TCCATTCAGGACAGACGCGCAGTCCTCTTTCAATGG...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTTGGAGAACAGATCTGTaGGGAACTCGTGAATCGCAG +
Preference number: 4 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSWRTDL*GTRESQ
Trigger: CTGCGATTCACGAGTTCCCCACAGATCTGTTCTCCA...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTCAGCAGAGCCCACGATaGTGCCCACCCCGACGTCCC +
Preference number: 4 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFQQSPR*CPPRRP
Trigger: GGGACGTCGGGGTGGGCACCATCGTGGGCTCTGCTG...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TTAACCAGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGTCAGACGGACCACCTaGCCAGCAAACAGTCCGCAC +
Preference number: 4 (lower is better)
Translates to: LTSTSDTLSSVQQAMKFVVRRTT*PANSPH
Trigger: GTGCGGACTGTTTGCTGGCCAGGTGGTCCGTCTGAC...AACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp ATATTTTTCTATCTAGTTTTGAGTCAGCCTCCCATTCTTGGCCTGCCACGTGTAGCTGGCCATGCAGTCTaGAACACTTGTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IFFYLVLSQPPILGLPRVAGHAV*NTCPCC
Trigger: GCAGCAGGGACAAGTGTTCCAGACTGCATGGCCAGC...TACACGTGGCAGGCCAAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTATTAAGGTGACAGAGTaGTCCCGAGGGCTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSIKVTE*SRGLWN
Trigger: ATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAAT...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCCATCACAGAGCAGTTTaGAGAATCAAAACAGAGACA +
Preference number: 4 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSHHRAV*RIKTET
Trigger: TGTCTCTGTTTTGATTCTCCAAACTGCTCTGTGATG...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGCATCACAGAGCAGTTTaGAGAATCAAAACAGAGACA +
Preference number: 4 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRHHRAV*RIKTET
Trigger: TGTCTCTGTTTTGATTCTCCAAACTGCTCTGTGATG...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGGTTCTTGCCATACTGTaGCTTCTCCTTCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: EIPTSVTIFESQEGISYWVLAIL*LLLHSL
Trigger: GAGGCTGTGAAGGAGAAGCCACAGTATGGCAAGAAC...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525557.5
ENST00000531433.5
CDS-3UTR CCA 90 bp TACCTTTTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATATCGATCAAGGCTTCCTaGGGCTGGATCCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: YLFPYSKPNTSVPMQDGISIKAS*GWIPGT
Trigger: GGTTCCTGGGATCCAGCCCCAGGAAGCCTTGATCGA...TATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAAAAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525557.5
CDS-3UTR CCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGAGTTCAAGACCTACCTaGGGAACACAGCGAGATCCT +
Preference number: 4 (lower is better)
Translates to: EIPTSVTIFESQEGISYWSSRPT*GTQRDP
Trigger: AGGATCTCGCTGTGTTCCCCAGGTAGGTCTTGAACT...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp ACACCTTCCACCCTAACCACGCTTGACCTGGTGAGGCAAAATTCCAAACCAGAAGAAGGCTCTGTTGTTTaGGACATTCCCTTTAGGCAC +
Preference number: 4 (lower is better)
Translates to: TPSTLTTLDLVRQNSKPEEGSVV*DIPFRH
Trigger: GTGCCTAAAGGGAATGTCCCAAACAACAGAGCCTTC...TTCTGGTTTGGAATTTTGCCTCACCAGGTCAAGCGTGGTTAGGGTGGAAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp TACCTTTTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACACCATTGGCCGAGTTaGTCAGTCTCTGCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: YLFPYSKPNTSVPMQDGIHHWPS*SVSAAH
Trigger: ATGAGCGGCAGAGACTGATCAACTCGGCCAATGGTG...TATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAAAAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATTCACCAGCCACACCATaGTGTAGGAGAACACAGCGA +
Preference number: 4 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHSPATP*CRRTQR
Trigger: TCGCTGTGTTCTCCTACATCATGGTGTGGCTGGTGA...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATCTTCCTTCCAGTGTGTaGAAGAACGGACAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHLPSSV*KNGQWL
Trigger: CAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAG...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTATGCAGAAGTCCTTCTaGCTAAAGTGTGCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSMQKSF*LKCAGE
Trigger: CTCTCCTGCACACTTTAGTCAGAAGGACTTCTGCAT...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGTCACCAAGTTTAAAGTaGTGTCTGGTGAATCACAAA +
Preference number: 4 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGSPSLK*CLVNHK
Trigger: TTTGTGATTCACCAGACATCACTTTAAACTTGGTGA...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTACAAAAAGAGAAGCCTaGACTTGGTGTAGCTACGAT +
Preference number: 4 (lower is better)
Translates to: ARQRPRWLFLPVCERTDSTKREA*TWCSYD
Trigger: ATCGTAGCTACACCAAGTTCAGGCTTCTCTTTTTGT...ACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTCTGGCCTGGGAGGGGTaGTGGACTGGTGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFLAWEG*WTGAWP
Trigger: AGGCCAAGCACCAGTCCATCACCCCTCCCAGGCCAG...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACGCATTAGAGAGACCATaGATATTTAGAGCATGGCAT +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDALERP*IFRAWH
Trigger: ATGCCATGCTCTAAATATTCATGGTCTCTCTAATGC...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp CACAAAACTAGTGTCCCGATTGAGTTTTCTTTATCAACAAGCAAACACAGCAACATGGGCACGGTGTGCTaGAAGGAGGACCACCTCACG +
Preference number: 4 (lower is better)
Translates to: HKTSVPIEFSLSTSKHSNMGTVC*KEDHLT
Trigger: CGTGAGGTGGTCCTCCTTTCAGCACACCGTGCCCAT...GTTGCTGTGTTTGCTTGTTGATAAAGAAAACTCAATCGGGACACTAGTTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp AAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTTTGTTCCCATATAACTaGCACAGTGGGGAAGATTTT +
Preference number: 4 (lower is better)
Translates to: KVIPTLTPQVWPTYRGWPLFPYN*HSGEDF
Trigger: AAAATCTTCCCCACTGTGTCAGTTATATGGGAACAA...AGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCGAATCGCAGGATCTGTaGAGTTCTTGGCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSESQDL*SSWLSV
Trigger: CACAGACAGCCAAGAACTGCACAGATCCTGCGATTC...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGAACACTTGTCCCTGCTaGCAGGAAAGTAATGCCCAT +
Preference number: 4 (lower is better)
Translates to: EIPTSVTIFESQEGISYWNTCPC*QESNAH
Trigger: ATGGGCATTACTTTCCTGGCAGCAGGGACAAGTGTT...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACCCCTATGAGATCTTGTaGTCACAAATGACCTCAATT +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDPYEIL*SQMTSI
Trigger: AATTGAGGTCATTTGTGAGCACAAGATCTCATAGGG...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGACACCTCAGTGCCAATaGAAGATGGCATACAGAGGA +
Preference number: 4 (lower is better)
Translates to: EIPTSVTIFESQEGISYWTPQCQ*KMAYRG
Trigger: TCCTCTGTATGCCATCTTGCATTGGCACTGAGGTGT...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCCTGCCAGGGAGTGTGTaGTCTGAAATGGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: ASRSLSLRKGLATGFKLILPGSV*SEMETQ
Trigger: CTGAGTCTCCATTTCAGAGCACACACTCCCTGGCAG...GATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACGTCAGACGGACCACCTaGCCAGCAAACAGTCCGCAC +
Preference number: 4 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNVRRTT*PANSPH
Trigger: GTGCGGACTGTTTGCTGGCCAGGTGGTCCGTCTGAC...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp CCTCTTACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAGCTGGCCATGCAGTCTaGAACACTTGTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PLTSSWVVPIHSSVQNISAGHAV*NTCPCC
Trigger: GCAGCAGGGACAAGTGTTCCAGACTGCATGGCCAGC...TGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGTAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTAGAAGCACAAGAAGATaGCGTAGAGAACCAGCACGT +
Preference number: 4 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSRSTRR*RREPAR
Trigger: ACGTGCTGGTTCTCTACGCCATCTTCTTGTGCTTCT...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATAGACAAAGACCACGATaGCTCTTCCTTCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SGLEVTLENNIPILHLPYRQRPR*LFLPVC
Trigger: ACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CCA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCAGTGCCAATGCAAGATaGCATACAGAGGATTTGTGT +
Preference number: 4 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGSANAR*HTEDLC
Trigger: ACACAAATCCTCTGTATGCCATCTTGCATTGGCACT...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACCCTCTTACATCATCATaGGTAGTTCCCATACATTCA +
Preference number: 4 (lower is better)
Translates to: VARQRPRWLFLPVCERTDPLTSS*VVPIHS
Trigger: TGAATGTATGGGAACTACCCATGATGATGTAAGAGG...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp ACACCTTCCACCCTAACCACGCTTGACCTGGTGAGGCAAAATTCCAAACCAGAAAGGTTTTCAAGATACTaGACACCTTCCACCCTAACC +
Preference number: 4 (lower is better)
Translates to: TPSTLTTLDLVRQNSKPERFSRY*TPSTLT
Trigger: GGTTAGGGTGGAAGGTGTCCAGTATCTTGAAAACCT...TTCTGGTTTGGAATTTTGCCTCACCAGGTCAAGCGTGGTTAGGGTGGAAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp GAGACTAAGAGTATTCATTTAGAATCTCAAATGGGTTCTGCTGAGGAAGAGGAGCCCAGGAACGGCCTTTaGTCAGGGTCTGTAGGACTG +
Preference number: 4 (lower is better)
Translates to: ETKSIHLESQMGSAEEEEPRNGL*SGSVGL
Trigger: CAGTCCTACAGACCCTGACCAAAGGCCGTTCCTGGG...CTCCTCTTCCTCAGCAGAACCCATTTGAGATTCTAAATGAATACTCTTAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGCTAAAACCTCTCAGCTaGCTTCCCTGGAAAGATAGC +
Preference number: 4 (lower is better)
Translates to: EIPTSVTIFESQEGISYWLKPLS*LPWKDS
Trigger: GCTATCTTTCCAGGGAAGCCAGCTGAGAGGTTTTAG...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATCGCGTCTGTCCTGAATaGACTTGGGAAATTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SGLEVTLENNIPILHLPYRVCPE*TWEILC
Trigger: ACACAGAATTTCCCAAGTCCATTCAGGACAGACGCG...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp GAGACTAAGAGTATTCATTTAGAATCTCAAATGGGTTCTGCTGAGGAAGAGGAGCACCATTGGCCGAGTTaGTCAGTCTCTGCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: ETKSIHLESQMGSAEEEEHHWPS*SVSAAH
Trigger: ATGAGCGGCAGAGACTGATCAACTCGGCCAATGGTG...CTCCTCTTCCTCAGCAGAACCCATTTGAGATTCTAAATGAATACTCTTAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp ATATTTTTCTATCTAGTTTTGAGTCAGCCTCCCATTCTTGGCCTGCCACGTGTACAGCTCAGGGGTCTTTaGAGCTGCTCAGATAATGGC +
Preference number: 4 (lower is better)
Translates to: IFFYLVLSQPPILGLPRVQLRGL*SCSDNG
Trigger: GCCATTATCTGAGCAGCTTCAAAGACCCCTGAGCTG...TACACGTGGCAGGCCAAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATAACACTTCCTCCTTTTaGAACTCAGGAGGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: SGLEVTLENNIPILHLPYNTSSF*NSGGPK
Trigger: TTTAGGGCCTCCTGAGTTTCAAAAGGAGGAAGTGTT...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp ATATTTTTCTATCTAGTTTTGAGTCAGCCTCCCATTCTTGGCCTGCCACGTGTACCCTCGTCCTCAAGTTaGAGACCACTGAGCCCAATT +
Preference number: 4 (lower is better)
Translates to: IFFYLVLSQPPILGLPRVPSSSS*RPLSPI
Trigger: AATTGGGCTCAGTGGTCTTCAACTTGAGGACGAGGG...TACACGTGGCAGGCCAAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCAGGATACGTGTGCTCTaGAAGCTACACAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSRIRVL*KLHKAS
Trigger: TGAAGCCTTGTGTAGCTTTCAGAGCACACGTATCCT...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TACCTTTTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATAAAAAGCCTCTTCTCCTaGTTCCAGGTGGGCACCCAT +
Preference number: 4 (lower is better)
Translates to: YLFPYSKPNTSVPMQDGIKSLFS*FQVGTH
Trigger: ATGGGTGCCCACCTGGAATCAGGAGAAGAGGCTTTT...TATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAAAAGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATTCCTGGCTAACACGGTaGAACCCTGTCTGTACCAAA +
Preference number: 4 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHSWLTR*NPVCTK
Trigger: TTTGGTACAGACAGGGTTTCACCGTGTTAGCCAGGA...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTAGAGCACCAAGGATGTaGAGCAGGACGGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFRAPRM*SRTAPC
Trigger: GCACGGAGCCGTCCTGCTGCACATCCTTGGTGCTCT...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GTCTCTGAGTTAGCACCTTTCCACGTTAGTCTCTTACCTTTTTCCCTATTCCAATATGGTGTTGGAGACTaGCATGTCCCCAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VSELAPFHVSLLPFSLFQYGVGD*HVPKAL
Trigger: CAAGGCCTTGGGGACATGGCAGTCTCCAACACCATA...TTGGAATAGGGAAAAAGGTAAGAGACTAACGTGGAAAGGTGCTAACTCAGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp AGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGGACAGTGGCTGCCTATaGAGGAGAGACCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SLRKGLATGFKLITKFKVDSGCL*RRDLWW
Trigger: CCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTC...CACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp TTAACCAGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTAGAACGGACAGTGGCTaGCTATGCAGGAGAGACCTG +
Preference number: 4 (lower is better)
Translates to: LTSTSDTLSSVQQAMKFVRTDSG*LCRRDL
Trigger: CAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCT...AACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTCCCTATGAGATCTTGTaGTCACAAATGACCTCAATT +
Preference number: 4 (lower is better)
Translates to: ARQRPRWLFLPVCERTDSPYEIL*SQMTSI
Trigger: AATTGAGGTCATTTGTGAGCACAAGATCTCATAGGG...ACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACCCCTATGAGATCTTGTaGTCACAAATGACCTCAATT +
Preference number: 4 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYPYEIL*SQMTSI
Trigger: AATTGAGGTCATTTGTGAGCACAAGATCTCATAGGG...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCCCCTATGAGATCTTGTaGTCACAAATGACCTCAATT +
Preference number: 4 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGPYEIL*SQMTSI
Trigger: AATTGAGGTCATTTGTGAGCACAAGATCTCATAGGG...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCACAACATTCCTATTTTaGACCTGCCCTATGAGATCT +
Preference number: 4 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGTTFLF*TCPMRS
Trigger: AGATCTCATAGGGCAGGTGCAAAATAGGAATGTTGT...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR GCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATAATCTACAGGGGCCCTaGCTTCCCTCTTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHNLQGP*LPSLLI
Trigger: AATCAGCAAAGAGGGAAGGCAGGGCCCCTGTAGATT...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GAGACTAAGAGTATTCATTTAGAATCTCAAATGGGTTCTGCTGAGGAAGAGGAGCCAAGGGAGGCTTCATaGTTGAGGGGCTCACAGGAT +
Preference number: 4 (lower is better)
Translates to: ETKSIHLESQMGSAEEEEPREAS*LRGSQD
Trigger: ATCCTGTGAGCCCCTCAAGCATGAAGCCTCCCTTGG...CTCCTCTTCCTCAGCAGAACCCATTTGAGATTCTAAATGAATACTCTTAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp GCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCGCTGTCGCTCCTTATTaGAGAACAGATCTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: ASRSLSLRKGLATGFKLIAVAPY*RTDLWG
Trigger: TCCCCACAGATCTGTTCTCCAATAAGGAGCGACAGC...GATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATGCTGGCCATGCAGTCTaGAACACTTGTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNAGHAV*NTCPCC
Trigger: GCAGCAGGGACAAGTGTTCCAGACTGCATGGCCAGC...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp CCTCTTACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCACGCCACTTGTTTAGGTaGATGCCGAGGACGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PLTSSWVVPIHSSVQNISRHLFR*MPRTVR
Trigger: TCTCACCGTCCTCGGCATCCACCTAAACAAGTGGCG...TGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGTAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTCGTGTAGAAACTACGTaGTTCCAGAAGCTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSRVETT*FQKLSS
Trigger: AGAGCTAAGCTTCTGGAACCACGTAGTTTCTACACG...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCCCTCTTACATCATCATaGGTAGTTCCCATACATTCA +
Preference number: 4 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGPLTSS*VVPIHS
Trigger: TGAATGTATGGGAACTACCCATGATGATGTAAGAGG...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGCCAACTTACAGAGGCTaGCCTGGGAGGGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQPTYRG*PGRGDG
Trigger: TCCATCACCCCTCCCAGGCCAGCCTCTGTAAGTTGG...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACCCAACTTACAGAGGCTaGCCTGGGAGGGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNPTYRG*PGRGDG
Trigger: TCCATCACCCCTCCCAGGCCAGCCTCTGTAAGTTGG...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp AGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGGAGGCCAGCAGACTGTaGGTAACAGGAAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: SLRKGLATGFKLITKFKVEASRL*VTGRMG
Trigger: CCCCATCCTTCCTGTTACCCACAGTCTGCTGGCCTC...CACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTTTCACAAGGGCAGGCTaGGCGTGGTGGCTCACACCT +
Preference number: 4 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFFTRAG*AWWLTP
Trigger: AGGTGTGAGCCACCACGCCCAGCCTGCCCTTGTGAA...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp GCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCTGTGGATATGCCCTTTaGGGAACAGCTCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASRSLSLRKGLATGFKLICGYAL*GTALCS
Trigger: GCTGCAAAGAGCTGTTCCCCAAAGGGCATATCCACA...GATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CAA 72 bp GGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTaGCACCTGCCCTATGAGATCTTGTGCTCACAAATG +
Preference number: 4 (lower is better)
Translates to: GLEVTLENNIPI*HLPYEILCSQM
Trigger: CATTTGTGAGCACAAGATCTCATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR TCA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGCACCATTGGCCGAGTTaGTCAGTCTCTGCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQHHWPS*SVSAAH
Trigger: ATGAGCGGCAGAGACTGATCAACTCGGCCAATGGTG...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATTCGTGCCTCCCGTTTTaGAGCGGCTTACTGCTCACA +
Preference number: 4 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNSCLPF*SGLLLT
Trigger: TGTGAGCAGTAAGCCGCTTCAAAACGGGAGGCACGA...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATCCAGCCCCCGGCTGTTaGTCTTCACTGTTGATCCAT +
Preference number: 4 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNPAPGC*SSLLIH
Trigger: ATGGATCAACAGTGAAGATCAACAGCCGGGGGCTGG...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TTAACCAGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTCCTCTGGGCTGGAGGTaGCACTTGAGAACAACATTC +
Preference number: 4 (lower is better)
Translates to: LTSTSDTLSSVQQAMKFVPLGWR*HLRTTF
Trigger: GAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGG...AACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGATTAACCAGCACTTCTaGCACACTCAGTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: EIPTSVTIFESQEGISYWINQHF*HTQFSS
Trigger: TGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAAT...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATACAAAAAGAGAAGCCTaGACTTGGTGTAGCTACGAT +
Preference number: 4 (lower is better)
Translates to: SGLEVTLENNIPILHLPYTKREA*TWCSYD
Trigger: ATCGTAGCTACACCAAGTTCAGGCTTCTCTTTTTGT...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATCAAGTTGAAGACCACTaGGCCCAATTTCTAGGTAAA +
Preference number: 4 (lower is better)
Translates to: SGLEVTLENNIPILHLPYQVEDH*AQFLGK
Trigger: TTTACCTAGAAATTGGGCTCAGTGGTCTTCAACTTG...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp ATATTTTTCTATCTAGTTTTGAGTCAGCCTCCCATTCTTGGCCTGCCACGTGTATTAGAAACATGCAGGTaGAAGACAACCCGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: IFFYLVLSQPPILGLPRVLETCR*KTTRAP
Trigger: AGGGGCACGGGTTGTCTTTCACCTGCATGTTTCTAA...TACACGTGGCAGGCCAAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp TACCTTTTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATATTTGAAGCGGCTTACTaGTCACACCATTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: YLFPYSKPNTSVPMQDGIFEAAY*SHHWPS
Trigger: ACTCGGCCAATGGTGTGAGCAGTAAGCCGCTTCAAA...TATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAAAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GAGACTAAGAGTATTCATTTAGAATCTCAAATGGGTTCTGCTGAGGAAGAGGAGGCAGGAGAGATGAGATaGTTGGCACATCTCCGTGGT +
Preference number: 4 (lower is better)
Translates to: ETKSIHLESQMGSAEEEEAGEMR*LAHLRG
Trigger: ACCACGGAGATGTGCCAAGCATCTCATCTCTCCTGC...CTCCTCTTCCTCAGCAGAACCCATTTGAGATTCTAAATGAATACTCTTAGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp AGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGCCTGTCGCAGGCTCATaGAACAGGGAACTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SLRKGLATGFKLITKFKVPVAGS*NRELQG
Trigger: TCCCTGAAGTTCCCTGTTGCATGAGCCTGCGACAGG...CACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTTTTTGTGCCCCAAGCTaGCGAAGAGGCCGGACGCAC +
Preference number: 4 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFFCAPS*RRGRTH
Trigger: GTGCGTCCGGCCTCTTCGGCAGCTTGGGGCACAAAA...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp TTAACCAGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTTTCAGCTCTCAGAGATaGCACCCGTGGCCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: LTSTSDTLSSVQQAMKFVFSSQR*HPWPSN
Trigger: ATTTGAGGGCCACGGGTGGCATCTCTGAGAGCTGAA...AACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp AGAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTGCCCCTTAGGGTACTGACTCTCTaGAGGATTAAGAATTTTATT +
Preference number: 4 (lower is better)
Translates to: RMSAIMGPKPQQVEVLPLRVLTL*RIKNFI
Trigger: AATAAAATTCTTAATCCTGCAGAGAGTCAGTACCCT...AAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp GCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCAGAAGCACAAGAAGATaGCGTAGAGAACCAGCACGT +
Preference number: 4 (lower is better)
Translates to: ASRSLSLRKGLATGFKLIRSTRR*RREPAR
Trigger: ACGTGCTGGTTCTCTACGCCATCTTCTTGTGCTTCT...GATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATAGACAAAGACCACGATaGCTCTTCCTTCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHRQRPR*LFLPVC
Trigger: ACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp ACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAATATTCCAGCAGCCTGGCCTGTaGCCAGACAAAGACCACGAT +
Preference number: 4 (lower is better)
Translates to: TSSWVVPIHSSVQNISIFQQPGL*PDKDHD
Trigger: ATCGTGGTCTTTGTCTGGCCACAGGCCAGGCTGCTG...GAATATTGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp ACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAATATTCCCAACTTACAGAGGCTaGCCTGGGAGGGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: TSSWVVPIHSSVQNISIFPTYRG*PGRGDG
Trigger: TCCATCACCCCTCCCAGGCCAGCCTCTGTAAGTTGG...GAATATTGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TACCTTTTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATAGGGTTCTCTGAGAGATaGGCTCCTGCTGATGCAATT +
Preference number: 4 (lower is better)
Translates to: YLFPYSKPNTSVPMQDGIGFSER*APADAI
Trigger: AATTGCATCAGCAGGAGCCCATCTCTCAGAGAACCC...TATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAAAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp ACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAATATTCCAGAGATGCCACCCGTaGCCCTCAAATCCTGGTACC +
Preference number: 4 (lower is better)
Translates to: TSSWVVPIHSSVQNISIFQRCHP*PSNPGT
Trigger: GGTACCAGGATTTGAGGGCCACGGGTGGCATCTCTG...GAATATTGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTTCCTGTATCTACCCCTaGGCCTGGCTGCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFSCIYP*AWLHLA
Trigger: AGCCAGATGCAGCCAGGCCCAGGGGTAGATACAGGA...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CAA 72 bp GGGCACAGTCAGAAATTCCAACCAGCGTCACGATCTTaGAGTCTCAGGAAGGGATTAGCTACTGGATTTAAA +
Preference number: 4 (lower is better)
Translates to: GHSQKFQPASRS*SLRKGLATGFK
Trigger: TTTAAATCCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTCTGACTGTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
3UTR CAA 72 bp CCCGGCCTAAAGCTGAGCACAAAACTAGTGTCCCGATaGAGTTTTCTTTATCAACAAGCAAACACAGCAACC +
Preference number: 4 (lower is better)
Translates to: PGLKLSTKLVSR*SFLYQQANTAT
Trigger: GGTTGCTGTGTTTGCTTGTTGATAAAGAAAACTCAATCGGGACACTAGTTTTGTGCTCAGCTTTAGGCCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp ACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAATATTCCCTCCAGCTCACTGTTaGCCGGGTTACCGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: TSSWVVPIHSSVQNISIFPPAHC*PGYRLQ
Trigger: TTGCAAACGGTAACCCGGTCAACAGTGAGCTGGAGG...GAATATTGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTCACCATTGGCCGAGTTaGTCAGTCTCTGCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFHHWPS*SVSAAH
Trigger: ATGAGCGGCAGAGACTGATCAACTCGGCCAATGGTG...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTCACCAGCCACACCATaGTGTAGGAGAACACAGCGA +
Preference number: 4 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNSPATP*CRRTQR
Trigger: TCGCTGTGTTCTCCTACATCATGGTGTGGCTGGTGA...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTCCAGCCCCCGGCTGTTaGTCTTCACTGTTGATCCAT +
Preference number: 4 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFPAPGC*SSLLIH
Trigger: ATGGATCAACAGTGAAGATCAACAGCCGGGGGCTGG...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGCAAGTTGAAGACCACTaGGCCCAATTTCTAGGTAAA +
Preference number: 4 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRQVEDH*AQFLGK
Trigger: TTTACCTAGAAATTGGGCTCAGTGGTCTTCAACTTG...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCCAAGTTGAAGACCACTaGGCCCAATTTCTAGGTAAA +
Preference number: 4 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSQVEDH*AQFLGK
Trigger: TTTACCTAGAAATTGGGCTCAGTGGTCTTCAACTTG...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACGCCTCCCTTCTGCTATaGCTGGCCATTGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNASLLL*LAIELE
Trigger: CTCTAGTTCAATGGCCAGTCATAGCAGAAGGGAGGC...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGGCCTCCCTTCTGCTATaGCTGGCCATTGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQASLLL*LAIELE
Trigger: CTCTAGTTCAATGGCCAGTCATAGCAGAAGGGAGGC...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TTAACCAGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTAAGGCTTCAGAGAATTaGAAACCAGCAGGGACGCCA +
Preference number: 4 (lower is better)
Translates to: LTSTSDTLSSVQQAMKFVKASEN*KPAGTP
Trigger: TGGCGTCCCTGCTGGTTTTCAATTCTCTGAAGCCTT...AACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACCTGCTTCTCAACTGCTaGATCCCAGGGGGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNLLLNC*IPGGKF
Trigger: GAACTTTCCCCCTGGGATTCAGCAGTTGAGAAGCAG...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTAGCAGGACGGCTCCGTaGTGTCGCTCCTTATTGGAG +
Preference number: 4 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFSRTAP*CRSLLE
Trigger: CTCCAATAAGGAGCGACAGCACGGAGCCGTCCTGCT...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGATGTCTGGTGAATCACAAGGCTTCTCCTTCACTTaGCCCAGCAATGGCACGGAA +
Preference number: 4 (lower is better)
Translates to: ATGFKLITKFKVMSGESQGFSFT*PSNGTE
Trigger: TTCCGTGCCATTGCTGGGGCAAGTGAAGGAGAAGCC...TTGTGATTCACCAGACATCACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393265.6
ENST00000532405.6
CDS-3UTR GCA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTCACCACGGGGTTCTTaGCATACTGTGGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNSPRGS*HTVASP
Trigger: AGGAGAAGCCACAGTATGGCAAGAACCCCGTGGTGA...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGTCACCACGGGGTTCTTaGCATACTGTGGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQSPRGS*HTVASP
Trigger: AGGAGAAGCCACAGTATGGCAAGAACCCCGTGGTGA...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGTATGGTGTTGGAGACTaGCATGTCCCCAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQYGVGD*HVPKAL
Trigger: CAAGGCCTTGGGGACATGGCAGTCTCCAACACCATA...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp ACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAATATTCCCTGTCGCAGGCTCATaGAACAGGGAACTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: TSSWVVPIHSSVQNISIFPVAGS*NRELQG
Trigger: TCCCTGAAGTTCCCTGTTGCATGAGCCTGCGACAGG...GAATATTGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGGCTTGGCCTCCCTTCTaGTATGACTGGCCATTGAAC +
Preference number: 4 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQAWPPF*YDWPLN
Trigger: GTTCAATGGCCAGTCATAGCAGAAGGGAGGCCAAGC...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp CCTCTTACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAGGGCCATGTGGCCTGTaGCTTGCCATAGCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: PLTSSWVVPIHSSVQNISGPCGL*LAIAKN
Trigger: ATTTTTAGCTATGGCAAGGCACAGGCCACATGGCCC...TGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGTAAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TACCTTTTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATAACACGTTGCTTCCTATaGTGTTGGAGACTGCCATGT +
Preference number: 4 (lower is better)
Translates to: YLFPYSKPNTSVPMQDGITRCFL*CWRLPC
Trigger: ACATGGCAGTCTCCAACACCATAGGAAGCAACGTGT...TATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAAAAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATGCCCCTTCCAAACTGTaGCTGCTTCCAGCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNAPSKL*LLPAKV
Trigger: GACTTTTGCTGGAAGCAGCCACAGTTTGGAAGGGGC...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACGCCCCTTCCAAACTGTaGCTGCTTCCAGCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNAPSKL*LLPAKV
Trigger: GACTTTTGCTGGAAGCAGCCACAGTTTGGAAGGGGC...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACGAATGTCTGCCATCATaGGCCCTAAACCCCAACAGG +
Preference number: 4 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNECLPS*ALNPNR
Trigger: CCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTC...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATGAATGTCTGCCATCATaGGCCCTAAACCCCAACAGG +
Preference number: 4 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNECLPS*ALNPNR
Trigger: CCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTC...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGGGGCATATAAATAACTaGAACTTTCAACAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: EIPTSVTIFESQEGISYWGHINN*NFQQGG
Trigger: ACCACCCTGTTGAAAGTTCCAGTTATTTATATGCCC...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp AGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGTCAGCCTCCCATTCTTaGCCTGCCACGTGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: SLRKGLATGFKLITKFKVSASHS*PATCRN
Trigger: GTTTCTACACGTGGCAGGCCAAGAATGGGAGGCTGA...CACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp CACAAAACTAGTGTCCCGATTGAGTTTTCTTTATCAACAAGCAAACACAGCAACGGAGGATGGTTCCCATaGAAATCACGTCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: HKTSVPIEFSLSTSKHSNGGWFP*KSRLEG
Trigger: GCCCTCAAGACGTGATTTCCATGGGAACCATCCTCC...GTTGCTGTGTTTGCTTGTTGATAAAGAAAACTCAATCGGGACACTAGTTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTTCTCCTGATTCCAGGTaGGCACCCATTTCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFSPDSR*APISLR
Trigger: GCGCAAGGAAATGGGTGCCCACCTGGAATCAGGAGA...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
3UTR CAA 72 bp GTAGAGAATTCTGGAGTGACAGCAAAGAAGGCTCTGTaGTTTGGGACATTCCCTTTAGGCACAAAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: VENSGVTAKKAL*FGTFPLGTKVD
Trigger: ATCTACCTTTGTGCCTAAAGGGAATGTCCCAAACAACAGAGCCTTCTTTGCTGTCACTCCAGAATTCTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTCCTCCAGCTCACTGTTaGCCGGGTTACCGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFPPAHC*PGYRLQ
Trigger: TTGCAAACGGTAACCCGGTCAACAGTGAGCTGGAGG...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCGCTGGAGGTGACACTTaGGAACAACATTCCTATTTT +
Preference number: 4 (lower is better)
Translates to: ASRSLSLRKGLATGFKLIAGGDT*EQHSYF
Trigger: AAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGC...GATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GTCTCTGAGTTAGCACCTTTCCACGTTAGTCTCTTACCTTTTTCCCTATTCCAAATAATCTCCAGTCTCTaGGTTAGCACCTTTCCACGT +
Preference number: 4 (lower is better)
Translates to: VSELAPFHVSLLPFSLFQIISSL*VSTFPR
Trigger: ACGTGGAAAGGTGCTAACTCAGAGACTGGAGATTAT...TTGGAATAGGGAAAAAGGTAAGAGACTAACGTGGAAAGGTGCTAACTCAGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGTCACCAAGTTTAAAGTaGTGTCTGGTGAATCACAAA +
Preference number: 4 (lower is better)
Translates to: EIPTSVTIFESQEGISYWSPSLK*CLVNHK
Trigger: TTTGTGATTCACCAGACATCACTTTAAACTTGGTGA...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGAAGGCTTCAGAGAATTaGAAACCAGCAGGGACGCCA +
Preference number: 4 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQKASEN*KPAGTP
Trigger: TGGCGTCCCTGCTGGTTTTCAATTCTCTGAAGCCTT...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGATGTCTGGTGAATCACAACTTAGAGGGCAGGGATaGAAAGTGAGGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: ATGFKLITKFKVMSGESQLRGQG*KVRAEM
Trigger: CATCTCTGCCCTCACTTTTCATCCCTGCCCTCTAAG...TTGTGATTCACCAGACATCACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp ACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAATATTCCTGGCTGCATCTGGCTaGCAGCCTTTTTCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: TSSWVVPIHSSVQNISIFLAASG*QPFSSL
Trigger: TAGAGAGGAAAAAGGCTGTCAGCCAGATGCAGCCAG...GAATATTGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACCAATTAGGCTGGCCATaGAGTCTGGAACACTTGTCC +
Preference number: 4 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNQLGWP*SLEHLS
Trigger: GGACAAGTGTTCCAGACTGCATGGCCAGCCTAATTG...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp CACAAAACTAGTGTCCCGATTGAGTTTTCTTTATCAACAAGCAAACACAGCAACCAATTAGGCTGGCCATaGAGTCTGGAACACTTGTCC +
Preference number: 4 (lower is better)
Translates to: HKTSVPIEFSLSTSKHSNQLGWP*SLEHLS
Trigger: GGACAAGTGTTCCAGACTGCATGGCCAGCCTAATTG...GTTGCTGTGTTTGCTTGTTGATAAAGAAAACTCAATCGGGACACTAGTTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp ACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAATATTCGCAGGAGAGATGAGATaGTTGGCACATCTCCGTGGT +
Preference number: 4 (lower is better)
Translates to: TSSWVVPIHSSVQNISIFAGEMR*LAHLRG
Trigger: ACCACGGAGATGTGCCAAGCATCTCATCTCTCCTGC...GAATATTGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp CCTCTTACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAACACCTCAGTGCCAATaGAAGATGGCATACAGAGGA +
Preference number: 4 (lower is better)
Translates to: PLTSSWVVPIHSSVQNISTPQCQ*KMAYRG
Trigger: TCCTCTGTATGCCATCTTGCATTGGCACTGAGGTGT...TGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGTAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACAATCTACAGGGGCCCTaGCTTCCCTCTTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNNLQGP*LPSLLI
Trigger: AATCAGCAAAGAGGGAAGGCAGGGCCCCTGTAGATT...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATGGGCCATGTGGCCTGTaGCTTGCCATAGCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNGPCGL*LAIAKN
Trigger: ATTTTTAGCTATGGCAAGGCACAGGCCACATGGCCC...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTAAACCACACCCAGCCTaGATCCCCTTGGGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFKPHPA*IPLGFV
Trigger: CACAAAGCCCAAGGGGATGCAGGCTGGGTGTGGTTT...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp TACCTTTTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACTGATTCCATCTACCTaGTATTTGGTAGGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: YLFPYSKPNTSVPMQDGILIPST*YLVGSL
Trigger: GAGGGAACCTACCAAATAGCAGGTAGATGGAATCAG...TATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAAAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGCATCACAGAGCAGTTTaGAGAATCAAAACAGAGACA +
Preference number: 4 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRHHRAV*RIKTET
Trigger: TGTCTCTGTTTTGATTCTCCAAACTGCTCTGTGATG...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TTAACCAGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTAAAACCTGTACCCTGTaGATATGCCCTTTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: LTSTSDTLSSVQQAMKFVKTCTL*ICPLGN
Trigger: GTTCCCCAAAGGGCATATCCACAGGGTACAGGTTTT...AACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp ATATTTTTCTATCTAGTTTTGAGTCAGCCTCCCATTCTTGGCCTGCCACGTGTAAGAGACTATGGCACCTaGGAGCCATTTGTCATTGAA +
Preference number: 4 (lower is better)
Translates to: IFFYLVLSQPPILGLPRVRDYGT*EPFVIE
Trigger: TTCAATGACAAATGGCTCCCAGGTGCCATAGTCTCT...TACACGTGGCAGGCCAAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATGTGTGTGCTCTGAAATaGAGACTCAGCCTCACAGAC +
Preference number: 4 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNVCALK*RLSLTD
Trigger: GTCTGTGAGGCTGAGTCTCCATTTCAGAGCACACAC...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTCAGCTCAGGGGTCTTTaGAGCTGCTCAGATAATGGC +
Preference number: 4 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFQLRGL*SCSDNG
Trigger: GCCATTATCTGAGCAGCTTCAAAGACCCCTGAGCTG...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACATGCAGAAGTCCTTCTaGCTAAAGTGTGCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNMQKSF*LKCAGE
Trigger: CTCTCCTGCACACTTTAGTCAGAAGGACTTCTGCAT...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp CCTCTTACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAAACACTTCCTCCTTTTaGAACTCAGGAGGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: PLTSSWVVPIHSSVQNISNTSSF*NSGGPK
Trigger: TTTAGGGCCTCCTGAGTTTCAAAAGGAGGAAGTGTT...TGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGTAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp CCTCTTACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAACAGATATTAGGAAATaGCCTGAGGAACCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PLTSSWVVPIHSSVQNISTDIRK*PEEPRS
Trigger: ACTCCTGGGTTCCTCAGGTCATTTCCTAATATCTGT...TGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGTAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp CACAAAACTAGTGTCCCGATTGAGTTTTCTTTATCAACAAGCAAACACAGCAACGCCTGGTCAGCATGGTaGAACTCCTTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: HKTSVPIEFSLSTSKHSNAWSAW*NSFSTK
Trigger: TTTAGTAGAGAAGGAGTTTCACCATGCTGACCAGGC...GTTGCTGTGTTTGCTTGTTGATAAAGAAAACTCAATCGGGACACTAGTTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTGAATCGCAGGATCTGTaGAGTTCTTGGCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFESQDL*SSWLSV
Trigger: CACAGACAGCCAAGAACTGCACAGATCCTGCGATTC...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTTTTGAAGCGGCTTACTaGTCACACCATTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFFEAAY*SHHWPS
Trigger: ACTCGGCCAATGGTGTGAGCAGTAAGCCGCTTCAAA...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATAACACTTGTCCCTGCTaGCAGGAAAGTAATGCCCAT +
Preference number: 4 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNNTCPC*QESNAH
Trigger: ATGGGCATTACTTTCCTGGCAGCAGGGACAAGTGTT...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp ATATTTTTCTATCTAGTTTTGAGTCAGCCTCCCATTCTTGGCCTGCCACGTGTATTCCTATTTTGCACCTaGCCTATGAGATCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: IFFYLVLSQPPILGLPRVFLFCT*PMRSCA
Trigger: AGCACAAGATCTCATAGGGCAGGTGCAAAATAGGAA...TACACGTGGCAGGCCAAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GTCTCTGAGTTAGCACCTTTCCACGTTAGTCTCTTACCTTTTTCCCTATTCCAATTCCTATTTTGCACCTaGCCTATGAGATCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: VSELAPFHVSLLPFSLFQFLFCT*PMRSCA
Trigger: AGCACAAGATCTCATAGGGCAGGTGCAAAATAGGAA...TTGGAATAGGGAAAAAGGTAAGAGACTAACGTGGAAAGGTGCTAACTCAGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGATGTCTGGTGAATCACAAAACAGGTTGAGGTCTTaGCCCTTCCAAACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: ATGFKLITKFKVMSGESQNRLRS*PFQTVA
Trigger: AGCCACAGTTTGGAAGGGGCAAGACCTCAACCTGTT...TTGTGATTCACCAGACATCACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTGCTGTCGCTCCTTATTaGAGAACAGATCTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFAVAPY*RTDLWG
Trigger: TCCCCACAGATCTGTTCTCCAATAAGGAGCGACAGC...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGATGTCTGGTGAATCACAAGTTCTTGCCATACTGTaGCTTCTCCTTCACTTGCCC +
Preference number: 4 (lower is better)
Translates to: ATGFKLITKFKVMSGESQVLAIL*LLLHLP
Trigger: GGGCAAGTGAAGGAGAAGCCACAGTATGGCAAGAAC...TTGTGATTCACCAGACATCACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393265.6
ENST00000532405.6
CDS-3UTR CCA 90 bp AGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGAGAAGCACAAGAAGATaGCGTAGAGAACCAGCACGT +
Preference number: 4 (lower is better)
Translates to: SLRKGLATGFKLITKFKVRSTRR*RREPAR
Trigger: ACGTGCTGGTTCTCTACGCCATCTTCTTGTGCTTCT...CACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TACCTTTTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATAAGTGCCAATGCAAGATaGCATACAGAGGATTTGTGT +
Preference number: 4 (lower is better)
Translates to: YLFPYSKPNTSVPMQDGISANAR*HTEDLC
Trigger: ACACAAATCCTCTGTATGCCATCTTGCATTGGCACT...TATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAAAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp ACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAATATTCGTTCTTGCCATACTGTaGCTTCTCCTTCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: TSSWVVPIHSSVQNISIFVLAIL*LLLHSL
Trigger: GAGGCTGTGAAGGAGAAGCCACAGTATGGCAAGAAC...GAATATTGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525557.5
ENST00000531433.5
CDS-3UTR TCA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATTCACCAAGTTTAAAGTaGTGTCTGGTGAATCACAAA +
Preference number: 4 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHSPSLK*CLVNHK
Trigger: TTTGTGATTCACCAGACATCACTTTAAACTTGGTGA...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTAGGATACGTGTGCTCTaGAAGCTACACAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFRIRVL*KLHKAS
Trigger: TGAAGCCTTGTGTAGCTTTCAGAGCACACGTATCCT...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATGACCGGGTTACCGTTTaGAATGCTCTTTTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNDRVTV*NALLFD
Trigger: GTCAAACAAAAGAGCATTGCAAACGGTAACCCGGTC...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTTTTGAAGCGGCTTACTaGTCACACCATTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFFEAAY*SHHWPS
Trigger: ACTCGGCCAATGGTGTGAGCAGTAAGCCGCTTCAAA...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGAACCAAACACCTCAGTaGCAATGCAAGATGGCATAC +
Preference number: 4 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQNQTPQ*QCKMAY
Trigger: GTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTT...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGAGGAAATCCTTCGGGTaGACACACATAAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQRKSFG*THIKRA
Trigger: TGCTCTCTTTATGTGTGTGCACCCGAAGGATTTCCT...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTTGTACCCTGTGGATATaGCCTTTGGGGAACAGCTCT +
Preference number: 4 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFCTLWI*PLGNSS
Trigger: AGAGCTGTTCCCCAAAGGGCATATCCACAGGGTACA...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp ATATTTTTCTATCTAGTTTTGAGTCAGCCTCCCATTCTTGGCCTGCCACGTGTACTAGAAACCAAAAGCTaGACATTCCCTCTCTTGATA +
Preference number: 4 (lower is better)
Translates to: IFFYLVLSQPPILGLPRVLETKS*TFPLLI
Trigger: TATCAAGAGAGGGAATGTGCAGCTTTTGGTTTCTAG...TACACGTGGCAGGCCAAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACCTGTGTCCCATTCACTaGGGCCATCAACTTTCTATT +
Preference number: 4 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNLCPIH*GHQLSI
Trigger: AATAGAAAGTTGATGGCCCCAGTGAATGGGACACAG...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATACATCTTCGCTCAGATaGAGTCTCTCACAGATCTTC +
Preference number: 4 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNTSSLR*SLSQIF
Trigger: GAAGATCTGTGAGAGACTCCATCTGAGCGAAGATGT...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp CCTCTTACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAAGTGCCAATGCAAGATaGCATACAGAGGATTTGTGT +
Preference number: 4 (lower is better)
Translates to: PLTSSWVVPIHSSVQNISSANAR*HTEDLC
Trigger: ACACAAATCCTCTGTATGCCATCTTGCATTGGCACT...TGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGTAAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp TACCTTTTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACCTCTTACATCATCATaGGTAGTTCCCATACATTCA +
Preference number: 4 (lower is better)
Translates to: YLFPYSKPNTSVPMQDGIPLTSS*VVPIHS
Trigger: TGAATGTATGGGAACTACCCATGATGATGTAAGAGG...TATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAAAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTATTAAGGTGACAGAGTaGTCCCGAGGGCTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFIKVTE*SRGLWN
Trigger: ATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAAT...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTTTTGCACCTGCCCTATaGGATCTTGTGCTCACAAAT +
Preference number: 4 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFFAPAL*DLVLTN
Trigger: ATTTGTGAGCACAAGATCTCATAGGGCAGGTGCAAA...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGGCTGGAGGTGACACTTaGGAACAACATTCCTATTTT +
Preference number: 4 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQAGGDT*EQHSYF
Trigger: AAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGC...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTAACACTTCCTCCTTTTaGAACTCAGGAGGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFNTSSF*NSGGPK
Trigger: TTTAGGGCCTCCTGAGTTTCAAAAGGAGGAAGTGTT...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp ACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAATATTCTGGTGCATTATCAGCTaGTTAGGTCTGTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: TSSWVVPIHSSVQNISIFWCIIS*LGLLRQ
Trigger: CTGCCTTAACAGACCTAAGCAGCTGATAATGCACCA...GAATATTGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CCA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTACACGTTGCTTCCTATaGTGTTGGAGACTGCCATGT +
Preference number: 4 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFTRCFL*CWRLPC
Trigger: ACATGGCAGTCTCCAACACCATAGGAAGCAACGTGT...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACAGTGCCAATGCAAGATaGCATACAGAGGATTTGTGT +
Preference number: 4 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNSANAR*HTEDLC
Trigger: ACACAAATCCTCTGTATGCCATCTTGCATTGGCACT...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CCA 90 bp GAGACTAAGAGTATTCATTTAGAATCTCAAATGGGTTCTGCTGAGGAAGAGGAGGGGCATATAAATAACTaGAACTTTCAACAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ETKSIHLESQMGSAEEEEGHINN*NFQQGG
Trigger: ACCACCCTGTTGAAAGTTCCAGTTATTTATATGCCC...CTCCTCTTCCTCAGCAGAACCCATTTGAGATTCTAAATGAATACTCTTAGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp AGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGGAACCCAGGAGTCAATaGTATATTGATGAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SLRKGLATGFKLITKFKVEPRSQ*YIDEVL
Trigger: CAAAACCTCATCAATATATCATTGACTCCTGGGTTC...CACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR TCA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATCTTTTCTGCCCCCAATaGGAAGAGCTAAATTCATTT +
Preference number: 4 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNLFCPQ*EELNSF
Trigger: AAATGAATTTAGCTCTTCTCATTGGGGGCAGAAAAG...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR GCA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTGACCGGGTTACCGTTTaGAATGCTCTTTTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFDRVTV*NALLFD
Trigger: GTCAAACAAAAGAGCATTGCAAACGGTAACCCGGTC...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATACAACATTCCTATTTTaGACCTGCCCTATGAGATCT +
Preference number: 4 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNTTFLF*TCPMRS
Trigger: AGATCTCATAGGGCAGGTGCAAAATAGGAATGTTGT...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp CACAAAACTAGTGTCCCGATTGAGTTTTCTTTATCAACAAGCAAACACAGCAACTCTGATTTTCACACTTaGCTTCAGCTAACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: HKTSVPIEFSLSTSKHSNSDFHT*LQLTRK
Trigger: CTTTCTGGTTAGCTGAAGGCAAGTGTGAAAATCAGA...GTTGCTGTGTTTGCTTGTTGATAAAGAAAACTCAATCGGGACACTAGTTTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR TCA 90 bp AGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGTCACCAAGTTTAAAGTaGTGTCTGGTGAATCACAAA +
Preference number: 4 (lower is better)
Translates to: SLRKGLATGFKLITKFKVSPSLK*CLVNHK
Trigger: TTTGTGATTCACCAGACATCACTTTAAACTTGGTGA...CACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTTTCCTATTTTGCACCTaGCCTATGAGATCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFFLFCT*PMRSCA
Trigger: AGCACAAGATCTCATAGGGCAGGTGCAAAATAGGAA...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTACAACATTCCTATTTTaGACCTGCCCTATGAGATCT +
Preference number: 4 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFTTFLF*TCPMRS
Trigger: AGATCTCATAGGGCAGGTGCAAAATAGGAATGTTGT...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR GCA 90 bp GCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGATGTCTGGTGAATCACAATCTGATTTTCACACTTaGCTTCAGCTAACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ATGFKLITKFKVMSGESQSDFHT*LQLTRK
Trigger: CTTTCTGGTTAGCTGAAGGCAAGTGTGAAAATCAGA...TTGTGATTCACCAGACATCACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS GCA 90 bp AAGTTTGGCGGCGGCCGCCCCGGCTGCCAGCCGGCGATGTTCCCCTaGTTCCCGACGAGCCGAGCCCGGGCGGCCGAGTGCGCGCCGCGG +
Preference number: 5 (lower is better)
Translates to: KFGGGRPGCQPAMFP*FPTSRARAAECAPR
Trigger: CCGCGGCGCGCACTCGGCCGCCCGGGCTCGGCTCGTCGGGAAGCAGGGGAACATCGCCGGCTGGCAGCCGGGGCGGCCGCCGCCAAACTT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS GCA 90 bp TCGCCCGGCCACAGCCCTGGCAGCAGCGCCGTAGGGAGCACTCAGTaGGCCCCCGCGCCCCGCGCCGCCGCGCCCACTCGCAGCATCCTC +
Preference number: 5 (lower is better)
Translates to: SPGHSPGSSAVGSTQ*APAPRAAAPTRSIL
Trigger: GAGGATGCTGCGAGTGGGCGCGGCGGCGCGGGGCGCGGGGGCGCACTGAGTGCTCCCTACGGCGCTGCTGCCAGGGCTGTGGCCGGGCGA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS GCA 90 bp CCGGGCTCGCAGGGCTGGCGCAGTCCCGGCGCTAGAGCCGCTACCTaGCCGCTCCGCTTCGGCCGGCTCGCCCGGCCACAGCCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: PGSQGWRSPGARAAT*PLRFGRLARPQPWQ
Trigger: CTGCCAGGGCTGTGGCCGGGCGAGCCGGCCGAAGCGGAGCGGGCAGGTAGCGGCTCTAGCGCCGGGACTGCGCCAGCCCTGCGAGCCCGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS CCA 90 bp GCTACCTGCCCGCTCCGCTTCGGCCGGCTCGCCCGGCCACAGCCCTaGCAGCAGCGCCGTAGGGAGCACTCAGTGCGCCCCCGCGCCCCG +
Preference number: 5 (lower is better)
Translates to: ATCPLRFGRLARPQP*QQRRREHSVRPRAP
Trigger: CGGGGCGCGGGGGCGCACTGAGTGCTCCCTACGGCGCTGCTGCCAGGGCTGTGGCCGGGCGAGCCGGCCGAAGCGGAGCGGGCAGGTAGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS CCA 90 bp CTCATGGCCCGAGGGCGAGGTCGGCGGGGGAGCCCCTTGGGAAGGTaGGGACGCGCGACGCGGCCGGAGCTCAGAGTCCCGCGCGCCGCG +
Preference number: 5 (lower is better)
Translates to: LMARGRGRRGSPLGR*GRATRPELRVPRAA
Trigger: CGCGGCGCGCGGGACTCTGAGCTCCGGCCGCGTCGCGCGTCCCCACCTTCCCAAGGGGCTCCCCCGCCGACCTCGCCCTCGGGCCATGAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS TCA 90 bp CGGCCGAGTGCGCGCCGCGGGAAGGCTGGCTGGACGCGCGGTACCTaGGACCCTCGCGGCGAGCAGGCTCGACGTCGGCCCTCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: RPSARRGKAGWTRGT*DPRGEQARRRPSQG
Trigger: CCCCTGGGAGGGCCGACGTCGAGCCTGCTCGCCGCGAGGGTCTCAGGTACCGCGCGTCCAGCCAGCCTTCCCGCGGCGCGCACTCGGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS GCA 90 bp CTCGCAGCATCCTCCTCCTCCAAGTTTGGCGGCGGCCGCCCCGGCTaGCAGCCGGCGATGTTCCCCTGCTTCCCGACGAGCCGAGCCCGG +
Preference number: 5 (lower is better)
Translates to: LAASSSSKFGGGRPG*QPAMFPCFPTSRAR
Trigger: CCGGGCTCGGCTCGTCGGGAAGCAGGGGAACATCGCCGGCTGGCAGCCGGGGCGGCCGCCGCCAAACTTGGAGGAGGAGGATGCTGCGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS GCA 90 bp GAGCGGCCGGAGGGTCCCGCGGAGCGCCATCCCGGAGCGCCTGGGTaGCGTCTCTGGGAGAGGATGGGGAGCTTCAGCGGCCAGAGTGCA +
Preference number: 5 (lower is better)
Translates to: ERPEGPAERHPGAPG*RLWERMGSFSGQSA
Trigger: TGCACTCTGGCCGCTGAAGCTCCCCATCCTCTCCCAGAGACGGCACCCAGGCGCTCCGGGATGGCGCTCCGCGGGACCCTCCGGCCGCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS TCA 90 bp CGAAGCCGACTTGCTGCGGCAGCATCTCTCGCCTCCTGCGAACTTTaGGCGGCCGGAGGGTCCCGCGGAGCGCCATCCCGGAGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: RSRLAAAASLASCEL*AAGGSRGAPSRSAW
Trigger: CCAGGCGCTCCGGGATGGCGCTCCGCGGGACCCTCCGGCCGCTCAAAGTTCGCAGGAGGCGAGAGATGCTGCCGCAGCAAGTCGGCTTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS CCA 90 bp GCTTCAGCGGCCAGAGTGCAATCAGTGGCCGAGCGGCGCTGGGGCTaGAGCAGGCGGTGCGCGACTCAGAGGCGAGGAGCTCCGGGCCAA +
Preference number: 5 (lower is better)
Translates to: ASAARVQSVAERRWG*SRRCATQRRGAPGQ
Trigger: TTGGCCCGGAGCTCCTCGCCTCTGAGTCGCGCACCGCCTGCTCCAGCCCCAGCGCCGCTCGGCCACTGATTGCACTCTGGCCGCTGAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS CCA 90 bp TGGGGAGCTTCAGCGGCCAGAGTGCAATCAGTGGCCGAGCGGCGCTaGGGCTGGAGCAGGCGGTGCGCGACTCAGAGGCGAGGAGCTCCG +
Preference number: 5 (lower is better)
Translates to: WGASAARVQSVAERR*GWSRRCATQRRGAP
Trigger: CGGAGCTCCTCGCCTCTGAGTCGCGCACCGCCTGCTCCAGCCCCAGCGCCGCTCGGCCACTGATTGCACTCTGGCCGCTGAAGCTCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS CCA 90 bp CGGAGCGCCATCCCGGAGCGCCTGGGTGCCGTCTCTGGGAGAGGATaGGGAGCTTCAGCGGCCAGAGTGCAATCAGTGGCCGAGCGGCGC +
Preference number: 5 (lower is better)
Translates to: RSAIPERLGAVSGRG*GASAARVQSVAERR
Trigger: GCGCCGCTCGGCCACTGATTGCACTCTGGCCGCTGAAGCTCCCCATCCTCTCCCAGAGACGGCACCCAGGCGCTCCGGGATGGCGCTCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS CCA 90 bp GAGGGTCCCGCGGAGCGCCATCCCGGAGCGCCTGGGTGCCGTCTCTaGGAGAGGATGGGGAGCTTCAGCGGCCAGAGTGCAATCAGTGGC +
Preference number: 5 (lower is better)
Translates to: EGPAERHPGAPGCRL*ERMGSFSGQSAISG
Trigger: GCCACTGATTGCACTCTGGCCGCTGAAGCTCCCCATCCTCTCCCAGAGACGGCACCCAGGCGCTCCGGGATGGCGCTCCGCGGGACCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS GCA 90 bp GCACAGCACACCAGGGCCAGCACCGCGCACACGAAGCCGACTTGCTaGGGCAGCATCTCTCGCCTCCTGCGAACTTTGAGCGGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: AQHTRASTAHTKPTC*GSISRLLRTLSGRR
Trigger: CCTCCGGCCGCTCAAAGTTCGCAGGAGGCGAGAGATGCTGCCGCAGCAAGTCGGCTTCGTGTGCGCGGTGCTGGCCCTGGTGTGCTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS GCA 90 bp GACGCACAGCACACCAGGGCCAGCACCGCGCACACGAAGCCGACTTaGTGCGGCAGCATCTCTCGCCTCCTGCGAACTTTGAGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: DAQHTRASTAHTKPT*CGSISRLLRTLSGR
Trigger: CCGGCCGCTCAAAGTTCGCAGGAGGCGAGAGATGCTGCCGCAGCAAGTCGGCTTCGTGTGCGCGGTGCTGGCCCTGGTGTGCTGTGCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS CCA 90 bp TCTCTGGGAGAGGATGGGGAGCTTCAGCGGCCAGAGTGCAATCAGTaGCCGAGCGGCGCTGGGGCTGGAGCAGGCGGTGCGCGACTCAGA +
Preference number: 5 (lower is better)
Translates to: SLGEDGELQRPECNQ*PSGAGAGAGGARLR
Trigger: TCTGAGTCGCGCACCGCCTGCTCCAGCCCCAGCGCCGCTCGGCCACTGATTGCACTCTGGCCGCTGAAGCTCCCCATCCTCTCCCAGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCCCCCCAAATCCAGCCTaGCAGGGGCGGAACTCCAAG +
Preference number: 5 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLAPPNPA*QGRNSK
Trigger: CTTGGAGTTCCGCCCCTGCAAGGCTGGATTTGGGGG...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCGCACACGAAGCCGACTaGCTGCGGCAGCATCTCTCG +
Preference number: 5 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLAAHEAD*LRQHLS
Trigger: CGAGAGATGCTGCCGCAGCAAGTCGGCTTCGTGTGC...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS CCA 90 bp TGGAAGGGTCCACAGTGTGCCTCCTGGGCGAGGCCGGCAGGCAAGTaGCCCAGGCTGTGTTCAAGGCCACCTGAGAAGCACCAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: WKGPQCASWARPAGK*PRLCSRPPEKHQEA
Trigger: AGCCTCCTGGTGCTTCTCAGGTGGCCTTGAACACAGCCTGGGCCACTTGCCTGCCGGCCTCGCCCAGGAGGCACACTGTGGACCCTTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS-3UTR CAA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCCGGTCCAGTCGCCACTaGTTTAGGTGGATGCCGAGG +
Preference number: 5 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLARSSRH*FRWMPR
Trigger: CCTCGGCATCCACCTAAACAAGTGGCGACTGGACCG...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCCGGGGTAGATGGGGGTaGATGGACTTACTGCCACCC +
Preference number: 5 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLARGRWG*MDLLPP
Trigger: GGGTGGCAGTAAGTCCATCAACCCCCATCTACCCCG...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS TCA 90 bp GATGCCTGCCTCCCGGGACAGCTTGTCCTGGTGTCCCCTGACCAATaGCAGAACAAGGGTGTGTGCCCATGCCCGGAGTGGCTGCCGGGA +
Preference number: 5 (lower is better)
Translates to: DACLPGQLVLVSPDQ*QNKGVCPCPEWLPG
Trigger: TCCCGGCAGCCACTCCGGGCATGGGCACACACCCTTGTTCTGTCATTGGTCAGGGGACACCAGGACAAGCTGTCCCGGGAGGCAGGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS-3UTR CAA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCCGGGGCTTGCTGCAGTaGGGAATGGTGACGCACAGG +
Preference number: 5 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSRGLLQ*GMVTHR
Trigger: CCTGTGCGTCACCATTCCCAACTGCAGCAAGCCCCG...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS TCA 90 bp TCCCCAGGATGCCTGCCTCCCGGGACAGCTTGTCCTGGTGTCCCCTaGCCAATGACAGAACAAGGGTGTGTGCCCATGCCCGGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: SPGCLPPGTACPGVP*PMTEQGCVPMPGVA
Trigger: AGCCACTCCGGGCATGGGCACACACCCTTGTTCTGTCATTGGTCAGGGGACACCAGGACAAGCTGTCCCGGGAGGCAGGCATCCTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS-3UTR CAA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCGGCACATCTCCGTGGTaGGCAGCTCAGGGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSGTSPW*AAQGSL
Trigger: CAAAGACCCCTGAGCTGCCAACCACGGAGATGTGCC...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCTAGCAGAAGCTGTTTaGTGCCCCAAGCTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGLAEAV*CPKLPK
Trigger: CTTCGGCAGCTTGGGGCACAAAACAGCTTCTGCTAG...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS CCA 90 bp CCACTGACTTCCCCTCACCTTGTGAGCTGCCCTAGGCTGTGGTCCTaGCAGCTGGCAGCCACCGGGAAGTCTGGATGCCTGGCTTCAACT +
Preference number: 5 (lower is better)
Translates to: PLTSPHLVSCPRLWS*QLAATGKSGCLAST
Trigger: AGTTGAAGCCAGGCATCCAGACTTCCCGGTGGCTGCCAGCTGCCAGGACCACAGCCTAGGGCAGCTCACAAGGTGAGGGGAAGTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526482.1
CDS CCA 90 bp GTTTCCTGCAGGGTCCTGGGAGGTCTCCTGGGTTGGCACAGGTGGTaGGTGGCTCTTGGATGGGCATCTGCCACTGGCCTGAGTGACTCA +
Preference number: 5 (lower is better)
Translates to: VSCRVLGGLLGWHRW*VALGWASATGLSDS
Trigger: TGAGTCACTCAGGCCAGTGGCAGATGCCCATCCAAGAGCCACCCACCACCTGTGCCAACCCAGGAGACCTCCCAGGACCCTGCAGGAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS-3UTR CAA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCGGCACATCTCCGTGGTaGGCAGCTCAGGGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSGTSPW*AAQGSL
Trigger: CAAAGACCCCTGAGCTGCCAACCACGGAGATGTGCC...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCACCCTCGTCCTCAAGTaGAAGACCACTGAGCCCAAT +
Preference number: 5 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLATLVLK*KTTEPN
Trigger: ATTGGGCTCAGTGGTCTTCAACTTGAGGACGAGGGT...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCCTGGTCAGGGAAGCTaGGTGCATTATCAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGPGQGS*VHYQLL
Trigger: AAGCAGCTGATAATGCACCAAGCTTCCCTGACCAGG...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCAAAAGAAGCAACTGCTaGGGCCGGGTGCAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSKRSNC*GRVQGL
Trigger: GAGCCCCTGCACCCGGCCCAAGCAGTTGCTTCTTTT...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS TCA 90 bp GGGTTGCTCTGGGAAGGTGAGGAGCTGAGGCCCCCATGCTGTGAATaGGGAATGTTTCCTGCAGGGTCCTGGGAGGTCTCCTGGGTTGGC +
Preference number: 5 (lower is better)
Translates to: GLLWEGEELRPPCCE*GMFPAGSWEVSWVG
Trigger: GCCAACCCAGGAGACCTCCCAGGACCCTGCAGGAAACATTCCTCATTCACAGCATGGGGGCCTCAGCTCCTCACCTTCCCAGAGCAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 90 bp AATGTTTCCTGCAGGGTCCTGGGAGGTCTCCTGGGTTGGCACAGGTaGTGGGTGGCTCTTGGATGGGCATCTGCCACTGGCCTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: NVSCRVLGGLLGWHR*WVALGWASATGLSD
Trigger: GTCACTCAGGCCAGTGGCAGATGCCCATCCAAGAGCCACCCACCACCTGTGCCAACCCAGGAGACCTCCCAGGACCCTGCAGGAAACATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS-3UTR CAA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCACACCATTGGCCGAGTaGATCAGTCTCTGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSTPLAE*ISLCRS
Trigger: TGAGCGGCAGAGACTGATCAACTCGGCCAATGGTGT...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACCGCCTCCTGCGAACTTaGAGCGGCCGGAGGGTCCCG +
Preference number: 5 (lower is better)
Translates to: VARQRPRWLFLPVCERTDRLLRT*SGRRVP
Trigger: CGGGACCCTCCGGCCGCTCAAAGTTCGCAGGAGGCG...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp GTCCTGCCCACGGTGCCCTTAATCACCAGTCTCTCATTGCAGCTGACCCAGAACGAAGAAACCTGGACCTaGGGCCGCCCAGGAACGGCC +
Preference number: 5 (lower is better)
Translates to: VLPTVPLITSLSLQLTQNEETWT*GRPGTA
Trigger: GGCCGTTCCTGGGCGGCCCAAGGTCCAGGTTTCTTC...GTTCTGGGTCAGCTGCAATGAGAGACTGGTGATTAAGGGCACCGTGGGCAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS TCA 90 bp TCAACACTTGGGGCCTCTGGCCTTTGGGATGACTCCTGTCCTGGCTaGTTCGATGGCTCTGCTTCCACTCTGAGGAGCAGGAGCCCCCTC +
Preference number: 5 (lower is better)
Translates to: STLGASGLWDDSCPG*FDGSASTLRSRSPL
Trigger: GAGGGGGCTCCTGCTCCTCAGAGTGGAAGCAGAGCCATCGAATCAGCCAGGACAGGAGTCATCCCAAAGGCCAGAGGCCCCAAGTGTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 90 bp CACTCCAGCCTAAGGCCATGTGCTGGCTTCATGACAGCTCTGGGCTaGTGCTTTGGGACTCTGCTCCCGGCTGGACCAGATCTTGAGGGT +
Preference number: 5 (lower is better)
Translates to: HSSLRPCAGFMTALG*CFGTLLPAGPDLEG
Trigger: ACCCTCAAGATCTGGTCCAGCCGGGAGCAGAGTCCCAAAGCACCAGCCCAGAGCTGTCATGAAGCCAGCACATGGCCTTAGGCTGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS-3UTR CAA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCATCACCACGGGGTTCTaGCCATACTGTGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSITTGF*PYCGFS
Trigger: GGAGAAGCCACAGTATGGCAAGAACCCCGTGGTGAT...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCTCAGGGAAGGTGAACTaGGGAGGGCTGGAGCTCATA +
Preference number: 5 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSSGKVN*GGLELI
Trigger: TATGAGCTCCAGCCCTCCCAAGTTCACCTTCCCTGA...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp TGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCGCTAATCGTCACACCATTGGCCGAGTaGATCAGTCTCTGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: CHRVSRSAPRGRDSALIVTPLAE*ISLCRS
Trigger: TGAGCGGCAGAGACTGATCAACTCGGCCAATGGTGT...GACGATTAGCGCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525557.5
CDS-3UTR CAA 90 bp AAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGGAAGGAGGCAGGTGAACACCCACTaGACCTTGTCCCCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: KERTVAAYAGETCGGGRRQVNTH*TLSPLA
Trigger: GGCCAGAGGGGACAAGGTCAAGTGGGTGTTCACCTG...CCTCCTTCCCCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp TGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCGCTAATCGTCTGCAGTCTGGAACACTaGTCCCTGCTGCCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: CHRVSRSAPRGRDSALIVCSLEH*SLLPGK
Trigger: CTTTCCTGGCAGCAGGGACAAGTGTTCCAGACTGCA...GACGATTAGCGCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525557.5
CDS-3UTR CAA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCAACAGGTTGAGGTCTaGCCCCTTCCAAACTGTGGC +
Preference number: 5 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSQQVEV*PLPNCG
Trigger: GCCACAGTTTGGAAGGGGCAAGACCTCAACCTGTTG...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTAGCAGAAGCTGTTTaGTGCCCCAAGCTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSLAEAV*CPKLPK
Trigger: CTTCGGCAGCTTGGGGCACAAAACAGCTTCTGCTAG...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp AAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGGAAGGAGGATAAGAAGCAACTGCTaGGCGGGGCGCGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: KERTVAAYAGETCGGGRRIRSNC*AGRGGS
Trigger: TGAGCCACCGCGCCCCGCCAAGCAGTTGCTTCTTAT...CCTCCTTCCCCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS GCA 90 bp CAGCAACCCGTGCATTCCTTTGGGTGGGGTGGCCACACAGCGACCTaGTTGGAGCTGGGCACAGGGAAAGAAACCCCAATGTCATCTCCA +
Preference number: 5 (lower is better)
Translates to: QQPVHSFGWGGHTAT*LELGTGKETPMSSP
Trigger: TGGAGATGACATTGGGGTTTCTTTCCCTGTGCCCAGCTCCAAGCAGGTCGCTGTGTGGCCACCCCACCCAAAGGAATGCACGGGTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 90 bp AACCCGTGCATTCCTTTGGGTGGGGTGGCCACACAGCGACCTGCTTaGAGCTGGGCACAGGGAAAGAAACCCCAATGTCATCTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: NPCIPLGGVATQRPA*SWAQGKKPQCHLQP
Trigger: TGGCTGGAGATGACATTGGGGTTTCTTTCCCTGTGCCCAGCTCCAAGCAGGTCGCTGTGTGGCCACCCCACCCAAAGGAATGCACGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 90 bp CAGAAACTGCCAGAGATGATTAGCGTGCGGTGGGTGCCGAGAGTCTaGGGCAGCACTCTTGGTGGTGGCGAAGATGCCAGGGGTTATGTG +
Preference number: 5 (lower is better)
Translates to: QKLPEMISVRWVPRV*GSTLGGGEDARGYV
Trigger: CACATAACCCCTGGCATCTTCGCCACCACCAAGAGTGCTGCCCCAGACTCTCGGCACCCACCGCACGCTAATCATCTCTGGCAGTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 90 bp GTCAGCGGAGATCATGCCACTACACTCCAGCCTAAGGCCATGTGCTaGCTTCATGACAGCTCTGGGCTGGTGCTTTGGGACTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: VSGDHATTLQPKAMC*LHDSSGLVLWDSAP
Trigger: GGGAGCAGAGTCCCAAAGCACCAGCCCAGAGCTGTCATGAAGCCAGCACATGGCCTTAGGCTGGAGTGTAGTGGCATGATCTCCGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS-3UTR CAA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCTCTGGCAGGACACGTTaGCTAGCAGAAGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSSGRTR*LAEAVL
Trigger: CAAAACAGCTTCTGCTAGCAAACGTGTCCTGCCAGA...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGCTCGTGCCTCCCGTTTaGAAGCGGCTTACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: HTHTHSPSVANLQRLAWELVPPV*KRLTAH
Trigger: GTGAGCAGTAAGCCGCTTCAAAACGGGAGGCACGAG...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGCGGGGCTTGCTGCAGTaGGGAATGGTGACGCACAGG +
Preference number: 5 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGRGLLQ*GMVTHR
Trigger: CCTGTGCGTCACCATTCCCAACTGCAGCAAGCCCCG...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGCGGTCCAGTCGCCACTaGTTTAGGTGGATGCCGAGG +
Preference number: 5 (lower is better)
Translates to: QCVKERTVAAYAGETCGGRSSRH*FRWMPR
Trigger: CCTCGGCATCCACCTAAACAAGTGGCGACTGGACCG...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCACAAGGACAGTGCATaGTGTCACATAGAAGATCTG +
Preference number: 5 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGHKDSA*CHIEDL
Trigger: CAGATCTTCTATGTGACACAATGCACTGTCCTTGTG...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCAAGGCTTCAGAGAATaGAAAACCAGCAGGGACGCC +
Preference number: 5 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSQGFRE*KTSRDA
Trigger: GGCGTCCCTGCTGGTTTTCAATTCTCTGAAGCCTTG...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS GCA 90 bp GCAGTCAGCGGAGATCATGCCACTACACTCCAGCCTAAGGCCATGTaGTGGCTTCATGACAGCTCTGGGCTGGTGCTTTGGGACTCTGCT +
Preference number: 5 (lower is better)
Translates to: AVSGDHATTLQPKAM*WLHDSSGLVLWDSA
Trigger: AGCAGAGTCCCAAAGCACCAGCCCAGAGCTGTCATGAAGCCAGCACATGGCCTTAGGCTGGAGTGTAGTGGCATGATCTCCGCTGACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS-3UTR CAA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGTCAGGGAAGGTGAACTaGGGAGGGCTGGAGCTCATA +
Preference number: 5 (lower is better)
Translates to: HTHTHSPSVANLQRLAWESGKVN*GGLELI
Trigger: TATGAGCTCCAGCCCTCCCAAGTTCACCTTCCCTGA...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp CAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCCCTGGGTCCAAACTTATaGGTGATCATGATTCGTAAG +
Preference number: 5 (lower is better)
Translates to: QPCRGGTPRRRRMPSSLALGPNL*VIMIRK
Trigger: CTTACGAATCATGATCACCAATAAGTTTGGACCCAG...GGCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCCAGGTGAACACCCACTaGACCTTGTCCCCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSQVNTH*TLSPLA
Trigger: GGCCAGAGGGGACAAGGTCAAGTGGGTGTTCACCTG...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGACCAGCCCCCGGCTGTaGATCTTCACTGTTGATCCA +
Preference number: 5 (lower is better)
Translates to: HTHTHSPSVANLQRLAWETSPRL*IFTVDP
Trigger: TGGATCAACAGTGAAGATCAACAGCCGGGGGCTGGT...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp AAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTCCCCCAAATCCAGCCTaGCAGGGGCGGAACTCCAAG +
Preference number: 5 (lower is better)
Translates to: KVIPTLTPQVWPTYRGWPPPNPA*QGRNSK
Trigger: CTTGGAGTTCCGCCCCTGCAAGGCTGGATTTGGGGG...AGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCCCCCCAAATCCAGCCTaGCAGGGGCGGAACTCCAAG +
Preference number: 5 (lower is better)
Translates to: SSFQCVKERTVAAYAGETPPNPA*QGRNSK
Trigger: CTTGGAGTTCCGCCCCTGCAAGGCTGGATTTGGGGG...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCCAGCGTCACGATCTTaGAGTCTCAGGAAGGGATTA +
Preference number: 5 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSPASRS*SLRKGL
Trigger: TAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGG...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATCGCCTCCTGCGAACTTaGAGCGGCCGGAGGGTCCCG +
Preference number: 5 (lower is better)
Translates to: SGLEVTLENNIPILHLPYRLLRT*SGRRVP
Trigger: CGGGACCCTCCGGCCGCTCAAAGTTCGCAGGAGGCG...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp AAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGGGAAGGAGGTGTAATCCCAGCACTTaGGGAAACCGAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: KERTVAAYAGETCGGGRRCNPST*GNRGGW
Trigger: CCACCCACCTCGGTTTCCCAAAGTGCTGGGATTACA...CCTCCTTCCCCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS TCA 90 bp GGCACAGGTGGTGGGTGGCTCTTGGATGGGCATCTGCCACTGGCCTaGGTGACTCAGCACACAATACTTCTCTTCTTCACCATGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GTGGGWLLDGHLPLA*VTQHTILLFFTMKA
Trigger: GGCCTTCATGGTGAAGAAGAGAAGTATTGTGTGCTGAGTCACTCAGGCCAGTGGCAGATGCCCATCCAAGAGCCACCCACCACCTGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS TCA 90 bp CCTTCTATGGGGAGCATCAACACTTGGGGCCTCTGGCCTTTGGGATaGCTCCTGTCCTGGCTGATTCGATGGCTCTGCTTCCACTCTGAG +
Preference number: 5 (lower is better)
Translates to: PSMGSINTWGLWPLG*LLSWLIRWLCFHSE
Trigger: CTCAGAGTGGAAGCAGAGCCATCGAATCAGCCAGGACAGGAGTCATCCCAAAGGCCAGAGGCCCCAAGTGTTGATGCTCCCCATAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 90 bp CACCAAGGATGTGCAGCAGGACGGCTCCGTGCTGTCGCTCCTTATTaGAGAACAGATCTGTGGGGAACTCGTGAATCGCAGGATCTGTGC +
Preference number: 5 (lower is better)
Translates to: HQGCAAGRLRAVAPY*RTDLWGTRESQDLC
Trigger: GCACAGATCCTGCGATTCACGAGTTCCCCACAGATCTGTTCTCCAATAAGGAGCGACAGCACGGAGCCGTCCTGCTGCACATCCTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS CCA 90 bp GCCAGGGGTTATGTGCTGGAGAGTGTTATTAGCGGGCTCCTTCTATaGGGAGCATCAACACTTGGGGCCTCTGGCCTTTGGGATGACTCC +
Preference number: 5 (lower is better)
Translates to: ARGYVLESVISGLLL*GASTLGASGLWDDS
Trigger: GGAGTCATCCCAAAGGCCAGAGGCCCCAAGTGTTGATGCTCCCCATAGAAGGAGCCCGCTAATAACACTCTCCAGCACATAACCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS-3UTR CAA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCTGGCTTCTCCTTCACTaGCCCCAGCAATGGCACGGA +
Preference number: 5 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSWLLLH*PQQWHG
Trigger: TCCGTGCCATTGCTGGGGCAAGTGAAGGAGAAGCCA...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393265.6
ENST00000532405.6
CDS-3UTR CAA 90 bp AGAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTGCCCCTTCAGGTGAACACCCACTaGACCTTGTCCCCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: RMSAIMGPKPQQVEVLPLQVNTH*TLSPLA
Trigger: GGCCAGAGGGGACAAGGTCAAGTGGGTGTTCACCTG...AAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCCGGGGCTTGCTGCAGTaGGGAATGGTGACGCACAGG +
Preference number: 5 (lower is better)
Translates to: TSGLEVTLENNIPILHLPRGLLQ*GMVTHR
Trigger: CCTGTGCGTCACCATTCCCAACTGCAGCAAGCCCCG...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp GCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTCGGGGCTTGCTGCAGTaGGGAATGGTGACGCACAGG +
Preference number: 5 (lower is better)
Translates to: ARQRPRWLFLPVCERTDSRGLLQ*GMVTHR
Trigger: CCTGTGCGTCACCATTCCCAACTGCAGCAAGCCCCG...ACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGACCAGCCCCCGGCTGTaGATCTTCACTGTTGATCCA +
Preference number: 5 (lower is better)
Translates to: QCVKERTVAAYAGETCGGTSPRL*IFTVDP
Trigger: TGGATCAACAGTGAAGATCAACAGCCGGGGGCTGGT...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCTGGCATACAGAGGATTaGTGTCTTTACGATCATTAC +
Preference number: 5 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGWHTED*CLYDHY
Trigger: GTAATGATCGTAAAGACACAAATCCTCTGTATGCCA...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACCACACAGCCAAGGGCTaGGCTTTCCCACAGGCACTC +
Preference number: 5 (lower is better)
Translates to: VARQRPRWLFLPVCERTDHTAKG*AFPQAL
Trigger: GAGTGCCTGTGGGAAAGCCAAGCCCTTGGCTGTGTG...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCGGAGCTCCCCAAGAGTaGGCCACAGTGGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: TSGLEVTLENNIPILHLPGAPQE*ATVAQP
Trigger: TGGCTGAGCCACTGTGGCCAACTCTTGGGGAGCTCC...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS TCA 90 bp CCAAAAACTGAGAACAGCTCGATCGGGCCTGAGAGTGTGTGCTCTTaGAGAATCTCCCAGCCAGCAACCCGTGCATTCCTTTGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: PKTENSSIGPESVCS*RISQPATRAFLWVG
Trigger: CCCCACCCAAAGGAATGCACGGGTTGCTGGCTGGGAGATTCTTCAAGAGCACACACTCTCAGGCCCGATCGAGCTGTTCTCAGTTTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS TCA 90 bp TGCTGGAGGAACAACTGGGCTCAGAAGGAGAGAGCCTGGAGTCTGTaGGACAAGAGCCAGGCCTCCCCCTTCTCTAATTCCAGGAGTACA +
Preference number: 5 (lower is better)
Translates to: CWRNNWAQKERAWSL*DKSQASPFSNSRST
Trigger: TGTACTCCTGGAATTAGAGAAGGGGGAGGCCTGGCTCTTGTCTCACAGACTCCAGGCTCTCTCCTTCTGAGCCCAGTTGTTCCTCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS GCA 90 bp CTGACCAATGACAGAACAAGGGTGTGTGCCCATGCCCGGAGTGGCTaGCGGGAAAAGAACTCAATGACAGCACATTCTCCCAGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: LTNDRTRVCAHARSG*REKNSMTAHSPSSP
Trigger: TGGACTGCTGGGAGAATGTGCTGTCATTGAGTTCTTTTCCCGGCAGCCACTCCGGGCATGGGCACACACCCTTGTTCTGTCATTGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS GCA 90 bp CACAGAAAACGCAGCTTCAGGCTCCATCCTACAGAACCAACCCCATaGCAGGTACTGCTGGAGGAACAACTGGGCTCAGAAGGAGAGAGC +
Preference number: 5 (lower is better)
Translates to: HRKRSFRLHPTEPTP*QVLLEEQLGSEGES
Trigger: GCTCTCTCCTTCTGAGCCCAGTTGTTCCTCCAGCAGTACCTGGCATGGGGTTGGTTCTGTAGGATGGAGCCTGAAGCTGCGTTTTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS GCA 90 bp ATGCCCTCAGCCCCTCACTGCTGCATGAAAGCTCAAATCCCTCCCTaGTCAGAAGCCTCCATCCCAGAGGAAGACGGAACCCACAGAAAA +
Preference number: 5 (lower is better)
Translates to: MPSAPHCCMKAQIPP*SEASIPEEDGTHRK
Trigger: TTTTCTGTGGGTTCCGTCTTCCTCTGGGATGGAGGCTTCTGAGCAGGGAGGGATTTGAGCTTTCATGCAGCAGTGAGGGGCTGAGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS-3UTR CAA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGTGCAGTCTGGAACACTaGTCCCTGCTGCCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRCSLEH*SLLPGK
Trigger: CTTTCCTGGCAGCAGGGACAAGTGTTCCAGACTGCA...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCCGGTCCAGTCGCCACTaGTTTAGGTGGATGCCGAGG +
Preference number: 5 (lower is better)
Translates to: TSGLEVTLENNIPILHLPRSSRH*FRWMPR
Trigger: CCTCGGCATCCACCTAAACAAGTGGCGACTGGACCG...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACCGGTCCAGTCGCCACTaGTTTAGGTGGATGCCGAGG +
Preference number: 5 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYRSSRH*FRWMPR
Trigger: CCTCGGCATCCACCTAAACAAGTGGCGACTGGACCG...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCGGAGAGATGAGATGCTaGGCACATCTCCGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSGEMRC*AHLRGW
Trigger: CCAACCACGGAGATGTGCCAAGCATCTCATCTCTCC...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGCTAAACCCCAACAGGTaGAGGTCTTGCCCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: QCVKERTVAAYAGETCGGLNPNR*RSCPFQ
Trigger: TTGGAAGGGGCAAGACCTCAACCTGTTGGGGTTTAG...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp CCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCCTGGCTTTTTCTATCTAGTTTaGAGTCAGCCTCCCATTCTT +
Preference number: 5 (lower is better)
Translates to: PALQGRNSKEEEDAQQPGFFYLV*SQPPIL
Trigger: AAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAA...GCCAGGCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp ACCACGCTTGACCTGGTGAGGCAAAATTCCAAACCAGAAGTCCACAGGAACCACTTGGGGAACAGCTCTTaGCAGCAAGGCGAAGGGGCC +
Preference number: 5 (lower is better)
Translates to: TTLDLVRQNSKPEVHRNHLGNSS*QQGEGA
Trigger: GGCCCCTTCGCCTTGCTGCAAAGAGCTGTTCCCCAA...GTGGTTCCTGTGGACTTCTGGTTTGGAATTTTGCCTCACCAGGTCAAGCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCGCATCCCCTTGGGCTTaGTGGATCTGCCTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: TSGLEVTLENNIPILHLPASPWA*WICLAS
Trigger: AGAGGCCAGGCAGATCCACAAAGCCCAAGGGGATGC...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS CCA 90 bp ACCCTGGCAGGTTTCCTCCTTCTATACGGAGAGACTCCTCCCTCTTaGGGGTTACCTGAGACAGGGCAGAACAGACTCCCAAAATGCACA +
Preference number: 5 (lower is better)
Translates to: TLAGFLLLYGETPPS*GLPETGQNRLPKCT
Trigger: TGTGCATTTTGGGAGTCTGTTCTGCCCTGTCTCAGGTAACCCCCAAGAGGGAGGAGTCTCTCCGTATAGAAGGAGGAAACCTGCCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 90 bp CACCAAGGATGTGCAGCAGGACGGCTCCGTGCTGTCGCTCCTTATTaGAGAACAGATCTGTGGGGAACTCGTGAATCGATGTTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: HQGCAAGRLRAVAPY*RTDLWGTRESMFAE
Trigger: CTCTGCAAACATCGATTCACGAGTTCCCCACAGATCTGTTCTCCAATAAGGAGCGACAGCACGGAGCCGTCCTGCTGCACATCCTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554461.5
CDS-3UTR CAA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGTGCTGTCGCTCCTTATaGGAGAACAGATCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGCCRSL*ENRSVG
Trigger: CCCCACAGATCTGTTCTCCAATAAGGAGCGACAGCA...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp AGAACGCCAGTGTCACAGGGTGTCCAGATCAGCTCCCAGGGGCCGCGACTCAGCGTTTGCAATGCTCTTTaGTTTGACTGTGAAAAAGGC +
Preference number: 5 (lower is better)
Translates to: RTPVSQGVQISSQGPRLSVCNAL*FDCEKG
Trigger: GCCTTTTTCACAGTCAAACAAAAGAGCATTGCAAAC...GCTGAGTCGCGGCCCCTGGGAGCTGATCTGGACACCCTGTGACACTGGCGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCGCCTCCAGCTCACTGTaGACCGGGTTACCGTTTGCA +
Preference number: 5 (lower is better)
Translates to: TSGLEVTLENNIPILHLPASSSL*TGLPFA
Trigger: TGCAAACGGTAACCCGGTCAACAGTGAGCTGGAGGC...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGGCTTCTCCTTCACTaGCCCCAGCAATGGCACGGA +
Preference number: 5 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGWLLLH*PQQWHG
Trigger: TCCGTGCCATTGCTGGGGCAAGTGAAGGAGAAGCCA...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp AAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTATCACCACGGGGTTCTaGCCATACTGTGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: KVIPTLTPQVWPTYRGWPITTGF*PYCGFS
Trigger: GGAGAAGCCACAGTATGGCAAGAACCCCGTGGTGAT...AGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCATCACCACGGGGTTCTaGCCATACTGTGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SSFQCVKERTVAAYAGETITTGF*PYCGFS
Trigger: GGAGAAGCCACAGTATGGCAAGAACCCCGTGGTGAT...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGCAGTCTGGAACACTaGTCCCTGCTGCCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: SSFQCVKERTVAAYAGETCSLEH*SLLPGK
Trigger: CTTTCCTGGCAGCAGGGACAAGTGTTCCAGACTGCA...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGCGGCACATCGGCAAGTaGACGAAGGTAAAGACGTTA +
Preference number: 5 (lower is better)
Translates to: QCVKERTVAAYAGETCGGRHIGK*TKVKTL
Trigger: TAACGTCTTTACCTTCGTCAACTTGCCGATGTGCCG...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp CAAATCCAGCCTTGCAGGGGCGGAACTCCAAGGAGGAGGAGGATGCCCAGCAGCAACAACATTCCTATTTaGCACCTGCCCTATGAGATC +
Preference number: 5 (lower is better)
Translates to: QIQPCRGGTPRRRRMPSSNNIPI*HLPYEI
Trigger: GATCTCATAGGGCAGGTGCAAAATAGGAATGTTGTT...GCTGCTGGGCATCCTCCTCCTCCTTGGAGTTCCGCCCCTGCAAGGCTGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp AAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTCAACAGGTTGAGGTCTaGCCCCTTCCAAACTGTGGC +
Preference number: 5 (lower is better)
Translates to: KVIPTLTPQVWPTYRGWPQQVEV*PLPNCG
Trigger: GCCACAGTTTGGAAGGGGCAAGACCTCAACCTGTTG...AGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTGCCCCTCTCCATGCTTaGAGAAGCCCCAAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSAPLHA*RSPKGG
Trigger: GCCTCCCTTGGGGCTTCTCAAAGCATGGAGAGGGGC...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGCTGTGGATATGCCCTTaGGGGAACAGCTCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGLWICP*GNSSLQ
Trigger: CTGCAAAGAGCTGTTCCCCAAAGGGCATATCCACAG...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS TCA 90 bp TCTTGCCATACTGTGGCTTCTCCTTCACTGTTGAGCGCAACACCGTaGTTAGTGCTGATCTCTCTGAGGACAACACCCAAGTGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: SCHTVASPSLLSATP*LVLISLRTTPKCWG
Trigger: GCCCCAGCACTTGGGTGTTGTCCTCAGAGAGATCAGCACTAATCACGGTGTTGCGCTCAACAGTGAAGGAGAAGCCACAGTATGGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526482.1
CDS TCA 90 bp TTTCCTCCTTCTATACGGAGAGACTCCTCCCTCTTGGGGGTTACCTaGGACAGGGCAGAACAGACTCCCAAAATGCACATGGGAGGAAGC +
Preference number: 5 (lower is better)
Translates to: FPPSIRRDSSLLGVT*DRAEQTPKMHMGGS
Trigger: GCTTCCTCCCATGTGCATTTTGGGAGTCTGTTCTGCCCTGTCTCAGGTAACCCCCAAGAGGGAGGAGTCTCTCCGTATAGAAGGAGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 90 bp GAGCTGGGGAAACTGCATTCCAGCAAAAGGCAGGTGCAAAGGTCCTaGGGCAGGTGCGCAGTTCTAGGAATGACAGTGTGTTCTAGGAAT +
Preference number: 5 (lower is better)
Translates to: ELGKLHSSKRQVQRS*GRCAVLGMTVCSRN
Trigger: ATTCCTAGAACACACTGTCATTCCTAGAACTGCGCACCTGCCCCAGGACCTTTGCACCTGCCTTTTGCTGGAATGCAGTTTCCCCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS-3UTR CAA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACATCACCACGGGGTTCTaGCCATACTGTGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYITTGF*PYCGFS
Trigger: GGAGAAGCCACAGTATGGCAAGAACCCCGTGGTGAT...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACTCAGGGAAGGTGAACTaGGGAGGGCTGGAGCTCATA +
Preference number: 5 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYSGKVN*GGLELI
Trigger: TATGAGCTCCAGCCCTCCCAAGTTCACCTTCCCTGA...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp AGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCACACCATTGGCCGAGTaGATCAGTCTCTGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: RQRPRWLFLPVCERTDSGTPLAE*ISLCRS
Trigger: TGAGCGGCAGAGACTGATCAACTCGGCCAATGGTGT...GCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGTTACTGCTCACACCATaGGCCGAGTTGATCAGTCTC +
Preference number: 5 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRLLLTP*AELISL
Trigger: GAGACTGATCAACTCGGCCAATGGTGTGAGCAGTAA...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCCGGCACATCGGCAAGTaGACGAAGGTAAAGACGTTA +
Preference number: 5 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSRHIGK*TKVKTL
Trigger: TAACGTCTTTACCTTCGTCAACTTGCCGATGTGCCG...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCCCCCCAAATCCAGCCTaGCAGGGGCGGAACTCCAAG +
Preference number: 5 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSPPNPA*QGRNSK
Trigger: CTTGGAGTTCCGCCCCTGCAAGGCTGGATTTGGGGG...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTCAACAGGTTGAGGTCTaGCCCCTTCCAAACTGTGGC +
Preference number: 5 (lower is better)
Translates to: ARQRPRWLFLPVCERTDSQQVEV*PLPNCG
Trigger: GCCACAGTTTGGAAGGGGCAAGACCTCAACCTGTTG...ACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCCTAAACCCCAACAGGTaGAGGTCTTGCCCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: SSFQCVKERTVAAYAGETLNPNR*RSCPFQ
Trigger: TTGGAAGGGGCAAGACCTCAACCTGTTGGGGTTTAG...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGCATGGAAATCACGTCTaGAGGGCATTAGAGAGACCA +
Preference number: 5 (lower is better)
Translates to: QCVKERTVAAYAGETCGGHGNHV*RALERP
Trigger: TGGTCTCTCTAATGCCCTCAAGACGTGATTTCCATG...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCATAGCTCCACCCTGGTaGCAGAACAGGAGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: SSFQCVKERTVAAYAGETIAPPW*QNRREK
Trigger: CTTTTCCCTCCTGTTCTGCAACCAGGGTGGAGCTAT...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS TCA 90 bp TCCACAGGAACATTCCCGTTCTCAATGTTCTCGTGCCTCCCGTTTTaGAGCGGCTTACTGCTCACACCATTGGCCGAGTTGATCAGTCTC +
Preference number: 5 (lower is better)
Translates to: STGTFPFSMFSCLPF*SGLLLTPLAELISL
Trigger: GAGACTGATCAACTCGGCCAATGGTGTGAGCAGTAAGCCGCTTCAAAACGGGAGGCACGAGAACATTGAGAACGGGAATGTTCCTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000526482.1
ENST00000531433.5
ENST00000532405.6
ENST00000554925.5
ENST00000556739.5
ENST00000676001.1
CDS CCA 90 bp AATCGCAGGATCTGTGCAGTTCTTGGCTGTCTGTGTCCCATTCACTaGGGCCATCAACTTTCTATTTCTCCACGTGTCTGGCAGGACACG +
Preference number: 5 (lower is better)
Translates to: NRRICAVLGCLCPIH*GHQLSISPRVWQDT
Trigger: CGTGTCCTGCCAGACACGTGGAGAAATAGAAAGTTGATGGCCCCAGTGAATGGGACACAGACAGCCAAGAACTGCACAGATCCTGCGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp TCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTCTGGCAGGACACGTTaGCTAGCAGAAGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: SSFQCVKERTVAAYAGETSGRTR*LAEAVL
Trigger: CAAAACAGCTTCTGCTAGCAAACGTGTCCTGCCAGA...GGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGGCCTCCAGCTCACTGTaGACCGGGTTACCGTTTGCA +
Preference number: 5 (lower is better)
Translates to: EIPTSVTIFESQEGISYWASSSL*TGLPFA
Trigger: TGCAAACGGTAACCCGGTCAACAGTGAGCTGGAGGC...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATGCCTCCAGCTCACTGTaGACCGGGTTACCGTTTGCA +
Preference number: 5 (lower is better)
Translates to: SGLEVTLENNIPILHLPYASSSL*TGLPFA
Trigger: TGCAAACGGTAACCCGGTCAACAGTGAGCTGGAGGC...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTCTCGTGCCTCCCGTTTaGAAGCGGCTTACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSLVPPV*KRLTAH
Trigger: GTGAGCAGTAAGCCGCTTCAAAACGGGAGGCACGAG...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp AGAATGTCTGCCATCATGGGCCCTAAACCCCAACAGGTTGAGGTCTTGCCCCTTCGGCACATCGGCAAGTaGACGAAGGTAAAGACGTTA +
Preference number: 5 (lower is better)
Translates to: RMSAIMGPKPQQVEVLPLRHIGK*TKVKTL
Trigger: TAACGTCTTTACCTTCGTCAACTTGCCGATGTGCCG...AAGGGGCAAGACCTCAACCTGTTGGGGTTTAGGGCCCATGATGGCAGACATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCCTAAACCCCAACAGGTaGAGGTCTTGCCCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: TSGLEVTLENNIPILHLPLNPNR*RSCPFQ
Trigger: TTGGAAGGGGCAAGACCTCAACCTGTTGGGGTTTAG...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACACCCTCGTCCTCAAGTaGAAGACCACTGAGCCCAAT +
Preference number: 5 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYTLVLK*KTTEPN
Trigger: ATTGGGCTCAGTGGTCTTCAACTTGAGGACGAGGGT...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATCCACTGCCTTCCTCCTaGTCCCTCGATCAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: SGLEVTLENNIPILHLPYPLPSS*SLDQGF
Trigger: GAAGCCTTGATCGAGGGACAAGGAGGAAGGCAGTGG...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525557.5
CDS-3UTR CAA 90 bp GCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGATGTCTGGTGAATCACAACCTCCTCCTCCAAGTTaGGCGGCGGCCGCCCCGGCT +
Preference number: 5 (lower is better)
Translates to: ATGFKLITKFKVMSGESQPPPPS*AAAAPA
Trigger: AGCCGGGGCGGCCGCCGCCAAACTTGGAGGAGGAGG...TTGTGATTCACCAGACATCACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp CACAAAACTAGTGTCCCGATTGAGTTTTCTTTATCAACAAGCAAACACAGCAACCGCCTCCTGCGAACTTaGAGCGGCCGGAGGGTCCCG +
Preference number: 5 (lower is better)
Translates to: HKTSVPIEFSLSTSKHSNRLLRT*SGRRVP
Trigger: CGGGACCCTCCGGCCGCTCAAAGTTCGCAGGAGGCG...GTTGCTGTGTTTGCTTGTTGATAAAGAAAACTCAATCGGGACACTAGTTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCGCCCAGGAACGGCCTTaGGTCAGGGTCTGTAGGACT +
Preference number: 5 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSAQERP*VRVCRT
Trigger: AGTCCTACAGACCCTGACCAAAGGCCGTTCCTGGGC...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACTCTGGCAGGACACGTTaGCTAGCAGAAGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYSGRTR*LAEAVL
Trigger: CAAAACAGCTTCTGCTAGCAAACGTGTCCTGCCAGA...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTACACCATTGGCCGAGTaGATCAGTCTCTGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSTPLAE*ISLCRS
Trigger: TGAGCGGCAGAGACTGATCAACTCGGCCAATGGTGT...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACTTACTGCTCACACCATaGGCCGAGTTGATCAGTCTC +
Preference number: 5 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYLLLTP*AELISL
Trigger: GAGACTGATCAACTCGGCCAATGGTGTGAGCAGTAA...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GAAATTCCAACCAGCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGCTAGCAGAAGCTGTTTaGTGCCCCAAGCTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: EIPTSVTIFESQEGISYWLAEAV*CPKLPK
Trigger: CTTCGGCAGCTTGGGGCACAAAACAGCTTCTGCTAG...CCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGGTTGGAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTTCTGTAGGACTGCCCTaGGGTGATAGACACACCCCA +
Preference number: 5 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSSVGLP*GDRHTP
Trigger: TGGGGTGTGTCTATCACCCAAGGGCAGTCCTACAGA...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp TCAGGGGTCTTTGAAGCTGCTCAGATAATGGCCCCCAAATCCAGCCTTGCAGGGCTGATGCAATTAGGCTaGCAAATCCCCATAAACAGG +
Preference number: 5 (lower is better)
Translates to: SGVFEAAQIMAPKSSLAGLMQLG*QIPINR
Trigger: CCTGTTTATGGGGATTTGCAAGCCTAATTGCATCAG...CCCTGCAAGGCTGGATTTGGGGGCCATTATCTGAGCAGCTTCAAAGACCCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS CCA 90 bp TGTCCCATTCACTGGGGCCATCAACTTTCTATTTCTCCACGTGTCTaGCAGGACACGTTTGCTAGCAGAAGCTGTTTTGTGCCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: CPIHWGHQLSISPRV*QDTFASRSCFVPCK
Trigger: TTTGCAGGGCACAAAACAGCTTCTGCTAGCAAACGTGTCCTGCCAGACACGTGGAGAAATAGAAAGTTGATGGCCCCAGTGAATGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393265.6
CDS CCA 90 bp TCCAGGACCACTCGTGGGCAATTGATGCTCTTTTCGCCTCTCTTCTaGGGCCCAGTCTTGGCTAATTACAAGGGTCTTTCAGTTCGTTAT +
Preference number: 5 (lower is better)
Translates to: SRTTRGQLMLFSPLF*GPVLANYKGLSVRY
Trigger: ATAACGAACTGAAAGACCCTTGTAATTAGCCAAGACTGGGCCCCAGAAGAGAGGCGAAAAGAGCATCAATTGCCCACGAGTGGTCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526482.1
CDS-3UTR CAA 90 bp GCGTCACGATCTTTGAGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCGCCTCCAGCTCACTGTaGACCGGGTTACCGTTTGCA +
Preference number: 5 (lower is better)
Translates to: ASRSLSLRKGLATGFKLIASSSL*TGLPFA
Trigger: TGCAAACGGTAACCCGGTCAACAGTGAGCTGGAGGC...GATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACTCAAAGATCGTGACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCTCAGGGAAGGTGAACTaGGGAGGGCTGGAGCTCATA +
Preference number: 5 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSSGKVN*GGLELI
Trigger: TATGAGCTCCAGCCCTCCCAAGTTCACCTTCCCTGA...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCTGCAGTCTGGAACACTaGTCCCTGCTGCCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSCSLEH*SLLPGK
Trigger: CTTTCCTGGCAGCAGGGACAAGTGTTCCAGACTGCA...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GAGACTAAGAGTATTCATTTAGAATCTCAAATGGGTTCTGCTGAGGAAGAGGAGCCCCCAAATCCAGCCTaGCAGGGGCGGAACTCCAAG +
Preference number: 5 (lower is better)
Translates to: ETKSIHLESQMGSAEEEEPPNPA*QGRNSK
Trigger: CTTGGAGTTCCGCCCCTGCAAGGCTGGATTTGGGGG...CTCCTCTTCCTCAGCAGAACCCATTTGAGATTCTAAATGAATACTCTTAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GTCTCTGAGTTAGCACCTTTCCACGTTAGTCTCTTACCTTTTTCCCTATTCCAAGGCACATCTCCGTGGTaGGCAGCTCAGGGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: VSELAPFHVSLLPFSLFQGTSPW*AAQGSL
Trigger: CAAAGACCCCTGAGCTGCCAACCACGGAGATGTGCC...TTGGAATAGGGAAAAAGGTAAGAGACTAACGTGGAAAGGTGCTAACTCAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GTGGCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACCACAAGGACAGTGCATaGTGTCACATAGAAGATCTG +
Preference number: 5 (lower is better)
Translates to: VARQRPRWLFLPVCERTDHKDSA*CHIEDL
Trigger: CAGATCTTCTATGTGACACAATGCACTGTCCTTGTG...GTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp CATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGGGAGTTTTTCTATCTAGTTTaGAGTCAGCCTCCCATTCTT +
Preference number: 5 (lower is better)
Translates to: HTHTHSPSVANLQRLAWEFFYLV*SQPPIL
Trigger: AAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAA...CTCCCAGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATACCCTCGTCCTCAAGTaGAAGACCACTGAGCCCAAT +
Preference number: 5 (lower is better)
Translates to: SGLEVTLENNIPILHLPYTLVLK*KTTEPN
Trigger: ATTGGGCTCAGTGGTCTTCAACTTGAGGACGAGGGT...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TACCTTTTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACCAGCCTGCATCCCCTaGGGCTTTGTGGATCTGCCT +
Preference number: 5 (lower is better)
Translates to: YLFPYSKPNTSVPMQDGIPACIP*GFVDLP
Trigger: AGGCAGATCCACAAAGCCCAAGGGGATGCAGGCTGG...TATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAAAAGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS TCA 90 bp GAGAAAATAAACTTGCAAGGAAGTGCTACTGTCACAGGCACAGAGTaGTGGAGACAGTCACAGCAGTGCCAGAAAAGGCACTGTGTAGGC +
Preference number: 5 (lower is better)
Translates to: EKINLQGSATVTGTE*WRQSQQCQKRHCVG
Trigger: GCCTACACAGTGCCTTTTCTGGCACTGCTGTGACTGTCTCCATCACTCTGTGCCTGTGACAGTAGCACTTCCTTGCAAGTTTATTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS-3UTR CAA 90 bp AACTTGGCTATTAAGGTGACAGAGTGGTCCCGAGGGCTCTGGAATCCCTGCAGCGTTTGCAATGCTCTTTaGTTTGACTGTGAAAAAGGC +
Preference number: 5 (lower is better)
Translates to: NLAIKVTEWSRGLWNPCSVCNAL*FDCEKG
Trigger: GCCTTTTTCACAGTCAAACAAAAGAGCATTGCAAAC...GCTGCAGGGATTCCAGAGCCCTCGGGACCACTCTGTCACCTTAATAGCCAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGGTTTGCAATGCTCTTTaGTTTGACTGTGAAAAAGGC +
Preference number: 5 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRVCNAL*FDCEKG
Trigger: GCCTTTTTCACAGTCAAACAAAAGAGCATTGCAAAC...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp TACCTTTTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATATGGCTTCTCCTTCACTaGCCCCAGCAATGGCACGGA +
Preference number: 5 (lower is better)
Translates to: YLFPYSKPNTSVPMQDGIWLLLH*PQQWHG
Trigger: TCCGTGCCATTGCTGGGGCAAGTGAAGGAGAAGCCA...TATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAAAAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393265.6
ENST00000532405.6
CDS-3UTR CAA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTTTACTGCTCACACCATaGGCCGAGTTGATCAGTCTC +
Preference number: 5 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSLLLTP*AELISL
Trigger: GAGACTGATCAACTCGGCCAATGGTGTGAGCAGTAA...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp ATATTTTTCTATCTAGTTTTGAGTCAGCCTCCCATTCTTGGCCTGCCACGTGTACTCGTGCCTCCCGTTTaGAAGCGGCTTACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: IFFYLVLSQPPILGLPRVLVPPV*KRLTAH
Trigger: GTGAGCAGTAAGCCGCTTCAAAACGGGAGGCACGAG...TACACGTGGCAGGCCAAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp CCTCTTACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCACAGGTGAACACCCACTaGACCTTGTCCCCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: PLTSSWVVPIHSSVQNISQVNTH*TLSPLA
Trigger: GGCCAGAGGGGACAAGGTCAAGTGGGTGTTCACCTG...TGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGTAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp AGTCTCAGGAAGGGATTAGCTACTGGATTTAAACTCATCACCAAGTTTAAAGTGCGGGGCTTGCTGCAGTaGGGAATGGTGACGCACAGG +
Preference number: 5 (lower is better)
Translates to: SLRKGLATGFKLITKFKVRGLLQ*GMVTHR
Trigger: CCTGTGCGTCACCATTCCCAACTGCAGCAAGCCCCG...CACTTTAAACTTGGTGATGAGTTTAAATCCAGTAGCTAATCCCTTCCTGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTCGGCACATCGGCAAGTaGACGAAGGTAAAGACGTTA +
Preference number: 5 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSRHIGK*TKVKTL
Trigger: TAACGTCTTTACCTTCGTCAACTTGCCGATGTGCCG...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp TTAACCAGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGCACATCTCCGTGGTaGGCAGCTCAGGGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: LTSTSDTLSSVQQAMKFVGTSPW*AAQGSL
Trigger: CAAAGACCCCTGAGCTGCCAACCACGGAGATGTGCC...AACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATCAACAGGTTGAGGTCTaGCCCCTTCCAAACTGTGGC +
Preference number: 5 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHQQVEV*PLPNCG
Trigger: GCCACAGTTTGGAAGGGGCAAGACCTCAACCTGTTG...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp CGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGCCAGAAAGCAGTTTGTaGTTTTTCAGGCAATCTCTT +
Preference number: 5 (lower is better)
Translates to: RWLFLPVCERTDSGCLCRPESSL*FFRQSL
Trigger: AAGAGATTGCCTGAAAAACAACAAACTGCTTTCTGG...CCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp CAGTGTGTGAAAGAACGGACAGTGGCTGCCTATGCAGGAGAGACCTGTGGTGGGTTTTTCTATCTAGTTTaGAGTCAGCCTCCCATTCTT +
Preference number: 5 (lower is better)
Translates to: QCVKERTVAAYAGETCGGFFYLV*SQPPIL
Trigger: AAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAA...CCCACCACAGGTCTCTCCTGCATAGGCAGCCACTGTCCGTTCTTTCACACACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGGCACACGAAGCCGACTaGCTGCGGCAGCATCTCTCG +
Preference number: 5 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQAHEAD*LRQHLS
Trigger: CGAGAGATGCTGCCGCAGCAAGTCGGCTTCGTGTGC...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTATCACCAGTCTCTCATaGCAGCTGACCCAGAACCTT +
Preference number: 5 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSITSLS*QLTQNL
Trigger: AAGGTTCTGGGTCAGCTGCAATGAGAGACTGGTGAT...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp GTCTCTGAGTTAGCACCTTTCCACGTTAGTCTCTTACCTTTTTCCCTATTCCAAAGGGAGGCTTCATGCTaGAGGGGCTCACAGGATCAG +
Preference number: 5 (lower is better)
Translates to: VSELAPFHVSLLPFSLFQREASC*RGSQDQ
Trigger: CTGATCCTGTGAGCCCCTCAAGCATGAAGCCTCCCT...TTGGAATAGGGAAAAAGGTAAGAGACTAACGTGGAAAGGTGCTAACTCAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp AGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATTGCTGTCGCTCCTTATaGGAGAACAGATCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: STSDTLSSVQQAMKFVGHCCRSL*ENRSVG
Trigger: CCCCACAGATCTGTTCTCCAATAAGGAGCGACAGCA...ATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp AAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACAGAGGCTGGCCTGTTTGCAATGCTCTTTaGTTTGACTGTGAAAAAGGC +
Preference number: 5 (lower is better)
Translates to: KVIPTLTPQVWPTYRGWPVCNAL*FDCEKG
Trigger: GCCTTTTTCACAGTCAAACAAAAGAGCATTGCAAAC...AGGCCAGCCTCTGTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCCTGGGTCCAAACTTATaGGTGATCATGATTCGTAAG +
Preference number: 5 (lower is better)
Translates to: TSGLEVTLENNIPILHLPLGPNL*VIMIRK
Trigger: CTTACGAATCATGATCACCAATAAGTTTGGACCCAG...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp GCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTCTGGGTCCAAACTTATaGGTGATCATGATTCGTAAG +
Preference number: 5 (lower is better)
Translates to: ARQRPRWLFLPVCERTDSLGPNL*VIMIRK
Trigger: CTTACGAATCATGATCACCAATAAGTTTGGACCCAG...ACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp TTAACCAGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTCTCGTGCCTCCCGTTTaGAAGCGGCTTACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: LTSTSDTLSSVQQAMKFVLVPPV*KRLTAH
Trigger: GTGAGCAGTAAGCCGCTTCAAAACGGGAGGCACGAG...AACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATCAGGTGAACACCCACTaGACCTTGTCCCCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNQVNTH*TLSPLA
Trigger: GGCCAGAGGGGACAAGGTCAAGTGGGTGTTCACCTG...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GTCTCTGAGTTAGCACCTTTCCACGTTAGTCTCTTACCTTTTTCCCTATTCCAAACCAGCCCCCGGCTGTaGATCTTCACTGTTGATCCA +
Preference number: 5 (lower is better)
Translates to: VSELAPFHVSLLPFSLFQTSPRL*IFTVDP
Trigger: TGGATCAACAGTGAAGATCAACAGCCGGGGGCTGGT...TTGGAATAGGGAAAAAGGTAAGAGACTAACGTGGAAAGGTGCTAACTCAGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGGGCACATCTCCGTGGTaGGCAGCTCAGGGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQGTSPW*AAQGSL
Trigger: CAAAGACCCCTGAGCTGCCAACCACGGAGATGTGCC...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GCCAGACAAAGACCACGATGGCTCTTCCTTCCAGTGTGTGAAAGAACGGACAGTAACAACATTCCTATTTaGCACCTGCCCTATGAGATC +
Preference number: 5 (lower is better)
Translates to: ARQRPRWLFLPVCERTDSNNIPI*HLPYEI
Trigger: GATCTCATAGGGCAGGTGCAAAATAGGAATGTTGTT...ACTGTCCGTTCTTTCACACACTGGAAGGAAGAGCCATCGTGGTCTTTGTCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp ACCTCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCAACAACATTCCTATTTaGCACCTGCCCTATGAGATC +
Preference number: 5 (lower is better)
Translates to: TSGLEVTLENNIPILHLPNNIPI*HLPYEI
Trigger: GATCTCATAGGGCAGGTGCAAAATAGGAATGTTGTT...GGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS-3UTR CAA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCCCAGCGTCACGATCTTaGAGTCTCAGGAAGGGATTA +
Preference number: 5 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSPASRS*SLRKGL
Trigger: TAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGG...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GTCTCTGAGTTAGCACCTTTCCACGTTAGTCTCTTACCTTTTTCCCTATTCCAAAAAATCCCAGTCTGCTaGGGGAGTCCGGGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: VSELAPFHVSLLPFSLFQKIPVC*GSPGSL
Trigger: CAGAGAACCCGGACTCCCCAAGCAGACTGGGATTTT...TTGGAATAGGGAAAAAGGTAAGAGACTAACGTGGAAAGGTGCTAACTCAGAGAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp GCAGAAGTCCTTCTGACTAAAGTGTGCAGGAGAGATGAGATGCTTGGCACATCTGGATTAAGAATTTTATaGGCCTGGCCCGTGGACAAG +
Preference number: 5 (lower is better)
Translates to: AEVLLTKVCRRDEMLGTSGLRIL*AWPVDK
Trigger: CTTGTCCACGGGCCAGGCCAATAAAATTCTTAATCC...AGATGTGCCAAGCATCTCATCTCTCCTGCACACTTTAGTCAGAAGGACTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACGTTTGCAATGCTCTTTaGTTTGACTGTGAAAAAGGC +
Preference number: 5 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYVCNAL*FDCEKG
Trigger: GCCTTTTTCACAGTCAAACAAAAGAGCATTGCAAAC...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GAGACTAAGAGTATTCATTTAGAATCTCAAATGGGTTCTGCTGAGGAAGAGGAGATCACCACGGGGTTCTaGCCATACTGTGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ETKSIHLESQMGSAEEEEITTGF*PYCGFS
Trigger: GGAGAAGCCACAGTATGGCAAGAACCCCGTGGTGAT...CTCCTCTTCCTCAGCAGAACCCATTTGAGATTCTAAATGAATACTCTTAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp ACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAATATTCCGGTCCAGTCGCCACTaGTTTAGGTGGATGCCGAGG +
Preference number: 5 (lower is better)
Translates to: TSSWVVPIHSSVQNISIFRSSRH*FRWMPR
Trigger: CCTCGGCATCCACCTAAACAAGTGGCGACTGGACCG...GAATATTGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TTAACCAGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGAGAGATGAGATGCTaGGCACATCTCCGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: LTSTSDTLSSVQQAMKFVGEMRC*AHLRGW
Trigger: CCAACCACGGAGATGTGCCAAGCATCTCATCTCTCC...AACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp CCTCTTACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAGGAGAGATGAGATGCTaGGCACATCTCCGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: PLTSSWVVPIHSSVQNISGEMRC*AHLRGW
Trigger: CCAACCACGGAGATGTGCCAAGCATCTCATCTCTCC...TGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGTAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp ACACCTTCCACCCTAACCACGCTTGACCTGGTGAGGCAAAATTCCAAACCAGAAAACAACATTCCTATTTaGCACCTGCCCTATGAGATC +
Preference number: 5 (lower is better)
Translates to: TPSTLTTLDLVRQNSKPENNIPI*HLPYEI
Trigger: GATCTCATAGGGCAGGTGCAAAATAGGAATGTTGTT...TTCTGGTTTGGAATTTTGCCTCACCAGGTCAAGCGTGGTTAGGGTGGAAGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp AACCAGGAGGGTAAAGTCATACCCACACTCACTCCCCAAGTGTGGCCAACTTACCCAGAAAGCAGTTTGTaGTTTTTCAGGCAATCTCTT +
Preference number: 5 (lower is better)
Translates to: NQEGKVIPTLTPQVWPTYPESSL*FFRQSL
Trigger: AAGAGATTGCCTGAAAAACAACAAACTGCTTTCTGG...GTAAGTTGGCCACACTTGGGGAGTGAGTGTGGGTATGACTTTACCCTCCTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TCTGGGCTGGAGGTGACACTTGAGAACAACATTCCTATTTTGCACCTGCCCTATGCAAAGAAGGCTCTGTaGTTTGGGACATTCCCTTTA +
Preference number: 5 (lower is better)
Translates to: SGLEVTLENNIPILHLPYAKKAL*FGTFPL
Trigger: TAAAGGGAATGTCCCAAACAACAGAGCCTTCTTTGC...ATAGGGCAGGTGCAAAATAGGAATGTTGTTCTCAAGTGTCACCTCCAGCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp ATATTTTTCTATCTAGTTTTGAGTCAGCCTCCCATTCTTGGCCTGCCACGTGTATCTGGCAGGACACGTTaGCTAGCAGAAGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: IFFYLVLSQPPILGLPRVSGRTR*LAEAVL
Trigger: CAAAACAGCTTCTGCTAGCAAACGTGTCCTGCCAGA...TACACGTGGCAGGCCAAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TTAACCAGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTTGCTGTCGCTCCTTATaGGAGAACAGATCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: LTSTSDTLSSVQQAMKFVCCRSL*ENRSVG
Trigger: CCCCACAGATCTGTTCTCCAATAAGGAGCGACAGCA...AACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTGCCTCCAGCTCACTGTaGACCGGGTTACCGTTTGCA +
Preference number: 5 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFASSSL*TGLPFA
Trigger: TGCAAACGGTAACCCGGTCAACAGTGAGCTGGAGGC...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACACACCATTGGCCGAGTaGATCAGTCTCTGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNTPLAE*ISLCRS
Trigger: TGAGCGGCAGAGACTGATCAACTCGGCCAATGGTGT...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TACCTTTTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACGGCACATCGGCAAGTaGACGAAGGTAAAGACGTTA +
Preference number: 5 (lower is better)
Translates to: YLFPYSKPNTSVPMQDGIRHIGK*TKVKTL
Trigger: TAACGTCTTTACCTTCGTCAACTTGCCGATGTGCCG...TATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAAAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TTAACCAGCACTTCTGACACACTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTCTAAACCCCAACAGGTaGAGGTCTTGCCCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: LTSTSDTLSSVQQAMKFVLNPNR*RSCPFQ
Trigger: TTGGAAGGGGCAAGACCTCAACCTGTTGGGGTTTAG...AACAAATTTCATAGCCTGCTGAACTGAACTGAGTGTGTCAGAAGTGCTGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GAGCAGTTTGGAGAATCAAAACAGAGACAGAAGCACTTTGGAACCTGGATGAGCCACAAGGACAGTGCATaGTGTCACATAGAAGATCTG +
Preference number: 5 (lower is better)
Translates to: EQFGESKQRQKHFGTWMSHKDSA*CHIEDL
Trigger: CAGATCTTCTATGTGACACAATGCACTGTCCTTGTG...GCTCATCCAGGTTCCAAAGTGCTTCTGTCTCTGTTTTGATTCTCCAAACTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATGGATCTGTGCAGTTCTaGGCTGTCTGTGTCCCATTC +
Preference number: 5 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNGSVQF*AVCVPF
Trigger: GAATGGGACACAGACAGCCAAGAACTGCACAGATCC...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTGCTGTCGCTCCTTATaGGAGAACAGATCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNCCRSL*ENRSVG
Trigger: CCCCACAGATCTGTTCTCCAATAAGGAGCGACAGCA...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTCTCGTGCCTCCCGTTTaGAAGCGGCTTACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFLVPPV*KRLTAH
Trigger: GTGAGCAGTAAGCCGCTTCAAAACGGGAGGCACGAG...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTTGCAGTCTGGAACACTaGTCCCTGCTGCCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFCSLEH*SLLPGK
Trigger: CTTTCCTGGCAGCAGGGACAAGTGTTCCAGACTGCA...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTACCAGCCCCCGGCTGTaGATCTTCACTGTTGATCCA +
Preference number: 5 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFTSPRL*IFTVDP
Trigger: TGGATCAACAGTGAAGATCAACAGCCGGGGGCTGGT...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp ACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAATATTCGGAGAGATGAGATGCTaGGCACATCTCCGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: TSSWVVPIHSSVQNISIFGEMRC*AHLRGW
Trigger: CCAACCACGGAGATGTGCCAAGCATCTCATCTCTCC...GAATATTGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACCAAGGCTTCAGAGAATaGAAAACCAGCAGGGACGCC +
Preference number: 5 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNQGFRE*KTSRDA
Trigger: GGCGTCCCTGCTGGTTTTCAATTCTCTGAAGCCTTG...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp CCTCTTACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCATCCTCTCTTCTTCCATaGAAAGAGGACTGCGCGTCT +
Preference number: 5 (lower is better)
Translates to: PLTSSWVVPIHSSVQNISSSLLP*KEDCAS
Trigger: AGACGCGCAGTCCTCTTTCAATGGAAGAAGAGAGGA...TGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGTAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp CTCAGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTACTGCTCACACCATaGGCCGAGTTGATCAGTCTC +
Preference number: 5 (lower is better)
Translates to: LSSVQQAMKFVGHINNWNLLLTP*AELISL
Trigger: GAGACTGATCAACTCGGCCAATGGTGTGAGCAGTAA...GTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGTTACTGCTCACACCATaGGCCGAGTTGATCAGTCTC +
Preference number: 5 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQLLLTP*AELISL
Trigger: GAGACTGATCAACTCGGCCAATGGTGTGAGCAGTAA...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TTTCCCTATTCCAAACCAAACACCTCAGTGCCAATGCAAGATGGCATACAGAGGTGGCATACAGAGGATTaGTGTCTTTACGATCATTAC +
Preference number: 5 (lower is better)
Translates to: FPYSKPNTSVPMQDGIQRWHTED*CLYDHY
Trigger: GTAATGATCGTAAAGACACAAATCCTCTGTATGCCA...CCTCTGTATGCCATCTTGCATTGGCACTGAGGTGTTTGGTTTGGAATAGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGCCAGCGTCACGATCTTaGAGTCTCAGGAAGGGATTA +
Preference number: 5 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQPASRS*SLRKGL
Trigger: TAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGG...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATCCAGCGTCACGATCTTaGAGTCTCAGGAAGGGATTA +
Preference number: 5 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNPASRS*SLRKGL
Trigger: TAATCCCTTCCTGAGACTCAAAGATCGTGACGCTGG...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp ACATCATCATGGGTAGTTCCCATACATTCATCCGTGCAAAATATCTCAATATTCACCCTCGTCCTCAAGTaGAAGACCACTGAGCCCAAT +
Preference number: 5 (lower is better)
Translates to: TSSWVVPIHSSVQNISIFTLVLK*KTTEPN
Trigger: ATTGGGCTCAGTGGTCTTCAACTTGAGGACGAGGGT...GAATATTGAGATATTTTGCACGGATGAATGTATGGGAACTACCCATGATGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTCAAGGCTTCAGAGAATaGAAAACCAGCAGGGACGCC +
Preference number: 5 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFQGFRE*KTSRDA
Trigger: GGCGTCCCTGCTGGTTTTCAATTCTCTGAAGCCTTG...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GTCTCTGAGTTAGCACCTTTCCACGTTAGTCTCTTACCTTTTTCCCTATTCCAACTGGGTCCAAACTTATaGGTGATCATGATTCGTAAG +
Preference number: 5 (lower is better)
Translates to: VSELAPFHVSLLPFSLFQLGPNL*VIMIRK
Trigger: CTTACGAATCATGATCACCAATAAGTTTGGACCCAG...TTGGAATAGGGAAAAAGGTAAGAGACTAACGTGGAAAGGTGCTAACTCAGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GAGACTAAGAGTATTCATTTAGAATCTCAAATGGGTTCTGCTGAGGAAGAGGAGAACAACATTCCTATTTaGCACCTGCCCTATGAGATC +
Preference number: 5 (lower is better)
Translates to: ETKSIHLESQMGSAEEEENNIPI*HLPYEI
Trigger: GATCTCATAGGGCAGGTGCAAAATAGGAATGTTGTT...CTCCTCTTCCTCAGCAGAACCCATTTGAGATTCTAAATGAATACTCTTAGTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp ATATTTTTCTATCTAGTTTTGAGTCAGCCTCCCATTCTTGGCCTGCCACGTGTATGGCATACAGAGGATTaGTGTCTTTACGATCATTAC +
Preference number: 5 (lower is better)
Translates to: IFFYLVLSQPPILGLPRVWHTED*CLYDHY
Trigger: GTAATGATCGTAAAGACACAAATCCTCTGTATGCCA...TACACGTGGCAGGCCAAGAATGGGAGGCTGACTCAAAACTAGATAGAAAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GCATTGTGTCACATAGAAGATCTGGAAAGTACAGCTGTAAACTATAATCTCCAGCACAAGGACAGTGCATaGTGTCACATAGAAGATCTG +
Preference number: 5 (lower is better)
Translates to: ALCHIEDLESTAVNYNLQHKDSA*CHIEDL
Trigger: CAGATCTTCTATGTGACACAATGCACTGTCCTTGTG...CTGGAGATTATAGTTTACAGCTGTACTTTCCAGATCTTCTATGTGACACAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp GTCTCTGAGTTAGCACCTTTCCACGTTAGTCTCTTACCTTTTTCCCTATTCCAACCAGAAAGCAGTTTGTaGTTTTTCAGGCAATCTCTT +
Preference number: 5 (lower is better)
Translates to: VSELAPFHVSLLPFSLFQPESSL*FFRQSL
Trigger: AAGAGATTGCCTGAAAAACAACAAACTGCTTTCTGG...TTGGAATAGGGAAAAAGGTAAGAGACTAACGTGGAAAGGTGCTAACTCAGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp ATATTAGGAAATGACCTGAGGAACCCAGGAGTCAATGATATATTGATGAGGTTTCCATCTACCTGCTATTaGGTAGGTTCCCTCAGAAAC +
Preference number: 5 (lower is better)
Translates to: ILGNDLRNPGVNDILMRFPSTCY*VGSLRN
Trigger: GTTTCTGAGGGAACCTACCAAATAGCAGGTAGATGG...AAACCTCATCAATATATCATTGACTCCTGGGTTCCTCAGGTCATTTCCTAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS-3UTR CAA 90 bp GAGACTAAGAGTATTCATTTAGAATCTCAAATGGGTTCTGCTGAGGAAGAGGAGTGGCATACAGAGGATTaGTGTCTTTACGATCATTAC +
Preference number: 5 (lower is better)
Translates to: ETKSIHLESQMGSAEEEEWHTED*CLYDHY
Trigger: GTAATGATCGTAAAGACACAAATCCTCTGTATGCCA...CTCCTCTTCCTCAGCAGAACCCATTTGAGATTCTAAATGAATACTCTTAGTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp TTTTCACACTTGCCTTCAGCTAACCAGAAAGCAGTTTGTTGTTTTTCAGGCAATCCAGAAAGCAGTTTGTaGTTTTTCAGGCAATCTCTT +
Preference number: 5 (lower is better)
Translates to: FSHLPSANQKAVCCFSGNPESSL*FFRQSL
Trigger: AAGAGATTGCCTGAAAAACAACAAACTGCTTTCTGG...ATTGCCTGAAAAACAACAAACTGCTTTCTGGTTAGCTGAAGGCAAGTGTGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
CDS-3UTR CAA 90 bp AGTTCAGTTCAGCAGGCTATGAAATTTGTTGGGCATATAAATAACTGGAACTTTGTCCCAACCAACATGTaGCATAAGAAGCAACTGCTT +
Preference number: 5 (lower is better)
Translates to: SSVQQAMKFVGHINNWNFVPTNM*HKKQLL
Trigger: AAGCAGTTGCTTCTTATGCAACATGTTGGTTGGGAC...AAAGTTCCAGTTATTTATATGCCCAACAAATTTCATAGCCTGCTGAACTGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS GCA 72 bp GGCCGGAGCTCAGAGTCCCGCGCGCCGCGTGCGCGCTaGGCGCACCATGGCTCCGTGGCGAGGAGGCGACGC +
Preference number: 6 (lower is better)
Translates to: GRSSESRAPRAR*AHHGSVARRRR
Trigger: GCGTCGCCTCCTCGCCACGGAGCCATGGTGCGCGCAGCGCGCACGCGGCGCGCGGGACTCTGAGCTCCGGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS TCA 72 bp GCGCGCCGCGGGAAGGCTGGCTGGACGCGCGGTACCTaGGACCCTCGCGGCGAGCAGGCTCGACGTCGGCCC +
Preference number: 6 (lower is better)
Translates to: ARRGKAGWTRGT*DPRGEQARRRP
Trigger: GGGCCGACGTCGAGCCTGCTCGCCGCGAGGGTCTCAGGTACCGCGCGTCCAGCCAGCCTTCCCGCGGCGCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS GCA 72 bp CAGGGCTGGCGCAGTCCCGGCGCTAGAGCCGCTACCTaGCCGCTCCGCTTCGGCCGGCTCGCCCGGCCACAG +
Preference number: 6 (lower is better)
Translates to: QGWRSPGARAAT*PLRFGRLARPQ
Trigger: CTGTGGCCGGGCGAGCCGGCCGAAGCGGAGCGGGCAGGTAGCGGCTCTAGCGCCGGGACTGCGCCAGCCCTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS CCA 72 bp CCGCTCCGCTTCGGCCGGCTCGCCCGGCCACAGCCCTaGCAGCAGCGCCGTAGGGAGCACTCAGTGCGCCCC +
Preference number: 6 (lower is better)
Translates to: PLRFGRLARPQP*QQRRREHSVRP
Trigger: GGGGCGCACTGAGTGCTCCCTACGGCGCTGCTGCCAGGGCTGTGGCCGGGCGAGCCGGCCGAAGCGGAGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS CCA 72 bp CGACTCAGAGGCGAGGAGCTCCGGGCCAAAGCCTCATaGCCCGAGGGCGAGGTCGGCGGGGGAGCCCCTTGG +
Preference number: 6 (lower is better)
Translates to: RLRGEELRAKAS*PEGEVGGGAPW
Trigger: CCAAGGGGCTCCCCCGCCGACCTCGCCCTCGGGCCATGAGGCTTTGGCCCGGAGCTCCTCGCCTCTGAGTCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS GCA 72 bp TCCTCCTCCTCCAAGTTTGGCGGCGGCCGCCCCGGCTaGCAGCCGGCGATGTTCCCCTGCTTCCCGACGAGC +
Preference number: 6 (lower is better)
Translates to: SSSSKFGGGRPG*QPAMFPCFPTS
Trigger: GCTCGTCGGGAAGCAGGGGAACATCGCCGGCTGGCAGCCGGGGCGGCCGCCGCCAAACTTGGAGGAGGAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS TCA 72 bp CTTGCTGCGGCAGCATCTCTCGCCTCCTGCGAACTTTaGGCGGCCGGAGGGTCCCGCGGAGCGCCATCCCGG +
Preference number: 6 (lower is better)
Translates to: LAAAASLASCEL*AAGGSRGAPSR
Trigger: CCGGGATGGCGCTCCGCGGGACCCTCCGGCCGCTCAAAGTTCGCAGGAGGCGAGAGATGCTGCCGCAGCAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS CCA 72 bp GCCAGAGTGCAATCAGTGGCCGAGCGGCGCTGGGGCTaGAGCAGGCGGTGCGCGACTCAGAGGCGAGGAGCT +
Preference number: 6 (lower is better)
Translates to: ARVQSVAERRWG*SRRCATQRRGA
Trigger: AGCTCCTCGCCTCTGAGTCGCGCACCGCCTGCTCCAGCCCCAGCGCCGCTCGGCCACTGATTGCACTCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS CCA 72 bp TCAGCGGCCAGAGTGCAATCAGTGGCCGAGCGGCGCTaGGGCTGGAGCAGGCGGTGCGCGACTCAGAGGCGA +
Preference number: 6 (lower is better)
Translates to: SAARVQSVAERR*GWSRRCATQRR
Trigger: TCGCCTCTGAGTCGCGCACCGCCTGCTCCAGCCCCAGCGCCGCTCGGCCACTGATTGCACTCTGGCCGCTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS CCA 72 bp GCGGAGCGCCATCCCGGAGCGCCTGGGTGCCGTCTCTaGGAGAGGATGGGGAGCTTCAGCGGCCAGAGTGCA +
Preference number: 6 (lower is better)
Translates to: AERHPGAPGCRL*ERMGSFSGQSA
Trigger: TGCACTCTGGCCGCTGAAGCTCCCCATCCTCTCCCAGAGACGGCACCCAGGCGCTCCGGGATGGCGCTCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS CCA 72 bp GCCAGGGCAGCCTGGAAGGGTCCACAGTGTGCCTCCTaGGCGAGGCCGGCAGGCAAGTGGCCCAGGCTGTGT +
Preference number: 6 (lower is better)
Translates to: ARAAWKGPQCAS*ARPAGKWPRLC
Trigger: ACACAGCCTGGGCCACTTGCCTGCCGGCCTCGCCCAGGAGGCACACTGTGGACCCTTCCAGGCTGCCCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CAA 90 bp ACGAAGCCGACTTGCTGCGGCAGCATCTCTCGCCTCCTGCGAACTTaGAGCGGCCGGAGGGTCCCGCGGAGCGCCATCCCGGAGCGCCTG +
Preference number: 6 (lower is better)
Translates to: TKPTCCGSISRLLRT*SGRRVPRSAIPERL
Trigger: CAGGCGCTCCGGGATGGCGCTCCGCGGGACCCTCCGGCCGCTCAAAGTTCGCAGGAGGCGAGAGATGCTGCCGCAGCAAGTCGGCTTCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS CAA 72 bp ACTTGCTGCGGCAGCATCTCTCGCCTCCTGCGAACTTaGAGCGGCCGGAGGGTCCCGCGGAGCGCCATCCCG +
Preference number: 6 (lower is better)
Translates to: TCCGSISRLLRT*SGRRVPRSAIP
Trigger: CGGGATGGCGCTCCGCGGGACCCTCCGGCCGCTCAAAGTTCGCAGGAGGCGAGAGATGCTGCCGCAGCAAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS GCA 72 bp TCTCTGGGAGAGGATGGGGAGCTTCAGCGGCCAGAGTaGAATCAGTGGCCGAGCGGCGCTGGGGCTGGAGCA +
Preference number: 6 (lower is better)
Translates to: SLGEDGELQRPE*NQWPSGAGAGA
Trigger: TGCTCCAGCCCCAGCGCCGCTCGGCCACTGATTGCACTCTGGCCGCTGAAGCTCCCCATCCTCTCCCAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS CCA 72 bp ATCCCGGAGCGCCTGGGTGCCGTCTCTGGGAGAGGATaGGGAGCTTCAGCGGCCAGAGTGCAATCAGTGGCC +
Preference number: 6 (lower is better)
Translates to: IPERLGAVSGRG*GASAARVQSVA
Trigger: GGCCACTGATTGCACTCTGGCCGCTGAAGCTCCCCATCCTCTCCCAGAGACGGCACCCAGGCGCTCCGGGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532405.6
CDS GCA 72 bp ACCAGGGCCAGCACCGCGCACACGAAGCCGACTTGCTaGGGCAGCATCTCTCGCCTCCTGCGAACTTTGAGC +
Preference number: 6 (lower is better)
Translates to: TRASTAHTKPTC*GSISRLLRTLS
Trigger: GCTCAAAGTTCGCAGGAGGCGAGAGATGCTGCCGCAGCAAGTCGGCTTCGTGTGCGCGGTGCTGGCCCTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS GCA 72 bp CACACCAGGGCCAGCACCGCGCACACGAAGCCGACTTaGTGCGGCAGCATCTCTCGCCTCCTGCGAACTTTG +
Preference number: 6 (lower is better)
Translates to: HTRASTAHTKPT*CGSISRLLRTL
Trigger: CAAAGTTCGCAGGAGGCGAGAGATGCTGCCGCAGCAAGTCGGCTTCGTGTGCGCGGTGCTGGCCCTGGTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS CCA 72 bp TCCCCTCACCTTGTGAGCTGCCCTAGGCTGTGGTCCTaGCAGCTGGCAGCCACCGGGAAGTCTGGATGCCTG +
Preference number: 6 (lower is better)
Translates to: SPHLVSCPRLWS*QLAATGKSGCL
Trigger: CAGGCATCCAGACTTCCCGGTGGCTGCCAGCTGCCAGGACCACAGCCTAGGGCAGCTCACAAGGTGAGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526482.1
CDS CCA 72 bp TCCCAGCCAGCAACCCGTGCATTCCTTTGGGTGGGGTaGCCACACAGCGACCTGCTTGGAGCTGGGCACAGG +
Preference number: 6 (lower is better)
Translates to: SQPATRAFLWVG*PHSDLLGAGHR
Trigger: CCTGTGCCCAGCTCCAAGCAGGTCGCTGTGTGGCCACCCCACCCAAAGGAATGCACGGGTTGCTGGCTGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CAA 72 bp GCGTGCGGTGGGTGCCGAGAGTCTGGGGCAGCACTCTaGGTGGTGGCGAAGATGCCAGGGGTTATGTGCTGG +
Preference number: 6 (lower is better)
Translates to: ACGGCRESGAAL*VVAKMPGVMCW
Trigger: CCAGCACATAACCCCTGGCATCTTCGCCACCACCAAGAGTGCTGCCCCAGACTCTCGGCACCCACCGCACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 72 bp GCGGTGGGTGCCGAGAGTCTGGGGCAGCACTCTTGGTaGTGGCGAAGATGCCAGGGGTTATGTGCTGGAGAG +
Preference number: 6 (lower is better)
Translates to: AVGAESLGQHSW*WRRCQGLCAGE
Trigger: CTCTCCAGCACATAACCCCTGGCATCTTCGCCACCACCAAGAGTGCTGCCCCAGACTCTCGGCACCCACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 72 bp CGTGCGGTGGGTGCCGAGAGTCTGGGGCAGCACTCTTaGTGGTGGCGAAGATGCCAGGGGTTATGTGCTGGA +
Preference number: 6 (lower is better)
Translates to: RAVGAESLGQHS*WWRRCQGLCAG
Trigger: TCCAGCACATAACCCCTGGCATCTTCGCCACCACCAAGAGTGCTGCCCCAGACTCTCGGCACCCACCGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS TCA 72 bp CAGGCAACTAAGACCCAGGAGAGGAGCCTGCTTGTTTaGGGGTGCACGGTGAGCCGCTGGCTGAGCCCAGTG +
Preference number: 6 (lower is better)
Translates to: QATKTQERSLLV*GCTVSRWLSPV
Trigger: CACTGGGCTCAGCCAGCGGCTCACCGTGCACCCTCAAACAAGCAGGCTCCTCTCCTGGGTCTTAGTTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526482.1
CDS TCA 72 bp CCCATGCCCGGAGTGGCTGCCGGGAAAAGAACTCAATaGCAGCACATTCTCCCAGCAGTCCAGCCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: PMPGVAAGKRTQ*QHILPAVQPQA
Trigger: GGCCTGGGGCTGGACTGCTGGGAGAATGTGCTGTCATTGAGTTCTTTTCCCGGCAGCCACTCCGGGCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS TCA 72 bp CTCCCGGGACAGCTTGTCCTGGTGTCCCCTGACCAATaGCAGAACAAGGGTGTGTGCCCATGCCCGGAGTGG +
Preference number: 6 (lower is better)
Translates to: LPGQLVLVSPDQ*QNKGVCPCPEW
Trigger: CCACTCCGGGCATGGGCACACACCCTTGTTCTGTCATTGGTCAGGGGACACCAGGACAAGCTGTCCCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS GCA 72 bp GTCCCACCCAGGGTGTTACCGGGGGCTCCTTCCTCCTaGTTCAGTCGAGTCTACGCAGGGGACAGTGCAGAA +
Preference number: 6 (lower is better)
Translates to: VPPRVLPGAPSS*FSRVYAGDSAE
Trigger: TTCTGCACTGTCCCCTGCGTAGACTCGACTGAAGCAGGAGGAAGGAGCCCCCGGTAACACCCTGGGTGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 72 bp ACACCCAGCTTCCGGTCCAGTCGCCACTTGTTTAGGTaGATGCCGAGGACGGTGAGAGCGACAGAGCCCAGC +
Preference number: 6 (lower is better)
Translates to: TPSFRSSRHLFR*MPRTVRATEPS
Trigger: GCTGGGCTCTGTCGCTCTCACCGTCCTCGGCATCCACCTAAACAAGTGGCGACTGGACCGGAAGCTGGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393265.6
ENST00000526482.1
ENST00000531433.5
ENST00000532405.6
ENST00000554925.5
ENST00000676001.1
CDS CCA 72 bp CCAGAGATGATTAGCGTGCGGTGGGTGCCGAGAGTCTaGGGCAGCACTCTTGGTGGTGGCGAAGATGCCAGG +
Preference number: 6 (lower is better)
Translates to: PEMISVRWVPRV*GSTLGGGEDAR
Trigger: CCTGGCATCTTCGCCACCACCAAGAGTGCTGCCCCAGACTCTCGGCACCCACCGCACGCTAATCATCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CAA 72 bp CACAGGAGGAAGATGAGGGGCCAGGTGAACACCCACTaGACCTTGTCCCCTCTGGCCTCCGGCACGGAGAAG +
Preference number: 6 (lower is better)
Translates to: HRRKMRGQVNTH*TLSPLASGTEK
Trigger: CTTCTCCGTGCCGGAGGCCAGAGGGGACAAGGTCAAGTGGGTGTTCACCTGGCCCCTCATCTTCCTCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000526482.1
ENST00000531433.5
ENST00000532405.6
ENST00000554925.5
ENST00000676001.1
CDS TCA 72 bp GGGGCCTCTGGCCTTTGGGATGACTCCTGTCCTGGCTaGTTCGATGGCTCTGCTTCCACTCTGAGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: GASGLWDDSCPG*FDGSASTLRSR
Trigger: CCTGCTCCTCAGAGTGGAAGCAGAGCCATCGAATCAGCCAGGACAGGAGTCATCCCAAAGGCCAGAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 72 bp CCTGGCAGCTGGCAGCCACCGGGAAGTCTGGATGCCTaGCTTCAACTCCTCATGTCAGGCAAAGTGGGTCAC +
Preference number: 6 (lower is better)
Translates to: PGSWQPPGSLDA*LQLLMSGKVGH
Trigger: GTGACCCACTTTGCCTGACATGAGGAGTTGAAGCCAGGCATCCAGACTTCCCGGTGGCTGCCAGCTGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526482.1
CDS CCA 72 bp GTGGGTGCCGAGAGTCTGGGGCAGCACTCTTGGTGGTaGCGAAGATGCCAGGGGTTATGTGCTGGAGAGTGT +
Preference number: 6 (lower is better)
Translates to: VGAESLGQHSWW*RRCQGLCAGEC
Trigger: ACACTCTCCAGCACATAACCCCTGGCATCTTCGCCACCACCAAGAGTGCTGCCCCAGACTCTCGGCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 72 bp CAGTGTGTTCTAGGAATGACAGTGAGGAGGCCGCTGTaGCCGGCACGGAGAAGGGGGACAGGAAGTCAGCCT +
Preference number: 6 (lower is better)
Translates to: QCVLGMTVRRPL*PARRRGTGSQP
Trigger: AGGCTGACTTCCTGTCCCCCTTCTCCGTGCCGGCCACAGCGGCCTCCTCACTGTCATTCCTAGAACACACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CAA 90 bp GTGAATGAGGAATGTTTCCTGCAGGGTCCTGGGAGGTCTCCTGGGTaGGCACAGGTGGTGGGTGGCTCTTGGATGGGCATCTGCCACTGG +
Preference number: 6 (lower is better)
Translates to: VNEECFLQGPGRSPG*AQVVGGSWMGICHW
Trigger: CCAGTGGCAGATGCCCATCCAAGAGCCACCCACCACCTGTGCCAACCCAGGAGACCTCCCAGGACCCTGCAGGAAACATTCCTCATTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS GCA 72 bp GTGCATTCCTTTGGGTGGGGTGGCCACACAGCGACCTaGTTGGAGCTGGGCACAGGGAAAGAAACCCCAATG +
Preference number: 6 (lower is better)
Translates to: VHSFGWGGHTAT*LELGTGKETPM
Trigger: CATTGGGGTTTCTTTCCCTGTGCCCAGCTCCAAGCAGGTCGCTGTGTGGCCACCCCACCCAAAGGAATGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 72 bp TTGGGTGGGGTGGCCACACAGCGACCTGCTTGGAGCTaGGCACAGGGAAAGAAACCCCAATGTCATCTCCAG +
Preference number: 6 (lower is better)
Translates to: LGGVATQRPAWS*AQGKKPQCHLQ
Trigger: CTGGAGATGACATTGGGGTTTCTTTCCCTGTGCCCAGCTCCAAGCAGGTCGCTGTGTGGCCACCCCACCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 72 bp TTCCCCAGGATGCCTGCCTCCCGGGACAGCTTGTCCTaGTGTCCCCTGACCAATGACAGAACAAGGGTGTGT +
Preference number: 6 (lower is better)
Translates to: FPRMPASRDSLS*CPLTNDRTRVC
Trigger: ACACACCCTTGTTCTGTCATTGGTCAGGGGACACCAGGACAAGCTGTCCCGGGAGGCAGGCATCCTGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 72 bp GGCCAACAGAAACTGCCAGAGATGATTAGCGTGCGGTaGGTGCCGAGAGTCTGGGGCAGCACTCTTGGTGGT +
Preference number: 6 (lower is better)
Translates to: GQQKLPEMISVR*VPRVWGSTLGG
Trigger: ACCACCAAGAGTGCTGCCCCAGACTCTCGGCACCCACCGCACGCTAATCATCTCTGGCAGTTTCTGTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CAA 90 bp GGAGGGCTGGAGCTCATAATCTCGTCCACCATCACCACGGGGTTCTaGCCATACTGTGGCTTCTCCTTCACTTGCCCCAGCAATGGCACG +
Preference number: 6 (lower is better)
Translates to: GGLELIISSTITTGF*PYCGFSFTCPSNGT
Trigger: CGTGCCATTGCTGGGGCAAGTGAAGGAGAAGCCACAGTATGGCAAGAACCCCGTGGTGATGGTGGACGAGATTATGAGCTCCAGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000532405.6
ENST00000554925.5
ENST00000676001.1
CDS GCA 72 bp GGGTTACCTGAGACAGGGCAGAACAGACTCCCAAAATaGACATGGGAGGAAGCCCCTGCCTTCATCGGCTCC +
Preference number: 6 (lower is better)
Translates to: GLPETGQNRLPK*TWEEAPAFIGS
Trigger: GGAGCCGATGAAGGCAGGGGCTTCCTCCCATGTGCATTTTGGGAGTCTGTTCTGCCCTGTCTCAGGTAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS GCA 72 bp TTCCTCCTGCTTCAGTCGAGTCTACGCAGGGGACAGTaGAGAACAGTGACTCACACATGGCCCTCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: FLLLQSSLRRGQ*RTVTHTWPSGS
Trigger: GCTCCCAGAGGGCCATGTGTGAGTCACTGTTCTGCACTGTCCCCTGCGTAGACTCGACTGAAGCAGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS GCA 72 bp TGTGTGCTCTTGAAGAATCTCCCAGCCAGCAACCCGTaGATTCCTTTGGGTGGGGTGGCCACACAGCGACCT +
Preference number: 6 (lower is better)
Translates to: CVLLKNLPASNP*IPLGGVATQRP
Trigger: AGGTCGCTGTGTGGCCACCCCACCCAAAGGAATGCACGGGTTGCTGGCTGGGAGATTCTTCAAGAGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS GCA 72 bp GCCCCTCACTGCTGCATGAAAGCTCAAATCCCTCCCTaGTCAGAAGCCTCCATCCCAGAGGAAGACGGAACC +
Preference number: 6 (lower is better)
Translates to: APHCCMKAQIPP*SEASIPEEDGT
Trigger: GGTTCCGTCTTCCTCTGGGATGGAGGCTTCTGAGCAGGGAGGGATTTGAGCTTTCATGCAGCAGTGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS GCA 72 bp AGGCAGGAGAATCTCTTGAACCCGGGAAGCGGAGGTTaGAGTCAGCGGAGATCATGCCACTACACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: RQENLLNPGSGG*SQRRSCHYTPA
Trigger: GGCTGGAGTGTAGTGGCATGATCTCCGCTGACTGCAACCTCCGCTTCCCGGGTTCAAGAGATTCTCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 72 bp GAAGCCCAGTGTGTCCCCTTGCTCCAGGACCACTCGTaGGCAATTGATGCTCTTTTCGCCTCTCTTCTGGGG +
Preference number: 6 (lower is better)
Translates to: EAQCVPLLQDHS*AIDALFASLLG
Trigger: CCCCAGAAGAGAGGCGAAAAGAGCATCAATTGCCCACGAGTGGTCCTGGAGCAAGGGGACACACTGGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526482.1
CDS CAA 90 bp GGAGGGCTGGAGCTCATAATCTCGTCCACCATCACCACGGGGTTCTaGCCATACTGTGGCTTCTCCTTCACTGTTGAGCGCAACACCGTG +
Preference number: 6 (lower is better)
Translates to: GGLELIISSTITTGF*PYCGFSFTVERNTV
Trigger: CACGGTGTTGCGCTCAACAGTGAAGGAGAAGCCACAGTATGGCAAGAACCCCGTGGTGATGGTGGACGAGATTATGAGCTCCAGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526482.1
CDS CAA 90 bp GGAGGGCTGGAGCTCATAATCTCGTCCACCATCACCACGGGGTTCTaGCCATACTGTGGCTTCTCCTTCACAGCCTCCAGCTCACTGTTG +
Preference number: 6 (lower is better)
Translates to: GGLELIISSTITTGF*PYCGFSFTASSSLL
Trigger: CAACAGTGAGCTGGAGGCTGTGAAGGAGAAGCCACAGTATGGCAAGAACCCCGTGGTGATGGTGGACGAGATTATGAGCTCCAGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525557.5
ENST00000531433.5
CDS TCA 72 bp GTGCTTTGGGACTCTGCTCCCGGCTGGACCAGATCTTaGGGGTATTCACAGCAAGCCCCTACTATGTGGCCA +
Preference number: 6 (lower is better)
Translates to: VLWDSAPGWTRS*GYSQQAPTMWP
Trigger: TGGCCACATAGTAGGGGCTTGCTGTGAATACCCTCAAGATCTGGTCCAGCCGGGAGCAGAGTCCCAAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS GCA 72 bp TACAGAGCACCAAGGATGTGCAGCAGGACGGCTCCGTaGTGTCGCTCCTTATTGGAGAACAGATCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: YRAPRMCSRTAP*CRSLLENRSVG
Trigger: CCCCACAGATCTGTTCTCCAATAAGGAGCGACAGCACGGAGCCGTCCTGCTGCACATCCTTGGTGCTCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000554461.5
ENST00000676001.1
CDS GCA 72 bp GACAGAACAAGGGTGTGTGCCCATGCCCGGAGTGGCTaGCGGGAAAAGAACTCAATGACAGCACATTCTCCC +
Preference number: 6 (lower is better)
Translates to: DRTRVCAHARSG*REKNSMTAHSP
Trigger: GGGAGAATGTGCTGTCATTGAGTTCTTTTCCCGGCAGCCACTCCGGGCATGGGCACACACCCTTGTTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS GCA 72 bp GGAGATCATGCCACTACACTCCAGCCTAAGGCCATGTaGTGGCTTCATGACAGCTCTGGGCTGGTGCTTTGG +
Preference number: 6 (lower is better)
Translates to: GDHATTLQPKAM*WLHDSSGLVLW
Trigger: CCAAAGCACCAGCCCAGAGCTGTCATGAAGCCAGCACATGGCCTTAGGCTGGAGTGTAGTGGCATGATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 72 bp TGTGCAGCAGGACGGCTCCGTGCTGTCGCTCCTTATTaGAGAACAGATCTGTGGGGAACTCGTGAATCGCAG +
Preference number: 6 (lower is better)
Translates to: CAAGRLRAVAPY*RTDLWGTRESQ
Trigger: CTGCGATTCACGAGTTCCCCACAGATCTGTTCTCCAATAAGGAGCGACAGCACGGAGCCGTCCTGCTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS CCA 72 bp GATCATGCCACTACACTCCAGCCTAAGGCCATGTGCTaGCTTCATGACAGCTCTGGGCTGGTGCTTTGGGAC +
Preference number: 6 (lower is better)
Translates to: DHATTLQPKAMC*LHDSSGLVLWD
Trigger: GTCCCAAAGCACCAGCCCAGAGCTGTCATGAAGCCAGCACATGGCCTTAGGCTGGAGTGTAGTGGCATGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CAA 90 bp TGGAGAGTGTTATTAGCGGGCTCCTTCTATGGGGAGCATCAACACTaGGGGCCTCTGGCCTTTGGGATGACTCCTGTCCTGGCTGATTCG +
Preference number: 6 (lower is better)
Translates to: WRVLLAGSFYGEHQH*GPLAFGMTPVLADS
Trigger: CGAATCAGCCAGGACAGGAGTCATCCCAAAGGCCAGAGGCCCCAAGTGTTGATGCTCCCCATAGAAGGAGCCCGCTAATAACACTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS TCA 72 bp GGTGGGTGGCTCTTGGATGGGCATCTGCCACTGGCCTaGGTGACTCAGCACACAATACTTCTCTTCTTCACC +
Preference number: 6 (lower is better)
Translates to: GGWLLDGHLPLA*VTQHTILLFFT
Trigger: GGTGAAGAAGAGAAGTATTGTGTGCTGAGTCACTCAGGCCAGTGGCAGATGCCCATCCAAGAGCCACCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS TCA 72 bp GAGAACAGCTCGATCGGGCCTGAGAGTGTGTGCTCTTaGAGAATCTCCCAGCCAGCAACCCGTGCATTCCTT +
Preference number: 6 (lower is better)
Translates to: ENSSIGPESVCS*RISQPATRAFL
Trigger: AAGGAATGCACGGGTTGCTGGCTGGGAGATTCTTCAAGAGCACACACTCTCAGGCCCGATCGAGCTGTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS GCA 72 bp GCACTCTTGGTGGTGGCGAAGATGCCAGGGGTTATGTaGTGGAGAGTGTTATTAGCGGGCTCCTTCTATGGG +
Preference number: 6 (lower is better)
Translates to: ALLVVAKMPGVM*WRVLLAGSFYG
Trigger: CCCATAGAAGGAGCCCGCTAATAACACTCTCCAGCACATAACCCCTGGCATCTTCGCCACCACCAAGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 72 bp ACACCCAGCTTCCGGTCCAGTCGCCACTTGTTTAGGTaGATGCCGAGGACATTCCTCCCTGATCCTTCTATC +
Preference number: 6 (lower is better)
Translates to: TPSFRSSRHLFR*MPRTFLPDPSI
Trigger: GATAGAAGGATCAGGGAGGAATGTCCTCGGCATCCACCTAAACAAGTGGCGACTGGACCGGAAGCTGGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525557.5
CDS CCA 72 bp GGTTTCCTCCTTCTATACGGAGAGACTCCTCCCTCTTaGGGGTTACCTGAGACAGGGCAGAACAGACTCCCA +
Preference number: 6 (lower is better)
Translates to: GFLLLYGETPPS*GLPETGQNRLP
Trigger: TGGGAGTCTGTTCTGCCCTGTCTCAGGTAACCCCCAAGAGGGAGGAGTCTCTCCGTATAGAAGGAGGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 72 bp GGGACAGTGCAGAACAGTGACTCACACATGGCCCTCTaGGAGCCTCTTATGATAGGGGCAGTAAAAGTGGGG +
Preference number: 6 (lower is better)
Translates to: GTVQNSDSHMAL*EPLMIGAVKVG
Trigger: CCCCACTTTTACTGCCCCTATCATAAGAGGCTCCCAGAGGGCCATGTGTGAGTCACTGTTCTGCACTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 72 bp CTCTTGGTGGTGGCGAAGATGCCAGGGGTTATGTGCTaGAGAGTGTTATTAGCGGGCTCCTTCTATGGGGAG +
Preference number: 6 (lower is better)
Translates to: LLVVAKMPGVMC*RVLLAGSFYGE
Trigger: CTCCCCATAGAAGGAGCCCGCTAATAACACTCTCCAGCACATAACCCCTGGCATCTTCGCCACCACCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 72 bp TGTGCAGCAGGACGGCTCCGTGCTGTCGCTCCTTATTaGAGAACAGATCTGTGGGGAACTCGTGAATCGATG +
Preference number: 6 (lower is better)
Translates to: CAAGRLRAVAPY*RTDLWGTRESM
Trigger: CATCGATTCACGAGTTCCCCACAGATCTGTTCTCCAATAAGGAGCGACAGCACGGAGCCGTCCTGCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554461.5
CDS CAA 72 bp GAGCTCATAATCTCGTCCACCATCACCACGGGGTTCTaGCCATACTGTGGCTTCTCCTTCACTTGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: ELIISSTITTGF*PYCGFSFTCPS
Trigger: GCTGGGGCAAGTGAAGGAGAAGCCACAGTATGGCAAGAACCCCGTGGTGATGGTGGACGAGATTATGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000532405.6
ENST00000554925.5
ENST00000676001.1
CDS CAA 72 bp TTATTAGCGGGCTCCTTCTATGGGGAGCATCAACACTaGGGGCCTCTGGCCTTTGGGATGACTCCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: LLAGSFYGEHQH*GPLAFGMTPVL
Trigger: CAGGACAGGAGTCATCCCAAAGGCCAGAGGCCCCAAGTGTTGATGCTCCCCATAGAAGGAGCCCGCTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CAA 90 bp CCCAGGCTGTGTTCAAGGCCACCTGAGAAGCACCAGGAGGCTGCTTaGGTGAGCCAAGCCACACAGCCTTTAAGAACGTTTCAGTACTCA +
Preference number: 6 (lower is better)
Translates to: PRLCSRPPEKHQEAA*VSQATQPLRTFQYS
Trigger: TGAGTACTGAAACGTTCTTAAAGGCTGTGTGGCTTGGCTCACCAAAGCAGCCTCCTGGTGCTTCTCAGGTGGCCTTGAACACAGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 72 bp TGGGGAACTCGTGAATCGCAGGATCTGTGCAGTTCTTaGCTGTCTGTGTCCCATTCACTGGGGCCATCAACT +
Preference number: 6 (lower is better)
Translates to: WGTRESQDLCSS*LSVSHSLGPST
Trigger: AGTTGATGGCCCCAGTGAATGGGACACAGACAGCCAAGAACTGCACAGATCCTGCGATTCACGAGTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS CCA 72 bp TATGTGCTGGAGAGTGTTATTAGCGGGCTCCTTCTATaGGGAGCATCAACACTTGGGGCCTCTGGCCTTTGG +
Preference number: 6 (lower is better)
Translates to: YVLESVISGLLL*GASTLGASGLW
Trigger: CCAAAGGCCAGAGGCCCCAAGTGTTGATGCTCCCCATAGAAGGAGCCCGCTAATAACACTCTCCAGCACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CAA 72 bp GAGCTCATAATCTCGTCCACCATCACCACGGGGTTCTaGCCATACTGTGGCTTCTCCTTCACTGTTGAGCGC +
Preference number: 6 (lower is better)
Translates to: ELIISSTITTGF*PYCGFSFTVER
Trigger: GCGCTCAACAGTGAAGGAGAAGCCACAGTATGGCAAGAACCCCGTGGTGATGGTGGACGAGATTATGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526482.1
CDS TCA 72 bp ACATTCCCGTTCTCAATGTTCTCGTGCCTCCCGTTTTaGAGCGGCTTACTGCTCACACCATTGGCCGAGTTG +
Preference number: 6 (lower is better)
Translates to: TFPFSMFSCLPF*SGLLLTPLAEL
Trigger: CAACTCGGCCAATGGTGTGAGCAGTAAGCCGCTTCAAAACGGGAGGCACGAGAACATTGAGAACGGGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000526482.1
ENST00000531433.5
ENST00000532405.6
ENST00000554925.5
ENST00000556739.5
ENST00000676001.1
CDS CCA 72 bp AAACTGCATTCCAGCAAAAGGCAGGTGCAAAGGTCCTaGGGCAGGTGCGCAGTTCTAGGAATGACAGTGTGT +
Preference number: 6 (lower is better)
Translates to: KLHSSKRQVQRS*GRCAVLGMTVC
Trigger: ACACACTGTCATTCCTAGAACTGCGCACCTGCCCCAGGACCTTTGCACCTGCCTTTTGCTGGAATGCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CAA 72 bp TGTTCAAGGCCACCTGAGAAGCACCAGGAGGCTGCTTaGGTGAGCCAAGCCACACAGCCTTTAAGAACGTTT +
Preference number: 6 (lower is better)
Translates to: CSRPPEKHQEAA*VSQATQPLRTF
Trigger: AAACGTTCTTAAAGGCTGTGTGGCTTGGCTCACCAAAGCAGCCTCCTGGTGCTTCTCAGGTGGCCTTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CAA 90 bp GGAGGGCTGGAGCTCATAATCTCGTCCACCATCACCACGGGGTTCTaGCCATACTGTGGCTTCTCCTTCAAATTTAGAAGAGGAGGAGAG +
Preference number: 6 (lower is better)
Translates to: GGLELIISSTITTGF*PYCGFSFKFRRGGE
Trigger: CTCTCCTCCTCTTCTAAATTTGAAGGAGAAGCCACAGTATGGCAAGAACCCCGTGGTGATGGTGGACGAGATTATGAGCTCCAGCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CAA 90 bp TTCCACAGGAACATTCCCGTTCTCAATGTTCTCGTGCCTCCCGTTTaGAAGCGGCTTACTGCTCACACCATTGGCCGAGTTGATCAGTCT +
Preference number: 6 (lower is better)
Translates to: FHRNIPVLNVLVPPV*KRLTAHTIGRVDQS
Trigger: AGACTGATCAACTCGGCCAATGGTGTGAGCAGTAAGCCGCTTCAAAACGGGAGGCACGAGAACATTGAGAACGGGAATGTTCCTGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000526482.1
ENST00000531433.5
ENST00000532405.6
ENST00000554925.5
ENST00000556739.5
ENST00000676001.1
CDS TCA 72 bp ACTGTGGCTTCTCCTTCACTGTTGAGCGCAACACCGTaGTTAGTGCTGATCTCTCTGAGGACAACACCCAAG +
Preference number: 6 (lower is better)
Translates to: TVASPSLLSATP*LVLISLRTTPK
Trigger: CTTGGGTGTTGTCCTCAGAGAGATCAGCACTAATCACGGTGTTGCGCTCAACAGTGAAGGAGAAGCCACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526482.1
CDS CAA 72 bp AACATTCCCGTTCTCAATGTTCTCGTGCCTCCCGTTTaGAAGCGGCTTACTGCTCACACCATTGGCCGAGTT +
Preference number: 6 (lower is better)
Translates to: NIPVLNVLVPPV*KRLTAHTIGRV
Trigger: AACTCGGCCAATGGTGTGAGCAGTAAGCCGCTTCAAAACGGGAGGCACGAGAACATTGAGAACGGGAATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000526482.1
ENST00000531433.5
ENST00000532405.6
ENST00000554925.5
ENST00000556739.5
ENST00000676001.1
CDS CAA 72 bp AACTTTCTATTTCTCCACGTGTCTGGCAGGACACGTTaGCTAGCAGAAGCTGTTTTGTGCCCCAAGCTGCCG +
Preference number: 6 (lower is better)
Translates to: NFLFLHVSGRTR*LAEAVLCPKLP
Trigger: CGGCAGCTTGGGGCACAAAACAGCTTCTGCTAGCAAACGTGTCCTGCCAGACACGTGGAGAAATAGAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS GCA 72 bp AGGTTGTCCTGGAAACGGGCTTCCCCTGGGGTAGTCTaGTCAGCATTTATGAAACACGACACACGAATCAAA +
Preference number: 6 (lower is better)
Translates to: RLSWKRASPGVV*SAFMKHDTRIK
Trigger: TTTGATTCGTGTGTCGTGTTTCATAAATGCTGAGCAGACTACCCCAGGGGAAGCCCGTTTCCAGGACAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CCA 72 bp CACTGGGGCCATCAACTTTCTATTTCTCCACGTGTCTaGCAGGACACGTTTGCTAGCAGAAGCTGTTTTGTG +
Preference number: 6 (lower is better)
Translates to: HWGHQLSISPRV*QDTFASRSCFV
Trigger: CACAAAACAGCTTCTGCTAGCAAACGTGTCCTGCCAGACACGTGGAGAAATAGAAAGTTGATGGCCCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS CCA 72 bp ATCTGTGCAGTTCTTGGCTGTCTGTGTCCCATTCACTaGGGCCATCAACTTTCTATTTCTCCACGTGTCTGG +
Preference number: 6 (lower is better)
Translates to: ICAVLGCLCPIH*GHQLSISPRVW
Trigger: CCAGACACGTGGAGAAATAGAAAGTTGATGGCCCCAGTGAATGGGACACAGACAGCCAAGAACTGCACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000531433.5
ENST00000532405.6
ENST00000676001.1
CDS CCA 72 bp ACTCGTGGGCAATTGATGCTCTTTTCGCCTCTCTTCTaGGGCCCAGTCTTGGCTAATTACAAGGGTCTTTCA +
Preference number: 6 (lower is better)
Translates to: TRGQLMLFSPLF*GPVLANYKGLS
Trigger: TGAAAGACCCTTGTAATTAGCCAAGACTGGGCCCCAGAAGAGAGGCGAAAAGAGCATCAATTGCCCACGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526482.1
CDS CAA 90 bp CGTGGGCAATTGATGCTCTTTTCGCCTCTCTTCTGGGGCCCAGTCTaGGCTAATTACAAGGGTCTTTCAGTTCGTTATCTAAGCCTTACC +
Preference number: 6 (lower is better)
Translates to: RGQLMLFSPLFWGPV*ANYKGLSVRYLSLT
Trigger: GGTAAGGCTTAGATAACGAACTGAAAGACCCTTGTAATTAGCCAAGACTGGGCCCCAGAAGAGAGGCGAAAAGAGCATCAATTGCCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526482.1
CDS GCA 72 bp ACCAGCCTCCAGCTCACTGTTGACCGGGTTACCGTTTaGAATGCTCTTTTGTTTGACTGTGAAAAAGGCTTG +
Preference number: 6 (lower is better)
Translates to: TSLQLTVDRVTV*NALLFDCEKGL
Trigger: CAAGCCTTTTTCACAGTCAAACAAAAGAGCATTGCAAACGGTAACCCGGTCAACAGTGAGCTGGAGGCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393265.6
ENST00000532405.6
ENST00000554925.5
ENST00000676001.1
CDS GCA 72 bp CACAGCCTCCAGCTCACTGTTGACCGGGTTACCGTTTaGAATGCTCTTTTGTTTGACTGTGAAAAAGGCTTG +
Preference number: 6 (lower is better)
Translates to: HSLQLTVDRVTV*NALLFDCEKGL
Trigger: CAAGCCTTTTTCACAGTCAAACAAAAGAGCATTGCAAACGGTAACCCGGTCAACAGTGAGCTGGAGGCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525557.5
ENST00000531433.5
CDS CCA 72 bp AGGGCTATAAAAATGGATAGGACTGTCCCTCTGCACTaGTTACCAGCTCCTGGTGTGTCCTTTACGGGTTTT +
Preference number: 6 (lower is better)
Translates to: RAIKMDRTVPLH*LPAPGVSFTGF
Trigger: AAAACCCGTAAAGGACACACCAGGAGCTGGTAACCAGTGCAGAGGGACAGTCCTATCCATTTTTATAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526482.1
CDS CAA 72 bp GAGCTCATAATCTCGTCCACCATCACCACGGGGTTCTaGCCATACTGTGGCTTCTCCTTCAAATTTAGAAGA +
Preference number: 6 (lower is better)
Translates to: ELIISSTITTGF*PYCGFSFKFRR
Trigger: TCTTCTAAATTTGAAGGAGAAGCCACAGTATGGCAAGAACCCCGTGGTGATGGTGGACGAGATTATGAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556739.5
CDS CAA 72 bp TTGATGCTCTTTTCGCCTCTCTTCTGGGGCCCAGTCTaGGCTAATTACAAGGGTCTTTCAGTTCGTTATCTA +
Preference number: 6 (lower is better)
Translates to: LMLFSPLFWGPV*ANYKGLSVRYL
Trigger: TAGATAACGAACTGAAAGACCCTTGTAATTAGCCAAGACTGGGCCCCAGAAGAGAGGCGAAAAGAGCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526482.1
CDS CAA 90 bp AGCCTCCAGCTCACTGTTGACCGGGTTACCGTTTGCAATGCTCTTTaGTTTGACTGTGAAAAAGGCTTGCATCTTCACATTGTACTTCAT +
Preference number: 6 (lower is better)
Translates to: SLQLTVDRVTVCNAL*FDCEKGLHLHIVLH
Trigger: ATGAAGTACAATGTGAAGATGCAAGCCTTTTTCACAGTCAAACAAAAGAGCATTGCAAACGGTAACCCGGTCAACAGTGAGCTGGAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000554925.5
ENST00000676001.1
CDS CAA 90 bp TCCAGCTCACTGTTGACCGGGTTACCGTTTGCAATGCTCTTTTGTTaGACTGTGAAAAAGGCTTGCATCTTCACATTGTACTTCATGATC +
Preference number: 6 (lower is better)
Translates to: SSSLLTGLPFAMLFC*TVKKACIFTLYFMI
Trigger: GATCATGAAGTACAATGTGAAGATGCAAGCCTTTTTCACAGTCAAACAAAAGAGCATTGCAAACGGTAACCCGGTCAACAGTGAGCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000393265.6
ENST00000525557.5
ENST00000531433.5
ENST00000532405.6
ENST00000554925.5
ENST00000676001.1
CDS CAA 90 bp CTACGAGGCCACCTGCTCTGTCTGCAGGACAGAATGCTTGTAACTTaGTTCTTTATAAGGGCAAGTAGTGAGGTCAAAGATTTAGATCAT +
Preference number: 6 (lower is better)
Translates to: LRGHLLCLQDRMLVT*FFIRASSEVKDLDH
Trigger: ATGATCTAAATCTTTGACCTCACTACTTGCCCTTATAAAGAACAAAGTTACAAGCATTCTGTCCTGCAGACAGAGCAGGTGGCCTCGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526482.1
CDS CAA 72 bp CACCTGCTCTGTCTGCAGGACAGAATGCTTGTAACTTaGTTCTTTATAAGGGCAAGTAGTGAGGTCAAAGAT +
Preference number: 6 (lower is better)
Translates to: HLLCLQDRMLVT*FFIRASSEVKD
Trigger: ATCTTTGACCTCACTACTTGCCCTTATAAAGAACAAAGTTACAAGCATTCTGTCCTGCAGACAGAGCAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526482.1