RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC24A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000185052

Ensembl transcript IDs: ENST00000328041.11

Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGAAGGGAGGGGTGCAGCTGGGCCGGCTTGGCGGAGGCGCCCCGTaGGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTCCAGTGT +
Preference number: 1 (lower is better)
Translates to: RKGGVQLGRLGGGAP*GRTFAQEPVVRVQC
Trigger: ACACTGGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAAGCCGGCCCAGCTGCACCCCTCCCTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR GCA 90 bp GCAGCTGGGCCGGCTTGGCGGAGGCGCCCCGTGAGGAAGGACGTTTaGCCAAGAGCCAGTGGTCAGGGTCCAGTGTACTCAATACCAAGT +
Preference number: 1 (lower is better)
Translates to: AAGPAWRRRPVRKDV*PRASGQGPVYSIPS
Trigger: ACTTGGTATTGAGTACACTGGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAAGCCGGCCCAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR CCA 90 bp TTGGCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTaGTCAGGGTCCAGTGTACTCAATACCAAGTGGCAAATTGGGACT +
Preference number: 1 (lower is better)
Translates to: LAEAPREEGRLPKSQ*SGSSVLNTKWQIGT
Trigger: AGTCCCAATTTGCCACTTGGTATTGAGTACACTGGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR GCA 90 bp AGTGCGCTTCTCTCCATTTTCCAAGAAACCAGTGTCTGTAACTCCTaGATGAAAAGCAGTGGTGGCCTCTGGGTCACTCCCTGTCACCCC +
Preference number: 1 (lower is better)
Translates to: SALLSIFQETSVCNS*MKSSGGLWVTPCHP
Trigger: GGGGTGACAGGGAGTGACCCAGAGGCCACCACTGCTTTTCATGCAGGAGTTACAGACACTGGTTTCTTGGAAAATGGAGAGAAGCGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR CCA 90 bp CTCAGTCACTGTTCAAAAATGGAGCTGGAAAAGTCACGTGGATGTTaGATGTCTTCACACGGAGGAGGCAGGAAAGGGTGGGTGGGCATG +
Preference number: 1 (lower is better)
Translates to: LSHCSKMELEKSRGC*MSSHGGGRKGWVGM
Trigger: CATGCCCACCCACCCTTTCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGCTCCATTTTTGAACAGTGACTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR TCA 90 bp GGGATGCAAGCCCAGACAACACGGCAGGTGCAGCCTTTGGGTAATTaGTTAATCCAGAGCCCAGTGGAAGAAGATGCAAGAGAAGCTCTT +
Preference number: 1 (lower is better)
Translates to: GMQAQTTRQVQPLGN*LIQSPVEEDAREAL
Trigger: AAGAGCTTCTCTTGCATCTTCTTCCACTGGGCTCTGGATTAATCAATTACCCAAAGGCTGCACCTGCCGTGTTGTCTGGGCTTGCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR TCA 90 bp CGCTTCTCTCCATTTTCCAAGAAACCAGTGTCTGTAACTCCTGCATaGAAAGCAGTGGTGGCCTCTGGGTCACTCCCTGTCACCCCAAAT +
Preference number: 1 (lower is better)
Translates to: RFSPFSKKPVSVTPA*KAVVASGSLPVTPN
Trigger: ATTTGGGGTGACAGGGAGTGACCCAGAGGCCACCACTGCTTTTCATGCAGGAGTTACAGACACTGGTTTCTTGGAAAATGGAGAGAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR CCA 90 bp GAAACCAGTGTCTGTAACTCCTGCATGAAAAGCAGTGGTGGCCTCTaGGTCACTCCCTGTCACCCCAAATGCCAAACAACAAGAGCACAT +
Preference number: 1 (lower is better)
Translates to: ETSVCNSCMKSSGGL*VTPCHPKCQTTRAH
Trigger: ATGTGCTCTTGTTGTTTGGCATTTGGGGTGACAGGGAGTGACCCAGAGGCCACCACTGCTTTTCATGCAGGAGTTACAGACACTGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR CCA 90 bp GAGCCAGTGGTCAGGGTCCAGTGTACTCAATACCAAGTGGCAAATTaGGACTTAATTGACGACGTCTGTGCAAAGTGCGCTTCTCTCCAT +
Preference number: 1 (lower is better)
Translates to: EPVVRVQCTQYQVAN*DLIDDVCAKCASLH
Trigger: ATGGAGAGAAGCGCACTTTGCACAGACGTCGTCAATTAAGTCCCAATTTGCCACTTGGTATTGAGTACACTGGACCCTGACCACTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR GCA 90 bp CCTCTAAAAAGCACTACATCCATGCATACTCCAACACATCTGGGATaGAAGCCCAGACAACACGGCAGGTGCAGCCTTTGGGTAATTGAT +
Preference number: 1 (lower is better)
Translates to: PLKSTTSMHTPTHLG*KPRQHGRCSLWVID
Trigger: ATCAATTACCCAAAGGCTGCACCTGCCGTGTTGTCTGGGCTTGCATCCCAGATGTGTTGGAGTATGCATGGATGTAGTGCTTTTTAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR CCA 90 bp CTAGAATCTCAGTCACTGTTCAAAAATGGAGCTGGAAAAGTCACGTaGATGTTGGATGTCTTCACACGGAGGAGGCAGGAAAGGGTGGGT +
Preference number: 1 (lower is better)
Translates to: LESQSLFKNGAGKVT*MLDVFTRRRQERVG
Trigger: ACCCACCCTTTCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGCTCCATTTTTGAACAGTGACTGAGATTCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR GCA 90 bp GGCGTCCTTGGCTATAAAATGTCATGCATTTGTTCTTGGTGGCCTTaGCCAGTGGCTCCTCTAAAAAGCACTACATCCATGCATACTCCA +
Preference number: 1 (lower is better)
Translates to: GVLGYKMSCICSWWP*PVAPLKSTTSMHTP
Trigger: TGGAGTATGCATGGATGTAGTGCTTTTTAGAGGAGCCACTGGGCAAGGCCACCAAGAACAAATGCATGACATTTTATAGCCAAGGACGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR TCA 90 bp CAGGGTCCAGTGTACTCAATACCAAGTGGCAAATTGGGACTTAATTaGCGACGTCTGTGCAAAGTGCGCTTCTCTCCATTTTCCAAGAAA +
Preference number: 1 (lower is better)
Translates to: QGPVYSIPSGKLGLN*RRLCKVRFSPFSKK
Trigger: TTTCTTGGAAAATGGAGAGAAGCGCACTTTGCACAGACGTCGTCAATTAAGTCCCAATTTGCCACTTGGTATTGAGTACACTGGACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR TCA 90 bp CAAGGGACAGCACGGGCAAGAATCCACAGTTTCAATAAATACAAGTaGACAAGCATGGTGTGTCTCAACTGGGTGGAATTAGTCTGCATA +
Preference number: 1 (lower is better)
Translates to: QGTARARIHSFNKYK*TSMVCLNWVELVCI
Trigger: TATGCAGACTAATTCCACCCAGTTGAGACACACCATGCTTGTTCACTTGTATTTATTGAAACTGTGGATTCTTGCCCGTGCTGTCCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR TCA 90 bp AATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATAAGTaGTCAGTGCTTAAAGTAAATACAAGGGACAGCACGGGCAAGAAT +
Preference number: 1 (lower is better)
Translates to: NVYKGQGKPYRMNDK*SVLKVNTRDSTGKN
Trigger: ATTCTTGCCCGTGCTGTCCCTTGTATTTACTTTAAGCACTGATCACTTATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR GCA 90 bp CACTATCCGTCCAAGAAAACAATCGCCATAAACCAGTGCAAAATGTaGAACAGAATCAATAAGTGTGTCTTAGCTCTGAGAGCCCAAATT +
Preference number: 1 (lower is better)
Translates to: HYPSKKTIAINQCKM*NRINKCVLALRAQI
Trigger: AATTTGGGCTCTCAGAGCTAAGACACACTTATTGATTCTGTTGCACATTTTGCACTGGTTTATGGCGATTGTTTTCTTGGACGGATAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR TCA 90 bp ATAATAATTCAGCATCATACAAAATCTAGCAGGGCTGTTGAGCAGTaGTTGGCAAAAACGTTCACAATAACTTATGCCCTTGAGCGAGTC +
Preference number: 1 (lower is better)
Translates to: IIIQHHTKSSRAVEQ*LAKTFTITYALERV
Trigger: GACTCGCTCAAGGGCATAAGTTATTGTGAACGTTTTTGCCAATCACTGCTCAACAGCCCTGCTAGATTTTGTATGATGCTGAATTATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR CAA 90 bp TGCAGCTGGGCCGGCTTGGCGGAGGCGCCCCGTGAGGAAGGACGTTaGCCCAAGAGCCAGTGGTCAGGGTCCAGTGTACTCAATACCAAG +
Preference number: 2 (lower is better)
Translates to: CSWAGLAEAPREEGR*PKSQWSGSSVLNTK
Trigger: CTTGGTATTGAGTACACTGGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAAGCCGGCCCAGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR TCA 90 bp GAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTCCAGTCAGAAAAGAAGGAGCTaGGCCTCTGTGGGCACCCGG +
Preference number: 2 (lower is better)
Translates to: EAPREEGRLPKSQWSGSSQKRRS*ASVGTR
Trigger: CCGGGTGCCCACAGAGGCTCAGCTCCTTCTTTTCTG...ACTGGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CCA 90 bp TTGGCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGCTGCATGAAAAGCAGTaGTGGCCTCTGGGTCACTCC +
Preference number: 2 (lower is better)
Translates to: LAEAPREEGRLPKSQWSGLHEKQ*WPLGHS
Trigger: GGAGTGACCCAGAGGCCACCACTGCTTTTCATGCAG...CCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR GCA 90 bp TTTCTTCTCCTGTTCCTCAGTTGGGCACGTGCCCCATCCGTTAATGCTGGTTCGCCAGGAAGGGAGGGGTaGAGCTGGGCCGGCTTGGCG +
Preference number: 2 (lower is better)
Translates to: FLLLFLSWARAPSVNAGSPGREG*SWAGLA
Trigger: CGCCAAGCCGGCCCAGCTGCACCCCTCCCTTCCTGG...CGAACCAGCATTAACGGATGGGGCACGTGCCCAACTGAGGAACAGGAGAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CCA 90 bp GGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGTCCAAGGCAGGGGTCAGGGGAGAGCCTaGGCCACCAAAACAGGAGCG +
Preference number: 2 (lower is better)
Translates to: GSSWMGSLFNWGPLVQGRGQGRA*ATKTGA
Trigger: CGCTCCTGTTTTGGTGGCCCAGGCTCTCCCCTGACC...CCTGCCTTGGACAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR TCA 90 bp ACATCCATGCATACTCCAACACATCTGGGATGCAAGCCCAGACAACACGGCAGGAAGGGTGGGTGGGCATaGCCCAAGGAGGTGGGGGAG +
Preference number: 2 (lower is better)
Translates to: TSMHTPTHLGCKPRQHGRKGGWA*PKEVGE
Trigger: CTCCCCCACCTCCTTGGGTCATGCCCACCCACCCTT...CCTGCCGTGTTGTCTGGGCTTGCATCCCAGATGTGTTGGAGTATGCATGGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR GCA 90 bp TTGGCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGAGACAACACGGCAGGTaGAGCCTTTGGGTAATTGAT +
Preference number: 2 (lower is better)
Translates to: LAEAPREEGRLPKSQWSGRQHGR*SLWVID
Trigger: ATCAATTACCCAAAGGCTGCACCTGCCGTGTTGTCT...CCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CCA 90 bp TTGGCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGAAGTCACGTGGATGTTaGATGTCTTCACACGGAGGA +
Preference number: 2 (lower is better)
Translates to: LAEAPREEGRLPKSQWSGKSRGC*MSSHGG
Trigger: TCCTCCGTGTGAAGACATCCAACATCCACGTGACTT...CCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR GCA 90 bp TTTGACTGCCTGGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGCTGTGTGACTCGGGGTaGGGCCGGGTCTCGTATTGC +
Preference number: 2 (lower is better)
Translates to: FDCLAAHGWVVCLTGAPLLCDSG*GRVSYC
Trigger: GCAATACGAGACCCGGCCGCACCCCGAGTCACACAG...CAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCCAGGCAGTCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CCA 90 bp GGCCTCTGGGTCACTCCCTGTCACCCCAAATGCCAAACAACAAGAGCACATCTCCATGACCCAAGGAGGTaGGGGAGCGAGGATGGGTCA +
Preference number: 2 (lower is better)
Translates to: GLWVTPCHPKCQTTRAHLHDPRR*GSEDGS
Trigger: TGACCCATCCTCGCTCCCCCACCTCCTTGGGTCATG...GAGATGTGCTCTTGTTGTTTGGCATTTGGGGTGACAGGGAGTGACCCAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CCA 90 bp TTGGCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTACCAAGTGGCAAATTaGGACTTAATTGACGACGTC +
Preference number: 2 (lower is better)
Translates to: LAEAPREEGRLPKSQWSGYQVAN*DLIDDV
Trigger: GACGTCGTCAATTAAGTCCCAATTTGCCACTTGGTA...CCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR GCA 90 bp GGCCTCTGGGTCACTCCCTGTCACCCCAAATGCCAAACAACAAGAGCACATCTCGGCCGGGTCTCGTATTaGACAGAAAAGAAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: GLWVTPCHPKCQTTRAHLGRVSY*TEKKEL
Trigger: CAGCTCCTTCTTTTCTGTGCAATACGAGACCCGGCC...GAGATGTGCTCTTGTTGTTTGGCATTTGGGGTGACAGGGAGTGACCCAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR GCA 90 bp GTGGCCTCTGGGTCACTCCCTGTCACCCCAAATGCCAAACAACAAGAGCACATCTGTTCTTGGTGGCCTTaGCCAGTGGCTCCTCTAAAA +
Preference number: 2 (lower is better)
Translates to: VASGSLPVTPNAKQQEHICSWWP*PVAPLK
Trigger: TTTTAGAGGAGCCACTGGGCAAGGCCACCAAGAACA...GATGTGCTCTTGTTGTTTGGCATTTGGGGTGACAGGGAGTGACCCAGAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR CAA 90 bp TCTCAGTCACTGTTCAAAAATGGAGCTGGAAAAGTCACGTGGATGTaGGATGTCTTCACACGGAGGAGGCAGGAAAGGGTGGGTGGGCAT +
Preference number: 2 (lower is better)
Translates to: SQSLFKNGAGKVTWM*DVFTRRRQERVGGH
Trigger: ATGCCCACCCACCCTTTCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGCTCCATTTTTGAACAGTGACTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR TCA 90 bp TTTGACTGCCTGGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGCAGCCTTTGGGTAATTaGTTAATCCAGAGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: FDCLAAHGWVVCLTGAPLQPLGN*LIQSPV
Trigger: CACTGGGCTCTGGATTAATCAATTACCCAAAGGCTG...CAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCCAGGCAGTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR GCA 90 bp CATTCTGTGGTTTCAAAGGTGTCAGTTCTCTGTTTTCTCCTTCCCTGGCCATCCCCAACACATCTGGGATaGAAGCCCAGACAACACGGC +
Preference number: 2 (lower is better)
Translates to: HSVVSKVSVLCFLLPWPSPTHLG*KPRQHG
Trigger: GCCGTGTTGTCTGGGCTTGCATCCCAGATGTGTTGG...GGATGGCCAGGGAAGGAGAAAACAGAGAACTGACACCTTTGAAACCACAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CCA 90 bp ACATCCATGCATACTCCAACACATCTGGGATGCAAGCCCAGACAACACGGCAGGAAAAGGAGGAGGGATTaGAATCAGTGTTGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: TSMHTPTHLGCKPRQHGRKRRRD*NQCCLA
Trigger: AGCCAGGCAACACTGATTCCAATCCCTCCTCCTTTT...CCTGCCGTGTTGTCTGGGCTTGCATCCCAGATGTGTTGGAGTATGCATGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR GCA 90 bp TTTCTTCTCCTGTTCCTCAGTTGGGCACGTGCCCCATCCGTTAATGCTGGTTCGGGCTATAAAATGTCATaGATTTGTTCTTGGTGGCCT +
Preference number: 2 (lower is better)
Translates to: FLLLFLSWARAPSVNAGSGYKMS*ICSWWP
Trigger: AGGCCACCAAGAACAAATGCATGACATTTTATAGCC...CGAACCAGCATTAACGGATGGGGCACGTGCCCAACTGAGGAACAGGAGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR GCA 90 bp CATTCTGTGGTTTCAAAGGTGTCAGTTCTCTGTTTTCTCCTTCCCTGGCCATCCAAAGCACTACATCCATaGATACTCCAACACATCTGG +
Preference number: 2 (lower is better)
Translates to: HSVVSKVSVLCFLLPWPSKALHP*ILQHIW
Trigger: CCAGATGTGTTGGAGTATGCATGGATGTAGTGCTTT...GGATGGCCAGGGAAGGAGAAAACAGAGAACTGACACCTTTGAAACCACAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CCA 90 bp AATTCATACCAGAATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATGGAATCAGTGTTGCCTaGCTCAGGCCAGTTAGCAGC +
Preference number: 2 (lower is better)
Translates to: NSYQNVYKGQGKPYRMNDGISVA*LRPVSS
Trigger: GCTGCTAACTGGCCTGAGCCAGGCAACACTGATTCC...ATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATTCTGGTATGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CCA 90 bp AATTCATACCAGAATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATGGTAGTTTGTTTAACTaGGGCCCCCTTGTCCAAGGC +
Preference number: 2 (lower is better)
Translates to: NSYQNVYKGQGKPYRMNDGSLFN*GPLVQG
Trigger: GCCTTGGACAAGGGGGCCCCAGTTAAACAAACTACC...ATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATTCTGGTATGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR TCA 90 bp AATTCATACCAGAATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATTCTGTAACTCCTGCATaGAAAGCAGTGGTGGCCTCT +
Preference number: 2 (lower is better)
Translates to: NSYQNVYKGQGKPYRMNDSVTPA*KAVVAS
Trigger: AGAGGCCACCACTGCTTTTCATGCAGGAGTTACAGA...ATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATTCTGGTATGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CCA 90 bp AATTCATACCAGAATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATTCATGCATTTGTTCTTaGTGGCCTTGCCCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: NSYQNVYKGQGKPYRMNDSCICS*WPCPVA
Trigger: AGCCACTGGGCAAGGCCACCAAGAACAAATGCATGA...ATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATTCTGGTATGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CCA 90 bp AATTCATACCAGAATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATATACTCCAACACATCTaGGATGCAAGCCCAGACAAC +
Preference number: 2 (lower is better)
Translates to: NSYQNVYKGQGKPYRMNDILQHI*DASPDN
Trigger: GTTGTCTGGGCTTGCATCCCAGATGTGTTGGAGTAT...ATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATTCTGGTATGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CCA 90 bp AATTCATACCAGAATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATGTCACTGTTCAAAAATaGAGCTGGAAAAGTCACGTG +
Preference number: 2 (lower is better)
Translates to: NSYQNVYKGQGKPYRMNDVTVQK*SWKSHV
Trigger: CACGTGACTTTTCCAGCTCCATTTTTGAACAGTGAC...ATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATTCTGGTATGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CCA 90 bp AATTCATACCAGAATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATATGGTGTGTCTCAACTaGGTGGAATTAGTCTGCATA +
Preference number: 2 (lower is better)
Translates to: NSYQNVYKGQGKPYRMNDMVCLN*VELVCI
Trigger: TATGCAGACTAATTCCACCCAGTTGAGACACACCAT...ATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATTCTGGTATGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CCA 90 bp AATTCATACCAGAATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATGTTCAAAAATGGAGCTaGAAAAGTCACGTGGATGTT +
Preference number: 2 (lower is better)
Translates to: NSYQNVYKGQGKPYRMNDVQKWS*KSHVDV
Trigger: AACATCCACGTGACTTTTCCAGCTCCATTTTTGAAC...ATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATTCTGGTATGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CCA 90 bp AGTAAATACAAGGGACAGCACGGGCAAGAATCCACAGTTTCAATAAATACAAGTGAAGCTCTTGATCTCTaGAAGAAAAGGAGTAAAAGG +
Preference number: 2 (lower is better)
Translates to: SKYKGQHGQESTVSINTSEALDL*KKRSKR
Trigger: CCTTTTACTCCTTTTCTTCCAGAGATCAAGAGCTTC...ACTTGTATTTATTGAAACTGTGGATTCTTGCCCGTGCTGTCCCTTGTATTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR TCA 90 bp AGTAAATACAAGGGACAGCACGGGCAAGAATCCACAGTTTCAATAAATACAAGTAGGTCACAAATTAGGTaGGTCTTCCATCAAATAACT +
Preference number: 2 (lower is better)
Translates to: SKYKGQHGQESTVSINTSRSQIR*VFHQIT
Trigger: AGTTATTTGATGGAAGACTCACCTAATTTGTGACCT...ACTTGTATTTATTGAAACTGTGGATTCTTGCCCGTGCTGTCCCTTGTATTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR TCA 72 bp GGGGTGCAGCTGGGCCGGCTTGGCGGAGGCGCCCCGTaGGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGG +
Preference number: 3 (lower is better)
Translates to: GVQLGRLGGGAP*GRTFAQEPVVR
Trigger: CCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAAGCCGGCCCAGCTGCACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR GCA 72 bp CCGGCTTGGCGGAGGCGCCCCGTGAGGAAGGACGTTTaGCCAAGAGCCAGTGGTCAGGGTCCAGTGTACTCA +
Preference number: 3 (lower is better)
Translates to: PAWRRRPVRKDV*PRASGQGPVYS
Trigger: TGAGTACACTGGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAAGCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CAA 90 bp TTTGACTGCCTGGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGCGGCCGGGTCTCGTATaGCACAGAAAAGAAGGAGCT +
Preference number: 3 (lower is better)
Translates to: FDCLAAHGWVVCLTGAPLRPGLV*HRKEGA
Trigger: AGCTCCTTCTTTTCTGTGCAATACGAGACCCGGCCG...CAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCCAGGCAGTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR GCA 72 bp AGCACTACATCCATGCATACTCCAACACATCTGGGATaGAAGCCCAGACAACACGGCAGGTGCAGCCTTTGG +
Preference number: 3 (lower is better)
Translates to: STTSMHTPTHLG*KPRQHGRCSLW
Trigger: CCAAAGGCTGCACCTGCCGTGTTGTCTGGGCTTGCATCCCAGATGTGTTGGAGTATGCATGGATGTAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR CCA 72 bp CTGCCTGGCAGCTCATGGATGGGTAGTTTGTTTAACTaGGGCCCCCTTGTCCAAGGCAGGCTAGAACTATTG +
Preference number: 3 (lower is better)
Translates to: LPGSSWMGSLFN*GPLVQGRLELL
Trigger: CAATAGTTCTAGCCTGCCTTGGACAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCCAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CAA 90 bp GGCCTCTGGGTCACTCCCTGTCACCCCAAATGCCAAACAACAAGAGCACATCTCAAAGTCACGTGGATGTaGGATGTCTTCACACGGAGG +
Preference number: 3 (lower is better)
Translates to: GLWVTPCHPKCQTTRAHLKVTWM*DVFTRR
Trigger: CCTCCGTGTGAAGACATCCAACATCCACGTGACTTT...GAGATGTGCTCTTGTTGTTTGGCATTTGGGGTGACAGGGAGTGACCCAGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR CCA 72 bp GTCTGTAACTCCTGCATGAAAAGCAGTGGTGGCCTCTaGGTCACTCCCTGTCACCCCAAATGCCAAACAACA +
Preference number: 3 (lower is better)
Translates to: VCNSCMKSSGGL*VTPCHPKCQTT
Trigger: TGTTGTTTGGCATTTGGGGTGACAGGGAGTGACCCAGAGGCCACCACTGCTTTTCATGCAGGAGTTACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR TCA 72 bp GCCCAGACAACACGGCAGGTGCAGCCTTTGGGTAATTaGTTAATCCAGAGCCCAGTGGAAGAAGATGCAAGA +
Preference number: 3 (lower is better)
Translates to: AQTTRQVQPLGN*LIQSPVEEDAR
Trigger: TCTTGCATCTTCTTCCACTGGGCTCTGGATTAATCAATTACCCAAAGGCTGCACCTGCCGTGTTGTCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR GCA 72 bp CTCTCCATTTTCCAAGAAACCAGTGTCTGTAACTCCTaGATGAAAAGCAGTGGTGGCCTCTGGGTCACTCCC +
Preference number: 3 (lower is better)
Translates to: LSIFQETSVCNS*MKSSGGLWVTP
Trigger: GGGAGTGACCCAGAGGCCACCACTGCTTTTCATGCAGGAGTTACAGACACTGGTTTCTTGGAAAATGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR CCA 72 bp TGTTCAAAAATGGAGCTGGAAAAGTCACGTGGATGTTaGATGTCTTCACACGGAGGAGGCAGGAAAGGGTGG +
Preference number: 3 (lower is better)
Translates to: CSKMELEKSRGC*MSSHGGGRKGW
Trigger: CCACCCTTTCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGCTCCATTTTTGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CAA 90 bp CAAAGTGCGCTTCTCTCCATTTTCCAAGAAACCAGTGTCTGTAACTCCTGCATGTTTAGCGAGGCGTCCTaGGCTATAAAATGTCATGCA +
Preference number: 3 (lower is better)
Translates to: QSALLSIFQETSVCNSCMFSEAS*AIKCHA
Trigger: TGCATGACATTTTATAGCCAAGGACGCCTCGCTAAA...CATGCAGGAGTTACAGACACTGGTTTCTTGGAAAATGGAGAGAAGCGCACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR GCA 72 bp GGCTATAAAATGTCATGCATTTGTTCTTGGTGGCCTTaGCCAGTGGCTCCTCTAAAAAGCACTACATCCATG +
Preference number: 3 (lower is better)
Translates to: GYKMSCICSWWP*PVAPLKSTTSM
Trigger: CATGGATGTAGTGCTTTTTAGAGGAGCCACTGGGCAAGGCCACCAAGAACAAATGCATGACATTTTATAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR-3UTR CAA 90 bp AATTCATACCAGAATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATTTGTTCTTGGTGGCCTaGCCCAGTGGCTCCTCTAAA +
Preference number: 3 (lower is better)
Translates to: NSYQNVYKGQGKPYRMNDLFLVA*PSGSSK
Trigger: TTTAGAGGAGCCACTGGGCAAGGCCACCAAGAACAA...ATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATTCTGGTATGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR TCA 72 bp GTGTACTCAATACCAAGTGGCAAATTGGGACTTAATTaGCGACGTCTGTGCAAAGTGCGCTTCTCTCCATTT +
Preference number: 3 (lower is better)
Translates to: VYSIPSGKLGLN*RRLCKVRFSPF
Trigger: AAATGGAGAGAAGCGCACTTTGCACAGACGTCGTCAATTAAGTCCCAATTTGCCACTTGGTATTGAGTACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR TCA 72 bp GTGATTGGCAAAAACGTTCACAATAACTTATGCCCTTaGGCGAGTCTGCATGTAACACATTCTGTGGTTTCA +
Preference number: 3 (lower is better)
Translates to: VIGKNVHNNLCP*ASLHVTHSVVS
Trigger: TGAAACCACAGAATGTGTTACATGCAGACTCGCTCAAGGGCATAAGTTATTGTGAACGTTTTTGCCAATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR GCA 72 bp CACTATCCGTCCAAGAAAACAATCGCCATAAACCAGTaGAAAATGTGCAACAGAATCAATAAGTGTGTCTTA +
Preference number: 3 (lower is better)
Translates to: HYPSKKTIAINQ*KMCNRINKCVL
Trigger: TAAGACACACTTATTGATTCTGTTGCACATTTTGCACTGGTTTATGGCGATTGTTTTCTTGGACGGATAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp GCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTCCCTGTGTGACTCGGGGTaGGGCCGGGTCTCGTATTGC +
Preference number: 4 (lower is better)
Translates to: AEAPREEGRLPKSQWSGSLCDSG*GRVSYC
Trigger: GCAATACGAGACCCGGCCGCACCCCGAGTCACACAG...GGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp GCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTCCTGCAGTCAGGCACGCTaGTCCCAGCAGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AEAPREEGRLPKSQWSGSCSQAR*SQQPGR
Trigger: CCTTCCTGGCTGCTGGGACCAGCGTGCCTGACTGCA...GGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR CAA 72 bp GCCGGCTTGGCGGAGGCGCCCCGTGAGGAAGGACGTTaGCCCAAGAGCCAGTGGTCAGGGTCCAGTGTACTC +
Preference number: 4 (lower is better)
Translates to: AGLAEAPREEGR*PKSQWSGSSVL
Trigger: GAGTACACTGGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAAGCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp TTGGCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGGGCCGAACTTCCCGCTaGCATGAATGTGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LAEAPREEGRLPKSQWSGGRTSR*HECGPS
Trigger: GCTGGGGCCACATTCATGGCAGCGGGAAGTTCGGCC...CCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp GCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTCCCGATGTGAACAGCTCTaGGGCCGAACTTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: AEAPREEGRLPKSQWSGSRCEQL*GRTSRC
Trigger: GCAGCGGGAAGTTCGGCCCCAGAGCTGTTCACATCG...GGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp TTGGCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGCCCCTACGAGGTCCATaGGGTCAAGCTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LAEAPREEGRLPKSQWSGPLRGP*GQAPSA
Trigger: AGCAGAAGGAGCTTGACCTCATGGACCTCGTAGGGG...CCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp GGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGTCCAAGGCAGGCACCCGGCGGCTCAGTaGTCCCCGCACATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GSSWMGSLFNWGPLVQGRHPAAQ*SPHMGR
Trigger: CCTGCCCATGTGCGGGGACCACTGAGCCGCCGGGTG...CCTGCCTTGGACAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp GCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTCCAGTGGCTGGTTATCATaGTTCGAAGGCCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: AEAPREEGRLPKSQWSGSSGWLS*FEGQPQ
Trigger: CTGAGGCTGGCCTTCGAATCATGATAACCAGCCACT...GGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp GAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTCCAGTAGGTCAAGCTCCTTCTaGTCTCGCAGGCTCGACAGC +
Preference number: 4 (lower is better)
Translates to: EAPREEGRLPKSQWSGSSRSSSF*SRRLDS
Trigger: GCTGTCGAGCCTGCGAGAGCAGAAGGAGCTTGACCT...ACTGGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp GTGGCCTCTGGGTCACTCCCTGTCACCCCAAATGCCAAACAACAAGAGCACATCCCAGGAAGGGAGGGGTaGAGCTGGGCCGGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: VASGSLPVTPNAKQQEHIPGREG*SWAGLA
Trigger: CGCCAAGCCGGCCCAGCTGCACCCCTCCCTTCCTGG...GATGTGCTCTTGTTGTTTGGCATTTGGGGTGACAGGGAGTGACCCAGAGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp TTGGCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGGGTAGTTTGTTTAACTaGGGCCCCCTTGTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LAEAPREEGRLPKSQWSGGSLFN*GPLVQG
Trigger: GCCTTGGACAAGGGGGCCCCAGTTAAACAAACTACC...CCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp TTTCTTCTCCTGTTCCTCAGTTGGGCACGTGCCCCATCCGTTAATGCTGGTTCGGGCGGAGGCGCCCCGTaGGGAAGGACGTTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: FLLLFLSWARAPSVNAGSGGGAP*GRTFAQ
Trigger: TTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCC...CGAACCAGCATTAACGGATGGGGCACGTGCCCAACTGAGGAACAGGAGAAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp GCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTCCCTGCCTGGCAGCTCATaGATGGGTAGTTTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: AEAPREEGRLPKSQWSGSLPGSS*MGSLFN
Trigger: GTTAAACAAACTACCCATCCATGAGCTGCCAGGCAG...GGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp GGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGTCCAAGGCAGGCAGAAAAGAAGGAGCTaGGCCTCTGTGGGCACCCGG +
Preference number: 4 (lower is better)
Translates to: GSSWMGSLFNWGPLVQGRQKRRS*ASVGTR
Trigger: CCGGGTGCCCACAGAGGCTCAGCTCCTTCTTTTCTG...CCTGCCTTGGACAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp TTGGCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGCCTCAGATTCCCCGTTaGTATAAGCCCTGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: LAEAPREEGRLPKSQWSGPQIPR*YKPCCL
Trigger: TAAACAGCAGGGCTTATACCAACGGGGAATCTGAGG...CCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp GAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTCCAGTCAGCCTTTGGGTAATTaGTTAATCCAGAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: EAPREEGRLPKSQWSGSSQPLGN*LIQSPV
Trigger: CACTGGGCTCTGGATTAATCAATTACCCAAAGGCTG...ACTGGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp GAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTCCAGTGAGAGCCCAAATTGGTaGTTTCTTCTCCTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: EAPREEGRLPKSQWSGSSESPNW*FLLLFL
Trigger: GAGGAACAGGAGAAGAAATCACCAATTTGGGCTCTC...ACTGGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp CATTCTGTGGTTTCAAAGGTGTCAGTTCTCTGTTTTCTCCTTCCCTGGCCATCCCCTCCTCCTCGCCGCTaGCCGTCTCCTCGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: HSVVSKVSVLCFLLPWPSPPPRR*PSPRRR
Trigger: GCGACGACGAGGAGACGGGCAGCGGCGAGGAGGAGG...GGATGGCCAGGGAAGGAGAAAACAGAGAACTGACACCTTTGAAACCACAGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp GCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTCCAAAGCACTACATCCATaGATACTCCAACACATCTGG +
Preference number: 4 (lower is better)
Translates to: AEAPREEGRLPKSQWSGSKALHP*ILQHIW
Trigger: CCAGATGTGTTGGAGTATGCATGGATGTAGTGCTTT...GGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp GAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTCCAGTCTGGCAGCTCATGGATaGGTAGTTTGTTTAACTGGG +
Preference number: 4 (lower is better)
Translates to: EAPREEGRLPKSQWSGSSLAAHG*VVCLTG
Trigger: CCCAGTTAAACAAACTACCCATCCATGAGCTGCCAG...ACTGGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp GGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGTCCAAGGCAGGGTTCGGTGCAGTTCTTaGTGTTCCGGAGTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: GSSWMGSLFNWGPLVQGRVRCSS*CSGVRH
Trigger: ATGCCGGACTCCGGAACAGCAAGAACTGCACCGAAC...CCTGCCTTGGACAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp GGCCTCTGGGTCACTCCCTGTCACCCCAAATGCCAAACAACAAGAGCACATCTCCTGAGCCCACGATGGTaGCAACTCCCACATCGCCTT +
Preference number: 4 (lower is better)
Translates to: GLWVTPCHPKCQTTRAHLLSPRW*QLPHRL
Trigger: AAGGCGATGTGGGAGTTGGCACCATCGTGGGCTCAG...GAGATGTGCTCTTGTTGTTTGGCATTTGGGGTGACAGGGAGTGACCCAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp GCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTCCCGTTGGTATAAGCCCTaGTGTTTATCAATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: AEAPREEGRLPKSQWSGSRWYKP*CLSIFV
Trigger: GACAAAGATTGATAAACAGCAGGGCTTATACCAACG...GGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp TGGAGCTGGAAAAGTCACGTGGATGTTGGATGTCTTCACACGGAGGAGGCAGGAGCCAGGAAGCAGAGCTaGCTCAGCAGAAGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: WSWKSHVDVGCLHTEEAGARKQS*LSRRSL
Trigger: GAGGGACCTTCTGCTGAGCCAGCTCTGCTTCCTGGC...TCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp ACATCCATGCATACTCCAACACATCTGGGATGCAAGCCCAGACAACACGGCAGGTGTCTGGGGCACTGCTaGGCCCTGTCCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: TSMHTPTHLGCKPRQHGRCLGHC*ALSHSP
Trigger: TGGAGAATGGGACAGGGCCCAGCAGTGCCCCAGACA...CCTGCCGTGTTGTCTGGGCTTGCATCCCAGATGTGTTGGAGTATGCATGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp GCTGGAAAAGTCACGTGGATGTTGGATGTCTTCACACGGAGGAGGCAGGAAAGGCATGACCCAAGGAGGTaGGGGAGCGAGGATGGGTCA +
Preference number: 4 (lower is better)
Translates to: AGKVTWMLDVFTRRRQERHDPRR*GSEDGS
Trigger: TGACCCATCCTCGCTCCCCCACCTCCTTGGGTCATG...CCTTTCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp TTTCTTCTCCTGTTCCTCAGTTGGGCACGTGCCCCATCCGTTAATGCTGGTTCGGGAGGCAGGAAAGGGTaGGTGGGCATGACCCAAGGA +
Preference number: 4 (lower is better)
Translates to: FLLLFLSWARAPSVNAGSGGRKG*VGMTQG
Trigger: TCCTTGGGTCATGCCCACCCACCCTTTCCTGCCTCC...CGAACCAGCATTAACGGATGGGGCACGTGCCCAACTGAGGAACAGGAGAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp TTGGCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGGTCACTGTTCAAAAATaGAGCTGGAAAAGTCACGTG +
Preference number: 4 (lower is better)
Translates to: LAEAPREEGRLPKSQWSGVTVQK*SWKSHV
Trigger: CACGTGACTTTTCCAGCTCCATTTTTGAACAGTGAC...CCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp TTGGCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGATGGTGTGTCTCAACTaGGTGGAATTAGTCTGCATA +
Preference number: 4 (lower is better)
Translates to: LAEAPREEGRLPKSQWSGMVCLN*VELVCI
Trigger: TATGCAGACTAATTCCACCCAGTTGAGACACACCAT...CCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp TTTCTTCTCCTGTTCCTCAGTTGGGCACGTGCCCCATCCGTTAATGCTGGTTCGCTGGTGTGGGTAGGCTaGCAGCAGCTCGTCTACCAT +
Preference number: 4 (lower is better)
Translates to: FLLLFLSWARAPSVNAGSLVWVG*QQLVYH
Trigger: ATGGTAGACGAGCTGCTGTCAGCCTACCCACACCAG...CGAACCAGCATTAACGGATGGGGCACGTGCCCAACTGAGGAACAGGAGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp GCTGGAAAAGTCACGTGGATGTTGGATGTCTTCACACGGAGGAGGCAGGAAAGGGGACGCCGAACACCGTaGCAAAAACAGAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: AGKVTWMLDVFTRRRQERGRRTP*QKQRPG
Trigger: TCCTGGCCTCTGTTTTTGTCACGGTGTTCGGCGTCC...CCTTTCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp CATTCTGTGGTTTCAAAGGTGTCAGTTCTCTGTTTTCTCCTTCCCTGGCCATCCAAGGGTGGGTGGGCATaGCCCAAGGAGGTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: HSVVSKVSVLCFLLPWPSKGGWA*PKEVGE
Trigger: CTCCCCCACCTCCTTGGGTCATGCCCACCCACCCTT...GGATGGCCAGGGAAGGAGAAAACAGAGAACTGACACCTTTGAAACCACAGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp TGGAGCTGGAAAAGTCACGTGGATGTTGGATGTCTTCACACGGAGGAGGCAGGAGCAGGGCTGGTTCGGTaGAGTTCTTGCTGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: WSWKSHVDVGCLHTEEAGAGLVR*SSCCSG
Trigger: TCCGGAACAGCAAGAACTGCACCGAACCAGCCCTGC...TCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp GGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGTCCAAGGCAGGAGCTTCTTGTCCAGCTaGCACTTGTTCAGGTGGACG +
Preference number: 4 (lower is better)
Translates to: GSSWMGSLFNWGPLVQGRSFLSS*HLFRWT
Trigger: CGTCCACCTGAACAAGTGGCAGCTGGACAAGAAGCT...CCTGCCTTGGACAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp ACTCACAAGTCGGGGAAGCTTCTGTTTTTGACTGCCTGGCAGCTCATGGATGGGCTCCTGTTCCTCAGTTaGGCACGTGCCCCATCCGTT +
Preference number: 4 (lower is better)
Translates to: THKSGKLLFLTAWQLMDGLLFLS*ARAPSV
Trigger: AACGGATGGGGCACGTGCCCAACTGAGGAACAGGAG...CCCATCCATGAGCTGCCAGGCAGTCAAAAACAGAAGCTTCCCCGACTTGTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp GTGGCCTCTGGGTCACTCCCTGTCACCCCAAATGCCAAACAACAAGAGCACATCGCAGCTCGTCTACCATaGTCACTGATGCTTTGCGGT +
Preference number: 4 (lower is better)
Translates to: VASGSLPVTPNAKQQEHIAARLP*SLMLCG
Trigger: ACCGCAAAGCATCAGTGATCATGGTAGACGAGCTGC...GATGTGCTCTTGTTGTTTGGCATTTGGGGTGACAGGGAGTGACCCAGAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp TTTCTTCTCCTGTTCCTCAGTTGGGCACGTGCCCCATCCGTTAATGCTGGTTCGGAAAGAGCCACAACCTaGCCAGCAAAGAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: FLLLFLSWARAPSVNAGSERATT*PAKSPQ
Trigger: CTGTGGGCTCTTTGCTGGGCAGGTTGTGGCTCTTTC...CGAACCAGCATTAACGGATGGGGCACGTGCCCAACTGAGGAACAGGAGAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp TTTGACTGCCTGGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGCCAACACATCTGGGATaGAAGCCCAGACAACACGGC +
Preference number: 4 (lower is better)
Translates to: FDCLAAHGWVVCLTGAPLPTHLG*KPRQHG
Trigger: GCCGTGTTGTCTGGGCTTGCATCCCAGATGTGTTGG...CAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCCAGGCAGTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp ACATCCATGCATACTCCAACACATCTGGGATGCAAGCCCAGACAACACGGCAGGGTGAGGAAGGACGTTTaGCCAAGAGCCAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: TSMHTPTHLGCKPRQHGRVRKDV*PRASGQ
Trigger: CTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCAC...CCTGCCGTGTTGTCTGGGCTTGCATCCCAGATGTGTTGGAGTATGCATGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp TTTCTTCTCCTGTTCCTCAGTTGGGCACGTGCCCCATCCGTTAATGCTGGTTCGATGGCACAGAGCACATaGAGGACCACCGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: FLLLFLSWARAPSVNAGSMAQST*RTTAPC
Trigger: ACAAGGTGCGGTGGTCCTCCATGTGCTCTGTGCCAT...CGAACCAGCATTAACGGATGGGGCACGTGCCCAACTGAGGAACAGGAGAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp CATTCTGTGGTTTCAAAGGTGTCAGTTCTCTGTTTTCTCCTTCCCTGGCCATCCCCGCTGAGCCCACGATaGTGCCAACTCCCACATCGC +
Preference number: 4 (lower is better)
Translates to: HSVVSKVSVLCFLLPWPSPLSPR*CQLPHR
Trigger: GCGATGTGGGAGTTGGCACCATCGTGGGCTCAGCGG...GGATGGCCAGGGAAGGAGAAAACAGAGAACTGACACCTTTGAAACCACAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp CATTCTGTGGTTTCAAAGGTGTCAGTTCTCTGTTTTCTCCTTCCCTGGCCATCCACATGCGACTGGCCATaGAGAGCCGGGTCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: HSVVSKVSVLCFLLPWPSTCDWP*RAGSWG
Trigger: CCCCCAAGACCCGGCTCTCCATGGCCAGTCGCATGT...GGATGGCCAGGGAAGGAGAAAACAGAGAACTGACACCTTTGAAACCACAGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp ACATCCATGCATACTCCAACACATCTGGGATGCAAGCCCAGACAACACGGCAGGCGAGGGGGTGTCGAATaGTGTGTACGGTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: TSMHTPTHLGCKPRQHGRRGGVE*CVRSFI
Trigger: GATGAAGGACCGTACACACCATTCGACACCCCCTCG...CCTGCCGTGTTGTCTGGGCTTGCATCCCAGATGTGTTGGAGTATGCATGGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp GCTGGAAAAGTCACGTGGATGTTGGATGTCTTCACACGGAGGAGGCAGGAAAGGCTGCGATCCACAGCGTaGAGGAAGCAAACGTCACCA +
Preference number: 4 (lower is better)
Translates to: AGKVTWMLDVFTRRRQERLRSTA*RKQTSP
Trigger: TGGTGACGTTTGCTTCCTCCACGCTGTGGATCGCAG...CCTTTCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp GCTGGAAAAGTCACGTGGATGTTGGATGTCTTCACACGGAGGAGGCAGGAAAGGTGCCACTTGTTCAGGTaGACGCCGAACACCGTGACA +
Preference number: 4 (lower is better)
Translates to: AGKVTWMLDVFTRRRQERCHLFR*TPNTVT
Trigger: TGTCACGGTGTTCGGCGTCCACCTGAACAAGTGGCA...CCTTTCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp TGGAGCTGGAAAAGTCACGTGGATGTTGGATGTCTTCACACGGAGGAGGCAGGAGGAATCAGTGTTGCCTaGCTCAGGCCAGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: WSWKSHVDVGCLHTEEAGGISVA*LRPVSS
Trigger: GCTGCTAACTGGCCTGAGCCAGGCAACACTGATTCC...TCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp TTTCTTCTCCTGTTCCTCAGTTGGGCACGTGCCCCATCCGTTAATGCTGGTTCGAACTCAGCGGCCAGGTaGACGCCCATTTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: FLLLFLSWARAPSVNAGSNSAAR*TPISLF
Trigger: AAACAGTGAAATGGGCGTTCACCTGGCCGCTGAGTT...CGAACCAGCATTAACGGATGGGGCACGTGCCCAACTGAGGAACAGGAGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp TTTCTTCTCCTGTTCCTCAGTTGGGCACGTGCCCCATCCGTTAATGCTGGTTCGTCATTGGGGAATTCATaGAGGGCTGGTTCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FLLLFLSWARAPSVNAGSSLGNS*RAGSVQ
Trigger: CTGCACCGAACCAGCCCTGCATGAATTCCCCAATGA...CGAACCAGCATTAACGGATGGGGCACGTGCCCAACTGAGGAACAGGAGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp TGGAGCTGGAAAAGTCACGTGGATGTTGGATGTCTTCACACGGAGGAGGCAGGAAGTAGATCAGCCCCCTaGTATTCAGCCGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: WSWKSHVDVGCLHTEEAGSRSAP*YSAGCR
Trigger: CCTACATCCGGCTGAATAGCAGGGGGCTGATCTACT...TCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp GGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGTCCAAGGCAGGCCCTGTCACCCCAAATaGCAAACAACAAGAGCACAT +
Preference number: 4 (lower is better)
Translates to: GSSWMGSLFNWGPLVQGRPCHPK*QTTRAH
Trigger: ATGTGCTCTTGTTGTTTGGCATTTGGGGTGACAGGG...CCTGCCTTGGACAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp AATTCATACCAGAATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATAGGGAGGGGTGCAGCTaGGCCGGCTTGGCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: NSYQNVYKGQGKPYRMNDREGCS*AGLAEA
Trigger: CGCCTCCGCCAAGCCGGCCCAGCTGCACCCCTCCCT...ATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATTCTGGTATGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp TTTGACTGCCTGGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGTCTGTAACTCCTGCATaGAAAGCAGTGGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FDCLAAHGWVVCLTGAPLSVTPA*KAVVAS
Trigger: AGAGGCCACCACTGCTTTTCATGCAGGAGTTACAGA...CAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCCAGGCAGTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp GCTGGAAAAGTCACGTGGATGTTGGATGTCTTCACACGGAGGAGGCAGGAAAGGTGTTCTTGGTGGCCTTaGCCAGTGGCTCCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: AGKVTWMLDVFTRRRQERCSWWP*PVAPLK
Trigger: TTTTAGAGGAGCCACTGGGCAAGGCCACCAAGAACA...CCTTTCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp TGGAGCTGGAAAAGTCACGTGGATGTTGGATGTCTTCACACGGAGGAGGCAGGAGCTTCTGTTTTTGACTaGCTGGCAGCTCATGGATGG +
Preference number: 4 (lower is better)
Translates to: WSWKSHVDVGCLHTEEAGASVFD*LAAHGW
Trigger: CCATCCATGAGCTGCCAGGCAGTCAAAAACAGAAGC...TCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp ACATCCATGCATACTCCAACACATCTGGGATGCAAGCCCAGACAACACGGCAGGGAATTCATGCAGGGCTaGTTCGGTGCAGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: TSMHTPTHLGCKPRQHGREFMQG*FGAVLA
Trigger: AGCAAGAACTGCACCGAACCAGCCCTGCATGAATTC...CCTGCCGTGTTGTCTGGGCTTGCATCCCAGATGTGTTGGAGTATGCATGGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp CAAAGTGCGCTTCTCTCCATTTTCCAAGAAACCAGTGTCTGTAACTCCTGCATGCAGCCACATCTTCACTaGGGTGCAGGCGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: QSALLSIFQETSVCNSCMQPHLH*GAGAHR
Trigger: TCTGTGAGCGCCTGCACCTCAGTGAAGATGTGGCTG...CATGCAGGAGTTACAGACACTGGTTTCTTGGAAAATGGAGAGAAGCGCACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp GGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGTCCAAGGCAGGTGCAGTTGGGTACAGTaGAGTATAAGACGAAACTCA +
Preference number: 4 (lower is better)
Translates to: GSSWMGSLFNWGPLVQGRCSWVQ*SIRRNS
Trigger: TGAGTTTCGTCTTATACTTCACTGTACCCAACTGCA...CCTGCCTTGGACAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp GGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGTCCAAGGCAGGAAATTGGGACTTAATTaGCGACGTCTGTGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: GSSWMGSLFNWGPLVQGRKLGLN*RRLCKV
Trigger: CACTTTGCACAGACGTCGTCAATTAAGTCCCAATTT...CCTGCCTTGGACAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp TTTGACTGCCTGGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGAGGGCTGTTGAGCAGTaGTTGGCAAAAACGTTCACA +
Preference number: 4 (lower is better)
Translates to: FDCLAAHGWVVCLTGAPLRAVEQ*LAKTFT
Trigger: TGTGAACGTTTTTGCCAATCACTGCTCAACAGCCCT...CAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCCAGGCAGTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp GCTGGAAAAGTCACGTGGATGTTGGATGTCTTCACACGGAGGAGGCAGGAAAGGACATCTTCACTGAGGTaGAGGCGCTCACAGATCTTT +
Preference number: 4 (lower is better)
Translates to: AGKVTWMLDVFTRRRQERTSSLR*RRSQIF
Trigger: AAAGATCTGTGAGCGCCTGCACCTCAGTGAAGATGT...CCTTTCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp GGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGTCCAAGGCAGGCCATTCTCCACGGTGTaGTTAATTGGGATTTTGATG +
Preference number: 4 (lower is better)
Translates to: GSSWMGSLFNWGPLVQGRPFSTV*LIGILM
Trigger: CATCAAAATCCCAATTAAGCACACCGTGGAGAATGG...CCTGCCTTGGACAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp TGGAGCTGGAAAAGTCACGTGGATGTTGGATGTCTTCACACGGAGGAGGCAGGAAGACAACACGGCAGGTaGAGCCTTTGGGTAATTGAT +
Preference number: 4 (lower is better)
Translates to: WSWKSHVDVGCLHTEEAGRQHGR*SLWVID
Trigger: ATCAATTACCCAAAGGCTGCACCTGCCGTGTTGTCT...TCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp ACTCACAAGTCGGGGAAGCTTCTGTTTTTGACTGCCTGGCAGCTCATGGATGGGCACGGTGTGCTTAATTaGGATTTTGATGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: THKSGKLLFLTAWQLMDGHGVLN*DFDGHL
Trigger: GAGGTGGCCATCAAAATCCCAATTAAGCACACCGTG...CCCATCCATGAGCTGCCAGGCAGTCAAAAACAGAAGCTTCCCCGACTTGTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp ACATCCATGCATACTCCAACACATCTGGGATGCAAGCCCAGACAACACGGCAGGAAGTCACGTGGATGTTaGATGTCTTCACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: TSMHTPTHLGCKPRQHGRKSRGC*MSSHGG
Trigger: TCCTCCGTGTGAAGACATCCAACATCCACGTGACTT...CCTGCCGTGTTGTCTGGGCTTGCATCCCAGATGTGTTGGAGTATGCATGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp GCTGGAAAAGTCACGTGGATGTTGGATGTCTTCACACGGAGGAGGCAGGAAAGGAAAAGGAGGAGGGATTaGAATCAGTGTTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: AGKVTWMLDVFTRRRQERKRRRD*NQCCLA
Trigger: AGCCAGGCAACACTGATTCCAATCCCTCCTCCTTTT...CCTTTCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp TTTGACTGCCTGGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGATACTCCAACACATCTaGGATGCAAGCCCAGACAAC +
Preference number: 4 (lower is better)
Translates to: FDCLAAHGWVVCLTGAPLILQHI*DASPDN
Trigger: GTTGTCTGGGCTTGCATCCCAGATGTGTTGGAGTAT...CAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCCAGGCAGTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp CATTCTGTGGTTTCAAAGGTGTCAGTTCTCTGTTTTCTCCTTCCCTGGCCATCCTTGCCCAAGAGCCAGTaGTCAGGGTCCAGTGTACTC +
Preference number: 4 (lower is better)
Translates to: HSVVSKVSVLCFLLPWPSLPKSQ*SGSSVL
Trigger: GAGTACACTGGACCCTGACCACTGGCTCTTGGGCAA...GGATGGCCAGGGAAGGAGAAAACAGAGAACTGACACCTTTGAAACCACAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp ACTCACAAGTCGGGGAAGCTTCTGTTTTTGACTGCCTGGCAGCTCATGGATGGGACAAGTGAACAAGCATaGTGTGTCTCAACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: THKSGKLLFLTAWQLMDGTSEQA*CVSTGW
Trigger: CCACCCAGTTGAGACACACCATGCTTGTTCACTTGT...CCCATCCATGAGCTGCCAGGCAGTCAAAAACAGAAGCTTCCCCGACTTGTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp ACTCACAAGTCGGGGAAGCTTCTGTTTTTGACTGCCTGGCAGCTCATGGATGGGGTCTACCATGATCACTaGTGCTTTGCGGTGGAAATT +
Preference number: 4 (lower is better)
Translates to: THKSGKLLFLTAWQLMDGVYHDH*CFAVEI
Trigger: AATTTCCACCGCAAAGCATCAGTGATCATGGTAGAC...CCCATCCATGAGCTGCCAGGCAGTCAAAAACAGAAGCTTCCCCGACTTGTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp GCTGGAAAAGTCACGTGGATGTTGGATGTCTTCACACGGAGGAGGCAGGAAAGGATCTTTGTCTCTCATTaGTCAACATGCGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: AGKVTWMLDVFTRRRQERIFVSH*STCDWP
Trigger: TGGCCAGTCGCATGTTGATCAATGAGAGACAAAGAT...CCTTTCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp CATTCTGTGGTTTCAAAGGTGTCAGTTCTCTGTTTTCTCCTTCCCTGGCCATCCGGCCGGGTCTCGTATTaGACAGAAAAGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: HSVVSKVSVLCFLLPWPSGRVSY*TEKKEL
Trigger: CAGCTCCTTCTTTTCTGTGCAATACGAGACCCGGCC...GGATGGCCAGGGAAGGAGAAAACAGAGAACTGACACCTTTGAAACCACAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp ACTCACAAGTCGGGGAAGCTTCTGTTTTTGACTGCCTGGCAGCTCATGGATGGGGCTGGAAAAGTCACGTaGATGTTGGATGTCTTCACA +
Preference number: 4 (lower is better)
Translates to: THKSGKLLFLTAWQLMDGAGKVT*MLDVFT
Trigger: TGTGAAGACATCCAACATCCACGTGACTTTTCCAGC...CCCATCCATGAGCTGCCAGGCAGTCAAAAACAGAAGCTTCCCCGACTTGTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp CAAAGTGCGCTTCTCTCCATTTTCCAAGAAACCAGTGTCTGTAACTCCTGCATGCATGAAAAGCAGTGGTaGCCTCTGGGTCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: QSALLSIFQETSVCNSCMHEKQW*PLGHSL
Trigger: CAGGGAGTGACCCAGAGGCCACCACTGCTTTTCATG...CATGCAGGAGTTACAGACACTGGTTTCTTGGAAAATGGAGAGAAGCGCACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
3UTR CAA 72 bp CTGTTCAAAAATGGAGCTGGAAAAGTCACGTGGATGTaGGATGTCTTCACACGGAGGAGGCAGGAAAGGGTG +
Preference number: 4 (lower is better)
Translates to: LFKNGAGKVTWM*DVFTRRRQERV
Trigger: CACCCTTTCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGCTCCATTTTTGAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp CAAAGTGCGCTTCTCTCCATTTTCCAAGAAACCAGTGTCTGTAACTCCTGCATGAAGCAAACGTCACCATaGACCATTTCTCCCAGCGCG +
Preference number: 4 (lower is better)
Translates to: QSALLSIFQETSVCNSCMKQTSP*TISPSA
Trigger: CGCGCTGGGAGAAATGGTTCATGGTGACGTTTGCTT...CATGCAGGAGTTACAGACACTGGTTTCTTGGAAAATGGAGAGAAGCGCACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp AATTCATACCAGAATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATCCCTGTCTGGGGCACTaGTGGGCCCTGTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: NSYQNVYKGQGKPYRMNDPCLGH*WALSHS
Trigger: AGAATGGGACAGGGCCCAGCAGTGCCCCAGACAGGG...ATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATTCTGGTATGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp AATTCATACCAGAATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATATTCACGCCCCTGTCTaGGGCACTGCTGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: NSYQNVYKGQGKPYRMNDIHAPV*GTAGPC
Trigger: ACAGGGCCCAGCAGTGCCCCAGACAGGGGCGTGAAT...ATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATTCTGGTATGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp AGTAAATACAAGGGACAGCACGGGCAAGAATCCACAGTTTCAATAAATACAAGTGGTCAGGGGAGAGCCTaGGCCACCAAAACAGGAGCG +
Preference number: 4 (lower is better)
Translates to: SKYKGQHGQESTVSINTSGQGRA*ATKTGA
Trigger: CGCTCCTGTTTTGGTGGCCCAGGCTCTCCCCTGACC...ACTTGTATTTATTGAAACTGTGGATTCTTGCCCGTGCTGTCCCTTGTATTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp GTGGCCTCTGGGTCACTCCCTGTCACCCCAAATGCCAAACAACAAGAGCACATCGTTCAAAAATGGAGCTaGAAAAGTCACGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: VASGSLPVTPNAKQQEHIVQKWS*KSHVDV
Trigger: AACATCCACGTGACTTTTCCAGCTCCATTTTTGAAC...GATGTGCTCTTGTTGTTTGGCATTTGGGGTGACAGGGAGTGACCCAGAGGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp GGCCTCTGGGTCACTCCCTGTCACCCCAAATGCCAAACAACAAGAGCACATCTCGAAGCTCTTGATCTCTaGAAGAAAAGGAGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: GLWVTPCHPKCQTTRAHLEALDL*KKRSKR
Trigger: CCTTTTACTCCTTTTCTTCCAGAGATCAAGAGCTTC...GAGATGTGCTCTTGTTGTTTGGCATTTGGGGTGACAGGGAGTGACCCAGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp AATTCATACCAGAATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATAGCAGTGGTGGCCTCTaGGTCACTCCCTGTCACCCC +
Preference number: 4 (lower is better)
Translates to: NSYQNVYKGQGKPYRMNDSSGGL*VTPCHP
Trigger: GGGGTGACAGGGAGTGACCCAGAGGCCACCACTGCT...ATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATTCTGGTATGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp TTTCTTCTCCTGTTCCTCAGTTGGGCACGTGCCCCATCCGTTAATGCTGGTTCGTACCAAGTGGCAAATTaGGACTTAATTGACGACGTC +
Preference number: 4 (lower is better)
Translates to: FLLLFLSWARAPSVNAGSYQVAN*DLIDDV
Trigger: GACGTCGTCAATTAAGTCCCAATTTGCCACTTGGTA...CGAACCAGCATTAACGGATGGGGCACGTGCCCAACTGAGGAACAGGAGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp CAAAGTGCGCTTCTCTCCATTTTCCAAGAAACCAGTGTCTGTAACTCCTGCATGAGTGTCTGTAACTCCTaGATGAAAAGCAGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: QSALLSIFQETSVCNSCMSVCNS*MKSSGG
Trigger: GCCACCACTGCTTTTCATGCAGGAGTTACAGACACT...CATGCAGGAGTTACAGACACTGGTTTCTTGGAAAATGGAGAGAAGCGCACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp GCTGGAAAAGTCACGTGGATGTTGGATGTCTTCACACGGAGGAGGCAGGAAAGGACTGATGCTTTGCGGTaGAAATTTGCTTTCTTAAGT +
Preference number: 4 (lower is better)
Translates to: AGKVTWMLDVFTRRRQERTDALR*KFAFLS
Trigger: ACTTAAGAAAGCAAATTTCCACCGCAAAGCATCAGT...CCTTTCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp AGTAAATACAAGGGACAGCACGGGCAAGAATCCACAGTTTCAATAAATACAAGTTGTTGGCCAATCCGTTaGCCATGTTCCCGGCACCTT +
Preference number: 4 (lower is better)
Translates to: SKYKGQHGQESTVSINTSCWPIR*PCSRHL
Trigger: AAGGTGCCGGGAACATGGTCAACGGATTGGCCAACA...ACTTGTATTTATTGAAACTGTGGATTCTTGCCCGTGCTGTCCCTTGTATTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp CAAAGTGCGCTTCTCTCCATTTTCCAAGAAACCAGTGTCTGTAACTCCTGCATGTTGCGTCGCAGTTGCTaGTGTCATCAATTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: QSALLSIFQETSVCNSCMLRRSC*CHQFQH
Trigger: ATGCTGAAATTGATGACAGCAGCAACTGCGACGCAA...CATGCAGGAGTTACAGACACTGGTTTCTTGGAAAATGGAGAGAAGCGCACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp TTTGACTGCCTGGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGTGGGTGGAATTAGTCTaGATAATAATTCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: FDCLAAHGWVVCLTGAPLWVELV*IIIQHH
Trigger: ATGATGCTGAATTATTATGCAGACTAATTCCACCCA...CAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCCAGGCAGTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp ACATCCATGCATACTCCAACACATCTGGGATGCAAGCCCAGACAACACGGCAGGAACCAGTGCAAAATGTaGAACAGAATCAATAAGTGT +
Preference number: 4 (lower is better)
Translates to: TSMHTPTHLGCKPRQHGRNQCKM*NRINKC
Trigger: ACACTTATTGATTCTGTTGCACATTTTGCACTGGTT...CCTGCCGTGTTGTCTGGGCTTGCATCCCAGATGTGTTGGAGTATGCATGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CCA 90 bp CATTCTGTGGTTTCAAAGGTGTCAGTTCTCTGTTTTCTCCTTCCCTGGCCATCCCATAGAACATGTATATaGCACAGAGCACATGGAGGA +
Preference number: 4 (lower is better)
Translates to: HSVVSKVSVLCFLLPWPSHRTCI*HRAHGG
Trigger: TCCTCCATGTGCTCTGTGCCATATACATGTTCTATG...GGATGGCCAGGGAAGGAGAAAACAGAGAACTGACACCTTTGAAACCACAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp CAAAGTGCGCTTCTCTCCATTTTCCAAGAAACCAGTGTCTGTAACTCCTGCATGTTCTATCCTCGTTTGTaGAGATGTCATTGGGGAATT +
Preference number: 4 (lower is better)
Translates to: QSALLSIFQETSVCNSCMFYPRL*RCHWGI
Trigger: AATTCCCCAATGACATCTTCACAAACGAGGATAGAA...CATGCAGGAGTTACAGACACTGGTTTCTTGGAAAATGGAGAGAAGCGCACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp CAAAGTGCGCTTCTCTCCATTTTCCAAGAAACCAGTGTCTGTAACTCCTGCATGGAAAACCATACCGAATaGATGATAAGTGATCAGTGC +
Preference number: 4 (lower is better)
Translates to: QSALLSIFQETSVCNSCMENHTE*MISDQC
Trigger: GCACTGATCACTTATCATTCATTCGGTATGGTTTTC...CATGCAGGAGTTACAGACACTGGTTTCTTGGAAAATGGAGAGAAGCGCACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp AATTCATACCAGAATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATCAGTTGCGTCGCAGTTaGTGCTGTCATCAATTTCAG +
Preference number: 4 (lower is better)
Translates to: NSYQNVYKGQGKPYRMNDQLRRS*CCHQFQ
Trigger: CTGAAATTGATGACAGCAGCAACTGCGACGCAACTG...ATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATTCTGGTATGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp AATTCATACCAGAATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATCATTCTCTGTTTCGTTaGCAGCCTCAGCCACAACAT +
Preference number: 4 (lower is better)
Translates to: NSYQNVYKGQGKPYRMNDHSLFR*QPQPQH
Trigger: ATGTTGTGGCTGAGGCTGGCAACGAAACAGAGAATG...ATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATTCTGGTATGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp AATTCATACCAGAATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATCTCCTCTCAAAGCACTaGTGTATGCAAGCGTTATAT +
Preference number: 4 (lower is better)
Translates to: NSYQNVYKGQGKPYRMNDLLSKH*CMQALY
Trigger: ATATAACGCTTGCATACATCAGTGCTTTGAGAGGAG...ATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATTCTGGTATGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR TCA 90 bp AGTAAATACAAGGGACAGCACGGGCAAGAATCCACAGTTTCAATAAATACAAGTAATAACTTATGCCCTTaGGCGAGTCTGCATGTAACA +
Preference number: 4 (lower is better)
Translates to: SKYKGQHGQESTVSINTSNNLCP*ASLHVT
Trigger: TGTTACATGCAGACTCGCTCAAGGGCATAAGTTATT...ACTTGTATTTATTGAAACTGTGGATTCTTGCCCGTGCTGTCCCTTGTATTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp AATTCATACCAGAATGTGTACAAGGGACAGGGAAAACCATACCGAATGAATGATGGCTATAAAATGTCATaGATTTGTTCTTGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: NSYQNVYKGQGKPYRMNDGYKMS*ICSWWP
Trigger: AGGCCACCAAGAACAAATGCATGACATTTTATAGCC...ATCATTCATTCGGTATGGTTTTCCCTGTCCCTTGTACACATTCTGGTATGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR GCA 90 bp AGTAAATACAAGGGACAGCACGGGCAAGAATCCACAGTTTCAATAAATACAAGTATCGCCATAAACCAGTaGAAAATGTGCAACAGAATC +
Preference number: 4 (lower is better)
Translates to: SKYKGQHGQESTVSINTSIAINQ*KMCNRI
Trigger: GATTCTGTTGCACATTTTGCACTGGTTTATGGCGAT...ACTTGTATTTATTGAAACTGTGGATTCTTGCCCGTGCTGTCCCTTGTATTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CCA 90 bp GACAGCGACCAGAGCAGCAGCGCCACCGAGGCCAGGAAGCAGAGCTaGCTCAGCAGAAGGTCCCTCCGGCGGCGGCGGCGGCGGCGGCGA +
Preference number: 5 (lower is better)
Translates to: DSDQSSSATEARKQS*LSRRSLRRRRRRRR
Trigger: TCGCCGCCGCCGCCGCCGCCGCCGGAGGGACCTTCTGCTGAGCCAGCTCTGCTTCCTGGCCTCGGTGGCGCTGCTGCTCTGGTCGCTGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp GGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGTCCAAGGCAGGTGCAGCTGGGCCGGCTaGGCGGAGGCGCCCCGTGAG +
Preference number: 5 (lower is better)
Translates to: GSSWMGSLFNWGPLVQGRCSWAG*AEAPRE
Trigger: CTCACGGGGCGCCTCCGCCAAGCCGGCCCAGCTGCA...CCTGCCTTGGACAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CCA 90 bp CGGCCGGGTCTCGTATTGCACAGAAAAGAAGGAGCTGAGCCTCTGTaGGCACCCGGCGGCTCAGTGGTCCCCGCACATGGGCAGGTTCAC +
Preference number: 5 (lower is better)
Translates to: RPGLVLHRKEGAEPL*APGGSVVPAHGQVH
Trigger: GTGAACCTGCCCATGTGCGGGGACCACTGAGCCGCCGGGTGCCCACAGAGGCTCAGCTCCTTCTTTTCTGTGCAATACGAGACCCGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp TTGGCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTCCCAGCGCGGCTTGTaGCAGTTGGGTACAGTGAAG +
Preference number: 5 (lower is better)
Translates to: LAEAPREEGRLPKSQWSGSQRGL*QLGTVK
Trigger: CTTCACTGTACCCAACTGCAACAAGCCGCGCTGGGA...CCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp TTGGCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTTGTTGGCCAATCCGTaGACCATGTTCCCGGCACCT +
Preference number: 5 (lower is better)
Translates to: LAEAPREEGRLPKSQWSGLLANP*TMFPAP
Trigger: AGGTGCCGGGAACATGGTCAACGGATTGGCCAACAA...CCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CCA 90 bp ACAGAAAAGAAGGAGCTGAGCCTCTGTGGGCACCCGGCGGCTCAGTaGTCCCCGCACATGGGCAGGTTCACAAAGGTGAACACGTTGAAC +
Preference number: 5 (lower is better)
Translates to: TEKKELSLCGHPAAQ*SPHMGRFTKVNTLN
Trigger: GTTCAACGTGTTCACCTTTGTGAACCTGCCCATGTGCGGGGACCACTGAGCCGCCGGGTGCCCACAGAGGCTCAGCTCCTTCTTTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp GAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTCCAGTTCATGGATGGGTAGTTaGTTTAACTGGGGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: EAPREEGRLPKSQWSGSSSWMGS*FNWGPL
Trigger: AAGGGGGCCCCAGTTAAACAAACTACCCATCCATGA...ACTGGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp GCGGAGGCGCCCCGTGAGGAAGGACGTTTGCCCAAGAGCCAGTGGTCAGGGTCCAATCTAGCAGGGCTGTaGAGCAGTGATTGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: AEAPREEGRLPKSQWSGSNLAGL*SSDWQK
Trigger: TTTTTGCCAATCACTGCTCAACAGCCCTGCTAGATT...GGACCCTGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACGGGGCGCCTCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp GTGGCCTCTGGGTCACTCCCTGTCACCCCAAATGCCAAACAACAAGAGCACATCGGTTCGGTGCAGTTCTaGCTGTTCCGGAGTCCGGCA +
Preference number: 5 (lower is better)
Translates to: VASGSLPVTPNAKQQEHIGSVQF*LFRSPA
Trigger: TGCCGGACTCCGGAACAGCAAGAACTGCACCGAACC...GATGTGCTCTTGTTGTTTGGCATTTGGGGTGACAGGGAGTGACCCAGAGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp GTGGCCTCTGGGTCACTCCCTGTCACCCCAAATGCCAAACAACAAGAGCACATCTCTCCTGTTCCTCAGTaGGGCACGTGCCCCATCCGT +
Preference number: 5 (lower is better)
Translates to: VASGSLPVTPNAKQQEHISPVPQ*GTCPIR
Trigger: ACGGATGGGGCACGTGCCCAACTGAGGAACAGGAGA...GATGTGCTCTTGTTGTTTGGCATTTGGGGTGACAGGGAGTGACCCAGAGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS GCA 90 bp ACACCATACAGGAGGAGGCACCCACAGCCCAGCTTCTTGTCCAGCTaGCACTTGTTCAGGTGGACGCCGAACACCGTGACAAAAACAGAG +
Preference number: 5 (lower is better)
Translates to: TPYRRRHPQPSFLSS*HLFRWTPNTVTKTE
Trigger: CTCTGTTTTTGTCACGGTGTTCGGCGTCCACCTGAACAAGTGGCAGCTGGACAAGAAGCTGGGCTGTGGGTGCCTCCTCCTGTATGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS GCA 90 bp CTGTTCCGGAGTCCGGCATCTTCGGAAGTCAGAGTGTCGTTCACCTaGATCAGCTTCCTCGCCATCATCCACTTTCTGTCTTCCCCTACG +
Preference number: 5 (lower is better)
Translates to: LFRSPASSEVRVSFT*ISFLAIIHFLSSPT
Trigger: CGTAGGGGAAGACAGAAAGTGGATGATGGCGAGGAAGCTGATGCAGGTGAACGACACTCTGACTTCCGAAGATGCCGGACTCCGGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp ACTCACAAGTCGGGGAAGCTTCTGTTTTTGACTGCCTGGCAGCTCATGGATGGGCATGTCCCCCATCCCTaGTCTGGCCACAATGAGGCT +
Preference number: 5 (lower is better)
Translates to: THKSGKLLFLTAWQLMDGHVPHP*SGHNEA
Trigger: AGCCTCATTGTGGCCAGACAAGGGATGGGGGACATG...CCCATCCATGAGCTGCCAGGCAGTCAAAAACAGAAGCTTCCCCGACTTGTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp TGGAGCTGGAAAAGTCACGTGGATGTTGGATGTCTTCACACGGAGGAGGCAGGATTGTCCAGCTGCCACTaGTTCAGGTGGACGCCGAAC +
Preference number: 5 (lower is better)
Translates to: WSWKSHVDVGCLHTEEAGLSSCH*FRWTPN
Trigger: GTTCGGCGTCCACCTGAACAAGTGGCAGCTGGACAA...TCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp ACATCCATGCATACTCCAACACATCTGGGATGCAAGCCCAGACAACACGGCAGGCGGCCGGGTCTCGTATaGCACAGAAAAGAAGGAGCT +
Preference number: 5 (lower is better)
Translates to: TSMHTPTHLGCKPRQHGRRPGLV*HRKEGA
Trigger: AGCTCCTTCTTTTCTGTGCAATACGAGACCCGGCCG...CCTGCCGTGTTGTCTGGGCTTGCATCCCAGATGTGTTGGAGTATGCATGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp TTTCTTCTCCTGTTCCTCAGTTGGGCACGTGCCCCATCCGTTAATGCTGGTTCGGTCATGCATTTGTTCTaGGTGGCCTTGCCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: FLLLFLSWARAPSVNAGSVMHLF*VALPSG
Trigger: GCCACTGGGCAAGGCCACCAAGAACAAATGCATGAC...CGAACCAGCATTAACGGATGGGGCACGTGCCCAACTGAGGAACAGGAGAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp TTTGACTGCCTGGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGGAGGACCACCGCACCTaGTCTTCTATCCTCGTTTGT +
Preference number: 5 (lower is better)
Translates to: FDCLAAHGWVVCLTGAPLEDHRT*SSILVC
Trigger: ACAAACGAGGATAGAAGACAAGGTGCGGTGGTCCTC...CAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCCAGGCAGTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp GGCCTCTGGGTCACTCCCTGTCACCCCAAATGCCAAACAACAAGAGCACATCTCCGCGGCTTGTTGCAGTaGGGTACAGTGAAGTATAAG +
Preference number: 5 (lower is better)
Translates to: GLWVTPCHPKCQTTRAHLRGLLQ*GTVKYK
Trigger: CTTATACTTCACTGTACCCAACTGCAACAAGCCGCG...GAGATGTGCTCTTGTTGTTTGGCATTTGGGGTGACAGGGAGTGACCCAGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp TTTGACTGCCTGGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGTTGTTCTTGGTGGCCTaGCCCAGTGGCTCCTCTAAA +
Preference number: 5 (lower is better)
Translates to: FDCLAAHGWVVCLTGAPLLFLVA*PSGSSK
Trigger: TTTAGAGGAGCCACTGGGCAAGGCCACCAAGAACAA...CAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCCAGGCAGTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS TCA 90 bp AGAGCACATGGAGGACCACCGCACCTTGTCTTCTATCCTCGTTTGTaGAGATGTCATTGGGGAATTCATGCAGGGCTGGTTCGGTGCAGT +
Preference number: 5 (lower is better)
Translates to: RAHGGPPHLVFYPRL*RCHWGIHAGLVRCS
Trigger: ACTGCACCGAACCAGCCCTGCATGAATTCCCCAATGACATCTTCACAAACGAGGATAGAAGACAAGGTGCGGTGGTCCTCCATGTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp GGCAGCTCATGGATGGGTAGTTTGTTTAACTGGGGCCCCCTTGTCCAAGGCAGGACAAAGGTGAACACGTaGAACTCAGTCATGATGGAG +
Preference number: 5 (lower is better)
Translates to: GSSWMGSLFNWGPLVQGRTKVNT*NSVMME
Trigger: CTCCATCATGACTGAGTTCAACGTGTTCACCTTTGT...CCTGCCTTGGACAAGGGGGCCCCAGTTAAACAAACTACCCATCCATGAGCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp ACTCACAAGTCGGGGAAGCTTCTGTTTTTGACTGCCTGGCAGCTCATGGATGGGAAAAAGGAGGAGGGATaGGAATCAGTGTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: THKSGKLLFLTAWQLMDGKKEEG*ESVLPG
Trigger: GCCAGGCAACACTGATTCCAATCCCTCCTCCTTTTT...CCCATCCATGAGCTGCCAGGCAGTCAAAAACAGAAGCTTCCCCGACTTGTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp GTGGCCTCTGGGTCACTCCCTGTCACCCCAAATGCCAAACAACAAGAGCACATCTTTGTGAAGATGTCATaGGGGAATTCATGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: VASGSLPVTPNAKQQEHIFVKMS*GNSCRA
Trigger: AGCCCTGCATGAATTCCCCAATGACATCTTCACAAA...GATGTGCTCTTGTTGTTTGGCATTTGGGGTGACAGGGAGTGACCCAGAGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp TGGAGCTGGAAAAGTCACGTGGATGTTGGATGTCTTCACACGGAGGAGGCAGGAACAGTTGCGTCGCAGTaGCTGCTGTCATCAATTTCA +
Preference number: 5 (lower is better)
Translates to: WSWKSHVDVGCLHTEEAGTVASQ*LLSSIS
Trigger: TGAAATTGATGACAGCAGCAACTGCGACGCAACTGT...TCCTGCCTCCTCCGTGTGAAGACATCCAACATCCACGTGACTTTTCCAGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp GTGGCCTCTGGGTCACTCCCTGTCACCCCAAATGCCAAACAACAAGAGCACATCTTTAGCGAGGCGTCCTaGGCTATAAAATGTCATGCA +
Preference number: 5 (lower is better)
Translates to: VASGSLPVTPNAKQQEHIFSEAS*AIKCHA
Trigger: TGCATGACATTTTATAGCCAAGGACGCCTCGCTAAA...GATGTGCTCTTGTTGTTTGGCATTTGGGGTGACAGGGAGTGACCCAGAGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp CAAAGTGCGCTTCTCTCCATTTTCCAAGAAACCAGTGTCTGTAACTCCTGCATGCGTGAGGAAGGACGTTaGCCCAAGAGCCAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: QSALLSIFQETSVCNSCMREEGR*PKSQWS
Trigger: TGACCACTGGCTCTTGGGCAAACGTCCTTCCTCACG...CATGCAGGAGTTACAGACACTGGTTTCTTGGAAAATGGAGAGAAGCGCACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS TCA 90 bp CGCAGTTGCTGCTGTCATCAATTTCAGCATTGTTGGCCAATCCGTTaGCCATGTTCCCGGCACCTTTTGTCCTCCTCTCAAAGCACTGAT +
Preference number: 5 (lower is better)
Translates to: RSCCCHQFQHCWPIR*PCSRHLLSSSQSTD
Trigger: ATCAGTGCTTTGAGAGGAGGACAAAAGGTGCCGGGAACATGGTCAACGGATTGGCCAACAATGCTGAAATTGATGACAGCAGCAACTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp TTTCTTCTCCTGTTCCTCAGTTGGGCACGTGCCCCATCCGTTAATGCTGGTTCGTCATCAATTTCAGCATaGTTGGCCAATCCGTTGACC +
Preference number: 5 (lower is better)
Translates to: FLLLFLSWARAPSVNAGSSSISA*LANPLT
Trigger: GGTCAACGGATTGGCCAACAATGCTGAAATTGATGA...CGAACCAGCATTAACGGATGGGGCACGTGCCCAACTGAGGAACAGGAGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp ACATCCATGCATACTCCAACACATCTGGGATGCAAGCCCAGACAACACGGCAGGTGCTTAATTGGGATTTaGATGGCCACCTCAGATTCC +
Preference number: 5 (lower is better)
Translates to: TSMHTPTHLGCKPRQHGRCLIGI*MATSDS
Trigger: GGAATCTGAGGTGGCCATCAAAATCCCAATTAAGCA...CCTGCCGTGTTGTCTGGGCTTGCATCCCAGATGTGTTGGAGTATGCATGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp CAAAGTGCGCTTCTCTCCATTTTCCAAGAAACCAGTGTCTGTAACTCCTGCATGACTCCCACATCGCCTTaGGTGATGAAGACCCCTATG +
Preference number: 5 (lower is better)
Translates to: QSALLSIFQETSVCNSCMTPTSP*VMKTPM
Trigger: CATAGGGGTCTTCATCACCAAAGGCGATGTGGGAGT...CATGCAGGAGTTACAGACACTGGTTTCTTGGAAAATGGAGAGAAGCGCACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp ACTCACAAGTCGGGGAAGCTTCTGTTTTTGACTGCCTGGCAGCTCATGGATGGGATGATCACTGATGCTTaGCGGTGGAAATTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: THKSGKLLFLTAWQLMDGMITDA*RWKFAF
Trigger: GAAAGCAAATTTCCACCGCAAAGCATCAGTGATCAT...CCCATCCATGAGCTGCCAGGCAGTCAAAAACAGAAGCTTCCCCGACTTGTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp CAAAGTGCGCTTCTCTCCATTTTCCAAGAAACCAGTGTCTGTAACTCCTGCATGAAAGTCACGTGGATGTaGGATGTCTTCACACGGAGG +
Preference number: 5 (lower is better)
Translates to: QSALLSIFQETSVCNSCMKVTWM*DVFTRR
Trigger: CCTCCGTGTGAAGACATCCAACATCCACGTGACTTT...CATGCAGGAGTTACAGACACTGGTTTCTTGGAAAATGGAGAGAAGCGCACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp AGTAAATACAAGGGACAGCACGGGCAAGAATCCACAGTTTCAATAAATACAAGTTCATTCTCTGTTTCGTaGCCAGCCTCAGCCACAACA +
Preference number: 5 (lower is better)
Translates to: SKYKGQHGQESTVSINTSSFSVS*PASATT
Trigger: TGTTGTGGCTGAGGCTGGCAACGAAACAGAGAATGA...ACTTGTATTTATTGAAACTGTGGATTCTTGCCCGTGCTGTCCCTTGTATTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp AGTAAATACAAGGGACAGCACGGGCAAGAATCCACAGTTTCAATAAATACAAGTTCAATTTCAGCATTGTaGGCCAATCCGTTGACCATG +
Preference number: 5 (lower is better)
Translates to: SKYKGQHGQESTVSINTSSISAL*ANPLTM
Trigger: CATGGTCAACGGATTGGCCAACAATGCTGAAATTGA...ACTTGTATTTATTGAAACTGTGGATTCTTGCCCGTGCTGTCCCTTGTATTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS-3UTR CAA 90 bp AGTAAATACAAGGGACAGCACGGGCAAGAATCCACAGTTTCAATAAATACAAGTAATCTTTGTCTCTCATaGATCAACATGCGACTGGCC +
Preference number: 5 (lower is better)
Translates to: SKYKGQHGQESTVSINTSNLCLS*INMRLA
Trigger: GGCCAGTCGCATGTTGATCAATGAGAGACAAAGATT...ACTTGTATTTATTGAAACTGTGGATTCTTGCCCGTGCTGTCCCTTGTATTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS GCA 72 bp AGGAGGAGGCACCCACAGCCCAGCTTCTTGTCCAGCTaGCACTTGTTCAGGTGGACGCCGAACACCGTGACA +
Preference number: 6 (lower is better)
Translates to: RRRHPQPSFLSS*HLFRWTPNTVT
Trigger: TGTCACGGTGTTCGGCGTCCACCTGAACAAGTGGCAGCTGGACAAGAAGCTGGGCTGTGGGTGCCTCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CAA 72 bp ACACCATACAGGAGGAGGCACCCACAGCCCAGCTTCTaGTCCAGCTGCCACTTGTTCAGGTGGACGCCGAAC +
Preference number: 6 (lower is better)
Translates to: TPYRRRHPQPSF*SSCHLFRWTPN
Trigger: GTTCGGCGTCCACCTGAACAAGTGGCAGCTGGACAAGAAGCTGGGCTGTGGGTGCCTCCTCCTGTATGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CAA 90 bp CACAGGAACACACCATACAGGAGGAGGCACCCACAGCCCAGCTTCTaGTCCAGCTGCCACTTGTTCAGGTGGACGCCGAACACCGTGACA +
Preference number: 6 (lower is better)
Translates to: HRNTPYRRRHPQPSF*SSCHLFRWTPNTVT
Trigger: TGTCACGGTGTTCGGCGTCCACCTGAACAAGTGGCAGCTGGACAAGAAGCTGGGCTGTGGGTGCCTCCTCCTGTATGGTGTGTTCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CCA 72 bp CAGCCCAGCTTCTTGTCCAGCTGCCACTTGTTCAGGTaGACGCCGAACACCGTGACAAAAACAGAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: QPSFLSSCHLFR*TPNTVTKTEAR
Trigger: CCTGGCCTCTGTTTTTGTCACGGTGTTCGGCGTCCACCTGAACAAGTGGCAGCTGGACAAGAAGCTGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS GCA 72 bp AGGCCAGGAGCAAGCCTACGGAGTAGATCAGCCCCCTaGTATTCAGCCGGATGTAGGATCCGTAATCCACAG +
Preference number: 6 (lower is better)
Translates to: RPGASLRSRSAP*YSAGCRIRNPQ
Trigger: CTGTGGATTACGGATCCTACATCCGGCTGAATAGCAGGGGGCTGATCTACTCCGTAGGCTTGCTCCTGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS TCA 72 bp CCATCATCCACTTTCTGTCTTCCCCTACGAGGTCCATaGGGTCAAGCTCCTTCTGCTCTCGCAGGCTCGACA +
Preference number: 6 (lower is better)
Translates to: PSSTFCLPLRGP*GQAPSALAGST
Trigger: TGTCGAGCCTGCGAGAGCAGAAGGAGCTTGACCTCATGGACCTCGTAGGGGAAGACAGAAAGTGGATGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CAA 72 bp GTTGCGTCGCAGTTGCTGCTGTCATCAATTTCAGCATaGTTGGCCAATCCGTTGACCATGTTCCCGGCACCT +
Preference number: 6 (lower is better)
Translates to: VASQLLLSSISA*LANPLTMFPAP
Trigger: AGGTGCCGGGAACATGGTCAACGGATTGGCCAACAATGCTGAAATTGATGACAGCAGCAACTGCGACGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CAA 90 bp ACCACAGTTGCGTCGCAGTTGCTGCTGTCATCAATTTCAGCATTGTaGGCCAATCCGTTGACCATGTTCCCGGCACCTTTTGTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: TTVASQLLLSSISAL*ANPLTMFPAPFVLL
Trigger: GAGGAGGACAAAAGGTGCCGGGAACATGGTCAACGGATTGGCCAACAATGCTGAAATTGATGACAGCAGCAACTGCGACGCAACTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CAA 90 bp AGCACCACAGTTGCGTCGCAGTTGCTGCTGTCATCAATTTCAGCATaGTTGGCCAATCCGTTGACCATGTTCCCGGCACCTTTTGTCCTC +
Preference number: 6 (lower is better)
Translates to: STTVASQLLLSSISA*LANPLTMFPAPFVL
Trigger: GAGGACAAAAGGTGCCGGGAACATGGTCAACGGATTGGCCAACAATGCTGAAATTGATGACAGCAGCAACTGCGACGCAACTGTGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS TCA 72 bp GGAGGACCACCGCACCTTGTCTTCTATCCTCGTTTGTaGAGATGTCATTGGGGAATTCATGCAGGGCTGGTT +
Preference number: 6 (lower is better)
Translates to: GGPPHLVFYPRL*RCHWGIHAGLV
Trigger: AACCAGCCCTGCATGAATTCCCCAATGACATCTTCACAAACGAGGATAGAAGACAAGGTGCGGTGGTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS TCA 72 bp GCTGGTGTGGGTAGGCTGACAGCAGCTCGTCTACCATaGTCACTGATGCTTTGCGGTGGAAATTTGCTTTCT +
Preference number: 6 (lower is better)
Translates to: AGVGRLTAARLP*SLMLCGGNLLS
Trigger: AGAAAGCAAATTTCCACCGCAAAGCATCAGTGATCATGGTAGACGAGCTGCTGTCAGCCTACCCACACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CAA 72 bp GCGTCGCAGTTGCTGCTGTCATCAATTTCAGCATTGTaGGCCAATCCGTTGACCATGTTCCCGGCACCTTTT +
Preference number: 6 (lower is better)
Translates to: ASQLLLSSISAL*ANPLTMFPAPF
Trigger: AAAAGGTGCCGGGAACATGGTCAACGGATTGGCCAACAATGCTGAAATTGATGACAGCAGCAACTGCGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CAA 72 bp GCACCTTGTCTTCTATCCTCGTTTGTGAAGATGTCATaGGGGAATTCATGCAGGGCTGGTTCGGTGCAGTTC +
Preference number: 6 (lower is better)
Translates to: APCLLSSFVKMS*GNSCRAGSVQF
Trigger: GAACTGCACCGAACCAGCCCTGCATGAATTCCCCAATGACATCTTCACAAACGAGGATAGAAGACAAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CAA 72 bp GTATATGGCACAGAGCACATGGAGGACCACCGCACCTaGTCTTCTATCCTCGTTTGTGAAGATGTCATTGGG +
Preference number: 6 (lower is better)
Translates to: VYGTEHMEDHRT*SSILVCEDVIG
Trigger: CCCAATGACATCTTCACAAACGAGGATAGAAGACAAGGTGCGGTGGTCCTCCATGTGCTCTGTGCCATATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CAA 72 bp CTGCTGTCATCAATTTCAGCATTGTTGGCCAATCCGTaGACCATGTTCCCGGCACCTTTTGTCCTCCTCTCA +
Preference number: 6 (lower is better)
Translates to: LLSSISALLANP*TMFPAPFVLLS
Trigger: TGAGAGGAGGACAAAAGGTGCCGGGAACATGGTCAACGGATTGGCCAACAATGCTGAAATTGATGACAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS TCA 72 bp TGCTGTCATCAATTTCAGCATTGTTGGCCAATCCGTTaGCCATGTTCCCGGCACCTTTTGTCCTCCTCTCAA +
Preference number: 6 (lower is better)
Translates to: CCHQFQHCWPIR*PCSRHLLSSSQ
Trigger: TTGAGAGGAGGACAAAAGGTGCCGGGAACATGGTCAACGGATTGGCCAACAATGCTGAAATTGATGACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CAA 90 bp CGGTGGAAATTTGCTTTCTTAAGTAGCACCACAGTTGCGTCGCAGTaGCTGCTGTCATCAATTTCAGCATTGTTGGCCAATCCGTTGACC +
Preference number: 6 (lower is better)
Translates to: RWKFAFLSSTTVASQ*LLSSISALLANPLT
Trigger: GGTCAACGGATTGGCCAACAATGCTGAAATTGATGACAGCAGCAACTGCGACGCAACTGTGGTGCTACTTAAGAAAGCAAATTTCCACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CAA 90 bp CCTTCATCATCATCCTCGTCCTCCTCTTCCTCCTCATCATTCTCATaGTCCTCATTTTCATTCTCTGTTTCGTTGCCAGCCTCAGCCACA +
Preference number: 6 (lower is better)
Translates to: PSSSSSSSSSSSSFS*SSFSFSVSLPASAT
Trigger: TGTGGCTGAGGCTGGCAACGAAACAGAGAATGAAAATGAGGACAATGAGAATGATGAGGAGGAAGAGGAGGACGAGGATGATGATGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CAA 72 bp GCTGACAGCAGCTCGTCTACCATGATCACTGATGCTTaGCGGTGGAAATTTGCTTTCTTAAGTAGCACCACA +
Preference number: 6 (lower is better)
Translates to: ADSSSSTMITDA*RWKFAFLSSTT
Trigger: TGTGGTGCTACTTAAGAAAGCAAATTTCCACCGCAAAGCATCAGTGATCATGGTAGACGAGCTGCTGTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CAA 90 bp ATAGAACATGTATATGGCACAGAGCACATGGAGGACCACCGCACCTaGTCTTCTATCCTCGTTTGTGAAGATGTCATTGGGGAATTCATG +
Preference number: 6 (lower is better)
Translates to: IEHVYGTEHMEDHRT*SSILVCEDVIGEFM
Trigger: CATGAATTCCCCAATGACATCTTCACAAACGAGGATAGAAGACAAGGTGCGGTGGTCCTCCATGTGCTCTGTGCCATATACATGTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS CAA 72 bp TTTGCTTTCTTAAGTAGCACCACAGTTGCGTCGCAGTaGCTGCTGTCATCAATTTCAGCATTGTTGGCCAAT +
Preference number: 6 (lower is better)
Translates to: FAFLSSTTVASQ*LLSSISALLAN
Trigger: ATTGGCCAACAATGCTGAAATTGATGACAGCAGCAACTGCGACGCAACTGTGGTGCTACTTAAGAAAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328041.11
CDS TCA 72 bp ATGTTCCCGGCACCTTTTGTCCTCCTCTCAAAGCACTaGTGTATGCAAGCGTTATATTTCATGATGACAATG +
Preference number: 6 (lower is better)
Translates to: MFPAPFVLLSKH*CMQALYFMMTM
Trigger: CATTGTCATCATGAAATATAACGCTTGCATACATCAGTGCTTTGAGAGGAGGACAAAAGGTGCCGGGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328041.11