RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC24A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000155886

Ensembl transcript IDs: ENST00000286344.3, ENST00000341998.6

Found 551 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCAGGCTGTGGAATCACTTGTGTCCCATCCAGTGAGGGAGCAGTaGTGTTGTAGGTCAGGCTCAGTGCACATGACTGATGTGGGAACG +
Preference number: 1 (lower is better)
Translates to: GQAVESLVSHPVREQ*CCRSGSVHMTDVGT
Trigger: CGTTCCCACATCAGTCATGTGCACTGAGCCTGACCTACAACAGCACTGCTCCCTCACTGGATGGGACACAAGTGATTCCACAGCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 90 bp GGGAATTGTCAGTTTGAGCCAAGCTGCTCTGCTGCCTTGGAAGTATaGGGGAGGGTAGGCGGTGACAGCAAGCAAGACCTGCTCGGTTTG +
Preference number: 1 (lower is better)
Translates to: GNCQFEPSCSAALEV*GRVGGDSKQDLLGL
Trigger: CAAACCGAGCAGGTCTTGCTTGCTGTCACCGCCTACCCTCCCCCATACTTCCAAGGCAGCAGAGCAGCTTGGCTCAAACTGACAATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 90 bp CAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTaGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCCTG +
Preference number: 1 (lower is better)
Translates to: QLPLLKRSRSPEPRV*RDHSCCWCKIWLFL
Trigger: CAGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
3UTR GCA 90 bp TGGTCCTGGTACCACTCGACCTGGCACTCAGAAACCTTCCTGGGGTaGACTGAGTGTGCAAATGCCTTTCCAAGCATCGCTAAGTTGCCT +
Preference number: 1 (lower is better)
Translates to: WSWYHSTWHSETFLG*TECANAFPSIAKLP
Trigger: AGGCAACTTAGCGATGCTTGGAAAGGCATTTGCACACTCAGTGCACCCCAGGAAGGTTTCTGAGTGCCAGGTCGAGTGGTACCAGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 90 bp AAGCCTGGTCCTGGTACCACTCGACCTGGCACTCAGAAACCTTCCTaGGGTGCACTGAGTGTGCAAATGCCTTTCCAAGCATCGCTAAGT +
Preference number: 1 (lower is better)
Translates to: KPGPGTTRPGTQKPS*GALSVQMPFQASLS
Trigger: ACTTAGCGATGCTTGGAAAGGCATTTGCACACTCAGTGCACCCCAGGAAGGTTTCTGAGTGCCAGGTCGAGTGGTACCAGGACCAGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 90 bp CTTGGAAGGCATTGTCCCACATCTGAAGACCCCAATCTGCCGAGTTaGAGAGACTTGAAAGCCAGCCTCCGACTGGCAGCCATCTTGATT +
Preference number: 1 (lower is better)
Translates to: LGRHCPTSEDPNLPS*RDLKASLRLAAILI
Trigger: AATCAAGATGGCTGCCAGTCGGAGGCTGGCTTTCAAGTCTCTCCAACTCGGCAGATTGGGGTCTTCAGATGTGGGACAATGCCTTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 90 bp GTTACAAGAACTTTAACCAAAGCCTGGTCCTGGTACCACTCGACCTaGCACTCAGAAACCTTCCTGGGGTGCACTGAGTGTGCAAATGCC +
Preference number: 1 (lower is better)
Translates to: VTRTLTKAWSWYHST*HSETFLGCTECANA
Trigger: GGCATTTGCACACTCAGTGCACCCCAGGAAGGTTTCTGAGTGCCAGGTCGAGTGGTACCAGGACCAGGCTTTGGTTAAAGTTCTTGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR GCA 90 bp GTGCCTGTGATTTCTACAGACGACTACATGCTCCGGGTGATTACATaGCACAACCTGCGCAGGTCCAAAGCTCCTGGTGAAAAAGGAATA +
Preference number: 1 (lower is better)
Translates to: VPVISTDDYMLRVIT*HNLRRSKAPGEKGI
Trigger: TATTCCTTTTTCACCAGGAGCTTTGGACCTGCGCAGGTTGTGGCATGTAATCACCCGGAGCATGTAGTCGTCTGTAGAAATCACAGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 90 bp CCTCTTTCTGTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTaGTGGAGGTGGGCAGATAGTCTCTCTGTTTGGCTTGTAGGAATG +
Preference number: 1 (lower is better)
Translates to: PLSVLSTLSFLVRVL*WRWADSLSVWLVGM
Trigger: CATTCCTACAAGCCAAACAGAGAGACTATCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACAGAAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 90 bp CTATTGGATGGTGTTTCAATGTCTTGGAAGGCATTGTCCCACATCTaGAGACCCCAATCTGCCGAGTTGGAGAGACTTGAAAGCCAGCCT +
Preference number: 1 (lower is better)
Translates to: LLDGVSMSWKALSHI*RPQSAELERLESQP
Trigger: AGGCTGGCTTTCAAGTCTCTCCAACTCGGCAGATTGGGGTCTTCAGATGTGGGACAATGCCTTCCAAGACATTGAAACACCATCCAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 90 bp AGAAGAGACATAGATGTTACAAGAACTTTAACCAAAGCCTGGTCCTaGTACCACTCGACCTGGCACTCAGAAACCTTCCTGGGGTGCACT +
Preference number: 1 (lower is better)
Translates to: RRDIDVTRTLTKAWS*YHSTWHSETFLGCT
Trigger: AGTGCACCCCAGGAAGGTTTCTGAGTGCCAGGTCGAGTGGTACCAGGACCAGGCTTTGGTTAAAGTTCTTGTAACATCTATGTCTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 90 bp GATGGAAGAAGAGACATAGATGTTACAAGAACTTTAACCAAAGCCTaGTCCTGGTACCACTCGACCTGGCACTCAGAAACCTTCCTGGGG +
Preference number: 1 (lower is better)
Translates to: DGRRDIDVTRTLTKA*SWYHSTWHSETFLG
Trigger: CCCCAGGAAGGTTTCTGAGTGCCAGGTCGAGTGGTACCAGGACCAGGCTTTGGTTAAAGTTCTTGTAACATCTATGTCTCTTCTTCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 90 bp CTTCAGCTTCAGTTCATCAGGATCTGGTCAGGTGCAGAGGGCAGCTaGAGTTGGCATGGGCATTCTCAGATGCAATTTAGGAGTTTCTAT +
Preference number: 1 (lower is better)
Translates to: LQLQFIRIWSGAEGS*SWHGHSQMQFRSFY
Trigger: ATAGAAACTCCTAAATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGACCAGATCCTGATGAACTGAAGCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 90 bp ATGTGCAGTGGTGGGGAGTTTGCCAACTCTCTCCCTGCCCAGGAATaGATGTACATTAACATTGTCAAATGTCTAATCAGCGAGGCAGCT +
Preference number: 1 (lower is better)
Translates to: MCSGGEFANSLPAQE*MYINIVKCLISEAA
Trigger: AGCTGCCTCGCTGATTAGACATTTGACAATGTTAATGTACATCCATTCCTGGGCAGGGAGAGAGTTGGCAAACTCCCCACCACTGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 90 bp GTCTTCTCAAATGCAACTTCACATGAAAGACCACAACACTTCCTGTaGAGTGGAGCTCCGAGACAAGCAAAGGGCACCATAGCTGCTTTG +
Preference number: 1 (lower is better)
Translates to: VFSNATSHERPQHFL*SGAPRQAKGTIAAL
Trigger: CAAAGCAGCTATGGTGCCCTTTGCTTGTCTCGGAGCTCCACTTCACAGGAAGTGTTGTGGTCTTTCATGTGAAGTTGCATTTGAGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 90 bp CTTTCTGTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTGGTaGAGGTGGGCAGATAGTCTCTCTGTTTGGCTTGTAGGAATGTTT +
Preference number: 1 (lower is better)
Translates to: LSVLSTLSFLVRVLW*RWADSLSVWLVGMF
Trigger: AAACATTCCTACAAGCCAAACAGAGAGACTATCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 90 bp ACCATCTACCTTACTAGGCAGGATCACAGCAAGTCCAAGGTAGGCTaGAGGTCACAGCAATGCTACCTTTGTCTTGTTGGTTCCATTAGT +
Preference number: 1 (lower is better)
Translates to: TIYLTRQDHSKSKVG*RSQQCYLCLVGSIS
Trigger: ACTAATGGAACCAACAAGACAAAGGTAGCATTGCTGTGACCTTCAGCCTACCTTGGACTTGCTGTGATCCTGCCTAGTAAGGTAGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 90 bp ATTCTCAGATGCAATTTAGGAGTTTCTATTTGGGAATTGTCAGTTTaGGCCAAGCTGCTCTGCTGCCTTGGAAGTATGGGGGAGGGTAGG +
Preference number: 1 (lower is better)
Translates to: ILRCNLGVSIWELSV*AKLLCCLGSMGEGR
Trigger: CCTACCCTCCCCCATACTTCCAAGGCAGCAGAGCAGCTTGGCTCAAACTGACAATTCCCAAATAGAAACTCCTAAATTGCATCTGAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR GCA 90 bp GCCACAACCTGCGCAGGTCCAAAGCTCCTGGTGAAAAAGGAATATTaGCATGGTGTAATCATAAGTAATAGAGTTGAGCTGGCTGTGAGT +
Preference number: 1 (lower is better)
Translates to: ATTCAGPKLLVKKEY*HGVIISNRVELAVS
Trigger: ACTCACAGCCAGCTCAACTCTATTACTTATGATTACACCATGGCAATATTCCTTTTTCACCAGGAGCTTTGGACCTGCGCAGGTTGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR GCA 90 bp TCTGGGGCTGTCAGGTTACCTTTCCTCTTATTCTGCTGTGAGTTCTaGATCCTGTCCTCTTATGTTAAGAGGTATGTGCTCACAACAAAA +
Preference number: 1 (lower is better)
Translates to: SGAVRLPFLLFCCEF*ILSSYVKRYVLTTK
Trigger: TTTTGTTGTGAGCACATACCTCTTAACATAAGAGGACAGGATGCAGAACTCACAGCAGAATAAGAGGAAAGGTAACCTGACAGCCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 90 bp AGAATGCAGAAACAAATTCCCATCCTTTTGGTGAACCCTGGCCCATaGGATCAATCAGTAGCTTTACAAATCCTATCCAACCTACCACAC +
Preference number: 1 (lower is better)
Translates to: RMQKQIPILLVNPGP*DQSVALQILSNLPH
Trigger: GTGTGGTAGGTTGGATAGGATTTGTAAAGCTACTGATTGATCTCATGGGCCAGGGTTCACCAAAAGGATGGGAATTTGTTTCTGCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 90 bp ATATGTGTACTTTGTGTTCAGGGTTCAATAGCGCAATTCAGTAACTaGGGCTCCCTCTTCCGAATAGAGTCTCAGCCCTTTAGAGAAACT +
Preference number: 1 (lower is better)
Translates to: ICVLCVQGSIAQFSN*GSLFRIESQPFRET
Trigger: AGTTTCTCTAAAGGGCTGAGACTCTATTCGGAAGAGGGAGCCTCAGTTACTGAATTGCGCTATTGAACCCTGAACACAAAGTACACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR GCA 90 bp TGCATGACTTTCCTTTTCCTTGACTTTGGCAAACTTGATGCTCCCTaGTTTAGAATCCTGAATGTGATAGGGTCAGAGGGTGATGATGTA +
Preference number: 1 (lower is better)
Translates to: CMTFLFLDFGKLDAP*FRILNVIGSEGDDV
Trigger: TACATCATCACCCTCTGACCCTATCACATTCAGGATTCTAAAGCAGGGAGCATCAAGTTTGCCAAAGTCAAGGAAAAGGAAAGTCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR GCA 90 bp TGCAGGGTCATTTTTGCCTCTCGAATGCTGCCTGACTTGTGGATTTaGTTGTCCTTTGTAGCTGCTTCTTACTCTTTCTTAAGAAATCTG +
Preference number: 1 (lower is better)
Translates to: CRVIFASRMLPDLWI*LSFVAASYSFLRNL
Trigger: CAGATTTCTTAAGAAAGAGTAAGAAGCAGCTACAAAGGACAAGCAAATCCACAAGTCAGGCAGCATTCGAGAGGCAAAAATGACCCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 90 bp TTCTGCAGAGCATTTAATGCAACTTCCATCTTCTTCAGCTCTATCTaGCCAGCCACTCTACCAGGTGTCTTTTCTTTGGTCAACTTTTTG +
Preference number: 1 (lower is better)
Translates to: FCRAFNATSIFFSSI*PATLPGVFSLVNFL
Trigger: CAAAAAGTTGACCAAAGAAAAGACACCTGGTAGAGTGGCTGGCCAGATAGAGCTGAAGAAGATGGAAGTTGCATTAAATGCTCTGCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 90 bp AATATCACTGGCCCTTGGTTCAGATACCCTTTCTTTAGGGCAATTTaGCCACTTAAGCATAAAATTGATGGGGTTGTCCAGTTTAGTACC +
Preference number: 1 (lower is better)
Translates to: NITGPWFRYPFFRAI*PLKHKIDGVVQFST
Trigger: GGTACTAAACTGGACAACCCCATCAATTTTATGCTTAAGTGGCCAAATTGCCCTAAAGAAAGGGTATCTGAACCAAGGGCCAGTGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 90 bp AACCTTATGAAATCAGGAAGAAATGTTCCCTTTGGTTTGTGTGCATaGCTTTCCTTTTCCTTGACTTTGGCAAACTTGATGCTCCCTGCT +
Preference number: 1 (lower is better)
Translates to: NLMKSGRNVPFGLCA*LSFSLTLANLMLPA
Trigger: AGCAGGGAGCATCAAGTTTGCCAAAGTCAAGGAAAAGGAAAGTCATGCACACAAACCAAAGGGAACATTTCTTCCTGATTTCATAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 90 bp CATCAGGTCTCCTTCAACTTCTGTTTTACATGGTCTGTTTGCAGTTaGGTCAGTCACCTATTTAAACCTTATTTCAAACAACGCACCAGT +
Preference number: 1 (lower is better)
Translates to: HQVSFNFCFTWSVCS*VSHLFKPYFKQRTS
Trigger: ACTGGTGCGTTGTTTGAAATAAGGTTTAAATAGGTGACTGACTCAACTGCAAACAGACCATGTAAAACAGAAGTTGAAGGAGACCTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR GCA 90 bp AAACAACCTTATGAAATCAGGAAGAAATGTTCCCTTTGGTTTGTGTaGATGACTTTCCTTTTCCTTGACTTTGGCAAACTTGATGCTCCC +
Preference number: 1 (lower is better)
Translates to: KQPYEIRKKCSLWFV*MTFLFLDFGKLDAP
Trigger: GGGAGCATCAAGTTTGCCAAAGTCAAGGAAAAGGAAAGTCATGCACACAAACCAAAGGGAACATTTCTTCCTGATTTCATAAGGTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 90 bp ATATGTAAGAATGCAGAAACAAATTCCCATCCTTTTGGTGAACCCTaGCCCATGAGATCAATCAGTAGCTTTACAAATCCTATCCAACCT +
Preference number: 1 (lower is better)
Translates to: ICKNAETNSHPFGEP*PMRSISSFTNPIQP
Trigger: AGGTTGGATAGGATTTGTAAAGCTACTGATTGATCTCATGGGCCAGGGTTCACCAAAAGGATGGGAATTTGTTTCTGCATTCTTACATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 90 bp ATGTTAAGAGGTATGTGCTCACAACAAAATCATAGCAGGCGTCAATaGCAGAATAGATTGGAGATAGGAACACATATGGTGAAATTTCCC +
Preference number: 1 (lower is better)
Translates to: MLRGMCSQQNHSRRQ*QNRLEIGTHMVKFP
Trigger: GGGAAATTTCACCATATGTGTTCCTATCTCCAATCTATTCTGTCATTGACGCCTGCTATGATTTTGTTGTGAGCACATACCTCTTAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 90 bp TTGTGTATTTTAGCGGAGAGGAGGAAAATAACCACCAAAGCATTATaGAATCTGCTGCTTTACATGTCCTCCCAAGGAAGGTTAGTAATT +
Preference number: 1 (lower is better)
Translates to: LCILAERRKITTKAL*NLLLYMSSQGRLVI
Trigger: AATTACTAACCTTCCTTGGGAGGACATGTAAAGCAGCAGATTTCATAATGCTTTGGTGGTTATTTTCCTCCTCTCCGCTAAAATACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 90 bp TTAGTTCACCTCTTGTACTTAAGAGGTAAAGCCCAGACTGCAAGTTaGTGCCCCTCTTCAAATAAGTACTATAAATATACTAGAGCTATC +
Preference number: 1 (lower is better)
Translates to: LVHLLYLRGKAQTAS*CPSSNKYYKYTRAI
Trigger: GATAGCTCTAGTATATTTATAGTACTTATTTGAAGAGGGGCATCAACTTGCAGTCTGGGCTTTACCTCTTAAGTACAAGAGGTGAACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 90 bp ACAGTGAAACAAGAAGAAACACCCTTTATCAGAATGAAGTCCATGTaGCAGAAGTACATACTTCAGACAGCCTATGTACAAATAAGTAGA +
Preference number: 1 (lower is better)
Translates to: TVKQEETPFIRMKSM*QKYILQTAYVQISR
Trigger: TCTACTTATTTGTACATAGGCTGTCTGAAGTATGTACTTCTGTCACATGGACTTCATTCTGATAAAGGGTGTTTCTTCTTGTTTCACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 90 bp CCTATCCAACCTACCACACAAAAGGATATAAACACACTGCAGTACTaGTTAATAAGTGGAGATCCAATCATTTATCCCAGTTTCATATTT +
Preference number: 1 (lower is better)
Translates to: PIQPTTQKDINTLQY*LISGDPIIYPSFIF
Trigger: AAATATGAAACTGGGATAAATGATTGGATCTCCACTTATTAACCAGTACTGCAGTGTGTTTATATCCTTTTGTGTGGTAGGTTGGATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 90 bp GTGATATTCTATGAATTGATTATCAGTAGTAGAAGCACAAAGGTATaGACAGTGAAACAAGAAGAAACACCCTTTATCAGAATGAAGTCC +
Preference number: 1 (lower is better)
Translates to: VIFYELIISSRSTKV*TVKQEETPFIRMKS
Trigger: GGACTTCATTCTGATAAAGGGTGTTTCTTCTTGTTTCACTGTCCATACCTTTGTGCTTCTACTACTGATAATCAATTCATAGAATATCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR TCA 90 bp TCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATTTAGGGGTGGAAGCAGCCTGTaGAGTGAATGGGCCCAGTGT +
Preference number: 2 (lower is better)
Translates to: SGAEGSWSWHGHSQMQFRGGSSL*SEWAQC
Trigger: ACACTGGGCCCATTCACTTCACAGGCTGCTTCCACC...CCTAAATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR GCA 90 bp TCTGGTCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATGGGCTGTGTGCCAGCTaGCTCTTCTCAAGAGGTCAA +
Preference number: 2 (lower is better)
Translates to: SGQVQRAAGVGMGILRCNGLCAS*LFSRGQ
Trigger: TTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCC...ATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR TCA 90 bp TCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATTTAGGGCATTGTCCCACATCTaGAGACCCCAATCTGCCGAG +
Preference number: 2 (lower is better)
Translates to: SGAEGSWSWHGHSQMQFRALSHI*RPQSAE
Trigger: CTCGGCAGATTGGGGTCTTCAGATGTGGGACAATGC...CCTAAATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR GCA 90 bp TCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATTTAGGGCCTGTGTCCTTGTTTaGATCGACTGTACCTCCGAC +
Preference number: 2 (lower is better)
Translates to: SGAEGSWSWHGHSQMQFRACVLV*IDCTSD
Trigger: GTCGGAGGTACAGTCGATGCAAACAAGGACACAGGC...CCTAAATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CAA 90 bp TTTCTATTTGGGAATTGTCAGTTTGAGCCAAGCTGCTCTGCTGCCTaGGAAGTATGGGGGAGGGTAGGCGGTGACAGCAAGCAAGACCTG +
Preference number: 2 (lower is better)
Translates to: FLFGNCQFEPSCSAA*EVWGRVGGDSKQDL
Trigger: CAGGTCTTGCTTGCTGTCACCGCCTACCCTCCCCCATACTTCCAAGGCAGCAGAGCAGCTTGGCTCAAACTGACAATTCCCAAATAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR TCA 90 bp TCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATTTAGGGACTGGCAGCCATCTTaGTTTCTTGTTTTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: SGAEGSWSWHGHSQMQFRDWQPS*FLVFPG
Trigger: CCCTGGGAAAACAAGAAATCAAGATGGCTGCCAGTC...CCTAAATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CAA 90 bp TGGCAGGTTCCACTCAGCGCCTCTATTGGATGGTGTTTCAATGTCTaGGAAGGCATTGTCCCACATCTGAAGACCCCAATCTGCCGAGTT +
Preference number: 2 (lower is better)
Translates to: WQVPLSASIGWCFNV*EGIVPHLKTPICRV
Trigger: AACTCGGCAGATTGGGGTCTTCAGATGTGGGACAATGCCTTCCAAGACATTGAAACACCATCCAATAGAGGCGCTGAGTGGAACCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR GCA 90 bp TGGTTGTTAATCATTGAGCTGGGTCACACCAGCATCTATGCTGGGATCTCCCCCGGGAGGAAAGCACACTaGCATGTTCTGAAATGCCTG +
Preference number: 2 (lower is better)
Translates to: WLLIIELGHTSIYAGISPGRKAH*HVLKCL
Trigger: CAGGCATTTCAGAACATGGCAGTGTGCTTTCCTCCC...GGGGGAGATCCCAGCATAGATGCTGGTGTGACCCAGCTCAATGATTAACAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CCA 90 bp ATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGACCATTCATGCTGCTaGTGCAAGATATGGCTTTTC +
Preference number: 2 (lower is better)
Translates to: ISPQIHQGGTLGTQGCVPDHSCC*CKIWLF
Trigger: GAAAAGCCATATCTTGCACCAGCAGCATGAATGGTC...TGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
3UTR CAA 90 bp CAGCCTGGGTTTTTACCTCTTTCTGTCCTAAGTACCCTGAGTTTCTaGGTCAGGGTACTCTGGTGGAGGTGGGCAGATAGTCTCTCTGTT +
Preference number: 2 (lower is better)
Translates to: QPGFLPLSVLSTLSF*VRVLWWRWADSLSV
Trigger: AACAGAGAGACTATCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACAGAAAGAGGTAAAAACCCAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CAA 90 bp CATTGTCCCACATCTGAAGACCCCAATCTGCCGAGTTGGAGAGACTaGAAAGCCAGCCTCCGACTGGCAGCCATCTTGATTTCTTGTTTT +
Preference number: 2 (lower is better)
Translates to: HCPTSEDPNLPSWRD*KASLRLAAILISCF
Trigger: AAAACAAGAAATCAAGATGGCTGCCAGTCGGAGGCTGGCTTTCAAGTCTCTCCAACTCGGCAGATTGGGGTCTTCAGATGTGGGACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR TCA 90 bp TCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATTTAGGCTGTACACATCTCTCTaGATTTACCCTGGCTCAACA +
Preference number: 2 (lower is better)
Translates to: SGAEGSWSWHGHSQMQFRLYTSL*IYPGST
Trigger: TGTTGAGCCAGGGTAAATTCAGAGAGATGTGTACAG...CCTAAATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR TCA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTGAGTTTGGGTGGTTCTaGGCAAGGCTGGTGCCCCAT +
Preference number: 2 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNAEFGWF*ARLVPH
Trigger: ATGGGGCACCAGCCTTGCTCAGAACCACCCAAACTC...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR GCA 90 bp ATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTCATTCATGCTGCTGGTaGAAGATATGGCTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: IHLSSNSPRRDTWHPGLCHSCCW*KIWLFL
Trigger: CAGGAAAAGCCATATCTTGCACCAGCAGCATGAATG...ACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
3UTR-3UTR GCA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTCTCCGGGTGATTACATaGCACAACCTGCGCAGGTCC +
Preference number: 2 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNALRVIT*HNLRRS
Trigger: GGACCTGCGCAGGTTGTGGCATGTAATCACCCGGAG...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR TCA 90 bp TCTGGTCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATAGCACCTTTACTGGATaGCTTCTTATTGCACATCTA +
Preference number: 2 (lower is better)
Translates to: SGQVQRAAGVGMGILRCNSTFTG*LLIAHL
Trigger: TAGATGTGCAATAAGAAGTCATCCAGTAAAGGTGCT...ATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR GCA 90 bp TCTTTCTTAAGAAATCTGTCCCTAGCCATATTAAGGGCCTCTGTGGAGTTTGGGCCAGTGAGGGAGCAGTaGTGTTGTAGGTCAGGCTCA +
Preference number: 2 (lower is better)
Translates to: SFLRNLSLAILRASVEFGPVREQ*CCRSGS
Trigger: TGAGCCTGACCTACAACAGCACTGCTCCCTCACTGG...CCCAAACTCCACAGAGGCCCTTAATATGGCTAGGGACAGATTTCTTAAGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR GCA 90 bp TCTGGTCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATGTATATACACAGGCATaGAGGAAACGAGTTAGAGAT +
Preference number: 2 (lower is better)
Translates to: SGQVQRAAGVGMGILRCNVYTQA*RKRVRD
Trigger: ATCTCTAACTCGTTTCCTGCATGCCTGTGTATATAC...ATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CCA 90 bp TCTGGTCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATAACTTAGACGTAGGATaGGTACAGAATAATGAACCA +
Preference number: 2 (lower is better)
Translates to: SGQVQRAAGVGMGILRCNNLDVG*VQNNEP
Trigger: TGGTTCATTATTCTGTACCCATCCTACGTCTAAGTT...ATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGACCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CAA 90 bp TGGAGTTGGCATGGGCATTCTCAGATGCAATTTAGGAGTTTCTATTaGGGAATTGTCAGTTTGAGCCAAGCTGCTCTGCTGCCTTGGAAG +
Preference number: 2 (lower is better)
Translates to: WSWHGHSQMQFRSFY*GIVSLSQAALLPWK
Trigger: CTTCCAAGGCAGCAGAGCAGCTTGGCTCAAACTGACAATTCCCAAATAGAAACTCCTAAATTGCATCTGAGAATGCCCATGCCAACTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR TCA 90 bp TCTTTCTTAAGAAATCTGTCCCTAGCCATATTAAGGGCCTCTGTGGAGTTTGGGCCTCTTATTCTGCTGTaGGTTCTGCATCCTGTCCTC +
Preference number: 2 (lower is better)
Translates to: SFLRNLSLAILRASVEFGPLILL*VLHPVL
Trigger: GAGGACAGGATGCAGAACTCACAGCAGAATAAGAGG...CCCAAACTCCACAGAGGCCCTTAATATGGCTAGGGACAGATTTCTTAAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR GCA 90 bp AAGACCACAACACTTCCTGTGAAGTGGAGCTCCGAGACAAGCAAAGGGCACCATCGTTTTAAAGAACTATaGCCTTACATCCCATTAGGT +
Preference number: 2 (lower is better)
Translates to: KTTTLPVKWSSETSKGHHRFKEL*PYIPLG
Trigger: ACCTAATGGGATGTAAGGGCATAGTTCTTTAAAACG...ATGGTGCCCTTTGCTTGTCTCGGAGCTCCACTTCACAGGAAGTGTTGTGGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR GCA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTAAAGGGCACCATAGCTaGTTTGATCAGCCTTCACTG +
Preference number: 2 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNAKGHHS*FDQPSL
Trigger: CAGTGAAGGCTGATCAAAGCAGCTATGGTGCCCTTT...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CCA 90 bp ATCTTTGGTGGAAGCCTAGGCAAACTCCATGGCATTCTTTCAGACTTAGATATTCCCAATCTGCCGAGTTaGAGAGACTTGAAAGCCAGC +
Preference number: 2 (lower is better)
Translates to: IFGGSLGKLHGILSDLDIPNLPS*RDLKAS
Trigger: GCTGGCTTTCAAGTCTCTCCAACTCGGCAGATTGGG...AATATCTAAGTCTGAAAGAATGCCATGGAGTTTGCCTAGGCTTCCACCAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CCA 90 bp GAGTATTTTGGAGAACTGTTAGTCTCCAAGGCCTTAGTTACTTATGGATCCATTCACCAGCATCTATGCTaGGATCTCCCCCGTAAGAGG +
Preference number: 2 (lower is better)
Translates to: EYFGELLVSKALVTYGSIHQHLC*DLPRKR
Trigger: CCTCTTACGGGGGAGATCCCAGCATAGATGCTGGTG...AATGGATCCATAAGTAACTAAGGCCTTGGAGACTAACAGTTCTCCAAAATACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR TCA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTCTGGGTGAAGAGGAATaGTGGGCATTTCCTGTTATT +
Preference number: 2 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNALGEEE*WAFPVI
Trigger: AATAACAGGAAATGCCCATCATTCCTCTTCACCCAG...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR TCA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTAGCAAGAGTGAGCACTaGCTTCTATGCATGCTTTCA +
Preference number: 2 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNASKSEH*LLCMLS
Trigger: TGAAAGCATGCATAGAAGTCAGTGCTCACTCTTGCT...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CCA 90 bp TATGTTATAGAGCAAATGTCTATGTTGGCGTCAACGTTGACAACATTTTCTTTGACCAAAGCCTGGTCCTaGTACCACTCGACCTGGCAC +
Preference number: 2 (lower is better)
Translates to: YVIEQMSMLASTLTTFSLTKAWS*YHSTWH
Trigger: GTGCCAGGTCGAGTGGTACCAGGACCAGGCTTTGGT...CAAAGAAAATGTTGTCAACGTTGACGCCAACATAGACATTTGCTCTATAACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CCA 90 bp GAGTATTTTGGAGAACTGTTAGTCTCCAAGGCCTTAGTTACTTATGGATCCATTTTCATTCCCATTAGGTaGCAGGTTCCACTCAGCGCC +
Preference number: 2 (lower is better)
Translates to: EYFGELLVSKALVTYGSIFIPIR*QVPLSA
Trigger: GGCGCTGAGTGGAACCTGCCACCTAATGGGAATGAA...AATGGATCCATAAGTAACTAAGGCCTTGGAGACTAACAGTTCTCCAAAATACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CCA 90 bp GAAACAAGAAGAAACACCCTTTATCAGAATGAAGTCCATGTGACAGAAGTACATCAGTTCATCAGGATCTaGTCAGGTGCAGAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: ETRRNTLYQNEVHVTEVHQFIRI*SGAEGS
Trigger: GCTGCCCTCTGCACCTGACCAGATCCTGATGAACTG...ATGTACTTCTGTCACATGGACTTCATTCTGATAAAGGGTGTTTCTTCTTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CCA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTCTCCCTGCCCAGGAATaGATGTACATTAACATTGTC +
Preference number: 2 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNALPAQE*MYINIV
Trigger: GACAATGTTAATGTACATCCATTCCTGGGCAGGGAG...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CAA 90 bp AGGGTCATTTTTGCCTCTCGAATGCTGCCTGACTTGTGGATTTGCTaGTCCTTTGTAGCTGCTTCTTACTCTTTCTTAAGAAATCTGTCC +
Preference number: 2 (lower is better)
Translates to: RVIFASRMLPDLWIC*SFVAASYSFLRNLS
Trigger: GGACAGATTTCTTAAGAAAGAGTAAGAAGCAGCTACAAAGGACAAGCAAATCCACAAGTCAGGCAGCATTCGAGAGGCAAAAATGACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR TCA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTCATAGCAGGCGTCAATaGCAGAATAGATTGGAGATA +
Preference number: 2 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNAHSRRQ*QNRLEI
Trigger: TATCTCCAATCTATTCTGTCATTGACGCCTGCTATG...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR GCA 90 bp GAGTATTTTGGAGAACTGTTAGTCTCCAAGGCCTTAGTTACTTATGGATCCATTGGCATTTCCTGTTATTaGCATGCTCTGTGGGGTGAG +
Preference number: 2 (lower is better)
Translates to: EYFGELLVSKALVTYGSIGISCY*HALWGE
Trigger: CTCACCCCACAGAGCATGGCAATAACAGGAAATGCC...AATGGATCCATAAGTAACTAAGGCCTTGGAGACTAACAGTTCTCCAAAATACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CCA 90 bp CATACTAGGTTAGAAATTGTGTATTTTAGCGGAGAGGAGGAAAATAACCACCAAAGCTATGTGCAGTGGTaGGGAGTTTGCCAACTCTCT +
Preference number: 2 (lower is better)
Translates to: HTRLEIVYFSGEEENNHQSYVQW*GVCQLS
Trigger: AGAGAGTTGGCAAACTCCCCACCACTGCACATAGCT...TTGGTGGTTATTTTCCTCCTCTCCGCTAAAATACACAATTTCTAACCTAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CAA 90 bp GTTGCCTCAACCCAAGCAGTGCTGATCAGAGTTAAGTTAGTGCTATaGGGAATAATGATTTCTTCAGACACTAAAGCCCTTTATGACTAC +
Preference number: 2 (lower is better)
Translates to: VASTQAVLIRVKLVL*GIMISSDTKALYDY
Trigger: GTAGTCATAAAGGGCTTTAGTGTCTGAAGAAATCATTATTCCCAATAGCACTAACTTAACTCTGATCAGCACTGCTTGGGTTGAGGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR TCA 90 bp ATCTTTGGTGGAAGCCTAGGCAAACTCCATGGCATTCTTTCAGACTTAGATATTTCCCAGATAAGGTCTTaGTGGAAGAAGAGACATAGA +
Preference number: 2 (lower is better)
Translates to: IFGGSLGKLHGILSDLDISQIRS*WKKRHR
Trigger: TCTATGTCTCTTCTTCCATCAAGACCTTATCTGGGA...AATATCTAAGTCTGAAAGAATGCCATGGAGTTTGCCTAGGCTTCCACCAAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR TCA 90 bp GAGTATTTTGGAGAACTGTTAGTCTCCAAGGCCTTAGTTACTTATGGATCCATTGTGTCTCCCCAATTTTaGGTTCTTTGTGAGTCTGAG +
Preference number: 2 (lower is better)
Translates to: EYFGELLVSKALVTYGSIVSPQF*VLCESE
Trigger: CTCAGACTCACAAAGAACTCAAAATTGGGGAGACAC...AATGGATCCATAAGTAACTAAGGCCTTGGAGACTAACAGTTCTCCAAAATACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR TCA 90 bp TATGTTATAGAGCAAATGTCTATGTTGGCGTCAACGTTGACAACATTTTCTTTGGCGCAATTCAGTAACTaGGGCTCCCTCTTCCGAATA +
Preference number: 2 (lower is better)
Translates to: YVIEQMSMLASTLTTFSLAQFSN*GSLFRI
Trigger: TATTCGGAAGAGGGAGCCTCAGTTACTGAATTGCGC...CAAAGAAAATGTTGTCAACGTTGACGCCAACATAGACATTTGCTCTATAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR GCA 90 bp ATCTTTGGTGGAAGCCTAGGCAAACTCCATGGCATTCTTTCAGACTTAGATATTTTCTGCTGTGAGTTCTaGATCCTGTCCTCTTATGTT +
Preference number: 2 (lower is better)
Translates to: IFGGSLGKLHGILSDLDIFCCEF*ILSSYV
Trigger: AACATAAGAGGACAGGATGCAGAACTCACAGCAGAA...AATATCTAAGTCTGAAAGAATGCCATGGAGTTTGCCTAGGCTTCCACCAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CCA 90 bp ATCTTTGGTGGAAGCCTAGGCAAACTCCATGGCATTCTTTCAGACTTAGATATTTGTGGGAACGGGGCTTaGAAATTTTGTCTTCTCAAA +
Preference number: 2 (lower is better)
Translates to: IFGGSLGKLHGILSDLDICGNGA*KFCLLK
Trigger: TTTGAGAAGACAAAATTTCCAAGCCCCGTTCCCACA...AATATCTAAGTCTGAAAGAATGCCATGGAGTTTGCCTAGGCTTCCACCAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CCA 90 bp TATGTTATAGAGCAAATGTCTATGTTGGCGTCAACGTTGACAACATTTTCTTTGTTCTTCAGCTCTATCTaGCCAGCCACTCTACCAGGT +
Preference number: 2 (lower is better)
Translates to: YVIEQMSMLASTLTTFSLFFSSI*PATLPG
Trigger: ACCTGGTAGAGTGGCTGGCCAGATAGAGCTGAAGAA...CAAAGAAAATGTTGTCAACGTTGACGCCAACATAGACATTTGCTCTATAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR TCA 90 bp GAAACAAGAAGAAACACCCTTTATCAGAATGAAGTCCATGTGACAGAAGTACATGGAGAAGCCCTGTATTaGCGGTTCTCTTTGTCTTTT +
Preference number: 2 (lower is better)
Translates to: ETRRNTLYQNEVHVTEVHGEALY*RFSLSF
Trigger: AAAAGACAAAGAGAACCGTCAATACAGGGCTTCTCC...ATGTACTTCTGTCACATGGACTTCATTCTGATAAAGGGTGTTTCTTCTTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR GCA 90 bp TATGTTATAGAGCAAATGTCTATGTTGGCGTCAACGTTGACAACATTTTCTTTGACATTCTGCTGCATCTaGCGAGGGTATAAACAACCC +
Preference number: 2 (lower is better)
Translates to: YVIEQMSMLASTLTTFSLTFCCI*RGYKQP
Trigger: GGGTTGTTTATACCCTCGGCAGATGCAGCAGAATGT...CAAAGAAAATGTTGTCAACGTTGACGCCAACATAGACATTTGCTCTATAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CCA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTTTGGAAACCACGGTGTaGAAAGTTCTTATAATTATG +
Preference number: 2 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNALETTV*KVLIIM
Trigger: CATAATTATAAGAACTTTCCACACCGTGGTTTCCAA...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CCA 90 bp CATACTAGGTTAGAAATTGTGTATTTTAGCGGAGAGGAGGAAAATAACCACCAAAGTGTGTACATTAGCTaGGGGGAGTCATTGTGGAAA +
Preference number: 2 (lower is better)
Translates to: HTRLEIVYFSGEEENNHQSVYIS*GESLWK
Trigger: TTTCCACAATGACTCCCCCCAGCTAATGTACACACT...TTGGTGGTTATTTTCCTCCTCTCCGCTAAAATACACAATTTCTAACCTAGTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CAA 90 bp TCAGATACCCTTTCTTTAGGGCAATTTGGCCACTTAAGCATAAAATaGATGGGGTTGTCCAGTTTAGTACCCATGTTTACTCTATATGGA +
Preference number: 2 (lower is better)
Translates to: SDTLSLGQFGHLSIK*MGLSSLVPMFTLYG
Trigger: TCCATATAGAGTAAACATGGGTACTAAACTGGACAACCCCATCAATTTTATGCTTAAGTGGCCAAATTGCCCTAAAGAAAGGGTATCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CCA 90 bp CATACTAGGTTAGAAATTGTGTATTTTAGCGGAGAGGAGGAAAATAACCACCAAACAGGCCCAGAGTTTTaGAGTAATCTAAAGTGGTGT +
Preference number: 2 (lower is better)
Translates to: HTRLEIVYFSGEEENNHQTGPEF*SNLKWC
Trigger: ACACCACTTTAGATTACTCCAAAACTCTGGGCCTGT...TTGGTGGTTATTTTCCTCCTCTCCGCTAAAATACACAATTTCTAACCTAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CAA 90 bp CTTTCTTTAGGGCAATTTGGCCACTTAAGCATAAAATTGATGGGGTaGTCCAGTTTAGTACCCATGTTTACTCTATATGGACAATTTAGG +
Preference number: 2 (lower is better)
Translates to: LSLGQFGHLSIKLMG*SSLVPMFTLYGQFR
Trigger: CCTAAATTGTCCATATAGAGTAAACATGGGTACTAAACTGGACAACCCCATCAATTTTATGCTTAAGTGGCCAAATTGCCCTAAAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR GCA 90 bp TATGTTATAGAGCAAATGTCTATGTTGGCGTCAACGTTGACAACATTTTCTTTGAATAACCAACTTGGTTaGCCTTCAAGAAATACACAG +
Preference number: 2 (lower is better)
Translates to: YVIEQMSMLASTLTTFSLNNQLG*PSRNTQ
Trigger: CTGTGTATTTCTTGAAGGGCAACCAAGTTGGTTATT...CAAAGAAAATGTTGTCAACGTTGACGCCAACATAGACATTTGCTCTATAACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp CAGTTTGAGCCAAGCTGCTCTGCTGCCTTGGAAGTATaGGGGAGGGTAGGCGGTGACAGCAAGCAAGACCTG +
Preference number: 3 (lower is better)
Translates to: QFEPSCSAALEV*GRVGGDSKQDL
Trigger: CAGGTCTTGCTTGCTGTCACCGCCTACCCTCCCCCATACTTCCAAGGCAGCAGAGCAGCTTGGCTCAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 72 bp AAGGGCAGGCTGTGGAATCACTTGTGTCCCATCCAGTaGGGGAGCAGTGCTGTTGTAGGTCAGGCTCAGTGC +
Preference number: 3 (lower is better)
Translates to: KGRLWNHLCPIQ*GSSAVVGQAQC
Trigger: GCACTGAGCCTGACCTACAACAGCACTGCTCCCTCACTGGATGGGACACAAGTGATTCCACAGCCTGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 72 bp CTCTGCTGCCTTGGAAGTATGGGGGAGGGTAGGCGGTaGCAGCAAGCAAGACCTGCTCGGTTTGCTGTGAAT +
Preference number: 3 (lower is better)
Translates to: LCCLGSMGEGRR*QQARPARFAVN
Trigger: ATTCACAGCAAACCGAGCAGGTCTTGCTTGCTGTCACCGCCTACCCTCCCCCATACTTCCAAGGCAGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp CATTGTCCCACATCTGAAGACCCCAATCTGCCGAGTTaGAGAGACTTGAAAGCCAGCCTCCGACTGGCAGCC +
Preference number: 3 (lower is better)
Translates to: HCPTSEDPNLPS*RDLKASLRLAA
Trigger: GGCTGCCAGTCGGAGGCTGGCTTTCAAGTCTCTCCAACTCGGCAGATTGGGGTCTTCAGATGTGGGACAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp CTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTaGAGGGACCATTCATGCTGCTGGTGCAAGATATGG +
Preference number: 3 (lower is better)
Translates to: LLKRSRSPEPRV*RDHSCCWCKIW
Trigger: CCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
3UTR CCA 72 bp CCTGGTACCACTCGACCTGGCACTCAGAAACCTTCCTaGGGTGCACTGAGTGTGCAAATGCCTTTCCAAGCA +
Preference number: 3 (lower is better)
Translates to: PGTTRPGTQKPS*GALSVQMPFQA
Trigger: TGCTTGGAAAGGCATTTGCACACTCAGTGCACCCCAGGAAGGTTTCTGAGTGCCAGGTCGAGTGGTACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp TCTGTCCCTAGCCATATTAAGGGCCTCTGTGGAGTTTaGGTGGTTCTGAGCAAGGCTGGTGCCCCATGTGTG +
Preference number: 3 (lower is better)
Translates to: SVPSHIKGLCGV*VVLSKAGAPCV
Trigger: CACACATGGGGCACCAGCCTTGCTCAGAACCACCCAAACTCCACAGAGGCCCTTAATATGGCTAGGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp ACTTTAACCAAAGCCTGGTCCTGGTACCACTCGACCTaGCACTCAGAAACCTTCCTGGGGTGCACTGAGTGT +
Preference number: 3 (lower is better)
Translates to: TLTKAWSWYHST*HSETFLGCTEC
Trigger: ACACTCAGTGCACCCCAGGAAGGTTTCTGAGTGCCAGGTCGAGTGGTACCAGGACCAGGCTTTGGTTAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp ACACCATCTGATCTTCAGCTTCAGTTCATCAGGATCTaGTCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGG +
Preference number: 3 (lower is better)
Translates to: TPSDLQLQFIRI*SGAEGSWSWHG
Trigger: CCCATGCCAACTCCAGCTGCCCTCTGCACCTGACCAGATCCTGATGAACTGAAGCTGAAGATCAGATGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CAA 90 bp TGTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTGGTGGAGGTGGGCAGAACCAGCGAGGTGTACTaGTCAGTGGTGAATAGGGAG +
Preference number: 3 (lower is better)
Translates to: CPKYPEFLGQGTLVEVGRTSEVY*SVVNRE
Trigger: CTCCCTATTCACCACTGACAAGTACACCTCGCTGGT...TCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CAA 90 bp TCTGGTCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATGAAGGAATACTGAGCTaGATCTGGGGCTGTCAGGTT +
Preference number: 3 (lower is better)
Translates to: SGQVQRAAGVGMGILRCNEGILS*IWGCQV
Trigger: AACCTGACAGCCCCAGATCAAGCTCAGTATTCCTTC...ATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 72 bp GGGAGCAGTGCTGTTGTAGGTCAGGCTCAGTGCACATaGCTGATGTGGGAACGGGGCTTGGAAATTTTGTCT +
Preference number: 3 (lower is better)
Translates to: GSSAVVGQAQCT*LMWERGLEILS
Trigger: AGACAAAATTTCCAAGCCCCGTTCCCACATCAGTCATGTGCACTGAGCCTGACCTACAACAGCACTGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR GCA 72 bp GTGGAATCACTTGTGTCCCATCCAGTGAGGGAGCAGTaGTGTTGTAGGTCAGGCTCAGTGCACATGACTGAT +
Preference number: 3 (lower is better)
Translates to: VESLVSHPVREQ*CCRSGSVHMTD
Trigger: ATCAGTCATGTGCACTGAGCCTGACCTACAACAGCACTGCTCCCTCACTGGATGGGACACAAGTGATTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR GCA 72 bp CTTCTCTCACTGTTCCAGAGGCCTTTAAAAGCTATGTaGAGTGGTGGGGAGTTTGCCAACTCTCTCCCTGCC +
Preference number: 3 (lower is better)
Translates to: LLSLFQRPLKAM*SGGEFANSLPA
Trigger: GGCAGGGAGAGAGTTGGCAAACTCCCCACCACTGCACATAGCTTTTAAAGGCCTCTGGAACAGTGAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp CAGTTCATCAGGATCTGGTCAGGTGCAGAGGGCAGCTaGAGTTGGCATGGGCATTCTCAGATGCAATTTAGG +
Preference number: 3 (lower is better)
Translates to: QFIRIWSGAEGS*SWHGHSQMQFR
Trigger: CCTAAATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGACCAGATCCTGATGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CAA 90 bp TGGTTGTTAATCATTGAGCTGGGTCACACCAGCATCTATGCTGGGATCTCCCCCAGCCTGTGTCCTTGTTaGCATCGACTGTACCTCCGA +
Preference number: 3 (lower is better)
Translates to: WLLIIELGHTSIYAGISPSLCPC*HRLYLR
Trigger: TCGGAGGTACAGTCGATGCAAACAAGGACACAGGCT...GGGGGAGATCCCAGCATAGATGCTGGTGTGACCCAGCTCAATGATTAACAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CAA 90 bp TGTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTGGTGGAGGTGGGCAGAGCTTGTAGGAATGTTTaGGAAGGCTCAACTCAGGGC +
Preference number: 3 (lower is better)
Translates to: CPKYPEFLGQGTLVEVGRACRNV*EGSTQG
Trigger: GCCCTGAGTTGAGCCTTCCAAAACATTCCTACAAGC...TCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR GCA 72 bp GAGTTTCTATTTGGGAATTGTCAGTTTGAGCCAAGCTaGTCTGCTGCCTTGGAAGTATGGGGGAGGGTAGGC +
Preference number: 3 (lower is better)
Translates to: EFLFGNCQFEPS*SAALEVWGRVG
Trigger: GCCTACCCTCCCCCATACTTCCAAGGCAGCAGAGCAGCTTGGCTCAAACTGACAATTCCCAAATAGAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR GCA 72 bp GAGGCCTTTAAAAGCTATGTGCAGTGGTGGGGAGTTTaGCAACTCTCTCCCTGCCCAGGAATGGATGTACAT +
Preference number: 3 (lower is better)
Translates to: EAFKSYVQWWGV*QLSPCPGMDVH
Trigger: ATGTACATCCATTCCTGGGCAGGGAGAGAGTTGGCAAACTCCCCACCACTGCACATAGCTTTTAAAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR GCA 72 bp ATTTCTACAGACGACTACATGCTCCGGGTGATTACATaGCACAACCTGCGCAGGTCCAAAGCTCCTGGTGAA +
Preference number: 3 (lower is better)
Translates to: ISTDDYMLRVIT*HNLRRSKAPGE
Trigger: TTCACCAGGAGCTTTGGACCTGCGCAGGTTGTGGCATGTAATCACCCGGAGCATGTAGTCGTCTGTAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp ACCCTGAGTTTCTTGGTCAGGGTACTCTGGTGGAGGTaGGCAGATAGTCTCTCTGTTTGGCTTGTAGGAATG +
Preference number: 3 (lower is better)
Translates to: TLSFLVRVLWWR*ADSLSVWLVGM
Trigger: CATTCCTACAAGCCAAACAGAGAGACTATCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp GTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTaGTGGAGGTGGGCAGATAGTCTCTCTGTTTGGCTT +
Preference number: 3 (lower is better)
Translates to: VLSTLSFLVRVL*WRWADSLSVWL
Trigger: AAGCCAAACAGAGAGACTATCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 72 bp GTCAAATGTCTAATCAGCGAGGCAGCTGCGTTTTGCTaGAAGGGCTCCAAACCACCTGATTCATGTCTTCCC +
Preference number: 3 (lower is better)
Translates to: VKCLISEAAAFC*KGSKPPDSCLP
Trigger: GGGAAGACATGAATCAGGTGGTTTGGAGCCCTTTCAGCAAAACGCAGCTGCCTCGCTGATTAGACATTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR GCA 72 bp TCTTCTGGGCAAGGCTTTAGGACATTCTGCTGCATCTaGCGAGGGTATAAACAACCCTATCCCTTAGTCCCT +
Preference number: 3 (lower is better)
Translates to: SSGQGFRTFCCI*RGYKQPYPLVP
Trigger: AGGGACTAAGGGATAGGGTTGTTTATACCCTCGGCAGATGCAGCAGAATGTCCTAAAGCCTTGCCCAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp GCAGATAGTCTCTCTGTTTGGCTTGTAGGAATGTTTTaGAAGGCTCAACTCAGGGCCCCTACAGACCTTCTC +
Preference number: 3 (lower is better)
Translates to: ADSLSVWLVGMF*KAQLRAPTDLL
Trigger: GAGAAGGTCTGTAGGGGCCCTGAGTTGAGCCTTCCAAAACATTCCTACAAGCCAAACAGAGAGACTATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp CTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTGGTaGAGGTGGGCAGATAGTCTCTCTGTTTGGCTTGTA +
Preference number: 3 (lower is better)
Translates to: LSTLSFLVRVLW*RWADSLSVWLV
Trigger: TACAAGCCAAACAGAGAGACTATCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CAA 90 bp TCTGGTCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATCACACAATAACCAACTaGGTTGCCCTTCAAGAAATA +
Preference number: 3 (lower is better)
Translates to: SGQVQRAAGVGMGILRCNHTITN*VALQEI
Trigger: TATTTCTTGAAGGGCAACCAAGTTGGTTATTGTGTG...ATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CAA 90 bp TGGTTGTTAATCATTGAGCTGGGTCACACCAGCATCTATGCTGGGATCTCCCCCGAGAACAGCTTCACTTaGTTTCTTCTGGAACACAGC +
Preference number: 3 (lower is better)
Translates to: WLLIIELGHTSIYAGISPENSFT*FLLEHS
Trigger: GCTGTGTTCCAGAAGAAACAAAGTGAAGCTGTTCTC...GGGGGAGATCCCAGCATAGATGCTGGTGTGACCCAGCTCAATGATTAACAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 72 bp GGTGTTTCAATGTCTTGGAAGGCATTGTCCCACATCTaGAGACCCCAATCTGCCGAGTTGGAGAGACTTGAA +
Preference number: 3 (lower is better)
Translates to: GVSMSWKALSHI*RPQSAELERLE
Trigger: TTCAAGTCTCTCCAACTCGGCAGATTGGGGTCTTCAGATGTGGGACAATGCCTTCCAAGACATTGAAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR GCA 72 bp AGGCCCACTAAGCACCTTTACTGGATGACTTCTTATTaGACATCTAGGCTCTCTTGGCAGCCCTTAGCATCA +
Preference number: 3 (lower is better)
Translates to: RPTKHLYWMTSY*TSRLSWQPLAS
Trigger: TGATGCTAAGGGCTGCCAAGAGAGCCTAGATGTGCAATAAGAAGTCATCCAGTAAAGGTGCTTAGTGGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp ATTAGGTGGCAGGTTCCACTCAGCGCCTCTATTGGATaGTGTTTCAATGTCTTGGAAGGCATTGTCCCACAT +
Preference number: 3 (lower is better)
Translates to: IRWQVPLSASIG*CFNVLEGIVPH
Trigger: ATGTGGGACAATGCCTTCCAAGACATTGAAACACCATCCAATAGAGGCGCTGAGTGGAACCTGCCACCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CAA 90 bp GAGTATTTTGGAGAACTGTTAGTCTCCAAGGCCTTAGTTACTTATGGATCCATTAGCTGCTCTGCTGCCTaGGAAGTATGGGGGAGGGTA +
Preference number: 3 (lower is better)
Translates to: EYFGELLVSKALVTYGSISCSAA*EVWGRV
Trigger: TACCCTCCCCCATACTTCCAAGGCAGCAGAGCAGCT...AATGGATCCATAAGTAACTAAGGCCTTGGAGACTAACAGTTCTCCAAAATACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 72 bp AATGCAACTTCACATGAAAGACCACAACACTTCCTGTaGAGTGGAGCTCCGAGACAAGCAAAGGGCACCATA +
Preference number: 3 (lower is better)
Translates to: NATSHERPQHFL*SGAPRQAKGTI
Trigger: TATGGTGCCCTTTGCTTGTCTCGGAGCTCCACTTCACAGGAAGTGTTGTGGTCTTTCATGTGAAGTTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR GCA 72 bp GTTTGTGACCTTGACTTCACCAGAGCTTCATGGTCATaGTGCACCCAGTATAGTTCAACACTGTTCAGACAG +
Preference number: 3 (lower is better)
Translates to: VCDLDFTRASWS*CTQYSSTLFRQ
Trigger: CTGTCTGAACAGTGTTGAACTATACTGGGTGCAGCATGACCATGAAGCTCTGGTGAAGTCAAGGTCACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp ATAGATGTTACAAGAACTTTAACCAAAGCCTGGTCCTaGTACCACTCGACCTGGCACTCAGAAACCTTCCTG +
Preference number: 3 (lower is better)
Translates to: IDVTRTLTKAWS*YHSTWHSETFL
Trigger: CAGGAAGGTTTCTGAGTGCCAGGTCGAGTGGTACCAGGACCAGGCTTTGGTTAAAGTTCTTGTAACATCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp AGAGGCAGAGTCAGGGAGCTAACAGTAAATAGAAGGTaGAATAGGGCAGGGTTACTTTTCTTACCCAAGGTC +
Preference number: 3 (lower is better)
Translates to: RGRVRELTVNRR*NRAGLLFLPKV
Trigger: GACCTTGGGTAAGAAAAGTAACCCTGCCCTATTCCACCTTCTATTTACTGTTAGCTCCCTGACTCTGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 72 bp TGCAATTTAGGAGTTTCTATTTGGGAATTGTCAGTTTaGGCCAAGCTGCTCTGCTGCCTTGGAAGTATGGGG +
Preference number: 3 (lower is better)
Translates to: CNLGVSIWELSV*AKLLCCLGSMG
Trigger: CCCCATACTTCCAAGGCAGCAGAGCAGCTTGGCTCAAACTGACAATTCCCAAATAGAAACTCCTAAATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp GCATTTAATGCAACTTCCATCTTCTTCAGCTCTATCTaGCCAGCCACTCTACCAGGTGTCTTTTCTTTGGTC +
Preference number: 3 (lower is better)
Translates to: AFNATSIFFSSI*PATLPGVFSLV
Trigger: GACCAAAGAAAAGACACCTGGTAGAGTGGCTGGCCAGATAGAGCTGAAGAAGATGGAAGTTGCATTAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp GGCCCTTGGTTCAGATACCCTTTCTTTAGGGCAATTTaGCCACTTAAGCATAAAATTGATGGGGTTGTCCAG +
Preference number: 3 (lower is better)
Translates to: GPWFRYPFFRAI*PLKHKIDGVVQ
Trigger: CTGGACAACCCCATCAATTTTATGCTTAAGTGGCCAAATTGCCCTAAAGAAAGGGTATCTGAACCAAGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 72 bp TCACATAGCGGTAACTTCCAACTATGGGGCAAAGAGTaGAGAGTGCCCAGATGCAGTTACTTTTTGCCAAAA +
Preference number: 3 (lower is better)
Translates to: SHSGNFQLWGKE*RVPRCSYFLPK
Trigger: TTTTGGCAAAAAGTAACTGCATCTGGGCACTCTTCACTCTTTGCCCCATAGTTGGAAGTTACCGCTATGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 72 bp TTAGCGGAGAGGAGGAAAATAACCACCAAAGCATTATaGAATCTGCTGCTTTACATGTCCTCCCAAGGAAGG +
Preference number: 3 (lower is better)
Translates to: LAERRKITTKAL*NLLLYMSSQGR
Trigger: CCTTCCTTGGGAGGACATGTAAAGCAGCAGATTTCATAATGCTTTGGTGGTTATTTTCCTCCTCTCCGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR GCA 72 bp TGTGGCTTAGCAAGAGTGAGCACTGACTTCTATGCATaGTTTCAGGAGACAGTAGTTTTCTCCAGAAATCAC +
Preference number: 3 (lower is better)
Translates to: CGLARVSTDFYA*FQETVVFSRNH
Trigger: GTGATTTCTGGAGAAAACTACTGTCTCCTGAAAGCATGCATAGAAGTCAGTGCTCACTCTTGCTAAGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR GCA 72 bp TGCGCAGGTCCAAAGCTCCTGGTGAAAAAGGAATATTaGCATGGTGTAATCATAAGTAATAGAGTTGAGCTG +
Preference number: 3 (lower is better)
Translates to: CAGPKLLVKKEY*HGVIISNRVEL
Trigger: CAGCTCAACTCTATTACTTATGATTACACCATGGCAATATTCCTTTTTCACCAGGAGCTTTGGACCTGCGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 72 bp GGTATGTGCTCACAACAAAATCATAGCAGGCGTCAATaGCAGAATAGATTGGAGATAGGAACACATATGGTG +
Preference number: 3 (lower is better)
Translates to: GMCSQQNHSRRQ*QNRLEIGTHMV
Trigger: CACCATATGTGTTCCTATCTCCAATCTATTCTGTCATTGACGCCTGCTATGATTTTGTTGTGAGCACATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 72 bp TCGTTAAGGAATATGTGGCTTAGCAAGAGTGAGCACTaGCTTCTATGCATGCTTTCAGGAGACAGTAGTTTT +
Preference number: 3 (lower is better)
Translates to: SLRNMWLSKSEH*LLCMLSGDSSF
Trigger: AAAACTACTGTCTCCTGAAAGCATGCATAGAAGTCAGTGCTCACTCTTGCTAAGCCACATATTCCTTAACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp GCTAGACAAACCCTCTTAATGGAATTAAATCTTTGGTaGAAGCCTAGGCAAACTCCATGGCATTCTTTCAGA +
Preference number: 3 (lower is better)
Translates to: ARQTLLMELNLW*KPRQTPWHSFR
Trigger: TCTGAAAGAATGCCATGGAGTTTGCCTAGGCTTCCACCAAAGATTTAATTCCATTAAGAGGGTTTGTCTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp AATGCAGAAACAAATTCCCATCCTTTTGGTGAACCCTaGCCCATGAGATCAATCAGTAGCTTTACAAATCCT +
Preference number: 3 (lower is better)
Translates to: NAETNSHPFGEP*PMRSISSFTNP
Trigger: AGGATTTGTAAAGCTACTGATTGATCTCATGGGCCAGGGTTCACCAAAAGGATGGGAATTTGTTTCTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CAA 90 bp GAGTATTTTGGAGAACTGTTAGTCTCCAAGGCCTTAGTTACTTATGGATCCATTGCTACCTTTGTCTTGTaGGTTCCATTAGTTCACCTC +
Preference number: 3 (lower is better)
Translates to: EYFGELLVSKALVTYGSIATFVL*VPLVHL
Trigger: GAGGTGAACTAATGGAACCAACAAGACAAAGGTAGC...AATGGATCCATAAGTAACTAAGGCCTTGGAGACTAACAGTTCTCCAAAATACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CAA 90 bp CATACTAGGTTAGAAATTGTGTATTTTAGCGGAGAGGAGGAAAATAACCACCAACTTACCCCTCTTCTTTaGATGATAATGGGACATGCG +
Preference number: 3 (lower is better)
Translates to: HTRLEIVYFSGEEENNHQLTPLL*MIMGHA
Trigger: CGCATGTCCCATTATCATCAAAAGAAGAGGGGTAAG...TTGGTGGTTATTTTCCTCCTCTCCGCTAAAATACACAATTTCTAACCTAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CAA 90 bp GAAACAAGAAGAAACACCCTTTATCAGAATGAAGTCCATGTGACAGAAGTACATTCCTTTTCCTTGACTTaGGCAAACTTGATGCTCCCT +
Preference number: 3 (lower is better)
Translates to: ETRRNTLYQNEVHVTEVHSFSLT*ANLMLP
Trigger: AGGGAGCATCAAGTTTGCCAAAGTCAAGGAAAAGGA...ATGTACTTCTGTCACATGGACTTCATTCTGATAAAGGGTGTTTCTTCTTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp TACTGGATGACTTCTTATTGCACATCTAGGCTCTCTTaGCAGCCCTTAGCATCAAAATATATCTACATGACA +
Preference number: 3 (lower is better)
Translates to: YWMTSYCTSRLS*QPLASKYIYMT
Trigger: TGTCATGTAGATATATTTTGATGCTAAGGGCTGCCAAGAGAGCCTAGATGTGCAATAAGAAGTCATCCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CAA 90 bp TATGTTATAGAGCAAATGTCTATGTTGGCGTCAACGTTGACAACATTTTCTTTGGGTGTCATACAGAACTaGGGGGCGTGGAATATTTTA +
Preference number: 3 (lower is better)
Translates to: YVIEQMSMLASTLTTFSLGVIQN*GAWNIL
Trigger: TAAAATATTCCACGCCCCCAAGTTCTGTATGACACC...CAAAGAAAATGTTGTCAACGTTGACGCCAACATAGACATTTGCTCTATAACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 72 bp CAAGAAGAAACACCCTTTATCAGAATGAAGTCCATGTaGCAGAAGTACATACTTCAGACAGCCTATGTACAA +
Preference number: 3 (lower is better)
Translates to: QEETPFIRMKSM*QKYILQTAYVQ
Trigger: TTGTACATAGGCTGTCTGAAGTATGTACTTCTGTCACATGGACTTCATTCTGATAAAGGGTGTTTCTTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp TGGAGAACTGTTAGTCTCCAAGGCCTTAGTTACTTATaGATCCATTATGAAGGAATATGCAACCCAATATGT +
Preference number: 3 (lower is better)
Translates to: WRTVSLQGLSYL*IHYEGICNPIC
Trigger: ACATATTGGGTTGCATATTCCTTCATAATGGATCCATAAGTAACTAAGGCCTTGGAGACTAACAGTTCTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR TCA 72 bp CTCTTGTACTTAAGAGGTAAAGCCCAGACTGCAAGTTaGTGCCCCTCTTCAAATAAGTACTATAAATATACT +
Preference number: 3 (lower is better)
Translates to: LLYLRGKAQTAS*CPSSNKYYKYT
Trigger: AGTATATTTATAGTACTTATTTGAAGAGGGGCATCAACTTGCAGTCTGGGCTTTACCTCTTAAGTACAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR GCA 72 bp TATGAAATCAGGAAGAAATGTTCCCTTTGGTTTGTGTaGATGACTTTCCTTTTCCTTGACTTTGGCAAACTT +
Preference number: 3 (lower is better)
Translates to: YEIRKKCSLWFV*MTFLFLDFGKL
Trigger: AAGTTTGCCAAAGTCAAGGAAAAGGAAAGTCATGCACACAAACCAAAGGGAACATTTCTTCCTGATTTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp TTCCCATATGCCATATGTACCAACTTAGACGTAGGATaGGTACAGAATAATGAACCATCCTTGATTCAATTT +
Preference number: 3 (lower is better)
Translates to: FPYAICTNLDVG*VQNNEPSLIQF
Trigger: AAATTGAATCAAGGATGGTTCATTATTCTGTACCCATCCTACGTCTAAGTTGGTACATATGGCATATGGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR-3UTR CAA 90 bp CATACTAGGTTAGAAATTGTGTATTTTAGCGGAGAGGAGGAAAATAACCACCAAGGTGAAAAAGGAATATaGCCATGGTGTAATCATAAG +
Preference number: 3 (lower is better)
Translates to: HTRLEIVYFSGEEENNHQGEKGI*PWCNHK
Trigger: CTTATGATTACACCATGGCAATATTCCTTTTTCACC...TTGGTGGTTATTTTCCTCCTCTCCGCTAAAATACACAATTTCTAACCTAGTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CCA 72 bp TATGAATTGATTATCAGTAGTAGAAGCACAAAGGTATaGACAGTGAAACAAGAAGAAACACCCTTTATCAGA +
Preference number: 3 (lower is better)
Translates to: YELIISSRSTKV*TVKQEETPFIR
Trigger: TCTGATAAAGGGTGTTTCTTCTTGTTTCACTGTCCATACCTTTGTGCTTCTACTACTGATAATCAATTCATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTGAGCTTCCACCTCGCTaGAGACGCGGCTTAGCCGGT +
Preference number: 4 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPELPPR*RRGLAG
Trigger: ACCGGCTAAGCCGCGTCTCCAGCGAGGTGGAAGCTC...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp AGGGCTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGACAGGAGCCAGGGCAGTaGGAGCCCTACAGTGATGTC +
Preference number: 4 (lower is better)
Translates to: RAVCQLPLLKRSRSPEPRQEPGQ*EPYSDV
Trigger: GACATCACTGTAGGGCTCCCACTGCCCTGGCTCCTG...TCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp TGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGGGCTGCCTTGGAAGTATaGGGGAGGGTAGGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: CQLPLLKRSRSPEPRVWRAALEV*GRVGGD
Trigger: GTCACCGCCTACCCTCCCCCATACTTCCAAGGCAGC...CCTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp CCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTGAGCTTCCACCTCGCTaGAGACGCGGCTTAGCCGGT +
Preference number: 4 (lower is better)
Translates to: PRAQSVEGPFMLLVQDMAELPPR*RRGLAG
Trigger: ACCGGCTAAGCCGCGTCTCCAGCGAGGTGGAAGCTC...AGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp TCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGGGGGAGGGTAGGCGGTaGCAGCAAGCAAGACCTGCT +
Preference number: 4 (lower is better)
Translates to: SISPQIHQGGTLGTQGCVGEGRR*QQARPA
Trigger: AGCAGGTCTTGCTTGCTGTCACCGCCTACCCTCCCC...CACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGGGCAGATGGCTTTGCTTaGGCTTCTGGTGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: CQLPLLKRSRSPEPRVWRADGFA*ASGAVT
Trigger: GGTGACAGCACCAGAAGCCCAAGCAAAGCCATCTGC...CCTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp TCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCAGGAGCCAGGGCAGTaGGAGCCCTACAGTGATGTC +
Preference number: 4 (lower is better)
Translates to: SLLKFTKEGHLAPRAVCQQEPGQ*EPYSDV
Trigger: GACATCACTGTAGGGCTCCCACTGCCCTGGCTCCTG...CTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp GGGCTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGAGATGCTATTCCTCATaGGACTGTTGTGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GLCASCLFSRGQGAQSPERCYSS*DCCGGR
Trigger: CCTCCCTCCACAACAGTCTCATGAGGAATAGCATCT...CTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTGCTGGAATCTGTGAATaGCGGTGTACAGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPAGICE*RCTGAR
Trigger: CCTGGCTCCTGTACACCGTCATTCACAGATTCCAGC...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp CTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTAAAGGCCATTGCTGCTaGCAGCCACTGGCTGGAATC +
Preference number: 4 (lower is better)
Translates to: LCASCLFSRGQGAQSPECKGHCC*QPLAGI
Trigger: GATTCCAGCCAGTGGCTGTCAGCAGCAATGGCCTTT...ACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp TCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCATCCTTGTCCCTGGCTaGAGATGGCTTTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SSNSPRRDTWHPGLCASCILVPG*RWLCLG
Trigger: GCCCAAGCAAAGCCATCTGCAGCCAGGGACAAGGAT...GCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp GTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGTTGGCAGCCCCATTCTaGCTCTCGTTCTCATCCACA +
Preference number: 4 (lower is better)
Translates to: VPAASSQEVKEPRAQSVELAAPF*LSFSST
Trigger: TGTGGATGAGAACGAGAGGCAGAATGGGGCTGCCAA...CTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp GTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGAGCGGTCTGGGCTTCTaGACCTTCAATGTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: VPAASSQEVKEPRAQSVESGLGF*TFNVVG
Trigger: TCCCACAACATTGAAGGTGCAGAAGCCCAGACCGCT...CTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTGGGCTGTGTGCCAGCTaGCTCTTCTCAAGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPGLCAS*LFSRGQ
Trigger: TTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCC...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp GGGCTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGCAAGCATCGCTAAGTTaGCTCAACCCAAGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GLCASCLFSRGQGAQSPEQASLS*LNPSSA
Trigger: AGCACTGCTTGGGTTGAGGCAACTTAGCGATGCTTG...CTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp GCCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCCCAGTGAGGGAGCAGTaGTGTTGTAGGTCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: AQSPECGGTIHAAGARYGPVREQ*CCRSGS
Trigger: TGAGCCTGACCTACAACAGCACTGCTCCCTCACTGG...GCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp CCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTCTCCGGGTGATTACATaGCACAACCTGCGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PRAQSVEGPFMLLVQDMALRVIT*HNLRRS
Trigger: GGACCTGCGCAGGTTGTGGCATGTAATCACCCGGAG...AGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTCGCAGATGGCTTTGCTTaGGCTTCTGGTGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: SNSPRRDTWHPGLCASCLADGFA*ASGAVT
Trigger: GGTGACAGCACCAGAAGCCCAAGCAAAGCCATCTGC...GAGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp TGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGCCTCCCTTCGGCGAGTaGGTCAAGGGTGTGTATCAT +
Preference number: 4 (lower is better)
Translates to: CVPAASSQEVKEPRAQSVPPFGE*VKGVYH
Trigger: ATGATACACACCCTTGACCCACTCGCCGAAGGGAGG...CACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286344.3
CDS-3UTR CCA 90 bp CCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTACCAAAGCCTGGTCCTaGTACCACTCGACCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PRAQSVEGPFMLLVQDMATKAWS*YHSTWH
Trigger: GTGCCAGGTCGAGTGGTACCAGGACCAGGCTTTGGT...AGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGGAGCAAGGGCAGGCTGTaGAATCACTTGTGTCCCATC +
Preference number: 4 (lower is better)
Translates to: CQLPLLKRSRSPEPRVWRSKGRL*NHLCPI
Trigger: GATGGGACACAAGTGATTCCACAGCCTGCCCTTGCT...CCTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp CATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCGGTGCAGAGGGCAGCTaGAGTTGGCATGGGCATTCT +
Preference number: 4 (lower is better)
Translates to: HLSSNSPRRDTWHPGLCAGAEGS*SWHGHS
Trigger: AGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACC...GGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTGGTTCTGAGCAAGGCTaGTGCCCCATGTGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPGSEQG*CPMCEE
Trigger: TTCCTCACACATGGGGCACCAGCCTTGCTCAGAACC...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGCACCAGCATCTATGCTaGGATCTCCCCCGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: CVPAASSQEVKEPRAQSVHQHLC*DLPRKR
Trigger: CCTCTTACGGGGGAGATCCCAGCATAGATGCTGGTG...CACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp AGGGCTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGACTGGTGCTGTCACCTTaGCGACCTTATTGCGGTTTA +
Preference number: 4 (lower is better)
Translates to: RAVCQLPLLKRSRSPEPRLVLSP*RPYCGL
Trigger: TAAACCGCAATAAGGTCGTCAAGGTGACAGCACCAG...TCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp GCCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTGAAGCCTTTTCTCTaGACCTCCCTTCGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: AQSPECGGTIHAAGARYGLKPFL*TSLRRV
Trigger: CACTCGCCGAAGGGAGGTTCAGAGAAAAGGCTTCAA...GCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286344.3
CDS-3UTR TCA 90 bp TCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCACTGGCTGGAATCTGTaGATGACGGTGTACAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSNSPRRDTWHPGLCASCTGWNL*MTVYRS
Trigger: GCTCCTGTACACCGTCATTCACAGATTCCAGCCAGT...GCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp ATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGGTGGAAGCAGCCTGTaGAGTGAATGGGCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: ISPQIHQGGTLGTQGCVPGGSSL*SEWAQC
Trigger: ACACTGGGCCCATTCACTTCACAGGCTGCTTCCACC...TGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTCTTGTGTCCCATCCAGTaGGGGAGCAGTGCTGTTGTA +
Preference number: 4 (lower is better)
Translates to: SNSPRRDTWHPGLCASCLLCPIQ*GSSAVV
Trigger: TACAACAGCACTGCTCCCTCACTGGATGGGACACAA...GAGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp GGGCTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTTTGAGGCTACACTaGGCTATGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: GLCASCLFSRGQGAQSPECLRLH*AMIAPL
Trigger: CAGTGGTGCAATCATAGCTCAGTGTAGCCTCAAACA...CTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp CTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTCTGATGGTAACCCTGTaGTACCCTAGGGCCACTTAC +
Preference number: 4 (lower is better)
Translates to: LCASCLFSRGQGAQSPECLMVTL*YPRATY
Trigger: GTAAGTGGCCCTAGGGTAGCACAGGGTTACCATCAG...ACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTAGCGGTCTGGGCTTCTaGACCTTCAATGTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPSGLGF*TFNVVG
Trigger: TCCCACAACATTGAAGGTGCAGAAGCCCAGACCGCT...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTTCACACCAGCATCTATaGTGGGATCTCCCCCGTAAG +
Preference number: 4 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPSHQHL*WDLPRK
Trigger: CTTACGGGGGAGATCCCAGCATAGATGCTGGTGTGA...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp CCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTATTGTCTCTCCAACCTaGTGCGCCCACCAGACCATC +
Preference number: 4 (lower is better)
Translates to: PRAQSVEGPFMLLVQDMAIVSPT*CAHQTI
Trigger: GATGGTCTGGTGGGCGCACCAGGTTGGAGAGACAAT...AGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp TCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCGCTGCTGACAGCCACTaGCTGGAATCTGTGAATGAC +
Preference number: 4 (lower is better)
Translates to: SSNSPRRDTWHPGLCASCAADSH*LESVND
Trigger: GTCATTCACAGATTCCAGCCAGTGGCTGTCAGCAGC...GCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp GGGCTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGAAGTTCTTCGGCGAGTaGGTCAAGGGTGTGTATCAT +
Preference number: 4 (lower is better)
Translates to: GLCASCLFSRGQGAQSPEKFFGE*VKGVYH
Trigger: ATGATACACACCCTTGACCCACTCGCCGAAGAACTT...CTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTCTGGTACCACTCGACCTaGCACTCAGAAACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SNSPRRDTWHPGLCASCLWYHST*HSETFL
Trigger: CAGGAAGGTTTCTGAGTGCCAGGTCGAGTGGTACCA...GAGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTCCCCAATCTGCCGAGTTaGAGAGACTTGAAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SNSPRRDTWHPGLCASCLPNLPS*RDLKAS
Trigger: GCTGGCTTTCAAGTCTCTCCAACTCGGCAGATTGGG...GAGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTCAAAGTGGTCTGGGGGTaGGCTCCCTTTGTAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SNSPRRDTWHPGLCASCLKVVWG*APFVAH
Trigger: ATGAGCTACAAAGGGAGCCCACCCCCAGACCACTTT...GAGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CAA 72 bp GGGAATTGTCAGTTTGAGCCAAGCTGCTCTGCTGCCTaGGAAGTATGGGGGAGGGTAGGCGGTGACAGCAAG +
Preference number: 4 (lower is better)
Translates to: GNCQFEPSCSAA*EVWGRVGGDSK
Trigger: CTTGCTGTCACCGCCTACCCTCCCCCATACTTCCAAGGCAGCAGAGCAGCTTGGCTCAAACTGACAATTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGGGTGGGAGCCCTACAGTaGTGTCAAAAATGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: CQLPLLKRSRSPEPRVWRVGALQ*CQKCCF
Trigger: GAAGCAACATTTTTGACATCACTGTAGGGCTCCCAC...CCTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp GCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCGAGTTGGAGAGACTTaGAAGCCAGCCTCCGACTGG +
Preference number: 4 (lower is better)
Translates to: AQCESISPQIHQGGTLGTRVGET*KPASDW
Trigger: CCAGTCGGAGGCTGGCTTTCAAGTCTCTCCAACTCG...GGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTGCGCAATTCAGTAACTaGGGCTCCCTCTTCCGAATA +
Preference number: 4 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPAQFSN*GSLFRI
Trigger: TATTCGGAAGAGGGAGCCTCAGTTACTGAATTGCGC...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp TCTGGTCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATATCCTTGTCCCTGGCTaGAGATGGCTTTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SGQVQRAAGVGMGILRCNILVPG*RWLCLG
Trigger: GCCCAAGCAAAGCCATCTGCAGCCAGGGACAAGGAT...ATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp TCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGTTGGCAGCCCCATTCTaGCTCTCGTTCTCATCCACA +
Preference number: 4 (lower is better)
Translates to: SLLKFTKEGHLAPRAVCQLAAPF*LSFSST
Trigger: TGTGGATGAGAACGAGAGGCAGAATGGGGCTGCCAA...CTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp GGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCAGTCTCTCCAACCTGGTaGGCCCACCAGACCATCAAG +
Preference number: 4 (lower is better)
Translates to: GPSVNPSLLKFTKEGHLAVSPTW*AHQTIK
Trigger: CTTGATGGTCTGGTGGGCGCACCAGGTTGGAGAGAC...TGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp GCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCGTCTCTCCAACCTGGTaGGCCCACCAGACCATCAAG +
Preference number: 4 (lower is better)
Translates to: AQCESISPQIHQGGTLGTVSPTW*AHQTIK
Trigger: CTTGATGGTCTGGTGGGCGCACCAGGTTGGAGAGAC...GGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp TCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGAATCAGCGAGGCAGCTaGGTTTTGCTGAAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SLLKFTKEGHLAPRAVCQNQRGS*VLLKGL
Trigger: GAGCCCTTTCAGCAAAACGCAGCTGCCTCGCTGATT...CTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp TCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCGGGAGGAAAGCACACTaGCATGTTCTGAAATGCCTG +
Preference number: 4 (lower is better)
Translates to: SSNSPRRDTWHPGLCASCGRKAH*HVLKCL
Trigger: CAGGCATTTCAGAACATGGCAGTGTGCTTTCCTCCC...GCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp TGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGGTTGCCTCTCGAATGCTaGCTGACTTGTGGATTTGCT +
Preference number: 4 (lower is better)
Translates to: CQLPLLKRSRSPEPRVWRLPLEC*LTCGFA
Trigger: AGCAAATCCACAAGTCAGGCAGCATTCGAGAGGCAA...CCTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTCGTTGCAGATCCATCCTaGGTCTTCTGGTGGATATGG +
Preference number: 4 (lower is better)
Translates to: SNSPRRDTWHPGLCASCLVADPS*VFWWIW
Trigger: CCATATCCACCAGAAGACCCAGGATGGATCTGCAAC...GAGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTGTTCATCCTTGTCCCTaGCTGCAGATGGCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPVHPCP*LQMALL
Trigger: AAGCAAAGCCATCTGCAGCCAGGGACAAGGATGAAC...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp CATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCCTCATGAGACTGTTGTaGAGGGAGGCAGAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: HLSSNSPRRDTWHPGLCALMRLL*REAELP
Trigger: TGGAAGCTCTGCCTCCCTCCACAACAGTCTCATGAG...GGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp AGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCAAGGCTGAGAGGCTaGTCCTCCTCCTCATCAGCG +
Preference number: 4 (lower is better)
Translates to: SVNPSLLKFTKEGHLAPRARLRG*SSSSSA
Trigger: CGCTGATGAGGAGGAGGACCAGCCTCTCAGCCTTGC...CCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp TGGTTGTTAATCATTGAGCTGGGTCACACCAGCATCTATGCTGGGATCTCCCCCGCAAGGCTGAGAGGCTaGTCCTCCTCCTCATCAGCG +
Preference number: 4 (lower is better)
Translates to: WLLIIELGHTSIYAGISPARLRG*SSSSSA
Trigger: CGCTGATGAGGAGGAGGACCAGCCTCTCAGCCTTGC...GGGGGAGATCCCAGCATAGATGCTGGTGTGACCCAGCTCAATGATTAACAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGTTTGTTAAAGTGGTCTaGGGGTGGGCTCCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: VPAASSQEVKEPRAQSVEFVKVV*GWAPFV
Trigger: TACAAAGGGAGCCCACCCCCAGACCACTTTAACAAA...CTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp AGGGCTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAATTTCTCTAGGGAAGTaGTGGTGGTGCTTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: RAVCQLPLLKRSRSPEPRISLGK*WWCFVA
Trigger: TGCAACAAAGCACCACCATCACTTCCCTAGAGAAAT...TCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp TCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCTCTGCAGCCAGACAGTaGCTCATCCAAACACCATTT +
Preference number: 4 (lower is better)
Translates to: SSNSPRRDTWHPGLCASCSAARQ*LIQTPF
Trigger: AAATGGTGTTTGGATGAGTCACTGTCTGGCTGCAGA...GCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp TGGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCGCTGGAATCTGTGAATaGCGGTGTACAGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: WAQCESISPQIHQGGTLGAGICE*RCTGAR
Trigger: CCTGGCTCCTGTACACCGTCATTCACAGATTCCAGC...GCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp TGGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCAAAGGCCATTGCTGCTaGCAGCCACTGGCTGGAATC +
Preference number: 4 (lower is better)
Translates to: WAQCESISPQIHQGGTLGKGHCC*QPLAGI
Trigger: GATTCCAGCCAGTGGCTGTCAGCAGCAATGGCCTTT...GCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp GTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGTTGAAGCCTTTTCTCTaGACCTCCCTTCTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: VPAASSQEVKEPRAQSVELKPFL*TSLLQS
Trigger: TGACTGAAGAAGGGAGGTTCAGAGAAAAGGCTTCAA...CTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTTGTACTTGTCAGTGGTaGATAGGGAGAAGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPCTCQW*IGRSPV
Trigger: TACAGGGCTTCTCCCTATTCACCACTGACAAGTACA...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp GCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCTTCCTGGGGTGCACTaGGTGTGCAAATGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: AQCESISPQIHQGGTLGTLPGVH*VCKCLS
Trigger: GGAAAGGCATTTGCACACTCAGTGCACCCCAGGAAG...GGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGGACTGGCAGCCATCTTaGTTTCTTGTTTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLLKFTKEGHLAPRAVCQDWQPS*FLVFPG
Trigger: CCCTGGGAAAACAAGAAATCAAGATGGCTGCCAGTC...CTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp GCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCGCATTGTCCCACATCTaGAGACCCCAATCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: AQCESISPQIHQGGTLGTALSHI*RPQSAE
Trigger: CTCGGCAGATTGGGGTCTTCAGATGTGGGACAATGC...GGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATTTAGGTGCTCTGTCACTGCCTaGCTCAGTTTAGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SGAEGSWSWHGHSQMQFRCSVTA*LSLGPG
Trigger: CCCAGGACCTAAACTGAGTCAGGCAGTGACAGAGCA...CCTAAATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp CCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTATGGCCCTTGTCAGGTaGCACCTGTTAGAAGCCTTA +
Preference number: 4 (lower is better)
Translates to: PRAQSVEGPFMLLVQDMAMALVR*HLLEAL
Trigger: TAAGGCTTCTAACAGGTGTCACCTGACAAGGGCCAT...AGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TGGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCGCAGCTGCGTTTTGCTaGAAGGGCTCCAAACCACCT +
Preference number: 4 (lower is better)
Translates to: WAQCESISPQIHQGGTLGAAAFC*KGSKPP
Trigger: AGGTGGTTTGGAGCCCTTTCAGCAAAACGCAGCTGC...GCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp ATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAACTACATGCTCCGGGTaGTTACATGCCACAACCTGC +
Preference number: 4 (lower is better)
Translates to: ISPQIHQGGTLGTQGCVPTTCSG*LHATTC
Trigger: GCAGGTTGTGGCATGTAATCACCCGGAGCATGTAGT...TGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TGGTTGTTAATCATTGAGCTGGGTCACACCAGCATCTATGCTGGGATCTCCCCCGAGTTTGGGTGGTTCTaGGCAAGGCTGGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: WLLIIELGHTSIYAGISPEFGWF*ARLVPH
Trigger: ATGGGGCACCAGCCTTGCTCAGAACCACCCAAACTC...GGGGGAGATCCCAGCATAGATGCTGGTGTGACCCAGCTCAATGATTAACAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp TGGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCGGCTGCAGATGGCTTTaGTTGGGCTTCTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: WAQCESISPQIHQGGTLGGCRWL*LGFWCC
Trigger: ACAGCACCAGAAGCCCAAGCAAAGCCATCTGCAGCC...GCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp GAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGGCTGCAGATGGCTTTaGTTGGGCTTCTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: ESISPQIHQGGTLGTQGCGCRWL*LGFWCC
Trigger: ACAGCACCAGAAGCCCAAGCAAAGCCATCTGCAGCC...ACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp TGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGGCATTCATGCTGCTGGTaGAAGATATGGCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: CQLPLLKRSRSPEPRVWRHSCCW*KIWLFL
Trigger: CAGGAAAAGCCATATCTTGCACCAGCAGCATGAATG...CCTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp CCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCGGGCTGTGTGCCAGCTaGCTCTTCTCAAGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: PSVNPSLLKFTKEGHLAPGLCAS*LFSRGQ
Trigger: TTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCC...GGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp TCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCTCATTGCTCTGTCACTaGCTGACTCAGTTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: SSNSPRRDTWHPGLCASCSLLCH*LTQFRS
Trigger: GGACCTAAACTGAGTCAGGCAGTGACAGAGCAATGA...GCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp CCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTGGCTTTAGGACATTCTaGTGCATCTGCCGAGGGTAT +
Preference number: 4 (lower is better)
Translates to: PRAQSVEGPFMLLVQDMAGFRTF*CICRGY
Trigger: ATACCCTCGGCAGATGCAGCAGAATGTCCTAAAGCC...AGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGTCCTCATCAGCGGTCTaGGCTTCTGCACCTTCAATG +
Preference number: 4 (lower is better)
Translates to: SISPQIHQGGTLGTQGCVSSSAV*ASAPSM
Trigger: CATTGAAGGTGCAGAAGCCCAGACCGCTGATGAGGA...CACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp ATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTATTGTCTCTCCAACCTaGTGCGCCCACCAGACCATC +
Preference number: 4 (lower is better)
Translates to: IHLSSNSPRRDTWHPGLCIVSPT*CAHQTI
Trigger: GATGGTCTGGTGGGCGCACCAGGTTGGAGAGACAAT...ACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp GTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGGGGTTTGGGTTAACTTaGAGGGAGGCTTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: VPAASSQEVKEPRAQSVEGFGLT*REAFLD
Trigger: ATCAAGAAAAGCCTCCCTCCAAGTTAACCCAAACCC...CTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GCCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTCACCAGAGCTTCATaGTCATGCTGCACCCAGTAT +
Preference number: 4 (lower is better)
Translates to: AQSPECGGTIHAAGARYGFTRAS*SCCTQY
Trigger: ATACTGGGTGCAGCATGACCATGAAGCTCTGGTGAA...GCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTCCTTTTGGTGAACCCTaGCCCATGAGATCAATCAGT +
Preference number: 4 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPPFGEP*PMRSIS
Trigger: ACTGATTGATCTCATGGGCCAGGGTTCACCAAAAGG...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp GCCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCATTTCTCTAGGGAAGTaGTGGTGGTGCTTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: AQSPECGGTIHAAGARYGISLGK*WWCFVA
Trigger: TGCAACAAAGCACCACCATCACTTCCCTAGAGAAAT...GCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp AGGGCTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGATCTTGTGGAGAATTaGAGCCTTTTCTCTGAACCT +
Preference number: 4 (lower is better)
Translates to: RAVCQLPLLKRSRSPEPRDLVEN*SLFSEP
Trigger: AGGTTCAGAGAAAAGGCTTCAATTCTCCACAAGATC...TCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp CTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTTCGTTCTCATCCACATaGCATTTCTTCTTGGCGATC +
Preference number: 4 (lower is better)
Translates to: LCASCLFSRGQGAQSPECSFSST*HFFLAI
Trigger: GATCGCCAAGAAGAAATGTCATGTGGATGAGAACGA...ACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp GGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCACAACACTTCCTGTaGAGTGGAGCTCCGAGACAA +
Preference number: 4 (lower is better)
Translates to: GPSVNPSLLKFTKEGHLAPQHFL*SGAPRQ
Trigger: TTGTCTCGGAGCTCCACTTCACAGGAAGTGTTGTGG...TGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TGTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTGGTGGAGGTGGGCAGATGGGAATTGTCAGTTTaGGCCAAGCTGCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CPKYPEFLGQGTLVEVGRWELSV*AKLLCC
Trigger: GCAGCAGAGCAGCTTGGCTCAAACTGACAATTCCCA...TCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TGTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTGGTGGAGGTGGGCAGACTATGGGGCAAAGAGTaGAGAGTGCCCAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: CPKYPEFLGQGTLVEVGRLWGKE*RVPRCS
Trigger: ACTGCATCTGGGCACTCTTCACTCTTTGCCCCATAG...TCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp GGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCATTCCCATCCTTTTGGTaGACCCTGGCCCATGAGATC +
Preference number: 4 (lower is better)
Translates to: GPSVNPSLLKFTKEGHLAFPSFW*TLAHEI
Trigger: GATCTCATGGGCCAGGGTTCACCAAAAGGATGGGAA...TGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp GCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCCTCACTGGCCTCTCCTGTaGTCTGTGTATCTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: AQSVEGPFMLLVQDMAFPHWPLL*SVYLSQ
Trigger: CTGAGACAGATACACAGAGCACAGGAGAGGCCAGTG...AGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp TCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTACAATTGTGCCTATaGCAACGTTGCTGTGAGCGA +
Preference number: 4 (lower is better)
Translates to: SLLKFTKEGHLAPRAVCQLQLCL*QRCCER
Trigger: TCGCTCACAGCAACGTTGGCATAGGCACAATTGTAG...CTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTCTGAACCTACAATTGTaGCTATGCCAACGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPLNLQL*LCQRCC
Trigger: ACAGCAACGTTGGCATAGGCACAATTGTAGGTTCAG...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp CTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTCTGAACCTACAATTGTaGCTATGCCAACGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LCASCLFSRGQGAQSPECLNLQL*LCQRCC
Trigger: ACAGCAACGTTGGCATAGGCACAATTGTAGGTTCAG...ACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp GCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCCTTGCTTGGGCTTCTGGTaGTGTCACCTTGACGACCTT +
Preference number: 4 (lower is better)
Translates to: AQSVEGPFMLLVQDMAFPCLGFW*CHLDDL
Trigger: AAGGTCGTCAAGGTGACAGCACCAGAAGCCCAAGCA...AGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTCCTTTCCTCTTATTCTaGTGTGAGTTCTGCATCCTG +
Preference number: 4 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPPFLLF*CEFCIL
Trigger: CAGGATGCAGAACTCACAGCAGAATAAGAGGAAAGG...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp TGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGCCTCGGGTTTGAAGTaGTTTTTACTTCTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: CVPAASSQEVKEPRAQSVASGLK*FLLLGE
Trigger: TTCACCCAGAAGTAAAAAGCACTTCAAACCCGAGGC...CACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp CATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAAAGGGCACCATAGCTaGTTTGATCAGCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: HLSSNSPRRDTWHPGLCAKGHHS*FDQPSL
Trigger: CAGTGAAGGCTGATCAAAGCAGCTATGGTGCCCTTT...GGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp ATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGTTGCAGATCCATCCTaGGTCTTCTGGTGGATATGG +
Preference number: 4 (lower is better)
Translates to: ISPQIHQGGTLGTQGCVPVADPS*VFWWIW
Trigger: CCATATCCACCAGAAGACCCAGGATGGATCTGCAAC...TGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp GAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTCTTTGCTTGGGCTTCTaGTGCTGTCACCTTGACGAC +
Preference number: 4 (lower is better)
Translates to: ESISPQIHQGGTLGTQGCLCLGF*CCHLDD
Trigger: GTCGTCAAGGTGACAGCACCAGAAGCCCAAGCAAAG...ACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp TGGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCCTCATGAGACTGTTGTaGAGGGAGGCAGAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: WAQCESISPQIHQGGTLGLMRLL*REAELP
Trigger: TGGAAGCTCTGCCTCCCTCCACAACAGTCTCATGAG...GCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp CTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTTGCTGGTGCAAGATATaGCTTTTCCTGCTAGATGGA +
Preference number: 4 (lower is better)
Translates to: LCASCLFSRGQGAQSPECCWCKI*LFLLDG
Trigger: TCCATCTAGCAGGAAAAGCCATATCTTGCACCAGCA...ACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp TCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCGACCATTCATGCTGCTaGTGCAAGATATGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SSNSPRRDTWHPGLCASCDHSCC*CKIWLF
Trigger: GAAAAGCCATATCTTGCACCAGCAGCATGAATGGTC...GCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp CTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGACCATTCATGCTGCTaGTGCAAGATATGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LCASCLFSRGQGAQSPECDHSCC*CKIWLF
Trigger: GAAAAGCCATATCTTGCACCAGCAGCATGAATGGTC...ACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp ATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTTTGGTCAGGGTACTCTaGTGGAGGTGGGCAGATAGT +
Preference number: 4 (lower is better)
Translates to: IHLSSNSPRRDTWHPGLCLVRVL*WRWADS
Trigger: ACTATCTGCCCACCTCCACCAGAGTACCCTGACCAA...ACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp ATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAACTCAGAAACCTTCCTaGGGTGCACTGAGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: ISPQIHQGGTLGTQGCVPTQKPS*GALSVQ
Trigger: TTGCACACTCAGTGCACCCCAGGAAGGTTTCTGAGT...TGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGGAGTGCTTTTTACTTCTaGGTGAAGAGGAATGATGGG +
Preference number: 4 (lower is better)
Translates to: CQLPLLKRSRSPEPRVWRSAFYF*VKRNDG
Trigger: CCCATCATTCCTCTTCACCCAGAAGTAAAAAGCACT...CCTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TGGTTGTTAATCATTGAGCTGGGTCACACCAGCATCTATGCTGGGATCTCCCCCGGCCTCTGTGGAGTTTaGGTGGTTCTGAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: WLLIIELGHTSIYAGISPGLCGV*VVLSKA
Trigger: AGCCTTGCTCAGAACCACCCAAACTCCACAGAGGCC...GGGGGAGATCCCAGCATAGATGCTGGTGTGACCCAGCTCAATGATTAACAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACTCAAGAGGCTGAAGTaGGAGGATCGCTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GPSVNPSLLKFTKEGHLALKRLK*EDRLSP
Trigger: TGGACTCAAGCGATCCTCCCACTTCAGCCTCTTGAG...TGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp GAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTTGGCTACCAGACCCATaGAAAGGCCTAAGACTCGAA +
Preference number: 4 (lower is better)
Translates to: ESISPQIHQGGTLGTQGCWLPDP*KGLRLE
Trigger: TTCGAGTCTTAGGCCTTTTCATGGGTCTGGTAGCCA...ACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp AGGGCTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGACAATGGCTAAGGCTATaGACATGTAGATCATTCCAA +
Preference number: 4 (lower is better)
Translates to: RAVCQLPLLKRSRSPEPRQWLRL*TCRSFQ
Trigger: TTGGAATGATCTACATGTTCATAGCCTTAGCCATTG...TCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp TCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATTTAGGCTGGTGCTGTCACCTTaGCGACCTTATTGCGGTTTA +
Preference number: 4 (lower is better)
Translates to: SGAEGSWSWHGHSQMQFRLVLSP*RPYCGL
Trigger: TAAACCGCAATAAGGTCGTCAAGGTGACAGCACCAG...CCTAAATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp ATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTAGATGCTATTCCTCATaGGACTGTTGTGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: IHLSSNSPRRDTWHPGLCRCYSS*DCCGGR
Trigger: CCTCCCTCCACAACAGTCTCATGAGGAATAGCATCT...ACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp TCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCAAGGGTGTGTATCATaGGTTGGAAGATGCTATTCC +
Preference number: 4 (lower is better)
Translates to: SLLKFTKEGHLAPRAVCQQGCVS*VGRCYS
Trigger: GGAATAGCATCTTCCAACTCATGATACACACCCTTG...CTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp CTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTATTTTGTACAGGTTCTaGAGCATCACTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: LCASCLFSRGQGAQSPECILYRF*SITGWC
Trigger: ACACCATCCAGTGATGCTTCAGAACCTGTACAAAAT...ACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp AGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGACTGGCTGGAATCTGTaGATGACGGTGTACAGGAGC +
Preference number: 4 (lower is better)
Translates to: SVNPSLLKFTKEGHLAPRTGWNL*MTVYRS
Trigger: GCTCCTGTACACCGTCATTCACAGATTCCAGCCAGT...CCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp GCCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTCCCAGATAAGGTCTTaGTGGAAGAAGAGACATAGA +
Preference number: 4 (lower is better)
Translates to: AQSPECGGTIHAAGARYGSQIRS*WKKRHR
Trigger: TCTATGTCTCTTCTTCCATCAAGACCTTATCTGGGA...GCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp CTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTCATAGCAGGCGTCAATaGCAGAATAGATTGGAGATA +
Preference number: 4 (lower is better)
Translates to: LCASCLFSRGQGAQSPECHSRRQ*QNRLEI
Trigger: TATCTCCAATCTATTCTGTCATTGACGCCTGCTATG...ACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TGTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTGGTGGAGGTGGGCAGACTCTGTGGGGTGAGCTaGGGTTTTCTGGAAGGAATA +
Preference number: 4 (lower is better)
Translates to: CPKYPEFLGQGTLVEVGRLCGVS*GFLEGI
Trigger: TATTCCTTCCAGAAAACCTCAGCTCACCCCACAGAG...TCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TGGTTGTTAATCATTGAGCTGGGTCACACCAGCATCTATGCTGGGATCTCCCCCAGGGGGCCTCGGGTTTaGAGTGCTTTTTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: WLLIIELGHTSIYAGISPRGPRV*SAFYFW
Trigger: CCAGAAGTAAAAAGCACTTCAAACCCGAGGCCCCCT...GGGGGAGATCCCAGCATAGATGCTGGTGTGACCCAGCTCAATGATTAACAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGAGCAAGAGTGAGCACTaGCTTCTATGCATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: SLLKFTKEGHLAPRAVCQSKSEH*LLCMLS
Trigger: TGAAAGCATGCATAGAAGTCAGTGCTCACTCTTGCT...CTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp ATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGAGTTGAGCTGGCTGTaGGTAGTTCCCTTATTGCTT +
Preference number: 4 (lower is better)
Translates to: ISPQIHQGGTLGTQGCVPELSWL*VVPLLL
Trigger: AAGCAATAAGGGAACTACTCACAGCCAGCTCAACTC...TGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp CCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTGTCCAAAGCTCCTGGTaGAAAAGGAATATTGCCATG +
Preference number: 4 (lower is better)
Translates to: PRAQSVEGPFMLLVQDMAVQSSW*KRNIAM
Trigger: CATGGCAATATTCCTTTTTCACCAGGAGCTTTGGAC...AGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGGTGTCTCCCCAATTTTaGGTTCTTTGTGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SLLKFTKEGHLAPRAVCQVSPQF*VLCESE
Trigger: CTCAGACTCACAAAGAACTCAAAATTGGGGAGACAC...CTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp AGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGTGCTTGGGCTTCTGGTaGTGTCACCTTGACGACCTT +
Preference number: 4 (lower is better)
Translates to: SVNPSLLKFTKEGHLAPRCLGFW*CHLDDL
Trigger: AAGGTCGTCAAGGTGACAGCACCAGAAGCCCAAGCA...CCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp ATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAATCAGAAACGTGACTTaGTTGCGGGTTTCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: ISPQIHQGGTLGTQGCVPIRNVT*LRVSEG
Trigger: GCCTTCTGAAACCCGCAAGCAAGTCACGTTTCTGAT...TGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp TCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTCCAAGTAAGAGAATACTaGAATCCAGGTAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: SNSPRRDTWHPGLCASCLQVREY*NPGNGA
Trigger: GGCTCCATTACCTGGATTGCAGTATTCTCTTACTTG...GAGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp GCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCGGCATTTCCTGTTATTaGCATGCTCTGTGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: AQCESISPQIHQGGTLGTGISCY*HALWGE
Trigger: CTCACCCCACAGAGCATGGCAATAACAGGAAATGCC...GGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp GTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGGTATATACACAGGCATaGAGGAAACGAGTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: VPAASSQEVKEPRAQSVEVYTQA*RKRVRD
Trigger: ATCTCTAACTCGTTTCCTGCATGCCTGTGTATATAC...CTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp TCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGTGTGTGAGGAAGGCATaGAAAATGCCAGTGTGTACA +
Preference number: 4 (lower is better)
Translates to: SLLKFTKEGHLAPRAVCQCVRKA*KMPVCT
Trigger: TGTACACACTGGCATTTTGCATGCCTTCCTCACACA...CTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp GCCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCGCAAAGAGTGAAGAGTaGCCAGATGCAGTTACTTTT +
Preference number: 4 (lower is better)
Translates to: AQSPECGGTIHAAGARYGAKSEE*PDAVTF
Trigger: AAAAGTAACTGCATCTGGGCACTCTTCACTCTTTGC...GCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGTTCTTGGCGATCTTGTaGAGAATTGAAGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VPAASSQEVKEPRAQSVEFLAIL*RIEAFS
Trigger: AGAAAAGGCTTCAATTCTCCACAAGATCGCCAAGAA...CTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp TGGTTGTTAATCATTGAGCTGGGTCACACCAGCATCTATGCTGGGATCTCCCCCGCTGCTGACAGCCACTaGCTGGAATCTGTGAATGAC +
Preference number: 4 (lower is better)
Translates to: WLLIIELGHTSIYAGISPAADSH*LESVND
Trigger: GTCATTCACAGATTCCAGCCAGTGGCTGTCAGCAGC...GGGGGAGATCCCAGCATAGATGCTGGTGTGACCCAGCTCAATGATTAACAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TGTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTGGTGGAGGTGGGCAGACCAAGCCACCCAGCCTaGGTTTTTACCTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: CPKYPEFLGQGTLVEVGRPSHPA*VFTSFC
Trigger: ACAGAAAGAGGTAAAAACCCAGGCTGGGTGGCTTGG...TCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp CCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTGGTGTTTCAATGTCTTaGAAGGCATTGTCCCACATC +
Preference number: 4 (lower is better)
Translates to: PRAQSVEGPFMLLVQDMAGVSMS*KALSHI
Trigger: GATGTGGGACAATGCCTTCCAAGACATTGAAACACC...AGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp CTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTTGTGGGAACGGGGCTTaGAAATTTTGTCTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: LCASCLFSRGQGAQSPECCGNGA*KFCLLK
Trigger: TTTGAGAAGACAAAATTTCCAAGCCCCGTTCCCACA...ACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTTCAGCATTAGGGATATaGCTGACCGATTTCCTTAAG +
Preference number: 4 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPSALGI*LTDFLK
Trigger: CTTAAGGAAATCGGTCAGCCATATCCCTAATGCTGA...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGACAGTAAATAGAAGGTaGAATAGGGCAGGGTTACTT +
Preference number: 4 (lower is better)
Translates to: VPAASSQEVKEPRAQSVETVNRR*NRAGLL
Trigger: AAGTAACCCTGCCCTATTCCACCTTCTATTTACTGT...CTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp CATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCTTCTGGTGGATATGGTaGTCTTCCAACTTTAGACTC +
Preference number: 4 (lower is better)
Translates to: HLSSNSPRRDTWHPGLCAFWWIW*SSNFRL
Trigger: GAGTCTAAAGTTGGAAGATCACCATATCCACCAGAA...GGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp AAGACCACAACACTTCCTGTGAAGTGGAGCTCCGAGACAAGCAAAGGGCACCATTGGCTACCAGACCCATaGAAAGGCCTAAGACTCGAA +
Preference number: 4 (lower is better)
Translates to: KTTTLPVKWSSETSKGHHWLPDP*KGLRLE
Trigger: TTCGAGTCTTAGGCCTTTTCATGGGTCTGGTAGCCA...ATGGTGCCCTTTGCTTGTCTCGGAGCTCCACTTCACAGGAAGTGTTGTGGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp ATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTATGCCAACGTTGCTGTaGGCGATAAATACCCCTATG +
Preference number: 4 (lower is better)
Translates to: IHLSSNSPRRDTWHPGLCMPTLL*AINTPM
Trigger: CATAGGGGTATTTATCGCTCACAGCAACGTTGGCAT...ACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp GAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGGGAGCCCTACAGTaGTGTCAAAAATGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: ESISPQIHQGGTLGTQGCVGALQ*CQKCCF
Trigger: GAAGCAACATTTTTGACATCACTGTAGGGCTCCCAC...ACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp AAGACCACAACACTTCCTGTGAAGTGGAGCTCCGAGACAAGCAAAGGGCACCATAAGTCCAAGGTAGGCTaGAGGTCACAGCAATGCTAC +
Preference number: 4 (lower is better)
Translates to: KTTTLPVKWSSETSKGHHKSKVG*RSQQCY
Trigger: GTAGCATTGCTGTGACCTTCAGCCTACCTTGGACTT...ATGGTGCCCTTTGCTTGTCTCGGAGCTCCACTTCACAGGAAGTGTTGTGGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp AAGACCACAACACTTCCTGTGAAGTGGAGCTCCGAGACAAGCAAAGGGCACCATCCTCTTATTCTGCTGTaGGTTCTGCATCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: KTTTLPVKWSSETSKGHHPLILL*VLHPVL
Trigger: GAGGACAGGATGCAGAACTCACAGCAGAATAAGAGG...ATGGTGCCCTTTGCTTGTCTCGGAGCTCCACTTCACAGGAAGTGTTGTGGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp CATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCCTTTTTACTTCTGGGTaGAGAGGAATGATGGGCATT +
Preference number: 4 (lower is better)
Translates to: HLSSNSPRRDTWHPGLCALFTSG*RGMMGI
Trigger: AATGCCCATCATTCCTCTTCACCCAGAAGTAAAAAG...GGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp GGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCAGTGAACCCTGGCCCATaGGATCAATCAGTAGCTTTA +
Preference number: 4 (lower is better)
Translates to: GPSVNPSLLKFTKEGHLAVNPGP*DQSVAL
Trigger: TAAAGCTACTGATTGATCTCATGGGCCAGGGTTCAC...TGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp AGGGCTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGACTTATGGATCCATTATaGAGGAATATGCAACCCAAT +
Preference number: 4 (lower is better)
Translates to: RAVCQLPLLKRSRSPEPRLMDPL*RNMQPN
Trigger: ATTGGGTTGCATATTCCTTCATAATGGATCCATAAG...TCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TCTGGTCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATAGTATGTGGATTGCTTaGTGGTGGAAGCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: SGQVQRAAGVGMGILRCNSMWIA*WWKLLL
Trigger: AAGCAACAGCTTCCACCATCAAGCAATCCACATACT...ATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp ATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTCTACAATTGTGCCTATaGCAACGTTGCTGTGAGCGA +
Preference number: 4 (lower is better)
Translates to: IHLSSNSPRRDTWHPGLCLQLCL*QRCCER
Trigger: TCGCTCACAGCAACGTTGGCATAGGCACAATTGTAG...ACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp CATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCCAACATCTGTGCTGGTaGTGTTTGGAAGCTCAATTT +
Preference number: 4 (lower is better)
Translates to: HLSSNSPRRDTWHPGLCAQHLCW*CLEAQF
Trigger: AAATTGAGCTTCCAAACAGCACCAGCACAGATGTTG...GGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp TGTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTGGTGGAGGTGGGCAGAATCAGAAACGTGACTTaGTTGCGGGTTTCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: CPKYPEFLGQGTLVEVGRIRNVT*LRVSEG
Trigger: GCCTTCTGAAACCCGCAAGCAAGTCACGTTTCTGAT...TCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp TCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCTCCCTTTGGTTTGTGTaGATGACTTTCCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SSNSPRRDTWHPGLCASCSLWFV*MTFLFL
Trigger: AAGGAAAAGGAAAGTCATGCACACAAACCAAAGGGA...GCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp AAGACCACAACACTTCCTGTGAAGTGGAGCTCCGAGACAAGCAAAGGGCACCATCAGTTTGAGCCAAGCTaGTCTGCTGCCTTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: KTTTLPVKWSSETSKGHHQFEPS*SAALEV
Trigger: TACTTCCAAGGCAGCAGAGCAGCTTGGCTCAAACTG...ATGGTGCCCTTTGCTTGTCTCGGAGCTCCACTTCACAGGAAGTGTTGTGGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp TCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTATCCCTTAGTCCCTaGATATATCATTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SLLKFTKEGHLAPRAVCQLSLSP*IYHCSV
Trigger: GACAGAGCAATGATATATGCAGGGACTAAGGGATAG...CTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp CCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTAGGACATTCTGCTaGATCTGCCGAGGGTATAAA +
Preference number: 4 (lower is better)
Translates to: PRAQSVEGPFMLLVQDMAFRTFC*ICRGYK
Trigger: TTTATACCCTCGGCAGATGCAGCAGAATGTCCTAAA...AGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp TCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTCACTGACTTCTATGCATaGTTTCAGGAGACAGTAGTT +
Preference number: 4 (lower is better)
Translates to: SNSPRRDTWHPGLCASCLTDFYA*FQETVV
Trigger: AACTACTGTCTCCTGAAAGCATGCATAGAAGTCAGT...GAGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp CATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCTTCCTTAGAAAGAGGTaGCTGTGGAGTATAATCCAG +
Preference number: 4 (lower is better)
Translates to: HLSSNSPRRDTWHPGLCAFLRKR*LWSIIQ
Trigger: CTGGATTATACTCCACAGCCACCTCTTTCTAAGGAA...GGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp GCCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCGTGTGTATCATGAGTTaGAAGATGCTATTCCTCATG +
Preference number: 4 (lower is better)
Translates to: AQSPECGGTIHAAGARYGVCIMS*KMLFLM
Trigger: CATGAGGAATAGCATCTTCCAACTCATGATACACAC...GCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp GGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACTTGTAGGAATGTTTTaGAAGGCTCAACTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GPSVNPSLLKFTKEGHLALVGMF*KAQLRA
Trigger: GGCCCTGAGTTGAGCCTTCCAAAACATTCCTACAAG...TGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TGTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTGGTGGAGGTGGGCAGATATTGCCATGCTCTGTaGGGTGAGCTGAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: CPKYPEFLGQGTLVEVGRYCHAL*GELRFS
Trigger: AGAAAACCTCAGCTCACCCCACAGAGCATGGCAATA...TCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTACACTTCCTGTGAAGTaGAGCTCCGAGACAAGCAAA +
Preference number: 4 (lower is better)
Translates to: ESISPQIHQGGTLGTQGCTLPVK*SSETSK
Trigger: TTTGCTTGTCTCGGAGCTCCACTTCACAGGAAGTGT...ACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCCTAAAAGCTATGTGCAGTaGTGGGGAGTTTGCCAACTC +
Preference number: 4 (lower is better)
Translates to: AQSVEGPFMLLVQDMAFPKSYVQ*WGVCQL
Trigger: GAGTTGGCAAACTCCCCACCACTGCACATAGCTTTT...AGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCCTTTAAGTGGATGGGTTTaGGTTAACTTGGAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: AQSVEGPFMLLVQDMAFPLSGWV*VNLEGG
Trigger: GCCTCCCTCCAAGTTAACCCAAACCCATCCACTTAA...AGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GGGCTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGGTACTGGTTAATAAGTaGAGATCCAATCATTTATCC +
Preference number: 4 (lower is better)
Translates to: GLCASCLFSRGQGAQSPEVLVNK*RSNHLS
Trigger: GGATAAATGATTGGATCTCCACTTATTAACCAGTAC...CTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CAA 72 bp GGAGCTCCGAGACAAGCAAAGGGCACCATAGCTGCTTaGATCAGCCTTCACTGTAAGCTGGGAATAAATGGG +
Preference number: 4 (lower is better)
Translates to: GAPRQAKGTIAA*ISLHCKLGING
Trigger: CCCATTTATTCCCAGCTTACAGTGAAGGCTGATCAAAGCAGCTATGGTGCCCTTTGCTTGTCTCGGAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TGGTTGTTAATCATTGAGCTGGGTCACACCAGCATCTATGCTGGGATCTCCCCCATGCCAACGTTGCTGTaGGCGATAAATACCCCTATG +
Preference number: 4 (lower is better)
Translates to: WLLIIELGHTSIYAGISPMPTLL*AINTPM
Trigger: CATAGGGGTATTTATCGCTCACAGCAACGTTGGCAT...GGGGGAGATCCCAGCATAGATGCTGGTGTGACCCAGCTCAATGATTAACAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp GGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCATCGTTCTCATCCACATaGCATTTCTTCTTGGCGATC +
Preference number: 4 (lower is better)
Translates to: GPSVNPSLLKFTKEGHLASFSST*HFFLAI
Trigger: GATCGCCAAGAAGAAATGTCATGTGGATGAGAACGA...TGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp CCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAAACAATCAGAAACGTaGCTTGCTTGCGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: PSVNPSLLKFTKEGHLAPKQSET*LACGFQ
Trigger: CTGAAACCCGCAAGCAAGTCACGTTTCTGATTGTTT...GGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp GCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCAAACAATCAGAAACGTaGCTTGCTTGCGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: AQCESISPQIHQGGTLGTKQSET*LACGFQ
Trigger: CTGAAACCCGCAAGCAAGTCACGTTTCTGATTGTTT...GGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp CATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAAATGCAACTTCACATaGAAGACCACAACACTTCCT +
Preference number: 4 (lower is better)
Translates to: HLSSNSPRRDTWHPGLCAKCNFT*KTTTLP
Trigger: AGGAAGTGTTGTGGTCTTTCATGTGAAGTTGCATTT...GGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp CATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCTTAAAGACCCATTGTTaGACTCTGTACACATCTCTC +
Preference number: 4 (lower is better)
Translates to: HLSSNSPRRDTWHPGLCALKTHC*TLYTSL
Trigger: GAGAGATGTGTACAGAGTTCAACAATGGGTCTTTAA...GGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp CTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTTGGCTCTTGAATTGTTaGTATCTTTTATACCCTGCT +
Preference number: 4 (lower is better)
Translates to: LCASCLFSRGQGAQSPECWLLNC*YLLYPA
Trigger: AGCAGGGTATAAAAGATATCAACAATTCAAGAGCCA...ACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TGTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTGGTGGAGGTGGGCAGACTCCAGAAATCACCCTaGGAACAGCTTCACTTTGTT +
Preference number: 4 (lower is better)
Translates to: CPKYPEFLGQGTLVEVGRLQKSP*EQLHFV
Trigger: AACAAAGTGAAGCTGTTCTCAGGGTGATTTCTGGAG...TCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTCTCATGGACTGCTTATTaGTTGACTATATTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SNSPRRDTWHPGLCASCLSWTAY*LTIFRS
Trigger: GCTTCTGAATATAGTCAATCAATAAGCAGTCCATGA...GAGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp GAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCCGAACAAAGGAAGCATaGGACCACGTCTATCCTAAA +
Preference number: 4 (lower is better)
Translates to: EPRVWRDHSCCWCKIWLFRTKEA*DHVYPK
Trigger: TTTAGGATAGACGTGGTCTCATGCTTCCTTTGTTCG...GAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp GCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCATTCATGCTGCTGGTaGAAGATATGGCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: AQCESISPQIHQGGTLGTHSCCW*KIWLFL
Trigger: CAGGAAAAGCCATATCTTGCACCAGCAGCATGAATG...GGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp TCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTCCGTTTTAAAGAACTATaGCCTTACATCCCATTAGGT +
Preference number: 4 (lower is better)
Translates to: SNSPRRDTWHPGLCASCLRFKEL*PYIPLG
Trigger: ACCTAATGGGATGTAAGGGCATAGTTCTTTAAAACG...GAGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp TCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGAAACTTGATGCTCCCTaGTTTAGAATCCTGAATGTG +
Preference number: 4 (lower is better)
Translates to: SLLKFTKEGHLAPRAVCQKLDAP*FRILNV
Trigger: CACATTCAGGATTCTAAAGCAGGGAGCATCAAGTTT...CTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp TGGTTGTTAATCATTGAGCTGGGTCACACCAGCATCTATGCTGGGATCTCCCCCACATTCTGCTGCATCTaGCGAGGGTATAAACAACCC +
Preference number: 4 (lower is better)
Translates to: WLLIIELGHTSIYAGISPTFCCI*RGYKQP
Trigger: GGGTTGTTTATACCCTCGGCAGATGCAGCAGAATGT...GGGGGAGATCCCAGCATAGATGCTGGTGTGACCCAGCTCAATGATTAACAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp GAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTCTAGCCTGTCGTAATTaGAGGGTCATTTTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: ESISPQIHQGGTLGTQGCLACRN*RVIFAS
Trigger: AGAGGCAAAAATGACCCTGCAATTACGACAGGCTAG...ACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp CCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCGCTTCATGGTCATGCTaGACCCAGTATAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: PSVNPSLLKFTKEGHLAPASWSC*TQYSST
Trigger: TGTTGAACTATACTGGGTGCAGCATGACCATGAAGC...GGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCAACTTAGACGTAGGATaGGTACAGAATAATGAACCA +
Preference number: 4 (lower is better)
Translates to: SSNSPRRDTWHPGLCASCNLDVG*VQNNEP
Trigger: TGGTTCATTATTCTGTACCCATCCTACGTCTAAGTT...GCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp CCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCATACTGAGCTTGATCTaGGGCTGTCAGGTTACCTTT +
Preference number: 4 (lower is better)
Translates to: PSVNPSLLKFTKEGHLAPILSLI*GCQVTF
Trigger: AAAGGTAACCTGACAGCCCCAGATCAAGCTCAGTAT...GGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGTTGGAAACCACGGTGTaGAAAGTTCTTATAATTATG +
Preference number: 4 (lower is better)
Translates to: VPAASSQEVKEPRAQSVELETTV*KVLIIM
Trigger: CATAATTATAAGAACTTTCCACACCGTGGTTTCCAA...CTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCCTCTCCCTGCCCAGGAATaGATGTACATTAACATTGTC +
Preference number: 4 (lower is better)
Translates to: AQSVEGPFMLLVQDMAFPLPAQE*MYINIV
Trigger: GACAATGTTAATGTACATCCATTCCTGGGCAGGGAG...AGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TGGTTGTTAATCATTGAGCTGGGTCACACCAGCATCTATGCTGGGATCTCCCCCAACTTTTTGTTAAAGTaGTCTGGGGGTGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: WLLIIELGHTSIYAGISPNFLLK*SGGGLP
Trigger: AGGGAGCCCACCCCCAGACCACTTTAACAAAAAGTT...GGGGGAGATCCCAGCATAGATGCTGGTGTGACCCAGCTCAATGATTAACAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TCTGGTCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATATGCTGCCTGACTTGTaGATTTGCTTGTCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: SGQVQRAAGVGMGILRCNMLPDL*ICLSFV
Trigger: TACAAAGGACAAGCAAATCCACAAGTCAGGCAGCAT...ATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCTAGGCAAACTCCATaGCATTCTTTCAGACTTAGA +
Preference number: 4 (lower is better)
Translates to: SISPQIHQGGTLGTQGCVPRQTP*HSFRLR
Trigger: TCTAAGTCTGAAAGAATGCCATGGAGTTTGCCTAGG...CACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TGGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCTGGAAGTGCATCCACTaGATTTTTGTAGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: WAQCESISPQIHQGGTLGWKCIH*IFVGMR
Trigger: CCTCATCCCTACAAAAATCCAGTGGATGCACTTCCA...GCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGATGACAGAAGTAATTTaGAAGTGCATCCACTGGATT +
Preference number: 4 (lower is better)
Translates to: CVPAASSQEVKEPRAQSVMTEVI*KCIHWI
Trigger: AATCCAGTGGATGCACTTCCAAATTACTTCTGTCAT...CACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CAA 72 bp CCACTCAGCGCCTCTATTGGATGGTGTTTCAATGTCTaGGAAGGCATTGTCCCACATCTGAAGACCCCAATC +
Preference number: 4 (lower is better)
Translates to: PLSASIGWCFNV*EGIVPHLKTPI
Trigger: GATTGGGGTCTTCAGATGTGGGACAATGCCTTCCAAGACATTGAAACACCATCCAATAGAGGCGCTGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp GGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCATTCTGGTGGATATGGTaGTCTTCCAACTTTAGACTC +
Preference number: 4 (lower is better)
Translates to: GPSVNPSLLKFTKEGHLAFWWIW*SSNFRL
Trigger: GAGTCTAAAGTTGGAAGATCACCATATCCACCAGAA...TGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp GGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCATCTCAGAAAAGGCACTaGTTGAAAATGAGACAGTGC +
Preference number: 4 (lower is better)
Translates to: GPSVNPSLLKFTKEGHLASQKRH*LKMRQC
Trigger: GCACTGTCTCATTTTCAATCAGTGCCTTTTCTGAGA...TGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp TGTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTGGTGGAGGTGGGCAGAATTTTGTACAGGTTCTaGAGCATCACTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: CPKYPEFLGQGTLVEVGRILYRF*SITGWC
Trigger: ACACCATCCAGTGATGCTTCAGAACCTGTACAAAAT...TCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TCTTTCTTAAGAAATCTGTCCCTAGCCATATTAAGGGCCTCTGTGGAGTTTGGGCCATGCTCTGTGGGGTaGGCTGAGGTTTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SFLRNLSLAILRASVEFGPCSVG*AEVFWK
Trigger: CTTCCAGAAAACCTCAGCTCACCCCACAGAGCATGG...CCCAAACTCCACAGAGGCCCTTAATATGGCTAGGGACAGATTTCTTAAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp GCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCCTCAACATCTGTGCTGGTaGTGTTTGGAAGCTCAATTT +
Preference number: 4 (lower is better)
Translates to: AQSVEGPFMLLVQDMAFPQHLCW*CLEAQF
Trigger: AAATTGAGCTTCCAAACAGCACCAGCACAGATGTTG...AGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp CCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCCAAGTAAGAGAATACTaGAATCCAGGTAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: PSVNPSLLKFTKEGHLAPQVREY*NPGNGA
Trigger: GGCTCCATTACCTGGATTGCAGTATTCTCTTACTTG...GGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp GCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCCTTGGATGACTTCTTATTaGACATCTAGGCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: AQSVEGPFMLLVQDMAFPWMTSY*TSRLSW
Trigger: CCAAGAGAGCCTAGATGTGCAATAAGAAGTCATCCA...AGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp CCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCTTCTGCTGTGAGTTCTaGATCCTGTCCTCTTATGTT +
Preference number: 4 (lower is better)
Translates to: PSVNPSLLKFTKEGHLAPFCCEF*ILSSYV
Trigger: AACATAAGAGGACAGGATGCAGAACTCACAGCAGAA...GGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp CCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCTTTTTGCCTCTCGAATaGTGCCTGACTTGTGGATTT +
Preference number: 4 (lower is better)
Translates to: PSVNPSLLKFTKEGHLAPFLPLE*CLTCGF
Trigger: AAATCCACAAGTCAGGCAGCATTCGAGAGGCAAAAA...GGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TGTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTGGTGGAGGTGGGCAGATTCCTTAGAAAGAGGTaGCTGTGGAGTATAATCCAG +
Preference number: 4 (lower is better)
Translates to: CPKYPEFLGQGTLVEVGRFLRKR*LWSIIQ
Trigger: CTGGATTATACTCCACAGCCACCTCTTTCTAAGGAA...TCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCTTTCAACATCTGTGCTaGTGCTGTTTGGAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: AQCESISPQIHQGGTLGTFQHLC*CCLEAQ
Trigger: TTGAGCTTCCAAACAGCACCAGCACAGATGTTGAAA...GGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp GAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTTCGTTAAGGAATATGTaGCTTAGCAAGAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: ESISPQIHQGGTLGTQGCSLRNM*LSKSEH
Trigger: GTGCTCACTCTTGCTAAGCCACATATTCCTTAACGA...ACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TGTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTGGTGGAGGTGGGCAGAACAGGCCCAGAGTTTTaGAGTAATCTAAAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: CPKYPEFLGQGTLVEVGRTGPEF*SNLKWC
Trigger: ACACCACTTTAGATTACTCCAAAACTCTGGGCCTGT...TCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGAGAAGCACAAAGGTATaGACAGTGAAACAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: SLLKFTKEGHLAPRAVCQRSTKV*TVKQEE
Trigger: TTCTTCTTGTTTCACTGTCCATACCTTTGTGCTTCT...CTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp ATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTCAATGGCTAAGGCTATaGACATGTAGATCATTCCAA +
Preference number: 4 (lower is better)
Translates to: IHLSSNSPRRDTWHPGLCQWLRL*TCRSFQ
Trigger: TTGGAATGATCTACATGTTCATAGCCTTAGCCATTG...ACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp GAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGATGTTGAATACTGCTaGACCTACAATTGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: ESISPQIHQGGTLGTQGCDVEYC*TYNCAY
Trigger: ATAGGCACAATTGTAGGTTCAGCAGTATTCAACATC...ACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR TCA 90 bp TCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATTTAGGGATGTTGAATACTGCTaGACCTACAATTGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: SGAEGSWSWHGHSQMQFRDVEYC*TYNCAY
Trigger: ATAGGCACAATTGTAGGTTCAGCAGTATTCAACATC...CCTAAATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATTTAGGTGGTCTGTTTGCAGTTaGGTCAGTCACCTATTTAAA +
Preference number: 4 (lower is better)
Translates to: SGAEGSWSWHGHSQMQFRWSVCS*VSHLFK
Trigger: TTTAAATAGGTGACTGACTCAACTGCAAACAGACCA...CCTAAATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATTTAGGACCACCAAAGCATTATaGAATCTGCTGCTTTACATG +
Preference number: 4 (lower is better)
Translates to: SGAEGSWSWHGHSQMQFRTTKAL*NLLLYM
Trigger: CATGTAAAGCAGCAGATTTCATAATGCTTTGGTGGT...CCTAAATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTCTGATGGTAACCCTGTaGTACCCTAGGGCCACTTAC +
Preference number: 4 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNALMVTL*YPRATY
Trigger: GTAAGTGGCCCTAGGGTAGCACAGGGTTACCATCAG...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp ATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAATCATTCCAATGACATaGAGAATGATCGCACCTTTT +
Preference number: 4 (lower is better)
Translates to: ISPQIHQGGTLGTQGCVPIIPMT*RMIAPF
Trigger: AAAAGGTGCGATCATTCTGCATGTCATTGGAATGAT...TGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTGCCTGTGTCCTTGTTTaGATCGACTGTACCTCCGAC +
Preference number: 4 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNAACVLV*IDCTSD
Trigger: GTCGGAGGTACAGTCGATGCAAACAAGGACACAGGC...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp TCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATTTAGGCATTATGAAATCTGCTaGTTTACATGTCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: SGAEGSWSWHGHSQMQFRHYEIC*FTCPPK
Trigger: CTTGGGAGGACATGTAAAGCAGCAGATTTCATAATG...CCTAAATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp CCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCGTGTGTATCATGAGTTaGAAGATGCTATTCCTCATG +
Preference number: 4 (lower is better)
Translates to: PSVNPSLLKFTKEGHLAPVCIMS*KMLFLM
Trigger: CATGAGGAATAGCATCTTCCAACTCATGATACACAC...GGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp GAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTTTCTTGGCGATCTTGTaGAGAATTGAAGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ESISPQIHQGGTLGTQGCFLAIL*RIEAFS
Trigger: AGAAAAGGCTTCAATTCTCCACAAGATCGCCAAGAA...ACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp GCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCCTGTTCTGAAGCATCACTaGATGGTGTCATTTCAACAT +
Preference number: 4 (lower is better)
Translates to: AQSVEGPFMLLVQDMAFPVLKHH*MVSFQH
Trigger: ATGTTGAAATGACACCATCCAGTGATGCTTCAGAAC...AGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp CCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCGTTCTGAAGCATCACTaGATGGTGTCATTTCAACAT +
Preference number: 4 (lower is better)
Translates to: PSVNPSLLKFTKEGHLAPVLKHH*MVSFQH
Trigger: ATGTTGAAATGACACCATCCAGTGATGCTTCAGAAC...GGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CCA 90 bp TGGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCGAATTAAATCTTTGGTaGAAGCCTAGGCAAACTCCA +
Preference number: 4 (lower is better)
Translates to: WAQCESISPQIHQGGTLGELNLW*KPRQTP
Trigger: TGGAGTTTGCCTAGGCTTCCACCAAAGATTTAATTC...GCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCCTGGTACCCAGTTCTGGTaGATTTCTAGACTATTAAGT +
Preference number: 4 (lower is better)
Translates to: AQSVEGPFMLLVQDMAFPGTQFW*ISRLLS
Trigger: ACTTAATAGTCTAGAAATCCACCAGAACTGGGTACC...AGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCAATATCACTGGCCCTTaGTTCAGATACCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: EPRVWRDHSCCWCKIWLFNITGP*FRYPFF
Trigger: AAAGAAAGGGTATCTGAACCAAGGGCCAGTGATATT...GAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TGTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTGGTGGAGGTGGGCAGATCTTTGTCTTTTACATaGAGTCATTTCAGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: CPKYPEFLGQGTLVEVGRSLSFT*SHFSRQ
Trigger: CTGCCTACTGAAATGACTTCATGTAAAAGACAAAGA...TCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp GGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCAGGCTTTATTTTCGACTaGCATAGATCTGAGAAAACA +
Preference number: 4 (lower is better)
Translates to: GPSVNPSLLKFTKEGHLAGFIFD*HRSEKT
Trigger: TGTTTTCTCAGATCTATGTCAGTCGAAAATAAAGCC...TGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp GCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCCTAATACAAAACAGGAATaGCTCATGGACTGCTTATTG +
Preference number: 4 (lower is better)
Translates to: AQSVEGPFMLLVQDMAFPNTKQE*LMDCLL
Trigger: CAATAAGCAGTCCATGAGTCATTCCTGTTTTGTATT...AGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp AGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGAGAATGAAGTCCATGTaGCAGAAGTACATACTTCAG +
Preference number: 4 (lower is better)
Translates to: SVNPSLLKFTKEGHLAPRRMKSM*QKYILQ
Trigger: CTGAAGTATGTACTTCTGTCACATGGACTTCATTCT...CCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp ATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCATTGCGGTTTATCATTTaGTTCACCCATTTTTCTACT +
Preference number: 4 (lower is better)
Translates to: ISPQIHQGGTLGTQGCVPLRFII*FTHFST
Trigger: AGTAGAAAAATGGGTGAAGCAAATGATAAACCGCAA...TGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp TGGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCAATAACCAACTTGGTTaGCCTTCAAGAAATACACAG +
Preference number: 4 (lower is better)
Translates to: WAQCESISPQIHQGGTLGNNQLG*PSRNTQ
Trigger: CTGTGTATTTCTTGAAGGGCAACCAAGTTGGTTATT...GCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp GGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCATTTAAGTATGTGGATTaGTTGATGGTGGAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GPSVNPSLLKFTKEGHLAFKYVD*LMVEAV
Trigger: AACAGCTTCCACCATCAAGCAATCCACATACTTAAA...TGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TCTTTCTTAAGAAATCTGTCCCTAGCCATATTAAGGGCCTCTGTGGAGTTTGGGGTTCATCCTTGTCCCTaGCTGCAGATGGCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SFLRNLSLAILRASVEFGVHPCP*LQMALL
Trigger: AAGCAAAGCCATCTGCAGCCAGGGACAAGGATGAAC...CCCAAACTCCACAGAGGCCCTTAATATGGCTAGGGACAGATTTCTTAAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTTTACATCCCATTAGGTaGCAAGGCCCACTAAGCACC +
Preference number: 4 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNALHPIR*QGPLST
Trigger: GGTGCTTAGTGGGCCTTGCCACCTAATGGGATGTAA...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTACTTTAACCAAAGCCTaGTCCTGGTACCACTCGACC +
Preference number: 4 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNATLTKA*SWYHST
Trigger: GGTCGAGTGGTACCAGGACCAGGCTTTGGTTAAAGT...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TCTTTCTTAAGAAATCTGTCCCTAGCCATATTAAGGGCCTCTGTGGAGTTTGGGTTCTTCAGCTCTATCTaGCCAGCCACTCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: SFLRNLSLAILRASVEFGFFSSI*PATLPG
Trigger: ACCTGGTAGAGTGGCTGGCCAGATAGAGCTGAAGAA...CCCAAACTCCACAGAGGCCCTTAATATGGCTAGGGACAGATTTCTTAAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp AGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGAAGTCATTAAGTGGATaGGTTTGGGTTAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: SVNPSLLKFTKEGHLAPRKSLSG*VWVNLE
Trigger: CTCCAAGTTAACCCAAACCCATCCACTTAATGACTT...CCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CAA 72 bp TTTTTACCTCTTTCTGTCCTAAGTACCCTGAGTTTCTaGGTCAGGGTACTCTGGTGGAGGTGGGCAGATAGT +
Preference number: 4 (lower is better)
Translates to: FLPLSVLSTLSF*VRVLWWRWADS
Trigger: ACTATCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACAGAAAGAGGTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TGGTTGTTAATCATTGAGCTGGGTCACACCAGCATCTATGCTGGGATCTCCCCCTGTTGGCGTCAACGTTaGCAACATTTTCTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: WLLIIELGHTSIYAGISPCWRQR*QHFLCF
Trigger: AAAACAAAGAAAATGTTGTCAACGTTGACGCCAACA...GGGGGAGATCCCAGCATAGATGCTGGTGTGACCCAGCTCAATGATTAACAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp ATCTTTGGTGGAAGCCTAGGCAAACTCCATGGCATTCTTTCAGACTTAGATATTCACTGGCCTCTCCTGTaGTCTGTGTATCTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: IFGGSLGKLHGILSDLDIHWPLL*SVYLSQ
Trigger: CTGAGACAGATACACAGAGCACAGGAGAGGCCAGTG...AATATCTAAGTCTGAAAGAATGCCATGGAGTTTGCCTAGGCTTCCACCAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp GAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCTTGCGGTTTATCATTTaGTTCACCCATTTTTCTACT +
Preference number: 4 (lower is better)
Translates to: EPRVWRDHSCCWCKIWLFLRFII*FTHFST
Trigger: AGTAGAAAAATGGGTGAAGCAAATGATAAACCGCAA...GAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR GCA 90 bp ATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGTCATATTTTCTACTTaGATGCTGGGACAATATAAG +
Preference number: 4 (lower is better)
Translates to: IHLSSNSPRRDTWHPGLCVIFST*MLGQYK
Trigger: CTTATATTGTCCCAGCATGCAAGTAGAAAATATGAC...ACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp CATACTAGGTTAGAAATTGTGTATTTTAGCGGAGAGGAGGAAAATAACCACCAAGCCAAGCTGCTCTGCTaGCTTGGAAGTATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: HTRLEIVYFSGEEENNHQAKLLC*LGSMGE
Trigger: CTCCCCCATACTTCCAAGGCAGCAGAGCAGCTTGGC...TTGGTGGTTATTTTCCTCCTCTCCGCTAAAATACACAATTTCTAACCTAGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp CATACTAGGTTAGAAATTGTGTATTTTAGCGGAGAGGAGGAAAATAACCACCAATCTGAGCAAGGCTGGTaGCCCATGTGTGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HTRLEIVYFSGEEENNHQSEQGW*PMCEEG
Trigger: GCCTTCCTCACACATGGGGCACCAGCCTTGCTCAGA...TTGGTGGTTATTTTCCTCCTCTCCGCTAAAATACACAATTTCTAACCTAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TGGTTGTTAATCATTGAGCTGGGTCACACCAGCATCTATGCTGGGATCTCCCCCACTAAGCACCTTTACTaGATGACTTCTTATTGCACA +
Preference number: 4 (lower is better)
Translates to: WLLIIELGHTSIYAGISPTKHLY*MTSYCT
Trigger: TGTGCAATAAGAAGTCATCCAGTAAAGGTGCTTAGT...GGGGGAGATCCCAGCATAGATGCTGGTGTGACCCAGCTCAATGATTAACAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TGGTTGTTAATCATTGAGCTGGGTCACACCAGCATCTATGCTGGGATCTCCCCCATGGAATTAAATCTTTaGTGGAAGCCTAGGCAAACT +
Preference number: 4 (lower is better)
Translates to: WLLIIELGHTSIYAGISPMELNL*WKPRQT
Trigger: AGTTTGCCTAGGCTTCCACCAAAGATTTAATTCCAT...GGGGGAGATCCCAGCATAGATGCTGGTGTGACCCAGCTCAATGATTAACAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TGTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTGGTGGAGGTGGGCAGAGGCCTTAGTTACTTATaGATCCATTATGAAGGAATA +
Preference number: 4 (lower is better)
Translates to: CPKYPEFLGQGTLVEVGRGLSYL*IHYEGI
Trigger: TATTCCTTCATAATGGATCCATAAGTAACTAAGGCC...TCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTCAAGGGTGTGTATCATaGGTTGGAAGATGCTATTCC +
Preference number: 4 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNAQGCVS*VGRCYS
Trigger: GGAATAGCATCTTCCAACTCATGATACACACCCTTG...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TCTTTCTTAAGAAATCTGTCCCTAGCCATATTAAGGGCCTCTGTGGAGTTTGGGCTGGGTGAAGAGGAATaGTGGGCATTTCCTGTTATT +
Preference number: 4 (lower is better)
Translates to: SFLRNLSLAILRASVEFGLGEEE*WAFPVI
Trigger: AATAACAGGAAATGCCCATCATTCCTCTTCACCCAG...CCCAAACTCCACAGAGGCCCTTAATATGGCTAGGGACAGATTTCTTAAGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TCTTTCTTAAGAAATCTGTCCCTAGCCATATTAAGGGCCTCTGTGGAGTTTGGGCTGTACACATCTCTCTaGATTTACCCTGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: SFLRNLSLAILRASVEFGLYTSL*IYPGST
Trigger: TGTTGAGCCAGGGTAAATTCAGAGAGATGTGTACAG...CCCAAACTCCACAGAGGCCCTTAATATGGCTAGGGACAGATTTCTTAAGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp AGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGAATATCAAGGCTAGATaGAGGGTATATATGTGTACT +
Preference number: 4 (lower is better)
Translates to: SVNPSLLKFTKEGHLAPRNIKAR*RVYMCT
Trigger: AGTACACATATATACCCTGCATCTAGCCTTGATATT...CCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GAGTATTTTGGAGAACTGTTAGTCTCCAAGGCCTTAGTTACTTATGGATCCATTTCCTCATCAGCGGTCTaGGCTTCTGCACCTTCAATG +
Preference number: 4 (lower is better)
Translates to: EYFGELLVSKALVTYGSISSSAV*ASAPSM
Trigger: CATTGAAGGTGCAGAAGCCCAGACCGCTGATGAGGA...AATGGATCCATAAGTAACTAAGGCCTTGGAGACTAACAGTTCTCCAAAATACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTAGTGTGTACATTAGCTaGGGGGAGTCATTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNASVYIS*GESLWK
Trigger: TTTCCACAATGACTCCCCCCAGCTAATGTACACACT...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CAA 72 bp ATGCAATTTAGGAGTTTCTATTTGGGAATTGTCAGTTaGAGCCAAGCTGCTCTGCTGCCTTGGAAGTATGGG +
Preference number: 4 (lower is better)
Translates to: MQFRSFYLGIVS*SQAALLPWKYG
Trigger: CCCATACTTCCAAGGCAGCAGAGCAGCTTGGCTCAAACTGACAATTCCCAAATAGAAACTCCTAAATTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTTCTCAGAAAAGGCACTaGTTGAAAATGAGACAGTGC +
Preference number: 4 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNASQKRH*LKMRQC
Trigger: GCACTGTCTCATTTTCAATCAGTGCCTTTTCTGAGA...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp GAGTATTTTGGAGAACTGTTAGTCTCCAAGGCCTTAGTTACTTATGGATCCATTGCCCAGACTGCAAGTTaGTGCCCCTCTTCAAATAAG +
Preference number: 4 (lower is better)
Translates to: EYFGELLVSKALVTYGSIAQTAS*CPSSNK
Trigger: CTTATTTGAAGAGGGGCATCAACTTGCAGTCTGGGC...AATGGATCCATAAGTAACTAAGGCCTTGGAGACTAACAGTTCTCCAAAATACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TATGTTATAGAGCAAATGTCTATGTTGGCGTCAACGTTGACAACATTTTCTTTGGTCAGGGTACTCTGGTaGAGGTGGGCAGATAGTCTC +
Preference number: 4 (lower is better)
Translates to: YVIEQMSMLASTLTTFSLVRVLW*RWADSL
Trigger: GAGACTATCTGCCCACCTCCACCAGAGTACCCTGAC...CAAAGAAAATGTTGTCAACGTTGACGCCAACATAGACATTTGCTCTATAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TCTTTCTTAAGAAATCTGTCCCTAGCCATATTAAGGGCCTCTGTGGAGTTTGGGAGCGCCTCTATTGGATaGTGTTTCAATGTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SFLRNLSLAILRASVEFGSASIG*CFNVLE
Trigger: TTCCAAGACATTGAAACACCATCCAATAGAGGCGCT...CCCAAACTCCACAGAGGCCCTTAATATGGCTAGGGACAGATTTCTTAAGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TATGTTATAGAGCAAATGTCTATGTTGGCGTCAACGTTGACAACATTTTCTTTGCAGTTCATCAGGATCTaGTCAGGTGCAGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: YVIEQMSMLASTLTTFSLQFIRI*SGAEGS
Trigger: GCTGCCCTCTGCACCTGACCAGATCCTGATGAACTG...CAAAGAAAATGTTGTCAACGTTGACGCCAACATAGACATTTGCTCTATAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GAGTATTTTGGAGAACTGTTAGTCTCCAAGGCCTTAGTTACTTATGGATCCATTAGCTATGTGCAGTGGTaGGGAGTTTGCCAACTCTCT +
Preference number: 4 (lower is better)
Translates to: EYFGELLVSKALVTYGSISYVQW*GVCQLS
Trigger: AGAGAGTTGGCAAACTCCCCACCACTGCACATAGCT...AATGGATCCATAAGTAACTAAGGCCTTGGAGACTAACAGTTCTCCAAAATACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TCTTTCTTAAGAAATCTGTCCCTAGCCATATTAAGGGCCTCTGTGGAGTTTGGGAGCACCTTTACTGGATaGCTTCTTATTGCACATCTA +
Preference number: 4 (lower is better)
Translates to: SFLRNLSLAILRASVEFGSTFTG*LLIAHL
Trigger: TAGATGTGCAATAAGAAGTCATCCAGTAAAGGTGCT...CCCAAACTCCACAGAGGCCCTTAATATGGCTAGGGACAGATTTCTTAAGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp TATGTTATAGAGCAAATGTCTATGTTGGCGTCAACGTTGACAACATTTTCTTTGTTACATGCCACAACCTaGGCAGGTCCAAAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: YVIEQMSMLASTLTTFSLLHATT*AGPKLL
Trigger: CAGGAGCTTTGGACCTGCGCAGGTTGTGGCATGTAA...CAAAGAAAATGTTGTCAACGTTGACGCCAACATAGACATTTGCTCTATAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TCTTTCTTAAGAAATCTGTCCCTAGCCATATTAAGGGCCTCTGTGGAGTTTGGGAACACACTGCAGTACTaGTTAATAAGTGGAGATCCA +
Preference number: 4 (lower is better)
Translates to: SFLRNLSLAILRASVEFGNTLQY*LISGDP
Trigger: TGGATCTCCACTTATTAACCAGTACTGCAGTGTGTT...CCCAAACTCCACAGAGGCCCTTAATATGGCTAGGGACAGATTTCTTAAGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GAAACAAGAAGAAACACCCTTTATCAGAATGAAGTCCATGTGACAGAAGTACATAAAATTAGCCAGGCATaGTGGCATGTGCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: ETRRNTLYQNEVHVTEVHKISQA*WHVPEV
Trigger: GACCTCAGGCACATGCCACCATGCCTGGCTAATTTT...ATGTACTTCTGTCACATGGACTTCATTCTGATAAAGGGTGTTTCTTCTTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TATGTTATAGAGCAAATGTCTATGTTGGCGTCAACGTTGACAACATTTTCTTTGCTCTCGAATGCTGCCTaGCTTGTGGATTTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: YVIEQMSMLASTLTTFSLLSNAA*LVDLLV
Trigger: GACAAGCAAATCCACAAGTCAGGCAGCATTCGAGAG...CAAAGAAAATGTTGTCAACGTTGACGCCAACATAGACATTTGCTCTATAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GAGTATTTTGGAGAACTGTTAGTCTCCAAGGCCTTAGTTACTTATGGATCCATTACATCTAGGCTCTCTTaGCAGCCCTTAGCATCAAAA +
Preference number: 4 (lower is better)
Translates to: EYFGELLVSKALVTYGSITSRLS*QPLASK
Trigger: TTTTGATGCTAAGGGCTGCCAAGAGAGCCTAGATGT...AATGGATCCATAAGTAACTAAGGCCTTGGAGACTAACAGTTCTCCAAAATACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp CATACTAGGTTAGAAATTGTGTATTTTAGCGGAGAGGAGGAAAATAACCACCAAGGAGAAGCCCTGTATTaGCGGTTCTCTTTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: HTRLEIVYFSGEEENNHQGEALY*RFSLSF
Trigger: AAAAGACAAAGAGAACCGTCAATACAGGGCTTCTCC...TTGGTGGTTATTTTCCTCCTCTCCGCTAAAATACACAATTTCTAACCTAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp ATCTTTGGTGGAAGCCTAGGCAAACTCCATGGCATTCTTTCAGACTTAGATATTTGCATAAACACCATCTaGTCTTCAGCTTCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: IFGGSLGKLHGILSDLDICINTI*SSASVH
Trigger: ATGAACTGAAGCTGAAGATCAGATGGTGTTTATGCA...AATATCTAAGTCTGAAAGAATGCCATGGAGTTTGCCTAGGCTTCCACCAAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp GAAACAAGAAGAAACACCCTTTATCAGAATGAAGTCCATGTGACAGAAGTACATTGCTGGTGCAAGATATaGCTTTTCCTGCTAGATGGA +
Preference number: 4 (lower is better)
Translates to: ETRRNTLYQNEVHVTEVHCWCKI*LFLLDG
Trigger: TCCATCTAGCAGGAAAAGCCATATCTTGCACCAGCA...ATGTACTTCTGTCACATGGACTTCATTCTGATAAAGGGTGTTTCTTCTTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp TATGTTATAGAGCAAATGTCTATGTTGGCGTCAACGTTGACAACATTTTCTTTGACAGAGGAATATCACTaGCCCTTGGTTCAGATACCC +
Preference number: 4 (lower is better)
Translates to: YVIEQMSMLASTLTTFSLTEEYH*PLVQIP
Trigger: GGGTATCTGAACCAAGGGCCAGTGATATTCCTCTGT...CAAAGAAAATGTTGTCAACGTTGACGCCAACATAGACATTTGCTCTATAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CAA 72 bp TACATGACAATCACAGCTAAACTTACCCCTCTTCTTTaGATGATAATGGGACATGCGCTGGAAAAATACAGG +
Preference number: 4 (lower is better)
Translates to: YMTITAKLTPLL*MIMGHALEKYR
Trigger: CCTGTATTTTTCCAGCGCATGTCCCATTATCATCAAAAGAAGAGGGGTAAGTTTAGCTGTGATTGTCATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CAA 72 bp ACCCAAGCAGTGCTGATCAGAGTTAAGTTAGTGCTATaGGGAATAATGATTTCTTCAGACACTAAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: TQAVLIRVKLVL*GIMISSDTKAL
Trigger: AAGGGCTTTAGTGTCTGAAGAAATCATTATTCCCAATAGCACTAACTTAACTCTGATCAGCACTGCTTGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CAA 72 bp GGGCAATTTGGCCACTTAAGCATAAAATTGATGGGGTaGTCCAGTTTAGTACCCATGTTTACTCTATATGGA +
Preference number: 4 (lower is better)
Translates to: GQFGHLSIKLMG*SSLVPMFTLYG
Trigger: TCCATATAGAGTAAACATGGGTACTAAACTGGACAACCCCATCAATTTTATGCTTAAGTGGCCAAATTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp TATGTTATAGAGCAAATGTCTATGTTGGCGTCAACGTTGACAACATTTTCTTTGGTTCGTACGCTAATTTaGAAACAGTTGCCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: YVIEQMSMLASTLTTFSLVRTLI*KQLPSL
Trigger: CAGGCTAGGCAACTGTTTTCAAATTAGCGTACGAAC...CAAAGAAAATGTTGTCAACGTTGACGCCAACATAGACATTTGCTCTATAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp ATCTTTGGTGGAAGCCTAGGCAAACTCCATGGCATTCTTTCAGACTTAGATATTACACTGTTCAGACAGTaGTTATCATTAGTCATAAGG +
Preference number: 4 (lower is better)
Translates to: IFGGSLGKLHGILSDLDITLFRQ*LSLVIR
Trigger: CCTTATGACTAATGATAATCACTGTCTGAACAGTGT...AATATCTAAGTCTGAAAGAATGCCATGGAGTTTGCCTAGGCTTCCACCAAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR TCA 90 bp CATACTAGGTTAGAAATTGTGTATTTTAGCGGAGAGGAGGAAAATAACCACCAACACCCTTTATCAGAATaGAGTCCATGTGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: HTRLEIVYFSGEEENNHQHPLSE*SPCDRS
Trigger: ACTTCTGTCACATGGACTTCATTCTGATAAAGGGTG...TTGGTGGTTATTTTCCTCCTCTCCGCTAAAATACACAATTTCTAACCTAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp TATGTTATAGAGCAAATGTCTATGTTGGCGTCAACGTTGACAACATTTTCTTTGAGAGCTTCATGGTCATaGTGCACCCAGTATAGTTCA +
Preference number: 4 (lower is better)
Translates to: YVIEQMSMLASTLTTFSLRASWS*CTQYSS
Trigger: TGAACTATACTGGGTGCAGCATGACCATGAAGCTCT...CAAAGAAAATGTTGTCAACGTTGACGCCAACATAGACATTTGCTCTATAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp CATACTAGGTTAGAAATTGTGTATTTTAGCGGAGAGGAGGAAAATAACCACCAATTTCAACATCTGTGCTaGTGCTGTTTGGAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: HTRLEIVYFSGEEENNHQFQHLC*CCLEAQ
Trigger: TTGAGCTTCCAAACAGCACCAGCACAGATGTTGAAA...TTGGTGGTTATTTTCCTCCTCTCCGCTAAAATACACAATTTCTAACCTAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
3UTR CAA 72 bp CTTTCTTTAGGGCAATTTGGCCACTTAAGCATAAAATaGATGGGGTTGTCCAGTTTAGTACCCATGTTTACT +
Preference number: 4 (lower is better)
Translates to: LSLGQFGHLSIK*MGLSSLVPMFT
Trigger: AGTAAACATGGGTACTAAACTGGACAACCCCATCAATTTTATGCTTAAGTGGCCAAATTGCCCTAAAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CCA 90 bp CATACTAGGTTAGAAATTGTGTATTTTAGCGGAGAGGAGGAAAATAACCACCAATTAGGTACCCAGTTCTaGTGGATTTCTAGACTATTA +
Preference number: 4 (lower is better)
Translates to: HTRLEIVYFSGEEENNHQLGTQF*WISRLL
Trigger: TAATAGTCTAGAAATCCACCAGAACTGGGTACCTAA...TTGGTGGTTATTTTCCTCCTCTCCGCTAAAATACACAATTTCTAACCTAGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR GCA 90 bp GAAACAAGAAGAAACACCCTTTATCAGAATGAAGTCCATGTGACAGAAGTACATGAAGTAATTTGGAAGTaGATCCACTGGATTTTTGTA +
Preference number: 4 (lower is better)
Translates to: ETRRNTLYQNEVHVTEVHEVIWK*IHWIFV
Trigger: TACAAAAATCCAGTGGATGCACTTCCAAATTACTTC...ATGTACTTCTGTCACATGGACTTCATTCTGATAAAGGGTGTTTCTTCTTGTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGGTGGCTGCAGATGGCTTaGCTTGGGCTTCTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: CQLPLLKRSRSPEPRVWRWLQMA*LGLLVL
Trigger: CAGCACCAGAAGCCCAAGCAAAGCCATCTGCAGCCA...CCTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp TGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGGCGAGGCAGCTGCGTTTaGCTGAAAGGGCTCCAAACC +
Preference number: 5 (lower is better)
Translates to: CQLPLLKRSRSPEPRVWRRGSCV*LKGLQT
Trigger: GGTTTGGAGCCCTTTCAGCAAAACGCAGCTGCCTCG...CCTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS CCA 90 bp GTGACTTGCTTGCGGGTTTCAGAAGGCCAGGCAAGGCTGAGAGGCTaGTCCTCCTCCTCATCAGCGGTCTGGGCTTCTGCACCTTCAATG +
Preference number: 5 (lower is better)
Translates to: VTCLRVSEGQARLRG*SSSSSAVWASAPSM
Trigger: CATTGAAGGTGCAGAAGCCCAGACCGCTGATGAGGAGGAGGACCAGCCTCTCAGCCTTGCCTGGCCTTCTGAAACCCGCAAGCAAGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp GGGCTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGAGTGATGGTGGTGCTTaGTTGCAGATCCATCCTGGG +
Preference number: 5 (lower is better)
Translates to: GLCASCLFSRGQGAQSPESDGGA*LQIHPG
Trigger: CCCAGGATGGATCTGCAACAAAGCACCACCATCACT...CTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp TCTGGTCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATGCAGTGGTGGGGAGTTaGCCAACTCTCTCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: SGQVQRAAGVGMGILRCNAVVGS*PTLSLP
Trigger: GGGCAGGGAGAGAGTTGGCAAACTCCCCACCACTGC...ATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCTGCAGATGGCTTTGCTaGGGCTTCTGGTGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: SSNSPRRDTWHPGLCASCCRWLC*GFWCCH
Trigger: GTGACAGCACCAGAAGCCCAAGCAAAGCCATCTGCA...GCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTAGAGTTGGTTCATCCTaGTCCCTGGCTGCAGATGGC +
Preference number: 5 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPRVGSS*SLAADG
Trigger: GCCATCTGCAGCCAGGGACAAGGATGAACCAACTCT...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp ATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTACCAAGGAGGGACACTaGGCACCCAGGGCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: IHLSSNSPRRDTWHPGLCTKEGH*APRAVC
Trigger: GCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGT...ACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp CCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCACCAAGGAGGGACACTaGGCACCCAGGGCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: PSVNPSLLKFTKEGHLAPTKEGH*APRAVC
Trigger: GCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGT...GGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp TCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCCGAGTTGGAGAGACTaGAAAGCCAGCCTCCGACTG +
Preference number: 5 (lower is better)
Translates to: SLLKFTKEGHLAPRAVCQPSWRD*KASLRL
Trigger: CAGTCGGAGGCTGGCTTTCAAGTCTCTCCAACTCGG...CTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS GCA 90 bp AGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTaGTGGTGCAAGATATGGCTTTTCCTGCTAGATGGAGACGGGGCA +
Preference number: 5 (lower is better)
Translates to: RSRSPEPRVWRDHSC*WCKIWLFLLDGDGA
Trigger: TGCCCCGTCTCCATCTAGCAGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGGCTCCTTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp GGGCTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTTTCGGGTAGTCTCCTaGGGCGTGATCTGTACTATT +
Preference number: 5 (lower is better)
Translates to: GLCASCLFSRGQGAQSPEFRVVS*GVICTI
Trigger: AATAGTACAGATCACGCCCAAGGAGACTACCCGAAA...CTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTTTCCTCATGAGACTGTaGTGGAGGGAGGCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPFLMRL*WREAEL
Trigger: AAGCTCTGCCTCCCTCCACAACAGTCTCATGAGGAA...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp TGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGCAGGGGGCCTCGGGTTaGAAGTGCTTTTTACTTCTG +
Preference number: 5 (lower is better)
Translates to: CVPAASSQEVKEPRAQSVQGASG*KCFLLL
Trigger: CAGAAGTAAAAAGCACTTCAAACCCGAGGCCCCCTG...CACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS GCA 90 bp AGGAGCCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTaGAAGATATGGCTTTTCCTGCTAGATGGAGACGGGGCATGTAAG +
Preference number: 5 (lower is better)
Translates to: RSPEPRVWRDHSCCW*KIWLFLLDGDGACK
Trigger: CTTACATGCCCCGTCTCCATCTAGCAGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS GCA 90 bp AAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGGGACCATTCATaGTGCTGGTGCAAGATATGGCTTTTCCTGCTAGATGGAGACGGG +
Preference number: 5 (lower is better)
Translates to: KRSRSPEPRVWRDHS*CWCKIWLFLLDGDG
Trigger: CCCGTCTCCATCTAGCAGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS CCA 90 bp TCAAGGAGCCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTaGTGCAAGATATGGCTTTTCCTGCTAGATGGAGACGGGGCATGT +
Preference number: 5 (lower is better)
Translates to: SRSPEPRVWRDHSCC*CKIWLFLLDGDGAC
Trigger: ACATGCCCCGTCTCCATCTAGCAGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGGCTCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp GCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCTGGCTGCAGATGGCTTaGCTTGGGCTTCTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: AQCESISPQIHQGGTLGTWLQMA*LGLLVL
Trigger: CAGCACCAGAAGCCCAAGCAAAGCCATCTGCAGCCA...GGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp TCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGTTCCTCATGAGACTGTaGTGGAGGGAGGCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: SLLKFTKEGHLAPRAVCQFLMRL*WREAEL
Trigger: AAGCTCTGCCTCCCTCCACAACAGTCTCATGAGGAA...CTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp AGGGCTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGATTCCTCGATGAAGGTTaGCGAACGTCAGGTAACGTA +
Preference number: 5 (lower is better)
Translates to: RAVCQLPLLKRSRSPEPRFLDEG*RTSGNV
Trigger: TACGTTACCTGACGTTCGCAAACCTTCATCGAGGAA...TCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp TCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCGCTTGTAGGAATGTTTaGGAAGGCTCAACTCAGGGC +
Preference number: 5 (lower is better)
Translates to: SSNSPRRDTWHPGLCASCACRNV*EGSTQG
Trigger: GCCCTGAGTTGAGCCTTCCAAAACATTCCTACAAGC...GCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TGTCCTAAGTACCCTGAGTTTCTTGGTCAGGGTACTCTGGTGGAGGTGGGCAGAAGCTGCTCTGCTGCCTaGGAAGTATGGGGGAGGGTA +
Preference number: 5 (lower is better)
Translates to: CPKYPEFLGQGTLVEVGRSCSAA*EVWGRV
Trigger: TACCCTCCCCCATACTTCCAAGGCAGCAGAGCAGCT...TCTGCCCACCTCCACCAGAGTACCCTGACCAAGAAACTCAGGGTACTTAGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp ATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAAGAGGGCAGCTGGAGTaGGCATGGGCATTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: ISPQIHQGGTLGTQGCVPRGQLE*AWAFSD
Trigger: ATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCT...TGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS CCA 90 bp GTGTGTATCATGAGTTGGAAGATGCTATTCCTCATGAGACTGTTGTaGAGGGAGGCAGAGCTTCCACCTCGCTGGAGACGCGGCTTAGCC +
Preference number: 5 (lower is better)
Translates to: VCIMSWKMLFLMRLL*REAELPPRWRRGLA
Trigger: GGCTAAGCCGCGTCTCCAGCGAGGTGGAAGCTCTGCCTCCCTCCACAACAGTCTCATGAGGAATAGCATCTTCCAACTCATGATACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp GCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCAGAGTTGGTTCATCCTaGTCCCTGGCTGCAGATGGC +
Preference number: 5 (lower is better)
Translates to: AQCESISPQIHQGGTLGTRVGSS*SLAADG
Trigger: GCCATCTGCAGCCAGGGACAAGGATGAACCAACTCT...GGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp GGGCTGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTTCTTCTTGGCGATCTaGTGGAGAATTGAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: GLCASCLFSRGQGAQSPEFFLAI*WRIEAF
Trigger: AAAGGCTTCAATTCTCCACAAGATCGCCAAGAAGAA...CTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTAATCAGAAACGTGACTaGCTTGCGGGTTTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPNQKRD*LAGFRR
Trigger: CCTTCTGAAACCCGCAAGCAAGTCACGTTTCTGATT...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp GCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCCTCCAAGCATCGCTAAGTaGCCTCAACCCAAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: AQSVEGPFMLLVQDMAFPPSIAK*PQPKQC
Trigger: GCACTGCTTGGGTTGAGGCAACTTAGCGATGCTTGG...AGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS CCA 90 bp CTGAACCTCCCTTCGGCGAGTGGGTCAAGGGTGTGTATCATGAGTTaGAAGATGCTATTCCTCATGAGACTGTTGTGGAGGGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LNLPSASGSRVCIMS*KMLFLMRLLWREAE
Trigger: CTCTGCCTCCCTCCACAACAGTCTCATGAGGAATAGCATCTTCCAACTCATGATACACACCCTTGACCCACTCGCCGAAGGGAGGTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286344.3
CDS-3UTR CAA 90 bp AGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGTGCAGATGGCTTTGCTaGGGCTTCTGGTGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: SVNPSLLKFTKEGHLAPRCRWLC*GFWCCH
Trigger: GTGACAGCACCAGAAGCCCAAGCAAAGCCATCTGCA...CCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp GTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGGGTGTGTATCATGAGTaGGAAGATGCTATTCCTCAT +
Preference number: 5 (lower is better)
Translates to: VPAASSQEVKEPRAQSVEGVYHE*EDAIPH
Trigger: ATGAGGAATAGCATCTTCCAACTCATGATACACACC...CTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp GTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGTTCTTCTTGGCGATCTaGTGGAGAATTGAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: VPAASSQEVKEPRAQSVEFFLAI*WRIEAF
Trigger: AAAGGCTTCAATTCTCCACAAGATCGCCAAGAAGAA...CTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp ATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTAGAAACGTGACTTGCTaGCGGGTTTCAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: IHLSSNSPRRDTWHPGLCRNVTC*RVSEGQ
Trigger: CTGGCCTTCTGAAACCCGCAAGCAAGTCACGTTTCT...ACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp TGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGTGATGTCAAAAATGTaGCTTCCAACAGAGCTGGAC +
Preference number: 5 (lower is better)
Translates to: CVPAASSQEVKEPRAQSVVMSKM*LPTELD
Trigger: GTCCAGCTCTGTTGGAAGCAACATTTTTGACATCAC...CACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp GAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTTTGTTCATTCGCCACTaGCAGAGGGCGATAGAGAGG +
Preference number: 5 (lower is better)
Translates to: ESISPQIHQGGTLGTQGCLFIRH*QRAIER
Trigger: CCTCTCTATCGCCCTCTGCAAGTGGCGAATGAACAA...ACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp GCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCCTTTGTTCATTCGCCACTaGCAGAGGGCGATAGAGAGG +
Preference number: 5 (lower is better)
Translates to: AQSVEGPFMLLVQDMAFPLFIRH*QRAIER
Trigger: CCTCTCTATCGCCCTCTGCAAGTGGCGAATGAACAA...AGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp GGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCAAGCCTGTGTCCTTGTTaGCATCGACTGTACCTCCGA +
Preference number: 5 (lower is better)
Translates to: GPSVNPSLLKFTKEGHLASLCPC*HRLYLR
Trigger: TCGGAGGTACAGTCGATGCAAACAAGGACACAGGCT...TGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp ATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTAGTACCCTGAGTTTCTaGGTCAGGGTACTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: IHLSSNSPRRDTWHPGLCSTLSF*VRVLWW
Trigger: CCACCAGAGTACCCTGACCAAGAAACTCAGGGTACT...ACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp GCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCAGCCATCTTGATTTCTaGTTTTCCCAGGGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: AQCESISPQIHQGGTLGTSHLDF*FSQGAS
Trigger: CGAGGCCCCCTGGGAAAACAAGAAATCAAGATGGCT...GGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp CCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTCACTCAGCGCCTCTATaGGATGGTGTTTCAATGTCT +
Preference number: 5 (lower is better)
Translates to: PRAQSVEGPFMLLVQDMAHSAPL*DGVSMS
Trigger: AGACATTGAAACACCATCCAATAGAGGCGCTGAGTG...AGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGAAGTATGTGGATTGCTaGATGGTGGAAGCTGTTGCT +
Preference number: 5 (lower is better)
Translates to: CVPAASSQEVKEPRAQSVKYVDC*MVEAVA
Trigger: AGCAACAGCTTCCACCATCAAGCAATCCACATACTT...CACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGCAAATGTCTATGTaGGCGTCAACGTTGACAACA +
Preference number: 5 (lower is better)
Translates to: CVPAASSQEVKEPRAQSVEQMSM*ASTLTT
Trigger: TGTTGTCAACGTTGACGCCAACATAGACATTTGCTC...CACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS CCA 90 bp GAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATaGCTTTTCCTGCTAGATGGAGACGGGGCATGTAAGAATTCTGTC +
Preference number: 5 (lower is better)
Translates to: EPRVWRDHSCCWCKI*LFLLDGDGACKNSV
Trigger: GACAGAATTCTTACATGCCCCGTCTCCATCTAGCAGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp GCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCCTCTGCTGAACCTACAATaGTGCCTATGCCAACGTTGC +
Preference number: 5 (lower is better)
Translates to: AQSVEGPFMLLVQDMAFPLLNLQ*CLCQRC
Trigger: GCAACGTTGGCATAGGCACAATTGTAGGTTCAGCAG...AGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp TCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTCACCTTGACGACCTTATaGCGGTTTATCATTTGCTTC +
Preference number: 5 (lower is better)
Translates to: SNSPRRDTWHPGLCASCLTLTTL*RFIICF
Trigger: GAAGCAAATGATAAACCGCAATAAGGTCGTCAAGGT...GAGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp CCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCTCTGGTGCTGTCACCTaGACGACCTTATTGCGGTTT +
Preference number: 5 (lower is better)
Translates to: PSVNPSLLKFTKEGHLAPSGAVT*TTLLRF
Trigger: AAACCGCAATAAGGTCGTCAAGGTGACAGCACCAGA...GGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp GCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCCTTCTGGTGCTGTCACCTaGACGACCTTATTGCGGTTT +
Preference number: 5 (lower is better)
Translates to: AQSVEGPFMLLVQDMAFPSGAVT*TTLLRF
Trigger: AAACCGCAATAAGGTCGTCAAGGTGACAGCACCAGA...AGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp GCCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTCTGCACCTTCAATGTaGTGGGAGAGATTTCCATTT +
Preference number: 5 (lower is better)
Translates to: AQSPECGGTIHAAGARYGSAPSM*WERFPF
Trigger: AAATGGAAATCTCTCCCACAACATTGAAGGTGCAGA...GCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp TCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGGGTGTCATACAGAACTaGGGGGCGTGGAATATTTTA +
Preference number: 5 (lower is better)
Translates to: SLLKFTKEGHLAPRAVCQGVIQN*GAWNIL
Trigger: TAAAATATTCCACGCCCCCAAGTTCTGTATGACACC...CTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp GGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCAGAAGGAATACTGAGCTaGATCTGGGGCTGTCAGGTT +
Preference number: 5 (lower is better)
Translates to: GPSVNPSLLKFTKEGHLAEGILS*IWGCQV
Trigger: AACCTGACAGCCCCAGATCAAGCTCAGTATTCCTTC...TGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp GCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCGACTGGCAGCCATCTaGATTTCTTGTTTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: AQCESISPQIHQGGTLGTRLAAI*ISCFPR
Trigger: CCTGGGAAAACAAGAAATCAAGATGGCTGCCAGTCG...GGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp GGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCATTGGGAATTGTCAGTTaGAGCCAAGCTGCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: GPSVNPSLLKFTKEGHLALGIVS*SQAALL
Trigger: CAGCAGAGCAGCTTGGCTCAAACTGACAATTCCCAA...TGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp CATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCGACTTGTGGATTTGCTaGTCCTTTGTAGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: HLSSNSPRRDTWHPGLCADLWIC*SFVAAS
Trigger: AGAAGCAGCTACAAAGGACAAGCAAATCCACAAGTC...GGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGGATAAAATTGATGGGGTaGTCCAGTTTAGTACCCATG +
Preference number: 5 (lower is better)
Translates to: CQLPLLKRSRSPEPRVWRIKLMG*SSLVPM
Trigger: CATGGGTACTAAACTGGACAACCCCATCAATTTTAT...CCTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS TCA 90 bp TGCAGCCAGACAGTGACTCATCCAAACACCATTTCTCTAGGGAAGTaGTGGTGGTGCTTTGTTGCAGATCCATCCTGGGTCTTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: CSQTVTHPNTISLGK*WWCFVADPSWVFWW
Trigger: CCACCAGAAGACCCAGGATGGATCTGCAACAAAGCACCACCATCACTTCCCTAGAGAAATGGTGTTTGGATGAGTCACTGTCTGGCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS CCA 90 bp GATCCAAGTTCTTCGGCGAGTGGGTCAAGGGTGTGTATCATGAGTTaGAAGATGCTATTCCTCATGAGACTGTTGTGGAGGGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: DPSSSASGSRVCIMS*KMLFLMRLLWREAE
Trigger: CTCTGCCTCCCTCCACAACAGTCTCATGAGGAATAGCATCTTCCAACTCATGATACACACCCTTGACCCACTCGCCGAAGAACTTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp GAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCTTTCGGGTAGTCTCCTaGGGCGTGATCTGTACTATT +
Preference number: 5 (lower is better)
Translates to: EPRVWRDHSCCWCKIWLFFRVVS*GVICTI
Trigger: AATAGTACAGATCACGCCCAAGGAGACTACCCGAAA...GAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp CCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAATCAGAAACGTGACTaGCTTGCGGGTTTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: PSVNPSLLKFTKEGHLAPNQKRD*LAGFRR
Trigger: CCTTCTGAAACCCGCAAGCAAGTCACGTTTCTGATT...GGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp ATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCACTTACCCCTCTTCTTTaGATGATAATGGGACATGCG +
Preference number: 5 (lower is better)
Translates to: ISPQIHQGGTLGTQGCVPLTPLL*MIMGHA
Trigger: CGCATGTCCCATTATCATCAAAAGAAGAGGGGTAAG...TGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGCACACAATAACCAACTaGGTTGCCCTTCAAGAAATA +
Preference number: 5 (lower is better)
Translates to: CVPAASSQEVKEPRAQSVHTITN*VALQEI
Trigger: TATTTCTTGAAGGGCAACCAAGTTGGTTATTGTGTG...CACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGTTTTACATGGTCTGTTaGCAGTTGAGTCAGTCACCT +
Preference number: 5 (lower is better)
Translates to: SLLKFTKEGHLAPRAVCQFYMVC*QLSQSP
Trigger: AGGTGACTGACTCAACTGCAAACAGACCATGTAAAA...CTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTTGGTTTAAAGACCCATaGTTGAACTCTGTACACATC +
Preference number: 5 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPWFKDP*LNSVHI
Trigger: GATGTGTACAGAGTTCAACAATGGGTCTTTAAACCA...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp CTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAGCTGCCTGAAGAAATGTTCCCTTaGGTTTGTGTGCATGACTTT +
Preference number: 5 (lower is better)
Translates to: LKFTKEGHLAPRAVCQLPEEMFP*VCVHDF
Trigger: AAAGTCATGCACACAAACCAAAGGGAACATTTCTTC...AGGCAGCTGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp ATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTTCCCTGCATATATCATaGCTCTGTCACTGCCTGACT +
Preference number: 5 (lower is better)
Translates to: IHLSSNSPRRDTWHPGLCSLHIS*LCHCLT
Trigger: AGTCAGGCAGTGACAGAGCAATGATATATGCAGGGA...ACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTGGGCCTCTGTGGAGTTaGGGTGGTTCTGAGCAAGGC +
Preference number: 5 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNAGPLWS*GGSEQG
Trigger: GCCTTGCTCAGAACCACCCAAACTCCACAGAGGCCC...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TGGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCCGAATGCTGCCTGACTaGTGGATTTGCTTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: WAQCESISPQIHQGGTLGRMLPD*WICLSF
Trigger: AAAGGACAAGCAAATCCACAAGTCAGGCAGCATTCG...GCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGAGGCACTTAAGCATAAAATaGATGGGGTTGTCCAGTTTA +
Preference number: 5 (lower is better)
Translates to: CQLPLLKRSRSPEPRVWRHLSIK*MGLSSL
Trigger: TAAACTGGACAACCCCATCAATTTTATGCTTAAGTG...CCTCCACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGCACCCATTTTTCTACTaGGACGTTGAATTTCATGAA +
Preference number: 5 (lower is better)
Translates to: CVPAASSQEVKEPRAQSVHPFFY*DVEFHE
Trigger: TTCATGAAATTCAACGTCCAAGTAGAAAAATGGGTG...CACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp TCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGTCTGCACCTTCAATGTaGTGGGAGAGATTTCCATTT +
Preference number: 5 (lower is better)
Translates to: SISPQIHQGGTLGTQGCVSAPSM*WERFPF
Trigger: AAATGGAAATCTCTCCCACAACATTGAAGGTGCAGA...CACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp AGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGTTCCTCGATGAAGGTTaGCGAACGTCAGGTAACGTA +
Preference number: 5 (lower is better)
Translates to: SVNPSLLKFTKEGHLAPRFLDEG*RTSGNV
Trigger: TACGTTACCTGACGTTCGCAAACCTTCATCGAGGAA...CCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp TCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATTTAGGGTGATGTCAAAAATGTaGCTTCCAACAGAGCTGGAC +
Preference number: 5 (lower is better)
Translates to: SGAEGSWSWHGHSQMQFRVMSKM*LPTELD
Trigger: GTCCAGCTCTGTTGGAAGCAACATTTTTGACATCAC...CCTAAATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TGGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCGCTACCTTTGTCTTGTaGGTTCCATTAGTTCACCTC +
Preference number: 5 (lower is better)
Translates to: WAQCESISPQIHQGGTLGATFVL*VPLVHL
Trigger: GAGGTGAACTAATGGAACCAACAAGACAAAGGTAGC...GCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TCAGGTGCAGAGGGCAGCTGGAGTTGGCATGGGCATTCTCAGATGCAATTTAGGATGTGGGAACGGGGCTaGGAAATTTTGTCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: SGAEGSWSWHGHSQMQFRMWERG*EILSSQ
Trigger: TTGAGAAGACAAAATTTCCAAGCCCCGTTCCCACAT...CCTAAATTGCATCTGAGAATGCCCATGCCAACTCCAGCTGCCCTCTGCACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp GAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTTTTCGAGAACAGCTTCACTTaGTTTCTTCTGGAACACAGC +
Preference number: 5 (lower is better)
Translates to: EPRVWRDHSCCWCKIWLFENSFT*FLLEHS
Trigger: GCTGTGTTCCAGAAGAAACAAAGTGAAGCTGTTCTC...GAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TGTGTGCCAGCTGCCTCTTCTCAAGAGGTCAAGGAGCCCAGAGCCCAGAGTGTGGTATATATGTGTACTTaGTGTTCAGGGTTCAATAGC +
Preference number: 5 (lower is better)
Translates to: CVPAASSQEVKEPRAQSVVYMCT*CSGFNS
Trigger: GCTATTGAACCCTGAACACAAAGTACACATATATAC...CACACTCTGGGCTCTGGGCTCCTTGACCTCTTGAGAAGAGGCAGCTGGCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS TCA 90 bp GTTCTCATCCACATGACATTTCTTCTTGGCGATCTTGTGGAGAATTaGAGCCTTTTCTCTGAACCTCCCTTCGGCGAGTGGGTCAAGGGT +
Preference number: 5 (lower is better)
Translates to: VLIHMTFLLGDLVEN*SLFSEPPFGEWVKG
Trigger: ACCCTTGACCCACTCGCCGAAGGGAGGTTCAGAGAAAAGGCTTCAATTCTCCACAAGATCGCCAAGAAGAAATGTCATGTGGATGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286344.3
CDS CCA 90 bp TCCTCCTCCTCATCAGCGGTCTGGGCTTCTGCACCTTCAATGTTGTaGGAGAGATTTCCATTTTGTACAGGTTCTGAAGCATCACTGGAT +
Preference number: 5 (lower is better)
Translates to: SSSSSAVWASAPSML*ERFPFCTGSEASLD
Trigger: ATCCAGTGATGCTTCAGAACCTGTACAAAATGGAAATCTCTCCCACAACATTGAAGGTGCAGAAGCCCAGACCGCTGATGAGGAGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp CCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATGGCTATAACAAAGAGGATGTaGAATACTGCTGAACCTACA +
Preference number: 5 (lower is better)
Translates to: PRAQSVEGPFMLLVQDMAITKRM*NTAEPT
Trigger: TGTAGGTTCAGCAGTATTCAACATCCTCTTTGTTAT...AGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp CATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCCACCCATTTTTCTACTaGGACGTTGAATTTCATGAA +
Preference number: 5 (lower is better)
Translates to: HLSSNSPRRDTWHPGLCAHPFFY*DVEFHE
Trigger: TTCATGAAATTCAACGTCCAAGTAGAAAAATGGGTG...GGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp GCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCGGTGTGTATCATGAGTaGGAAGATGCTATTCCTCAT +
Preference number: 5 (lower is better)
Translates to: AQCESISPQIHQGGTLGTGVYHE*EDAIPH
Trigger: ATGAGGAATAGCATCTTCCAACTCATGATACACACC...GGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp GGGCCCAGTGTGAATCCATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACGGGGCTTGGAAATTTaGTCTTCTCAAATGCAACTT +
Preference number: 5 (lower is better)
Translates to: GPSVNPSLLKFTKEGHLARGLEI*SSQMQL
Trigger: AAGTTGCATTTGAGAAGACAAAATTTCCAAGCCCCG...TGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATGGATTCACACTGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp CATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCGGTGAAAAAGGAATATaGCCATGGTGTAATCATAAG +
Preference number: 5 (lower is better)
Translates to: HLSSNSPRRDTWHPGLCAGEKGI*PWCNHK
Trigger: CTTATGATTACACCATGGCAATATTCCTTTTTCACC...GGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp ATCTCTCCTCAAATTCACCAAGGAGGGACACTTGGCACCCAGGGCTGTGTGCCAATAACAAAGAGGATGTaGAATACTGCTGAACCTACA +
Preference number: 5 (lower is better)
Translates to: ISPQIHQGGTLGTQGCVPITKRM*NTAEPT
Trigger: TGTAGGTTCAGCAGTATTCAACATCCTCTTTGTTAT...TGGCACACAGCCCTGGGTGCCAAGTGTCCCTCCTTGGTGAATTTGAGGAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS GCA 90 bp TCATCCAAACACCATTTCTCTAGGGAAGTGATGGTGGTGCTTTGTTaGAGATCCATCCTGGGTCTTCTGGTGGATATGGTGATCTTCCAA +
Preference number: 5 (lower is better)
Translates to: SSKHHFSREVMVVLC*RSILGLLVDMVIFQ
Trigger: TTGGAAGATCACCATATCCACCAGAAGACCCAGGATGGATCTGCAACAAAGCACCACCATCACTTCCCTAGAGAAATGGTGTTTGGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp TGGTTGTTAATCATTGAGCTGGGTCACACCAGCATCTATGCTGGGATCTCCCCCTTTAAAGACCCATTGTaGAACTCTGTACACATCTCT +
Preference number: 5 (lower is better)
Translates to: WLLIIELGHTSIYAGISPFKDPL*NSVHIS
Trigger: AGAGATGTGTACAGAGTTCAACAATGGGTCTTTAAA...GGGGGAGATCCCAGCATAGATGCTGGTGTGACCCAGCTCAATGATTAACAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp AAGACCACAACACTTCCTGTGAAGTGGAGCTCCGAGACAAGCAAAGGGCACCATATGTTGGCGTCAACGTaGACAACATTTTCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: KTTTLPVKWSSETSKGHHMLAST*TTFSLF
Trigger: AAACAAAGAAAATGTTGTCAACGTTGACGCCAACAT...ATGGTGCCCTTTGCTTGTCTCGGAGCTCCACTTCACAGGAAGTGTTGTGGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS TCA 90 bp TGCACCTTCAATGTTGTGGGAGAGATTTCCATTTTGTACAGGTTCTaGAGCATCACTGGATGGTGTCATTTCAACATCTGTGCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: CTFNVVGEISILYRF*SITGWCHFNICAGA
Trigger: AGCACCAGCACAGATGTTGAAATGACACCATCCAGTGATGCTTCAGAACCTGTACAAAATGGAAATCTCTCCCACAACATTGAAGGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp GAGTATTTTGGAGAACTGTTAGTCTCCAAGGCCTTAGTTACTTATGGATCCATTAGTGATGGTGGTGCTTaGTTGCAGATCCATCCTGGG +
Preference number: 5 (lower is better)
Translates to: EYFGELLVSKALVTYGSISDGGA*LQIHPG
Trigger: CCCAGGATGGATCTGCAACAAAGCACCACCATCACT...AATGGATCCATAAGTAACTAAGGCCTTGGAGACTAACAGTTCTCCAAAATACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTTCCTTTTCCTTGACTTaGGCAAACTTGATGCTCCCT +
Preference number: 5 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNASFSLT*ANLMLP
Trigger: AGGGAGCATCAAGTTTGCCAAAGTCAAGGAAAAGGA...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TCTTTCTTAAGAAATCTGTCCCTAGCCATATTAAGGGCCTCTGTGGAGTTTGGGACCTTGACGACCTTATaGCGGTTTATCATTTGCTTC +
Preference number: 5 (lower is better)
Translates to: SFLRNLSLAILRASVEFGTLTTL*RFIICF
Trigger: GAAGCAAATGATAAACCGCAATAAGGTCGTCAAGGT...CCCAAACTCCACAGAGGCCCTTAATATGGCTAGGGACAGATTTCTTAAGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TTGGAAGTGCATCCACTGGATTTTTGTAGGGATGAGGATAGGGGTTACAATGCTCCATTAGTTCACCTCTaGTACTTAAGAGGTAAAGCC +
Preference number: 5 (lower is better)
Translates to: LEVHPLDFCRDEDRGYNAPLVHL*YLRGKA
Trigger: GGCTTTACCTCTTAAGTACAAGAGGTGAACTAATGG...AGCATTGTAACCCCTATCCTCATCCCTACAAAAATCCAGTGGATGCACTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS GCA 90 bp GCTTCTGGTGCTGTCACCTTGACGACCTTATTGCGGTTTATCATTTaGTTCACCCATTTTTCTACTTGGACGTTGAATTTCATGAAAACC +
Preference number: 5 (lower is better)
Translates to: ASGAVTLTTLLRFII*FTHFSTWTLNFMKT
Trigger: GGTTTTCATGAAATTCAACGTCCAAGTAGAAAAATGGGTGAAGCAAATGATAAACCGCAATAAGGTCGTCAAGGTGACAGCACCAGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS-3UTR CAA 90 bp TATGTTATAGAGCAAATGTCTATGTTGGCGTCAACGTTGACAACATTTTCTTTGAGAAACGTGACTTGCTaGCGGGTTTCAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: YVIEQMSMLASTLTTFSLRNVTC*RVSEGQ
Trigger: CTGGCCTTCTGAAACCCGCAAGCAAGTCACGTTTCT...CAAAGAAAATGTTGTCAACGTTGACGCCAACATAGACATTTGCTCTATAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp ATCTTTGGTGGAAGCCTAGGCAAACTCCATGGCATTCTTTCAGACTTAGATATTTGGTGTTTCAATGTCTaGGAAGGCATTGTCCCACAT +
Preference number: 5 (lower is better)
Translates to: IFGGSLGKLHGILSDLDIWCFNV*EGIVPH
Trigger: ATGTGGGACAATGCCTTCCAAGACATTGAAACACCA...AATATCTAAGTCTGAAAGAATGCCATGGAGTTTGCCTAGGCTTCCACCAAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TCTTTCTTAAGAAATCTGTCCCTAGCCATATTAAGGGCCTCTGTGGAGTTTGGGTTGGCTCTTGAATTGTaGATATCTTTTATACCCTGC +
Preference number: 5 (lower is better)
Translates to: SFLRNLSLAILRASVEFGLALEL*ISFIPC
Trigger: GCAGGGTATAAAAGATATCAACAATTCAAGAGCCAA...CCCAAACTCCACAGAGGCCCTTAATATGGCTAGGGACAGATTTCTTAAGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TCTTTCTTAAGAAATCTGTCCCTAGCCATATTAAGGGCCTCTGTGGAGTTTGGGCTCATGGACTGCTTATaGATTGACTATATTCAGAAG +
Preference number: 5 (lower is better)
Translates to: SFLRNLSLAILRASVEFGLMDCL*IDYIQK
Trigger: CTTCTGAATATAGTCAATCAATAAGCAGTCCATGAG...CCCAAACTCCACAGAGGCCCTTAATATGGCTAGGGACAGATTTCTTAAGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp GAAACAAGAAGAAACACCCTTTATCAGAATGAAGTCCATGTGACAGAAGTACATGAATATCACTGGCCCTaGGTTCAGATACCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: ETRRNTLYQNEVHVTEVHEYHWP*VQIPFL
Trigger: AAGAAAGGGTATCTGAACCAAGGGCCAGTGATATTC...ATGTACTTCTGTCACATGGACTTCATTCTGATAAAGGGTGTTTCTTCTTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp TATGTTATAGAGCAAATGTCTATGTTGGCGTCAACGTTGACAACATTTTCTTTGAGGAACAGGCAGGATTaGTGTGTTCATGTGCGTATA +
Preference number: 5 (lower is better)
Translates to: YVIEQMSMLASTLTTFSLRNRQD*CVHVRI
Trigger: TATACGCACATGAACACACAAATCCTGCCTGTTCCT...CAAAGAAAATGTTGTCAACGTTGACGCCAACATAGACATTTGCTCTATAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp GAAACAAGAAGAAACACCCTTTATCAGAATGAAGTCCATGTGACAGAAGTACATTCTTTGGTCAACTTTTaGTTAAAGTGGTCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: ETRRNTLYQNEVHVTEVHSLVNF*LKWSGG
Trigger: ACCCCCAGACCACTTTAACAAAAAGTTGACCAAAGA...ATGTACTTCTGTCACATGGACTTCATTCTGATAAAGGGTGTTTCTTCTTGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp GAGTATTTTGGAGAACTGTTAGTCTCCAAGGCCTTAGTTACTTATGGATCCATTAATGACAGAAGTAATTaGGAAGTGCATCCACTGGAT +
Preference number: 5 (lower is better)
Translates to: EYFGELLVSKALVTYGSINDRSN*EVHPLD
Trigger: ATCCAGTGGATGCACTTCCAAATTACTTCTGTCATT...AATGGATCCATAAGTAACTAAGGCCTTGGAGACTAACAGTTCTCCAAAATACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS-3UTR CAA 90 bp CATACTAGGTTAGAAATTGTGTATTTTAGCGGAGAGGAGGAAAATAACCACCAACCAGGTGTCTTTTCTTaGGTCAACTTTTTGTTAAAG +
Preference number: 5 (lower is better)
Translates to: HTRLEIVYFSGEEENNHQPGVFS*VNFLLK
Trigger: CTTTAACAAAAAGTTGACCAAAGAAAAGACACCTGG...TTGGTGGTTATTTTCCTCCTCTCCGCTAAAATACACAATTTCTAACCTAGTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS CCA 72 bp AGACTGTTGTGGAGGGAGGCAGAGCTTCCACCTCGCTaGAGACGCGGCTTAGCCGGTAGAGTTGGTTCATCC +
Preference number: 6 (lower is better)
Translates to: RLLWREAELPPR*RRGLAGRVGSS
Trigger: GGATGAACCAACTCTACCGGCTAAGCCGCGTCTCCAGCGAGGTGGAAGCTCTGCCTCCCTCCACAACAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS CAA 72 bp TGGAGACGCGGCTTAGCCGGTAGAGTTGGTTCATCCTaGTCCCTGGCTGCAGATGGCTTTGCTTGGGCTTCT +
Preference number: 6 (lower is better)
Translates to: WRRGLAGRVGSS*SLAADGFAWAS
Trigger: AGAAGCCCAAGCAAAGCCATCTGCAGCCAGGGACAAGGATGAACCAACTCTACCGGCTAAGCCGCGTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS GCA 72 bp GAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTGGTaGAAGATATGGCTTTTCCTGCTAGATGGAGACGGG +
Preference number: 6 (lower is better)
Translates to: EPRVWRDHSCCW*KIWLFLLDGDG
Trigger: CCCGTCTCCATCTAGCAGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS GCA 72 bp AGCCCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTaGTGGTGCAAGATATGGCTTTTCCTGCTAGATGGA +
Preference number: 6 (lower is better)
Translates to: SPEPRVWRDHSC*WCKIWLFLLDG
Trigger: TCCATCTAGCAGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS CCA 72 bp CCAGAGCCCAGAGTGTGGAGGGACCATTCATGCTGCTaGTGCAAGATATGGCTTTTCCTGCTAGATGGAGAC +
Preference number: 6 (lower is better)
Translates to: PEPRVWRDHSCC*CKIWLFLLDGD
Trigger: GTCTCCATCTAGCAGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACACTCTGGGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS GCA 72 bp GTCCCTGGCTGCAGATGGCTTTGCTTGGGCTTCTGGTaGTGTCACCTTGACGACCTTATTGCGGTTTATCAT +
Preference number: 6 (lower is better)
Translates to: VPGCRWLCLGFW*CHLDDLIAVYH
Trigger: ATGATAAACCGCAATAAGGTCGTCAAGGTGACAGCACCAGAAGCCCAAGCAAAGCCATCTGCAGCCAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS CCA 72 bp GTGTGGAGGGACCATTCATGCTGCTGGTGCAAGATATaGCTTTTCCTGCTAGATGGAGACGGGGCATGTAAG +
Preference number: 6 (lower is better)
Translates to: VWRDHSCCWCKI*LFLLDGDGACK
Trigger: CTTACATGCCCCGTCTCCATCTAGCAGGAAAAGCCATATCTTGCACCAGCAGCATGAATGGTCCCTCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS CAA 90 bp TCTGAACCTCCCTTCGGCGAGTGGGTCAAGGGTGTGTATCATGAGTaGGAAGATGCTATTCCTCATGAGACTGTTGTGGAGGGAGGCAGA +
Preference number: 6 (lower is better)
Translates to: SEPPFGEWVKGVYHE*EDAIPHETVVEGGR
Trigger: TCTGCCTCCCTCCACAACAGTCTCATGAGGAATAGCATCTTCCAACTCATGATACACACCCTTGACCCACTCGCCGAAGGGAGGTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286344.3
CDS GCA 72 bp CTGGTGCGCCCACCAGACCATCAAGTAAGAGAATACTaGAATCCAGGTAATGGAGCCAAAGAACGTGATGGG +
Preference number: 6 (lower is better)
Translates to: LVRPPDHQVREY*NPGNGAKERDG
Trigger: CCCATCACGTTCTTTGGCTCCATTACCTGGATTGCAGTATTCTCTTACTTGATGGTCTGGTGGGCGCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS CCA 72 bp CCTTCGGCGAGTGGGTCAAGGGTGTGTATCATGAGTTaGAAGATGCTATTCCTCATGAGACTGTTGTGGAGG +
Preference number: 6 (lower is better)
Translates to: PSASGSRVCIMS*KMLFLMRLLWR
Trigger: CCTCCACAACAGTCTCATGAGGAATAGCATCTTCCAACTCATGATACACACCCTTGACCCACTCGCCGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286344.3
CDS CAA 72 bp CCCTTCGGCGAGTGGGTCAAGGGTGTGTATCATGAGTaGGAAGATGCTATTCCTCATGAGACTGTTGTGGAG +
Preference number: 6 (lower is better)
Translates to: PFGEWVKGVYHE*EDAIPHETVVE
Trigger: CTCCACAACAGTCTCATGAGGAATAGCATCTTCCAACTCATGATACACACCCTTGACCCACTCGCCGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286344.3
CDS TCA 72 bp CAGATGGCTTTGCTTGGGCTTCTGGTGCTGTCACCTTaGCGACCTTATTGCGGTTTATCATTTGCTTCACCC +
Preference number: 6 (lower is better)
Translates to: QMALLGLLVLSP*RPYCGLSFASP
Trigger: GGGTGAAGCAAATGATAAACCGCAATAAGGTCGTCAAGGTGACAGCACCAGAAGCCCAAGCAAAGCCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS GCA 72 bp CACCATTTCTCTAGGGAAGTGATGGTGGTGCTTTGTTaGAGATCCATCCTGGGTCTTCTGGTGGATATGGTG +
Preference number: 6 (lower is better)
Translates to: HHFSREVMVVLC*RSILGLLVDMV
Trigger: CACCATATCCACCAGAAGACCCAGGATGGATCTGCAACAAAGCACCACCATCACTTCCCTAGAGAAATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS CCA 72 bp TCTTCGGCGAGTGGGTCAAGGGTGTGTATCATGAGTTaGAAGATGCTATTCCTCATGAGACTGTTGTGGAGG +
Preference number: 6 (lower is better)
Translates to: SSASGSRVCIMS*KMLFLMRLLWR
Trigger: CCTCCACAACAGTCTCATGAGGAATAGCATCTTCCAACTCATGATACACACCCTTGACCCACTCGCCGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS CAA 72 bp CTCCTCAAGGGAAAAGATGTCTTTCGGGTAGTCTCCTaGGGCGTGATCTGTACTATTCTCAGACTCGCCTTC +
Preference number: 6 (lower is better)
Translates to: LLKGKDVFRVVS*GVICTILRLAF
Trigger: GAAGGCGAGTCTGAGAATAGTACAGATCACGCCCAAGGAGACTACCCGAAAGACATCTTTTCCCTTGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS CAA 72 bp GCAGATGGCTTTGCTTGGGCTTCTGGTGCTGTCACCTaGACGACCTTATTGCGGTTTATCATTTGCTTCACC +
Preference number: 6 (lower is better)
Translates to: ADGFAWASGAVT*TTLLRFIICFT
Trigger: GGTGAAGCAAATGATAAACCGCAATAAGGTCGTCAAGGTGACAGCACCAGAAGCCCAAGCAAAGCCATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS CAA 90 bp TCCCTGGCTGCAGATGGCTTTGCTTGGGCTTCTGGTGCTGTCACCTaGACGACCTTATTGCGGTTTATCATTTGCTTCACCCATTTTTCT +
Preference number: 6 (lower is better)
Translates to: SLAADGFAWASGAVT*TTLLRFIICFTHFS
Trigger: AGAAAAATGGGTGAAGCAAATGATAAACCGCAATAAGGTCGTCAAGGTGACAGCACCAGAAGCCCAAGCAAAGCCATCTGCAGCCAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS TCA 72 bp ACAGTGACTCATCCAAACACCATTTCTCTAGGGAAGTaGTGGTGGTGCTTTGTTGCAGATCCATCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: TVTHPNTISLGK*WWCFVADPSWV
Trigger: GACCCAGGATGGATCTGCAACAAAGCACCACCATCACTTCCCTAGAGAAATGGTGTTTGGATGAGTCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS TCA 72 bp CACATGACATTTCTTCTTGGCGATCTTGTGGAGAATTaGAGCCTTTTCTCTGAACCTCCCTTCGGCGAGTGG +
Preference number: 6 (lower is better)
Translates to: HMTFLLGDLVEN*SLFSEPPFGEW
Trigger: CCACTCGCCGAAGGGAGGTTCAGAGAAAAGGCTTCAATTCTCCACAAGATCGCCAAGAAGAAATGTCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286344.3
CDS CAA 72 bp TTCTTCGGCGAGTGGGTCAAGGGTGTGTATCATGAGTaGGAAGATGCTATTCCTCATGAGACTGTTGTGGAG +
Preference number: 6 (lower is better)
Translates to: FFGEWVKGVYHE*EDAIPHETVVE
Trigger: CTCCACAACAGTCTCATGAGGAATAGCATCTTCCAACTCATGATACACACCCTTGACCCACTCGCCGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341998.6
CDS CAA 90 bp GATGGCTTTGCTTGGGCTTCTGGTGCTGTCACCTTGACGACCTTATaGCGGTTTATCATTTGCTTCACCCATTTTTCTACTTGGACGTTG +
Preference number: 6 (lower is better)
Translates to: DGFAWASGAVTLTTL*RFIICFTHFSTWTL
Trigger: CAACGTCCAAGTAGAAAAATGGGTGAAGCAAATGATAAACCGCAATAAGGTCGTCAAGGTGACAGCACCAGAAGCCCAAGCAAAGCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS CAA 72 bp TCCTCATCAGCGGTCTGGGCTTCTGCACCTTCAATGTaGTGGGAGAGATTTCCATTTTGTACAGGTTCTGAA +
Preference number: 6 (lower is better)
Translates to: SSSAVWASAPSM*WERFPFCTGSE
Trigger: TTCAGAACCTGTACAAAATGGAAATCTCTCCCACAACATTGAAGGTGCAGAAGCCCAGACCGCTGATGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS CAA 90 bp TTTTCTTCTCTCCTCAAGGGAAAAGATGTCTTTCGGGTAGTCTCCTaGGGCGTGATCTGTACTATTCTCAGACTCGCCTTCCTTAGAAAG +
Preference number: 6 (lower is better)
Translates to: FSSLLKGKDVFRVVS*GVICTILRLAFLRK
Trigger: CTTTCTAAGGAAGGCGAGTCTGAGAATAGTACAGATCACGCCCAAGGAGACTACCCGAAAGACATCTTTTCCCTTGAGGAGAGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS TCA 72 bp GTTGCAGATCCATCCTGGGTCTTCTGGTGGATATGGTaGTCTTCCAACTTTAGACTCAACCAGATGGTTCTT +
Preference number: 6 (lower is better)
Translates to: VADPSWVFWWIW*SSNFRLNQMVL
Trigger: AAGAACCATCTGGTTGAGTCTAAAGTTGGAAGATCACCATATCCACCAGAAGACCCAGGATGGATCTGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS CAA 72 bp GCTTGGGCTTCTGGTGCTGTCACCTTGACGACCTTATaGCGGTTTATCATTTGCTTCACCCATTTTTCTACT +
Preference number: 6 (lower is better)
Translates to: AWASGAVTLTTL*RFIICFTHFST
Trigger: AGTAGAAAAATGGGTGAAGCAAATGATAAACCGCAATAAGGTCGTCAAGGTGACAGCACCAGAAGCCCAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS TCA 72 bp GCTGAACCTACAATTGTGCCTATGCCAACGTTGCTGTaGGCGATAAATACCCCTATGAGAGATGTGAAAAGT +
Preference number: 6 (lower is better)
Translates to: AEPTIVPMPTLL*AINTPMRDVKS
Trigger: ACTTTTCACATCTCTCATAGGGGTATTTATCGCTCACAGCAACGTTGGCATAGGCACAATTGTAGGTTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS CAA 90 bp GGCTTCTGGTGCTGTCACCTTGACGACCTTATTGCGGTTTATCATTaGCTTCACCCATTTTTCTACTTGGACGTTGAATTTCATGAAAAC +
Preference number: 6 (lower is better)
Translates to: GFWCCHLDDLIAVYH*LHPFFYLDVEFHEN
Trigger: GTTTTCATGAAATTCAACGTCCAAGTAGAAAAATGGGTGAAGCAAATGATAAACCGCAATAAGGTCGTCAAGGTGACAGCACCAGAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS GCA 72 bp GCTGTCACCTTGACGACCTTATTGCGGTTTATCATTTaGTTCACCCATTTTTCTACTTGGACGTTGAATTTC +
Preference number: 6 (lower is better)
Translates to: AVTLTTLLRFII*FTHFSTWTLNF
Trigger: GAAATTCAACGTCCAAGTAGAAAAATGGGTGAAGCAAATGATAAACCGCAATAAGGTCGTCAAGGTGACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS CAA 72 bp GAAAACAGAGCACACATGCCAATAACAAAGAGGATGTaGAATACTGCTGAACCTACAATTGTGCCTATGCCA +
Preference number: 6 (lower is better)
Translates to: ENRAHMPITKRM*NTAEPTIVPMP
Trigger: TGGCATAGGCACAATTGTAGGTTCAGCAGTATTCAACATCCTCTTTGTTATTGGCATGTGTGCTCTGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6
CDS TCA 72 bp AATGTTGTGGGAGAGATTTCCATTTTGTACAGGTTCTaGAGCATCACTGGATGGTGTCATTTCAACATCTGT +
Preference number: 6 (lower is better)
Translates to: NVVGEISILYRF*SITGWCHFNIC
Trigger: ACAGATGTTGAAATGACACCATCCAGTGATGCTTCAGAACCTGTACAAAATGGAAATCTCTCCCACAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286344.3
ENST00000341998.6