RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC24A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000074621

Ensembl transcript IDs: ENST00000261892.11, ENST00000339868.10, ENST00000399033.8, ENST00000434116.6, ENST00000449142.2, ENST00000505666.2, ENST00000535950.1, ENST00000537259.5, ENST00000539516.1, ENST00000544319.6, ENST00000546330.1

Found 713 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGATGTAGACCACATCTGCATCTTTTGGGCCAGCAGCCTTTGGAATaGTCAGGGAACAGTGAGCGTAGGAGCTTGTCTTATAGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: RCRPHLHLLGQQPLE*SGNSERRSLSYSCC
Trigger: GCAGCAGCTATAAGACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAAGATGCAGATGTGGTCTACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR GCA 90 bp ACTTCCCTTCCCACTCCACTCAACTGTCATTGTTGGGTGAGAACATaGTGGAGGGTGGAGCCAGGACATTCCATTAGAATGTCTAATCCC +
Preference number: 1 (lower is better)
Translates to: TSLPTPLNCHCWVRT*WRVEPGHSIRMSNP
Trigger: GGGATTAGACATTCTAATGGAATGTCCTGGCTCCACCCTCCAGCATGTTCTCACCCAACAATGACAGTTGAGTGGAGTGGGAAGGGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
3UTR CCA 90 bp ACCTCCCTCCCACAAGCATTGCCTTCTCCTCCTGTTCTTAGGCCTTaGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATAAGGATA +
Preference number: 1 (lower is better)
Translates to: TSLPQALPSPPVLRP*LWKPSNAVASGIRI
Trigger: TATCCTTATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGGAGGAGAAGGCAATGCTTGTGGGAGGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR CCA 90 bp CTCCCACAAGCATTGCCTTCTCCTCCTGTTCTTAGGCCTTGGCTATaGAAACCCAGCAATGCAGTAGCATCAGGAATAAGGATAATTAAG +
Preference number: 1 (lower is better)
Translates to: LPQALPSPPVLRPWL*KPSNAVASGIRIIK
Trigger: CTTAATTATCCTTATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGGAGGAGAAGGCAATGCTTGTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR TCA 90 bp AGCCAGGACATTCCATTAGAATGTCTAATCCCTCAAGGTGACCACTaGTGGAGACAACATGAATTTGCATGTTCTAATAAATACATACTT +
Preference number: 1 (lower is better)
Translates to: SQDIPLECLIPQGDH*WRQHEFACSNKYIL
Trigger: AAGTATGTATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGATTAGACATTCTAATGGAATGTCCTGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
3UTR-3UTR TCA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTCTTGAACCGGGGAGGTaGAGGTTGTGGTGTGCCGAG +
Preference number: 2 (lower is better)
Translates to: LRSITPYSSLRKNVRSQALEPGR*RLWCAE
Trigger: CTCGGCACACCACAACCTTCACCTCCCCGGTTCAAG...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CCA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTTGGGCCAGCAGCCTTTaGAATGATCAGGGAACAGTG +
Preference number: 2 (lower is better)
Translates to: LRSITPYSSLRKNVRSQAWASSL*NDQGTV
Trigger: CACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCA...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR TCA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTTCTGCATGGTCTTCTaGTCCATGCCCATTGTGAGC +
Preference number: 2 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGFCMVF*SMPIVS
Trigger: GCTCACAATGGGCATGGATCAGAAGACCATGCAGAA...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR TCA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTTGGACTCTTTAGAATaGCTTCCCTTCCCACTCCAC +
Preference number: 2 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGLDSLE*LPFPLH
Trigger: GTGGAGTGGGAAGGGAAGTCATTCTAAAGAGTCCAA...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CCA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCCTCAACTGTCATTGTTaGGTGAGAACATGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGLNCHC*VRTCWR
Trigger: CCTCCAGCATGTTCTCACCCAACAATGACAGTTGAG...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CCA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCCTTAGGCCTTGGCTATaGAAACCCAGCAATGCAGTA +
Preference number: 2 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGLRPWL*KPSNAV
Trigger: TACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAG...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CCA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCCCTGTTCTTAGGCCTTaGCTATGGAAACCCAGCAAT +
Preference number: 2 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGPVLRP*LWKPSN
Trigger: ATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CCA 90 bp CAGCATTTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGAATTTTGGTATTaGGACCTCCCTCCCACAAGC +
Preference number: 2 (lower is better)
Translates to: QHFTVHHSLLQSEEERQIPEFWY*DLPPTS
Trigger: GCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGG...GATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAAATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR TCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCCCTCAAGGTGACCACTaGTGGAGACAACATGAATTT +
Preference number: 2 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLPQGDH*WRQHEF
Trigger: AAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGG...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR TCA 90 bp CAGCATTTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCTCTAATCCCTCAAGGTaGCCACTGATGGAGACAACA +
Preference number: 2 (lower is better)
Translates to: QHFTVHHSLLQSEEERQISNPSR*PLMETT
Trigger: TGTTGTCTCCATCAGTGGTCACCTTGAGGGATTAGA...GATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAAATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR TCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATCTTGAACCGGGGAGGTaGAGGTTGTGGTGTGCCGAG +
Preference number: 2 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDLEPGR*RLWCAE
Trigger: CTCGGCACACCACAACCTTCACCTCCCCGGTTCAAG...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR GCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTGCCTATCCCAACCTTTaGCCCCAGTTATCTCATTTA +
Preference number: 2 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTAYPNL*PQLSHL
Trigger: TAAATGAGATAACTGGGGGCAAAGGTTGGGATAGGC...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR TCA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCTTCTGCATGGTCTTCTaGTCCATGCCCATTGTGAGC +
Preference number: 2 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVFCMVF*SMPIVS
Trigger: GCTCACAATGGGCATGGATCAGAAGACCATGCAGAA...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR TCA 90 bp CAGCATTTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCATTATTTCCAAAGAATaGGAATCCTGGGGTAGCGAG +
Preference number: 2 (lower is better)
Translates to: QHFTVHHSLLQSEEERQIIISKE*ESWGSE
Trigger: CTCGCTACCCCAGGATTCTCATTCTTTGGAAATAAT...GATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAAATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR GCA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCAGGAGGAGACAAAATTaGAGCGTGTGTTTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVRRRQN*SVCLGQ
Trigger: CTGCCCCAAACACACGCTGCAATTTTGTCTCCTCCT...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR GCA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCTTGTCTTATAGCTGCTaGGCCTATCCCAACCTTTGC +
Preference number: 2 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVLSYSC*AYPNLC
Trigger: GCAAAGGTTGGGATAGGCGCAGCAGCTATAAGACAA...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR GCA 90 bp CAGCATTTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCTTTACCATCATAATCTaGAGTCACCCGAGCTCATTT +
Preference number: 2 (lower is better)
Translates to: QHFTVHHSLLQSEEERQIFTIII*SHPSSF
Trigger: AAATGAGCTCGGGTGACTGCAGATTATGATGGTAAA...GATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATTGGGTGAGAACATGCTaGAGGGTGGAGCCAGGACAT +
Preference number: 2 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDWVRTC*RVEPGH
Trigger: ATGTCCTGGCTCCACCCTCCAGCATGTTCTCACCCA...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
3UTR-3UTR CCA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTAAAAGATGGAATACTTaGAACACCTTAGCCATCATT +
Preference number: 2 (lower is better)
Translates to: LRSITPYSSLRKNVRSQAKRWNT*NTLAII
Trigger: AATGATGGCTAAGGTGTTCCAAGTATTCCATCTTTT...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR GCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATAGCTTGTCTTATAGCTaGTGCGCCTATCCCAACCTT +
Preference number: 2 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHSLSYS*CAYPNL
Trigger: AAGGTTGGGATAGGCGCAGCAGCTATAAGACAAGCT...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR GCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATAGGAGGAGACAAAATTaGAGCGTGTGTTTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDRRRQN*SVCLGQ
Trigger: CTGCCCCAAACACACGCTGCAATTTTGTCTCCTCCT...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATACAGTAACTTCTGCATaGTCTTCTGATCCATGCCCA +
Preference number: 2 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHTVTSA*SSDPCP
Trigger: TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGT...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CCA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAATGGGCCAGCAGCCTTTaGAATGATCAGGGAACAGTG +
Preference number: 2 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKWASSL*NDQGTV
Trigger: CACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCA...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR GCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATAGCTTGTCTTATAGCTaGTGCGCCTATCCCAACCTT +
Preference number: 2 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDSLSYS*CAYPNL
Trigger: AAGGTTGGGATAGGCGCAGCAGCTATAAGACAAGCT...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATCTCAACTGTCATTGTTaGGTGAGAACATGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDLNCHC*VRTCWR
Trigger: CCTCCAGCATGTTCTCACCCAACAATGACAGTTGAG...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
3UTR-3UTR TCA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGAGACTCACCAATAACTaGAGCTACAGTGATTACAAA +
Preference number: 2 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMRLTNN*SYSDYK
Trigger: TTTGTAATCACTGTAGCTTCAGTTATTGGTGAGTCT...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR GCA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCGCCTATCCCAACCTTTaGCCCCAGTTATCTCATTTA +
Preference number: 2 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITAYPNL*PQLSHL
Trigger: TAAATGAGATAACTGGGGGCAAAGGTTGGGATAGGC...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CCA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCACAGTAACTTCTGCATaGTCTTCTGATCCATGCCCA +
Preference number: 2 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITTVTSA*SSDPCP
Trigger: TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGT...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR CAA 90 bp AGCAATGCAGTAGCATCAGGAATAAGGATAATTAAGAATATAGAATaGGAACATGATTCCATACTCTTCATCAGTCTTCTCGGGAGGATT +
Preference number: 2 (lower is better)
Translates to: SNAVASGIRIIKNIE*EHDSILFISLLGRI
Trigger: AATCCTCCCGAGAAGACTGATGAAGAGTATGGAATCATGTTCCAATTCTATATTCTTAATTATCCTTATTCCTGATGCTACTGCATTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CAA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCGCCGAGATCACGCCATaGCACACCAGCCTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLAEITP*HTSLGN
Trigger: GTTGCCCAGGCTGGTGTGCAATGGCGTGATCTCGGC...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR GCA 72 bp GGGAACAGTGAGCGTAGGAGCTTGTCTTATAGCTGCTaGGCCTATCCCAACCTTTGCCCCCAGTTATCTCAT +
Preference number: 3 (lower is better)
Translates to: GNSERRSLSYSC*AYPNLCPQLSH
Trigger: ATGAGATAACTGGGGGCAAAGGTTGGGATAGGCGCAGCAGCTATAAGACAAGCTCCTACGCTCACTGTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR GCA 72 bp TCAGGGAACAGTGAGCGTAGGAGCTTGTCTTATAGCTaGTGCGCCTATCCCAACCTTTGCCCCCAGTTATCT +
Preference number: 3 (lower is better)
Translates to: SGNSERRSLSYS*CAYPNLCPQLS
Trigger: AGATAACTGGGGGCAAAGGTTGGGATAGGCGCAGCAGCTATAAGACAAGCTCCTACGCTCACTGTTCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR CCA 72 bp ATGACTTCCCTTCCCACTCCACTCAACTGTCATTGTTaGGTGAGAACATGCTGGAGGGTGGAGCCAGGACAT +
Preference number: 3 (lower is better)
Translates to: MTSLPTPLNCHC*VRTCWRVEPGH
Trigger: ATGTCCTGGCTCCACCCTCCAGCATGTTCTCACCCAACAATGACAGTTGAGTGGAGTGGGAAGGGAAGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
3UTR-3UTR CAA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCAGGCAGGAGAATTGCTaGAACCGGGGAGGTGAAGGT +
Preference number: 3 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLRQENC*NRGGEG
Trigger: ACCTTCACCTCCCCGGTTCAAGCAATTCTCCTGCCT...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CAA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTCGCCTATCCCAACCTTaGCCCCCAGTTATCTCATTT +
Preference number: 3 (lower is better)
Translates to: FWASSLWNDQGTVSVGACRLSQP*PPVISF
Trigger: AAATGAGATAACTGGGGGCAAAGGTTGGGATAGGCG...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CAA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCCCACATCTGCATCTTTaGGGCCAGCAGCCTTTGGAA +
Preference number: 3 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLPHLHL*GQQPLE
Trigger: TTCCAAAGGCTGCTGGCCCAAAAGATGCAGATGTGG...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR CCA 72 bp GTAGACCACATCTGCATCTTTTGGGCCAGCAGCCTTTaGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGT +
Preference number: 3 (lower is better)
Translates to: VDHICIFWASSL*NDQGTVSVGAC
Trigger: ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAAGATGCAGATGTGGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CAA 90 bp CAGCATTTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCACATCTGCATCTTTaGGGCCAGCAGCCTTTGGAA +
Preference number: 3 (lower is better)
Translates to: QHFTVHHSLLQSEEERQIPHLHL*GQQPLE
Trigger: TTCCAAAGGCTGCTGGCCCAAAAGATGCAGATGTGG...GATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAAATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR TCA 72 bp CCACATCTGCATCTTTTGGGCCAGCAGCCTTTGGAATaGTCAGGGAACAGTGAGCGTAGGAGCTTGTCTTAT +
Preference number: 3 (lower is better)
Translates to: PHLHLLGQQPLE*SGNSERRSLSY
Trigger: ATAAGACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAAGATGCAGATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR CCA 72 bp GCATTGCCTTCTCCTCCTGTTCTTAGGCCTTGGCTATaGAAACCCAGCAATGCAGTAGCATCAGGAATAAGG +
Preference number: 3 (lower is better)
Translates to: ALPSPPVLRPWL*KPSNAVASGIR
Trigger: CCTTATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGGAGGAGAAGGCAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CAA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCTCCACTCAACTGTCATaGTTGGGTGAGAACATGCTG +
Preference number: 3 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLSTQLS*LGENML
Trigger: CAGCATGTTCTCACCCAACAATGACAGTTGAGTGGA...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CAA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGAGTGAGCGTAGGAGCTaGTCTTATAGCTGCTGCGCC +
Preference number: 3 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVSERRS*SYSCCA
Trigger: GGCGCAGCAGCTATAAGACAAGCTCCTACGCTCACT...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CAA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGAATTGCAGCGTGTGTTaGGGGCAGAGGTCAGGAAGG +
Preference number: 3 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMNCSVC*GQRSGR
Trigger: CCTTCCTGACCTCTGCCCCAAACACACGCTGCAATT...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CAA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTTTACACTAGCTACCTaGGAAGTAGTACTGCACTTT +
Preference number: 3 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGFTLAT*EVVLHF
Trigger: AAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAA...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CAA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGCGCCTATCCCAACCTTaGCCCCCAGTTATCTCATTT +
Preference number: 3 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLRLSQP*PPVISF
Trigger: AAATGAGATAACTGGGGGCAAAGGTTGGGATAGGCG...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CAA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCACTTTTCTCACCATGTaGTCATTGTGTTATGCATTC +
Preference number: 3 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGTFLTM*SLCYAF
Trigger: GAATGCATAACACAATGACAACATGGTGAGAAAAGT...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CAA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATAGGCAGGAGAATTGCTaGAACCGGGGAGGTGAAGGT +
Preference number: 3 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDRQENC*NRGGEG
Trigger: ACCTTCACCTCCCCGGTTCAAGCAATTCTCCTGCCT...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CAA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCACTTTTCTCACCATGTaGTCATTGTGTTATGCATTC +
Preference number: 3 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLTFLTM*SLCYAF
Trigger: GAATGCATAACACAATGACAACATGGTGAGAAAAGT...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CAA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATAAACGTGTCCCTTAACTaGATTCTAGTAAAAGCAGCA +
Preference number: 3 (lower is better)
Translates to: PVLRPWLWKPSNAVASGINVSLN*ILVKAA
Trigger: TGCTGCTTTTACTAGAATCAAGTTAAGGGACACGTT...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR TCA 72 bp CTCTTCATCAGTCTTCTCGGGAGGATTCTGACCAAATaGCCTAAAGATAAGGATGAGCCCATCCATGTTGTA +
Preference number: 3 (lower is better)
Translates to: LFISLLGRILTK*PKDKDEPIHVV
Trigger: TACAACATGGATGGGCTCATCCTTATCTTTAGGTCATTTGGTCAGAATCCTCCCGAGAAGACTGATGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR TCA 72 bp ATTCCATACTCTTCATCAGTCTTCTCGGGAGGATTCTaGCCAAATGACCTAAAGATAAGGATGAGCCCATCC +
Preference number: 3 (lower is better)
Translates to: IPYSSSVFSGGF*PNDLKIRMSPS
Trigger: GGATGGGCTCATCCTTATCTTTAGGTCATTTGGTCAGAATCCTCCCGAGAAGACTGATGAAGAGTATGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CAA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATAAGGAGGAGACAAAATaGCAGCGTGTGTTTGGGGCA +
Preference number: 3 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDKEETK*QRVFGA
Trigger: TGCCCCAAACACACGCTGCAATTTTGTCTCCTCCTT...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR-3UTR CAA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCAAGGAGGAGACAAAATaGCAGCGTGTGTTTGGGGCA +
Preference number: 3 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITKEETK*QRVFGA
Trigger: TGCCCCAAACACACGCTGCAATTTTGTCTCCTCCTT...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR GCA 72 bp TTTACCATCATAATCTGCAGTCACCCGAGCTCATTTTaGTCTGAAGCCAGTGATATTAAGCTGTTCTATTTC +
Preference number: 3 (lower is better)
Translates to: FTIIICSHPSSF*SEASDIKLFYF
Trigger: GAAATAGAACAGCTTAATATCACTGGCTTCAGAGCAAAATGAGCTCGGGTGACTGCAGATTATGATGGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR TCA 72 bp ATTCCATTAGAATGTCTAATCCCTCAAGGTGACCACTaGTGGAGACAACATGAATTTGCATGTTCTAATAAA +
Preference number: 3 (lower is better)
Translates to: IPLECLIPQGDH*WRQHEFACSNK
Trigger: TTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGATTAGACATTCTAATGGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR GCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCAGGACCACCCAGCCCTaGCGCCGCTCCTCCACACTG +
Preference number: 4 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLRTTQP*RRSSTL
Trigger: CAGTGTGGAGGAGCGGCGGCAGGGCTGGGTGGTCCT...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTGACTGCTGCCCACAATaGGGAAAGGCCCCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LRSITPYSSLRKNVRSQADCCPQ*GKAPGS
Trigger: AGACCCCGGGGCCTTTCCTCATTGTGGGCAGCAGTC...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCGACTGCTGCCCACAATaGGGAAAGGCCCCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGDCCPQ*GKAPGS
Trigger: AGACCCCGGGGCCTTTCCTCATTGTGGGCAGCAGTC...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCGCTGGGAGGCAGCACTaGGGGACTAGGACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGAGRQH*GTRTEL
Trigger: GAGCTCAGTCCTAGTCCCTCAGTGCTGCCTCCCAGC...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTGTCTGGAACAGGGGCTaGTGTGACCGTGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACVWNRG*CDRDRR
Trigger: CCTGCGGTCACGGTCACACCAGCCCCTGTTCCAGAC...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTGGTCTTCTAAGGCCATaGCCTTGGCCACTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LRSITPYSSLRKNVRSQAGLLRP*PWPLAS
Trigger: GGAGGCCAGTGGCCAAGGTCATGGCCTTAGAAGACC...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCCCAGGCTGTGGAGCATaGGCTGGTAGATGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGPGCGA*AGRWCC
Trigger: GCAGCACCATCTACCAGCTCATGCTCCACAGCCTGG...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGCTTGAACCGGGGAGGTaGAGGTTGTGGTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQLEPGR*RLWCAE
Trigger: CTCGGCACACCACAACCTTCACCTCCCCGGTTCAAG...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCATCCCAGGCTGTGGGTaGGGTGACATCCCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LLPPCNRCLHESGVETPPIPGCG*GDIPEA
Trigger: AGCCTCGGGGATGTCACCTCACCCACAGCCTGGGAT...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTGCTCATCCACCGCAATaGCCCCATCGCCCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTAHPPQ*PHRPAC
Trigger: GCAAGCCGGGCGATGGGGCCATTGCGGTGGATGAGC...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTAGGAGGCGACTCCAATaGAGCCGCTTTGTCCGGAGT +
Preference number: 4 (lower is better)
Translates to: LRSITPYSSLRKNVRSQARRRLQ*SRFVRS
Trigger: ACTCCGGACAAAGCGGCTTCATTGGAGTCGCCTCCT...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CAGCATTTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCACTGGCCTCCTGCTaGGCTGCTCCTTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: QHFTVHHSLLQSEEERQIPLASC*AAPSPR
Trigger: TCTGGGTGAAGGAGCAGCTCAGCAGGAGGCCAGTGG...GATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAAATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCGGTCTTCTAAGGCCATaGCCTTGGCCACTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLGLLRP*PWPLAS
Trigger: GGAGGCCAGTGGCCAAGGTCATGGCCTTAGAAGACC...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCCAGGCTGTGGAGCATaGGCTGGTAGATGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLPPCNRCLHESGVETPPPGCGA*AGRWCC
Trigger: GCAGCACCATCTACCAGCTCATGCTCCACAGCCTGG...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTTGAACCGGGGAGGTaGAGGTTGTGGTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: LLPPCNRCLHESGVETPPLEPGR*RLWCAE
Trigger: CTCGGCACACCACAACCTTCACCTCCCCGGTTCAAG...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTGTGCTTATTGTCACCTaGCCCTCAGAGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACVLIVT*PSEVAG
Trigger: CCCAGCCACCTCTGAGGGGCAGGTGACAATAAGCAC...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGCCGAGATCACGCCATTaGACACCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQPRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGTGTGCAATGGCGTGATCTCGG...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTCTAACGGGAACGGGCTaGAGACACCAGGTTAGTGCC +
Preference number: 4 (lower is better)
Translates to: LRSITPYSSLRKNVRSQALTGTG*RHQVSA
Trigger: GGCACTAACCTGGTGTCTGCAGCCCGTTCCCGTTAG...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTCTGCCCACTGAGGCTTaGGGTACCAGCATCTTACCC +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACLPTEA*GTSILP
Trigger: GGGTAAGATGCTGGTACCCCAAGCCTCAGTGGGCAG...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGAGGACTGAGCTCCTCTaGGAGCAGGGCTGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQRTELL*EQGCCE
Trigger: CTCACAACAGCCCTGCTCCCAGAGGAGCTCAGTCCT...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTGGAGGTCTGGCAAGCTaGGAGGCAGCACTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTGGLAS*EAALRD
Trigger: GTCCCTCAGTGCTGCCTCCCAGCTTGCCAGACCTCC...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCCATGACCTTGGCCACTaGCCTCCTGCTGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLHDLGH*PPAELL
Trigger: GAGCAGCTCAGCAGGAGGCCAGTGGCCAAGGTCATG...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTCCTGGGGTTGGGCTCTaGCCCCTTGATTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACPGVGL*PLDSSS
Trigger: AGAGCTTGAATCAAGGGGCCAGAGCCCAACCCCAGG...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
3UTR CAA 72 bp GCTGCAGACACCAGGTTAGTGCCCAGAATTTTGGTATaGGGACCTCCCTCCCACAAGCATTGCCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: AADTRLVPRILV*GPPSHKHCLLL
Trigger: GAGGAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAACCTGGTGTCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCAGGAGGCGACTCCAATaGAGCCGCTTTGTCCGGAGT +
Preference number: 4 (lower is better)
Translates to: LLPPCNRCLHESGVETPPRRRLQ*SRFVRS
Trigger: ACTCCGGACAAAGCGGCTTCATTGGAGTCGCCTCCT...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGTGGCTGGGGCTGTTTTaGTGGCTGATACACTGGTCC +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQWLGLF*WLIHWS
Trigger: GGACCAGTGTATCAGCCATCAAAACAGCCCCAGCCA...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTAGCCTCCAGCAGCCATaGATGTGGCGCCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTSLQQP*MWRLPH
Trigger: ATGTGGCAGGCGCCACATTCATGGCTGCTGGAGGCT...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTCTGCATGGTCAGCTTTaGCCTGACCGTAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACLHGQL*PDRRGC
Trigger: ACAACCCCTACGGTCAGGGCAAAGCTGACCATGCAG...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCTGGTGCTGCGGATGGTaGTGTTGTGCAGAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLWCCGW*CCAERS
Trigger: CGACCTCTCTGCACAACAGCACCATCCGCAGCACCA...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTGCTGGTAGATGGTGCTaGGGATGGTGCTGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LRSITPYSSLRKNVRSQAAGRWC*GWCCCA
Trigger: TGCACAACAGCACCATCCGCAGCACCATCTACCAGC...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCCGAGATCACGCCATTaGACACCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LLPPCNRCLHESGVETPPPRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGTGTGCAATGGCGTGATCTCGG...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGAACAGGACTGTTCCCTaGGGAGTCTTCGGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQNRTVP*GVFGLL
Trigger: GAGCAACCCGAAGACTCCCCAGGGAACAGTCCTGTT...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATACCTGCCCCTCAGAGGTaGCTGGGGTATGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: PVLRPWLWKPSNAVASGIPAPQR*LGYATG
Trigger: TCCTGTTGCATACCCCAGCCACCTCTGAGGGGCAGG...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTGGCTTTGGTTTCTGCTaGGCTGCTGCCTGTCATGGT +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACGFGFC*AAACHG
Trigger: ACCATGACAGGCAGCAGCCCAGCAGAAACCAAAGCC...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTCACACTGAACAGATCTaGGGGGTACTCTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACHTEQI*GVLSLG
Trigger: CCCAAGGGAGAGTACCCCCCAGATCTGTTCAGTGTG...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATACATGACCTTGGCCACTaGCCTCCTGCTGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PVLRPWLWKPSNAVASGIHDLGH*PPAELL
Trigger: GAGCAGCTCAGCAGGAGGCCAGTGGCCAAGGTCATG...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATATGGCCTGCTTCTGCCTaGTTTCAGGCCAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PVLRPWLWKPSNAVASGIWPASA*FQASPG
Trigger: CCCTGGACTGGCCTGAAACCAGGCAGAAGCAGGCCA...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTGACTGTCAGCCACAGTaGGAACACGATGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LRSITPYSSLRKNVRSQADCQPQ*EHDGQK
Trigger: CTTCTGCCCATCGTGTTCCCACTGTGGCTGACAGTC...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTTGGGTGAGAACATGCTaGAGGGTGGAGCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACWVRTC*RVEPGH
Trigger: ATGTCCTGGCTCCACCCTCCAGCATGTTCTCACCCA...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATACTTGCGGCCCCATCCTaGTCAATTTCCCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: PVLRPWLWKPSNAVASGILAAPS*SISPCW
Trigger: CCAGCATGGGGAAATTGATCAGGATGGGGCCGCAAG...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCTTCATCACTGCCCACTaGGGCTTGGGGTACCAGCAT +
Preference number: 4 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLFITAH*GLGYQH
Trigger: ATGCTGGTACCCCAAGCCTCAGTGGGCAGTGATGAA...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCTCAGCCACATCTTCCTaGCCGCCTGGATTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLSATSS*PPGFSF
Trigger: GAAGGAGAATCCAGGCGGTCAGGAAGATGTGGCTGA...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCGAGCCCACCACACCATaGGGTATGAGAACATGGCTA +
Preference number: 4 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGEPTTP*GMRTWL
Trigger: TAGCCATGTTCTCATACCTCATGGTGTGGTGGGCTC...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261892.11
CDS-3UTR TCA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCCTCCTTACTCCAGTCTaGGGAAGAACGTCAGATCCC +
Preference number: 4 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGLLTPV*GRTSDP
Trigger: GGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAG...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTTGGTTTCTGCTGGGCTaGTGCCTGTCATGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: LRSITPYSSLRKNVRSQAWFLLG*CLSWCL
Trigger: TAAGCACCATGACAGGCAGCAGCCCAGCAGAAACCA...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCATCATGCCAAAAACGTaGAGGACCACCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LLPPCNRCLHESGVETPPIMPKT*RTTQPC
Trigger: GCAGGGCTGGGTGGTCCTGCACGTTTTTGGCATGAT...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCAGGTGCTGGGTGCTGTaGAAGGTTTCTTTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LLPPCNRCLHESGVETPPRCWVL*KVSLPA
Trigger: GGCTGGCAAAGAAACCTTCCACAGCACCCAGCACCT...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCAGTGGTGAGCATGGCTaGGGTTGGCTTCACAACCAC +
Preference number: 4 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLSGEHG*GWLHNH
Trigger: GTGGTTGTGAAGCCAACCCCAGCCATGCTCACCACT...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCAGTGGTGAGCATGGCTaGGGTTGGCTTCACAACCAC +
Preference number: 4 (lower is better)
Translates to: LLPPCNRCLHESGVETPPSGEHG*GWLHNH
Trigger: GTGGTTGTGAAGCCAACCCCAGCCATGCTCACCACT...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp ATTAGGGTCACAAGAGATACAGTAACTTCTGCATGGTCTTCTGATCCATGCCCAGGGGGTACTCTCCCTTaGGGTGGAGGTCTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: IRVTRDTVTSAWSSDPCPGGTLP*GGGLAS
Trigger: GCTTGCCAGACCTCCACCCCAAGGGAGAGTACCCCC...TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGTATCTCTTGTGACCCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCGTTTGCTTTCTGCTTTaGCCTGGGGTTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLVCFLL*PGVGLW
Trigger: CCAGAGCCCAACCCCAGGCCAAAGCAGAAAGCAAAC...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCTTCGCCCTCTTCGCCTaGCATTTCACCTGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LLPPCNRCLHESGVETPPFALFA*HFTCAL
Trigger: GAGAGCACAGGTGAAATGCCAGGCGAAGAGGGCGAA...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGTGGGCCAGCAGCCTTTaGAATGATCAGGGAACAGTG +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQWASSL*NDQGTV
Trigger: CACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCA...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATACTCAAAGAGTGGGTCTaGAGCTGGACAGCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: PVLRPWLWKPSNAVASGILKEWV*SWTAGN
Trigger: GTTCCCTGCTGTCCAGCTTCAGACCCACTCTTTGAG...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGTTCGGAGCTAGGTTTTaGAGGGCTGCTGCTCATCAT +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQFGARF*RAAAHH
Trigger: ATGATGAGCAGCAGCCCTTCAAAACCTAGCTCCGAA...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CAGCATTTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCGACTCCAGGCAGCAGTaGAGGCTTTGGTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: QHFTVHHSLLQSEEERQIDSRQQ*RLWFLL
Trigger: CAGCAGAAACCAAAGCCTTCACTGCTGCCTGGAGTC...GATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAAATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTTACACTGGTCCTGGGTaGAGGATTCCTAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACYTGPG*RIPKTP
Trigger: TGGAGTCTTAGGAATCCTTCACCCAGGACCAGTGTA...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp ATTAGGGTCACAAGAGATACAGTAACTTCTGCATGGTCTTCTGATCCATGCCCAGACCGTAGGGGTTGTTaGGGTGCTGGGTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: IRVTRDTVTSAWSSDPCPDRRGC*GAGCCG
Trigger: TCCACAGCACCCAGCACCTCAACAACCCCTACGGTC...TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGTATCTCTTGTGACCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGGCTGGGAGGCAGCACTaGGGGACTAGGACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLAGRQH*GTRTEL
Trigger: GAGCTCAGTCCTAGTCCCTCAGTGCTGCCTCCCAGC...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp ATTAGGGTCACAAGAGATACAGTAACTTCTGCATGGTCTTCTGATCCATGCCCAAGCCTCCAGCAGCCATaGATGTGGCGCCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: IRVTRDTVTSAWSSDPCPSLQQP*MWRLPH
Trigger: ATGTGGCAGGCGCCACATTCATGGCTGCTGGAGGCT...TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGTATCTCTTGTGACCCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTCCTTCTGATCTCCCTTaGTGTCTGGAACAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTPSDLP*CLEQGL
Trigger: CAGCCCCTGTTCCAGACATCAAGGGAGATCAGAAGG...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCTTACTCCAGTCTaGGGAAGAACGTCAGATCCC +
Preference number: 4 (lower is better)
Translates to: LLPPCNRCLHESGVETPPLLTPV*GRTSDP
Trigger: GGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAG...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATAAACACCCCATTCTCCTaGCCCCAGCTCTCCTATGGA +
Preference number: 4 (lower is better)
Translates to: PVLRPWLWKPSNAVASGINTPFS*PQLSYG
Trigger: TCCATAGGAGAGCTGGGGGCAGGAGAATGGGGTGTT...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCTGGACGGCACGTAAGTaGCTACTCTTCTACCACGTG +
Preference number: 4 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLWTARK*LLFYHV
Trigger: CACGTGGTAGAAGAGTAGGCACTTACGTGCCGTCCA...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CAGCATTTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCTGCATGGTCAGCTTTaGCCTGACCGTAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: QHFTVHHSLLQSEEERQILHGQL*PDRRGC
Trigger: ACAACCCCTACGGTCAGGGCAAAGCTGACCATGCAG...GATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAAATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGGCAGAGAGGTCGAGCTaGTCCCTCGGGTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLAERSS*SLGSAR
Trigger: CCTTGCTGACCCGAGGGAGCAGCTCGACCTCTCTGC...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGCCCCCAGCTCTCCTATaGAATCCTAATTCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQPPALL*NPNSRQ
Trigger: CTGCCTTGAATTAGGATTCCATAGGAGAGCTGGGGG...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTAGGTGCTGGGTGCTGTaGAAGGTTTCTTTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTRCWVL*KVSLPA
Trigger: GGCTGGCAAAGAAACCTTCCACAGCACCCAGCACCT...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGGGAGGTCTGGCAAGCTaGGAGGCAGCACTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVGGLAS*EAALRD
Trigger: GTCCCTCAGTGCTGCCTCCCAGCTTGCCAGACCTCC...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGCTCATCCACCGCAATaGCCCCATCGCCCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: YTSYLGSSTALFSPCCHCAHPPQ*PHRPAC
Trigger: GCAAGCCGGGCGATGGGGCCATTGCGGTGGATGAGC...ACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCCCAGAATTTTGGTATTaGGACCTCCCTCCCACAAGC +
Preference number: 4 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGPEFWY*DLPPTS
Trigger: GCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGG...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCTACACTGGTCCTGGGTaGAGGATTCCTAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: LLPPCNRCLHESGVETPPYTGPG*RIPKTP
Trigger: TGGAGTCTTAGGAATCCTTCACCCAGGACCAGTGTA...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTGGATTGTCAGGCCCATaGTCTCTTCAGAAATCCCTA +
Preference number: 4 (lower is better)
Translates to: LRSITPYSSLRKNVRSQAGLSGP*SLQKSL
Trigger: TAGGGATTTCTGAAGAGATCATGGGCCTGACAATCC...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCACAAGCCATTGCTGCTaGCTGGAACTGGCTGTAATC +
Preference number: 4 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLTSHCC*LELAVI
Trigger: GATTACAGCCAGTTCCAGTCAGCAGCAATGGCTTGT...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTGATCCATGCCCATTGTaGGCAAGAGTGACTGATTCA +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACDPCPL*ARVTDS
Trigger: TGAATCAGTCACTCTTGCTCACAATGGGCATGGATC...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGCTTGAACCGGGGAGGTaGAGGTTGTGGTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLLEPGR*RLWCAE
Trigger: CTCGGCACACCACAACCTTCACCTCCCCGGTTCAAG...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR TCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGTCTAATCCCTCAAGGTaGCCACTGATGGAGACAACA +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQSNPSR*PLMETT
Trigger: TGTTGTCTCCATCAGTGGTCACCTTGAGGGATTAGA...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTTTGGACTCTTTAGAATaGCTTCCCTTCCCACTCCAC +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACLDSLE*LPFPLH
Trigger: GTGGAGTGGGAAGGGAAGTCATTCTAAAGAGTCCAA...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTTTGGACTCTTTAGAATaGCTTCCCTTCCCACTCCAC +
Preference number: 4 (lower is better)
Translates to: LRSITPYSSLRKNVRSQALDSLE*LPFPLH
Trigger: GTGGAGTGGGAAGGGAAGTCATTCTAAAGAGTCCAA...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGATCCCAGGCTGTGGGTaGGGTGACATCCCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMIPGCG*GDIPEA
Trigger: AGCCTCGGGGATGTCACCTCACCCACAGCCTGGGAT...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCTTTCTGCTGGGCTGCTaGCTGTCATGGTGCTTATTG +
Preference number: 4 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLFLLGC*LSWCLL
Trigger: CAATAAGCACCATGACAGGCAGCAGCCCAGCAGAAA...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCAGGAGGAGACAAAATTaGAGCGTGTGTTTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LLPPCNRCLHESGVETPPRRRQN*SVCLGQ
Trigger: CTGCCCCAAACACACGCTGCAATTTTGTCTCCTCCT...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGTCCCTTGAGAGTGGTTaGGGTGGTTTCCTCCATTAT +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQSLESG*GGFLHY
Trigger: ATAATGGAGGAAACCACCCCAACCACTCTCAAGGGA...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGCCTGCCCCTCAGAGGTaGCTGGGGTATGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLPAPQR*LGYATG
Trigger: TCCTGTTGCATACCCCAGCCACCTCTGAGGGGCAGG...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATCTTGGGGTGGAGGTCTaGCAAGCTGGGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHLGVEV*QAGRQH
Trigger: GTGCTGCCTCCCAGCTTGCCAGACCTCCACCCCAAG...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTCTTGGGGTGGAGGTCTaGCAAGCTGGGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: YTSYLGSSTALFSPCCHCLGVEV*QAGRQH
Trigger: GTGCTGCCTCCCAGCTTGCCAGACCTCCACCCCAAG...ACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATGGGGGTACTCTCCCTTaGGGTGGAGGTCTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHGGTLP*GGGLAS
Trigger: GCTTGCCAGACCTCCACCCCAAGGGAGAGTACCCCC...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGCTTTCTGCTTTGGCCTaGGGTTGGGCTCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVLSALA*GWALAP
Trigger: AGGGGCCAGAGCCCAACCCCAGGCCAAAGCAGAAAG...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCCTTTCTGCTTTGGCCTaGGGTTGGGCTCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVLSALA*GWALAP
Trigger: AGGGGCCAGAGCCCAACCCCAGGCCAAAGCAGAAAG...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATAATCTCCCTTGATGTCTaGAACAGGGGCTGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: PVLRPWLWKPSNAVASGIISLDV*NRGWCD
Trigger: GTCACACCAGCCCCTGTTCCAGACATCAAGGGAGAT...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCTGGCCTGCTTCTGCCTaGTTTCAGGCCAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVWPASA*FQASPG
Trigger: CCCTGGACTGGCCTGAAACCAGGCAGAAGCAGGCCA...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCGAAGGAAGAGGTAAATaGCCTGCTTCTGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGEGRGK*PASAWF
Trigger: AAACCAGGCAGAAGCAGGCCATTTACCTCTTCCTTC...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTGAAGGAAGAGGTAAATaGCCTGCTTCTGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LRSITPYSSLRKNVRSQAEGRGK*PASAWF
Trigger: AAACCAGGCAGAAGCAGGCCATTTACCTCTTCCTTC...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGACAGTGGGAACACGATaGGCAGAAGGAAGAGGTAAA +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQTVGTR*AEGRGK
Trigger: TTTACCTCTTCCTTCTGCCCATCGTGTTCCCACTGT...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGCTTAGGCCTTGGCTATaGAAACCCAGCAATGCAGTA +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQLRPWL*KPSNAV
Trigger: TACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAG...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTCAACCCTTCAGACCTTaGCATCTGGCTGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTQPFRP*HLAVFS
Trigger: TGAGAAGACAGCCAGATGTCAAGGTCTGAAGGGTTG...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGTTGTTTCCATTGTCATaGATGTGGACGGCACGTAAG +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQLFPLS*MWTARK
Trigger: CTTACGTGCCGTCCACATTCATGACAATGGAAACAA...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTTGTTCCACTTCATGGTaGACACATAGAAGGCATAGG +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACCSTSW*THRRHR
Trigger: CCTATGCCTTCTATGTGTTCACCATGAAGTGGAACA...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTTTTTGGCTTCACCGTaGTTTTCAGCACTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGFLASP*FSALSS
Trigger: GGAACTCAGTGCTGAAAATCACGGTGAAGCCAAAAA...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTGATGAGGTCAGGAATTaGTGTGCCTGCTGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTDEVRN*CACCKD
Trigger: ATCCTTGCAGCAGGCACATCAATTCCTGACCTCATC...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTAAAGGAGGAACATTGTaGAGCCCAGGATCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACKGGTL*SPGSCS
Trigger: TGAACAAGATCCTGGGCTTCACAATGTTCCTCCTTT...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGGGGGAGTCTTCGGGTTaGTCTTTCCCACTAACCCCC +
Preference number: 4 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVGESSG*SFPLTP
Trigger: GGGGGTTAGTGGGAAAGAGCAACCCGAAGACTCCCC...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATATTTCTGCTGGGCTGCTaGCTGTCATGGTGCTTATTG +
Preference number: 4 (lower is better)
Translates to: PVLRPWLWKPSNAVASGIFLLGC*LSWCLL
Trigger: CAATAAGCACCATGACAGGCAGCAGCCCAGCAGAAA...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAAAGGACCACCCAGCCCTaGCGCCGCTCCTCCACACTG +
Preference number: 4 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKRTTQP*RRSSTL
Trigger: CAGTGTGGAGGAGCGGCGGCAGGGCTGGGTGGTCCT...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTAGGACCACCCAGCCCTaGCGCCGCTCCTCCACACTG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFRTTQP*RRSSTL
Trigger: CAGTGTGGAGGAGCGGCGGCAGGGCTGGGTGGTCCT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATGCAGAGAGGTCGAGCTaGTCCCTCGGGTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINAERSS*SLGSAR
Trigger: CCTTGCTGACCCGAGGGAGCAGCTCGACCTCTCTGC...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCTGGTGCTGCGGATGGTaGTGTTGTGCAGAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVWCCGW*CCAERS
Trigger: CGACCTCTCTGCACAACAGCACCATCCGCAGCACCA...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp ATTAGGGTCACAAGAGATACAGTAACTTCTGCATGGTCTTCTGATCCATGCCCAGCTGGTAGATGGTGCTaGGGATGGTGCTGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: IRVTRDTVTSAWSSDPCPAGRWC*GWCCCA
Trigger: TGCACAACAGCACCATCCGCAGCACCATCTACCAGC...TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGTATCTCTTGTGACCCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCTTGTCTTATAGCTGCTaGGCCTATCCCAACCTTTGC +
Preference number: 4 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLLSYSC*AYPNLC
Trigger: GCAAAGGTTGGGATAGGCGCAGCAGCTATAAGACAA...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTTCAGACCTTGACATCTaGCTGTCTTCTCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTSDLDI*LSSQLW
Trigger: CCAGAGCTGAGAAGACAGCCAGATGTCAAGGTCTGA...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTCTGGCCAGTTATATCTaGTTACAGAAGGCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACLASYI*LQKASH
Trigger: ATGAGAGGCCTTCTGTAACCAGATATAACTGGCCAG...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTTGTTCTACTGGATGTTaGGGTGTCTTCCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACCSTGC*GVFLPS
Trigger: AGAAGGAAGGAAGACACCCCAACATCCAGTAGAACA...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATAATCTTCCTGACCGCCTaGATTCTCCTTCTGATCTCC +
Preference number: 4 (lower is better)
Translates to: PVLRPWLWKPSNAVASGIIFLTA*ILLLIS
Trigger: GGAGATCAGAAGGAGAATCCAGGCGGTCAGGAAGAT...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGACAGTAACTTCTGCATaGTCTTCTGATCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQTVTSA*SSDPCP
Trigger: TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGT...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTCCAGAATTTTGGTATTaGGACCTCCCTCCCACAAGC +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTPEFWY*DLPPTS
Trigger: GCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGG...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTGGCTGGGGCTGTTTTaGTGGCTGATACACTGGTCC +
Preference number: 4 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVWLGLF*WLIHWS
Trigger: GGACCAGTGTATCAGCCATCAAAACAGCCCCAGCCA...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGACTGCCCACAGAGCTTaGCACAGCCATGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMTAHRA*HSHVSQ
Trigger: CTGGGAGACATGGCTGTGTCAAGCTCTGTGGGCAGT...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR TCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATACTGCCCACAGAGCTTaGCACAGCCATGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHTAHRA*HSHVSQ
Trigger: CTGGGAGACATGGCTGTGTCAAGCTCTGTGGGCAGT...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR TCA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTCATTGTGAGCAAGAGTaGCTGATTCAGACAGATACA +
Preference number: 4 (lower is better)
Translates to: LRSITPYSSLRKNVRSQAHCEQE*LIQTDT
Trigger: TGTATCTGTCTGAATCAGTCACTCTTGCTCACAATG...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGATTATTTCCAAAGAATaGGAATCCTGGGGTAGCGAG +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQIISKE*ESWGSE
Trigger: CTCGCTACCCCAGGATTCTCATTCTTTGGAAATAAT...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGTATTCTCCACTGTCATaGTCAGTGTTGCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQYSPLS*SVLLHH
Trigger: GTGATGAAGCAACACTGAGCATGACAGTGGAGAATA...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATGTGCTTATTGTCACCTaGCCCTCAGAGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHVLIVT*PSEVAG
Trigger: CCCAGCCACCTCTGAGGGGCAGGTGACAATAAGCAC...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGCATGAATGTGGCGCCTaGCACATCCTCGGAGATCTG +
Preference number: 4 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVHECGA*HILGDL
Trigger: CAGATCTCCGAGGATGTGGCAGGCGCCACATTCATG...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTCGGATGGTGCTGTTGTaGAGAGAGGTCGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: YTSYLGSSTALFSPCCHCRMVLL*REVELL
Trigger: GAGCAGCTCGACCTCTCTGCACAACAGCACCATCCG...ACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGCTGGCATTTCACCTGTaGTCTCGGCCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLLAFHL*SRPQPH
Trigger: ATGTGGCTGAGGCCGAGAGCACAGGTGAAATGCCAG...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATCCGAGATCACGCCATTaGACACCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHPRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGTGTGCAATGGCGTGATCTCGG...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR GCA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTATGGAAACCCAGCAATaGAGTAGCATCAGGAATAAG +
Preference number: 4 (lower is better)
Translates to: LRSITPYSSLRKNVRSQAMETQQ*SSIRNK
Trigger: CTTATTCCTGATGCTACTGCATTGCTGGGTTTCCAT...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGCTAACGGGAACGGGCTaGAGACACCAGGTTAGTGCC +
Preference number: 4 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMLTGTG*RHQVSA
Trigger: GGCACTAACCTGGTGTCTGCAGCCCGTTCCCGTTAG...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCCATTCTGTCCTAAGATaGAGGCTACTCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLHSVLR*RLLWDS
Trigger: TGAATCCCAGAGTAGCCTCCATCTTAGGACAGAATG...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCCTGGCCAGTTATATCTaGTTACAGAAGGCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLLASYI*LQKASH
Trigger: ATGAGAGGCCTTCTGTAACCAGATATAACTGGCCAG...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTGTACCTGCTGCTGTTaGGCTGTAATTATTCTTGGT +
Preference number: 4 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGCTCCC*AVIILG
Trigger: ACCAAGAATAATTACAGCCCAACAGCAGCAGGTACA...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTTCTTCATTTCTCCCCTaGGTGTTGGGGTATACTTTT +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACSSFLP*VLGYTF
Trigger: AAAAGTATACCCCAACACCCAGGGGAGAAATGAAGA...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCTTCCCTCACTTGAGTTaGGCTGTAGCTCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLFPHLS*AVALHF
Trigger: GAAATGAAGAGCTACAGCCCAACTCAAGTGAGGGAA...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CAGCATTTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCTTCCATGACGCTCCTTaGAGAAGTCAAGACGTTTGC +
Preference number: 4 (lower is better)
Translates to: QHFTVHHSLLQSEEERQIFHDAP*RSQDVC
Trigger: GCAAACGTCTTGACTTCTCCAAGGAGCGTCATGGAA...GATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAAATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGAACAGGACTGTTCCCTaGGGAGTCTTCGGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLNRTVP*GVFGLL
Trigger: GAGCAACCCGAAGACTCCCCAGGGAACAGTCCTGTT...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGGGCTTTGGTTTCTGCTaGGCTGCTGCCTGTCATGGT +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLGFGFC*AAACHG
Trigger: ACCATGACAGGCAGCAGCCCAGCAGAAACCAAAGCC...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCGAGCATGGCTGGGGTTaGCTTCACAACCACACAGTG +
Preference number: 4 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVEHGWG*LHNHTV
Trigger: CACTGTGTGGTTGTGAAGCCAACCCCAGCCATGCTC...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGGATGACACCCAGGGCTaGAACGAAGTACTCGTCGCA +
Preference number: 4 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVDDTQG*NEVLVA
Trigger: TGCGACGAGTACTTCGTTCCAGCCCTGGGTGTCATC...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGGATGACACCCAGGGCTaGAACGAAGTACTCGTCGCA +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLDDTQG*NEVLVA
Trigger: TGCGACGAGTACTTCGTTCCAGCCCTGGGTGTCATC...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGCCTCCTCCTTCTCCTTaGCAAGGCGAACTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLPPPSP*QGELPS
Trigger: TGAGGGAAGTTCGCCTTGCCAAGGAGAAGGAGGAGG...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTACAGTGGGAACACGATaGGCAGAAGGAAGAGGTAAA +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTTVGTR*AEGRGK
Trigger: TTTACCTCTTCCTTCTGCCCATCGTGTTCCCACTGT...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGTGGGTGAGAACATGCTaGAGGGTGGAGCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLWVRTC*RVEPGH
Trigger: ATGTCCTGGCTCCACCCTCCAGCATGTTCTCACCCA...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR CCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTCTCAACTGTCATTGTTaGGTGAGAACATGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTLNCHC*VRTCWR
Trigger: CCTCCAGCATGTTCTCACCCAACAATGACAGTTGAG...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR CCA 90 bp CAGCATTTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCTGTTCTTAGGCCTTaGCTATGGAAACCCAGCAAT +
Preference number: 4 (lower is better)
Translates to: QHFTVHHSLLQSEEERQIPVLRP*LWKPSN
Trigger: ATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG...GATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAAATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGACTGCTGCCCACAATaGGGAAAGGCCCCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFDCCPQ*GKAPGS
Trigger: AGACCCCGGGGCCTTTCCTCATTGTGGGCAGCAGTC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp TACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGACTCCAGGCAGCAGTaGAGGCTTTGGTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: YTSYLGSSTALFSPCCHCDSRQQ*RLWFLL
Trigger: CAGCAGAAACCAAAGCCTTCACTGCTGCCTGGAGTC...ACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGCTGGGAGGCAGCACTaGGGGACTAGGACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFAGRQH*GTRTEL
Trigger: GAGCTCAGTCCTAGTCCCTCAGTGCTGCCTCCCAGC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAACCACTGGCCTCCTGCTaGGCTGCTCCTTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKPLASC*AAPSPR
Trigger: TCTGGGTGAAGGAGCAGCTCAGCAGGAGGCCAGTGG...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCCACTGGCCTCCTGCTaGGCTGCTCCTTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFPLASC*AAPSPR
Trigger: TCTGGGTGAAGGAGCAGCTCAGCAGGAGGCCAGTGG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGTCAGCCACATCTTCCTaGCCGCCTGGATTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMSATSS*PPGFSF
Trigger: GAAGGAGAATCCAGGCGGTCAGGAAGATGTGGCTGA...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATATTTTTGGCTTCACCGTaGTTTTCAGCACTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PVLRPWLWKPSNAVASGIFLASP*FSALSS
Trigger: GGAACTCAGTGCTGAAAATCACGGTGAAGCCAAAAA...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCAGGATTCTGACCAAATaGCCTAAAGATAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGRILTK*PKDKDE
Trigger: CTCATCCTTATCTTTAGGTCATTTGGTCAGAATCCT...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGAGGATTCTGACCAAATaGCCTAAAGATAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQRILTK*PKDKDE
Trigger: CTCATCCTTATCTTTAGGTCATTTGGTCAGAATCCT...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCTGCTGCCTGTCATGGTaGTTATTGTCACCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVCCLSW*LLSPAP
Trigger: AGGGGCAGGTGACAATAAGCACCATGACAGGCAGCA...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCGAAGGCTTTGGTTTCTaGTGGGCTGCTGCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVEGFGF*WAAACH
Trigger: ATGACAGGCAGCAGCCCAGCAGAAACCAAAGCCTTC...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGCATGAATGTGGCGCCTaGCACATCCTCGGAGATCTG +
Preference number: 4 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMHECGA*HILGDL
Trigger: CAGATCTCCGAGGATGTGGCAGGCGCCACATTCATG...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGCAGAGAGGTCGAGCTaGTCCCTCGGGTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFAERSS*SLGSAR
Trigger: CCTTGCTGACCCGAGGGAGCAGCTCGACCTCTCTGC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTCATTTCACCATCTTCTaGGTGGATTTCACCCTCATC +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTHFTIF*VDFTLI
Trigger: GATGAGGGTGAAATCCACGCAGAAGATGGTGAAATG...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTCACCCGAGCTCATTTTaGTCTGAAGCCAGTGATATT +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTHPSSF*SEASDI
Trigger: AATATCACTGGCTTCAGAGCAAAATGAGCTCGGGTG...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTTTTACCATCATAATCTaGAGTCACCCGAGCTCATTT +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACFTIII*SHPSSF
Trigger: AAATGAGCTCGGGTGACTGCAGATTATGATGGTAAA...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCATGGAAACCCAGCAATaGAGTAGCATCAGGAATAAG +
Preference number: 4 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLMETQQ*SSIRNK
Trigger: CTTATTCCTGATGCTACTGCATTGCTGGGTTTCCAT...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCTCAATTTCCCCATGCTaGCCAGTTATATCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: LLPPCNRCLHESGVETPPSISPC*PVISGY
Trigger: GTAACCAGATATAACTGGCCAGCATGGGGAAATTGA...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTCATCATCTCTTCACTaGAGAGGTCCCGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVSSSLH*RGPDWP
Trigger: TGGCCAGTCGGGACCTCTCCAGTGAAGAGATGATGA...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTATTCTTGGTTGTTGTTaGGATCATCTTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: FWASSLWNDQGTVSVGACILGCC*DHLGCS
Trigger: AGAACAGCCAAGATGATCCCAACAACAACCAAGAAT...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTAAGTCAGTGTTCTACTaGATGTTGGGGTGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTKSVFY*MLGCLP
Trigger: AGGAAGACACCCCAACATCCAGTAGAACACTGACTT...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCTCTTCATTTCTCCCCTaGGTGTTGGGGTATACTTTT +
Preference number: 4 (lower is better)
Translates to: LLPPCNRCLHESGVETPPSSFLP*VLGYTF
Trigger: AAAAGTATACCCCAACACCCAGGGGAGAAATGAAGA...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CAGCATTTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCTTCCCTCACTTGAGTTaGGCTGTAGCTCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: QHFTVHHSLLQSEEERQIFPHLS*AVALHF
Trigger: GAAATGAAGAGCTACAGCCCAACTCAAGTGAGGGAA...GATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAAATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp ATTAGGGTCACAAGAGATACAGTAACTTCTGCATGGTCTTCTGATCCATGCCCACTGGGGGTGATCGCATaGCTTGTTTCCATTGTCATG +
Preference number: 4 (lower is better)
Translates to: IRVTRDTVTSAWSSDPCPLGVIA*LVSIVM
Trigger: CATGACAATGGAAACAAGCCATGCGATCACCCCCAG...TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGTATCTCTTGTGACCCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGGAGCATGGCTGGGGTTaGCTTCACAACCACACAGTG +
Preference number: 4 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMEHGWG*LHNHTV
Trigger: CACTGTGTGGTTGTGAAGCCAACCCCAGCCATGCTC...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGGAGGTCTGGCAAGCTaGGAGGCAGCACTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFGGLAS*EAALRD
Trigger: GTCCCTCAGTGCTGCCTCCCAGCTTGCCAGACCTCC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCTTGGGGTGGAGGTCTaGCAAGCTGGGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFLGVEV*QAGRQH
Trigger: GTGCTGCCTCCCAGCTTGCCAGACCTCCACCCCAAG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATTACTCTCCCTTGGGGTaGAGGTCTGGCAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINYSPLG*RSGKLG
Trigger: TCCCAGCTTGCCAGACCTCCACCCCAAGGGAGAGTA...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGGGGGTACTCTCCCTTaGGGTGGAGGTCTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFGGTLP*GGGLAS
Trigger: GCTTGCCAGACCTCCACCCCAAGGGAGAGTACCCCC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGCACACTGAACAGATCTaGGGGGTACTCTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMHTEQI*GVLSLG
Trigger: CCCAAGGGAGAGTACCCCCCAGATCTGTTCAGTGTG...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTTGCTTTCTGCTTTaGCCTGGGGTTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: YTSYLGSSTALFSPCCHCVCFLL*PGVGLW
Trigger: CCAGAGCCCAACCCCAGGCCAAAGCAGAAAGCAAAC...ACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAAGTCTGGAACAGGGGCTaGTGTGACCGTGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKVWNRG*CDRDRR
Trigger: CCTGCGGTCACGGTCACACCAGCCCCTGTTCCAGAC...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGTCTGGAACAGGGGCTaGTGTGACCGTGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFVWNRG*CDRDRR
Trigger: CCTGCGGTCACGGTCACACCAGCCCCTGTTCCAGAC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATCTCCCTTGATGTCTaGAACAGGGGCTGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVISLDV*NRGWCD
Trigger: GTCACACCAGCCCCTGTTCCAGACATCAAGGGAGAT...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATGACTGTCAGCCACAGTaGGAACACGATGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHDCQPQ*EHDGQK
Trigger: CTTCTGCCCATCGTGTTCCCACTGTGGCTGACAGTC...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATAACAGTAACTTCTGCATaGTCTTCTGATCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: PVLRPWLWKPSNAVASGITVTSA*SSDPCP
Trigger: TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGT...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCTGGGCCAGCAGCCTTTaGAATGATCAGGGAACAGTG +
Preference number: 4 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVWASSL*NDQGTV
Trigger: CACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCA...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGAGCGGCCAGAGGCCTaGAGCCCAATGCCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFERPEA*SPMPAQ
Trigger: TTGAGCAGGCATTGGGCTCCAGGCCTCTGGCCGCTC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGACCGTAGGGGTTGTTaGGGTGCTGGGTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFDRRGC*GAGCCG
Trigger: TCCACAGCACCCAGCACCTCAACAACCCCTACGGTC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTAGCCTCCAGCAGCCATaGATGTGGCGCCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFSLQQP*MWRLPH
Trigger: ATGTGGCAGGCGCCACATTCATGGCTGCTGGAGGCT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp ATTAGGGTCACAAGAGATACAGTAACTTCTGCATGGTCTTCTGATCCATGCCCACCAGGAAGAAGAGGATaGGCATTATCAGGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: IRVTRDTVTSAWSSDPCPPGRRG*ALSGQG
Trigger: TCCTTGACCTGATAATGCTCATCCTCTTCTTCCTGG...TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGTATCTCTTGTGACCCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGGTCTTCTAAGGCCATaGCCTTGGCCACTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFGLLRP*PWPLAS
Trigger: GGAGGCCAGTGGCCAAGGTCATGGCCTTAGAAGACC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCCAGGCTGTGGAGCATaGGCTGGTAGATGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFPGCGA*AGRWCC
Trigger: GCAGCACCATCTACCAGCTCATGCTCCACAGCCTGG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGGATGAGGTCAGGAATTaGTGTGCCTGCTGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLDEVRN*CACCKD
Trigger: ATCCTTGCAGCAGGCACATCAATTCCTGACCTCATC...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGACAAGCCATTGCTGCTaGCTGGAACTGGCTGTAATC +
Preference number: 4 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVTSHCC*LELAVI
Trigger: GATTACAGCCAGTTCCAGTCAGCAGCAATGGCTTGT...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGATACAGGACAGGATATaGTTCGATCTTCTAACATCA +
Preference number: 4 (lower is better)
Translates to: PPCNRCLHESGVETPPLQIQDRI*FDLLTS
Trigger: TGATGTTAGAAGATCGAATCATATCCTGTCCTGTAT...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTCTGCATGGTCTTCTaGTCCATGCCCATTGTGAGC +
Preference number: 4 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVFCMVF*SMPIVS
Trigger: GCTCACAATGGGCATGGATCAGAAGACCATGCAGAA...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGCAGCAGCCTTTGGAATaGTCAGGGAACAGTGAGCGT +
Preference number: 4 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMQQPLE*SGNSER
Trigger: ACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTG...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGGGTATCCACAACCCTaGGACAGGGGGATGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFGYPQP*DRGMQV
Trigger: CACCTGCATCCCCCTGTCTCAGGGTTGTGGATACCC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATGGGGAGTCTTCGGGTTaGTCTTTCCCACTAACCCCC +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDGESSG*SFPLTP
Trigger: GGGGGTTAGTGGGAAAGAGCAACCCGAAGACTCCCC...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGCTGCCTGTCATGGTaGTTATTGTCACCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHCCLSW*LLSPAP
Trigger: AGGGGCAGGTGACAATAAGCACCATGACAGGCAGCA...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGGTTTCTGCTGGGCTaGTGCCTGTCATGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHWFLLG*CLSWCL
Trigger: TAAGCACCATGACAGGCAGCAGCCCAGCAGAAACCA...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGTGTGGAAGGTTTCTTTaGCAGCCTCCAGACTATGGC +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLCGRFL*QPPDYG
Trigger: GCCATAGTCTGGAGGCTGGCAAAGAAACCTTCCACA...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp ATTAGGGTCACAAGAGATACAGTAACTTCTGCATGGTCTTCTGATCCATGCCCAACATCCTCGGAGATCTaGAGCTTGTCTGTGATGACA +
Preference number: 4 (lower is better)
Translates to: IRVTRDTVTSAWSSDPCPTSSEI*SLSVMT
Trigger: TGTCATCACAGACAAGCTGCAGATCTCCGAGGATGT...TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGTATCTCTTGTGACCCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGCCACAATGGTACCAATaGCCACGTTGCTGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVPQWYQ*PRCCGK
Trigger: TTTCCCACAGCAACGTGGGCATTGGTACCATTGTGG...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp ATTAGGGTCACAAGAGATACAGTAACTTCTGCATGGTCTTCTGATCCATGCCCATTGTCTTATAGCTGCTaGGCCTATCCCAACCTTTGC +
Preference number: 4 (lower is better)
Translates to: IRVTRDTVTSAWSSDPCPLSYSC*AYPNLC
Trigger: GCAAAGGTTGGGATAGGCGCAGCAGCTATAAGACAA...TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGTATCTCTTGTGACCCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCGATGTAGACCACATCTaGATCTTTTGGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVDVDHI*IFWASS
Trigger: GCTGCTGGCCCAAAAGATGCAGATGTGGTCTACATC...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATATTGTTTCACCAACCTaGCTTCGGACGTCGGGGACT +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHIVSPT*LRTSGT
Trigger: AGTCCCCGACGTCCGAAGGCAGGTTGGTGAAACAAT...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339868.10
CDS-3UTR CCA 90 bp TACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTTCATCATCTCTTCACTaGAGAGGTCCCGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: YTSYLGSSTALFSPCCHCSSSLH*RGPDWP
Trigger: TGGCCAGTCGGGACCTCTCCAGTGAAGAGATGATGA...ACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATCTGCCCACTGAGGCTTaGGGTACCAGCATCTTACCC +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDLPTEA*GTSILP
Trigger: GGGTAAGATGCTGGTACCCCAAGCCTCAGTGGGCAG...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCATGTGTCAGAAAAGTTaGGGTGCTATCAAACATTCC +
Preference number: 4 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLMCQKS*GAIKHS
Trigger: GGAATGTTTGATAGCACCCCAACTTTTCTGACACAT...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCCTGCCCCTCAGAGGTaGCTGGGGTATGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFPAPQR*LGYATG
Trigger: TCCTGTTGCATACCCCAGCCACCTCTGAGGGGCAGG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATAGGACTGAGCTCCTCTaGGAGCAGGGCTGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDRTELL*EQGCCE
Trigger: CTCACAACAGCCCTGCTCCCAGAGGAGCTCAGTCCT...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATTACTCTCCCTTGGGGTaGAGGTCTGGCAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDYSPLG*RSGKLG
Trigger: TCCCAGCTTGCCAGACCTCCACCCCAAGGGAGAGTA...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCATGACCTTGGCCACTaGCCTCCTGCTGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFHDLGH*PPAELL
Trigger: GAGCAGCTCAGCAGGAGGCCAGTGGCCAAGGTCATG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATCCTCCTCCTTCTCCTTaGCAAGGCGAACTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINPPPSP*QGELPS
Trigger: TGAGGGAAGTTCGCCTTGCCAAGGAGAAGGAGGAGG...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCTTTCTGCTTTGGCCTaGGGTTGGGCTCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFLSALA*GWALAP
Trigger: AGGGGCCAGAGCCCAACCCCAGGCCAAAGCAGAAAG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATCTTCCTGACCGCCTaGATTCTCCTTCTGATCTCC +
Preference number: 4 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVIFLTA*ILLLIS
Trigger: GGAGATCAGAAGGAGAATCCAGGCGGTCAGGAAGAT...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTGGCCTGCTTCTGCCTaGTTTCAGGCCAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFWPASA*FQASPG
Trigger: CCCTGGACTGGCCTGAAACCAGGCAGAAGCAGGCCA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTAATAGCAGGAAGGGTTaGGCTCGTGCACCGACGGGG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFNSRKG*ARAPTG
Trigger: CCCCGTCGGTGCACGAGCCCAACCCTTCCTGCTATT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTAGTCAAGTGCCCTTCTaGAGCGGCCAGAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFSQVPF*SGQRPG
Trigger: TCCAGGCCTCTGGCCGCTCCAGAAGGGCACTTGACT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATCTCAAAGAGTGGGTCTaGAGCTGGACAGCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDLKEWV*SWTAGN
Trigger: GTTCCCTGCTGTCCAGCTTCAGACCCACTCTTTGAG...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATCAACCCTTCAGACCTTaGCATCTGGCTGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHQPFRP*HLAVFS
Trigger: TGAGAAGACAGCCAGATGTCAAGGTCTGAAGGGTTG...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCCTTGCGGCCCCATCCTaGTCAATTTCCCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITLAAPS*SISPCW
Trigger: CCAGCATGGGGAAATTGATCAGGATGGGGCCGCAAG...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCTTGCGGCCCCATCCTaGTCAATTTCCCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFLAAPS*SISPCW
Trigger: CCAGCATGGGGAAATTGATCAGGATGGGGCCGCAAG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTAGGAGGCGACTCCAATaGAGCCGCTTTGTCCGGAGT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFRRRLQ*SRFVRS
Trigger: ACTCCGGACAAAGCGGCTTCATTGGAGTCGCCTCCT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp ATTAGGGTCACAAGAGATACAGTAACTTCTGCATGGTCTTCTGATCCATGCCCACGTGATTTTCAGCACTaGGTTCCTGGCTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: IRVTRDTVTSAWSSDPCPRDFQH*VPGFQF
Trigger: AAACTGAAAGCCAGGAACTCAGTGCTGAAAATCACG...TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGTATCTCTTGTGACCCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCGTTTCACCAACCTGGTaGGCCCACCACACCATGAGG +
Preference number: 4 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITVSPTW*AHHTMR
Trigger: CCTCATGGTGTGGTGGGCTCACCAGGTTGGTGAAAC...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261892.11
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGTTTCACCAACCTGGTaGGCCCACCACACCATGAGG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFVSPTW*AHHTMR
Trigger: CCTCATGGTGTGGTGGGCTCACCAGGTTGGTGAAAC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTACTGCCCACAGAGCTTaGCACAGCCATGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFTAHRA*HSHVSQ
Trigger: CTGGGAGACATGGCTGTGTCAAGCTCTGTGGGCAGT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGTCTAATCCCTCAAGGTaGCCACTGATGGAGACAACA +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLSNPSR*PLMETT
Trigger: TGTTGTCTCCATCAGTGGTCACCTTGAGGGATTAGA...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGGTGGCACTTCACACTaGGTGCAGCTCAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFGGTSH*VQLRDR
Trigger: CCTGTCTCTGAGCTGCACTCAGTGTGAAGTGCCACC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATAACACCCCATTCTCCTaGCCCCAGCTCTCCTATGGA +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDNTPFS*PQLSYG
Trigger: TCCATAGGAGAGCTGGGGGCAGGAGAATGGGGTGTT...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATAGTAACCACCTCTCTTaGGGCCCCATCCTGATCAAT +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHSNHLS*GPILIN
Trigger: ATTGATCAGGATGGGGCCGCAAGAGAGGTGGTTACT...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGGGGAGTCTTCGGGTTaGTCTTTCCCACTAACCCCC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFGESSG*SFPLTP
Trigger: GGGGGTTAGTGGGAAAGAGCAACCCGAAGACTCCCC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGTGCTTATTGTCACCTaGCCCTCAGAGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFVLIVT*PSEVAG
Trigger: CCCAGCCACCTCTGAGGGGCAGGTGACAATAAGCAC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCGGATGGTGCTGTTGTaGAGAGAGGTCGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFRMVLL*REVELL
Trigger: GAGCAGCTCGACCTCTCTGCACAACAGCACCATCCG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTGGTGCTGCGGATGGTaGTGTTGTGCAGAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFWCCGW*CCAERS
Trigger: CGACCTCTCTGCACAACAGCACCATCCGCAGCACCA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTTATCAAATATGTTACTaGCCACAGAGCTTGACACAG +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTYQICY*PQSLTQ
Trigger: CTGTGTCAAGCTCTGTGGGCAGTAACATATTTGATA...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR GCA 90 bp TACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTAGGAGGAGACAAAATTaGAGCGTGTGTTTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: YTSYLGSSTALFSPCCHCRRRQN*SVCLGQ
Trigger: CTGCCCCAAACACACGCTGCAATTTTGTCTCCTCCT...ACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTGTTGTCATTGTGTTATaGATTCTTGGAATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LRSITPYSSLRKNVRSQAVVIVL*ILGISL
Trigger: AAGGGAAATTCCAAGAATGCATAACACAATGACAAC...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTTTTACCATCATAATCTaGAGTCACCCGAGCTCATTT +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTFTIII*SHPSSF
Trigger: AAATGAGCTCGGGTGACTGCAGATTATGATGGTAAA...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCCTGAGACAGGGGGATaGAGGTGGTGGCACTTCACA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFPETGG*RWWHFT
Trigger: TGTGAAGTGCCACCACCTGCATCCCCCTGTCTCAGG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCTGCCCACTGAGGCTTaGGGTACCAGCATCTTACCC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFLPTEA*GTSILP
Trigger: GGGTAAGATGCTGGTACCCCAAGCCTCAGTGGGCAG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp ATTAGGGTCACAAGAGATACAGTAACTTCTGCATGGTCTTCTGATCCATGCCCATGTTCTACTGGATGTTaGGGTGTCTTCCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: IRVTRDTVTSAWSSDPCPCSTGC*GVFLPS
Trigger: AGAAGGAAGGAAGACACCCCAACATCCAGTAGAACA...TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGTATCTCTTGTGACCCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATCTGGGGGTGATCGCATaGCTTGTTTCCATTGTCATG +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHLGVIA*LVSIVM
Trigger: CATGACAATGGAAACAAGCCATGCGATCACCCCCAG...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTAGGACTGAGCTCCTCTaGGAGCAGGGCTGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFRTELL*EQGCCE
Trigger: CTCACAACAGCCCTGCTCCCAGAGGAGCTCAGTCCT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTACTCTCCCTTGGGGTaGAGGTCTGGCAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFYSPLG*RSGKLG
Trigger: TCCCAGCTTGCCAGACCTCCACCCCAAGGGAGAGTA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCACTCGTCGCAAACAATaGCCAAGGCCACAAACACAT +
Preference number: 4 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVTRRKQ*PRPQTH
Trigger: ATGTGTTTGTGGCCTTGGCCATTGTTTGCGACGAGT...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAACCTGGGGTTGGGCTCTaGCCCCTTGATTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKPGVGL*PLDSSS
Trigger: AGAGCTTGAATCAAGGGGCCAGAGCCCAACCCCAGG...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCCTGGGGTTGGGCTCTaGCCCCTTGATTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFPGVGL*PLDSSS
Trigger: AGAGCTTGAATCAAGGGGCCAGAGCCCAACCCCAGG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGGGGGATGCAGGTGGTaGCACTTCACACTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFGGCRW*HFTLSA
Trigger: TGCACTCAGTGTGAAGTGCCACCACCTGCATCCCCC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATGAGAAGATTTCTCCATaGAGCCCAGCCAGGGGGTAT +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDEKISP*SPARGY
Trigger: ATACCCCCTGGCTGGGCTTCATGGAGAAATCTTCTC...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAATTCATCACTGCCCACTaGGGCTTGGGGTACCAGCAT +
Preference number: 4 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKFITAH*GLGYQH
Trigger: ATGCTGGTACCCCAAGCCTCAGTGGGCAGTGATGAA...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTTCATCACTGCCCACTaGGGCTTGGGGTACCAGCAT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFFITAH*GLGYQH
Trigger: ATGCTGGTACCCCAAGCCTCAGTGGGCAGTGATGAA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGACTCCAGGCAGCAGTaGAGGCTTTGGTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFDSRQQ*RLWFLL
Trigger: CAGCAGAAACCAAAGCCTTCACTGCTGCCTGGAGTC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTGGCTGGGGCTGTTTTaGTGGCTGATACACTGGTCC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFWLGLF*WLIHWS
Trigger: GGACCAGTGTATCAGCCATCAAAACAGCCCCAGCCA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATCCAGGAAGAAGAGGATaGGCATTATCAGGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHPGRRG*ALSGQG
Trigger: TCCTTGACCTGATAATGCTCATCCTCTTCTTCCTGG...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCTGTTCCACTTCATGGTaGACACATAGAAGGCATAGG +
Preference number: 4 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVCSTSW*THRRHR
Trigger: CCTATGCCTTCTATGTGTTCACCATGAAGTGGAACA...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCCTTCTGATCTCCCTTaGTGTCTGGAACAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFPSDLP*CLEQGL
Trigger: CAGCCCCTGTTCCAGACATCAAGGGAGATCAGAAGG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTCAGCCACATCTTCCTaGCCGCCTGGATTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFSATSS*PPGFSF
Trigger: GAAGGAGAATCCAGGCGGTCAGGAAGATGTGGCTGA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATCCACACCATGAGGTATaGGAACATGGCTATCCACAT +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHPHHEV*EHGYPH
Trigger: ATGTGGATAGCCATGTTCTCATACCTCATGGTGTGG...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261892.11
CDS-3UTR TCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTATACAGGACAGGATATaGTTCGATCTTCTAACATCA +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTIQDRI*FDLLTS
Trigger: TGATGTTAGAAGATCGAATCATATCCTGTCCTGTAT...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp ATTAGGGTCACAAGAGATACAGTAACTTCTGCATGGTCTTCTGATCCATGCCCACATTGTGAGCAAGAGTaGCTGATTCAGACAGATACA +
Preference number: 4 (lower is better)
Translates to: IRVTRDTVTSAWSSDPCPHCEQE*LIQTDT
Trigger: TGTATCTGTCTGAATCAGTCACTCTTGCTCACAATG...TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGTATCTCTTGTGACCCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTTTGGACTCTTTAGAATaGCTTCCCTTCCCACTCCAC +
Preference number: 4 (lower is better)
Translates to: YTSYLGSSTALFSPCCHCLDSLE*LPFPLH
Trigger: GTGGAGTGGGAAGGGAAGTCATTCTAAAGAGTCCAA...ACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGAGGGGACAAAAGTGTaGAGCGGACACAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFEGTKV*SGHRVT
Trigger: GGTGACTCTGTGTCCGCTTCACACTTTTGTCCCCTC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGCCTTCTTTCTGTACCTaGTGCTGTTGGGCTGTAATT +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLPSFCT*CCWAVI
Trigger: AATTACAGCCCAACAGCAGCAGGTACAGAAAGAAGG...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCTGCATGGTCAGCTTTaGCCTGACCGTAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFLHGQL*PDRRGC
Trigger: ACAACCCCTACGGTCAGGGCAAAGCTGACCATGCAG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAAATCATGCCAAAAACGTaGAGGACCACCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKIMPKT*RTTQPC
Trigger: GCAGGGCTGGGTGGTCCTGCACGTTTTTGGCATGAT...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTATCATGCCAAAAACGTaGAGGACCACCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFIMPKT*RTTQPC
Trigger: GCAGGGCTGGGTGGTCCTGCACGTTTTTGGCATGAT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp ATTAGGGTCACAAGAGATACAGTAACTTCTGCATGGTCTTCTGATCCATGCCCACAAACACATACATCATaGCAAAAACGTGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: IRVTRDTVTSAWSSDPCPQTHTS*QKRAGP
Trigger: TGGTCCTGCACGTTTTTGGCATGATGTATGTGTTTG...TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGTATCTCTTGTGACCCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGACATCCTCGGAGATCTaGAGCTTGTCTGTGATGACA +
Preference number: 4 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMTSSEI*SLSVMT
Trigger: TGTCATCACAGACAAGCTGCAGATCTCCGAGGATGT...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCATGAATGTGGCGCCTaGCACATCCTCGGAGATCTG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFHECGA*HILGDL
Trigger: CAGATCTCCGAGGATGTGGCAGGCGCCACATTCATG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGCTGGTAGATGGTGCTaGGGATGGTGCTGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFAGRWC*GWCCCA
Trigger: TGCACAACAGCACCATCCGCAGCACCATCTACCAGC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCTGGCATTTCACCTGTaGTCTCGGCCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFLAFHL*SRPQPH
Trigger: ATGTGGCTGAGGCCGAGAGCACAGGTGAAATGCCAG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATGGTCAGGAATTGATGTaGCTGCTGCAAGGATTGTCA +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHGQELM*LLQGLS
Trigger: TGACAATCCTTGCAGCAGGCACATCAATTCCTGACC...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGAGCTTGTCTTATAGCTaGTGCGCCTATCCCAACCTT +
Preference number: 4 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMSLSYS*CAYPNL
Trigger: AAGGTTGGGATAGGCGCAGCAGCTATAAGACAAGCT...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGCATTCTGTCCTAAGATaGAGGCTACTCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVHSVLR*RLLWDS
Trigger: TGAATCCCAGAGTAGCCTCCATCTTAGGACAGAATG...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATAGGCTGTAATTATTCTTaGTTGTTGTTGGGATCATCT +
Preference number: 4 (lower is better)
Translates to: PVLRPWLWKPSNAVASGIGCNYS*LLLGSS
Trigger: AGATGATCCCAACAACAACCAAGAATAATTACAGCC...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGAAGTCAGTGTTCTACTaGATGTTGGGGTGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLKSVFY*MLGCLP
Trigger: AGGAAGACACCCCAACATCCAGTAGAACACTGACTT...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTACTCTTCTACCACGTaGGGAAGGAGTATACTTCAC +
Preference number: 4 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVYSSTT*GRSILH
Trigger: GTGAAGTATACTCCTTCCCCACGTGGTAGAAGAGTA...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTAACAGGACTGTTCCCTaGGGAGTCTTCGGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFNRTVP*GVFGLL
Trigger: GAGCAACCCGAAGACTCCCCAGGGAACAGTCCTGTT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGGCTTTGGTTTCTGCTaGGCTGCTGCCTGTCATGGT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFGFGFC*AAACHG
Trigger: ACCATGACAGGCAGCAGCCCAGCAGAAACCAAAGCC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTAGGTGCTGGGTGCTGTaGAAGGTTTCTTTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFRCWVL*KVSLPA
Trigger: GGCTGGCAAAGAAACCTTCCACAGCACCCAGCACCT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGAGCATGGCTGGGGTTaGCTTCACAACCACACAGTG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFEHGWG*LHNHTV
Trigger: CACTGTGTGGTTGTGAAGCCAACCCCAGCCATGCTC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTAGTGGTGAGCATGGCTaGGGTTGGCTTCACAACCAC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFSGEHG*GWLHNH
Trigger: GTGGTTGTGAAGCCAACCCCAGCCATGCTCACCACT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCACACTGAACAGATCTaGGGGGTACTCTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFHTEQI*GVLSLG
Trigger: CCCAAGGGAGAGTACCCCCCAGATCTGTTCAGTGTG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATACTCGTCGCAAACAATaGCCAAGGCCACAAACACAT +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHTRRKQ*PRPQTH
Trigger: ATGTGTTTGTGGCCTTGGCCATTGTTTGCGACGAGT...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGATGACACCCAGGGCTaGAACGAAGTACTCGTCGCA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFDDTQG*NEVLVA
Trigger: TGCGACGAGTACTTCGTTCCAGCCCTGGGTGTCATC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCCTCCTCCTTCTCCTTaGCAAGGCGAACTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFPPPSP*QGELPS
Trigger: TGAGGGAAGTTCGCCTTGCCAAGGAGAAGGAGGAGG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGTTTGCTTTCTGCTTTaGCCTGGGGTTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFVCFLL*PGVGLW
Trigger: CCAGAGCCCAACCCCAGGCCAAAGCAGAAAGCAAAC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAATTCGCCCTCTTCGCCTaGCATTTCACCTGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKFALFA*HFTCAL
Trigger: GAGAGCACAGGTGAAATGCCAGGCGAAGAGGGCGAA...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTTCGCCCTCTTCGCCTaGCATTTCACCTGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFFALFA*HFTCAL
Trigger: GAGAGCACAGGTGAAATGCCAGGCGAAGAGGGCGAA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCTCACCATCTTCTGCGTaGATTTCACCCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVSPSSA*ISPSSS
Trigger: TGAAGATGAGGGTGAAATCCACGCAGAAGATGGTGA...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGACTGTCAGCCACAGTaGGAACACGATGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFDCQPQ*EHDGQK
Trigger: CTTCTGCCCATCGTGTTCCCACTGTGGCTGACAGTC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATCTCAACTGTCATTGTTaGGTGAGAACATGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHLNCHC*VRTCWR
Trigger: CCTCCAGCATGTTCTCACCCAACAATGACAGTTGAG...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR CCA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCAAAAGATGGAATACTTaGAACACCTTAGCCATCATT +
Preference number: 4 (lower is better)
Translates to: LLPPCNRCLHESGVETPPKRWNT*NTLAII
Trigger: AATGATGGCTAAGGTGTTCCAAGTATTCCATCTTTT...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGCTTAGGCCTTGGCTATaGAAACCCAGCAATGCAGTA +
Preference number: 4 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMLRPWL*KPSNAV
Trigger: TACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAG...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTACAGGGGGATGCAGGTaGTGGCACTTCACACTGAGT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFTGGCR*WHFTLS
Trigger: ACTCAGTGTGAAGTGCCACCACCTGCATCCCCCTGT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATCGTGATTTTCAGCACTaGGTTCCTGGCTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHRDFQH*VPGFQF
Trigger: AAACTGAAAGCCAGGAACTCAGTGCTGAAAATCACG...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGAGCCCACCACACCATaGGGTATGAGAACATGGCTA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFEPTTP*GMRTWL
Trigger: TAGCCATGTTCTCATACCTCATGGTGTGGTGGGCTC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATGGATTGTCAGGCCCATaGTCTCTTCAGAAATCCCTA +
Preference number: 4 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINGLSGP*SLQKSL
Trigger: TAGGGATTTCTGAAGAGATCATGGGCCTGACAATCC...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATGATCCATGCCCATTGTaGGCAAGAGTGACTGATTCA +
Preference number: 4 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINDPCPL*ARVTDS
Trigger: TGAATCAGTCACTCTTGCTCACAATGGGCATGGATC...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGTTCTCGGGAGGATTCTaGCCAAATGACCTAAAGATA +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLFSGGF*PNDLKI
Trigger: TATCTTTAGGTCATTTGGTCAGAATCCTCCCGAGAA...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGGCCAAACTCCCACAGTaGTATCAAATATGTTACTGC +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLAKLPQ*YQICYC
Trigger: GCAGTAACATATTTGATATCACTGTGGGAGTTTGGC...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505666.2
CDS-3UTR GCA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCGTGTTGCTTCATCACTaGCCACTGAGGCTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITVLLHH*PLRLGV
Trigger: TACCCCAAGCCTCAGTGGGCAGTGATGAAGCAACAC...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGTGTTGCTTCATCACTaGCCACTGAGGCTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFVLLHH*PLRLGV
Trigger: TACCCCAAGCCTCAGTGGGCAGTGATGAAGCAACAC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGTATTCTCCACTGTCATaGTCAGTGTTGCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLYSPLS*SVLLHH
Trigger: GTGATGAAGCAACACTGAGCATGACAGTGGAGAATA...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATCCTTCTTTCTGTACCTaGTGCTGTTGGGCTGTAATT +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHPSFCT*CCWAVI
Trigger: AATTACAGCCCAACAGCAGCAGGTACAGAAAGAAGG...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAATGGACGGCACGTAAGTaGCTACTCTTCTACCACGTG +
Preference number: 4 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKWTARK*LLFYHV
Trigger: CACGTGGTAGAAGAGTAGGCACTTACGTGCCGTCCA...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTGGACGGCACGTAAGTaGCTACTCTTCTACCACGTG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFWTARK*LLFYHV
Trigger: CACGTGGTAGAAGAGTAGGCACTTACGTGCCGTCCA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGAGAAGTCAAGACGTTTaGTTCTACCTCATGTGTCAG +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLRSQDV*FYLMCQ
Trigger: CTGACACATGAGGTAGAAGCAAACGTCTTGACTTCT...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTGCTGCCTGTCATGGTaGTTATTGTCACCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFCCLSW*LLSPAP
Trigger: AGGGGCAGGTGACAATAAGCACCATGACAGGCAGCA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTGGTTTCTGCTGGGCTaGTGCCTGTCATGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFWFLLG*CLSWCL
Trigger: TAAGCACCATGACAGGCAGCAGCCCAGCAGAAACCA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAAGAAGGCTTTGGTTTCTaGTGGGCTGCTGCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKEGFGF*WAAACH
Trigger: ATGACAGGCAGCAGCCCAGCAGAAACCAAAGCCTTC...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGAAGGCTTTGGTTTCTaGTGGGCTGCTGCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFEGFGF*WAAACH
Trigger: ATGACAGGCAGCAGCCCAGCAGAAACCAAAGCCTTC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATACCCAGACCTCGATATaGTTGTTCCACTTCATGGTG +
Preference number: 4 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINTQTSI*LFHFMV
Trigger: CACCATGAAGTGGAACAAGCATATCGAGGTCTGGGT...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTCATTTCACCATCTTCTaGGTGGATTTCACCCTCATC +
Preference number: 4 (lower is better)
Translates to: YTSYLGSSTALFSPCCHCHFTIF*VDFTLI
Trigger: GATGAGGGTGAAATCCACGCAGAAGATGGTGAAATG...ACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATAGCTTGTCTTATAGCTaGTGCGCCTATCCCAACCTT +
Preference number: 4 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINSLSYS*CAYPNL
Trigger: AAGGTTGGGATAGGCGCAGCAGCTATAAGACAAGCT...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATGATGTAGACCACATCTaGATCTTTTGGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDDVDHI*IFWASS
Trigger: GCTGCTGGCCCAAAAGATGCAGATGTGGTCTACATC...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTATCCTTACAGTCAAGTaGCCTTCTGGAGCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFILTVK*PSGAAR
Trigger: TCTGGCCGCTCCAGAAGGGCACTTGACTGTAAGGAT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGCTGTCTTCTCAGCTCTaGAAACTTGTCAGAATCCAA +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLLSSQL*KLVRIQ
Trigger: TTGGATTCTGACAAGTTTCCAGAGCTGAGAAGACAG...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTCATCATCTCTTCACTaGAGAGGTCCCGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFSSSLH*RGPDWP
Trigger: TGGCCAGTCGGGACCTCTCCAGTGAAGAGATGATGA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTATCTCCCTTGATGTCTaGAACAGGGGCTGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFISLDV*NRGWCD
Trigger: GTCACACCAGCCCCTGTTCCAGACATCAAGGGAGAT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGTTCACCTTCACCTTCTaGTTGAGTTTCACCTCCACT +
Preference number: 4 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMFTFTF*LSFTST
Trigger: AGTGGAGGTGAAACTCAACCAGAAGGTGAAGGTGAA...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTCACCATCTTCTGCGTaGATTTCACCCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHSPSSA*ISPSSS
Trigger: TGAAGATGAGGGTGAAATCCACGCAGAAGATGGTGA...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTAAAAGATGGAATACTTaGAACACCTTAGCCATCATT +
Preference number: 4 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTKRWNT*NTLAII
Trigger: AATGATGGCTAAGGTGTTCCAAGTATTCCATCTTTT...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTTCGGAGCTAGGTTTTaGAGGGCTGCTGCTCATCAT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFFGARF*RAAAHH
Trigger: ATGATGAGCAGCAGCCCTTCAAAACCTAGCTCCGAA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATTATCAAACATTCCCTTaGGAGTGGTTGGGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINYQTFP*EWLGWF
Trigger: AAACCACCCCAACCACTCTCAAGGGAATGTTTGATA...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTACACTGGTCCTGGGTaGAGGATTCCTAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFYTGPG*RIPKTP
Trigger: TGGAGTCTTAGGAATCCTTCACCCAGGACCAGTGTA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGATGAGGTCAGGAATTaGTGTGCCTGCTGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFDEVRN*CACCKD
Trigger: ATCCTTGCAGCAGGCACATCAATTCCTGACCTCATC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATCAGGCAAGCCCACAGTaGTATCAAATATGTTACTGC +
Preference number: 4 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINQASPQ*YQICYC
Trigger: GCAGTAACATATTTGATATCACTGTGGGCTTGCCTG...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCTTCTGCATGGTCTTCTaGTCCATGCCCATTGTGAGC +
Preference number: 4 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITFCMVF*SMPIVS
Trigger: GCTCACAATGGGCATGGATCAGAAGACCATGCAGAA...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATCCTCAAGGTGACCACTaGTGGAGACAACATGAATTT +
Preference number: 4 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINPQGDH*WRQHEF
Trigger: AAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGG...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR TCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATTCTAATCCCTCAAGGTaGCCACTGATGGAGACAACA +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDSNPSR*PLMETT
Trigger: TGTTGTCTCCATCAGTGGTCACCTTGAGGGATTAGA...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR GCA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCAGTAACCACCTCTCTTaGGGCCCCATCCTGATCAAT +
Preference number: 4 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITSNHLS*GPILIN
Trigger: ATTGATCAGGATGGGGCCGCAAGAGAGGTGGTTACT...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTAGTAACCACCTCTCTTaGGGCCCCATCCTGATCAAT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFSNHLS*GPILIN
Trigger: ATTGATCAGGATGGGGCCGCAAGAGAGGTGGTTACT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTTTCTGCTGGGCTGCTaGCTGTCATGGTGCTTATTG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFFLLGC*LSWCLL
Trigger: CAATAAGCACCATGACAGGCAGCAGCCCAGCAGAAA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCTGTGGAAGGTTTCTTTaGCAGCCTCCAGACTATGGC +
Preference number: 4 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITCGRFL*QPPDYG
Trigger: GCCATAGTCTGGAGGCTGGCAAAGAAACCTTCCACA...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTGTGGAAGGTTTCTTTaGCAGCCTCCAGACTATGGC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFCGRFL*QPPDYG
Trigger: GCCATAGTCTGGAGGCTGGCAAAGAAACCTTCCACA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAACCACAATGGTACCAATaGCCACGTTGCTGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKPQWYQ*PRCCGK
Trigger: TTTCCCACAGCAACGTGGGCATTGGTACCATTGTGG...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCCACAATGGTACCAATaGCCACGTTGCTGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFPQWYQ*PRCCGK
Trigger: TTTCCCACAGCAACGTGGGCATTGGTACCATTGTGG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATGGTCAGGAATTGATGTaGCTGCTGCAAGGATTGTCA +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDGQELM*LLQGLS
Trigger: TGACAATCCTTGCAGCAGGCACATCAATTCCTGACC...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATCACCCGAGCTCATTTTaGTCTGAAGCCAGTGATATT +
Preference number: 4 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINHPSSF*SEASDI
Trigger: AATATCACTGGCTTCAGAGCAAAATGAGCTCGGGTG...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCTGGAGCCCAATGCCTaGTCAAGCATAACTAGGTCA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFLEPNA*SSITRS
Trigger: TGACCTAGTTATGCTTGAGCAGGCATTGGGCTCCAG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCCCCCCAGCTCTCCTATaGAATCCTAATTCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITPPALL*NPNSRQ
Trigger: CTGCCTTGAATTAGGATTCCATAGGAGAGCTGGGGG...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTTGTACCTGCTGCTGTTaGGCTGTAATTATTCTTGGT +
Preference number: 4 (lower is better)
Translates to: YTSYLGSSTALFSPCCHCCTCCC*AVIILG
Trigger: ACCAAGAATAATTACAGCCCAACAGCAGCAGGTACA...ACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATTACTCTTCTACCACGTaGGGAAGGAGTATACTTCAC +
Preference number: 4 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINYSSTT*GRSILH
Trigger: GTGAAGTATACTCCTTCCCCACGTGGTAGAAGAGTA...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCTGGGGGTGATCGCATaGCTTGTTTCCATTGTCATG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFLGVIA*LVSIVM
Trigger: CATGACAATGGAAACAAGCCATGCGATCACCCCCAG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATTCCCTTGAGAGTGGTTaGGGTGGTTTCCTCCATTAT +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDSLESG*GGFLHY
Trigger: ATAATGGAGGAAACCACCCCAACCACTCTCAAGGGA...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATGTGTCAGAAAAGTTaGGGTGCTATCAAACATTCC +
Preference number: 4 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVMCQKS*GAIKHS
Trigger: GGAATGTTTGATAGCACCCCAACTTTTCTGACACAT...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATTTCCATGACGCTCCTTaGAGAAGTCAAGACGTTTGC +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDFHDAP*RSQDVC
Trigger: GCAAACGTCTTGACTTCTCCAAGGAGCGTCATGGAA...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTATCTTCCTGACCGCCTaGATTCTCCTTCTGATCTCC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFIFLTA*ILLLIS
Trigger: GGAGATCAGAAGGAGAATCCAGGCGGTCAGGAAGAT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATCCTGTTCTTAGGCCTTaGCTATGGAAACCCAGCAAT +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDPVLRP*LWKPSN
Trigger: ATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGAAAGAGCCCGAGAATaGGGAGAGATTCAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFERARE*GEIQGN
Trigger: ATTGCCCTGAATCTCTCCCCATTCTCGGGCTCTTTC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCCAGGAAGAAGAGGATaGGCATTATCAGGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFPGRRG*ALSGQG
Trigger: TCCTTGACCTGATAATGCTCATCCTCTTCTTCCTGG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCCACACCATGAGGTATaGGAACATGGCTATCCACAT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFPHHEV*EHGYPH
Trigger: ATGTGGATAGCCATGTTCTCATACCTCATGGTGTGG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGGATTGTCAGGCCCATaGTCTCTTCAGAAATCCCTA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFGLSGP*SLQKSL
Trigger: TAGGGATTTCTGAAGAGATCATGGGCCTGACAATCC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGAGACTCACCAATAACTaGAGCTACAGTGATTACAAA +
Preference number: 4 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLRLTNN*SYSDYK
Trigger: TTTGTAATCACTGTAGCTTCAGTTATTGGTGAGTCT...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATCCTCAAGGTGACCACTaGTGGAGACAACATGAATTT +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDPQGDH*WRQHEF
Trigger: AAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGG...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR TCA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATTTCTCGGGAGGATTCTaGCCAAATGACCTAAAGATA +
Preference number: 4 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINFSGGF*PNDLKI
Trigger: TATCTTTAGGTCATTTGGTCAGAATCCTCCCGAGAA...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATCAAACACATACATCATaGCAAAAACGTGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINQTHTS*QKRAGP
Trigger: TGGTCCTGCACGTTTTTGGCATGATGTATGTGTTTG...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTACATCCTCGGAGATCTaGAGCTTGTCTGTGATGACA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFTSSEI*SLSVMT
Trigger: TGTCATCACAGACAAGCTGCAGATCTCCGAGGATGT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTACCCAGACCTCGATATaGTTGTTCCACTTCATGGTG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFTQTSI*LFHFMV
Trigger: CACCATGAAGTGGAACAAGCATATCGAGGTCTGGGT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGGTCAGGAATTGATGTaGCTGCTGCAAGGATTGTCA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFGQELM*LLQGLS
Trigger: TGACAATCCTTGCAGCAGGCACATCAATTCCTGACC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp TACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTTATCAAATATGTTACTaGCCACAGAGCTTGACACAG +
Preference number: 4 (lower is better)
Translates to: YTSYLGSSTALFSPCCHCYQICY*PQSLTQ
Trigger: CTGTGTCAAGCTCTGTGGGCAGTAACATATTTGATA...ACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR GCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATGCCTATCCCAACCTTTaGCCCCAGTTATCTCATTTA +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDAYPNL*PQLSHL
Trigger: TAAATGAGATAACTGGGGGCAAAGGTTGGGATAGGC...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGCACTTCACACTGAGTaGAGCTCAGAGACAGGATTT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFALHTE*SSETGF
Trigger: AAATCCTGTCTCTGAGCTGCACTCAGTGTGAAGTGC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTCCCTTGAGAGTGGTTaGGGTGGTTTCCTCCATTAT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFSLESG*GGFLHY
Trigger: ATAATGGAGGAAACCACCCCAACCACTCTCAAGGGA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTTCCATGACGCTCCTTaGAGAAGTCAAGACGTTTGC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFFHDAP*RSQDVC
Trigger: GCAAACGTCTTGACTTCTCCAAGGAGCGTCATGGAA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATTACTTTCCACTCTTCTaGGGGGAAACAGGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINYFPLF*GETGCF
Trigger: AAAACAACCTGTTTCCCCCCAGAAGAGTGGAAAGTA...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTACTCGTCGCAAACAATaGCCAAGGCCACAAACACAT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFTRRKQ*PRPQTH
Trigger: ATGTGTTTGTGGCCTTGGCCATTGTTTGCGACGAGT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGAAGGAAGAGGTAAATaGCCTGCTTCTGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFEGRGK*PASAWF
Trigger: AAACCAGGCAGAAGCAGGCCATTTACCTCTTCCTTC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTACAGTGGGAACACGATaGGCAGAAGGAAGAGGTAAA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFTVGTR*AEGRGK
Trigger: TTTACCTCTTCCTTCTGCCCATCGTGTTCCCACTGT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAACTCAACTGTCATTGTTaGGTGAGAACATGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKLNCHC*VRTCWR
Trigger: CCTCCAGCATGTTCTCACCCAACAATGACAGTTGAG...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR TCA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCTTGTTTCCATTGTCATaGATGTGGACGGCACGTAAG +
Preference number: 4 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITLFPLS*MWTARK
Trigger: CTTACGTGCCGTCCACATTCATGACAATGGAAACAA...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTTGTTTCCATTGTCATaGATGTGGACGGCACGTAAG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFLFPLS*MWTARK
Trigger: CTTACGTGCCGTCCACATTCATGACAATGGAAACAA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAATATCAAACATTCCCTTaGGAGTGGTTGGGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKYQTFP*EWLGWF
Trigger: AAACCACCCCAACCACTCTCAAGGGAATGTTTGATA...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTATCAAACATTCCCTTaGGAGTGGTTGGGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFYQTFP*EWLGWF
Trigger: AAACCACCCCAACCACTCTCAAGGGAATGTTTGATA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTGTTCCACTTCATGGTaGACACATAGAAGGCATAGG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFCSTSW*THRRHR
Trigger: CCTATGCCTTCTATGTGTTCACCATGAAGTGGAACA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCGTGATTTTCAGCACTaGGTTCCTGGCTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFRDFQH*VPGFQF
Trigger: AAACTGAAAGCCAGGAACTCAGTGCTGAAAATCACG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTTTTTGGCTTCACCGTaGTTTTCAGCACTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFFLASP*FSALSS
Trigger: GGAACTCAGTGCTGAAAATCACGGTGAAGCCAAAAA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
39% GC, longest homopolymer 9 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAACAGGCAAGCCCACAGTaGTATCAAATATGTTACTGC +
Preference number: 4 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKQASPQ*YQICYC
Trigger: GCAGTAACATATTTGATATCACTGTGGGCTTGCCTG...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCAAAGGAGGAACATTGTaGAGCCCAGGATCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITKGGTL*SPGSCS
Trigger: TGAACAAGATCCTGGGCTTCACAATGTTCCTCCTTT...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATATTATTTCCAAAGAATaGGAATCCTGGGGTAGCGAG +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDIISKE*ESWGSE
Trigger: CTCGCTACCCCAGGATTCTCATTCTTTGGAAATAAT...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCCTTCTTTCTGTACCTaGTGCTGTTGGGCTGTAATT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFPSFCT*CCWAVI
Trigger: AATTACAGCCCAACAGCAGCAGGTACAGAAAGAAGG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATAGAAGTCAAGACGTTTaGTTCTACCTCATGTGTCAG +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDRSQDV*FYLMCQ
Trigger: CTGACACATGAGGTAGAAGCAAACGTCTTGACTTCT...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCATTTCACCATCTTCTaGGTGGATTTCACCCTCATC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFHFTIF*VDFTLI
Trigger: GATGAGGGTGAAATCCACGCAGAAGATGGTGAAATG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCATTCTGTCCTAAGATaGAGGCTACTCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFHSVLR*RLLWDS
Trigger: TGAATCCCAGAGTAGCCTCCATCTTAGGACAGAATG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCTGGCCAGTTATATCTaGTTACAGAAGGCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFLASYI*LQKASH
Trigger: ATGAGAGGCCTTCTGTAACCAGATATAACTGGCCAG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATATTCTTGGTTGTTGTTaGGATCATCTTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINILGCC*DHLGCS
Trigger: AGAACAGCCAAGATGATCCCAACAACAACCAAGAAT...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTGTTCTACTGGATGTTaGGGTGTCTTCCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFCSTGC*GVFLPS
Trigger: AGAAGGAAGGAAGACACCCCAACATCCAGTAGAACA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTAAGTCAGTGTTCTACTaGATGTTGGGGTGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFKSVFY*MLGCLP
Trigger: AGGAAGACACCCCAACATCCAGTAGAACACTGACTT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTTCCCTCACTTGAGTTaGGCTGTAGCTCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFFPHLS*AVALHF
Trigger: GAAATGAAGAGCTACAGCCCAACTCAAGTGAGGGAA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTACTCTTCTACCACGTaGGGAAGGAGTATACTTCAC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFYSSTT*GRSILH
Trigger: GTGAAGTATACTCCTTCCCCACGTGGTAGAAGAGTA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATTACTTTCCACTCTTCTaGGGGGAAACAGGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDYFPLF*GETGCF
Trigger: AAAACAACCTGTTTCCCCCCAGAAGAGTGGAAAGTA...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTTCACCTTCACCTTCTaGTTGAGTTTCACCTCCACT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFFTFTF*LSFTST
Trigger: AGTGGAGGTGAAACTCAACCAGAAGGTGAAGGTGAA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTCACCATCTTCTGCGTaGATTTCACCCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFSPSSA*ISPSSS
Trigger: TGAAGATGAGGGTGAAATCCACGCAGAAGATGGTGA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATCTTTCTCATCATTTTTaGCTTCACCGTGATTTTCAG +
Preference number: 4 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHLSHHF*LHRDFQ
Trigger: CTGAAAATCACGGTGAAGCCAAAAATGATGAGAAAG...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTATTCTCCACTGTCATaGTCAGTGTTGCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFYSPLS*SVLLHH
Trigger: GTGATGAAGCAACACTGAGCATGACAGTGGAGAATA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTAGAAGTCAAGACGTTTaGTTCTACCTCATGTGTCAG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFRSQDV*FYLMCQ
Trigger: CTGACACATGAGGTAGAAGCAAACGTCTTGACTTCT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCAAACACATACATCATaGCAAAAACGTGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFQTHTS*QKRAGP
Trigger: TGGTCCTGCACGTTTTTGGCATGATGTATGTGTTTG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCCTGTCTTCTCAGCTCTaGAAACTTGTCAGAATCCAA +
Preference number: 4 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITLSSQL*KLVRIQ
Trigger: TTGGATTCTGACAAGTTTCCAGAGCTGAGAAGACAG...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTCAATTTCCCCATGCTaGCCAGTTATATCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFSISPC*PVISGY
Trigger: GTAACCAGATATAACTGGCCAGCATGGGGAAATTGA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTGTACCTGCTGCTGTTaGGCTGTAATTATTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFCTCCC*AVIILG
Trigger: ACCAAGAATAATTACAGCCCAACAGCAGCAGGTACA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTCTTCATTTCTCCCCTaGGTGTTGGGGTATACTTTT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFSSFLP*VLGYTF
Trigger: AAAAGTATACCCCAACACCCAGGGGAGAAATGAAGA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTACTTTCCACTCTTCTaGGGGGAAACAGGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFYFPLF*GETGCF
Trigger: AAAACAACCTGTTTCCCCCCAGAAGAGTGGAAAGTA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000537259.5
3UTR CAA 72 bp AGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTaGGCATACAAAAATAGCATTGTCCCACTGGATCTC +
Preference number: 4 (lower is better)
Translates to: RRNQSCFIILSR*AYKNSIVPLDL
Trigger: GAGATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR GCA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCTATCAAATATGTTACTaGCCACAGAGCTTGACACAG +
Preference number: 4 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITYQICY*PQSLTQ
Trigger: CTGTGTCAAGCTCTGTGGGCAGTAACATATTTGATA...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR GCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTATCAAATATGTTACTaGCCACAGAGCTTGACACAG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFYQICY*PQSLTQ
Trigger: CTGTGTCAAGCTCTGTGGGCAGTAACATATTTGATA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTATTCTTGGTTGTTGTTaGGATCATCTTGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFILGCC*DHLGCS
Trigger: AGAACAGCCAAGATGATCCCAACAACAACCAAGAAT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTATGTGTCAGAAAAGTTaGGGTGCTATCAAACATTCC +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFMCQKS*GAIKHS
Trigger: GGAATGTTTGATAGCACCCCAACTTTTCTGACACAT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR TCA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCAGACTCACCAATAACTaGAGCTACAGTGATTACAAA +
Preference number: 4 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITRLTNN*SYSDYK
Trigger: TTTGTAATCACTGTAGCTTCAGTTATTGGTGAGTCT...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR TCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGTCTGTAGAATCTTTTaGGTTCACACCATTAGTGAA +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFVCRIF*VHTISE
Trigger: TTCACTAATGGTGTGAACTCAAAAGATTCTACAGAC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAAGGCTGTAATTATTCTTaGTTGTTGTTGGGATCATCT +
Preference number: 4 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKGCNYS*LLLGSS
Trigger: AGATGATCCCAACAACAACCAAGAATAATTACAGCC...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGGCTGTAATTATTCTTaGTTGTTGTTGGGATCATCT +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFGCNYS*LLLGSS
Trigger: AGATGATCCCAACAACAACCAAGAATAATTACAGCC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CCA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCCTTTCTCATCATTTTTaGCTTCACCGTGATTTTCAG +
Preference number: 4 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITLSHHF*LHRDFQ
Trigger: CTGAAAATCACGGTGAAGCCAAAAATGATGAGAAAG...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CCA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCTTTCTCATCATTTTTaGCTTCACCGTGATTTTCAG +
Preference number: 4 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFLSHHF*LHRDFQ
Trigger: CTGAAAATCACGGTGAAGCCAAAAATGATGAGAAAG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR GCA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAAGTTGTCATTGTGTTATaGATTCTTGGAATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKVVIVL*ILGISL
Trigger: AAGGGAAATTCCAAGAATGCATAACACAATGACAAC...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR GCA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCGTTGTCATTGTGTTATaGATTCTTGGAATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITVVIVL*ILGISL
Trigger: AAGGGAAATTCCAAGAATGCATAACACAATGACAAC...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS TCA 90 bp GTACTCTCCCTTGGGGTGGAGGTCTGGCAAGCTGGGAGGCAGCACTaGGGGACTAGGACTGAGCTCCTCTGGGAGCAGGGCTGTTGTGAG +
Preference number: 5 (lower is better)
Translates to: VLSLGVEVWQAGRQH*GTRTELLWEQGCCE
Trigger: CTCACAACAGCCCTGCTCCCAGAGGAGCTCAGTCCTAGTCCCTCAGTGCTGCCTCCCAGCTTGCCAGACCTCCACCCCAAGGGAGAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CCA 90 bp GGGACTAGGACTGAGCTCCTCTGGGAGCAGGGCTGTTGTGAGGCTTaGGGAGGGAGTGGTGAGCATGGCTGGGGTTGGCTTCACAACCAC +
Preference number: 5 (lower is better)
Translates to: GTRTELLWEQGCCEA*GGSGEHGWGWLHNH
Trigger: GTGGTTGTGAAGCCAACCCCAGCCATGCTCACCACTCCCTCCCCAAGCCTCACAACAGCCCTGCTCCCAGAGGAGCTCAGTCCTAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS TCA 90 bp ACAGACTGCCTTCTAAGGAGCTCAGCCACACCCCCTCAGCCTGAGTaGGGAAGGGTGATAGGGGGACCGACAGCTGAGATGGCCACAGAG +
Preference number: 5 (lower is better)
Translates to: TDCLLRSSATPPQPE*GRVIGGPTAEMATE
Trigger: CTCTGTGGCCATCTCAGCTGTCGGTCCCCCTATCACCCTTCCTCACTCAGGCTGAGGGGGTGTGGCTGAGCTCCTTAGAAGGCAGTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS CCA 90 bp GCCTGGATTCTCCTTCTGATCTCCCTTGATGTCTGGAACAGGGGCTaGTGTGACCGTGACCGCAGGGAGCTTGGCTGGCTCCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: AWILLLISLDVWNRG*CDRDRRELGWLLLF
Trigger: GAAGAGGAGGAGCCAGCCAAGCTCCCTGCGGTCACGGTCACACCAGCCCCTGTTCCAGACATCAAGGGAGATCAGAAGGAGAATCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000449142.2
ENST00000537259.5
ENST00000546330.1
CDS GCA 90 bp CACCTTCACCAGCAGTTTCGCCCTCTTCGCCTGGCATTTCACCTGTaGTCTCGGCCTCAGCCACATCTTCCTGACCGCCTGGATTCTCCT +
Preference number: 5 (lower is better)
Translates to: HLHQQFRPLRLAFHL*SRPQPHLPDRLDSP
Trigger: AGGAGAATCCAGGCGGTCAGGAAGATGTGGCTGAGGCCGAGAGCACAGGTGAAATGCCAGGCGAAGAGGGCGAAACTGCTGGTGAAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000449142.2
ENST00000537259.5
ENST00000546330.1
CDS GCA 90 bp GCAGGCAAGAGCCCATGTTGCCTTACAGGGAAATCTGAGCACGCATaGCTTGTCCAGGGTGAGAGGAACGAGGGCCCTCTGCTTCCCTCA +
Preference number: 5 (lower is better)
Translates to: AGKSPCCLTGKSEHA*LVQGERNEGPLLPS
Trigger: TGAGGGAAGCAGAGGGCCCTCGTTCCTCTCACCCTGGACAAGGCATGCGTGCTCAGATTTCCCTGTAAGGCAACATGGGCTCTTGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS CCA 90 bp GCTGCCTGTCATGGTGCTTATTGTCACCTGCCCCTCAGAGGTGGCTaGGGTATGCAACAGGACTGTTCCCTGGGGAGTCTTCGGGTTGCT +
Preference number: 5 (lower is better)
Translates to: AACHGAYCHLPLRGG*GMQQDCSLGSLRVA
Trigger: AGCAACCCGAAGACTCCCCAGGGAACAGTCCTGTTGCATACCCCAGCCACCTCTGAGGGGCAGGTGACAATAAGCACCATGACAGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CCA 90 bp ATCTTCCTGACCGCCTGGATTCTCCTTCTGATCTCCCTTGATGTCTaGAACAGGGGCTGGTGTGACCGTGACCGCAGGGAGCTTGGCTGG +
Preference number: 5 (lower is better)
Translates to: IFLTAWILLLISLDV*NRGWCDRDRRELGW
Trigger: CCAGCCAAGCTCCCTGCGGTCACGGTCACACCAGCCCCTGTTCCAGACATCAAGGGAGATCAGAAGGAGAATCCAGGCGGTCAGGAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000449142.2
ENST00000537259.5
ENST00000546330.1
CDS TCA 90 bp GTGATGGACCTGCATGGTCAGCTTTGCCCTGACCGTAGGGGTTGTTaGGGTGCTGGGTGCTGTGGAAGGTTTCTTTGCCAGCCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: VMDLHGQLCPDRRGC*GAGCCGRFLCQPPD
Trigger: GTCTGGAGGCTGGCAAAGAAACCTTCCACAGCACCCAGCACCTCAACAACCCCTACGGTCAGGGCAAAGCTGACCATGCAGGTCCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS GCA 90 bp GGTAGATGGTGCTGCGGATGGTGCTGTTGTGCAGAGAGGTCGAGCTaGTCCCTCGGGTCAGCAAGGACGGGAGCTTCAGCTTCTTGTTAT +
Preference number: 5 (lower is better)
Translates to: GRWCCGWCCCAERSS*SLGSARTGASASCY
Trigger: ATAACAAGAAGCTGAAGCTCCCGTCCTTGCTGACCCGAGGGAGCAGCTCGACCTCTCTGCACAACAGCACCATCCGCAGCACCATCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
CDS CCA 90 bp CTGTCAGCCACAGTGGGAACACGATGGGCAGAAGGAAGAGGTAAATaGCCTGCTTCTGCCTGGTTTCAGGCCAGTCCAGGGACAGAGGCT +
Preference number: 5 (lower is better)
Translates to: LSATVGTRWAEGRGK*PASAWFQASPGTEA
Trigger: AGCCTCTGTCCCTGGACTGGCCTGAAACCAGGCAGAAGCAGGCCATTTACCTCTTCCTTCTGCCCATCGTGTTCCCACTGTGGCTGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000449142.2
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CCA 90 bp CTTCCTAGACTCCTGCCTTCGGACGTCGGGGACTGTCAGCCACAGTaGGAACACGATGGGCAGAAGGAAGAGGTAAATGGCCTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: LPRLLPSDVGDCQPQ*EHDGQKEEVNGLLL
Trigger: CAGAAGCAGGCCATTTACCTCTTCCTTCTGCCCATCGTGTTCCCACTGTGGCTGACAGTCCCCGACGTCCGAAGGCAGGAGTCTAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261892.11
ENST00000434116.6
ENST00000449142.2
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS GCA 90 bp ACACTGAGTGCAGCTCAGAGACAGGATTTCATCCTTACAGTCAAGTaGCCTTCTGGAGCGGCCAGAGGCCTGGAGCCCAATGCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: TLSAAQRQDFILTVK*PSGAARGLEPNACS
Trigger: TGAGCAGGCATTGGGCTCCAGGCCTCTGGCCGCTCCAGAAGGGCACTTGACTGTAAGGATGAAATCCTGTCTCTGAGCTGCACTCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434116.6
ENST00000535950.1
ENST00000537259.5
CDS CCA 90 bp TGTTTCACCAACCTGCCTTCGGACGTCGGGGACTGTCAGCCACAGTaGGAACACGATGGGCAGAAGGAAGAGGTAAATGGCCTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: CFTNLPSDVGDCQPQ*EHDGQKEEVNGLLL
Trigger: CAGAAGCAGGCCATTTACCTCTTCCTTCTGCCCATCGTGTTCCCACTGTGGCTGACAGTCCCCGACGTCCGAAGGCAGGTTGGTGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339868.10
ENST00000399033.8
CDS CCA 90 bp CAGCCAGGGGGTATCCACAACCCTGAGACAGGGGGATGCAGGTGGTaGCACTTCACACTGAGTGCAGCTCAGAGACAGGATTTCATCCTT +
Preference number: 5 (lower is better)
Translates to: QPGGIHNPETGGCRW*HFTLSAAQRQDFIL
Trigger: AAGGATGAAATCCTGTCTCTGAGCTGCACTCAGTGTGAAGTGCCACCACCTGCATCCCCCTGTCTCAGGGTTGTGGATACCCCCTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000434116.6
ENST00000535950.1
ENST00000537259.5
CDS-3UTR CAA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCGCCGAGATCACGCCATaGCACACCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGAEITP*HTSLGN
Trigger: GTTGCCCAGGCTGGTGTGCAATGGCGTGATCTCGGC...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS TCA 90 bp GCTGCTCCTTCACCCAGACCTCGATATGCTTGTTCCACTTCATGGTaGACACATAGAAGGCATAGGCCAGCAGCAGCAGCAGGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: AAPSPRPRYACSTSW*THRRHRPAAAAGSP
Trigger: GGGAGAGCCTGCTGCTGCTGCTGGCCTATGCCTTCTATGTGTTCACCATGAAGTGGAACAAGCATATCGAGGTCTGGGTGAAGGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS GCA 90 bp CACCTTCACCAGCAGTTTCGCCCTCTTCGCCTGGCATTTCACCTGTaGTCTCGGCCTCAGCCACATCTTCCTTCTGGTTTGCTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: HLHQQFRPLRLAFHL*SRPQPHLPSGLLSA
Trigger: AGCAGAAAGCAAACCAGAAGGAAGATGTGGCTGAGGCCGAGAGCACAGGTGAAATGCCAGGCGAAGAGGGCGAAACTGCTGGTGAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539516.1
CDS-3UTR CAA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTGGCCACCAGGTGAGGTaGAGGATCTCTCGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: FWASSLWNDQGTVSVGACGHQVR*RISREK
Trigger: CTTCTCCCGAGAGATCCTCAACCTCACCTGGTGGCC...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCGTGACCGCAGGGAGCTaGGCTGGCTCCTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LLPPCNRCLHESGVETPPVTAGS*AGSSSS
Trigger: AGAAGAGGAGGAGCCAGCCAAGCTCCCTGCGGTCAC...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS TCA 90 bp GAACCGATGATCAACATTCCCAGTAAGAAGAGGAGGCGACTCCAATaGAGCCGCTTTGTCCGGAGTAACCACCTCTCTTGCGGCCCCATC +
Preference number: 5 (lower is better)
Translates to: EPMINIPSKKRRRLQ*SRFVRSNHLSCGPI
Trigger: GATGGGGCCGCAAGAGAGGTGGTTACTCCGGACAAAGCGGCTTCATTGGAGTCGCCTCCTCTTCTTACTGGGAATGTTGATCATCGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS TCA 90 bp TCCACAACCCTGAGACAGGGGGATGCAGGTGGTGGCACTTCACACTaGGTGCAGCTCAGAGACAGGATTTCATCCTTACAGTCAAGTGCC +
Preference number: 5 (lower is better)
Translates to: STTLRQGDAGGGTSH*VQLRDRISSLQSSA
Trigger: GGCACTTGACTGTAAGGATGAAATCCTGTCTCTGAGCTGCACTCAGTGTGAAGTGCCACCACCTGCATCCCCCTGTCTCAGGGTTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434116.6
ENST00000535950.1
ENST00000537259.5
CDS GCA 90 bp CCGACAGCTGAGATGGCCACAGAGAGGAAGAGCAAGCAAGACTCCTaGTCCTGGCCACAGGGACCATGTTGCTCTTCTTTTCACAATTGG +
Preference number: 5 (lower is better)
Translates to: PTAEMATERKSKQDS*SWPQGPCCSSFHNW
Trigger: CCAATTGTGAAAAGAAGAGCAACATGGTCCCTGTGGCCAGGAGCAGGAGTCTTGCTTGCTCTTCCTCTCTGTGGCCATCTCAGCTGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS CCA 90 bp AGGATTCCTAAGACTCCAGGCAGCAGTGAAGGCTTTGGTTTCTGCTaGGCTGCTGCCTGTCATGGTGCTTATTGTCACCTGCCCCTCAGA +
Preference number: 5 (lower is better)
Translates to: RIPKTPGSSEGFGFC*AAACHGAYCHLPLR
Trigger: TCTGAGGGGCAGGTGACAATAAGCACCATGACAGGCAGCAGCCCAGCAGAAACCAAAGCCTTCACTGCTGCCTGGAGTCTTAGGAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CCA 90 bp CACATCCTCGGAGATCTGCAGCTTGTCTGTGATGACACCCAGGGCTaGAACGAAGTACTCGTCGCAAACAATGGCCAAGGCCACAAACAC +
Preference number: 5 (lower is better)
Translates to: HILGDLQLVCDDTQG*NEVLVANNGQGHKH
Trigger: GTGTTTGTGGCCTTGGCCATTGTTTGCGACGAGTACTTCGTTCCAGCCCTGGGTGTCATCACAGACAAGCTGCAGATCTCCGAGGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CCA 90 bp TTTCTCTTCAGTTTCACCTTCACCAGCAGTTTCGCCCTCTTCGCCTaGCATTTCACCTGTGCTCTCGGCCTCAGCCACATCTTCCTGACC +
Preference number: 5 (lower is better)
Translates to: FLFSFTFTSSFALFA*HFTCALGLSHIFLT
Trigger: GGTCAGGAAGATGTGGCTGAGGCCGAGAGCACAGGTGAAATGCCAGGCGAAGAGGGCGAAACTGCTGGTGAAGGTGAAACTGAAGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000449142.2
ENST00000537259.5
ENST00000546330.1
CDS CCA 90 bp GGAACACGATGGGCAGAAGGAAGAGGTAAATGGCCTGCTTCTGCCTaGTTTCAGGCCAGTCCAGGGACAGAGGCTCTTCATTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: GTRWAEGRGKWPASA*FQASPGTEALHFPS
Trigger: AGAAGGGAAATGAAGAGCCTCTGTCCCTGGACTGGCCTGAAACCAGGCAGAAGCAGGCCATTTACCTCTTCCTTCTGCCCATCGTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000449142.2
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CCA 90 bp GTGGTTCCACATTGTTCTTTGAACCGTAACTACCCAGGGGCCTGCTaGCATCCATCTAAGCCTATCTCTAGCTGGGATTCCCTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: VVPHCSLNRNYPGAC*HPSKPISSWDSLAP
Trigger: GGGAGCCAGGGAATCCCAGCTAGAGATAGGCTTAGATGGATGCCAGCAGGCCCCTGGGTAGTTACGGTTCAAAGAACAATGTGGAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS-3UTR CAA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTGCAGCAGTGAAGGCTTaGGTTTCTGCTGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LRSITPYSSLRKNVRSQAAAVKA*VSAGLL
Trigger: CAGCAGCCCAGCAGAAACCAAAGCCTTCACTGCTGC...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCTGCTTTGGCCTGGGGTaGGGCTCTGGCCCCTTGATT +
Preference number: 5 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLCFGLG*GSGPLI
Trigger: AATCAAGGGGCCAGAGCCCAACCCCAGGCCAAAGCA...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATAGTGACCGCAGGGAGCTaGGCTGGCTCCTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PVLRPWLWKPSNAVASGIVTAGS*AGSSSS
Trigger: AGAAGAGGAGGAGCCAGCCAAGCTCCCTGCGGTCAC...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS TCA 90 bp GAAGCCGCTTTGTCCGGAGTAACCACCTCTCTTGCGGCCCCATCCTaGTCAATTTCCCCATGCTGGCCAGTTATATCTGGTTACAGAAGG +
Preference number: 5 (lower is better)
Translates to: EAALSGVTTSLAAPS*SISPCWPVISGYRR
Trigger: CCTTCTGTAACCAGATATAACTGGCCAGCATGGGGAAATTGATCAGGATGGGGCCGCAAGAGAGGTGGTTACTCCGGACAAAGCGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
CDS CCA 90 bp CAGCTGCAGAGTGTGGGAAAAGGCTGCCATGGGGGTTGTGACATCTaGATTCTGATCCTACGAGGCCTAGTTGTGGTGCCTAATTCCCAA +
Preference number: 5 (lower is better)
Translates to: QLQSVGKGCHGGCDI*ILILRGLVVVPNSQ
Trigger: TTGGGAATTAGGCACCACAACTAGGCCTCGTAGGATCAGAATCCAGATGTCACAACCCCCATGGCAGCCTTTTCCCACACTCTGCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539516.1
CDS CCA 90 bp TTTCTCTTCAGTTTCACCTTCACCAGCAGTTTCGCCCTCTTCGCCTaGCATTTCACCTGTGCTCTCGGCCTCAGCCACATCTTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: FLFSFTFTSSFALFA*HFTCALGLSHIFLL
Trigger: CAGAAGGAAGATGTGGCTGAGGCCGAGAGCACAGGTGAAATGCCAGGCGAAGAGGGCGAAACTGCTGGTGAAGGTGAAACTGAAGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539516.1
CDS CCA 90 bp TTTCTCTTCAGTTTCACCTTCACCAGCAGTTTCGCCCTCTTCGCCTaGCATTTCACCTGTGCTCTCGGCCTCAGCCACATCTTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: FLFSFTFTSSFALFA*HFTCALGLSHIFLA
Trigger: AGCAAGGAAGATGTGGCTGAGGCCGAGAGCACAGGTGAAATGCCAGGCGAAGAGGGCGAAACTGCTGGTGAAGGTGAAACTGAAGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544319.6
CDS-3UTR CAA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGTCGGAGATCTGCAGCTaGTCTGTGATGACACCCAGG +
Preference number: 5 (lower is better)
Translates to: PPCNRCLHESGVETPPLQSEICS*SVMTPR
Trigger: CCTGGGTGTCATCACAGACAAGCTGCAGATCTCCGA...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CAGCATTTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCTGCGGATGGTGCTGTaGTGCAGAGAGGTCGAGCTG +
Preference number: 5 (lower is better)
Translates to: QHFTVHHSLLQSEEERQILRMVL*CREVEL
Trigger: CAGCTCGACCTCTCTGCACAACAGCACCATCCGCAG...GATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAAATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCTTGGGCTCTGGCCCCTaGATTCAAGCTCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLLGSGP*IQALLL
Trigger: GAGGAGGAGAGCTTGAATCAAGGGGCCAGAGCCCAA...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTAGTGAGCGTAGGAGCTaGTCTTATAGCTGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: LRSITPYSSLRKNVRSQASERRS*SYSCCA
Trigger: GGCGCAGCAGCTATAAGACAAGCTCCTACGCTCACT...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCCAGAATTGCAGCGTGTGTTaGGGGCAGAGGTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: PPCNRCLHESGVETPPLQNCSVC*GQRSGR
Trigger: CCTTCCTGACCTCTGCCCCAAACACACGCTGCAATT...CTGGAGGGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS TCA 90 bp GCCAGAGGCCTGGAGCCCAATGCCTGCTCAAGCATAACTAGGTCTTaGCATGGTGAGATCAGCCAGGTTGGGGAAAGAAGTTTTGAAGCA +
Preference number: 5 (lower is better)
Translates to: ARGLEPNACSSITRS*HGEISQVGERSFEA
Trigger: TGCTTCAAAACTTCTTTCCCCAACCTGGCTGATCTCACCATGTCAAGACCTAGTTATGCTTGAGCAGGCATTGGGCTCCAGGCCTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS-3UTR CAA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTTCCAATGAAGCCGCTTaGTCCGGAGTAACCACCTCT +
Preference number: 5 (lower is better)
Translates to: LRSITPYSSLRKNVRSQASNEAA*SGVTTS
Trigger: AGAGGTGGTTACTCCGGACAAAGCGGCTTCATTGGA...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATATCCTCCTCCTTCTCCTaGGCAAGGCGAACTTCCCTC +
Preference number: 5 (lower is better)
Translates to: PVLRPWLWKPSNAVASGISSSFS*ARRTSL
Trigger: GAGGGAAGTTCGCCTTGCCAAGGAGAAGGAGGAGGA...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTGGTTTGCTTTCTGCTTaGGCCTGGGGTTGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTGLLSA*AWGWAL
Trigger: CAGAGCCCAACCCCAGGCCAAAGCAGAAAGCAAACC...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS GCA 90 bp TATGTGGTTCCACATTGTTCTTTGAACCGTAACTACCCAGGGGCCTaGTGGCATCCATCTAAGCCTATCTCTAGCTGGGATTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: YVVPHCSLNRNYPGA*WHPSKPISSWDSLA
Trigger: AGCCAGGGAATCCCAGCTAGAGATAGGCTTAGATGGATGCCAGCAGGCCCCTGGGTAGTTACGGTTCAAAGAACAATGTGGAACCACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS CCA 90 bp TGCGGCCCCATCCTGATCAATTTCCCCATGCTGGCCAGTTATATCTaGTTACAGAAGGCCTCTCATTCTGTCCTAAGATGGAGGCTACTC +
Preference number: 5 (lower is better)
Translates to: CGPILINFPMLASYI*LQKASHSVLRWRLL
Trigger: GAGTAGCCTCCATCTTAGGACAGAATGAGAGGCCTTCTGTAACCAGATATAACTGGCCAGCATGGGGAAATTGATCAGGATGGGGCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
CDS CCA 90 bp GCTGAGATGGCCACAGAGAGGAAGAGCAAGCAAGACTCCTGCTCCTaGCCACAGGGACCATGTTGCTCTTCTTTTCACAATTGGACTAAA +
Preference number: 5 (lower is better)
Translates to: AEMATERKSKQDSCS*PQGPCCSSFHNWTK
Trigger: TTTAGTCCAATTGTGAAAAGAAGAGCAACATGGTCCCTGTGGCCAGGAGCAGGAGTCTTGCTTGCTCTTCCTCTCTGTGGCCATCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS-3UTR CAA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTACAACCCTTCAGACCTaGACATCTGGCTGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: FWASSLWNDQGTVSVGACTTLQT*TSGCLL
Trigger: GAGAAGACAGCCAGATGTCAAGGTCTGAAGGGTTGT...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTAGTGAGCGTAGGAGCTaGTCTTATAGCTGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTSERRS*SYSCCA
Trigger: GGCGCAGCAGCTATAAGACAAGCTCCTACGCTCACT...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCCACATCTGCATCTTTaGGGCCAGCAGCCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: LLPPCNRCLHESGVETPPPHLHL*GQQPLE
Trigger: TTCCAAAGGCTGCTGGCCCAAAAGATGCAGATGTGG...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CAGCATTTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCAATTGCAGCGTGTGTTaGGGGCAGAGGTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: QHFTVHHSLLQSEEERQINCSVC*GQRSGR
Trigger: CCTTCCTGACCTCTGCCCCAAACACACGCTGCAATT...GATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAAATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATAAGGCAGGAGAATTGCTaGAACCGGGGAGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: PVLRPWLWKPSNAVASGIRQENC*NRGGEG
Trigger: ACCTTCACCTCCCCGGTTCAAGCAATTCTCCTGCCT...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS TCA 90 bp TTCCTGCTGTTCACTCACCTGGTGAGCCCACCACACCATGAGGTATaGGAACATGGCTATCCACATGATAGATCCCAGGAAGGTGAAAAC +
Preference number: 5 (lower is better)
Translates to: FLLFTHLVSPPHHEV*EHGYPHDRSQEGEN
Trigger: GTTTTCACCTTCCTGGGATCTATCATGTGGATAGCCATGTTCTCATACCTCATGGTGTGGTGGGCTCACCAGGTGAGTGAACAGCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS GCA 90 bp TGGGATTCCCTGGCTCCCTACATGGTTAGAAAGAAAGTCACCTCTTaGCCTCTTAAGGACCTCACTGAGGCACAGACTACAATGGAGACA +
Preference number: 5 (lower is better)
Translates to: WDSLAPYMVRKKVTS*PLKDLTEAQTTMET
Trigger: TGTCTCCATTGTAGTCTGTGCCTCAGTGAGGTCCTTAAGAGGGCAAGAGGTGACTTTCTTTCTAACCATGTAGGGAGCCAGGGAATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS CCA 90 bp TGTCATGAATGTGGACGGCACGTAAGTGCCTACTCTTCTACCACGTaGGGAAGGAGTATACTTCACCTTTTCCCTCACTTGAGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: CHECGRHVSAYSSTT*GRSILHLFPHLSWA
Trigger: AGCCCAACTCAAGTGAGGGAAAAGGTGAAGTATACTCCTTCCCCACGTGGTAGAAGAGTAGGCACTTACGTGCCGTCCACATTCATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CCA 90 bp CCTTGGCAAGGCGAACTGCAAATGAGACAGGACATACATCTTACCTaGAATTGTAGGATCATCCCTGCCACGCCCTTTCAGTTAGGACAG +
Preference number: 5 (lower is better)
Translates to: PWQGELQMRQDIHLT*NCRIIPATPFQLGQ
Trigger: CTGTCCTAACTGAAAGGGCGTGGCAGGGATGATCCTACAATTCCAGGTAAGATGTATGTCCTGTCTCATTTGCAGTTCGCCTTGCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539516.1
CDS-3UTR CAA 90 bp CAGCATTTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCTCCAATGAAGCCGCTTaGTCCGGAGTAACCACCTCT +
Preference number: 5 (lower is better)
Translates to: QHFTVHHSLLQSEEERQISNEAA*SGVTTS
Trigger: AGAGGTGGTTACTCCGGACAAAGCGGCTTCATTGGA...GATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAAATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTCAGACCTCGATATGCTaGTTCCACTTCATGGTGAAC +
Preference number: 5 (lower is better)
Translates to: LRSITPYSSLRKNVRSQAQTSIC*FHFMVN
Trigger: GTTCACCATGAAGTGGAACAAGCATATCGAGGTCTG...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCAAGGAGGAGACAAAATaGCAGCGTGTGTTTGGGGCA +
Preference number: 5 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLKEETK*QRVFGA
Trigger: TGCCCCAAACACACGCTGCAATTTTGTCTCCTCCTT...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGCCGAGATCACGCCATaGCACACCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: YTSYLGSSTALFSPCCHCAEITP*HTSLGN
Trigger: GTTGCCCAGGCTGGTGTGCAATGGCGTGATCTCGGC...ACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR CAA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCTTAGTGCCCAGAATTTaGGTATTGGGACCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLLVPRI*VLGPPS
Trigger: GGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS TCA 90 bp CCCTATTGTTTCACCAACCTGGTGAGCCCACCACACCATGAGGTATaGGAACATGGCTATCCACATGATAGATCCCAGGAAGGTGAAAAC +
Preference number: 5 (lower is better)
Translates to: PYCFTNLVSPPHHEV*EHGYPHDRSQEGEN
Trigger: GTTTTCACCTTCCTGGGATCTATCATGTGGATAGCCATGTTCTCATACCTCATGGTGTGGTGGGCTCACCAGGTTGGTGAAACAATAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261892.11
ENST00000449142.2
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CCA 90 bp ATCCATCTAAGCCTATCTCTAGCTGGGATTCCCTGGCTCCCTACATaGTTAGAAAGAAAGTCACCTCTTGCCCTCTTAAGGACCTCACTG +
Preference number: 5 (lower is better)
Translates to: IHLSLSLAGIPWLPT*LERKSPLALLRTSL
Trigger: CAGTGAGGTCCTTAAGAGGGCAAGAGGTGACTTTCTTTCTAACCATGTAGGGAGCCAGGGAATCCCAGCTAGAGATAGGCTTAGATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS-3UTR CAA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTGTGTTCTACTGGATGTaGGGGTGTCTTCCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTVFYWM*GCLPSF
Trigger: GAAGGAAGGAAGACACCCCAACATCCAGTAGAACAC...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATACACCTTTTCCCTCACTaGAGTTGGGCTGTAGCTCTT +
Preference number: 5 (lower is better)
Translates to: PVLRPWLWKPSNAVASGIHLFPH*SWAVAL
Trigger: AAGAGCTACAGCCCAACTCAAGTGAGGGAAAAGGTG...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGGGCCACCAGGTGAGGTaGAGGATCTCTCGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMGHQVR*RISREK
Trigger: CTTCTCCCGAGAGATCCTCAACCTCACCTGGTGGCC...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATGCCCCATCGCCCGGCTaGCTGAGGTCTTCTAAGGCC +
Preference number: 5 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDAPSPG*LRSSKA
Trigger: GGCCTTAGAAGACCTCAGCAAGCCGGGCGATGGGGC...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGCTGCGGATGGTGCTGTaGTGCAGAGAGGTCGAGCTG +
Preference number: 5 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMLRMVL*CREVEL
Trigger: CAGCTCGACCTCTCTGCACAACAGCACCATCCGCAG...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATGCCGAGATCACGCCATaGCACACCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINAEITP*HTSLGN
Trigger: GTTGCCCAGGCTGGTGTGCAATGGCGTGATCTCGGC...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR CAA 90 bp CAGCATTTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCTTAGTGCCCAGAATTTaGGTATTGGGACCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: QHFTVHHSLLQSEEERQILVPRI*VLGPPS
Trigger: GGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA...GATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAAATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS GCA 90 bp AGAGCTGTTCATGTCAGCATTTCTATTTCCAGGAATGTGGACACTTaGTGTGTGCCAGGAACTAAGAGGCTGGAGGTGAAGTATGAGCAG +
Preference number: 5 (lower is better)
Translates to: RAVHVSISISRNVDT*CVPGTKRLEVKYEQ
Trigger: CTGCTCATACTTCACCTCCAGCCTCTTAGTTCCTGGCACACAGCAAGTGTCCACATTCCTGGAAATAGAAATGCTGACATGAACAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS CCA 90 bp TCCTGCTCCTGGCCACAGGGACCATGTTGCTCTTCTTTTCACAATTaGACTAAAAGTTACCTACACCAGATCTGCTGCTCACTGTCATTC +
Preference number: 5 (lower is better)
Translates to: SCSWPQGPCCSSFHN*TKSYLHQICCSLSF
Trigger: GAATGACAGTGAGCAGCAGATCTGGTGTAGGTAACTTTTAGTCCAATTGTGAAAAGAAGAGCAACATGGTCCCTGTGGCCAGGAGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS-3UTR CAA 90 bp TTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTCTCAGCTCTGGAAACTaGTCAGAATCCAATATCTCA +
Preference number: 5 (lower is better)
Translates to: LRSITPYSSLRKNVRSQALSSGN*SESNIS
Trigger: TGAGATATTGGATTCTGACAAGTTTCCAGAGCTGAG...AGCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTTATTCTTGGTTGTTGTaGGGATCATCTTGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: FWASSLWNDQGTVSVGACYSWLL*GSSWLF
Trigger: GAACAGCCAAGATGATCCCAACAACAACCAAGAATA...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCCATGTGTCAGAAAAGTaGGGGTGCTATCAAACATTC +
Preference number: 5 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGHVSEK*GCYQTF
Trigger: GAATGTTTGATAGCACCCCAACTTTTCTGACACATG...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGTCGGAGATCTGCAGCTaGTCTGTGATGACACCCAGG +
Preference number: 5 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLSEICS*SVMTPR
Trigger: CCTGGGTGTCATCACAGACAAGCTGCAGATCTCCGA...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAAGCCCCATCGCCCGGCTaGCTGAGGTCTTCTAAGGCC +
Preference number: 5 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKAPSPG*LRSSKA
Trigger: GGCCTTAGAAGACCTCAGCAAGCCGGGCGATGGGGC...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp ATTAGGGTCACAAGAGATACAGTAACTTCTGCATGGTCTTCTGATCCATGCCCACCCAGAATTTTGGTATaGGGACCTCCCTCCCACAAG +
Preference number: 5 (lower is better)
Translates to: IRVTRDTVTSAWSSDPCPPRILV*GPPSHK
Trigger: CTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGG...TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGTATCTCTTGTGACCCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS TCA 90 bp AACAACATAGAAACTGCACGAATTCACTTGATCCTCGAGATTCCCTaGGTACCGGAGATTGATCCTGAAGGAAAGTGTCGTTGGGACCTG +
Preference number: 5 (lower is better)
Translates to: NNIETARIHLILEIP*VPEIDPEGKCRWDL
Trigger: CAGGTCCCAACGACACTTTCCTTCAGGATCAATCTCCGGTACTCAGGGAATCTCGAGGATCAAGTGAATTCGTGCAGTTTCTATGTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS CCA 90 bp GGATGTTGGGGTGTCTTCCTTCCTTCTTTCTGTACCTGCTGCTGTTaGGCTGTAATTATTCTTGGTTGTTGTTGGGATCATCTTGGCTGT +
Preference number: 5 (lower is better)
Translates to: GCWGVFLPSFCTCCC*AVIILGCCWDHLGC
Trigger: ACAGCCAAGATGATCCCAACAACAACCAAGAATAATTACAGCCCAACAGCAGCAGGTACAGAAAGAAGGAAGGAAGACACCCCAACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS-3UTR CAA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCCTCAGCTCTGGAAACTaGTCAGAATCCAATATCTCA +
Preference number: 5 (lower is better)
Translates to: LLPPCNRCLHESGVETPPLSSGN*SESNIS
Trigger: TGAGATATTGGATTCTGACAAGTTTCCAGAGCTGAG...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CTACTGCCTCCATGTAATAGATGTCTGCATGAGTCAGGGGTAGAAACTCCACCCGTTGTTGGGATCATCTaGGCTGTTCTTTTAGGCATA +
Preference number: 5 (lower is better)
Translates to: LLPPCNRCLHESGVETPPVVGII*AVLLGI
Trigger: TATGCCTAAAAGAACAGCCAAGATGATCCCAACAAC...GGGTGGAGTTTCTACCCCTGACTCATGCAGACATCTATTACATGGAGGCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TTTTGGGCCAGCAGCCTTTGGAATGATCAGGGAACAGTGAGCGTAGGAGCTTGTAATTATTCTTGGTTGTaGTTGGGATCATCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: FWASSLWNDQGTVSVGACNYSWL*LGSSWL
Trigger: CAGCCAAGATGATCCCAACAACAACCAAGAATAATT...ACAAGCTCCTACGCTCACTGTTCCCTGATCATTCCAAAGGCTGCTGGCCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TTAGTGCCCAGAATTTTGGTATTGGGACCTCCCTCCCACAAGCATTGCCTTCTCTTTGTCTGCTTGAAGTaGAGGTGTAGTAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: LVPRILVLGPPSHKHCLLFVCLK*RCSKSV
Trigger: CACTGACTTACTACACCTCAACTTCAAGCAGACAAA...GAGAAGGCAATGCTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGGCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp ACCAGATGTGGCGCTACTGACTTTGGACTCTTTAGAATGACTTCCCTTCCCACTTTTCCCTCACTTGAGTaGGGCTGTAGCTCTTCATTT +
Preference number: 5 (lower is better)
Translates to: TRCGATDFGLFRMTSLPTFPSLE*GCSSSF
Trigger: AAATGAAGAGCTACAGCCCAACTCAAGTGAGGGAAA...AGTGGGAAGGGAAGTCATTCTAAAGAGTCCAAAGTCAGTAGCGCCACATCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATGCAGCAGTGAAGGCTTaGGTTTCTGCTGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINAAVKA*VSAGLL
Trigger: CAGCAGCCCAGCAGAAACCAAAGCCTTCACTGCTGC...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp ATTAGGGTCACAAGAGATACAGTAACTTCTGCATGGTCTTCTGATCCATGCCCAGGGAGCTTCAGCTTCTaGTTATCCTGTAGCTCATCC +
Preference number: 5 (lower is better)
Translates to: IRVTRDTVTSAWSSDPCPGSFSF*LSCSSS
Trigger: GGATGAGCTACAGGATAACAAGAAGCTGAAGCTCCC...TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGTATCTCTTGTGACCCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGTGACCGCAGGGAGCTaGGCTGGCTCCTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFVTAGS*AGSSSS
Trigger: AGAAGAGGAGGAGCCAGCCAAGCTCCCTGCGGTCAC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGCCCAGAATTTTGGTATaGGGACCTCCCTCCCACAAG +
Preference number: 5 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVPRILV*GPPSHK
Trigger: CTTGTGGGAGGGAGGTCCCAATACCAAAATTCTGGG...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS CCA 90 bp CTATTTGTCTGCTTGAAGTTGAGGTGTAGTAAGTCAGTGTTCTACTaGATGTTGGGGTGTCTTCCTTCCTTCTTTCTGTACCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LFVCLKLRCSKSVFY*MLGCLPSFFLYLLL
Trigger: CAGCAGCAGGTACAGAAAGAAGGAAGGAAGACACCCCAACATCCAGTAGAACACTGACTTACTACACCTCAACTTCAAGCAGACAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS-3UTR CAA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGACAACCCTTCAGACCTaGACATCTGGCTGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLTTLQT*TSGCLL
Trigger: GAGAAGACAGCCAGATGTCAAGGTCTGAAGGGTTGT...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCCCAGGCTGTAATTATTCTTGGTaGTTGTTGGGATCATCTTGG +
Preference number: 5 (lower is better)
Translates to: FTVHHSLLQSEEERQIPGCNYSW*LLGSSW
Trigger: CCAAGATGATCCCAACAACAACCAAGAATAATTACA...GCCTGGGATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATATTTGTCTGCTTGAAGTaGAGGTGTAGTAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: PVLRPWLWKPSNAVASGIFVCLK*RCSKSV
Trigger: CACTGACTTACTACACCTCAACTTCAAGCAGACAAA...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGCACCTTTTCCCTCACTaGAGTTGGGCTGTAGCTCTT +
Preference number: 5 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVHLFPH*SWAVAL
Trigger: AAGAGCTACAGCCCAACTCAAGTGAGGGAAAAGGTG...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATTGGGGAGTCTTCGGGTaGCTCTTTCCCACTAACCCC +
Preference number: 5 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDWGVFG*LFPTNP
Trigger: GGGGTTAGTGGGAAAGAGCAACCCGAAGACTCCCCA...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATATGGCTGGGGCTGTTTaGATGGCTGATACACTGGTC +
Preference number: 5 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHMAGAV*MADTLV
Trigger: GACCAGTGTATCAGCCATCAAAACAGCCCCAGCCAT...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGGCCACCAGGTGAGGTaGAGGATCTCTCGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFGHQVR*RISREK
Trigger: CTTCTCCCGAGAGATCCTCAACCTCACCTGGTGGCC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGGGGAGCTTCAGCTTCTaGTTATCCTGTAGCTCATCC +
Preference number: 5 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVGSFSF*LSCSSS
Trigger: GGATGAGCTACAGGATAACAAGAAGCTGAAGCTCCC...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCTGCGGATGGTGCTGTaGTGCAGAGAGGTCGAGCTG +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFLRMVL*CREVEL
Trigger: CAGCTCGACCTCTCTGCACAACAGCACCATCCGCAG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAATGCTTTGGCCTGGGGTaGGGCTCTGGCCCCTTGATT +
Preference number: 5 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKCFGLG*GSGPLI
Trigger: AATCAAGGGGCCAGAGCCCAACCCCAGGCCAAAGCA...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTGCTTTGGCCTGGGGTaGGGCTCTGGCCCCTTGATT +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFCFGLG*GSGPLI
Trigger: AATCAAGGGGCCAGAGCCCAACCCCAGGCCAAAGCA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATGGTTTGCTTTCTGCTTaGGCCTGGGGTTGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDGLLSA*AWGWAL
Trigger: CAGAGCCCAACCCCAGGCCAAAGCAGAAAGCAAACC...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCCGCCTATCCCAACCTTaGCCCCCAGTTATCTCATTT +
Preference number: 5 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVRLSQP*PPVISF
Trigger: AAATGAGATAACTGGGGGCAAAGGTTGGGATAGGCG...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGAAGGAGGAGACAAAATaGCAGCGTGTGTTTGGGGCA +
Preference number: 5 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVKEETK*QRVFGA
Trigger: TGCCCCAAACACACGCTGCAATTTTGTCTCCTCCTT...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATAGGCAGGAGAATTGCTaGAACCGGGGAGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINRQENC*NRGGEG
Trigger: ACCTTCACCTCCCCGGTTCAAGCAATTCTCCTGCCT...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS TCA 90 bp AAAACTACAAGCAACTGGCCCCACAATCTCCCACATAACAAGCTGTaGGAAGTCAGACAGATTTGTCTGTTCAGTTCAAAGCATCCTCCT +
Preference number: 5 (lower is better)
Translates to: KTTSNWPHNLPHNKL*EVRQICLFSSKHPP
Trigger: AGGAGGATGCTTTGAACTGAACAGACAAATCTGTCTGACTTCTCACAGCTTGTTATGTGGGAGATTGTGGGGCCAGTTGCTTGTAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS GCA 90 bp TCTACTGGATGTTGGGGTGTCTTCCTTCCTTCTTTCTGTACCTGCTaGTGTTGGGCTGTAATTATTCTTGGTTGTTGTTGGGATCATCTT +
Preference number: 5 (lower is better)
Translates to: STGCWGVFLPSFCTC*CWAVIILGCCWDHL
Trigger: AAGATGATCCCAACAACAACCAAGAATAATTACAGCCCAACAGCAGCAGGTACAGAAAGAAGGAAGGAAGACACCCCAACATCCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS GCA 90 bp TGTTCTACTGGATGTTGGGGTGTCTTCCTTCCTTCTTTCTGTACCTaGTGCTGTTGGGCTGTAATTATTCTTGGTTGTTGTTGGGATCAT +
Preference number: 5 (lower is better)
Translates to: CSTGCWGVFLPSFCT*CCWAVIILGCCWDH
Trigger: ATGATCCCAACAACAACCAAGAATAATTACAGCCCAACAGCAGCAGGTACAGAAAGAAGGAAGGAAGACACCCCAACATCCAGTAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS-3UTR CAA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGGTGTTCTACTGGATGTaGGGGTGTCTTCCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMVFYWM*GCLPSF
Trigger: GAAGGAAGGAAGACACCCCAACATCCAGTAGAACAC...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAATGGGGAGTCTTCGGGTaGCTCTTTCCCACTAACCCC +
Preference number: 5 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKWGVFG*LFPTNP
Trigger: GGGGTTAGTGGGAAAGAGCAACCCGAAGACTCCCCA...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTGGGGAGTCTTCGGGTaGCTCTTTCCCACTAACCCC +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFWGVFG*LFPTNP
Trigger: GGGGTTAGTGGGAAAGAGCAACCCGAAGACTCCCCA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGCAGCAGTGAAGGCTTaGGTTTCTGCTGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFAAVKA*VSAGLL
Trigger: CAGCAGCCCAGCAGAAACCAAAGCCTTCACTGCTGC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGCAGACCTCGATATGCTaGTTCCACTTCATGGTGAAC +
Preference number: 5 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLQTSIC*FHFMVN
Trigger: GTTCACCATGAAGTGGAACAAGCATATCGAGGTCTG...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAATCCTCCTCCTTCTCCTaGGCAAGGCGAACTTCCCTC +
Preference number: 5 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKSSSFS*ARRTSL
Trigger: GAGGGAAGTTCGCCTTGCCAAGGAGAAGGAGGAGGA...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTCCTCCTCCTTCTCCTaGGCAAGGCGAACTTCCCTC +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFSSSFS*ARRTSL
Trigger: GAGGGAAGTTCGCCTTGCCAAGGAGAAGGAGGAGGA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCTTGGGCTCTGGCCCCTaGATTCAAGCTCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITLGSGP*IQALLL
Trigger: GAGGAGGAGAGCTTGAATCAAGGGGCCAGAGCCCAA...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTTGGGCTCTGGCCCCTaGATTCAAGCTCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFLGSGP*IQALLL
Trigger: GAGGAGGAGAGCTTGAATCAAGGGGCCAGAGCCCAA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGGTTTGCTTTCTGCTTaGGCCTGGGGTTGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFGLLSA*AWGWAL
Trigger: CAGAGCCCAACCCCAGGCCAAAGCAGAAAGCAAACC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCTCCACTCAACTGTCATaGTTGGGTGAGAACATGCTG +
Preference number: 5 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVSTQLS*LGENML
Trigger: CAGCATGTTCTCACCCAACAATGACAGTTGAGTGGA...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR CAA 90 bp CCTGTTCTTAGGCCTTGGCTATGGAAACCCAGCAATGCAGTAGCATCAGGAATACTCACCATGTTGTCATaGTGTTATGCATTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: PVLRPWLWKPSNAVASGILTMLS*CYAFLE
Trigger: TTCCAAGAATGCATAACACAATGACAACATGGTGAG...TATTCCTGATGCTACTGCATTGCTGGGTTTCCATAGCCAAGGCCTAAGAACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTAGCAAGGACGGGAGCTaGCTGAGGTCTTCTAAGGCC +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFSKDGS*LRSSKA
Trigger: GGCCTTAGAAGACCTCAGCAAGCTCCCGTCCTTGCT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS TCA 90 bp AGAGATACAGTAACTTCTGCATGGTCTTCTGATCCATGCCCATTGTaGGCAAGAGTGACTGATTCAGACAGATACAGGACAGGATATGAT +
Preference number: 5 (lower is better)
Translates to: RDTVTSAWSSDPCPL*ARVTDSDRYRTGYD
Trigger: ATCATATCCTGTCCTGTATCTGTCTGAATCAGTCACTCTTGCTCACAATGGGCATGGATCAGAAGACCATGCAGAAGTTACTGTATCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000449142.2
CDS CCA 90 bp TTCTGTACCTGCTGCTGTTGGGCTGTAATTATTCTTGGTTGTTGTTaGGATCATCTTGGCTGTTCTTTTAGGCATACTGGGGATATTCTC +
Preference number: 5 (lower is better)
Translates to: FCTCCCWAVIILGCC*DHLGCSFRHTGDIL
Trigger: GAGAATATCCCCAGTATGCCTAAAAGAACAGCCAAGATGATCCCAACAACAACCAAGAATAATTACAGCCCAACAGCAGCAGGTACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS-3UTR CAA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATCTGTACCTGCTGCTGTaGGGCTGTAATTATTCTTGG +
Preference number: 5 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHLYLLL*GCNYSW
Trigger: CCAAGAATAATTACAGCCCAACAGCAGCAGGTACAG...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTTCCCTCACTTGAGTaGGGCTGTAGCTCTTCATTT +
Preference number: 5 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVFPSLE*GCSSSF
Trigger: AAATGAAGAGCTACAGCCCAACTCAAGTGAGGGAAA...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTCGGAGATCTGCAGCTaGTCTGTGATGACACCCAGG +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFSEICS*SVMTPR
Trigger: CCTGGGTGTCATCACAGACAAGCTGCAGATCTCCGA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp TCCTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCACCTTCACCTTCTGGTaGAGTTTCACCTCCACTTTT +
Preference number: 5 (lower is better)
Translates to: SFTLATLEVVLHFSHHVVTFTFW*SFTSTF
Trigger: AAAAGTGGAGGTGAAACTCAACCAGAAGGTGAAGGT...GACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TCCCTCAAGGTGACCACTGATGGAGACAACATGAATTTGCATGTTCTAATAAATCGCCTATCCCAACCTTaGCCCCCAGTTATCTCATTT +
Preference number: 5 (lower is better)
Translates to: SLKVTTDGDNMNLHVLINRLSQP*PPVISF
Trigger: AAATGAGATAACTGGGGGCAAAGGTTGGGATAGGCG...ATTTATTAGAACATGCAAATTCATGTTGTCTCCATCAGTGGTCACCTTGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CAGCATTTTACGGTCCATCACTCCTTACTCCAGTCTGAGGAAGAACGTCAGATCACTTTTCTCACCATGTaGTCATTGTGTTATGCATTC +
Preference number: 5 (lower is better)
Translates to: QHFTVHHSLLQSEEERQITFLTM*SLCYAF
Trigger: GAATGCATAACACAATGACAACATGGTGAGAAAAGT...GATCTGACGTTCTTCCTCAGACTGGAGTAAGGAGTGATGGACCGTAAAATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS GCA 90 bp CTCCATTATTCTCTTAAGAGAGTTGGTTTCGAGTATTTTATAGGTTaGTGTAATGTCACTGTCTTTCACTGTTGTCCTGGGGGTGATCGC +
Preference number: 5 (lower is better)
Translates to: LHYSLKRVGFEYFIG*CNVTVFHCCPGGDR
Trigger: GCGATCACCCCCAGGACAACAGTGAAAGACAGTGACATTACAGCAACCTATAAAATACTCGAAACCAACTCTCTTAAGAGAATAATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS-3UTR CAA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGACTCTGGGATTCAGGTaGGTGATCAGAGAAGATTTC +
Preference number: 5 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMTLGFR*VIREDF
Trigger: GAAATCTTCTCTGATCACCAACCTGAATCCCAGAGT...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTCCAATGAAGCCGCTTaGTCCGGAGTAACCACCTCT +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFSNEAA*SGVTTS
Trigger: AGAGGTGGTTACTCCGGACAAAGCGGCTTCATTGGA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGGTTGTTGGGATCATCTaGGCTGTTCTTTTAGGCATA +
Preference number: 5 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLVVGII*AVLLGI
Trigger: TATGCCTAAAAGAACAGCCAAGATGATCCCAACAAC...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCATGGCTGGGGCTGTTTaGATGGCTGATACACTGGTC +
Preference number: 5 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITMAGAV*MADTLV
Trigger: GACCAGTGTATCAGCCATCAAAACAGCCCCAGCCAT...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTATGGCTGGGGCTGTTTaGATGGCTGATACACTGGTC +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFMAGAV*MADTLV
Trigger: GACCAGTGTATCAGCCATCAAAACAGCCCCAGCCAT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGACCTTCACCTTCTGGTaGAGTTTCACCTCCACTTTT +
Preference number: 5 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMTFTFW*SFTSTF
Trigger: AAAAGTGGAGGTGAAACTCAACCAGAAGGTGAAGGT...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp ATTAGGGTCACAAGAGATACAGTAACTTCTGCATGGTCTTCTGATCCATGCCCAAACGTGTCCCTTAACTaGATTCTAGTAAAAGCAGCA +
Preference number: 5 (lower is better)
Translates to: IRVTRDTVTSAWSSDPCPNVSLN*ILVKAA
Trigger: TGCTGCTTTTACTAGAATCAAGTTAAGGGACACGTT...TGGGCATGGATCAGAAGACCATGCAGAAGTTACTGTATCTCTTGTGACCCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS TCA 90 bp CTACACCTTTCTCATCATTTTTGGCTTCACCGTGATTTTCAGCACTaGGTTCCTGGCTTTCAGTTTCACCTTCATTACCTTTCATTTCAC +
Preference number: 5 (lower is better)
Translates to: LHLSHHFWLHRDFQH*VPGFQFHLHYLSFH
Trigger: GTGAAATGAAAGGTAATGAAGGTGAAACTGAAAGCCAGGAACTCAGTGCTGAAAATCACGGTGAAGCCAAAAATGATGAGAAAGGTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000449142.2
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS-3UTR CAA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGAATTATTCTTGGTTGTaGTTGGGATCATCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLNYSWL*LGSSWL
Trigger: CAGCCAAGATGATCCCAACAACAACCAAGAATAATT...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGTGTTCTACTGGATGTaGGGGTGTCTTCCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFVFYWM*GCLPSF
Trigger: GAAGGAAGGAAGACACCCCAACATCCAGTAGAACAC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCACCTTTTCCCTCACTaGAGTTGGGCTGTAGCTCTT +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFHLFPH*SWAVAL
Trigger: AAGAGCTACAGCCCAACTCAAGTGAGGGAAAAGGTG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGCATGTGTCAGAAAAGTaGGGGTGCTATCAAACATTC +
Preference number: 5 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMHVSEK*GCYQTF
Trigger: GAATGTTTGATAGCACCCCAACTTTTCTGACACATG...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp ACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGCTCACCATGTTGTCATaGTGTTATGCATTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: TLATLEVVLHFSHHVVIVLTMLS*CYAFLE
Trigger: TTCCAAGAATGCATAACACAATGACAACATGGTGAG...CACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR CAA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGAACGTGTCCCTTAACTaGATTCTAGTAAAAGCAGCA +
Preference number: 5 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLNVSLN*ILVKAA
Trigger: TGCTGCTTTTACTAGAATCAAGTTAAGGGACACGTT...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAACTGTACCTGCTGCTGTaGGGCTGTAATTATTCTTGG +
Preference number: 5 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKLYLLL*GCNYSW
Trigger: CCAAGAATAATTACAGCCCAACAGCAGCAGGTACAG...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCTGTACCTGCTGCTGTaGGGCTGTAATTATTCTTGG +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFLYLLL*GCNYSW
Trigger: CCAAGAATAATTACAGCCCAACAGCAGCAGGTACAG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGTTACTATTTGTCTGCTaGAAGTTGAGGTGTAGTAAG +
Preference number: 5 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLLLFVC*KLRCSK
Trigger: CTTACTACACCTCAACTTCAAGCAGACAAATAGTAA...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCAGACCTCGATATGCTaGTTCCACTTCATGGTGAAC +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFQTSIC*FHFMVN
Trigger: GTTCACCATGAAGTGGAACAAGCATATCGAGGTCTG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp TCACCATGTTGTCATTGTGTTATGCATTCTTGGAATTTCCCTTTTGTAATTACCTCCACTCAACTGTCATaGTTGGGTGAGAACATGCTG +
Preference number: 5 (lower is better)
Translates to: SPCCHCVMHSWNFPFVITSTQLS*LGENML
Trigger: CAGCATGTTCTCACCCAACAATGACAGTTGAGTGGA...GGTAATTACAAAAGGGAAATTCCAAGAATGCATAACACAATGACAACATGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR CAA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATCTCACCATGTTGTCATaGTGTTATGCATTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHLTMLS*CYAFLE
Trigger: TTCCAAGAATGCATAACACAATGACAACATGGTGAG...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR CAA 90 bp AATAGCATTGTCCCACTGGATCTCTTACTTTATAAACCAGATGTGGCGCTACTGACTTTTCTCACCATGTaGTCATTGTGTTATGCATTC +
Preference number: 5 (lower is better)
Translates to: NSIVPLDLLLYKPDVALLTFLTM*SLCYAF
Trigger: GAATGCATAACACAATGACAACATGGTGAGAAAAGT...CAGTAGCGCCACATCTGGTTTATAAAGTAAGAGATCCAGTGGGACAATGCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR CAA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGTTTACACTAGCTACCTaGGAAGTAGTACTGCACTTT +
Preference number: 5 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMFTLAT*EVVLHF
Trigger: AAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAA...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR CAA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATCTTCAGAAATCCCTATaGTTTCACCAACCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDLQKSL*FHQPAF
Trigger: GAAGGCAGGTTGGTGAAACAATAGGGATTTCTGAAG...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339868.10
CDS GCA 90 bp GGAATAAAAAGTCTACTTTTAAGCCTTTACAAACAACATAGAAACTaGACGAATTCACTTGATCCTCGAGATTCCCTGAGTACCGGAGAT +
Preference number: 5 (lower is better)
Translates to: GIKSLLLSLYKQHRN*TNSLDPRDSLSTGD
Trigger: ATCTCCGGTACTCAGGGAATCTCGAGGATCAAGTGAATTCGTGCAGTTTCTATGTTGTTTGTAAAGGCTTAAAAGTAGACTTTTTATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS-3UTR CAA 90 bp AGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTGTGTTATGTGTAATTATTCTTGGTaGTTGTTGGGATCATCTTGG +
Preference number: 5 (lower is better)
Translates to: SYLGSSTALFSPCCHCVMCNYSW*LLGSSW
Trigger: CCAAGATGATCCCAACAACAACCAAGAATAATTACA...CATAACACAATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATTTACTATTTGTCTGCTaGAAGTTGAGGTGTAGTAAG +
Preference number: 5 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHLLFVC*KLRCSK
Trigger: CTTACTACACCTCAACTTCAAGCAGACAAATAGTAA...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTTTCCCTCACTTGAGTaGGGCTGTAGCTCTTCATTT +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFFPSLE*GCSSSF
Trigger: AAATGAAGAGCTACAGCCCAACTCAAGTGAGGGAAA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTACCTTCACCTTCTGGTaGAGTTTCACCTCCACTTTT +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFTFTFW*SFTSTF
Trigger: AAAAGTGGAGGTGAAACTCAACCAGAAGGTGAAGGT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp CTTTACACTAGCTACCTTGGAAGTAGTACTGCACTTTTCTCACCATGTTGTCATACTTTTCTCACCATGTaGTCATTGTGTTATGCATTC +
Preference number: 5 (lower is better)
Translates to: LYTSYLGSSTALFSPCCHTFLTM*SLCYAF
Trigger: GAATGCATAACACAATGACAACATGGTGAGAAAAGT...ATGACAACATGGTGAGAAAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTGTTGTTGGGATCATCTaGGCTGTTCTTTTAGGCATA +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFVVGII*AVLLGI
Trigger: TATGCCTAAAAGAACAGCCAAGATGATCCCAACAAC...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp AACCACAGAAGAAATCAGTCTTGCTTTATAATCCTATCTAGGTTGGCATACAAATATTCTTGGTTGTTGTaGGGATCATCTTGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: NHRRNQSCFIILSRLAYKYSWLL*GSSWLF
Trigger: GAACAGCCAAGATGATCCCAACAACAACCAAGAATA...TTTGTATGCCAACCTAGATAGGATTATAAAGCAAGACTGATTTCTTCTGTGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261892.11
ENST00000339868.10
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTATTCTTGGTTGTTGTaGGGATCATCTTGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFYSWLL*GSSWLF
Trigger: GAACAGCCAAGATGATCCCAACAACAACCAAGAATA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTTTGTCTGCTTGAAGTaGAGGTGTAGTAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFFVCLK*RCSKSV
Trigger: CACTGACTTACTACACCTCAACTTCAAGCAGACAAA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
38% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTCATGTGTCAGAAAAGTaGGGGTGCTATCAAACATTC +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFHVSEK*GCYQTF
Trigger: GAATGTTTGATAGCACCCCAACTTTTCTGACACATG...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp TGCTTTATAATCCTATCTAGGTTGGCATACAAAAATAGCATTGTCCCACTGGATTTTACACTAGCTACCTaGGAAGTAGTACTGCACTTT +
Preference number: 5 (lower is better)
Translates to: CFIILSRLAYKNSIVPLDFTLAT*EVVLHF
Trigger: AAAGTGCAGTACTACTTCCAAGGTAGCTAGTGTAAA...ATCCAGTGGGACAATGCTATTTTTGTATGCCAACCTAGATAGGATTATAAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000505666.2
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTAATTATTCTTGGTTGTaGTTGGGATCATCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFNYSWL*LGSSWL
Trigger: CAGCCAAGATGATCCCAACAACAACCAAGAATAATT...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTGTAATTATTCTTGGTaGTTGTTGGGATCATCTTGG +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFCNYSW*LLGSSW
Trigger: CCAAGATGATCCCAACAACAACCAAGAATAATTACA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS-3UTR CAA 90 bp CCTCTAAAAGTACAGCCAGATAGATTTTCATCCATATTGAGGAACTTAGCTTTTTTACTATTTGTCTGCTaGAAGTTGAGGTGTAGTAAG +
Preference number: 5 (lower is better)
Translates to: PLKVQPDRFSSILRNLAFLLFVC*KLRCSK
Trigger: CTTACTACACCTCAACTTCAAGCAGACAAATAGTAA...AAAAGCTAAGTTCCTCAATATGGATGAAAATCTATCTGGCTGTACTTTTAGAGG
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000537259.5
CDS TCA 72 bp CTTGGGGTGGAGGTCTGGCAAGCTGGGAGGCAGCACTaGGGGACTAGGACTGAGCTCCTCTGGGAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: LGVEVWQAGRQH*GTRTELLWEQG
Trigger: GCCCTGCTCCCAGAGGAGCTCAGTCCTAGTCCCTCAGTGCTGCCTCCCAGCTTGCCAGACCTCCACCCCAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CCA 72 bp CCAGCCCTGCCGCCGCTCCTCCACACTGAACAGATCTaGGGGGTACTCTCCCTTGGGGTGGAGGTCTGGCAA +
Preference number: 6 (lower is better)
Translates to: PALPPLLHTEQI*GVLSLGVEVWQ
Trigger: TTGCCAGACCTCCACCCCAAGGGAGAGTACCCCCCAGATCTGTTCAGTGTGGAGGAGCGGCGGCAGGGCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS GCA 72 bp TGCTGCGGATGGTGCTGTTGTGCAGAGAGGTCGAGCTaGTCCCTCGGGTCAGCAAGGACGGGAGCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: CCGWCCCAERSS*SLGSARTGASA
Trigger: AGCTGAAGCTCCCGTCCTTGCTGACCCGAGGGAGCAGCTCGACCTCTCTGCACAACAGCACCATCCGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
CDS GCA 72 bp CAGCAGTTTCGCCCTCTTCGCCTGGCATTTCACCTGTaGTCTCGGCCTCAGCCACATCTTCCTGACCGCCTG +
Preference number: 6 (lower is better)
Translates to: QQFRPLRLAFHL*SRPQPHLPDRL
Trigger: CAGGCGGTCAGGAAGATGTGGCTGAGGCCGAGAGCACAGGTGAAATGCCAGGCGAAGAGGGCGAAACTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000449142.2
ENST00000537259.5
ENST00000546330.1
CDS GCA 72 bp CAGCCAGGGGGTATCCACAACCCTGAGACAGGGGGATaGAGGTGGTGGCACTTCACACTGAGTGCAGCTCAG +
Preference number: 6 (lower is better)
Translates to: QPGGIHNPETGG*RWWHFTLSAAQ
Trigger: CTGAGCTGCACTCAGTGTGAAGTGCCACCACCTGCATCCCCCTGTCTCAGGGTTGTGGATACCCCCTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000434116.6
ENST00000535950.1
ENST00000537259.5
CDS CCA 72 bp CTCCTTCTGATCTCCCTTGATGTCTGGAACAGGGGCTaGTGTGACCGTGACCGCAGGGAGCTTGGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: LLLISLDVWNRG*CDRDRRELGWL
Trigger: GAGCCAGCCAAGCTCCCTGCGGTCACGGTCACACCAGCCCCTGTTCCAGACATCAAGGGAGATCAGAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000449142.2
ENST00000537259.5
ENST00000546330.1
CDS TCA 72 bp CTTCTAAGGAGCTCAGCCACACCCCCTCAGCCTGAGTaGGGAAGGGTGATAGGGGGACCGACAGCTGAGATG +
Preference number: 6 (lower is better)
Translates to: LLRSSATPPQPE*GRVIGGPTAEM
Trigger: CATCTCAGCTGTCGGTCCCCCTATCACCCTTCCTCACTCAGGCTGAGGGGGTGTGGCTGAGCTCCTTAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS CCA 72 bp CTCCTGCCTTCGGACGTCGGGGACTGTCAGCCACAGTaGGAACACGATGGGCAGAAGGAAGAGGTAAATGGC +
Preference number: 6 (lower is better)
Translates to: LLPSDVGDCQPQ*EHDGQKEEVNG
Trigger: GCCATTTACCTCTTCCTTCTGCCCATCGTGTTCCCACTGTGGCTGACAGTCCCCGACGTCCGAAGGCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261892.11
ENST00000434116.6
ENST00000449142.2
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CCA 72 bp GGGGGTATCCACAACCCTGAGACAGGGGGATGCAGGTaGTGGCACTTCACACTGAGTGCAGCTCAGAGACAG +
Preference number: 6 (lower is better)
Translates to: GGIHNPETGGCR*WHFTLSAAQRQ
Trigger: CTGTCTCTGAGCTGCACTCAGTGTGAAGTGCCACCACCTGCATCCCCCTGTCTCAGGGTTGTGGATACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000434116.6
ENST00000535950.1
ENST00000537259.5
CDS GCA 72 bp TATGCAACAGGACTGTTCCCTGGGGAGTCTTCGGGTTaGTCTTTCCCACTAACCCCCAGGGATGGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: YATGLFPGESSG*SFPLTPRDGLS
Trigger: GCTCAGCCCATCCCTGGGGGTTAGTGGGAAAGAGCAACCCGAAGACTCCCCAGGGAACAGTCCTGTTGCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS GCA 72 bp AGCCCATGTTGCCTTACAGGGAAATCTGAGCACGCATaGCTTGTCCAGGGTGAGAGGAACGAGGGCCCTCTG +
Preference number: 6 (lower is better)
Translates to: SPCCLTGKSEHA*LVQGERNEGPL
Trigger: CAGAGGGCCCTCGTTCCTCTCACCCTGGACAAGGCATGCGTGCTCAGATTTCCCTGTAAGGCAACATGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS CCA 72 bp AACCTGCCTTCGGACGTCGGGGACTGTCAGCCACAGTaGGAACACGATGGGCAGAAGGAAGAGGTAAATGGC +
Preference number: 6 (lower is better)
Translates to: NLPSDVGDCQPQ*EHDGQKEEVNG
Trigger: GCCATTTACCTCTTCCTTCTGCCCATCGTGTTCCCACTGTGGCTGACAGTCCCCGACGTCCGAAGGCAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339868.10
ENST00000399033.8
CDS CCA 72 bp GAGACAGGATTTCATCCTTACAGTCAAGTGCCCTTCTaGAGCGGCCAGAGGCCTGGAGCCCAATGCCTGCTC +
Preference number: 6 (lower is better)
Translates to: ETGFHPYSQVPF*SGQRPGAQCLL
Trigger: GAGCAGGCATTGGGCTCCAGGCCTCTGGCCGCTCCAGAAGGGCACTTGACTGTAAGGATGAAATCCTGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434116.6
ENST00000535950.1
ENST00000537259.5
CDS CAA 72 bp CCAGTAAGAAGAGGAGGCGACTCCAATGAAGCCGCTTaGTCCGGAGTAACCACCTCTCTTGCGGCCCCATCC +
Preference number: 6 (lower is better)
Translates to: PVRRGGDSNEAA*SGVTTSLAAPS
Trigger: GGATGGGGCCGCAAGAGAGGTGGTTACTCCGGACAAAGCGGCTTCATTGGAGTCGCCTCCTCTTCTTACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CAA 72 bp GTATGCAACAGGACTGTTCCCTGGGGAGTCTTCGGGTaGCTCTTTCCCACTAACCCCCAGGGATGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: VCNRTVPWGVFG*LFPTNPQGWAE
Trigger: CTCAGCCCATCCCTGGGGGTTAGTGGGAAAGAGCAACCCGAAGACTCCCCAGGGAACAGTCCTGTTGCATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CAA 90 bp GCAAGAGCCCATGTTGCCTTACAGGGAAATCTGAGCACGCATGCCTaGTCCAGGGTGAGAGGAACGAGGGCCCTCTGCTTCCCTCAAAGA +
Preference number: 6 (lower is better)
Translates to: ARAHVALQGNLSTHA*SRVRGTRALCFPQR
Trigger: TCTTTGAGGGAAGCAGAGGGCCCTCGTTCCTCTCACCCTGGACAAGGCATGCGTGCTCAGATTTCCCTGTAAGGCAACATGGGCTCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS TCA 72 bp CTGCATGGTCAGCTTTGCCCTGACCGTAGGGGTTGTTaGGGTGCTGGGTGCTGTGGAAGGTTTCTTTGCCAG +
Preference number: 6 (lower is better)
Translates to: LHGQLCPDRRGC*GAGCCGRFLCQ
Trigger: CTGGCAAAGAAACCTTCCACAGCACCCAGCACCTCAACAACCCCTACGGTCAGGGCAAAGCTGACCATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS GCA 72 bp CGCAAACAATGGCCAAGGCCACAAACACATACATCATaGCAAAAACGTGCAGGACCACCCAGCCCTGCCGCC +
Preference number: 6 (lower is better)
Translates to: RKQWPRPQTHTS*QKRAGPPSPAA
Trigger: GGCGGCAGGGCTGGGTGGTCCTGCACGTTTTTGGCATGATGTATGTGTTTGTGGCCTTGGCCATTGTTTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS GCA 72 bp GCAGCTCAGAGACAGGATTTCATCCTTACAGTCAAGTaGCCTTCTGGAGCGGCCAGAGGCCTGGAGCCCAAT +
Preference number: 6 (lower is better)
Translates to: AAQRQDFILTVK*PSGAARGLEPN
Trigger: ATTGGGCTCCAGGCCTCTGGCCGCTCCAGAAGGGCACTTGACTGTAAGGATGAAATCCTGTCTCTGAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434116.6
ENST00000535950.1
ENST00000537259.5
CDS GCA 72 bp GCAGCCAGAGGGCAGCTGCAGAGTGTGGGAAAAGGCTaGCATGGGGGTTGTGACATCTGGATTCTGATCCTA +
Preference number: 6 (lower is better)
Translates to: AARGQLQSVGKG*HGGCDIWILIL
Trigger: TAGGATCAGAATCCAGATGTCACAACCCCCATGGCAGCCTTTTCCCACACTCTGCAGCTGCCCTCTGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539516.1
CDS CCA 72 bp AGTTTCACCTTCACCAGCAGTTTCGCCCTCTTCGCCTaGCATTTCACCTGTGCTCTCGGCCTCAGCCACATC +
Preference number: 6 (lower is better)
Translates to: SFTFTSSFALFA*HFTCALGLSHI
Trigger: GATGTGGCTGAGGCCGAGAGCACAGGTGAAATGCCAGGCGAAGAGGGCGAAACTGCTGGTGAAGGTGAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000449142.2
ENST00000537259.5
ENST00000539516.1
ENST00000544319.6
ENST00000546330.1
CDS CAA 72 bp AATGTGGCGCCTGCCACATCCTCGGAGATCTGCAGCTaGTCTGTGATGACACCCAGGGCTGGAACGAAGTAC +
Preference number: 6 (lower is better)
Translates to: NVAPATSSEICS*SVMTPRAGTKY
Trigger: GTACTTCGTTCCAGCCCTGGGTGTCATCACAGACAAGCTGCAGATCTCCGAGGATGTGGCAGGCGCCACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CCA 72 bp GGAGATCTGCAGCTTGTCTGTGATGACACCCAGGGCTaGAACGAAGTACTCGTCGCAAACAATGGCCAAGGC +
Preference number: 6 (lower is better)
Translates to: GDLQLVCDDTQG*NEVLVANNGQG
Trigger: GCCTTGGCCATTGTTTGCGACGAGTACTTCGTTCCAGCCCTGGGTGTCATCACAGACAAGCTGCAGATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CCA 72 bp TGGGCAGAAGGAAGAGGTAAATGGCCTGCTTCTGCCTaGTTTCAGGCCAGTCCAGGGACAGAGGCTCTTCAT +
Preference number: 6 (lower is better)
Translates to: WAEGRGKWPASA*FQASPGTEALH
Trigger: ATGAAGAGCCTCTGTCCCTGGACTGGCCTGAAACCAGGCAGAAGCAGGCCATTTACCTCTTCCTTCTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000449142.2
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CCA 72 bp GGCACAGACTACAATGGAGACACCAGGTGGCCAGAGTaGCAGGCAAGAGCCCATGTTGCCTTACAGGGAAAT +
Preference number: 6 (lower is better)
Translates to: GTDYNGDTRWPE*QARAHVALQGN
Trigger: ATTTCCCTGTAAGGCAACATGGGCTCTTGCCTGCCACTCTGGCCACCTGGTGTCTCCATTGTAGTCTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS CCA 72 bp CTCAGCCACATCTTCCTTCTGGTTTGCTTTCTGCTTTaGCCTGGGGTTGGGCTCTGGCCCCTTGATTCAAGC +
Preference number: 6 (lower is better)
Translates to: LSHIFLLVCFLL*PGVGLWPLDSS
Trigger: GCTTGAATCAAGGGGCCAGAGCCCAACCCCAGGCCAAAGCAGAAAGCAAACCAGAAGGAAGATGTGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539516.1
CDS CAA 90 bp GTCCTGGGTGAAGGATTCCTAAGACTCCAGGCAGCAGTGAAGGCTTaGGTTTCTGCTGGGCTGCTGCCTGTCATGGTGCTTATTGTCACC +
Preference number: 6 (lower is better)
Translates to: VLGEGFLRLQAAVKA*VSAGLLPVMVLIVT
Trigger: GGTGACAATAAGCACCATGACAGGCAGCAGCCCAGCAGAAACCAAAGCCTTCACTGCTGCCTGGAGTCTTAGGAATCCTTCACCCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CAA 90 bp TCAGCCACATCTTCCTTCTGGTTTGCTTTCTGCTTTGGCCTGGGGTaGGGCTCTGGCCCCTTGATTCAAGCTCTCCTCCTCCTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: SATSSFWFAFCFGLG*GSGPLIQALLLLLL
Trigger: AAGGAGAAGGAGGAGGAGAGCTTGAATCAAGGGGCCAGAGCCCAACCCCAGGCCAAAGCAGAAAGCAAACCAGAAGGAAGATGTGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539516.1
CDS TCA 72 bp TCTTTGCCAGCCTCCAGACTATGGCTGGGGCTGTTTTaGTGGCTGATACACTGGTCCTGGGTGAAGGATTCC +
Preference number: 6 (lower is better)
Translates to: SLPASRLWLGLF*WLIHWSWVKDS
Trigger: GGAATCCTTCACCCAGGACCAGTGTATCAGCCATCAAAACAGCCCCAGCCATAGTCTGGAGGCTGGCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS TCA 72 bp CTGAGACAGGGGGATGCAGGTGGTGGCACTTCACACTaGGTGCAGCTCAGAGACAGGATTTCATCCTTACAG +
Preference number: 6 (lower is better)
Translates to: LRQGDAGGGTSH*VQLRDRISSLQ
Trigger: CTGTAAGGATGAAATCCTGTCTCTGAGCTGCACTCAGTGTGAAGTGCCACCACCTGCATCCCCCTGTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434116.6
ENST00000535950.1
ENST00000537259.5
CDS TCA 72 bp GCTGCAGAGTGTGGGAAAAGGCTGCCATGGGGGTTGTaGCATCTGGATTCTGATCCTACGAGGCCTAGTTGT +
Preference number: 6 (lower is better)
Translates to: AAECGKRLPWGL*HLDSDPTRPSC
Trigger: ACAACTAGGCCTCGTAGGATCAGAATCCAGATGTCACAACCCCCATGGCAGCCTTTTCCCACACTCTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539516.1
CDS GCA 72 bp GAGATGGCCACAGAGAGGAAGAGCAAGCAAGACTCCTaGTCCTGGCCACAGGGACCATGTTGCTCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: EMATERKSKQDS*SWPQGPCCSSF
Trigger: AAAAGAAGAGCAACATGGTCCCTGTGGCCAGGAGCAGGAGTCTTGCTTGCTCTTCCTCTCTGTGGCCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS CCA 72 bp AGTGTGGGAAAAGGCTGCCATGGGGGTTGTGACATCTaGATTCTGATCCTACGAGGCCTAGTTGTGGTGCCT +
Preference number: 6 (lower is better)
Translates to: SVGKGCHGGCDI*ILILRGLVVVP
Trigger: AGGCACCACAACTAGGCCTCGTAGGATCAGAATCCAGATGTCACAACCCCCATGGCAGCCTTTTCCCACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539516.1
CDS CAA 72 bp AAGGAGACATCACGGAATAAGGGCCACCAGGTGAGGTaGAGGATCTCTCGGGAGAAGAGGGAACAAGTGCCA +
Preference number: 6 (lower is better)
Translates to: KETSRNKGHQVR*RISREKREQVP
Trigger: TGGCACTTGTTCCCTCTTCTCCCGAGAGATCCTCAACCTCACCTGGTGGCCCTTATTCCGTGATGTCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS TCA 72 bp TTGTCCGGAGTAACCACCTCTCTTGCGGCCCCATCCTaGTCAATTTCCCCATGCTGGCCAGTTATATCTGGT +
Preference number: 6 (lower is better)
Translates to: LSGVTTSLAAPS*SISPCWPVISG
Trigger: ACCAGATATAACTGGCCAGCATGGGGAAATTGATCAGGATGGGGCCGCAAGAGAGGTGGTTACTCCGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
CDS TCA 72 bp GGTAGAGGATTTCGTTCCTGCTGTTCACTCACCTGGTaGGCCCACCACACCATGAGGTATGAGAACATGGCT +
Preference number: 6 (lower is better)
Translates to: GRGFRSCCSLTW*AHHTMRYENMA
Trigger: AGCCATGTTCTCATACCTCATGGTGTGGTGGGCTCACCAGGTGAGTGAACAGCAGGAACGAAATCCTCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS GCA 72 bp TATTCTCCACTGTCATGCTCAGTGTTGCTTCATCACTaGCCACTGAGGCTTGGGGTACCAGCATCTTACCCC +
Preference number: 6 (lower is better)
Translates to: YSPLSCSVLLHH*PLRLGVPASYP
Trigger: GGGGTAAGATGCTGGTACCCCAAGCCTCAGTGGGCAGTGATGAAGCAACACTGAGCATGACAGTGGAGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS GCA 72 bp GACAGGGGGATGCAGGTGGTGGCACTTCACACTGAGTaGAGCTCAGAGACAGGATTTCATCCTTACAGTCAA +
Preference number: 6 (lower is better)
Translates to: DRGMQVVALHTE*SSETGFHPYSQ
Trigger: TTGACTGTAAGGATGAAATCCTGTCTCTGAGCTGCACTCAGTGTGAAGTGCCACCACCTGCATCCCCCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434116.6
ENST00000535950.1
ENST00000537259.5
CDS GCA 72 bp CAAGCACTATCCACATCCTACTTTGTGCAAACAGACTaGCTTCTAAGGAGCTCAGCCACACCCCCTCAGCCT +
Preference number: 6 (lower is better)
Translates to: QALSTSYFVQTD*LLRSSATPPQP
Trigger: AGGCTGAGGGGGTGTGGCTGAGCTCCTTAGAAGGCAGTCTGTTTGCACAAAGTAGGATGTGGATAGTGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS CAA 72 bp TTCTTTGCCAGCCTCCAGACTATGGCTGGGGCTGTTTaGATGGCTGATACACTGGTCCTGGGTGAAGGATTC +
Preference number: 6 (lower is better)
Translates to: FFASLQTMAGAV*MADTLVLGEGF
Trigger: GAATCCTTCACCCAGGACCAGTGTATCAGCCATCAAAACAGCCCCAGCCATAGTCTGGAGGCTGGCAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CAA 90 bp GTGGAAGGTTTCTTTGCCAGCCTCCAGACTATGGCTGGGGCTGTTTaGATGGCTGATACACTGGTCCTGGGTGAAGGATTCCTAAGACTC +
Preference number: 6 (lower is better)
Translates to: VEGFFASLQTMAGAV*MADTLVLGEGFLRL
Trigger: GAGTCTTAGGAATCCTTCACCCAGGACCAGTGTATCAGCCATCAAAACAGCCCCAGCCATAGTCTGGAGGCTGGCAAAGAAACCTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS TCA 72 bp ATCAACATTCCCAGTAAGAAGAGGAGGCGACTCCAATaGAGCCGCTTTGTCCGGAGTAACCACCTCTCTTGC +
Preference number: 6 (lower is better)
Translates to: INIPSKKRRRLQ*SRFVRSNHLSC
Trigger: GCAAGAGAGGTGGTTACTCCGGACAAAGCGGCTTCATTGGAGTCGCCTCCTCTTCTTACTGGGAATGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS GCA 72 bp CCACATTGTTCTTTGAACCGTAACTACCCAGGGGCCTaGTGGCATCCATCTAAGCCTATCTCTAGCTGGGAT +
Preference number: 6 (lower is better)
Translates to: PHCSLNRNYPGA*WHPSKPISSWD
Trigger: ATCCCAGCTAGAGATAGGCTTAGATGGATGCCAGCAGGCCCCTGGGTAGTTACGGTTCAAAGAACAATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS CCA 72 bp CCAGGGGGTATCCACAACCCTTCAGACCTTGACATCTaGCTGTCTTCTCAGCTCTGGAAACTTGTCAGAATC +
Preference number: 6 (lower is better)
Translates to: PGGIHNPSDLDI*LSSQLWKLVRI
Trigger: GATTCTGACAAGTTTCCAGAGCTGAGAAGACAGCCAGATGTCAAGGTCTGAAGGGTTGTGGATACCCCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000544319.6
CDS CCA 72 bp TGTGGACGGCACGTAAGTGCCTACTCTTCTACCACGTaGGGAAGGAGTATACTTCACCTTTTCCCTCACTTG +
Preference number: 6 (lower is better)
Translates to: CGRHVSAYSSTT*GRSILHLFPHL
Trigger: CAAGTGAGGGAAAAGGTGAAGTATACTCCTTCCCCACGTGGTAGAAGAGTAGGCACTTACGTGCCGTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CCA 72 bp TCACTGTCTTTCACTGTTGTCCTGGGGGTGATCGCATaGCTTGTTTCCATTGTCATGAATGTGGACGGCACG +
Preference number: 6 (lower is better)
Translates to: SLSFTVVLGVIA*LVSIVMNVDGT
Trigger: CGTGCCGTCCACATTCATGACAATGGAAACAAGCCATGCGATCACCCCCAGGACAACAGTGAAAGACAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CCA 72 bp CATTGTTCTTTGAACCGTAACTACCCAGGGGCCTGCTaGCATCCATCTAAGCCTATCTCTAGCTGGGATTCC +
Preference number: 6 (lower is better)
Translates to: HCSLNRNYPGAC*HPSKPISSWDS
Trigger: GGAATCCCAGCTAGAGATAGGCTTAGATGGATGCCAGCAGGCCCCTGGGTAGTTACGGTTCAAAGAACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS TCA 72 bp TTCACCAACCTGGTGAGCCCACCACACCATGAGGTATaGGAACATGGCTATCCACATGATAGATCCCAGGAA +
Preference number: 6 (lower is better)
Translates to: FTNLVSPPHHEV*EHGYPHDRSQE
Trigger: TTCCTGGGATCTATCATGTGGATAGCCATGTTCTCATACCTCATGGTGTGGTGGGCTCACCAGGTTGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261892.11
ENST00000449142.2
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS TCA 72 bp TTCACTCACCTGGTGAGCCCACCACACCATGAGGTATaGGAACATGGCTATCCACATGATAGATCCCAGGAA +
Preference number: 6 (lower is better)
Translates to: FTHLVSPPHHEV*EHGYPHDRSQE
Trigger: TTCCTGGGATCTATCATGTGGATAGCCATGTTCTCATACCTCATGGTGTGGTGGGCTCACCAGGTGAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS GCA 72 bp CTGGCTCCCTACATGGTTAGAAAGAAAGTCACCTCTTaGCCTCTTAAGGACCTCACTGAGGCACAGACTACA +
Preference number: 6 (lower is better)
Translates to: LAPYMVRKKVTS*PLKDLTEAQTT
Trigger: TGTAGTCTGTGCCTCAGTGAGGTCCTTAAGAGGGCAAGAGGTGACTTTCTTTCTAACCATGTAGGGAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS CCA 72 bp CACCCAGGGCTGGAACGAAGTACTCGTCGCAAACAATaGCCAAGGCCACAAACACATACATCATGCCAAAAA +
Preference number: 6 (lower is better)
Translates to: HPGLERSTRRKQ*PRPQTHTSCQK
Trigger: TTTTTGGCATGATGTATGTGTTTGTGGCCTTGGCCATTGTTTGCGACGAGTACTTCGTTCCAGCCCTGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CCA 72 bp GGCGAACTGCAAATGAGACAGGACATACATCTTACCTaGAATTGTAGGATCATCCCTGCCACGCCCTTTCAG +
Preference number: 6 (lower is better)
Translates to: GELQMRQDIHLT*NCRIIPATPFQ
Trigger: CTGAAAGGGCGTGGCAGGGATGATCCTACAATTCCAGGTAAGATGTATGTCCTGTCTCATTTGCAGTTCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539516.1
CDS CAA 72 bp GGGAAGGAGTATACTTCACCTTTTCCCTCACTTGAGTaGGGCTGTAGCTCTTCATTTCTCCCCTGGGTGTTG +
Preference number: 6 (lower is better)
Translates to: GKEYTSPFPSLE*GCSSSFLPWVL
Trigger: CAACACCCAGGGGAGAAATGAAGAGCTACAGCCCAACTCAAGTGAGGGAAAAGGTGAAGTATACTCCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CAA 90 bp GTCTGCTTGAAGTTGAGGTGTAGTAAGTCAGTGTTCTACTGGATGTaGGGGTGTCTTCCTTCCTTCTTTCTGTACCTGCTGCTGTTGGGC +
Preference number: 6 (lower is better)
Translates to: VCLKLRCSKSVFYWM*GCLPSFFLYLLLLG
Trigger: GCCCAACAGCAGCAGGTACAGAAAGAAGGAAGGAAGACACCCCAACATCCAGTAGAACACTGACTTACTACACCTCAACTTCAAGCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CAA 90 bp CCTTTCTGTACTCACTTTGTAACCTATGTGGTTCCACATTGTTCTTaGAACCGTAACTACCCAGGGGCCTGCTGGCATCCATCTAAGCCT +
Preference number: 6 (lower is better)
Translates to: PFCTHFVTYVVPHCS*NRNYPGACWHPSKP
Trigger: AGGCTTAGATGGATGCCAGCAGGCCCCTGGGTAGTTACGGTTCAAAGAACAATGTGGAACCACATAGGTTACAAAGTGAGTACAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS TCA 72 bp GAAACTGCACGAATTCACTTGATCCTCGAGATTCCCTaGGTACCGGAGATTGATCCTGAAGGAAAGTGTCGT +
Preference number: 6 (lower is better)
Translates to: ETARIHLILEIP*VPEIDPEGKCR
Trigger: ACGACACTTTCCTTCAGGATCAATCTCCGGTACTCAGGGAATCTCGAGGATCAAGTGAATTCGTGCAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS GCA 72 bp TTCAGCTGGAATCAGGCAGGATTCCAAGGCCTTCTATaGCATGCTACAGGATATGACAGAAAAGCCACACTT +
Preference number: 6 (lower is better)
Translates to: FSWNQAGFQGLL*HATGYDRKATL
Trigger: AAGTGTGGCTTTTCTGTCATATCCTGTAGCATGGCATAGAAGGCCTTGGAATCCTGCCTGATTCCAGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS TCA 72 bp GTAACTTCTGCATGGTCTTCTGATCCATGCCCATTGTaGGCAAGAGTGACTGATTCAGACAGATACAGGACA +
Preference number: 6 (lower is better)
Translates to: VTSAWSSDPCPL*ARVTDSDRYRT
Trigger: TGTCCTGTATCTGTCTGAATCAGTCACTCTTGCTCACAATGGGCATGGATCAGAAGACCATGCAGAAGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000449142.2
CDS TCA 72 bp AGCAACTGGCCCCACAATCTCCCACATAACAAGCTGTaGGAAGTCAGACAGATTTGTCTGTTCAGTTCAAAG +
Preference number: 6 (lower is better)
Translates to: SNWPHNLPHNKL*EVRQICLFSSK
Trigger: CTTTGAACTGAACAGACAAATCTGTCTGACTTCTCACAGCTTGTTATGTGGGAGATTGTGGGGCCAGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS CCA 72 bp CCTTCAGACCTTGACATCTGGCTGTCTTCTCAGCTCTaGAAACTTGTCAGAATCCAATATCTCAAAGAGTGG +
Preference number: 6 (lower is better)
Translates to: PSDLDIWLSSQL*KLVRIQYLKEW
Trigger: CCACTCTTTGAGATATTGGATTCTGACAAGTTTCCAGAGCTGAGAAGACAGCCAGATGTCAAGGTCTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000544319.6
CDS CCA 72 bp ATCCTGATCAATTTCCCCATGCTGGCCAGTTATATCTaGTTACAGAAGGCCTCTCATTCTGTCCTAAGATGG +
Preference number: 6 (lower is better)
Translates to: ILINFPMLASYI*LQKASHSVLRW
Trigger: CCATCTTAGGACAGAATGAGAGGCCTTCTGTAACCAGATATAACTGGCCAGCATGGGGAAATTGATCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
CDS CCA 72 bp TGCTGCTGTTGGGCTGTAATTATTCTTGGTTGTTGTTaGGATCATCTTGGCTGTTCTTTTAGGCATACTGGG +
Preference number: 6 (lower is better)
Translates to: CCCWAVIILGCC*DHLGCSFRHTG
Trigger: CCCAGTATGCCTAAAAGAACAGCCAAGATGATCCCAACAACAACCAAGAATAATTACAGCCCAACAGCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CCA 72 bp TGCTTGAAGTTGAGGTGTAGTAAGTCAGTGTTCTACTaGATGTTGGGGTGTCTTCCTTCCTTCTTTCTGTAC +
Preference number: 6 (lower is better)
Translates to: CLKLRCSKSVFY*MLGCLPSFFLY
Trigger: GTACAGAAAGAAGGAAGGAAGACACCCCAACATCCAGTAGAACACTGACTTACTACACCTCAACTTCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CAA 72 bp GATTTATTTCCTTTACAAGCTCAAGTGATGGCCTGCTaGGGTACTGAATTGAGAAGGACTCTGACCCAAACT +
Preference number: 6 (lower is better)
Translates to: DLFPLQAQVMAC*GTELRRTLTQT
Trigger: AGTTTGGGTCAGAGTCCTTCTCAATTCAGTACCCAAGCAGGCCATCACTTGAGCTTGTAAAGGAAATAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539516.1
CDS TCA 72 bp TTTCCCTTCTCAAGGCCTATTTCCTCTCTGGTAAAATaGCATGGTTGGACTCAGGACCAAGAAATAGGATTT +
Preference number: 6 (lower is better)
Translates to: FPFSRPISSLVK*HGWTQDQEIGF
Trigger: AAATCCTATTTCTTGGTCCTGAGTCCAACCATGTCATTTTACCAGAGAGGAAATAGGCCTTGAGAAGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539516.1
CDS GCA 72 bp AGTTTCACCTTCATTACCTTTCATTTCACCATCTTCTaGGTGGATTTCACCCTCATCTTCACCTTCATTGTC +
Preference number: 6 (lower is better)
Translates to: SFTFITFHFTIF*VDFTLIFTFIV
Trigger: GACAATGAAGGTGAAGATGAGGGTGAAATCCACGCAGAAGATGGTGAAATGAAAGGTAATGAAGGTGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000449142.2
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS GCA 72 bp TTTCACAATTGGACTAAAAGTTACCTACACCAGATCTaGTGCTCACTGTCATTCCAACTCTTAACACCCCTA +
Preference number: 6 (lower is better)
Translates to: FHNWTKSYLHQI*CSLSFQLLTPL
Trigger: TAGGGGTGTTAAGAGTTGGAATGACAGTGAGCAGCAGATCTGGTGTAGGTAACTTTTAGTCCAATTGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434116.6
CDS CAA 90 bp ATTTCCCTTCTCAAGGCCTATTTCCTCTCTGGTAAAATGACATGGTaGGACTCAGGACCAAGAAATAGGATTTATTTCCTTTACAAGCTC +
Preference number: 6 (lower is better)
Translates to: ISLLKAYFLSGKMTW*DSGPRNRIYFLYKL
Trigger: GAGCTTGTAAAGGAAATAAATCCTATTTCTTGGTCCTGAGTCCAACCATGTCATTTTACCAGAGAGGAAATAGGCCTTGAGAAGGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539516.1
CDS GCA 72 bp TCTCTTAAGAGAGTTGGTTTCGAGTATTTTATAGGTTaGTGTAATGTCACTGTCTTTCACTGTTGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: SLKRVGFEYFIG*CNVTVFHCCPG
Trigger: CCCAGGACAACAGTGAAAGACAGTGACATTACAGCAACCTATAAAATACTCGAAACCAACTCTCTTAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261892.11
ENST00000339868.10
ENST00000399033.8
ENST00000434116.6
ENST00000537259.5
ENST00000544319.6
ENST00000546330.1
CDS CAA 72 bp CTCAAGGCCTATTTCCTCTCTGGTAAAATGACATGGTaGGACTCAGGACCAAGAAATAGGATTTATTTCCTT +
Preference number: 6 (lower is better)
Translates to: LKAYFLSGKMTW*DSGPRNRIYFL
Trigger: AAGGAAATAAATCCTATTTCTTGGTCCTGAGTCCAACCATGTCATTTTACCAGAGAGGAAATAGGCCTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539516.1
CDS GCA 72 bp TTCCAGTCATACTTAACACCCCTTAGAAAGTTACATTaGCACTCACCCCACAGTGATATCAAATATGTTACT +
Preference number: 6 (lower is better)
Translates to: FQSYLTPLRKLH*HSPHSDIKYVT
Trigger: AGTAACATATTTGATATCACTGTGGGGTGAGTGGCAATGTAACTTTCTAAGGGGTGTTAAGTATGACTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434116.6