RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC23A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000213901

Ensembl transcript IDs: ENST00000295738.11, ENST00000409370.6, ENST00000409878.8, ENST00000414999.5, ENST00000421779.2, ENST00000430764.2, ENST00000455516.6, ENST00000461812.1, ENST00000465580.3, ENST00000497918.5

Found 361 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTGGGCTACCTCCCTGTGGGCAGAGAGCCCTGCCACAACCAGGCTaGGAGCCAGCACCAGGGGCCCACAGTGGGGGAACACGTGGCCGG +
Preference number: 1 (lower is better)
Translates to: TGLPPCGQRALPQPG*EPAPGAHSGGTRGR
Trigger: CCGGCCACGTGTTCCCCCACTGTGGGCCCCTGGTGCTGGCTCCCAGCCTGGTTGTGGCAGGGCTCTCTGCCCACAGGGAGGTAGCCCAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR CCA 90 bp AAGGCCAACCCCCAGTGTGTGAAGCAGAACTGGGCTACCTCCCTGTaGGCAGAGAGCCCTGCCACAACCAGGCTGGGAGCCAGCACCAGG +
Preference number: 1 (lower is better)
Translates to: KANPQCVKQNWATSL*AESPATTRLGASTR
Trigger: CCTGGTGCTGGCTCCCAGCCTGGTTGTGGCAGGGCTCTCTGCCCACAGGGAGGTAGCCCAGTTCTGCTTCACACACTGGGGGTTGGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR TCA 90 bp CACCATGAGCAGGATAACCGTACAGCAAGGCCAACCCCCAGTGTGTaGAGCAGAACTGGGCTACCTCCCTGTGGGCAGAGAGCCCTGCCA +
Preference number: 1 (lower is better)
Translates to: HHEQDNRTARPTPSV*SRTGLPPCGQRALP
Trigger: TGGCAGGGCTCTCTGCCCACAGGGAGGTAGCCCAGTTCTGCTTCACACACTGGGGGTTGGCCTTGCTGTACGGTTATCCTGCTCATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR CCA 90 bp TGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTaGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACC +
Preference number: 1 (lower is better)
Translates to: CNTHTHILCLQERTV*ELTLQQMRVRAKLT
Trigger: GGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
3UTR-3UTR CCA 90 bp GCCCAGGTGCTGAGAACAGACCACCATGAGCAGGATAACCGTACAGCAAGGCCACAGTGGGGGAACACGTaGCCGGGACTCCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: AQVLRTDHHEQDNRTARPQWGNT*PGLPSS
Trigger: GCTGCTGGGGAGTCCCGGCCACGTGTTCCCCCACTG...TGGCCTTGCTGTACGGTTATCCTGCTCATGGTGGTCTGTTCTCAGCACCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR-3UTR CCA 90 bp TGCCTTGGTGGGGGCAGACAGTTCCTGGGGGATAACACTGAATCCCACAAAGGCACCAGGGGCCCACAGTaGGGGAACACGTGGCCGGGA +
Preference number: 2 (lower is better)
Translates to: CLGGGRQFLGDNTESHKGTRGPQ*GNTWPG
Trigger: TCCCGGCCACGTGTTCCCCCACTGTGGGCCCCTGGT...GCCTTTGTGGGATTCAGTGTTATCCCCCAGGAACTGTCTGCCCCCACCAAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR-3UTR GCA 90 bp CAAGGCCAACCCCCAGTGTGTGAAGCAGAACTGGGCTACCTCCCTGTGGGCAGACCCAGATACTACCACTaGCCCGGACACCTCCTGGAG +
Preference number: 2 (lower is better)
Translates to: QGQPPVCEAELGYLPVGRPRYYH*PGHLLE
Trigger: CTCCAGGAGGTGTCCGGGGCAGTGGTAGTATCTGGG...TCTGCCCACAGGGAGGTAGCCCAGTTCTGCTTCACACACTGGGGGTTGGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR-3UTR CCA 90 bp CAGGCCATGGCAGCTAGGTCCCCTACAAAGGTGCAGCATGAGGGAGGAGTTTCCGCCCGGGGTAGCTTCTaGCTGGTCAGCACCAGAGCA +
Preference number: 2 (lower is better)
Translates to: QAMAARSPTKVQHEGGVSARGSF*LVSTRA
Trigger: TGCTCTGGTGCTGACCAGCCAGAAGCTACCCCGGGC...GGAAACTCCTCCCTCATGCTGCACCTTTGTAGGGGACCTAGCTGCCATGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR-3UTR GCA 90 bp AATCCATGGTGCCTTGGTGGGGGCAGACAGTTCCTGGGGGATAACACTGAATCCGTGGGCAGAGAGCCCTaGCACAACCAGGCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: NPWCLGGGRQFLGDNTESVGREP*HNQAGS
Trigger: GCTCCCAGCCTGGTTGTGGCAGGGCTCTCTGCCCAC...GGATTCAGTGTTATCCCCCAGGAACTGTCTGCCCCCACCAAGGCACCATGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR-3UTR CCA 90 bp GCCGGAAGACAGGGAGAGGAGTGTGAGTTGATGACGTTGAAGCTCGCCTCCAGGTTCCAGGTGTCTGGATaGCCCGGGGTAGCTTCTGGC +
Preference number: 2 (lower is better)
Translates to: AGRQGEECELMTLKLASRFQVSG*PGVASG
Trigger: GCCAGAAGCTACCCCGGGCCATCCAGACACCTGGAA...CCTGGAGGCGAGCTTCAACGTCATCAACTCACACTCCTCTCCCTGTCTTCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR-3UTR CCA 90 bp ATGAAACTGGCAGGAGCCCAGGTGCTGAGAACAGACCACCATGAGCAGGATAACCTGCCACAACCAGGCTaGGAGCCAGCACCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: MKLAGAQVLRTDHHEQDNLPQPG*EPAPGA
Trigger: GGCCCCTGGTGCTGGCTCCCAGCCTGGTTGTGGCAG...GTTATCCTGCTCATGGTGGTCTGTTCTCAGCACCTGGGCTCCTGCCAGTTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR CAA 90 bp CCGAAAGGAGCCGGAAGACAGGGAGAGGAGTGTGAGTTGATGACGTaGAAGCTCGCCTCCAGGGGCACACATGAAACTGGCAGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: PKGAGRQGEECELMT*KLASRGTHETGRSP
Trigger: TGGGCTCCTGCCAGTTTCATGTGTGCCCCTGGAGGCGAGCTTCAACGTCATCAACTCACACTCCTCTCCCTGTCTTCCGGCTCCTTTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR-3UTR CCA 90 bp AGACAGGGAGAGGAGTGTGAGTTGATGACGTTGAAGCTCGCCTCCAGGGGCACACAGTGCCCCAGGCCATaGCAGCTAGGTCCCCTACAA +
Preference number: 2 (lower is better)
Translates to: RQGEECELMTLKLASRGTQCPRP*QLGPLQ
Trigger: TTGTAGGGGACCTAGCTGCCATGGCCTGGGGCACTG...TGTGCCCCTGGAGGCGAGCTTCAACGTCATCAACTCACACTCCTCTCCCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR-3UTR GCA 90 bp CAGCCAAATCCATGGTGCCTTGGTGGGGGCAGACAGTTCCTGGGGGATAACACTAGCCCCATCATGCCCTaGAGCAGCCCAGATACTACC +
Preference number: 2 (lower is better)
Translates to: QPNPWCLGGGRQFLGDNTSPIMP*SSPDTT
Trigger: GGTAGTATCTGGGCTGCTGCAGGGCATGATGGGGCT...AGTGTTATCCCCCAGGAACTGTCTGCCCCCACCAAGGCACCATGGATTTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR-3UTR CCA 90 bp AGACAGGGAGAGGAGTGTGAGTTGATGACGTTGAAGCTCGCCTCCAGGGGCACAGAGTTTCCAGGTGTCTaGATGGCCCGGGGTAGCTTC +
Preference number: 2 (lower is better)
Translates to: RQGEECELMTLKLASRGTEFPGV*MARGSF
Trigger: GAAGCTACCCCGGGCCATCCAGACACCTGGAAACTC...TGTGCCCCTGGAGGCGAGCTTCAACGTCATCAACTCACACTCCTCTCCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR-3UTR CCA 90 bp TGGTGCCTTGGTGGGGGCAGACAGTTCCTGGGGGATAACACTGAATCCCACAAAGCCCCGGACACCTCCTaGAGAGAAGTGTTCCAGTGC +
Preference number: 2 (lower is better)
Translates to: WCLGGGRQFLGDNTESHKAPDTS*REVFQC
Trigger: GCACTGGAACACTTCTCTCCAGGAGGTGTCCGGGGC...TTTGTGGGATTCAGTGTTATCCCCCAGGAACTGTCTGCCCCCACCAAGGCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR-3UTR GCA 90 bp TGCCTTGGTGGGGGCAGACAGTTCCTGGGGGATAACACTGAATCCCACAAAGGCAGAGAAGTGTTCCAGTaGCCCAGGCCATGGCAGCTA +
Preference number: 2 (lower is better)
Translates to: CLGGGRQFLGDNTESHKGREVFQ*PRPWQL
Trigger: TAGCTGCCATGGCCTGGGGCACTGGAACACTTCTCT...GCCTTTGTGGGATTCAGTGTTATCCCCCAGGAACTGTCTGCCCCCACCAAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR-3UTR GCA 90 bp GCCCAGGTGCTGAGAACAGACCACCATGAGCAGGATAACCGTACAGCAAGGCCAGGTCCCCTACAAAGGTaGAGCATGAGGGAGGAGTTT +
Preference number: 2 (lower is better)
Translates to: AQVLRTDHHEQDNRTARPGPLQR*SMREEF
Trigger: AAACTCCTCCCTCATGCTGCACCTTTGTAGGGGACC...TGGCCTTGCTGTACGGTTATCCTGCTCATGGTGGTCTGTTCTCAGCACCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR-3UTR TCA 90 bp AGAAACAATCCACACACAGGCCACTGGGATCAGCACCGAAAGGAGCCGGAAGACTACAAAGGTGCAGCATaGGGGAGGAGTTTCCAGGTG +
Preference number: 2 (lower is better)
Translates to: RNNPHTGHWDQHRKEPEDYKGAA*GRSFQV
Trigger: CACCTGGAAACTCCTCCCTCATGCTGCACCTTTGTA...GTCTTCCGGCTCCTTTCGGTGCTGATCCCAGTGGCCTGTGTGTGGATTGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR-3UTR TCA 90 bp AATCCATGGTGCCTTGGTGGGGGCAGACAGTTCCTGGGGGATAACACTGAATCCACAGGGAGAGGAGTGTaGGTTGATGACGTTGAAGCT +
Preference number: 2 (lower is better)
Translates to: NPWCLGGGRQFLGDNTESTGRGV*VDDVEA
Trigger: AGCTTCAACGTCATCAACTCACACTCCTCTCCCTGT...GGATTCAGTGTTATCCCCCAGGAACTGTCTGCCCCCACCAAGGCACCATGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR-3UTR CCA 90 bp TTAGTAATTACAAAGGTCTTTTTAAACCGTAAATGCCTTGAGACGGCATGGACCCAAGAAAGAACAGTTTaGGAGCTGACTCTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: LVITKVFLNRKCLETAWTQERTV*ELTLQQ
Trigger: CTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTG...GGTCCATGCCGTCTCAAGGCATTTACGGTTTAAAAAGACCTTTGTAATTACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
3UTR CAA 90 bp AGATGCTCAGTAAGTATTAAAGTGAATGCTGGGGTTCAAGTGGCATaGATAGTACACAGGCAAAATCTCAATCATTCATGGTCCACTAAA +
Preference number: 2 (lower is better)
Translates to: RCSVSIKVNAGVQVA*IVHRQNLNHSWSTK
Trigger: TTTAGTGGACCATGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCATTCACTTTAATACTTACTGAGCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
3UTR GCA 72 bp GCAGAACTGGGCTACCTCCCTGTGGGCAGAGAGCCCTaGCACAACCAGGCTGGGAGCCAGCACCAGGGGCCC +
Preference number: 3 (lower is better)
Translates to: AELGYLPVGREP*HNQAGSQHQGP
Trigger: GGGCCCCTGGTGCTGGCTCCCAGCCTGGTTGTGGCAGGGCTCTCTGCCCACAGGGAGGTAGCCCAGTTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR TCA 72 bp AGCACCGAAAGGAGCCGGAAGACAGGGAGAGGAGTGTaGGTTGATGACGTTGAAGCTCGCCTCCAGGGGCAC +
Preference number: 3 (lower is better)
Translates to: STERSRKTGRGV*VDDVEARLQGH
Trigger: GTGCCCCTGGAGGCGAGCTTCAACGTCATCAACTCACACTCCTCTCCCTGTCTTCCGGCTCCTTTCGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR CCA 72 bp ACCTCCTGGAGAGAAGTGTTCCAGTGCCCCAGGCCATaGCAGCTAGGTCCCCTACAAAGGTGCAGCATGAGG +
Preference number: 3 (lower is better)
Translates to: TSWREVFQCPRP*QLGPLQRCSMR
Trigger: CCTCATGCTGCACCTTTGTAGGGGACCTAGCTGCCATGGCCTGGGGCACTGGAACACTTCTCTCCAGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR CCA 72 bp CACACACATATCCTCTGCCTACAAGAAAGAACAGTTTaGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGCT +
Preference number: 3 (lower is better)
Translates to: HTHILCLQERTV*ELTLQQMRVRA
Trigger: AGCCCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
3UTR CCA 72 bp AAGGTCTTTTTAAACCGTAAATGCCTTGAGACGGCATaGACCCTGTCTTATCCCTGTAGTTCCAGGACCTTG +
Preference number: 3 (lower is better)
Translates to: KVFLNRKCLETA*TLSYPCSSRTL
Trigger: CAAGGTCCTGGAACTACAGGGATAAGACAGGGTCCATGCCGTCTCAAGGCATTTACGGTTTAAAAAGACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
3UTR-3UTR CAA 90 bp GCATTTTCGTTAGTAATTACAAAGGTCTTTTTAAACCGTAAATGCCTTGAGACGAGGCAACCCACCCTATaGGGAAATGGAACCTCTAGA +
Preference number: 3 (lower is better)
Translates to: AFSLVITKVFLNRKCLETRQPTL*GNGTSR
Trigger: TCTAGAGGTTCCATTTCCCAATAGGGTGGGTTGCCT...CGTCTCAAGGCATTTACGGTTTAAAAAGACCTTTGTAATTACTAACGAAAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
3UTR-3UTR CAA 90 bp TTAGTAATTACAAAGGTCTTTTTAAACCGTAAATGCCTTGAGACGGCATGGACCGGGGTTCAAGTGGCATaGATAGTACACAGGCAAAAT +
Preference number: 3 (lower is better)
Translates to: LVITKVFLNRKCLETAWTGVQVA*IVHRQN
Trigger: ATTTTGCCTGTGTACTATCAATGCCACTTGAACCCC...GGTCCATGCCGTCTCAAGGCATTTACGGTTTAAAAAGACCTTTGTAATTACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp CAGGCCATGGCAGCTAGGTCCCCTACAAAGGTGCAGCATGAGGGAGGAGTTTCCCTGCCACAACCAGGCTaGGAGCCAGCACCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: QAMAARSPTKVQHEGGVSLPQPG*EPAPGA
Trigger: GGCCCCTGGTGCTGGCTCCCAGCCTGGTTGTGGCAG...GGAAACTCCTCCCTCATGCTGCACCTTTGTAGGGGACCTAGCTGCCATGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR GCA 90 bp CAGGCCATGGCAGCTAGGTCCCCTACAAAGGTGCAGCATGAGGGAGGAGTTTCCGTGGGCAGAGAGCCCTaGCACAACCAGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: QAMAARSPTKVQHEGGVSVGREP*HNQAGS
Trigger: GCTCCCAGCCTGGTTGTGGCAGGGCTCTCTGCCCAC...GGAAACTCCTCCCTCATGCTGCACCTTTGTAGGGGACCTAGCTGCCATGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR CCA 90 bp TGTGAAGCAGAACTGGGCTACCTCCCTGTGGGCAGAGAGCCCTGCCACAACCAGGCCCGGGGTAGCTTCTaGCTGGTCAGCACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CEAELGYLPVGREPCHNQARGSF*LVSTRA
Trigger: TGCTCTGGTGCTGACCAGCCAGAAGCTACCCCGGGC...CTGGTTGTGGCAGGGCTCTCTGCCCACAGGGAGGTAGCCCAGTTCTGCTTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR CCA 90 bp TGCCTTGGTGGGGGCAGACAGTTCCTGGGGGATAACACTGAATCCCACAAAGGCCAGTGGGGGAACACGTaGCCGGGACTCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CLGGGRQFLGDNTESHKGQWGNT*PGLPSS
Trigger: GCTGCTGGGGAGTCCCGGCCACGTGTTCCCCCACTG...GCCTTTGTGGGATTCAGTGTTATCCCCCAGGAACTGTCTGCCCCCACCAAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR CCA 90 bp GGTGCCTTGGTGGGGGCAGACAGTTCCTGGGGGATAACACTGAATCCCACAAAGACCAGGGGCCCACAGTaGGGGAACACGTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: GALVGADSSWGITLNPTKTRGPQ*GNTWPG
Trigger: TCCCGGCCACGTGTTCCCCCACTGTGGGCCCCTGGT...CTTTGTGGGATTCAGTGTTATCCCCCAGGAACTGTCTGCCCCCACCAAGGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR CCA 90 bp TTTCCAGGTGTCTGGATGGCCCGGGGTAGCTTCTGGCTGGTCAGCACCAGAGCACAGTGCCCCAGGCCATaGCAGCTAGGTCCCCTACAA +
Preference number: 4 (lower is better)
Translates to: FPGVWMARGSFWLVSTRAQCPRP*QLGPLQ
Trigger: TTGTAGGGGACCTAGCTGCCATGGCCTGGGGCACTG...TGCTCTGGTGCTGACCAGCCAGAAGCTACCCCGGGCCATCCAGACACCTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR GCA 90 bp AGGCCACTGGGATCAGCACCGAAAGGAGCCGGAAGACAGGGAGAGGAGTGTGAGAGCCCCATCATGCCCTaGAGCAGCCCAGATACTACC +
Preference number: 4 (lower is better)
Translates to: RPLGSAPKGAGRQGEECESPIMP*SSPDTT
Trigger: GGTAGTATCTGGGCTGCTGCAGGGCATGATGGGGCT...CTCACACTCCTCTCCCTGTCTTCCGGCTCCTTTCGGTGCTGATCCCAGTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR CCA 90 bp GCCGGAAGACAGGGAGAGGAGTGTGAGTTGATGACGTTGAAGCTCGCCTCCAGGTCCATGGTGCCTTGGTaGGGGCAGACAGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: AGRQGEECELMTLKLASRSMVPW*GQTVPG
Trigger: CCCAGGAACTGTCTGCCCCCACCAAGGCACCATGGA...CCTGGAGGCGAGCTTCAACGTCATCAACTCACACTCCTCTCCCTGTCTTCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR CCA 90 bp AGACAGGGAGAGGAGTGTGAGTTGATGACGTTGAAGCTCGCCTCCAGGGGCACATTCCAGGTGTCTGGATaGCCCGGGGTAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: RQGEECELMTLKLASRGTFQVSG*PGVASG
Trigger: GCCAGAAGCTACCCCGGGCCATCCAGACACCTGGAA...TGTGCCCCTGGAGGCGAGCTTCAACGTCATCAACTCACACTCCTCTCCCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR CCA 90 bp GGGAGGAGTTTCCAGGTGTCTGGATGGCCCGGGGTAGCTTCTGGCTGGTCAGCAAAATCCATGGTGCCTTaGTGGGGGCAGACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: GRSFQVSGWPGVASGWSAKSMVP*WGQTVP
Trigger: AGGAACTGTCTGCCCCCACCAAGGCACCATGGATTT...TGCTGACCAGCCAGAAGCTACCCCGGGCCATCCAGACACCTGGAAACTCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR TCA 90 bp GTGAGGCAGCCAAATCCATGGTGCCTTGGTGGGGGCAGACAGTTCCTGGGGGATTACAAAGGTGCAGCATaGGGGAGGAGTTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: VRQPNPWCLGGGRQFLGDYKGAA*GRSFQV
Trigger: CACCTGGAAACTCCTCCCTCATGCTGCACCTTTGTA...ATCCCCCAGGAACTGTCTGCCCCCACCAAGGCACCATGGATTTGGCTGCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR GCA 90 bp GGAGAGGAGTGTGAGTTGATGACGTTGAAGCTCGCCTCCAGGGGCACACATGAACCCAGATACTACCACTaGCCCGGACACCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GEECELMTLKLASRGTHEPRYYH*PGHLLE
Trigger: CTCCAGGAGGTGTCCGGGGCAGTGGTAGTATCTGGG...TTCATGTGTGCCCCTGGAGGCGAGCTTCAACGTCATCAACTCACACTCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR CCA 90 bp TGCCTTGGTGGGGGCAGACAGTTCCTGGGGGATAACACTGAATCCCACAAAGGCGAGTTTCCAGGTGTCTaGATGGCCCGGGGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: CLGGGRQFLGDNTESHKGEFPGV*MARGSF
Trigger: GAAGCTACCCCGGGCCATCCAGACACCTGGAAACTC...GCCTTTGTGGGATTCAGTGTTATCCCCCAGGAACTGTCTGCCCCCACCAAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000414999.5
3UTR CAA 72 bp GCCGGAAGACAGGGAGAGGAGTGTGAGTTGATGACGTaGAAGCTCGCCTCCAGGGGCACACATGAAACTGGC +
Preference number: 4 (lower is better)
Translates to: AGRQGEECELMT*KLASRGTHETG
Trigger: GCCAGTTTCATGTGTGCCCCTGGAGGCGAGCTTCAACGTCATCAACTCACACTCCTCTCCCTGTCTTCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR TCA 90 bp CAAGGCCAACCCCCAGTGTGTGAAGCAGAACTGGGCTACCTCCCTGTGGGCAGAACAGGGAGAGGAGTGTaGGTTGATGACGTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: QGQPPVCEAELGYLPVGRTGRGV*VDDVEA
Trigger: AGCTTCAACGTCATCAACTCACACTCCTCTCCCTGT...TCTGCCCACAGGGAGGTAGCCCAGTTCTGCTTCACACACTGGGGGTTGGCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR GCA 90 bp TTGAGACGGCATGGACCCTGTCTTATCCCTGTAGTTCCAGGACCTTGCACATGGCCCAGATACTACCACTaGCCCGGACACCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LRRHGPCLIPVVPGPCTWPRYYH*PGHLLE
Trigger: CTCCAGGAGGTGTCCGGGGCAGTGGTAGTATCTGGG...CCATGTGCAAGGTCCTGGAACTACAGGGATAAGACAGGGTCCATGCCGTCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp AGAAACAATCCACACACAGGCCACTGGGATCAGCACCGAAAGGAGCCGGAAGACCAGCCAAATCCATGGTaGCTTGGTGGGGGCAGACAG +
Preference number: 4 (lower is better)
Translates to: RNNPHTGHWDQHRKEPEDQPNPW*LGGGRQ
Trigger: CTGTCTGCCCCCACCAAGGCACCATGGATTTGGCTG...GTCTTCCGGCTCCTTTCGGTGCTGATCCCAGTGGCCTGTGTGTGGATTGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR GCA 90 bp TGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGGTGGGGGAGGCAAATaGAGCAGCCGGCCACACAGG +
Preference number: 4 (lower is better)
Translates to: WELTLQQMRVRAKLTRAEGGGGK*SSRPHR
Trigger: CCTGTGTGGCCGGCTGCTGCATTTGCCTCCCCCACC...TTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAGCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTCTGGGCTCAGCCCTCGACTaGAGGCATGTGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LQQMRVRAKLTRAEVGVLGSALD*RHVEVG
Trigger: CCCCACCTCCACATGCCTGCAGTCGAGGGCTGAGCC...CAGAACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp ATGAAACTGGCAGGAGCCCAGGTGCTGAGAACAGACCACCATGAGCAGGATAACGCCCCGGACACCTCCTaGAGAGAAGTGTTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: MKLAGAQVLRTDHHEQDNAPDTS*REVFQC
Trigger: GCACTGGAACACTTCTCTCCAGGAGGTGTCCGGGGC...GTTATCCTGCTCATGGTGGTCTGTTCTCAGCACCTGGGCTCCTGCCAGTTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR CCA 90 bp CATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGACCAGGGGCCCACAGTaGGGGAACACGTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: HILCLQERTVWELTLQQMTRGPQ*GNTWPG
Trigger: TCCCGGCCACGTGTTCCCCCACTGTGGGCCCCTGGT...CATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGACCAGGGGCCCACAGTaGGGGAACACGTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: HTHILCLQERTVWELTLQTRGPQ*GNTWPG
Trigger: TCCCGGCCACGTGTTCCCCCACTGTGGGCCCCTGGT...CTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp CACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGGCTCCAGCCTGTGCTaGACAGGACTGGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: HTYPLPTRKNSLGADSPAGSSLC*TGLGLP
Trigger: GGGAAGCCCCAGTCCTGTTCAGCACAGGCTGGAGCC...TGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp TTGAGACGGCATGGACCCTGTCTTATCCCTGTAGTTCCAGGACCTTGCACATGGGGAAGTCTGTACACTTaGGCAGCCTTCTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LRRHGPCLIPVVPGPCTWGSLYT*AAFSLG
Trigger: GCCCAGGGAGAAGGCTGCTCAAGTGTACAGACTTCC...CCATGTGCAAGGTCCTGGAACTACAGGGATAAGACAGGGTCCATGCCGTCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp TGCCTTGGTGGGGGCAGACAGTTCCTGGGGGATAACACTGAATCCCACAAAGGCGGTCCCCTACAAAGGTaGAGCATGAGGGAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: CLGGGRQFLGDNTESHKGGPLQR*SMREEF
Trigger: AAACTCCTCCCTCATGCTGCACCTTTGTAGGGGACC...GCCTTTGTGGGATTCAGTGTTATCCCCCAGGAACTGTCTGCCCCCACCAAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR GCA 90 bp ATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTGGGCAGAGAGCCCTaGCACAACCAGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ILCLQERTVWELTLQQMRVGREP*HNQAGS
Trigger: GCTCCCAGCCTGGTTGTGGCAGGGCTCTCTGCCCAC...TCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGTGGGCAGAGAGCCCTaGCACAACCAGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: HTYPLPTRKNSLGADSPAVGREP*HNQAGS
Trigger: GCTCCCAGCCTGGTTGTGGCAGGGCTCTCTGCCCAC...TGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp AATGGAACCTCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACGCCCGGCCAGCACACTaGCCAGCCCCTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: NGTSRQSHVIHTHISSAYARPAH*PAPPGS
Trigger: TGAGCCTGGAGGGGCTGGGCAGTGTGCTGGCCGGGC...GTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGAGGTTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp ACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCTGCCACAACCAGGCTaGGAGCCAGCACCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: THTHILCLQERTVWELTLLPQPG*EPAPGA
Trigger: GGCCCCTGGTGCTGGCTCCCAGCCTGGTTGTGGCAG...GAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp AGAAACAATCCACACACAGGCCACTGGGATCAGCACCGAAAGGAGCCGGAAGACTGTGTGAAGCAGAACTaGGCTACCTCCCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RNNPHTGHWDQHRKEPEDCVKQN*ATSLWA
Trigger: TGCCCACAGGGAGGTAGCCCAGTTCTGCTTCACACA...GTCTTCCGGCTCCTTTCGGTGCTGATCCCAGTGGCCTGTGTGTGGATTGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR CCA 90 bp ATGAAACTGGCAGGAGCCCAGGTGCTGAGAACAGACCACCATGAGCAGGATAACAGGCAGCCAAATCCATaGTGCCTTGGTGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: MKLAGAQVLRTDHHEQDNRQPNP*CLGGGR
Trigger: TCTGCCCCCACCAAGGCACCATGGATTTGGCTGCCT...GTTATCCTGCTCATGGTGGTCTGTTCTCAGCACCTGGGCTCCTGCCAGTTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR CCA 90 bp CTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTCTGGGAGCTGAGCCAACCTaGGGGAGAGTCCAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LQQMRVRAKLTRAEVGVLGAEPT*GRVQAP
Trigger: TGGGGCTTGGACTCTCCCCCAGGTTGGCTCAGCTCC...CAGAACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp ATGAAACTGGCAGGAGCCCAGGTGCTGAGAACAGACCACCATGAGCAGGATAACCCACACACAGGCCACTaGGATCAGCACCGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: MKLAGAQVLRTDHHEQDNPHTGH*DQHRKE
Trigger: CTCCTTTCGGTGCTGATCCCAGTGGCCTGTGTGTGG...GTTATCCTGCTCATGGTGGTCTGTTCTCAGCACCTGGGCTCCTGCCAGTTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR CCA 90 bp CTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCAGCCCAGGGAACTGGTaGAGGCTGCCAAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: LTLQQMRVRAKLTRAEVGSPGNW*RLPRPW
Trigger: CCATGGCCTTGGCAGCCTCCACCAGTTCCCTGGGCT...GCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp TGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAATGGTGGTGAGGAGCTaGGCCAACCTGGGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: WELTLQQMRVRAKLTRAEMVVRS*ANLGES
Trigger: ACTCTCCCCCAGGTTGGCTCAGCTCCTCACCACCAT...TTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAGCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp ATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGCAGTGGGATGGTGGTaGGGAGCTGAGCCAACCTGG +
Preference number: 4 (lower is better)
Translates to: ILCLQERTVWELTLQQMRAVGWW*GAEPTW
Trigger: CCAGGTTGGCTCAGCTCCTCACCACCATCCCACTGC...TCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp TGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGGAGATGGTAGCCCTTaGCCTAGGCCTCGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: WELTLQQMRVRAKLTRAEGDGSP*PRPRSS
Trigger: GCTTGAGCGAGGCCTAGGTCAAGGGCTACCATCTCC...TTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAGCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp TTGAGACGGCATGGACCCTGTCTTATCCCTGTAGTTCCAGGACCTTGCACATGGTTCCACTCACCTGGGTaGGGCAGCCAAATCCATGGT +
Preference number: 4 (lower is better)
Translates to: LRRHGPCLIPVVPGPCTWFHSPG*GSQIHG
Trigger: ACCATGGATTTGGCTGCCTCACCCAGGTGAGTGGAA...CCATGTGCAAGGTCCTGGAACTACAGGGATAAGACAGGGTCCATGCCGTCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409878.8
CDS-3UTR GCA 90 bp TGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAACTCCTGGGGAGAGACTaGAAAGCAGGAGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: WELTLQQMRVRAKLTRAELLGRD*KAGAGG
Trigger: CCCACCTGCTCCTGCTTTGCAGTCTCTCCCCAGGAG...TTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAGCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGGAACTGGTGGAGGCTaGCAAGGCCATGGAGATGCC +
Preference number: 4 (lower is better)
Translates to: LTLQQMRVRAKLTRAEVGGTGGG*QGHGDA
Trigger: GGCATCTCCATGGCCTTGGCAGCCTCCACCAGTTCC...GCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CTGGAACAGTTAGGCCTAATTAAGACAAGGAAAGGCAACCCACCCTATTGGGAAGGCTCAGCCCTCGACTaGAGGCATGTGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LEQLGLIKTRKGNPPYWEGSALD*RHVEVG
Trigger: CCCCACCTCCACATGCCTGCAGTCGAGGGCTGAGCC...TTCCCAATAGGGTGGGTTGCCTTTCCTTGTCTTAATTAGGCCTAACTGTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409878.8
CDS-3UTR GCA 90 bp CTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTCTGGGAAGCTGGATGCAGTaGCCATGGGGCTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LQQMRVRAKLTRAEVGVLGSWMQ*PWGFPA
Trigger: TGCTGGGAAGCCCCATGGGCACTGCATCCAGCTTCC...CAGAACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp ACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGGGGCCAGGGCATCCTaGGAGCCCACTGATCGGAGT +
Preference number: 4 (lower is better)
Translates to: THTYPLPTRKNSLGADSPGARAS*EPTDRS
Trigger: ACTCCGATCAGTGGGCTCCCAGGATGCCCTGGCCCC...TGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGGTCCCAAGAGTGGGTaGAGGGATTCTGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: WELTLQQMRVRAKLTRAEGPKSG*RDSGEQ
Trigger: CTGCTCCCCAGAATCCCTCCACCCACTCTTGGGACC...TTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAGCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTGCCCGGGGTAGCTTCTaGCTGGTCAGCACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LCLQERTVWELTLQQMRVARGSF*LVSTRA
Trigger: TGCTCTGGTGCTGACCAGCCAGAAGCTACCCCGGGC...AACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTCTGTTCCAGGTGTCTGGATaGCCCGGGGTAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LQQMRVRAKLTRAEVGVLFQVSG*PGVASG
Trigger: GCCAGAAGCTACCCCGGGCCATCCAGACACCTGGAA...CAGAACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGCCCAGGGAACTGGTaGAGGCTGCCAAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: LCLQERTVWELTLQQMRVSPGNW*RLPRPW
Trigger: CCATGGCCTTGGCAGCCTCCACCAGTTCCCTGGGCT...AACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCCACGTTGGGGAAGCTaGATGCAGTGCCCATGGGGC +
Preference number: 4 (lower is better)
Translates to: HTHILCLQERTVWELTLQPRWGS*MQCPWG
Trigger: GCCCCATGGGCACTGCATCCAGCTTCCCCAACGTGG...CTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp CTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTGCTGGGATTGAGGGGTaGTCGGCTCATGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LCLQERTVWELTLQQMRVAGIEG*SAHAAL
Trigger: CAAGGCAGCATGAGCCGATCACCCCTCAATCCCAGC...AACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp CTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTGGAGTTGGCTGGGATTaGGGGGTGATCGGCTCATGC +
Preference number: 4 (lower is better)
Translates to: LCLQERTVWELTLQQMRVGVGWD*GVIGSC
Trigger: GCATGAGCCGATCACCCCTCAATCCCAGCCAACTCC...AACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp ATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGAGCCAGAAGACAGCTaGGGCCCCAAGGCAGAGATC +
Preference number: 4 (lower is better)
Translates to: ILCLQERTVWELTLQQMREPEDS*GPKAEI
Trigger: GATCTCTGCCTTGGGGCCTCAGCTGTCTTCTGGCTC...TCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp TGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGAGCCAGAAGACAGCTaGGGCCCCAAGGCAGAGATC +
Preference number: 4 (lower is better)
Translates to: CLQERTVWELTLQQMRVREPEDS*GPKAEI
Trigger: GATCTCTGCCTTGGGGCCTCAGCTGTCTTCTGGCTC...CCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp CTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTATGGTGGTGAGGAGCTaGGCCAACCTGGGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: LCLQERTVWELTLQQMRVMVVRS*ANLGES
Trigger: ACTCTCCCCCAGGTTGGCTCAGCTCCTCACCACCAT...AACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp AATGGAACCTCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACGGCTCCAGCCTGTGCTaGACAGGACTGGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: NGTSRQSHVIHTHISSAYGSSLC*TGLGLP
Trigger: GGGAAGCCCCAGTCCTGTTCAGCACAGGCTGGAGCC...GTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGAGGTTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp ATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGGAGATGGTAGCCCTTaGCCTAGGCCTCGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: ILCLQERTVWELTLQQMRGDGSP*PRPRSS
Trigger: GCTTGAGCGAGGCCTAGGTCAAGGGCTACCATCTCC...TCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp TGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGGAAGTCTGTACACTTaGGCAGCCTTCTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: WELTLQQMRVRAKLTRAEGSLYT*AAFSLG
Trigger: GCCCAGGGAGAAGGCTGCTCAAGTGTACAGACTTCC...TTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAGCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGCCCAGATACTACCACTaGCCCGGACACCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HILCLQERTVWELTLQQMPRYYH*PGHLLE
Trigger: CTCCAGGAGGTGTCCGGGGCAGTGGTAGTATCTGGG...CATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTCTGCAGCCAAATCCATGGTaGCTTGGTGGGGGCAGACAG +
Preference number: 4 (lower is better)
Translates to: LQQMRVRAKLTRAEVGVLQPNPW*LGGGRQ
Trigger: CTGTCTGCCCCCACCAAGGCACCATGGATTTGGCTG...CAGAACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCACCAAGGCCATGGAGATaGCTGCAGCCAGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: HTYPLPTRKNSLGADSPAPRPWR*LQPELW
Trigger: CCAGAGCTCTGGCTGCAGGCATCTCCATGGCCTTGG...TGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTGGAACTGGTGGAGGCTaGCAAGGCCATGGAGATGCC +
Preference number: 4 (lower is better)
Translates to: LCLQERTVWELTLQQMRVGTGGG*QGHGDA
Trigger: GGCATCTCCATGGCCTTGGCAGCCTCCACCAGTTCC...AACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp TACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTGGTGGGGGAGGCAAATaGAGCAGCCGGCCACACAGG +
Preference number: 4 (lower is better)
Translates to: YTHTYPLPTRKNSLGADSGGGGK*SSRPHR
Trigger: CCTGTGTGGCCGGCTGCTGCATTTGCCTCCCCCACC...AGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp TCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAAGCCCGGCCAGCACACTaGCCAGCCCCTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SRQSHVIHTHISSAYKKEARPAH*PAPPGS
Trigger: TGAGCCTGGAGGGGCTGGGCAGTGTGCTGGCCGGGC...TTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp TGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGGAAGCTGGATGCAGTaGCCATGGGGCTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: CLQERTVWELTLQQMRVRGSWMQ*PWGFPA
Trigger: TGCTGGGAAGCCCCATGGGCACTGCATCCAGCTTCC...CCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTGTTGGGGAAGCTGGATaGAGTGCCCATGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LCLQERTVWELTLQQMRVVGEAG*SAHGAS
Trigger: GGAAGCCCCATGGGCACTGCATCCAGCTTCCCCAAC...AACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGTTGGGGAAGCTGGATaGAGTGCCCATGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: HTYPLPTRKNSLGADSPAVGEAG*SAHGAS
Trigger: GGAAGCCCCATGGGCACTGCATCCAGCTTCCCCAAC...TGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGGGTCCCAAGAGTGGGTaGAGGGATTCTGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: HILCLQERTVWELTLQQMGPKSG*RDSGEQ
Trigger: CTGCTCCCCAGAATCCCTCCACCCACTCTTGGGACC...CATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCACAGTGCCCCAGGCCATaGCAGCTAGGTCCCCTACAA +
Preference number: 4 (lower is better)
Translates to: HTYPLPTRKNSLGADSPAQCPRP*QLGPLQ
Trigger: TTGTAGGGGACCTAGCTGCCATGGCCTGGGGCACTG...TGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGCAGTGCCCCAGGCCATaGCAGCTAGGTCCCCTACAA +
Preference number: 4 (lower is better)
Translates to: HILCLQERTVWELTLQQMQCPRP*QLGPLQ
Trigger: TTGTAGGGGACCTAGCTGCCATGGCCTGGGGCACTG...CATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp GTCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGCAGTGGGGGAACACGTaGCCGGGACTCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VPCNTHTHILCLQERTVWQWGNT*PGLPSS
Trigger: GCTGCTGGGGAGTCCCGGCCACGTGTTCCCCCACTG...CCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCAGTGGGGGAACACGTaGCCGGGACTCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PCNTHTHILCLQERTVWEQWGNT*PGLPSS
Trigger: GCTGCTGGGGAGTCCCGGCCACGTGTTCCCCCACTG...CTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGACCAGGGGCCCACAGTaGGGGAACACGTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: SHVIHTHISSAYKKEQFGTRGPQ*GNTWPG
Trigger: TCCCGGCCACGTGTTCCCCCACTGTGGGCCCCTGGT...CCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGCCACAACCAGGCTaGGAGCCAGCACCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PCNTHTHILCLQERTVWELPQPG*EPAPGA
Trigger: GGCCCCTGGTGCTGGCTCCCAGCCTGGTTGTGGCAG...CTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCAGGCAGCCAAATCCATaGTGCCTTGGTGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LTLQQMRVRAKLTRAEVGRQPNP*CLGGGR
Trigger: TCTGCCCCCACCAAGGCACCATGGATTTGGCTGCCT...GCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGAGGGTCTTCAGGCAGTaGGCAGAGGCAGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HTHILCLQERTVWELTLQRVFRQ*AEAVER
Trigger: CCTCTCCACTGCCTCTGCCCACTGCCTGAAGACCCT...CTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAACCACACACAGGCCACTaGGATCAGCACCGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: WELTLQQMRVRAKLTRAEPHTGH*DQHRKE
Trigger: CTCCTTTCGGTGCTGATCCCAGTGGCCTGTGTGTGG...TTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAGCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCCTGCAGCCAGAGCTCTaGGCGTCAGCAAAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: LTLQQMRVRAKLTRAEVGLQPEL*ASAKAN
Trigger: ATTGGCCTTTGCTGACGCCCAGAGCTCTGGCTGCAG...GCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGGCTGCCAAGGCCATaGAGATGCCTGCAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: HILCLQERTVWELTLQQMRLPRP*RCLQPE
Trigger: CTCTGGCTGCAGGCATCTCCATGGCCTTGGCAGCCT...CATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp ACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCCACGTTGGGGAAGCTaGATGCAGTGCCCATGGGGC +
Preference number: 4 (lower is better)
Translates to: THTHILCLQERTVWELTLPRWGS*MQCPWG
Trigger: GCCCCATGGGCACTGCATCCAGCTTCCCCAACGTGG...GAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp CACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGATCCTGGGAGCCCACTaGTCGGAGTTGGCTGGGATT +
Preference number: 4 (lower is better)
Translates to: HTHILCLQERTVWELTLQILGAH*SELAGI
Trigger: AATCCCAGCCAACTCCGATCAGTGGGCTCCCAGGAT...CTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp TTGAGACGGCATGGACCCTGTCTTATCCCTGTAGTTCCAGGACCTTGCACATGGACAGGGAGAGGAGTGTaGGTTGATGACGTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LRRHGPCLIPVVPGPCTWTGRGV*VDDVEA
Trigger: AGCTTCAACGTCATCAACTCACACTCCTCTCCCTGT...CCATGTGCAAGGTCCTGGAACTACAGGGATAAGACAGGGTCCATGCCGTCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR TCA 90 bp GTACACAGGCAAAATCTCAATCATTCATGGTCCACTAAATCATGGCCTCTGCTCGCAGTGGGATGGTGGTaGGGAGCTGAGCCAACCTGG +
Preference number: 4 (lower is better)
Translates to: VHRQNLNHSWSTKSWPLLAVGWW*GAEPTW
Trigger: CCAGGTTGGCTCAGCTCCTCACCACCATCCCACTGC...GAGCAGAGGCCATGATTTAGTGGACCATGAATGATTGAGATTTTGCCTGTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR TCA 90 bp CTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTCTGTTCCACTCACCTGGGTaGGGCAGCCAAATCCATGGT +
Preference number: 4 (lower is better)
Translates to: LQQMRVRAKLTRAEVGVLFHSPG*GSQIHG
Trigger: ACCATGGATTTGGCTGCCTCACCCAGGTGAGTGGAA...CAGAACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTCTGCAAGAGGCAGCCTGCTaGCCATCCAAGTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LQQMRVRAKLTRAEVGVLQEAAC*PSKFAG
Trigger: TCCTGCAAACTTGGATGGGCAGCAGGCTGCCTCTTG...CAGAACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAAGCCCCATCATGCCCTaGAGCAGCCCAGATACTACC +
Preference number: 4 (lower is better)
Translates to: HTYPLPTRKNSLGADSPASPIMP*SSPDTT
Trigger: GGTAGTATCTGGGCTGCTGCAGGGCATGATGGGGCT...TGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGAGCCCCATCATGCCCTaGAGCAGCCCAGATACTACC +
Preference number: 4 (lower is better)
Translates to: HTHILCLQERTVWELTLQSPIMP*SSPDTT
Trigger: GGTAGTATCTGGGCTGCTGCAGGGCATGATGGGGCT...CTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGCAGCCAAATCCATGGTaGCTTGGTGGGGGCAGACAG +
Preference number: 4 (lower is better)
Translates to: HILCLQERTVWELTLQQMQPNPW*LGGGRQ
Trigger: CTGTCTGCCCCCACCAAGGCACCATGGATTTGGCTG...CATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTCTGGCCAGGCAGCAAGTCTaGCATCTCTTCTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LQQMRVRAKLTRAEVGVLARQQV*HLFWLR
Trigger: TCTGAGCCAGAAGAGATGGCAGACTTGCTGCCTGGC...CAGAACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp TGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGCATGAGGGAGGCCCTTaGCCTTGCTCTGTGCTCACA +
Preference number: 4 (lower is better)
Translates to: CLQERTVWELTLQQMRVRHEGGP*PCSVLT
Trigger: TGTGAGCACAGAGCAAGGGCAAGGGCCTCCCTCATG...CCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455516.6
CDS-3UTR CCA 90 bp CTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTGAGTTTCCAGGTGTCTaGATGGCCCGGGGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: LCLQERTVWELTLQQMRVEFPGV*MARGSF
Trigger: GAAGCTACCCCGGGCCATCCAGACACCTGGAAACTC...AACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp ACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTGAGTTTCCAGGTGTCTaGATGGCCCGGGGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: TLQQMRVRAKLTRAEVGVEFPGV*MARGSF
Trigger: GAAGCTACCCCGGGCCATCCAGACACCTGGAAACTC...AACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp CTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGCAGCCAAATCCATaGTGCCTTGGTGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LCLQERTVWELTLQQMRVRQPNP*CLGGGR
Trigger: TCTGCCCCCACCAAGGCACCATGGATTTGGCTGCCT...AACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGCCACTTTGCCCACGTTaGGGAAGCTGGATGCAGTGC +
Preference number: 4 (lower is better)
Translates to: CLQERTVWELTLQQMRVRPLCPR*GSWMQC
Trigger: GCACTGCATCCAGCTTCCCCAACGTGGGCAAAGTGG...CCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp ACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTCAGTTTCCAGGTGTCTaGATGGCCCGGGGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: TLQQMRVRAKLTRAEVGVQFPGV*MARGSF
Trigger: GAAGCTACCCCGGGCCATCCAGACACCTGGAAACTG...AACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455516.6
CDS-3UTR TCA 90 bp TCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGGCAGTGGGATGGTGGTaGGGAGCTGAGCCAACCTGG +
Preference number: 4 (lower is better)
Translates to: SHVIHTHISSAYKKEQFGAVGWW*GAEPTW
Trigger: CCAGGTTGGCTCAGCTCCTCACCACCATCCCACTGC...CCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp TACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTGGAGATGGTAGCCCTTaGCCTAGGCCTCGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: YTHTYPLPTRKNSLGADSGDGSP*PRPRSS
Trigger: GCTTGAGCGAGGCCTAGGTCAAGGGCTACCATCTCC...AGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp ATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGAGCCTCTTGGGCAGTaGAAGGAGATGGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: ILCLQERTVWELTLQQMREPLGQ*KEMVAL
Trigger: AAGGGCTACCATCTCCTTTCACTGCCCAAGAGGCTC...TCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp ACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCTTCTCCCTGGGCTTCTaGGGCATTCGAGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: THTHILCLQERTVWELTLFSLGF*GIRASW
Trigger: CCAAGAGGCTCGAATGCCTCAGAAGCCCAGGGAGAA...GAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCGGCTCATGCTGCCTTaGCTTTCGCTTTGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: HTHILCLQERTVWELTLQRLMLP*LSLCLG
Trigger: GCCAAGACAAAGCGAAAGGCAAGGCAGCATGAGCCG...CTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGCCATGACCAAGACATaGTGCAGAGCCAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: LTLQQMRVRAKLTRAEVGAMTKT*CRARRQ
Trigger: CTGTCTTCTGGCTCTGCAGCATGTCTTGGTCATGGC...GCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp ACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTCAAGAGGCAGCCTGCTaGCCATCCAAGTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TLQQMRVRAKLTRAEVGVQEAAC*PSKFAG
Trigger: TCCTGCAAACTTGGATGGGCAGCAGGCTGCCTCTTG...AACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp ACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTGGACAAGAGGCAGCCTaGTGCCCATCCAAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: TLQQMRVRAKLTRAEVGVGQEAA*CPSKFA
Trigger: TGCAAACTTGGATGGGCAGCAGGCTGCCTCTTGTCC...AACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp ATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGGACAAGAGGCAGCCTaGTGCCCATCCAAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: ILCLQERTVWELTLQQMRGQEAA*CPSKFA
Trigger: TGCAAACTTGGATGGGCAGCAGGCTGCCTCTTGTCC...TCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp ACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTAGAGAAGTGTTCCAGTaGCCCAGGCCATGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: TLQQMRVRAKLTRAEVGVREVFQ*PRPWQL
Trigger: TAGCTGCCATGGCCTGGGGCACTGGAACACTTCTCT...AACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp GTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTCATGGTCCACTGTGGGCAGAGAGCCCTaGCACAACCAGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VQVALIVHRQNLNHSWSTVGREP*HNQAGS
Trigger: GCTCCCAGCCTGGTTGTGGCAGGGCTCTCTGCCCAC...AGTGGACCATGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp CTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTGCCAGGCAGCAAGTCTaGCATCTCTTCTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LCLQERTVWELTLQQMRVARQQV*HLFWLR
Trigger: TCTGAGCCAGAAGAGATGGCAGACTTGCTGCCTGGC...AACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp AATGGAACCTCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACCCAAGGCCATGGAGATaGCTGCAGCCAGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: NGTSRQSHVIHTHISSAYPRPWR*LQPELW
Trigger: CCAGAGCTCTGGCTGCAGGCATCTCCATGGCCTTGG...GTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGAGGTTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGCCTTTCGCTTTGTCTTaGCTGCCCGGGACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: CLQERTVWELTLQQMRVRPFALS*LPGTRV
Trigger: AACTCTGGTCCCGGGCAGCCAAGACAAAGCGAAAGG...CCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTCCTTTCGCTTTGTCTTaGCTGCCCGGGACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LCLQERTVWELTLQQMRVPFALS*LPGTRV
Trigger: AACTCTGGTCCCGGGCAGCCAAGACAAAGCGAAAGG...AACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAAGGGGCCAGGGCATCCTaGGAGCCCACTGATCGGAGT +
Preference number: 4 (lower is better)
Translates to: SRQSHVIHTHISSAYKKEGARAS*EPTDRS
Trigger: ACTCCGATCAGTGGGCTCCCAGGATGCCCTGGCCCC...TTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGAAAGGGTCCCAAGAGTaGGTGGAGGGATTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CLQERTVWELTLQQMRVRKGSQE*VEGFWG
Trigger: TCCCCAGAATCCCTCCACCCACTCTTGGGACCCTTT...CCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp GTCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGCCCGGGGTAGCTTCTaGCTGGTCAGCACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: VPCNTHTHILCLQERTVWARGSF*LVSTRA
Trigger: TGCTCTGGTGCTGACCAGCCAGAAGCTACCCCGGGC...CCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp GTACACAGGCAAAATCTCAATCATTCATGGTCCACTAAATCATGGCCTCTGCTCTTCCAGGTGTCTGGATaGCCCGGGGTAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: VHRQNLNHSWSTKSWPLLFQVSG*PGVASG
Trigger: GCCAGAAGCTACCCCGGGCCATCCAGACACCTGGAA...GAGCAGAGGCCATGATTTAGTGGACCATGAATGATTGAGATTTTGCCTGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp ATCTCAATCATTCATGGTCCACTAAATCATGGCCTCTGCTCTGGAACAGTTAGGCAGTGCCCCAGGCCATaGCAGCTAGGTCCCCTACAA +
Preference number: 4 (lower is better)
Translates to: ISIIHGPLNHGLCSGTVRQCPRP*QLGPLQ
Trigger: TTGTAGGGGACCTAGCTGCCATGGCCTGGGGCACTG...CCTAACTGTTCCAGAGCAGAGGCCATGATTTAGTGGACCATGAATGATTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp CATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGTCCATGGTGCCTTGGTaGGGGCAGACAGTTCCGAAA +
Preference number: 4 (lower is better)
Translates to: HILCLQERTVWELTLQQMSMVPW*GQTVPK
Trigger: TTTCGGAACTGTCTGCCCCCACCAAGGCACCATGGA...CATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295738.11
CDS-3UTR CCA 90 bp ATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAAAATCCATGGTGCCTTaGTGGGGGCAGACAGTTCCG +
Preference number: 4 (lower is better)
Translates to: ILCLQERTVWELTLQQMRKSMVP*WGQTVP
Trigger: CGGAACTGTCTGCCCCCACCAAGGCACCATGGATTT...TCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295738.11
CDS-3UTR CCA 90 bp TGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGGGAGCTGAGCCAACCTaGGGGAGAGTCCAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: CNTHTHILCLQERTVWELGAEPT*GRVQAP
Trigger: TGGGGCTTGGACTCTCCCCCAGGTTGGCTCAGCTCC...CAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTAGGGTCTTCAGGCAGTaGGCAGAGGCAGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: YTHTYPLPTRKNSLGADSRVFRQ*AEAVER
Trigger: CCTCTCCACTGCCTCTGCCCACTGCCTGAAGACCCT...AGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp AATGGAACCTCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACTCCATGGTGCCTTGGTaGGGGCAGACAGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: NGTSRQSHVIHTHISSAYSMVPW*GQTVPG
Trigger: CCCAGGAACTGTCTGCCCCCACCAAGGCACCATGGA...GTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGAGGTTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAAAATCCATGGTGCCTTaGTGGGGGCAGACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: WELTLQQMRVRAKLTRAEKSMVP*WGQTVP
Trigger: AGGAACTGTCTGCCCCCACCAAGGCACCATGGATTT...TTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAGCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp GTCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGGAGTTGGCTGGGATTaGGGGGTGATCGGCTCATGC +
Preference number: 4 (lower is better)
Translates to: VPCNTHTHILCLQERTVWGVGWD*GVIGSC
Trigger: GCATGAGCCGATCACCCCTCAATCCCAGCCAACTCC...CCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp GTCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCCAGAAGACAGCTaGGGCCCCAAGGCAGAGATC +
Preference number: 4 (lower is better)
Translates to: VPCNTHTHILCLQERTVWEPEDS*GPKAEI
Trigger: GATCTCTGCCTTGGGGCCTCAGCTGTCTTCTGGCTC...CCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp TGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGAGAGCAGAGAAGCCATaGCCAAGACATGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: CLQERTVWELTLQQMRVRRAEKP*PRHAAE
Trigger: CTCTGCAGCATGTCTTGGTCATGGCTTCTCTGCTCT...CCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp TTAGTAATTACAAAGGTCTTTTTAAACCGTAAATGCCTTGAGACGGCATGGACCGGCTCCAGCCTGTGCTaGACAGGACTGGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LVITKVFLNRKCLETAWTGSSLC*TGLGLP
Trigger: GGGAAGCCCCAGTCCTGTTCAGCACAGGCTGGAGCC...GGTCCATGCCGTCTCAAGGCATTTACGGTTTAAAAAGACCTTTGTAATTACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR TCA 90 bp ACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGAGCCTCTTGGGCAGTaGAAGGAGATGGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: THTYPLPTRKNSLGADSPEPLGQ*KEMVAL
Trigger: AAGGGCTACCATCTCCTTTCACTGCCCAAGAGGCTC...TGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp AATGGAACCTCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACTTCTCCCTGGGCTTCTaGGGCATTCGAGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: NGTSRQSHVIHTHISSAYFSLGF*GIRASW
Trigger: CCAAGAGGCTCGAATGCCTCAGAAGCCCAGGGAGAA...GTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGAGGTTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCATGACCAAGACATGCTaGAGAGCCAGAAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: LTLQQMRVRAKLTRAEVGMTKTC*RARRQL
Trigger: CAGCTGTCTTCTGGCTCTGCAGCATGTCTTGGTCAT...GCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp TGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGCCATGACCAAGACATaGTGCAGAGCCAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: CLQERTVWELTLQQMRVRAMTKT*CRARRQ
Trigger: CTGTCTTCTGGCTCTGCAGCATGTCTTGGTCATGGC...CCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp TCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGCTCCTGGGGAGAGACTaGAAAGCAGGAGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SHVIHTHISSAYKKEQFGLLGRD*KAGAGG
Trigger: CCCACCTGCTCCTGCTTTGCAGTCTCTCCCCAGGAG...CCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp GTCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGCTCCTGGGGAGAGACTaGAAAGCAGGAGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VPCNTHTHILCLQERTVWLLGRD*KAGAGG
Trigger: CCCACCTGCTCCTGCTTTGCAGTCTCTCCCCAGGAG...CCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp GTCTTTTTAAACCGTAAATGCCTTGAGACGGCATGGACCCTGTCTTATCCCTGTCAAGAGGCAGCCTGCTaGCCATCCAAGTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: VFLNRKCLETAWTLSYPCQEAAC*PSKFAG
Trigger: TCCTGCAAACTTGGATGGGCAGCAGGCTGCCTCTTG...ACAGGGATAAGACAGGGTCCATGCCGTCTCAAGGCATTTACGGTTTAAAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp CATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGGGTCCCCTACAAAGGTaGAGCATGAGGGAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: HILCLQERTVWELTLQQMGPLQR*SMREEF
Trigger: AAACTCCTCCCTCATGCTGCACCTTTGTAGGGGACC...CATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp CCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCCCAGATACTACCACTaGCCCGGACACCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PCNTHTHILCLQERTVWEPRYYH*PGHLLE
Trigger: CTCCAGGAGGTGTCCGGGGCAGTGGTAGTATCTGGG...CTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCACTTGCCCTTGCTCTGTaGTCACAGTTTCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: HTYPLPTRKNSLGADSPALALAL*SQFPGV
Trigger: GACACCTGGAAACTGTGAGCACAGAGCAAGGGCAAG...TGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455516.6
CDS-3UTR GCA 90 bp AATGGAACCTCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACGGTCCCCTACAAAGGTaGAGCATGAGGGAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: NGTSRQSHVIHTHISSAYGPLQR*SMREAL
Trigger: AAGGGCCTCCCTCATGCTGCACCTTTGTAGGGGACC...GTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGAGGTTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455516.6
CDS-3UTR CCA 90 bp ACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATCCTTTCGCTTTGTCTTaGCTGCCCGGGACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: TYPLPTRKNSLGADSPADPFALS*LPGTRV
Trigger: AACTCTGGTCCCGGGCAGCCAAGACAAAGCGAAAGG...ATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp ACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCACCCACTGATCGGAGTTaGCTGGGATTGAGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: THTYPLPTRKNSLGADSPPTDRS*LGLRGD
Trigger: ATCACCCCTCAATCCCAGCCAACTCCGATCAGTGGG...TGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TTAGTAATTACAAAGGTCTTTTTAAACCGTAAATGCCTTGAGACGGCATGGACCGGGGCCAGGGCATCCTaGGAGCCCACTGATCGGAGT +
Preference number: 4 (lower is better)
Translates to: LVITKVFLNRKCLETAWTGARAS*EPTDRS
Trigger: ACTCCGATCAGTGGGCTCCCAGGATGCCCTGGCCCC...GGTCCATGCCGTCTCAAGGCATTTACGGTTTAAAAAGACCTTTGTAATTACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp TCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGGGTCCCAAGAGTGGGTaGAGGGATTCTGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SHVIHTHISSAYKKEQFGGPKSG*RDSGEQ
Trigger: CTGCTCCCCAGAATCCCTCCACCCACTCTTGGGACC...CCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp GTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTCATGGTCCACTGCCCGGGGTAGCTTCTaGCTGGTCAGCACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: VQVALIVHRQNLNHSWSTARGSF*LVSTRA
Trigger: TGCTCTGGTGCTGACCAGCCAGAAGCTACCCCGGGC...AGTGGACCATGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp GTGAATGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATGCCCCGGACACCTCCTaGAGAGAAGTGTTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: VNAGVQVALIVHRQNLNHAPDTS*REVFQC
Trigger: GCACTGGAACACTTCTCTCCAGGAGGTGTCCGGGGC...ATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp TCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGGCCCCGGACACCTCCTaGAGAGAAGTGTTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SHVIHTHISSAYKKEQFGAPDTS*REVFQC
Trigger: GCACTGGAACACTTCTCTCCAGGAGGTGTCCGGGGC...CCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CTGGAACAGTTAGGCCTAATTAAGACAAGGAAAGGCAACCCACCCTATTGGGAATGTGTGAAGCAGAACTaGGCTACCTCCCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LEQLGLIKTRKGNPPYWECVKQN*ATSLWA
Trigger: TGCCCACAGGGAGGTAGCCCAGTTCTGCTTCACACA...TTCCCAATAGGGTGGGTTGCCTTTCCTTGTCTTAATTAGGCCTAACTGTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp TCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAAGGAGCTGAGCCAACCTaGGGGAGAGTCCAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: SRQSHVIHTHISSAYKKEGAEPT*GRVQAP
Trigger: TGGGGCTTGGACTCTCCCCCAGGTTGGCTCAGCTCC...TTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGTGTGCTGAACAGGACTaGGGCTTCCCGAAACCATCT +
Preference number: 4 (lower is better)
Translates to: HILCLQERTVWELTLQQMCAEQD*GFPKPS
Trigger: AGATGGTTTCGGGAAGCCCCAGTCCTGTTCAGCACA...CATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGTGTGCTGAACAGGACTaGGGCTTCCCGAAACCATCT +
Preference number: 4 (lower is better)
Translates to: CLQERTVWELTLQQMRVRCAEQD*GFPKPS
Trigger: AGATGGTTTCGGGAAGCCCCAGTCCTGTTCAGCACA...CCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGGGCATTCGAGCCTCTTaGGCAGTGAAAGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: HTHILCLQERTVWELTLQGIRAS*AVKGDG
Trigger: ACCATCTCCTTTCACTGCCCAAGAGGCTCGAATGCC...CTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAACAGGGACAGAGGTTTTaGATGGGGAAAGGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: WELTLQQMRVRAKLTRAEQGQRF*MGKGSL
Trigger: CAGACTTCCTTTCCCCATCCAAAACCTCTGTCCCTG...TTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAGCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTCATGTCCATGGTGCCTTGGTaGGGGCAGACAGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CWGSSGIDSTQAKSQSFMSMVPW*GQTVPG
Trigger: CCCAGGAACTGTCTGCCCCCACCAAGGCACCATGGA...CATGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409878.8
CDS-3UTR CCA 90 bp CACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCCAATTCCACTCACCTaGGTGAGGCAGCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: HTHILCLQERTVWELTLQPIPLT*VRQPNP
Trigger: TGGATTTGGCTGCCTCACCCAGGTGAGTGGAATTGG...CTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp GTGAATGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATAGGTCAGAGTTTGGGTaGAGCCTGGGGTGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: VNAGVQVALIVHRQNLNHRSEFG*SLGWGE
Trigger: TTCTCCCCACCCCAGGCTTCACCCAAACTCTGACCT...ATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000295738.11
CDS-3UTR TCA 90 bp GTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTCATGGTCCACTGCTGGGATTGAGGGGTaGTCGGCTCATGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: VQVALIVHRQNLNHSWSTAGIEG*SAHAAL
Trigger: CAAGGCAGCATGAGCCGATCACCCCTCAATCCCAGC...AGTGGACCATGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR TCA 90 bp GTGAATGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATATCCTGGGAGCCCACTaGTCGGAGTTGGCTGGGATT +
Preference number: 4 (lower is better)
Translates to: VNAGVQVALIVHRQNLNHILGAH*SELAGI
Trigger: AATCCCAGCCAACTCCGATCAGTGGGCTCCCAGGAT...ATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR TCA 90 bp CCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGATCCTGGGAGCCCACTaGTCGGAGTTGGCTGGGATT +
Preference number: 4 (lower is better)
Translates to: PCNTHTHILCLQERTVWEILGAH*SELAGI
Trigger: AATCCCAGCCAACTCCGATCAGTGGGCTCCCAGGAT...CTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp GTCTTTTTAAACCGTAAATGCCTTGAGACGGCATGGACCCTGTCTTATCCCTGTAGAGCAGAGAAGCCATaGCCAAGACATGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VFLNRKCLETAWTLSYPCRAEKP*PRHAAE
Trigger: CTCTGCAGCATGTCTTGGTCATGGCTTCTCTGCTCT...ACAGGGATAAGACAGGGTCCATGCCGTCTCAAGGCATTTACGGTTTAAAAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR TCA 90 bp TGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGACAGGGAGAGGAGTGTaGGTTGATGACGTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: CLQERTVWELTLQQMRVRTGRGV*VDDVEA
Trigger: AGCTTCAACGTCATCAACTCACACTCCTCTCCCTGT...CCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp CTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCTGGAGAAGCCCACAATaGAGATATTTCGCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: LTLQQMRVRAKLTRAEVGWRSPQ*RYFAQS
Trigger: ACTCTGGGCGAAATATCTTCATTGTGGGCTTCTCCA...GCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp TGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTCATGTTCTCCCTGGGCTTCTaGGGCATTCGAGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: CWGSSGIDSTQAKSQSFMFSLGF*GIRASW
Trigger: CCAAGAGGCTCGAATGCCTCAGAAGCCCAGGGAGAA...CATGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR TCA 90 bp TGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGTACAAAGGTGCAGCATaGGGGAGGCCCTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: CNTHTHILCLQERTVWELYKGAA*GRPLPL
Trigger: CAAGGGCAAGGGCCTCCCTCATGCTGCACCTTTGTA...CAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455516.6
CDS-3UTR GCA 90 bp ACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATTCGCTTTGTCTTGGCTaGCCGGGACCAGAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: TYPLPTRKNSLGADSPADSLCLG*PGPELS
Trigger: ACTTAACTCTGGTCCCGGGCAGCCAAGACAAAGCGA...ATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295738.11
CDS-3UTR GCA 90 bp ACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGTGATCGGCTCATGCTaGCTTGCCTTTCGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: TYPLPTRKNSLGADSPADVIGSC*LAFRFV
Trigger: GACAAAGCGAAAGGCAAGGCAGCATGAGCCGATCAC...ATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGATGACCAAGACATGCTaGAGAGCCAGAAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: HTHILCLQERTVWELTLQMTKTC*RARRQL
Trigger: CAGCTGTCTTCTGGCTCTGCAGCATGTCTTGGTCAT...CTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp TGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGAGCCCCATCATGCCCTaGAGCAGCCCAGATACTACC +
Preference number: 4 (lower is better)
Translates to: CNTHTHILCLQERTVWELSPIMP*SSPDTT
Trigger: GGTAGTATCTGGGCTGCTGCAGGGCATGATGGGGCT...CAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp TGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAATGTGTCAGCAGTGAGTaGAGTAATACATCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: WELTLQQMRVRAKLTRAECVSSE*SNTSKG
Trigger: CCCCTTGGATGTATTACTGCACTCACTGCTGACACA...TTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAGCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp ATCTCAATCATTCATGGTCCACTAAATCATGGCCTCTGCTCTGGAACAGTTAGGGCCAGGCAGCAAGTCTaGCATCTCTTCTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: ISIIHGPLNHGLCSGTVRARQQV*HLFWLR
Trigger: TCTGAGCCAGAAGAGATGGCAGACTTGCTGCCTGGC...CCTAACTGTTCCAGAGCAGAGGCCATGATTTAGTGGACCATGAATGATTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp TGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAACTAAATCATGGCCTCTaGTCTGGAACAGTTAGGCCT +
Preference number: 4 (lower is better)
Translates to: WELTLQQMRVRAKLTRAELNHGL*SGTVRP
Trigger: AGGCCTAACTGTTCCAGAGCAGAGGCCATGATTTAG...TTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAGCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp CACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGTAGTTCCAGGACCTTaGACATGGGAGATGCTCAGT +
Preference number: 4 (lower is better)
Translates to: HTYPLPTRKNSLGADSPAVVPGP*TWEMLS
Trigger: ACTGAGCATCTCCCATGTGCAAGGTCCTGGAACTAC...TGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp GTCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGGAGGCCCTTGCCCTTaGTCTGTGCTCACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: VPCNTHTHILCLQERTVWGGPCP*SVLTVS
Trigger: GGAAACTGTGAGCACAGAGCAAGGGCAAGGGCCTCC...CCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455516.6
CDS-3UTR CCA 90 bp ATCTCAATCATTCATGGTCCACTAAATCATGGCCTCTGCTCTGGAACAGTTAGGTGTGTGAAGCAGAACTaGGCTACCTCCCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: ISIIHGPLNHGLCSGTVRCVKQN*ATSLWA
Trigger: TGCCCACAGGGAGGTAGCCCAGTTCTGCTTCACACA...CCTAACTGTTCCAGAGCAGAGGCCATGATTTAGTGGACCATGAATGATTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp AATGGAACCTCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACTGTGTGAAGCAGAACTaGGCTACCTCCCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: NGTSRQSHVIHTHISSAYCVKQN*ATSLWA
Trigger: TGCCCACAGGGAGGTAGCCCAGTTCTGCTTCACACA...GTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGAGGTTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGGCAGCCAAATCCATaGTGCCTTGGTGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SHVIHTHISSAYKKEQFGRQPNP*CLGGGR
Trigger: TCTGCCCCCACCAAGGCACCATGGATTTGGCTGCCT...CCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGTTCCCGAAACCATCTTaGCAGCAGCAAGGCCATGAA +
Preference number: 4 (lower is better)
Translates to: CLQERTVWELTLQQMRVRFPKPS*QQQGHE
Trigger: TTCATGGCCTTGCTGCTGCCAAGATGGTTTCGGGAA...CCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGTTCCCGAAACCATCTTaGCAGCAGCAAGGCCATGAA +
Preference number: 4 (lower is better)
Translates to: HTHILCLQERTVWELTLQFPKPS*QQQGHE
Trigger: TTCATGGCCTTGCTGCTGCCAAGATGGTTTCGGGAA...CTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp AATGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTCAAGGGTCTTCAGGCAGTaGGCAGAGGCAGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: NAGVQVALIVHRQNLNHSRVFRQ*AEAVER
Trigger: CCTCTCCACTGCCTCTGCCCACTGCCTGAAGACCCT...TGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp CTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCCAAGAAAGAACAGTTTaGGAGCTGACTCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LTLQQMRVRAKLTRAEVGQERTV*ELTLQQ
Trigger: CTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTG...GCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp ACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTGGCAACCCACCCTATTaGGAAATGGAACCTCTAGAC +
Preference number: 4 (lower is better)
Translates to: TLQQMRVRAKLTRAEVGVGNPPY*EMEPLD
Trigger: GTCTAGAGGTTCCATTTCCCAATAGGGTGGGTTGCC...AACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp TGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGCCACACACAGGCCACTaGGATCAGCACCGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: CNTHTHILCLQERTVWELPHTGH*DQHRKE
Trigger: CTCCTTTCGGTGCTGATCCCAGTGGCCTGTGTGTGG...CAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGCAGCCAGAGCTCTaGGCGTCAGCAAAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: PCNTHTHILCLQERTVWELQPEL*ASAKAN
Trigger: ATTGGCCTTTGCTGACGCCCAGAGCTCTGGCTGCAG...CTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp TGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGTGGAGAAGCCCACAATaGAGATATTTCGCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: CLQERTVWELTLQQMRVRWRSPQ*RYFAQS
Trigger: ACTCTGGGCGAAATATCTTCATTGTGGGCTTCTCCA...CCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp TCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGGAGCCTCTTGGGCAGTaGAAGGAGATGGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SHVIHTHISSAYKKEQFGEPLGQ*KEMVAL
Trigger: AAGGGCTACCATCTCCTTTCACTGCCCAAGAGGCTC...CCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp TGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTCATGCGGCTCATGCTGCCTTaGCTTTCGCTTTGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: CWGSSGIDSTQAKSQSFMRLMLP*LSLCLG
Trigger: GCCAAGACAAAGCGAAAGGCAAGGCAGCATGAGCCG...CATGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp ATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGACTGCCCATCCAAGTTTaGAGGATGGTAGACATACCA +
Preference number: 4 (lower is better)
Translates to: ILCLQERTVWELTLQQMRLPIQV*RMVDIP
Trigger: TGGTATGTCTACCATCCTGCAAACTTGGATGGGCAG...TCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp TCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGGGACAAGAGGCAGCCTaGTGCCCATCCAAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: SHVIHTHISSAYKKEQFGGQEAA*CPSKFA
Trigger: TGCAAACTTGGATGGGCAGCAGGCTGCCTCTTGTCC...CCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp GTCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGAGAGAAGTGTTCCAGTaGCCCAGGCCATGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: VPCNTHTHILCLQERTVWREVFQ*PRPWQL
Trigger: TAGCTGCCATGGCCTGGGGCACTGGAACACTTCTCT...CCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGAGAGAAGTGTTCCAGTaGCCCAGGCCATGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: PCNTHTHILCLQERTVWEREVFQ*PRPWQL
Trigger: TAGCTGCCATGGCCTGGGGCACTGGAACACTTCTCT...CTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp TGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGTGTGTCAGCAGTGAGTaGAGTAATACATCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: CLQERTVWELTLQQMRVRCVSSE*SNTSKG
Trigger: CCCCTTGGATGTATTACTGCACTCACTGCTGACACA...CCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCCCACTGATCGGAGTTaGCTGGGATTGAGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: PCNTHTHILCLQERTVWEPTDRS*LGLRGD
Trigger: ATCACCCCTCAATCCCAGCCAACTCCGATCAGTGGG...CTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAAAGGGTCCCAAGAGTaGGTGGAGGGATTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SHVIHTHISSAYKKEQFGKGSQE*VEGFWG
Trigger: TCCCCAGAATCCCTCCACCCACTCTTGGGACCCTTT...CCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TTAGTAATTACAAAGGTCTTTTTAAACCGTAAATGCCTTGAGACGGCATGGACCGCCCCGGACACCTCCTaGAGAGAAGTGTTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LVITKVFLNRKCLETAWTAPDTS*REVFQC
Trigger: GCACTGGAACACTTCTCTCCAGGAGGTGTCCGGGGC...GGTCCATGCCGTCTCAAGGCATTTACGGTTTAAAAAGACCTTTGTAATTACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp TGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACCAACAACAGGCAGTaGGATGGTGGTGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CNTHTHILCLQERTVWELTNNRQ*DGGEEL
Trigger: CAGCTCCTCACCACCATCCCACTGCCTGTTGTTGGT...CAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp ATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGACAGCCAGGTAGAAGCTaGAGAATCCAGCAGACAAAA +
Preference number: 4 (lower is better)
Translates to: ILCLQERTVWELTLQQMRQPGRS*RIQQTK
Trigger: TTTTGTCTGCTGGATTCTCCAGCTTCTACCTGGCTG...TCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp CACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCACAGCCAGGTAGAAGCTaGAGAATCCAGCAGACAAAA +
Preference number: 4 (lower is better)
Translates to: HTYPLPTRKNSLGADSPAQPGRS*RIQQTK
Trigger: TTTTGTCTGCTGGATTCTCCAGCTTCTACCTGGCTG...TGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp ACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCTTCCCGAAACCATCTTaGCAGCAGCAAGGCCATGAA +
Preference number: 4 (lower is better)
Translates to: THTHILCLQERTVWELTLFPKPS*QQQGHE
Trigger: TTCATGGCCTTGCTGCTGCCAAGATGGTTTCGGGAA...GAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGCAAGAAAGAACAGTTTaGGAGCTGACTCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CLQERTVWELTLQQMRVRQERTV*ELTLQQ
Trigger: CTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTG...CCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp GTCTTTTTAAACCGTAAATGCCTTGAGACGGCATGGACCCTGTCTTATCCCTGTGGCAACCCACCCTATTaGGAAATGGAACCTCTAGAC +
Preference number: 4 (lower is better)
Translates to: VFLNRKCLETAWTLSYPCGNPPY*EMEPLD
Trigger: GTCTAGAGGTTCCATTTCCCAATAGGGTGGGTTGCC...ACAGGGATAAGACAGGGTCCATGCCGTCTCAAGGCATTTACGGTTTAAAAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp CTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTTGGTCCACTAAATCATaGCCTCTGCTCTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: LCLQERTVWELTLQQMRVWSTKS*PLLWNS
Trigger: ACTGTTCCAGAGCAGAGGCCATGATTTAGTGGACCA...AACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR TCA 90 bp GTGAATGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTACAAAGGTGCAGCATaGGGGAGGAGTTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: VNAGVQVALIVHRQNLNHYKGAA*GRSFQV
Trigger: CACCTGGAAACTCCTCCCTCATGCTGCACCTTTGTA...ATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR TCA 90 bp TACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTACAGGGAGAGGAGTGTaGGTTGATGACGTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: YTHTYPLPTRKNSLGADSTGRGV*VDDVEA
Trigger: AGCTTCAACGTCATCAACTCACACTCCTCTCCCTGT...AGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp TTAGTAATTACAAAGGTCTTTTTAAACCGTAAATGCCTTGAGACGGCATGGACCGGAAGTCTGTACACTTaGGCAGCCTTCTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LVITKVFLNRKCLETAWTGSLYT*AAFSLG
Trigger: GCCCAGGGAGAAGGCTGCTCAAGTGTACAGACTTCC...GGTCCATGCCGTCTCAAGGCATTTACGGTTTAAAAAGACCTTTGTAATTACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp GTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTCATGGTCCACTCGGCTCATGCTGCCTTaGCTTTCGCTTTGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: VQVALIVHRQNLNHSWSTRLMLP*LSLCLG
Trigger: GCCAAGACAAAGCGAAAGGCAAGGCAGCATGAGCCG...AGTGGACCATGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp TGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGGCCATGACCAAGACATaGTGCAGAGCCAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: CNTHTHILCLQERTVWELAMTKT*CRARRQ
Trigger: CTGTCTTCTGGCTCTGCAGCATGTCTTGGTCATGGC...CAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp GTCTTTTTAAACCGTAAATGCCTTGAGACGGCATGGACCCTGTCTTATCCCTGTTGTGTCAGCAGTGAGTaGAGTAATACATCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: VFLNRKCLETAWTLSYPCCVSSE*SNTSKG
Trigger: CCCCTTGGATGTATTACTGCACTCACTGCTGACACA...ACAGGGATAAGACAGGGTCCATGCCGTCTCAAGGCATTTACGGTTTAAAAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp AATGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTCAAAAGGGTCCCAAGAGTaGGTGGAGGGATTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: NAGVQVALIVHRQNLNHSKGSQE*VEGFWG
Trigger: TCCCCAGAATCCCTCCACCCACTCTTGGGACCCTTT...TGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp AATGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTCAACCAACAACAGGCAGTaGGATGGTGGTGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: NAGVQVALIVHRQNLNHSTNNRQ*DGGEEL
Trigger: CAGCTCCTCACCACCATCCCACTGCCTGTTGTTGGT...TGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp TGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGTGTGCTGAACAGGACTaGGGCTTCCCGAAACCATCT +
Preference number: 4 (lower is better)
Translates to: CNTHTHILCLQERTVWELCAEQD*GFPKPS
Trigger: AGATGGTTTCGGGAAGCCCCAGTCCTGTTCAGCACA...CAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp GTGAATGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATGGCATTCGAGCCTCTTaGGCAGTGAAAGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: VNAGVQVALIVHRQNLNHGIRAS*AVKGDG
Trigger: ACCATCTCCTTTCACTGCCCAAGAGGCTCGAATGCC...ATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp AATGGAACCTCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACCAGGGACAGAGGTTTTaGATGGGGAAAGGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: NGTSRQSHVIHTHISSAYQGQRF*MGKGSL
Trigger: CAGACTTCCTTTCCCCATCCAAAACCTCTGTCCCTG...GTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGAGGTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp ACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCACGTTCTGGTCATTTCTaGGACCTAAACCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: THTYPLPTRKNSLGADSPRSGHF*DLNPSL
Trigger: CAGAGAAGGGTTTAGGTCCCAGAAATGACCAGAACG...TGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CCA 90 bp TGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTCATGAAATCCATGGTGCCTTaGTGGGGGCAGACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: CWGSSGIDSTQAKSQSFMKSMVP*WGQTVP
Trigger: AGGAACTGTCTGCCCCCACCAAGGCACCATGGATTT...CATGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409878.8
CDS-3UTR CCA 90 bp TTAGTAATTACAAAGGTCTTTTTAAACCGTAAATGCCTTGAGACGGCATGGACCCCACTTTGCCCACGTTaGGGAAGCTGGATGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LVITKVFLNRKCLETAWTPLCPR*GSWMQC
Trigger: GCACTGCATCCAGCTTCCCCAACGTGGGCAAAGTGG...GGTCCATGCCGTCTCAAGGCATTTACGGTTTAAAAAGACCTTTGTAATTACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409878.8
CDS-3UTR TCA 90 bp TCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAAAGAGCAGAGAAGCCATaGCCAAGACATGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SRQSHVIHTHISSAYKKERAEKP*PRHAAE
Trigger: CTCTGCAGCATGTCTTGGTCATGGCTTCTCTGCTCT...TTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR TCA 90 bp TCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAATACAAAGGTGCAGCATaGGGGAGGAGTTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SRQSHVIHTHISSAYKKEYKGAA*GRSFQV
Trigger: CACCTGGAAACTCCTCCCTCATGCTGCACCTTTGTA...TTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR TCA 90 bp GCATTTTCGTTAGTAATTACAAAGGTCTTTTTAAACCGTAAATGCCTTGAGACGATGGTGGTGAGGAGCTaGGCCAACCTGGGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: AFSLVITKVFLNRKCLETMVVRS*ANLGES
Trigger: ACTCTCCCCCAGGTTGGCTCAGCTCCTCACCACCAT...CGTCTCAAGGCATTTACGGTTTAAAAAGACCTTTGTAATTACTAACGAAAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp AATGGAACCTCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACCTAAATCATGGCCTCTaGTCTGGAACAGTTAGGCCT +
Preference number: 4 (lower is better)
Translates to: NGTSRQSHVIHTHISSAYLNHGL*SGTVRP
Trigger: AGGCCTAACTGTTCCAGAGCAGAGGCCATGATTTAG...GTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGAGGTTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp GTGAATGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATGTAGTTCCAGGACCTTaGACATGGGAGATGCTCAGT +
Preference number: 4 (lower is better)
Translates to: VNAGVQVALIVHRQNLNHVVPGP*TWEMLS
Trigger: ACTGAGCATCTCCCATGTGCAAGGTCCTGGAACTAC...ATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCATTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp GCATTTTCGTTAGTAATTACAAAGGTCTTTTTAAACCGTAAATGCCTTGAGACGTTCCAGGTGTCTGGATaGCCCGGGGTAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: AFSLVITKVFLNRKCLETFQVSG*PGVASG
Trigger: GCCAGAAGCTACCCCGGGCCATCCAGACACCTGGAA...CGTCTCAAGGCATTTACGGTTTAAAAAGACCTTTGTAATTACTAACGAAAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp GTACACAGGCAAAATCTCAATCATTCATGGTCCACTAAATCATGGCCTCTGCTCCAAGAAAGAACAGTTTaGGAGCTGACTCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VHRQNLNHSWSTKSWPLLQERTV*ELTLQQ
Trigger: CTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTG...GAGCAGAGGCCATGATTTAGTGGACCATGAATGATTGAGATTTTGCCTGTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR TCA 90 bp GTGAATGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTGGAGAAGCCCACAATaGAGATATTTCGCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: VNAGVQVALIVHRQNLNHWRSPQ*RYFAQS
Trigger: ACTCTGGGCGAAATATCTTCATTGTGGGCTTCTCCA...ATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCATTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp CCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGCCCATCCAAGTTTaGAGGATGGTAGACATACCA +
Preference number: 4 (lower is better)
Translates to: PCNTHTHILCLQERTVWELPIQV*RMVDIP
Trigger: TGGTATGTCTACCATCCTGCAAACTTGGATGGGCAG...CTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp TGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGCTGCCCATCCAAGTTTaGAGGATGGTAGACATACCA +
Preference number: 4 (lower is better)
Translates to: CNTHTHILCLQERTVWELLPIQV*RMVDIP
Trigger: TGGTATGTCTACCATCCTGCAAACTTGGATGGGCAG...CAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp TTAGTAATTACAAAGGTCTTTTTAAACCGTAAATGCCTTGAGACGGCATGGACCGGTCCCCTACAAAGGTaGAGCATGAGGGAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: LVITKVFLNRKCLETAWTGPLQR*SMREEF
Trigger: AAACTCCTCCCTCATGCTGCACCTTTGTAGGGGACC...GGTCCATGCCGTCTCAAGGCATTTACGGTTTAAAAAGACCTTTGTAATTACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp TTAGTAATTACAAAGGTCTTTTTAAACCGTAAATGCCTTGAGACGGCATGGACCGGCATTCGAGCCTCTTaGGCAGTGAAAGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: LVITKVFLNRKCLETAWTGIRAS*AVKGDG
Trigger: ACCATCTCCTTTCACTGCCCAAGAGGCTCGAATGCC...GGTCCATGCCGTCTCAAGGCATTTACGGTTTAAAAAGACCTTTGTAATTACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp ATAGTACACAGGCAAAATCTCAATCATTCATGGTCCACTAAATCATGGCCTCTGCAGGGACAGAGGTTTTaGATGGGGAAAGGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: IVHRQNLNHSWSTKSWPLQGQRF*MGKGSL
Trigger: CAGACTTCCTTTCCCCATCCAAAACCTCTGTCCCTG...CAGAGGCCATGATTTAGTGGACCATGAATGATTGAGATTTTGCCTGTGTACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp GTGAATGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATCGTTCTGGTCATTTCTaGGACCTAAACCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: VNAGVQVALIVHRQNLNHRSGHF*DLNPSL
Trigger: CAGAGAAGGGTTTAGGTCCCAGAAATGACCAGAACG...ATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCATTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp TGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTCATGCGTTCTGGTCATTTCTaGGACCTAAACCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: CWGSSGIDSTQAKSQSFMRSGHF*DLNPSL
Trigger: CAGAGAAGGGTTTAGGTCCCAGAAATGACCAGAACG...CATGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp GTGAATGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTGGTCCACTAAATCATaGCCTCTGCTCTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: VNAGVQVALIVHRQNLNHWSTKS*PLLWNS
Trigger: ACTGTTCCAGAGCAGAGGCCATGATTTAGTGGACCA...ATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCATTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp CTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTCTGAATCTCAATCATTCATaGTCCACTAAATCATGGCCT +
Preference number: 4 (lower is better)
Translates to: LQQMRVRAKLTRAEVGVLNLNHS*STKSWP
Trigger: AGGCCATGATTTAGTGGACCATGAATGATTGAGATT...CAGAACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp CTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTCTGGACTGCTTTCTGCTTTaGATTTTCGTTAGTAATTAC +
Preference number: 4 (lower is better)
Translates to: LQQMRVRAKLTRAEVGVLDCFLL*IFVSNY
Trigger: GTAATTACTAACGAAAATGCAAAGCAGAAAGCAGTC...CAGAACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp GCATTTTCGTTAGTAATTACAAAGGTCTTTTTAAACCGTAAATGCCTTGAGACGACCAACAACAGGCAGTaGGATGGTGGTGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AFSLVITKVFLNRKCLETTNNRQ*DGGEEL
Trigger: CAGCTCCTCACCACCATCCCACTGCCTGTTGTTGGT...CGTCTCAAGGCATTTACGGTTTAAAAAGACCTTTGTAATTACTAACGAAAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp TCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGCCAGGTAGAAGCTaGAGAATCCAGCAGACAAAA +
Preference number: 4 (lower is better)
Translates to: SRQSHVIHTHISSAYKKEQPGRS*RIQQTK
Trigger: TTTTGTCTGCTGGATTCTCCAGCTTCTACCTGGCTG...TTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR GCA 90 bp CTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTTTACAGACTGCTTTCTaGTTTGCATTTTCGTTAGTA +
Preference number: 4 (lower is better)
Translates to: LCLQERTVWELTLQQMRVLQTAF*FAFSLV
Trigger: TACTAACGAAAATGCAAAGCAGAAAGCAGTCTGTAA...AACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp ATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGATTACAGACTGCTTTCTaGTTTGCATTTTCGTTAGTA +
Preference number: 4 (lower is better)
Translates to: ILCLQERTVWELTLQQMRLQTAF*FAFSLV
Trigger: TACTAACGAAAATGCAAAGCAGAAAGCAGTCTGTAA...TCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp GCATTTTCGTTAGTAATTACAAAGGTCTTTTTAAACCGTAAATGCCTTGAGACGATGACCAAGACATGCTaGAGAGCCAGAAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: AFSLVITKVFLNRKCLETMTKTC*RARRQL
Trigger: CAGCTGTCTTCTGGCTCTGCAGCATGTCTTGGTCAT...CGTCTCAAGGCATTTACGGTTTAAAAAGACCTTTGTAATTACTAACGAAAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR GCA 90 bp CCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGGACTGCTTTCTGCTTTaGATTTTCGTTAGTAATTAC +
Preference number: 4 (lower is better)
Translates to: PCNTHTHILCLQERTVWEDCFLL*IFVSNY
Trigger: GTAATTACTAACGAAAATGCAAAGCAGAAAGCAGTC...CTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
3UTR CAA 72 bp GTAAGTATTAAAGTGAATGCTGGGGTTCAAGTGGCATaGATAGTACACAGGCAAAATCTCAATCATTCATGG +
Preference number: 4 (lower is better)
Translates to: VSIKVNAGVQVA*IVHRQNLNHSW
Trigger: CCATGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCATTCACTTTAATACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CCA 90 bp TTAGTAATTACAAAGGTCTTTTTAAACCGTAAATGCCTTGAGACGGCATGGACCAATCTCAATCATTCATaGTCCACTAAATCATGGCCT +
Preference number: 4 (lower is better)
Translates to: LVITKVFLNRKCLETAWTNLNHS*STKSWP
Trigger: AGGCCATGATTTAGTGGACCATGAATGATTGAGATT...GGTCCATGCCGTCTCAAGGCATTTACGGTTTAAAAAGACCTTTGTAATTACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS GCA 90 bp CAGCCGGCCACACAGGGCATAGCAGCCCAGGGAACTGGTGGAGGCTaGCAAGGCCATGGAGATGCCTGCAGCCAGAGCTCTGGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: QPATQGIAAQGTGGG*QGHGDACSQSSGRQ
Trigger: CTGACGCCCAGAGCTCTGGCTGCAGGCATCTCCATGGCCTTGGCAGCCTCCACCAGTTCCCTGGGCTGCTATGCCCTGTGTGGCCGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409878.8
ENST00000455516.6
ENST00000497918.5
CDS CCA 90 bp GGCAGAGATCCACACAAAGGGTCCCAAGAGTGGGTGGAGGGATTCTaGGGAGCAGGTGGAGGCAAGGGGGCCAGGGCATCCTGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: GRDPHKGSQEWVEGF*GAGGGKGARASWEP
Trigger: GGGCTCCCAGGATGCCCTGGCCCCCTTGCCTCCACCTGCTCCCCAGAATCCCTCCACCCACTCTTGGGACCCTTTGTGTGGATCTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000295738.11
ENST00000409370.6
ENST00000409878.8
ENST00000421779.2
ENST00000430764.2
ENST00000455516.6
ENST00000461812.1
ENST00000497918.5
CDS GCA 90 bp TCCAGCCTGGATAAGACCCACTTTGCCCACGTTGGGGAAGCTGGATaGAGTGCCCATGGGGCTTCCCAGCAGCCCGGCCAGCACACTGCC +
Preference number: 5 (lower is better)
Translates to: SSLDKTHFAHVGEAG*SAHGASQQPGQHTA
Trigger: GGCAGTGTGCTGGCCGGGCTGCTGGGAAGCCCCATGGGCACTGCATCCAGCTTCCCCAACGTGGGCAAAGTGGGTCTTATCCAGGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS CCA 90 bp GGAGGCAAGGGGGCCAGGGCATCCTGGGAGCCCACTGATCGGAGTTaGCTGGGATTGAGGGGTGATCGGCTCATGCTGCCTTGCCTTTCG +
Preference number: 5 (lower is better)
Translates to: GGKGARASWEPTDRS*LGLRGDRLMLPCLS
Trigger: CGAAAGGCAAGGCAGCATGAGCCGATCACCCCTCAATCCCAGCCAACTCCGATCAGTGGGCTCCCAGGATGCCCTGGCCCCCTTGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000421779.2
ENST00000430764.2
ENST00000455516.6
ENST00000461812.1
ENST00000497918.5
CDS CCA 90 bp GGAGCCCAGGTGAGCAAGGCCAACCCCCAGTGTGTGAAGCAGAACTaGGCTACCTCCCTGTGGGCAGAGAGCCCTGCCACAACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GAQVSKANPQCVKQN*ATSLWAESPATTRL
Trigger: CAGCCTGGTTGTGGCAGGGCTCTCTGCCCACAGGGAGGTAGCCCAGTTCTGCTTCACACACTGGGGGTTGGCCTTGCTCACCTGGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295738.11
CDS CCA 90 bp AATGCAGCAGCCGGCCACACAGGGCATAGCAGCCCAGGGAACTGGTaGAGGCTGCCAAGGCCATGGAGATGCCTGCAGCCAGAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: NAAAGHTGHSSPGNW*RLPRPWRCLQPELW
Trigger: CCAGAGCTCTGGCTGCAGGCATCTCCATGGCCTTGGCAGCCTCCACCAGTTCCCTGGGCTGCTATGCCCTGTGTGGCCGGCTGCTGCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409878.8
ENST00000455516.6
ENST00000497918.5
CDS CCA 90 bp GCAAATGCAGCAGCCGGCCACACAGGGCATAGCAGCCCAGGGAACTaGTGGAGGCTGCCAAGGCCATGGAGATGCCTGCAGCCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: ANAAAGHTGHSSPGN*WRLPRPWRCLQPEL
Trigger: GAGCTCTGGCTGCAGGCATCTCCATGGCCTTGGCAGCCTCCACCAGTTCCCTGGGCTGCTATGCCCTGTGTGGCCGGCTGCTGCATTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409878.8
ENST00000455516.6
ENST00000497918.5
CDS GCA 90 bp ACGTACCTGGATAAGACCCACTTTGCCCACGTTGGGGAAGCTGGATaGAGTGCCCATGGGGCTTCCCAGCAGCCCGGCCAGCACACTGCC +
Preference number: 5 (lower is better)
Translates to: TYLDKTHFAHVGEAG*SAHGASQQPGQHTA
Trigger: GGCAGTGTGCTGGCCGGGCTGCTGGGAAGCCCCATGGGCACTGCATCCAGCTTCCCCAACGTGGGCAAAGTGGGTCTTATCCAGGTACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497918.5
CDS CCA 90 bp TGGTGGAGGCTGCCAAGGCCATGGAGATGCCTGCAGCCAGAGCTCTaGGCGTCAGCAAAGGCCAATTCCACTCACCTGGGTGAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: WWRLPRPWRCLQPEL*ASAKANSTHLGEAA
Trigger: GGCTGCCTCACCCAGGTGAGTGGAATTGGCCTTTGCTGACGCCCAGAGCTCTGGCTGCAGGCATCTCCATGGCCTTGGCAGCCTCCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409878.8
ENST00000455516.6
ENST00000497918.5
CDS CCA 90 bp AGGGAGGCCCTTGCCCTTGCTCTGTGCTCACAGTTTCCAGGTGTCTaGATGGCCCGGGGTAGCTTCTGGCTGGTCAGCACCAGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: REALALALCSQFPGV*MARGSFWLVSTRAG
Trigger: CCCTGCTCTGGTGCTGACCAGCCAGAAGCTACCCCGGGCCATCCAGACACCTGGAAACTGTGAGCACAGAGCAAGGGCAAGGGCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455516.6
CDS CCA 90 bp GAGGCAGCCTGTAGGAACAGCAGCCCCAGCAGGTCTGGGACTATGTaGCAGCCAGCAAGGCTCCCCCAAACCTCTCCTACCCTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: EAACRNSSPSRSGTM*QPARLPQTSPTLQD
Trigger: GTCCTGGAGGGTAGGAGAGGTTTGGGGGAGCCTTGCTGGCTGCCACATAGTCCCAGACCTGCTGGGGCTGCTGTTCCTACAGGCTGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461812.1
CDS TCA 90 bp CACGCCTCTCAGGACTCACGTACAGCAAGGCCAACCCCCAGTGTGTaGAGCAGAACTGGGCTACCTCCCTGTGGGCAGAGAGCCCTGCCA +
Preference number: 5 (lower is better)
Translates to: HASQDSRTARPTPSV*SRTGLPPCGQRALP
Trigger: TGGCAGGGCTCTCTGCCCACAGGGAGGTAGCCCAGTTCTGCTTCACACACTGGGGGTTGGCCTTGCTGTACGTGAGTCCTGAGAGGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497918.5
CDS CCA 90 bp ACAGGGCATAGCAGCCCAGGGAACTGGTGGAGGCTGCCAAGGCCATaGAGATGCCTGCAGCCAGAGCTCTGGGCGTCAGCAAAGGCCAAT +
Preference number: 5 (lower is better)
Translates to: TGHSSPGNWWRLPRP*RCLQPELWASAKAN
Trigger: ATTGGCCTTTGCTGACGCCCAGAGCTCTGGCTGCAGGCATCTCCATGGCCTTGGCAGCCTCCACCAGTTCCCTGGGCTGCTATGCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409878.8
ENST00000455516.6
ENST00000497918.5
CDS CCA 90 bp GGACTCACGTACAGCAAGGCCAACCCCCAGTGTGTGAAGCAGAACTaGGCTACCTCCCTGTGGGCAGAGAGCCCTGCCACAACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GLTYSKANPQCVKQN*ATSLWAESPATTRL
Trigger: CAGCCTGGTTGTGGCAGGGCTCTCTGCCCACAGGGAGGTAGCCCAGTTCTGCTTCACACACTGGGGGTTGGCCTTGCTGTACGTGAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465580.3
ENST00000497918.5
CDS TCA 90 bp GGGCCAGGGCATCCTGGGAGCCCACTGATCGGAGTTGGCTGGGATTaGGGGGTGATCGGCTCATGCTGCCTTGCCTTTCGCTTTGTCTTG +
Preference number: 5 (lower is better)
Translates to: GPGHPGSPLIGVGWD*GVIGSCCLAFRFVL
Trigger: CAAGACAAAGCGAAAGGCAAGGCAGCATGAGCCGATCACCCCTCAATCCCAGCCAACTCCGATCAGTGGGCTCCCAGGATGCCCTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000421779.2
ENST00000455516.6
ENST00000461812.1
ENST00000497918.5
CDS CCA 90 bp AGCAGGATAACCAGCAAGGCCAACCCCCAGTGTGTGAAGCAGAACTaGGCTACCTCCCTGTGGGCAGAGAGCCCTGCCACAACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SRITSKANPQCVKQN*ATSLWAESPATTRL
Trigger: CAGCCTGGTTGTGGCAGGGCTCTCTGCCCACAGGGAGGTAGCCCAGTTCTGCTTCACACACTGGGGGTTGGCCTTGCTGGTTATCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409370.6
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp CAAGGCCAACCCCCAGTGTGTGAAGCAGAACTGGGCTACCTCCCTGTGGGCAGATGTGAGTTGATGACGTaGAAGCTCGCCTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: QGQPPVCEAELGYLPVGRCELMT*KLASRG
Trigger: GCCCCTGGAGGCGAGCTTCAACGTCATCAACTCACA...TCTGCCCACAGGGAGGTAGCCCAGTTCTGCTTCACACACTGGGGGTTGGCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS TCA 90 bp CTGGGACCTAAACCCTTCTCTGCTAGATTCAGGGCATGGCTCCCCTaGGCCAGGCAGCAAGTCTGCCATCTCTTCTGGCTCAGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: LGPKPFSARFRAWLP*ARQQVCHLFWLRGA
Trigger: GGCTCCTCTGAGCCAGAAGAGATGGCAGACTTGCTGCCTGGCTCAGGGGAGCCATGCCCTGAATCTAGCAGAGAAGGGTTTAGGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS CCA 90 bp CCTCTAGCTCCATCCTACCCCACTCCCATCCCAGGTCCACGTACCTaGATAAGACCCACTTTGCCCACGTTGGGGAAGCTGGATGCAGTG +
Preference number: 5 (lower is better)
Translates to: PLAPSYPTPIPGPRT*IRPTLPTLGKLDAV
Trigger: CACTGCATCCAGCTTCCCCAACGTGGGCAAAGTGGGTCTTATCCAGGTACGTGGACCTGGGATGGGAGTGGGGTAGGATGGAGCTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497918.5
CDS-3UTR CAA 90 bp CAAGGCCAACCCCCAGTGTGTGAAGCAGAACTGGGCTACCTCCCTGTGGGCAGAGGAGAGGAGTGTGAGTaGATGACGTTGAAGCTCGCC +
Preference number: 5 (lower is better)
Translates to: QGQPPVCEAELGYLPVGRGEECE*MTLKLA
Trigger: GGCGAGCTTCAACGTCATCAACTCACACTCCTCTCC...TCTGCCCACAGGGAGGTAGCCCAGTTCTGCTTCACACACTGGGGGTTGGCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS-3UTR CAA 90 bp CCCAGGCCATGGCAGCTAGGTCCCCTACAAAGGTGCAGCATGAGGGAGGAGTTTCAAATCCATGGTGCCTaGGTGGGGGCAGACAGTTCC +
Preference number: 5 (lower is better)
Translates to: PRPWQLGPLQRCSMREEFQIHGA*VGADSS
Trigger: GGAACTGTCTGCCCCCACCAAGGCACCATGGATTTG...AAACTCCTCCCTCATGCTGCACCTTTGTAGGGGACCTAGCTGCCATGGCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414999.5
CDS GCA 90 bp GATCGGAGTTGGCTGGGATTGAGGGGTGATCGGCTCATGCTGCCTTaGCTTTCGCTTTGTCTTGGCTGCCCGGGACCAGAGTTAAGTAGA +
Preference number: 5 (lower is better)
Translates to: DRSWLGLRGDRLMLP*LSLCLGCPGPELSR
Trigger: TCTACTTAACTCTGGTCCCGGGCAGCCAAGACAAAGCGAAAGGCAAGGCAGCATGAGCCGATCACCCCTCAATCCCAGCCAACTCCGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000497918.5
CDS CCA 90 bp ATGAGGGAGGAGTTTCCAGGTGTCTGGATGGCCCGGGGTAGCTTCTaGCTGGTCAGCACCAGAGCAGGGATAAGGAACTCTAAGGATGGA +
Preference number: 5 (lower is better)
Translates to: MREEFPGVWMARGSF*LVSTRAGIRNSKDG
Trigger: TCCATCCTTAGAGTTCCTTATCCCTGCTCTGGTGCTGACCAGCCAGAAGCTACCCCGGGCCATCCAGACACCTGGAAACTCCTCCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295738.11
ENST00000409370.6
ENST00000409878.8
ENST00000414999.5
ENST00000421779.2
ENST00000465580.3
ENST00000497918.5
CDS CCA 90 bp CTGTGCTCACAGTTTCCAGGTGTCTGGATGGCCCGGGGTAGCTTCTaGCTGGTCAGCACCAGAGCAGGGATAAGGAACTCTAAGGATGGA +
Preference number: 5 (lower is better)
Translates to: LCSQFPGVWMARGSF*LVSTRAGIRNSKDG
Trigger: TCCATCCTTAGAGTTCCTTATCCCTGCTCTGGTGCTGACCAGCCAGAAGCTACCCCGGGCCATCCAGACACCTGGAAACTGTGAGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455516.6
CDS GCA 90 bp AAGCCTGAGAGTCCAGCCAGGAAGATGGGCTGTGTCAGCAGTGAGTaGAGTAATACATCCAAGGGGCTCCAGCCTGTGCTGAACAGGACT +
Preference number: 5 (lower is better)
Translates to: KPESPARKMGCVSSE*SNTSKGLQPVLNRT
Trigger: AGTCCTGTTCAGCACAGGCTGGAGCCCCTTGGATGTATTACTGCACTCACTGCTGACACAGCCCATCTTCCTGGCTGGACTCTCAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS CCA 90 bp GCTCCAGCCTGTGCTGAACAGGACTGGGGCTTCCCGAAACCATCTTaGCAGCAGCAAGGCCATGAAGATGGAGAAGCCCACAATGAAGAT +
Preference number: 5 (lower is better)
Translates to: APACAEQDWGFPKPS*QQQGHEDGEAHNED
Trigger: ATCTTCATTGTGGGCTTCTCCATCTTCATGGCCTTGCTGCTGCCAAGATGGTTTCGGGAAGCCCCAGTCCTGTTCAGCACAGGCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp CTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTCTGGCCTTTCGCTTTGTCTaGGCTGCCCGGGACCAGAGT +
Preference number: 5 (lower is better)
Translates to: LQQMRVRAKLTRAEVGVLAFRFV*AARDQS
Trigger: ACTCTGGTCCCGGGCAGCCAAGACAAAGCGAAAGGC...CAGAACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp CATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGGCCTTGCCTTTCGCTTaGTCTTGGCTGCCCGGGACC +
Preference number: 5 (lower is better)
Translates to: HILCLQERTVWELTLQQMALPFA*SWLPGT
Trigger: GGTCCCGGGCAGCCAAGACAAAGCGAAAGGCAAGGC...CATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp ATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGCCTTGCCTTTCGCTTaGTCTTGGCTGCCCGGGACC +
Preference number: 5 (lower is better)
Translates to: ILCLQERTVWELTLQQMRALPFA*SWLPGT
Trigger: GGTCCCGGGCAGCCAAGACAAAGCGAAAGGCAAGGC...TCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp CTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGTTCTGGGGAGGCCCTTGCCCTaGCTCTGTGCTCACAGTTTC +
Preference number: 5 (lower is better)
Translates to: LQQMRVRAKLTRAEVGVLGRPLP*LCAHSF
Trigger: GAAACTGTGAGCACAGAGCAAGGGCAAGGGCCTCCC...CAGAACGCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455516.6
CDS GCA 90 bp AGGGGTGATCGGCTCATGCTGCCTTGCCTTTCGCTTTGTCTTGGCTaGCCGGGACCAGAGTTAAGTAGAGAGAGTAAGAGGTCAGAGTTT +
Preference number: 5 (lower is better)
Translates to: RGDRLMLPCLSLCLG*PGPELSRESKRSEF
Trigger: AAACTCTGACCTCTTACTCTCTCTACTTAACTCTGGTCCCGGGCAGCCAAGACAAAGCGAAAGGCAAGGCAGCATGAGCCGATCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000497918.5
CDS CCA 90 bp GAATCGTGTTCTCTAGTAGGAAGCCTGAGAGTCCAGCCAGGAAGATaGGCTGTGTCAGCAGTGAGTGCAGTAATACATCCAAGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: ESCSLVGSLRVQPGR*AVSAVSAVIHPRGS
Trigger: GGAGCCCCTTGGATGTATTACTGCACTCACTGCTGACACAGCCCATCTTCCTGGCTGGACTCTCAGGCTTCCTACTAGAGAACACGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp CATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGCGGAGTTGGCTGGGATaGAGGGGTGATCGGCTCATG +
Preference number: 5 (lower is better)
Translates to: HILCLQERTVWELTLQQMRSWLG*RGDRLM
Trigger: CATGAGCCGATCACCCCTCAATCCCAGCCAACTCCG...CATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp CTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCCAAATCCATGGTGCCTaGGTGGGGGCAGACAGTTCC +
Preference number: 5 (lower is better)
Translates to: LTLQQMRVRAKLTRAEVGQIHGA*VGADSS
Trigger: GGAACTGTCTGCCCCCACCAAGGCACCATGGATTTG...GCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp CTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTTGTGAGTTGATGACGTaGAAGCTCGCCTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LCLQERTVWELTLQQMRVCELMT*KLASRG
Trigger: GCCCCTGGAGGCGAGCTTCAACGTCATCAACTCACA...AACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp CACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCATGTGAGTTGATGACGTaGAAGCTCGCCTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: HTYPLPTRKNSLGADSPACELMT*KLASRG
Trigger: GCCCCTGGAGGCGAGCTTCAACGTCATCAACTCACA...TGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp CTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTCAAATCCATGGTGCCTaGGTGGGGGCAGACAGTTCC +
Preference number: 5 (lower is better)
Translates to: LCLQERTVWELTLQQMRVQIHGA*VGADSS
Trigger: GGAACTGTCTGCCCCCACCAAGGCACCATGGATTTG...AACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp TGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAAGGCATTCGAGCCTCTaGGGCAGTGAAAGGAGATGG +
Preference number: 5 (lower is better)
Translates to: WELTLQQMRVRAKLTRAERHSSL*GSERRW
Trigger: CCATCTCCTTTCACTGCCCAAGAGGCTCGAATGCCT...TTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAGCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp TGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAAGGAAGTCTGTACACTaGAGCAGCCTTCTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: WELTLQQMRVRAKLTRAERKSVH*SSLLPG
Trigger: CCCAGGGAGAAGGCTGCTCAAGTGTACAGACTTCCT...TTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAGCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp ACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCACCCACTTTGCCCACGTaGGGGAAGCTGGATGCAGTG +
Preference number: 5 (lower is better)
Translates to: THTYPLPTRKNSLGADSPPTLPT*GKLDAV
Trigger: CACTGCATCCAGCTTCCCCAACGTGGGCAAAGTGGG...TGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp AATGGAACCTCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACCGGAGTTGGCTGGGATaGAGGGGTGATCGGCTCATG +
Preference number: 5 (lower is better)
Translates to: NGTSRQSHVIHTHISSAYRSWLG*RGDRLM
Trigger: CATGAGCCGATCACCCCTCAATCCCAGCCAACTCCG...GTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGAGGTTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp CTGACTCTCCAGCAGATGAGAGTTAGGGCTAAATTAACCAGGGCAGAAGTAGGCGCTGCCCATCCAAGTTaGCAGGATGGTAGACATACC +
Preference number: 5 (lower is better)
Translates to: LTLQQMRVRAKLTRAEVGAAHPS*QDGRHT
Trigger: GGTATGTCTACCATCCTGCAAACTTGGATGGGCAGC...GCCTACTTCTGCCCTGGTTAATTTAGCCCTAACTCTCATCTGCTGGAGAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp TGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGGGAGAGGAGTGTGAGTaGATGACGTTGAAGCTCGCC +
Preference number: 5 (lower is better)
Translates to: CLQERTVWELTLQQMRVRGEECE*MTLKLA
Trigger: GGCGAGCTTCAACGTCATCAACTCACACTCCTCTCC...CCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp ATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGGAGAGGAGTGTGAGTaGATGACGTTGAAGCTCGCC +
Preference number: 5 (lower is better)
Translates to: ILCLQERTVWELTLQQMRGEECE*MTLKLA
Trigger: GGCGAGCTTCAACGTCATCAACTCACACTCCTCTCC...TCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp AATGGAACCTCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACCCCACTTTGCCCACGTaGGGGAAGCTGGATGCAGTG +
Preference number: 5 (lower is better)
Translates to: NGTSRQSHVIHTHISSAYPTLPT*GKLDAV
Trigger: CACTGCATCCAGCTTCCCCAACGTGGGCAAAGTGGG...GTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGAGGTTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp CCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGGCCTTTCGCTTTGTCTaGGCTGCCCGGGACCAGAGT +
Preference number: 5 (lower is better)
Translates to: PCNTHTHILCLQERTVWEAFRFV*AARDQS
Trigger: ACTCTGGTCCCGGGCAGCCAAGACAAAGCGAAAGGC...CTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp TCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAAGCCTTGCCTTTCGCTTaGTCTTGGCTGCCCGGGACC +
Preference number: 5 (lower is better)
Translates to: SRQSHVIHTHISSAYKKEALPFA*SWLPGT
Trigger: GGTCCCGGGCAGCCAAGACAAAGCGAAAGGCAAGGC...TTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp ACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCAGGAAGTCTGTACACTaGAGCAGCCTTCTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: THTHILCLQERTVWELTLRKSVH*SSLLPG
Trigger: CCCAGGGAGAAGGCTGCTCAAGTGTACAGACTTCCT...GAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp TGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCCAGCAGATGAGAGTTAGGTGTAGTTCCAGGACCTaGCACATGGGAGATGCTCAG +
Preference number: 5 (lower is better)
Translates to: CLQERTVWELTLQQMRVRCSSRT*HMGDAQ
Trigger: CTGAGCATCTCCCATGTGCAAGGTCCTGGAACTACA...CCTAACTCTCATCTGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CAA 90 bp ACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCTGGATAAGACCCACTTaGCCCACGTTGGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: THTHILCLQERTVWELTLWIRPT*PTLGKL
Trigger: CAGCTTCCCCAACGTGGGCAAAGTGGGTCTTATCCA...GAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp TACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTGCTGCCCATCCAAGTTaGCAGGATGGTAGACATACC +
Preference number: 5 (lower is better)
Translates to: YTHTYPLPTRKNSLGADSAAHPS*QDGRHT
Trigger: GGTATGTCTACCATCCTGCAAACTTGGATGGGCAGC...AGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp AATGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTCATGTGAGTTGATGACGTaGAAGCTCGCCTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: NAGVQVALIVHRQNLNHSCELMT*KLASRG
Trigger: GCCCCTGGAGGCGAGCTTCAACGTCATCAACTCACA...TGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CAA 90 bp TCCCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGGGAGAGGAGTGTGAGTaGATGACGTTGAAGCTCGCC +
Preference number: 5 (lower is better)
Translates to: SHVIHTHISSAYKKEQFGGEECE*MTLKLA
Trigger: GGCGAGCTTCAACGTCATCAACTCACACTCCTCTCC...CCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp CCATGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGAGGCATTCGAGCCTCTaGGGCAGTGAAAGGAGATGG +
Preference number: 5 (lower is better)
Translates to: PCNTHTHILCLQERTVWERHSSL*GSERRW
Trigger: CCATCTCCTTTCACTGCCCAAGAGGCTCGAATGCCT...CTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp TGTAATACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGAGGAAGTCTGTACACTaGAGCAGCCTTCTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: CNTHTHILCLQERTVWELRKSVH*SSLLPG
Trigger: CCCAGGGAGAAGGCTGCTCAAGTGTACAGACTTCCT...CAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTATTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp ATCTCAATCATTCATGGTCCACTAAATCATGGCCTCTGCTCTGGAACAGTTAGGTGTAGTTCCAGGACCTaGCACATGGGAGATGCTCAG +
Preference number: 5 (lower is better)
Translates to: ISIIHGPLNHGLCSGTVRCSSRT*HMGDAQ
Trigger: CTGAGCATCTCCCATGTGCAAGGTCCTGGAACTACA...CCTAACTGTTCCAGAGCAGAGGCCATGATTTAGTGGACCATGAATGATTGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CAA 90 bp TTAGTAATTACAAAGGTCTTTTTAAACCGTAAATGCCTTGAGACGGCATGGACCCAAATCCATGGTGCCTaGGTGGGGGCAGACAGTTCC +
Preference number: 5 (lower is better)
Translates to: LVITKVFLNRKCLETAWTQIHGA*VGADSS
Trigger: GGAACTGTCTGCCCCCACCAAGGCACCATGGATTTG...GGTCCATGCCGTCTCAAGGCATTTACGGTTTAAAAAGACCTTTGTAATTACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CAA 90 bp AATGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTCAAGGCATTCGAGCCTCTaGGGCAGTGAAAGGAGATGG +
Preference number: 5 (lower is better)
Translates to: NAGVQVALIVHRQNLNHSRHSSL*GSERRW
Trigger: CCATCTCCTTTCACTGCCCAAGAGGCTCGAATGCCT...TGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CAA 90 bp GTCTTTTTAAACCGTAAATGCCTTGAGACGGCATGGACCCTGTCTTATCCCTGTACAAGAAAGAACAGTTaGGGAGCTGACTCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: VFLNRKCLETAWTLSYPCTRKNS*GADSPA
Trigger: TGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGT...ACAGGGATAAGACAGGGTCCATGCCGTCTCAAGGCATTTACGGTTTAAAAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CAA 90 bp ACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCACAAGAAAGAACAGTTaGGGAGCTGACTCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: THTHILCLQERTVWELTLTRKNS*GADSPA
Trigger: TGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGT...GAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp ATCTCAATCATTCATGGTCCACTAAATCATGGCCTCTGCTCTGGAACAGTTAGGAGGCAACCCACCCTATaGGGAAATGGAACCTCTAGA +
Preference number: 5 (lower is better)
Translates to: ISIIHGPLNHGLCSGTVRRQPTL*GNGTSR
Trigger: TCTAGAGGTTCCATTTCCCAATAGGGTGGGTTGCCT...CCTAACTGTTCCAGAGCAGAGGCCATGATTTAGTGGACCATGAATGATTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CAA 90 bp AATGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTCATGGATAAGACCCACTTaGCCCACGTTGGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: NAGVQVALIVHRQNLNHSWIRPT*PTLGKL
Trigger: CAGCTTCCCCAACGTGGGCAAAGTGGGTCTTATCCA...TGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409878.8
CDS-3UTR CAA 90 bp AATGGAACCTCTAGACAGTCCCATGTAATACACACACACATATCCTCTGCCTACACAAGAAAGAACAGTTaGGGAGCTGACTCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: NGTSRQSHVIHTHISSAYTRKNS*GADSPA
Trigger: TGCTGGAGAGTCAGCTCCCAAACTGTTCTTTCTTGT...GTAGGCAGAGGATATGTGTGTGTGTATTACATGGGACTGTCTAGAGGTTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS-3UTR CAA 90 bp TGCTGGGGTTCAAGTGGCATTGATAGTACACAGGCAAAATCTCAATCATTCATGAGGCAACCCACCCTATaGGGAAATGGAACCTCTAGA +
Preference number: 5 (lower is better)
Translates to: CWGSSGIDSTQAKSQSFMRQPTL*GNGTSR
Trigger: TCTAGAGGTTCCATTTCCCAATAGGGTGGGTTGCCT...CATGAATGATTGAGATTTTGCCTGTGTACTATCAATGCCACTTGAACCCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CAA 90 bp ACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTCGGGGTTCAAGTGGCATaGATAGTACACAGGCAAAAT +
Preference number: 5 (lower is better)
Translates to: THTHILCLQERTVWELTLGVQVA*IVHRQN
Trigger: ATTTTGCCTGTGTACTATCAATGCCACTTGAACCCC...GAGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS-3UTR CAA 90 bp TACACACACACATATCCTCTGCCTACAAGAAAGAACAGTTTGGGAGCTGACTCTGGGGTTCAAGTGGCATaGATAGTACACAGGCAAAAT +
Preference number: 5 (lower is better)
Translates to: YTHTYPLPTRKNSLGADSGVQVA*IVHRQN
Trigger: ATTTTGCCTGTGTACTATCAATGCCACTTGAACCCC...AGAGTCAGCTCCCAAACTGTTCTTTCTTGTAGGCAGAGGATATGTGTGTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295738.11
ENST00000409878.8
CDS GCA 72 bp GACCCACTTTGCCCACGTTGGGGAAGCTGGATGCAGTaGCCATGGGGCTTCCCAGCAGCCCGGCCAGCACAC +
Preference number: 6 (lower is better)
Translates to: DPLCPRWGSWMQ*PWGFPAARPAH
Trigger: GTGTGCTGGCCGGGCTGCTGGGAAGCCCCATGGGCACTGCATCCAGCTTCCCCAACGTGGGCAAAGTGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409878.8
ENST00000455516.6
ENST00000497918.5
CDS CCA 72 bp GGGGCCAGGGCATCCTGGGAGCCCACTGATCGGAGTTaGCTGGGATTGAGGGGTGATCGGCTCATGCTGCCT +
Preference number: 6 (lower is better)
Translates to: GARASWEPTDRS*LGLRGDRLMLP
Trigger: AGGCAGCATGAGCCGATCACCCCTCAATCCCAGCCAACTCCGATCAGTGGGCTCCCAGGATGCCCTGGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000421779.2
ENST00000430764.2
ENST00000455516.6
ENST00000461812.1
ENST00000497918.5
CDS CCA 72 bp AGCAGCCCAGGGAACTGGTGGAGGCTGCCAAGGCCATaGAGATGCCTGCAGCCAGAGCTCTGGGCGTCAGCA +
Preference number: 6 (lower is better)
Translates to: SSPGNWWRLPRP*RCLQPELWASA
Trigger: TGCTGACGCCCAGAGCTCTGGCTGCAGGCATCTCCATGGCCTTGGCAGCCTCCACCAGTTCCCTGGGCTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409878.8
ENST00000455516.6
ENST00000497918.5
CDS TCA 72 bp CCAGCACCCCACCAACAACAGGCAGTGGGATGGTGGTaGGGAGCTGAGCCAACCTGGGGGAGAGTCCAAGCC +
Preference number: 6 (lower is better)
Translates to: PAPHQQQAVGWW*GAEPTWGRVQA
Trigger: GGCTTGGACTCTCCCCCAGGTTGGCTCAGCTCCTCACCACCATCCCACTGCCTGTTGTTGGTGGGGTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS GCA 72 bp GATAAGACCCACTTTGCCCACGTTGGGGAAGCTGGATaGAGTGCCCATGGGGCTTCCCAGCAGCCCGGCCAG +
Preference number: 6 (lower is better)
Translates to: DKTHFAHVGEAG*SAHGASQQPGQ
Trigger: CTGGCCGGGCTGCTGGGAAGCCCCATGGGCACTGCATCCAGCTTCCCCAACGTGGGCAAAGTGGGTCTTATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409878.8
ENST00000455516.6
ENST00000497918.5
CDS CAA 90 bp CCCATCCCAGGTCCACGTACCTGGATAAGACCCACTTTGCCCACGTaGGGGAAGCTGGATGCAGTGCCCATGGGGCTTCCCAGCAGCCCG +
Preference number: 6 (lower is better)
Translates to: PIPGPRTWIRPTLPT*GKLDAVPMGLPSSP
Trigger: CGGGCTGCTGGGAAGCCCCATGGGCACTGCATCCAGCTTCCCCAACGTGGGCAAAGTGGGTCTTATCCAGGTACGTGGACCTGGGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497918.5
CDS GCA 72 bp ACACAGGGCATAGCAGCCCAGGGAACTGGTGGAGGCTaGCAAGGCCATGGAGATGCCTGCAGCCAGAGCTCT +
Preference number: 6 (lower is better)
Translates to: TQGIAAQGTGGG*QGHGDACSQSS
Trigger: AGAGCTCTGGCTGCAGGCATCTCCATGGCCTTGGCAGCCTCCACCAGTTCCCTGGGCTGCTATGCCCTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409878.8
ENST00000455516.6
ENST00000497918.5
CDS CCA 72 bp GTGAGCAAGGCCAACCCCCAGTGTGTGAAGCAGAACTaGGCTACCTCCCTGTGGGCAGAGAGCCCTGCCACA +
Preference number: 6 (lower is better)
Translates to: VSKANPQCVKQN*ATSLWAESPAT
Trigger: TGTGGCAGGGCTCTCTGCCCACAGGGAGGTAGCCCAGTTCTGCTTCACACACTGGGGGTTGGCCTTGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295738.11
CDS CCA 72 bp ACCAGCAAGGCCAACCCCCAGTGTGTGAAGCAGAACTaGGCTACCTCCCTGTGGGCAGAGAGCCCTGCCACA +
Preference number: 6 (lower is better)
Translates to: TSKANPQCVKQN*ATSLWAESPAT
Trigger: TGTGGCAGGGCTCTCTGCCCACAGGGAGGTAGCCCAGTTCTGCTTCACACACTGGGGGTTGGCCTTGCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409370.6
ENST00000409878.8
ENST00000455516.6
CDS TCA 72 bp CATCCTGGGAGCCCACTGATCGGAGTTGGCTGGGATTaGGGGGTGATCGGCTCATGCTGCCTTGCCTTTCGC +
Preference number: 6 (lower is better)
Translates to: HPGSPLIGVGWD*GVIGSCCLAFR
Trigger: GCGAAAGGCAAGGCAGCATGAGCCGATCACCCCTCAATCCCAGCCAACTCCGATCAGTGGGCTCCCAGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000421779.2
ENST00000430764.2
ENST00000455516.6
ENST00000461812.1
ENST00000497918.5
CDS GCA 72 bp TGGCTGGGATTGAGGGGTGATCGGCTCATGCTGCCTTaGCTTTCGCTTTGTCTTGGCTGCCCGGGACCAGAG +
Preference number: 6 (lower is better)
Translates to: WLGLRGDRLMLP*LSLCLGCPGPE
Trigger: CTCTGGTCCCGGGCAGCCAAGACAAAGCGAAAGGCAAGGCAGCATGAGCCGATCACCCCTCAATCCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000421779.2
ENST00000455516.6
ENST00000461812.1
ENST00000497918.5
CDS CCA 72 bp CCCCAAGGCAGAGATCCACACAAAGGGTCCCAAGAGTaGGTGGAGGGATTCTGGGGAGCAGGTGGAGGCAAG +
Preference number: 6 (lower is better)
Translates to: PQGRDPHKGSQE*VEGFWGAGGGK
Trigger: CTTGCCTCCACCTGCTCCCCAGAATCCCTCCACCCACTCTTGGGACCCTTTGTGTGGATCTCTGCCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295738.11
ENST00000409370.6
ENST00000409878.8
ENST00000421779.2
ENST00000430764.2
ENST00000455516.6
ENST00000461812.1
ENST00000497918.5
CDS CCA 72 bp AGCCTGGGTGAGGCAGCCAAATCCATGGTGCCTTGGTaGGGGCAGACAGTTCCGAAAGGAGCCGGAAGACAG +
Preference number: 6 (lower is better)
Translates to: SLGEAAKSMVPW*GQTVPKGAGRQ
Trigger: CTGTCTTCCGGCTCCTTTCGGAACTGTCTGCCCCCACCAAGGCACCATGGATTTGGCTGCCTCACCCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295738.11
CDS CCA 72 bp TCCAGCCTGGGTGAGGCAGCCAAATCCATGGTGCCTTaGTGGGGGCAGACAGTTCCGAAAGGAGCCGGAAGA +
Preference number: 6 (lower is better)
Translates to: SSLGEAAKSMVP*WGQTVPKGAGR
Trigger: TCTTCCGGCTCCTTTCGGAACTGTCTGCCCCCACCAAGGCACCATGGATTTGGCTGCCTCACCCAGGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295738.11
CDS CCA 72 bp CTGCCAAGGCCATGGAGATGCCTGCAGCCAGAGCTCTaGGCGTCAGCAAAGGCCAATTCCACTCACCTGGGT +
Preference number: 6 (lower is better)
Translates to: LPRPWRCLQPEL*ASAKANSTHLG
Trigger: ACCCAGGTGAGTGGAATTGGCCTTTGCTGACGCCCAGAGCTCTGGCTGCAGGCATCTCCATGGCCTTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409878.8
ENST00000455516.6
ENST00000497918.5
CDS CCA 72 bp CTTGCCCTTGCTCTGTGCTCACAGTTTCCAGGTGTCTaGATGGCCCGGGGTAGCTTCTGGCTGGTCAGCACC +
Preference number: 6 (lower is better)
Translates to: LALALCSQFPGV*MARGSFWLVST
Trigger: GGTGCTGACCAGCCAGAAGCTACCCCGGGCCATCCAGACACCTGGAAACTGTGAGCACAGAGCAAGGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455516.6
CDS CAA 72 bp GGTCCACGTACCTGGATAAGACCCACTTTGCCCACGTaGGGGAAGCTGGATGCAGTGCCCATGGGGCTTCCC +
Preference number: 6 (lower is better)
Translates to: GPRTWIRPTLPT*GKLDAVPMGLP
Trigger: GGGAAGCCCCATGGGCACTGCATCCAGCTTCCCCAACGTGGGCAAAGTGGGTCTTATCCAGGTACGTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497918.5
CDS TCA 72 bp CCCTGGGCTTCTGAGGCATTCGAGCCTCTTGGGCAGTaGAAGGAGATGGTAGCCCTTGACCTAGGCCTCGCT +
Preference number: 6 (lower is better)
Translates to: PWASEAFEPLGQ*KEMVALDLGLA
Trigger: AGCGAGGCCTAGGTCAAGGGCTACCATCTCCTTTCACTGCCCAAGAGGCTCGAATGCCTCAGAAGCCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS CCA 72 bp CCATCCTACCCCACTCCCATCCCAGGTCCACGTACCTaGATAAGACCCACTTTGCCCACGTTGGGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: PSYPTPIPGPRT*IRPTLPTLGKL
Trigger: CAGCTTCCCCAACGTGGGCAAAGTGGGTCTTATCCAGGTACGTGGACCTGGGATGGGAGTGGGGTAGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497918.5
CDS CAA 72 bp CCCATCCCAGGTCCACGTACCTGGATAAGACCCACTTaGCCCACGTTGGGGAAGCTGGATGCAGTGCCCATG +
Preference number: 6 (lower is better)
Translates to: PIPGPRTWIRPT*PTLGKLDAVPM
Trigger: CATGGGCACTGCATCCAGCTTCCCCAACGTGGGCAAAGTGGGTCTTATCCAGGTACGTGGACCTGGGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497918.5
CDS TCA 72 bp AGTTCCGAAAGGAGCCGGAAGACAGGGAGAGGAGTGTaGGTTGATGACGTTGAAGCTCGCCTCCAGGGGCAC +
Preference number: 6 (lower is better)
Translates to: SSERSRKTGRGV*VDDVEARLQGH
Trigger: GTGCCCCTGGAGGCGAGCTTCAACGTCATCAACTCACACTCCTCTCCCTGTCTTCCGGCTCCTTTCGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295738.11
CDS TCA 72 bp CGAGCCTCTTGGGCAGTGAAAGGAGATGGTAGCCCTTaGCCTAGGCCTCGCTCAAGCTGTGTGCCAGGAATC +
Preference number: 6 (lower is better)
Translates to: RASWAVKGDGSP*PRPRSSCVPGI
Trigger: GATTCCTGGCACACAGCTTGAGCGAGGCCTAGGTCAAGGGCTACCATCTCCTTTCACTGCCCAAGAGGCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS TCA 72 bp CATACCGAAAGGAGCCGGAAGACAGGGAGAGGAGTGTaGGTTGATGACGTTGAAGCTCGCCTCCAGGGGCAC +
Preference number: 6 (lower is better)
Translates to: HTERSRKTGRGV*VDDVEARLQGH
Trigger: GTGCCCCTGGAGGCGAGCTTCAACGTCATCAACTCACACTCCTCTCCCTGTCTTCCGGCTCCTTTCGGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497918.5
CDS TCA 72 bp AAACCCTTCTCTGCTAGATTCAGGGCATGGCTCCCCTaGGCCAGGCAGCAAGTCTGCCATCTCTTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: KPFSARFRAWLP*ARQQVCHLFWL
Trigger: GAGCCAGAAGAGATGGCAGACTTGCTGCCTGGCTCAGGGGAGCCATGCCCTGAATCTAGCAGAGAAGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS GCA 72 bp AGTCCAGCCAGGAAGATGGGCTGTGTCAGCAGTGAGTaGAGTAATACATCCAAGGGGCTCCAGCCTGTGCTG +
Preference number: 6 (lower is better)
Translates to: SPARKMGCVSSE*SNTSKGLQPVL
Trigger: CAGCACAGGCTGGAGCCCCTTGGATGTATTACTGCACTCACTGCTGACACAGCCCATCTTCCTGGCTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS CCA 72 bp ACCAGAGCAGGGATAAGGAACTCTAAGGATGGAGCCTaGACAAGAGGCAGCCTGCTGCCCATCCAAGTTTGC +
Preference number: 6 (lower is better)
Translates to: TRAGIRNSKDGA*TRGSLLPIQVC
Trigger: GCAAACTTGGATGGGCAGCAGGCTGCCTCTTGTCCAGGCTCCATCCTTAGAGTTCCTTATCCCTGCTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295738.11
ENST00000409370.6
ENST00000409878.8
ENST00000421779.2
ENST00000455516.6
ENST00000465580.3
ENST00000497918.5
CDS CCA 72 bp TATTTCGCCCAGAGTCTATGTCAGCCAGGTAGAAGCTaGAGAATCCAGCAGACAAAACCACAGCCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: YFAQSLCQPGRS*RIQQTKPQPGS
Trigger: TGACCCAGGCTGTGGTTTTGTCTGCTGGATTCTCCAGCTTCTACCTGGCTGACATAGACTCTGGGCGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS CCA 72 bp TCTCTAGTAGGAAGCCTGAGAGTCCAGCCAGGAAGATaGGCTGTGTCAGCAGTGAGTGCAGTAATACATCCA +
Preference number: 6 (lower is better)
Translates to: SLVGSLRVQPGR*AVSAVSAVIHP
Trigger: TGGATGTATTACTGCACTCACTGCTGACACAGCCCATCTTCCTGGCTGGACTCTCAGGCTTCCTACTAGAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6
CDS CAA 90 bp CCCCAAGAGAGCAGAACTTTATGTGACTGGTTCTTTGCCCTAGCCTaGATACAGTGCCTCATGCACAGGAGTTCCGTGGTGATTTGTTCA +
Preference number: 6 (lower is better)
Translates to: PQESRTLCDWFFALA*IQCLMHRSSVVICS
Trigger: TGAACAAATCACCACGGAACTCCTGTGCATGAGGCACTGTATCAAGGCTAGGGCAAAGAACCAGTCACATAAAGTTCTGCTCTCTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497918.5
CDS TCA 72 bp CCCTCTATGAAGTCCCCAAGAGAGCAGAACTTTATGTaGCTGGTTCTTTGCCCTAGCCTTGATACAGTGCCT +
Preference number: 6 (lower is better)
Translates to: PSMKSPREQNFM*LVLCPSLDTVP
Trigger: AGGCACTGTATCAAGGCTAGGGCAAAGAACCAGTCACATAAAGTTCTGCTCTCTTGGGGACTTCATAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497918.5
CDS CCA 72 bp ATTAACCAGGGCAGAAGTAGGCGTTCTGGTCATTTCTaGGACCTAAACCCTTCTCTGCTAGATTCAGGGCAT +
Preference number: 6 (lower is better)
Translates to: INQGRSRRSGHF*DLNPSLLDSGH
Trigger: ATGCCCTGAATCTAGCAGAGAAGGGTTTAGGTCCCAGAAATGACCAGAACGCCTACTTCTGCCCTGGTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295738.11
ENST00000409878.8
ENST00000455516.6