RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC23A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000089057

Ensembl transcript IDs: ENST00000338244.6, ENST00000379333.5, ENST00000423430.1, ENST00000468355.5, ENST00000496331.1

Found 733 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAGGCCCGGAGCCGCACACTAACGCGGCGTGCAGCAGGTGTGGCTaGGTGTGCACAGCTGGCGTCCAGCGACAGCCATGCCGGGCCTAT +
Preference number: 1 (lower is better)
Translates to: SGPEPHTNAACSRCG*VCTAGVQRQPCRAY
Trigger: ATAGGCCCGGCATGGCTGTCGCTGGACGCCAGCTGTGCACACCCAGCCACACCTGCTGCACGCCGCGTTAGTGTGCGGCTCCGGGCCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 90 bp GCCTGGGGCCGAGGGGGACAGGAATGCACCGTGTGGACACCAGGCTaGCAAGAACCATGCCCTGCCGCTGGAGACAGGAGACAGGCACCC +
Preference number: 1 (lower is better)
Translates to: AWGRGGQECTVWTPG*QEPCPAAGDRRQAP
Trigger: GGGTGCCTGTCTCCTGTCTCCAGCGGCAGGGCATGGTTCTTGGCAGCCTGGTGTCCACACGGTGCATTCCTGTCCCCCTCGGCCCCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 90 bp CCGGAGCCGCACACTAACGCGGCGTGCAGCAGGTGTGGCTGGGTGTaGACAGCTGGCGTCCAGCGACAGCCATGCCGGGCCTATGCCTAT +
Preference number: 1 (lower is better)
Translates to: PEPHTNAACSRCGWV*TAGVQRQPCRAYAY
Trigger: ATAGGCATAGGCCCGGCATGGCTGTCGCTGGACGCCAGCTGTGCACACCCAGCCACACCTGCTGCACGCCGCGTTAGTGTGCGGCTCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 90 bp AACCATGCCCTGCCGCTGGAGACAGGAGACAGGCACCCACGCAGCTaGCCAAAGCTCGACCAGGCCAACGGCCACCGAAGATGTGCCACC +
Preference number: 1 (lower is better)
Translates to: NHALPLETGDRHPRS*PKLDQANGHRRCAT
Trigger: GGTGGCACATCTTCGGTGGCCGTTGGCCTGGTCGAGCTTTGGTCAGCTGCGTGGGTGCCTGTCTCCTGTCTCCAGCGGCAGGGCATGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 90 bp AGCAGGTGTGGCTGGGTGTGCACAGCTGGCGTCCAGCGACAGCCATaGCGGGCCTATGCCTATAGCGAGTGTACACCCCATGCACGGCCA +
Preference number: 1 (lower is better)
Translates to: SRCGWVCTAGVQRQP*RAYAYSECTPHARP
Trigger: TGGCCGTGCATGGGGTGTACACTCGCTATAGGCATAGGCCCGGCATGGCTGTCGCTGGACGCCAGCTGTGCACACCCAGCCACACCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp AGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTCCACGTaGCGGCTCTGCGTGTTACCTGCCCCAGCTTCCCTTCTTCACAAA +
Preference number: 1 (lower is better)
Translates to: RSPASGTDRRTDRST*RLCVLPAPASLLHK
Trigger: TTTGTGAAGAAGGGAAGCTGGGGCAGGTAACACGCAGAGCCGCCACGTGGAACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 90 bp TTCCAAAGCCAAGAGGAGGCTCCCTGGAGAAGCGAGCTTTGCGAATaGTCAGGCCCGGAGCCGCACACTAACGCGGCGTGCAGCAGGTGT +
Preference number: 1 (lower is better)
Translates to: FQSQEEAPWRSELCE*SGPEPHTNAACSRC
Trigger: ACACCTGCTGCACGCCGCGTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGCCTCCTCTTGGCTTTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 90 bp GCTCTTTTCCAAAGCCAAGAGGAGGCTCCCTGGAGAAGCGAGCTTTaGGAATGCTCAGGCCCGGAGCCGCACACTAACGCGGCGTGCAGC +
Preference number: 1 (lower is better)
Translates to: ALFQSQEEAPWRSEL*ECSGPEPHTNAACS
Trigger: GCTGCACGCCGCGTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGCCTCCTCTTGGCTTTGGAAAAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 90 bp GAACGCTGGCAAAACCGGGTGGCCGTTCTTGCACTACTCGGGTTCTaGCTGCAGGAGGGGCAGAGGGTGGTCGATGTCCTAGTCCCTGTG +
Preference number: 1 (lower is better)
Translates to: ERWQNRVAVLALLGF*LQEGQRVVDVLVPV
Trigger: CACAGGGACTAGGACATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGGCCACCCGGTTTTGCCAGCGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp GCCTTATGGGTCCATGGGCAGACGCTGAACGCTGGCAAAACCGGGTaGCCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGA +
Preference number: 1 (lower is better)
Translates to: ALWVHGQTLNAGKTG*PFLHYSGSDCRRGR
Trigger: TCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGGCCACCCGGTTTTGCCAGCGTTCAGCGTCTGCCCATGGACCCATAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 90 bp CCCCTTGGTCAGAGGAGGTCTCCGCGGGCACAGACGAGGGTCAAATaGCAAGGAAACAGGTCCAGGGGCTTCGGAGAGAGAGAGAAAGCC +
Preference number: 1 (lower is better)
Translates to: PLGQRRSPRAQTRVK*QGNRSRGFGEREKA
Trigger: GGCTTTCTCTCTCTCTCCGAAGCCCCTGGACCTGTTTCCTTGTCATTTGACCCTCGTCTGTGCCCGCGGAGACCTCCTCTGACCAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp TCCAGGGGCTTCGGAGAGAGAGAGAAAGCCCCTGGACCCTGGAGGTaGCTTATAGGAAAGCCAGCCCTGGGTGGTGGAAGGGAACTGAAG +
Preference number: 1 (lower is better)
Translates to: SRGFGEREKAPGPWR*LIGKPALGGGRELK
Trigger: CTTCAGTTCCCTTCCACCACCCAGGGCTGGCTTTCCTATAAGCCACCTCCAGGGTCCAGGGGCTTTCTCTCTCTCTCCGAAGCCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp AACAGGTCCAGGGGCTTCGGAGAGAGAGAGAAAGCCCCTGGACCCTaGAGGTGGCTTATAGGAAAGCCAGCCCTGGGTGGTGGAAGGGAA +
Preference number: 1 (lower is better)
Translates to: NRSRGFGEREKAPGP*RWLIGKPALGGGRE
Trigger: TTCCCTTCCACCACCCAGGGCTGGCTTTCCTATAAGCCACCTCCAGGGTCCAGGGGCTTTCTCTCTCTCTCCGAAGCCCCTGGACCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp ACAAGGAAACAGGTCCAGGGGCTTCGGAGAGAGAGAGAAAGCCCCTaGACCCTGGAGGTGGCTTATAGGAAAGCCAGCCCTGGGTGGTGG +
Preference number: 1 (lower is better)
Translates to: TRKQVQGLRRERESP*TLEVAYRKASPGWW
Trigger: CCACCACCCAGGGCTGGCTTTCCTATAAGCCACCTCCAGGGTCCAGGGGCTTTCTCTCTCTCTCCGAAGCCCCTGGACCTGTTTCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 90 bp GTACGGGGTGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTaGATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTC +
Preference number: 1 (lower is better)
Translates to: VRGGGSKPQQRRPMM*MGSVMTQTASGHRV
Trigger: GACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCACCCCGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 90 bp GAGACCCCCAACGCTAATGTGCCTTATGGGTCCATGGGCAGACGCTaGACGCTGGCAAAACCGGGTGGCCGTTCTTGCACTACTCGGGTT +
Preference number: 1 (lower is better)
Translates to: ETPNANVPYGSMGRR*TLAKPGGRSCTTRV
Trigger: AACCCGAGTAGTGCAAGAACGGCCACCCGGTTTTGCCAGCGTTCAGCGTCTGCCCATGGACCCATAAGGCACATTAGCGTTGGGGGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 90 bp TGTGCACGTGCTGGCCCGGTCAGGGCCAGGGTGGCCAAGAGAAGGTaGAGCCGAGAATCAGATATTGGCTTCAGGGTCCTTTCCTTTTCC +
Preference number: 1 (lower is better)
Translates to: CARAGPVRARVAKRR*SRESDIGFRVLSFS
Trigger: GGAAAAGGAAAGGACCCTGAAGCCAATATCTGATTCTCGGCTGCACCTTCTCTTGGCCACCCTGGCCCTGACCGGGCCAGCACGTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 90 bp ACGCAGCTGACCAAAGCTCGACCAGGCCAACGGCCACCGAAGATGTaGCACCTCATGAAGCGAGGGCACTGCTTCCTATCTCAGGCCTTT +
Preference number: 1 (lower is better)
Translates to: TQLTKARPGQRPPKM*HLMKRGHCFLSQAF
Trigger: AAAGGCCTGAGATAGGAAGCAGTGCCCTCGCTTCATGAGGTGGCACATCTTCGGTGGCCGTTGGCCTGGTCGAGCTTTGGTCAGCTGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp ACGTTAAGTCCCTGGGCTCTTTTCCAAAGCCAAGAGGAGGCTCCCTaGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACT +
Preference number: 1 (lower is better)
Translates to: TLSPWALFQSQEEAP*RSELCECSGPEPHT
Trigger: AGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGCCTCCTCTTGGCTTTGGAAAAGAGCCCAGGGACTTAACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 90 bp CCAAAGCTCGACCAGGCCAACGGCCACCGAAGATGTGCCACCTCATaGAGCGAGGGCACTGCTTCCTATCTCAGGCCTTTTCCTTCACTG +
Preference number: 1 (lower is better)
Translates to: PKLDQANGHRRCATS*SEGTASYLRPFPSL
Trigger: CAGTGAAGGAAAAGGCCTGAGATAGGAAGCAGTGCCCTCGCTTCATGAGGTGGCACATCTTCGGTGGCCGTTGGCCTGGTCGAGCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp ACTGGGCCAGTCAGTCATGATAGCGCAAGGCATACTAGTGCCCCTTaGTCAGAGGAGGTCTCCGCGGGCACAGACGAGGGTCAAATGACA +
Preference number: 1 (lower is better)
Translates to: TGPVSHDSARHTSAP*SEEVSAGTDEGQMT
Trigger: TGTCATTTGACCCTCGTCTGTGCCCGCGGAGACCTCCTCTGACCAAGGGGCACTAGTATGCCTTGCGCTATCATGACTGACTGGCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 90 bp CCACATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTaGCTTGGGTGGCACTCTATACTCATCACACCGGCCAACAGTGAT +
Preference number: 1 (lower is better)
Translates to: PHDGRAKTPISLCDW*LGWHSILITPANSD
Trigger: ATCACTGTTGGCCGGTGTGATGAGTATAGAGTGCCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp CATCCACATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTaGTGCCTTGGGTGGCACTCTATACTCATCACACCGGCCAACAGT +
Preference number: 1 (lower is better)
Translates to: HPHDGRAKTPISLCD*CLGWHSILITPANS
Trigger: ACTGTTGGCCGGTGTGATGAGTATAGAGTGCCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATGTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 90 bp AGACCGGCGGACAGACCGTTCCACGTGGCGGCTCTGCGTGTTACCTaGCCCAGCTTCCCTTCTTCACAAAACAAATTCACGTGTAACTTG +
Preference number: 1 (lower is better)
Translates to: RPADRPFHVAALRVT*PSFPSSQNKFTCNL
Trigger: CAAGTTACACGTGAATTTGTTTTGTGAAGAAGGGAAGCTGGGGCAGGTAACACGCAGAGCCGCCACGTGGAACGGTCTGTCCGCCGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp GATACAACCCGGCCCAAGGAGGGGCTTCAGAAGGGAGTGGGTTTCTaGATGACTAGAGCAGACACCTTGAGTGTTATGCAGCGGAAGACG +
Preference number: 1 (lower is better)
Translates to: DTTRPKEGLQKGVGF*MTRADTLSVMQRKT
Trigger: CGTCTTCCGCTGCATAACACTCAAGGTGTCTGCTCTAGTCATCCAGAAACCCACTCCCTTCTGAAGCCCCTCCTTGGGCCGGGTTGTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp CGGCCATCCCCCAGGATGCTGCTGCTTCTCTGGCCAGATGGGTTCTaGAATGAGGCTTCTGCTACTGCTCCATATTCACCTTCAATCTGG +
Preference number: 1 (lower is better)
Translates to: RPSPRMLLLLWPDGF*NEASATAPYSPSIW
Trigger: CCAGATTGAAGGTGAATATGGAGCAGTAGCAGAAGCCTCATTCCAGAACCCATCTGGCCAGAGAAGCAGCAGCATCCTGGGGGATGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 90 bp ATCCCCCAGGATGCTGCTGCTTCTCTGGCCAGATGGGTTCTGGAATaGGGCTTCTGCTACTGCTCCATATTCACCTTCAATCTGGCCTGG +
Preference number: 1 (lower is better)
Translates to: IPQDAAASLARWVLE*GFCYCSIFTFNLAW
Trigger: CCAGGCCAGATTGAAGGTGAATATGGAGCAGTAGCAGAAGCCTCATTCCAGAACCCATCTGGCCAGAGAAGCAGCAGCATCCTGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp TGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAAGAGGGATaGAAACCGCGAGCCAGTGTGCTTCTAAAGTATGCATCAAAGACA +
Preference number: 1 (lower is better)
Translates to: CRRAASLKSVPRQEG*KPRASVLLKYASKT
Trigger: TGTCTTTGATGCATACTTTAGAAGCACACTGGCTCGCGGTTTCCATCCCTCTTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp AAAGTCATGAGGGGACAGAGTACAACAGGCAGCACGTTAAGTCCCTaGGCTCTTTTCCAAAGCCAAGAGGAGGCTCCCTGGAGAAGCGAG +
Preference number: 1 (lower is better)
Translates to: KVMRGQSTTGSTLSP*ALFQSQEEAPWRSE
Trigger: CTCGCTTCTCCAGGGAGCCTCCTCTTGGCTTTGGAAAAGAGCCCAGGGACTTAACGTGCTGCCTGTTGTACTCTGTCCCCTCATGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 90 bp AAAATCCAAACAGAAGGAACTGAGAGCAACTCATTGCAGGAGGGCTaGCAGCCTCAAGAGTGTCCCAAGGCAAGAGGGATGGAAACCGCG +
Preference number: 1 (lower is better)
Translates to: KIQTEGTESNSLQEG*QPQECPKARGMETA
Trigger: CGCGGTTTCCATCCCTCTTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAGTTCCTTCTGTTTGGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 90 bp AGGCGAGACACCGCATCAGGCACCATCACCCTCACAGCAGAAAAGTaGTTCGCAGTCTGTCTTAGCTCTGGGGCGCAGAATGTAAATGTA +
Preference number: 1 (lower is better)
Translates to: RRDTASGTITLTAEK*FAVCLSSGAQNVNV
Trigger: TACATTTACATTCTGCGCCCCAGAGCTAAGACAGACTGCGAATCACTTTTCTGCTGTGAGGGTGATGGTGCCTGATGCGGTGTCTCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp CCCACCTCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTaGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGAG +
Preference number: 1 (lower is better)
Translates to: PTSYSLTPPRTELLG*PQWNQNRKLSLQQE
Trigger: CTCCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGAGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 90 bp TCACCTCCTGTCCGTATTCACGCTGTCTACATTTCATGTTGGGATTaGCCACACAAATGCTTTCTTTCAGGGACCAGGCAGGTGACCTGG +
Preference number: 1 (lower is better)
Translates to: SPPVRIHAVYISCWD*PHKCFLSGTRQVTW
Trigger: CCAGGTCACCTGCCTGGTCCCTGAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATACGGACAGGAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp CTCTTAAGTGAGAGGGAGCCTGTTGGCTGCTTTTCTTATCACCTTTaGCAACCACCCTCACCTGTAAAATCAAGATCTAACGGACGTGCG +
Preference number: 1 (lower is better)
Translates to: LLSEREPVGCFSYHL*QPPSPVKSRSNGRA
Trigger: CGCACGTCCGTTAGATCTTGATTTTACAGGTGAGGGTGGTTGCCAAAGGTGATAAGAAAAGCAGCCAACAGGCTCCCTCTCACTTAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp TATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTaGAATCAGAACAGGAAACTCTCACTCCAACAGGAGTTGAAAGGG +
Preference number: 1 (lower is better)
Translates to: YSLTPPRTELLGWPQ*NQNRKLSLQQELKG
Trigger: CCCTTTCAACTCCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp TTCTGGAATGAGGCTTCTGCTACTGCTCCATATTCACCTTCAATCTaGCCTGGCCACTCCCATGGCATCCGTATTACTGAAGATGAGACT +
Preference number: 1 (lower is better)
Translates to: FWNEASATAPYSPSI*PGHSHGIRITEDET
Trigger: AGTCTCATCTTCAGTAATACGGATGCCATGGGAGTGGCCAGGCCAGATTGAAGGTGAATATGGAGCAGTAGCAGAAGCCTCATTCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp AAGACGCCCAGTCAAGCTGAAGAGAAGGTGCCCCTGGATCACCAATaGCTTTCAGGCTTTTATTTGGATATTTGGTCTTTCTGCTCACCT +
Preference number: 1 (lower is better)
Translates to: KTPSQAEEKVPLDHQ*LSGFYLDIWSFCSP
Trigger: AGGTGAGCAGAAAGACCAAATATCCAAATAAAAGCCTGAAAGCCATTGGTGATCCAGGGGCACCTTCTCTTCAGCTTGACTGGGCGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 90 bp CATGAAGCGAGGGCACTGCTTCCTATCTCAGGCCTTTTCCTTCACTaGAAAACTTCAAACCAAACCAAGAGGAGTCATTTCTCAGGAAGA +
Preference number: 1 (lower is better)
Translates to: HEARALLPISGLFLH*KTSNQTKRSHFSGR
Trigger: TCTTCCTGAGAAATGACTCCTCTTGGTTTGGTTTGAAGTTTTTCAGTGAAGGAAAAGGCCTGAGATAGGAAGCAGTGCCCTCGCTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp CAAGGAATGGCTGCAGATTTTAAATGTCCACTCCAAAGGGAGGACTaGAACTTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCA +
Preference number: 1 (lower is better)
Translates to: QGMAADFKCPLQRED*NFKFSDHGQQWTLS
Trigger: TGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAAGTTCCAGTCCTCCCTTTGGAGTGGACATTTAAAATCTGCAGCCATTCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 90 bp GTATTCTACAGCATAAAGCAAAACCTCTGTGCGAATTTGTTACCATaGAAACGGGAAACCATCAGGACCCATGATGCTTCATTCTGGCTG +
Preference number: 1 (lower is better)
Translates to: VFYSIKQNLCANLLP*KRETIRTHDASFWL
Trigger: CAGCCAGAATGAAGCATCATGGGTCCTGATGGTTTCCCGTTTTCATGGTAACAAATTCGCACAGAGGTTTTGCTTTATGCTGTAGAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp TTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTaGCCTTCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCAC +
Preference number: 1 (lower is better)
Translates to: FMVSSNTKHNHNNGY*PSKAVTTSFPDGVH
Trigger: GTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGAAGGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 90 bp ATGGCTTTCAGGCTTTTATTTGGATATTTGGTCTTTCTGCTCACCTaGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTT +
Preference number: 1 (lower is better)
Translates to: MAFRLLFGYLVFLLT*RARRLQISGMFSSF
Trigger: AAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGAGCAGAAAGACCAAATATCCAAATAAAAGCCTGAAAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACAGGCCAGTGTGCACGTaGTGGCCCGGTCAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: APWRSELCECSGPEPHTNRPVCT*WPGQGQ
Trigger: CTGGCCCTGACCGGGCCAGCACGTGCACACTGGCCT...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACACCCATGGCCAGATCTaGGCACAGGGGAGCCACGCC +
Preference number: 2 (lower is better)
Translates to: APWRSELCECSGPEPHTNTHGQI*AQGSHA
Trigger: GGCGTGGCTCCCCTGTGCCCAGATCTGGCCATGGGT...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 90 bp GTCCATGGGCAGACGCTGAACGCTGGCAAAACCGGGTGGCCGTTCTaGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCG +
Preference number: 2 (lower is better)
Translates to: VHGQTLNAGKTGWPF*HYSGSDCRRGRGWS
Trigger: CGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGGCCACCCGGTTTTGCCAGCGTTCAGCGTCTGCCCATGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGAGGCACCCACGCAGCTaGCCAAAGCTCGACCAGGCC +
Preference number: 2 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMRHPRS*PKLDQA
Trigger: GGCCTGGTCGAGCTTTGGTCAGCTGCGTGGGTGCCT...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGAGGTGTGGCTGGGTGTaGACAGCTGGCGTCCAGCGA +
Preference number: 2 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMRCGWV*TAGVQR
Trigger: TCGCTGGACGCCAGCTGTGCACACCCAGCCACACCT...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 90 bp GACGTGCGACATGGCAACCCACAGGAAGTCTCCTTAAGCCAAGACTaGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCG +
Preference number: 2 (lower is better)
Translates to: DVRHGNPQEVSLSQD*QQKPGKRDRPADRP
Trigger: CGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGAGACTTCCTGTGGGTTGCCATGTCGCACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACAGATGTGCCACCTCATaGAGCGAGGGCACTGCTTCC +
Preference number: 2 (lower is better)
Translates to: APWRSELCECSGPEPHTNRCATS*SEGTAS
Trigger: GGAAGCAGTGCCCTCGCTTCATGAGGTGGCACATCT...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACGAATGGGAAGTGTCATaGCACAGACCGCGAGTGGCC +
Preference number: 2 (lower is better)
Translates to: APWRSELCECSGPEPHTNEWEVS*HRPRVA
Trigger: GGCCACTCGCGGTCTGTGTCATGACACTTCCCATTC...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACCTTCCCATTATTCTGTaGAGCAGGGGTGGGGGCCCT +
Preference number: 2 (lower is better)
Translates to: APWRSELCECSGPEPHTNLPIIL*SRGGGP
Trigger: AGGGCCCCCACCCCTGCTTCACAGAATAATGGGAAG...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGAGATACATGCCTCACTaGGGCCAGGCCACAGGGCAC +
Preference number: 2 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMRYMPH*GQATGH
Trigger: GTGCCCTGTGGCCTGGCCGCAGTGAGGCATGTATCT...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACACCTTCAATCTGGCCTaGCCACTCCCATGGCATCCG +
Preference number: 2 (lower is better)
Translates to: APWRSELCECSGPEPHTNTFNLA*PLPWHP
Trigger: CGGATGCCATGGGAGTGGCCAGGCCAGATTGAAGGT...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACGTGGTGGAAGGGAACTaGAGCAAGGAATGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: APWRSELCECSGPEPHTNVVEGN*SKEWLQ
Trigger: CTGCAGCCATTCCTTGCTTCAGTTCCCTTCCACCAC...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTGGAACTACAGATACATaGCTCACTGCGGCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: PRLATEARQAGQTGGQTVGTTDT*LTAARP
Trigger: TGGCCTGGCCGCAGTGAGGCATGTATCTGTAGTTCC...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACCAAAGTACGGGGTGGTaGTTCAAAGCCCCAGCAACG +
Preference number: 2 (lower is better)
Translates to: APWRSELCECSGPEPHTNQSTGW*FKAPAT
Trigger: CGTTGCTGGGGCTTTGAACCACCACCCCGTACTTTG...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGAGGCACCCACGCAGCTaGCCAAAGCTCGACCAGGCC +
Preference number: 2 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLRHPRS*PKLDQA
Trigger: GGCCTGGTCGAGCTTTGGTCAGCTGCGTGGGTGCCT...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAAGAAAAGAGGCCAGTGTaGACGTGCTGGCCCGGTCAG +
Preference number: 2 (lower is better)
Translates to: LRATHCRRAASLKSVPRQEKRPV*TCWPGQ
Trigger: CTGACCGGGCCAGCACGTGCACACTGGCCTCTTTTC...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACAAGCTGAAGAGAAGGTaGCCCTGGATCACCAATGGC +
Preference number: 2 (lower is better)
Translates to: APWRSELCECSGPEPHTNKLKRR*PWITNG
Trigger: GCCATTGGTGATCCAGGGGCACCTTCTCTTCAGCTT...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACGACCATGGCCAGCAATaGACACTCTCAAAGGGCAAG +
Preference number: 2 (lower is better)
Translates to: APWRSELCECSGPEPHTNDHGQQ*TLSKGK
Trigger: CTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTC...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACGAGAGAGAAAGCCCCTaGACCCTGGAGGTGGCTTAT +
Preference number: 2 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADERESP*TLEVAY
Trigger: ATAAGCCACCTCCAGGGTCCAGGGGCTTTCTCTCTC...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACGGTAGGTGGTCTCTGTaGAAACTGGAGACTAACCGG +
Preference number: 2 (lower is better)
Translates to: APWRSELCECSGPEPHTNGRWSL*KLETNR
Trigger: CCGGTTAGTCTCCAGTTTCCACAGAGACCACCTACC...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACCAGACGAGGGTCAAATaGCAAGGAAACAGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADQTRVK*QGNRSR
Trigger: CCTGGACCTGTTTCCTTGTCATTTGACCCTCGTCTG...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACCGGCCACTAGTGAAATaGAAAGAGGCCAGTGTGCAC +
Preference number: 2 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADRPLVK*KEASVH
Trigger: GTGCACACTGGCCTCTTTTCATTTCACTAGTGGCCG...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTGCTTCCTTCCCTGTGTaGAGGCCTACAGAGGGCACC +
Preference number: 2 (lower is better)
Translates to: NGKCHDTDREWPPCPPISASFPV*RPTEGT
Trigger: GGTGCCCTCTGTAGGCCTTCACACAGGGAAGGAAGC...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGAACCATCAGGACCCATaGTGCTTCATTCTGGCTGGC +
Preference number: 2 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMNHQDP*CFILAG
Trigger: GCCAGCCAGAATGAAGCATCATGGGTCCTGATGGTT...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGAGATGGGTTCTGGAATaGGGCTTCTGCTACTGCTCC +
Preference number: 2 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMRWVLE*GFCYCS
Trigger: GGAGCAGTAGCAGAAGCCTCATTCCAGAACCCATCT...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATAGGCCAGTGTGCACGTaGTGGCCCGGTCAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNRPVCT*WPGQGQ
Trigger: CTGGCCCTGACCGGGCCAGCACGTGCACACTGGCCT...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACACGGCCACCGAAGATGTaGCACCTCATGAAGCGAGGG +
Preference number: 2 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTRPPKM*HLMKRG
Trigger: CCCTCGCTTCATGAGGTGGCACATCTTCGGTGGCCG...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGGGCTGCCAAGAACCATaGCCTGCCGCTGGAGACAGG +
Preference number: 2 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLGCQEP*PAAGDR
Trigger: CCTGTCTCCAGCGGCAGGGCATGGTTCTTGGCAGCC...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATCCAGTGTGCACGTGCTaGCCCGGTCAGGGCCAGGGT +
Preference number: 2 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNPVCTC*PGQGQG
Trigger: ACCCTGGCCCTGACCGGGCCAGCACGTGCACACTGG...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGAAGGTGGTGGGTAGGTaGTCTCTGTGGAAACTGGAG +
Preference number: 2 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMKVVGR*SLWKLE
Trigger: CTCCAGTTTCCACAGAGACCACCTACCCACCACCTT...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGGCCCATCAGCTTGTGTaGCTGGTGCCTTGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLAHQLV*LVPWVA
Trigger: TGCCACCCAAGGCACCAGTCACACAAGCTGATGGGC...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGGACGCCCAGTCAAGCTaGAGAGAAGGTGCCCCTGGA +
Preference number: 2 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLDAQSS*REGAPG
Trigger: TCCAGGGGCACCTTCTCTTCAGCTTGACTGGGCGTC...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGAGCTTGTGTGACTGGTaGCTTGGGTGGCACTCTATA +
Preference number: 2 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMSLCDW*LGWHSI
Trigger: TATAGAGTGCCACCCAAGGCACCAGTCACACAAGCT...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATTCCACGTGGCGGCTCTaGGTGTTACCTGCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: WWFKAPATQANDVNGKCHSTWRL*VLPAPA
Trigger: AGCTGGGGCAGGTAACACGCAGAGCCGCCACGTGGA...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACCGAGGGGGACAGGAATaGACCGTGTGGACACCAGGC +
Preference number: 2 (lower is better)
Translates to: WFKAPATQANDVNGKCHDRGGQE*TVWTPG
Trigger: GCCTGGTGTCCACACGGTGCATTCCTGTCCCCCTCG...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAAGTGACATGGCAATGCTaGAAAGACAGCGCCGCAGCA +
Preference number: 2 (lower is better)
Translates to: LRATHCRRAASLKSVPRQVTWQC*KDSAAA
Trigger: TGCTGCGGCGCTGTCTTTGCAGCATTGCCATGTCAC...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACGATTGCCCACACAAATaGTTTCTTTCAGGGACCAGG +
Preference number: 2 (lower is better)
Translates to: APWRSELCECSGPEPHTNDCPHK*FLSGTR
Trigger: CCTGGTCCCTGAAAGAAAGCATTTGTGTGGGCAATC...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTCATACTAGTGCCCCTTaGTCAGAGGAGGTCTCCGCG +
Preference number: 2 (lower is better)
Translates to: NGKCHDTDREWPPCPPISHTSAP*SEEVSA
Trigger: CGCGGAGACCTCCTCTGACCAAGGGGCACTAGTATG...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATACCCATGGCCAGATCTaGGCACAGGGGAGCCACGCC +
Preference number: 2 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNTHGQI*AQGSHA
Trigger: GGCGTGGCTCCCCTGTGCCCAGATCTGGCCATGGGT...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGAAGGGAGTGGGTTTCTaGATGACTAGAGCAGACACC +
Preference number: 2 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMKGVGF*MTRADT
Trigger: GGTGTCTGCTCTAGTCATCCAGAAACCCACTCCCTT...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGTGGCCAGATGGGTTCTaGAATGAGGCTTCTGCTACT +
Preference number: 2 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMWPDGF*NEASAT
Trigger: AGTAGCAGAAGCCTCATTCCAGAACCCATCTGGCCA...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGATGCTGCTGCTTCTCTaGCCAGATGGGTTCTGGAAT +
Preference number: 2 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMMLLLL*PDGFWN
Trigger: ATTCCAGAACCCATCTGGCCAGAGAAGCAGCAGCAT...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAAACAATAACATCCACATaGCGGCAGAGCCAAGACGCC +
Preference number: 2 (lower is better)
Translates to: LRATHCRRAASLKSVPRQTITST*RQSQDA
Trigger: GGCGTCTTGGCTCTGCCGTCATGTGGATGTTATTGT...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTGGAACTACAGATACATaGCTCACTGCGGCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: NGKCHDTDREWPPCPPISGTTDT*LTAARP
Trigger: TGGCCTGGCCGCAGTGAGGCATGTATCTGTAGTTCC...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGGTGGCCAAGAGAAGGTaGAGCCGAGAATCAGATATT +
Preference number: 2 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMVAKRR*SRESDI
Trigger: AATATCTGATTCTCGGCTGCACCTTCTCTTGGCCAC...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAGCTCTGCGTGTTACCTaGCCCAGCTTCCCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTALRVT*PSFPSS
Trigger: TGAAGAAGGGAAGCTGGGGCAGGTAACACGCAGAGC...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATCGGCCACCGAAGATGTaGCACCTCATGAAGCGAGGG +
Preference number: 2 (lower is better)
Translates to: WWFKAPATQANDVNGKCHRPPKM*HLMKRG
Trigger: CCCTCGCTTCATGAGGTGGCACATCTTCGGTGGCCG...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGTGTGGACACCAGGCTaGCAAGAACCATGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: WWFKAPATQANDVNGKCHVWTPG*QEPCPA
Trigger: GGCAGGGCATGGTTCTTGGCAGCCTGGTGTCCACAC...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAACGGTGACATGGCAATaGTGCAAAGACAGCGCCGCA +
Preference number: 2 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTTVTWQ*CKDSAA
Trigger: TGCGGCGCTGTCTTTGCAGCATTGCCATGTCACCGT...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACGCCAGCCCTGGGTGGTaGAAGGGAACTGAAGCAAGG +
Preference number: 2 (lower is better)
Translates to: WFKAPATQANDVNGKCHDASPGW*KGTEAR
Trigger: CCTTGCTTCAGTTCCCTTCCACCACCCAGGGCTGGC...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATCATACTAGTGCCCCTTaGTCAGAGGAGGTCTCCGCG +
Preference number: 2 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDHTSAP*SEEVSA
Trigger: CGCGGAGACCTCCTCTGACCAAGGGGCACTAGTATG...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCCCAGTGTGCACGTGCTaGCCCGGTCAGGGCCAGGGT +
Preference number: 2 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPPVCTC*PGQGQG
Trigger: ACCCTGGCCCTGACCGGGCCAGCACGTGCACACTGG...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATACCATGCCCTGCCGCTaGAGACAGGAGACAGGCACC +
Preference number: 2 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNTMPCR*RQETGT
Trigger: GGTGCCTGTCTCCTGTCTCCAGCGGCAGGGCATGGT...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACAGATGTGCCACCTCATaGAGCGAGGGCACTGCTTCC +
Preference number: 2 (lower is better)
Translates to: WFKAPATQANDVNGKCHDRCATS*SEGTAS
Trigger: GGAAGCAGTGCCCTCGCTTCATGAGGTGGCACATCT...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACGGGGTTGAATCCTCCTaGTACAACCCGGCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: WFKAPATQANDVNGKCHDGVESS*YNPAQG
Trigger: TCCTTGGGCCGGGTTGTATCAGGAGGATTCAACCCC...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTGCCAACAGTGATAAATaGCAGAGAGGGTGTCTCGGC +
Preference number: 2 (lower is better)
Translates to: NGKCHDTDREWPPCPPISANSDK*QRGCLG
Trigger: GCCGAGACACCCTCTCTGGCATTTATCACTGTTGGC...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTAAGCTGAAGAGAAGGTaGCCCTGGATCACCAATGGC +
Preference number: 2 (lower is better)
Translates to: NGKCHDTDREWPPCPPISKLKRR*PWITNG
Trigger: GCCATTGGTGATCCAGGGGCACCTTCTCTTCAGCTT...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAAGACTGGTGCCTTGGGTaGCACTCTATACTCATCACA +
Preference number: 2 (lower is better)
Translates to: LRATHCRRAASLKSVPRQDWCLG*HSILIT
Trigger: TGTGATGAGTATAGAGTGCCACCCAAGGCACCAGTC...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACACAGACCGTTCCACGTaGCGGCTCTGCGTGTTACCT +
Preference number: 2 (lower is better)
Translates to: WFKAPATQANDVNGKCHDTDRST*RLCVLP
Trigger: AGGTAACACGCAGAGCCGCCACGTGGAACGGTCTGT...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACACAGAATTATTGGGTTaGCCACAGTGGAATCAGAAC +
Preference number: 2 (lower is better)
Translates to: APWRSELCECSGPEPHTNTELLG*PQWNQN
Trigger: GTTCTGATTCCACTGTGGCCAACCCAATAATTCTGT...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACGTCTACATTTCATGTTaGGATTGCCCACACAAATGC +
Preference number: 2 (lower is better)
Translates to: APWRSELCECSGPEPHTNVYISC*DCPHKC
Trigger: GCATTTGTGTGGGCAATCCCAACATGAAATGTAGAC...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 90 bp ATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTaGGGTGGCACTCTATACTCATCACACCGGCCAACAGTGATAAAT +
Preference number: 2 (lower is better)
Translates to: MTAEPRRPSACVTGA*GGTLYSSHRPTVIN
Trigger: ATTTATCACTGTTGGCCGGTGTGATGAGTATAGAGTGCCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 90 bp GGGCTTCAGAAGGGAGTGGGTTTCTGGATGACTAGAGCAGACACCTaGAGTGTTATGCAGCGGAAGACGCCCAGTCAAGCTGAAGAGAAG +
Preference number: 2 (lower is better)
Translates to: GLQKGVGFWMTRADT*SVMQRKTPSQAEEK
Trigger: CTTCTCTTCAGCTTGACTGGGCGTCTTCCGCTGCATAACACTCAAGGTGTCTGCTCTAGTCATCCAGAAACCCACTCCCTTCTGAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAATACAACAAGCTTCCCTaGTGGTGTCCACAGCTTTAC +
Preference number: 2 (lower is better)
Translates to: LRATHCRRAASLKSVPRQYNKLP*WCPQLY
Trigger: GTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTA...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTAGCTTGTGTGACTGGTaGCTTGGGTGGCACTCTATA +
Preference number: 2 (lower is better)
Translates to: NGKCHDTDREWPPCPPISSLCDW*LGWHSI
Trigger: TATAGAGTGCCACCCAAGGCACCAGTCACACAAGCT...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCCGAGGGGGACAGGAATaGACCGTGTGGACACCAGGC +
Preference number: 2 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPRGGQE*TVWTPG
Trigger: GCCTGGTGTCCACACGGTGCATTCCTGTCCCCCTCG...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACACGGTGACATGGCAATaGTGCAAAGACAGCGCCGCA +
Preference number: 2 (lower is better)
Translates to: WFKAPATQANDVNGKCHDTVTWQ*CKDSAA
Trigger: TGCGGCGCTGTCTTTGCAGCATTGCCATGTCACCGT...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 90 bp GAGATGTTGAGCAAAATCCAAACAGAAGGAACTGAGAGCAACTCATaGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAAGAGGG +
Preference number: 2 (lower is better)
Translates to: EMLSKIQTEGTESNS*QEGCQPQECPKARG
Trigger: CCCTCTTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAGTTCCTTCTGTTTGGATTTTGCTCAACATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 90 bp CCCCACCTCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTaGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGA +
Preference number: 2 (lower is better)
Translates to: PHLLFPYPSSDRIIG*ATVESEQETLTPTG
Trigger: TCCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGAGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACCAGACGAGGGTCAAATaGCAAGGAAACAGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: WFKAPATQANDVNGKCHDQTRVK*QGNRSR
Trigger: CCTGGACCTGTTTCCTTGTCATTTGACCCTCGTCTG...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCGCCCATCAGCTTGTGTaGCTGGTGCCTTGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPAHQLV*LVPWVA
Trigger: TGCCACCCAAGGCACCAGTCACACAAGCTGATGGGC...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGCTAGAGCAGACACCTTaGGTGTTATGCAGCGGAAGA +
Preference number: 2 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLLEQTP*VLCSGR
Trigger: TCTTCCGCTGCATAACACTCAAGGTGTCTGCTCTAG...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACGCCAACAGTGATAAATaGCAGAGAGGGTGTCTCGGC +
Preference number: 2 (lower is better)
Translates to: WFKAPATQANDVNGKCHDANSDK*QRGCLG
Trigger: GCCGAGACACCCTCTCTGGCATTTATCACTGTTGGC...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACCATGGCCAGCAATaGACACTCTCAAAGGGCAAG +
Preference number: 2 (lower is better)
Translates to: WWFKAPATQANDVNGKCHDHGQQ*TLSKGK
Trigger: CTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTC...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATAAAGCCCCTGGACCCTaGAGGTGGCTTATAGGAAAG +
Preference number: 2 (lower is better)
Translates to: WWFKAPATQANDVNGKCHKAPGP*RWLIGK
Trigger: CTTTCCTATAAGCCACCTCCAGGGTCCAGGGGCTTT...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATATCAGCTTGTGTGACTaGTGCCTTGGGTGGCACTCT +
Preference number: 2 (lower is better)
Translates to: WWFKAPATQANDVNGKCHISLCD*CLGWHS
Trigger: AGAGTGCCACCCAAGGCACCAGTCACACAAGCTGAT...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATCAGGAATGCACCGTGTaGACACCAGGCTGCCAAGAA +
Preference number: 2 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNQECTV*TPGCQE
Trigger: TTCTTGGCAGCCTGGTGTCCACACGGTGCATTCCTG...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGAAGGGAGTGGGTTTCTaGATGACTAGAGCAGACACC +
Preference number: 2 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLKGVGF*MTRADT
Trigger: GGTGTCTGCTCTAGTCATCCAGAAACCCACTCCCTT...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 90 bp TTGCTCCCCACCTCCTATTCCCTTACCCCTCCTCGGACAGAATTATaGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAA +
Preference number: 2 (lower is better)
Translates to: LLPTSYSLTPPRTEL*GWPQWNQNRKLSLQ
Trigger: TTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGAGGTGGGGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTTGCCAGAATAAACCTTaGAGCCCCAAACTTCCAAGA +
Preference number: 2 (lower is better)
Translates to: NGKCHDTDREWPPCPPISCQNKP*SPKLPR
Trigger: TCTTGGAAGTTTGGGGCTTCAAGGTTTATTCTGGCA...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATAGGGGTTGAATCCTCCTaGTACAACCCGGCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: SLWKLETNRPARTFTSKIGVESS*YNPAQG
Trigger: TCCTTGGGCCGGGTTGTATCAGGAGGATTCAACCCC...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTAGATACATGCCTCACTaGGGCCAGGCCACAGGGCAC +
Preference number: 2 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNARYMPH*GQATGH
Trigger: GTGCCCTGTGGCCTGGCCGCAGTGAGGCATGTATCT...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATACCTGGACCCTGGAGGTaGCTTATAGGAAAGCCAGCC +
Preference number: 2 (lower is better)
Translates to: SLWKLETNRPARTFTSKIPGPWR*LIGKPA
Trigger: GGCTGGCTTTCCTATAAGCCACCTCCAGGGTCCAGG...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACGACTGGTGCCTTGGGTaGCACTCTATACTCATCACA +
Preference number: 2 (lower is better)
Translates to: WFKAPATQANDVNGKCHDDWCLG*HSILIT
Trigger: TGTGATGAGTATAGAGTGCCACCCAAGGCACCAGTC...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTGTCTTTCTGCTCACCTaGAGAGCTAGAAGATTGCAA +
Preference number: 2 (lower is better)
Translates to: NGKCHDTDREWPPCPPISVFLLT*RARRLQ
Trigger: TTGCAATCTTCTAGCTCTCCAGGTGAGCAGAAAGAC...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACCTCACAGCAGAAAAGTaGTTCGCAGTCTGTCTTAGC +
Preference number: 2 (lower is better)
Translates to: WFKAPATQANDVNGKCHDLTAEK*FAVCLS
Trigger: GCTAAGACAGACTGCGAATCACTTTTCTGCTGTGAG...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACAATTCACGTGTAACTTaGCCCATGGTTTCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: WFKAPATQANDVNGKCHDNSRVT*PMVSGL
Trigger: GAGCCCAGAAACCATGGGTCAAGTTACACGTGAATT...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACGTGGCCAAGAGAAGGTaGAGCCGAGAATCAGATATT +
Preference number: 2 (lower is better)
Translates to: WFKAPATQANDVNGKCHDVAKRR*SRESDI
Trigger: AATATCTGATTCTCGGCTGCACCTTCTCTTGGCCAC...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACAGGGAGCCTGTTGGCTaGTTTTCTTATCACCTTTGG +
Preference number: 2 (lower is better)
Translates to: WFKAPATQANDVNGKCHDREPVG*FSYHLW
Trigger: CCAAAGGTGATAAGAAAAGCAGCCAACAGGCTCCCT...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCGTGACATGGCAATGCTaGAAAGACAGCGCCGCAGCA +
Preference number: 2 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPVTWQC*KDSAAA
Trigger: TGCTGCGGCGCTGTCTTTGCAGCATTGCCATGTCAC...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTAATCACTCAAGGCTGTaGAGAAAGTACCAGATTCAG +
Preference number: 2 (lower is better)
Translates to: NGKCHDTDREWPPCPPISNHSRL*RKYQIQ
Trigger: CTGAATCTGGTACTTTCTGCACAGCCTTGAGTGATT...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCAACGGACGTGCGACATaGCAACCCACAGGAAGTCTC +
Preference number: 2 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPNGRAT*QPTGSL
Trigger: GAGACTTCCTGTGGGTTGCCATGTCGCACGTCCGTT...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATACAGGAATGCACCGTGTaGACACCAGGCTGCCAAGAA +
Preference number: 2 (lower is better)
Translates to: SLWKLETNRPARTFTSKIQECTV*TPGCQE
Trigger: TTCTTGGCAGCCTGGTGTCCACACGGTGCATTCCTG...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTCTCACAGCAGAAAAGTaGTTCGCAGTCTGTCTTAGC +
Preference number: 2 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTLTAEK*FAVCLS
Trigger: GCTAAGACAGACTGCGAATCACTTTTCTGCTGTGAG...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCCGGCCACTAGTGAAATaGAAAGAGGCCAGTGTGCAC +
Preference number: 2 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPRPLVK*KEASVH
Trigger: GTGCACACTGGCCTCTTTTCATTTCACTAGTGGCCG...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATCTCCAAAGGGAGGACTaGAACTTCAAATTTAGTGAC +
Preference number: 2 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDLQRED*NFKFSD
Trigger: GTCACTAAATTTGAAGTTCCAGTCCTCCCTTTGGAG...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTGAGAGAGAAAGCCCCTaGACCCTGGAGGTGGCTTAT +
Preference number: 2 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNAERESP*TLEVAY
Trigger: ATAAGCCACCTCCAGGGTCCAGGGGCTTTCTCTCTC...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCATCAGCTTGTGTGACTaGTGCCTTGGGTGGCACTCT +
Preference number: 2 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPISLCD*CLGWHS
Trigger: AGAGTGCCACCCAAGGCACCAGTCACACAAGCTGAT...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGACACAACCACAACAATaGTTACTGGCCTTCAAAAGC +
Preference number: 2 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLTQPQQ*LLAFKS
Trigger: GCTTTTGAAGGCCAGTAACCATTGTTGTGGTTGTGT...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATAGGCAAAACAATGCAGTaGCTCCGAGGTGTTCTTGCC +
Preference number: 2 (lower is better)
Translates to: SLWKLETNRPARTFTSKIGKTMQ*LRGVLA
Trigger: GGCAAGAACACCTCGGAGCCACTGCATTGTTTTGCC...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATACGCAGGCCAATGATGTaGATGGGAAGTGTCATGACA +
Preference number: 2 (lower is better)
Translates to: SLWKLETNRPARTFTSKIRRPMM*MGSVMT
Trigger: TGTCATGACACTTCCCATTCACATCATTGGCCTGCG...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCCCTGGACCCTGGAGGTaGCTTATAGGAAAGCCAGCC +
Preference number: 2 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFPGPWR*LIGKPA
Trigger: GGCTGGCTTTCCTATAAGCCACCTCCAGGGTCCAGG...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATCACAACAATGGTTACTaGCCTTCAAAAGCCGTTACA +
Preference number: 2 (lower is better)
Translates to: WWFKAPATQANDVNGKCHHNNGY*PSKAVT
Trigger: TGTAACGGCTTTTGAAGGCCAGTAACCATTGTTGTG...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 90 bp GAAGAGAAGGTGCCCCTGGATCACCAATGGCTTTCAGGCTTTTATTaGGATATTTGGTCTTTCTGCTCACCTGGAGAGCTAGAAGATTGC +
Preference number: 2 (lower is better)
Translates to: EEKVPLDHQWLSGFY*DIWSFCSPGELEDC
Trigger: GCAATCTTCTAGCTCTCCAGGTGAGCAGAAAGACCAAATATCCAAATAAAAGCCTGAAAGCCATTGGTGATCCAGGGGCACCTTCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCAATTCACGTGTAACTTaGCCCATGGTTTCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPNSRVT*PMVSGL
Trigger: GAGCCCAGAAACCATGGGTCAAGTTACACGTGAATT...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATTCCTTTTCCCTCCAATaGCCCAAACAGATGTTCATT +
Preference number: 2 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNSFSLQ*PKQMFI
Trigger: AATGAACATCTGTTTGGGGCATTGGAGGGAAAAGGA...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATCTCCAAAGGGAGGACTaGAACTTCAAATTTAGTGAC +
Preference number: 2 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNLQRED*NFKFSD
Trigger: GTCACTAAATTTGAAGTTCCAGTCCTCCCTTTGGAG...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCAAAGCCAGCCCTGGGTaGTGGAAGGGAACTGAAGCA +
Preference number: 2 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFKASPG*WKGTEA
Trigger: TGCTTCAGTTCCCTTCCACCACCCAGGGCTGGCTTT...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCGGGGCTACGGTGACATaGCAATGCTGCAAAGACAGC +
Preference number: 2 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFGATVT*QCCKDS
Trigger: GCTGTCTTTGCAGCATTGCCATGTCACCGTAGCCCC...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACATTTTATTTGGATATTTaGTCTTTCTGCTCACCTGGA +
Preference number: 2 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTFYLDI*SFCSPG
Trigger: TCCAGGTGAGCAGAAAGACCAAATATCCAAATAAAA...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCACAATAACATCCACATaGCGGCAGAGCCAAGACGCC +
Preference number: 2 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFTITST*RQSQDA
Trigger: GGCGTCTTGGCTCTGCCGTCATGTGGATGTTATTGT...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCAAAGCCCCTGGACCCTaGAGGTGGCTTATAGGAAAG +
Preference number: 2 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLAKAPGP*RWLIGK
Trigger: CTTTCCTATAAGCCACCTCCAGGGTCCAGGGGCTTT...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCCCGAGAATCAGATATTaGCTTCAGGGTCCTTTCCTT +
Preference number: 2 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPPRIRY*LQGPFL
Trigger: AAGGAAAGGACCCTGAAGCCAATATCTGATTCTCGG...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR GCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATAGATATTTGGTCTTTCTaGTCACCTGGAGAGCTAGAA +
Preference number: 2 (lower is better)
Translates to: SLWKLETNRPARTFTSKIDIWSF*SPGELE
Trigger: TTCTAGCTCTCCAGGTGAGCAGAAAGACCAAATATC...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATACACAACAATGGTTACTaGCCTTCAAAAGCCGTTACA +
Preference number: 2 (lower is better)
Translates to: SLWKLETNRPARTFTSKIHNNGY*PSKAVT
Trigger: TGTAACGGCTTTTGAAGGCCAGTAACCATTGTTGTG...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCTACAACAAGCTTCCCTaGTGGTGTCCACAGCTTTAC +
Preference number: 2 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLAYNKLP*WCPQLY
Trigger: GTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTA...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR TCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCAGAAACTGGAGATGTTaGGCAAAATCCAAACAGAAG +
Preference number: 2 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFRNWRC*AKSKQK
Trigger: CTTCTGTTTGGATTTTGCTCAACATCTCCAGTTTCT...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp GAGCCGCACACTAACGCGGCGTGCAGCAGGTGTGGCTaGGTGTGCACAGCTGGCGTCCAGCGACAGCCATGC +
Preference number: 3 (lower is better)
Translates to: EPHTNAACSRCG*VCTAGVQRQPC
Trigger: GCATGGCTGTCGCTGGACGCCAGCTGTGCACACCCAGCCACACCTGCTGCACGCCGCGTTAGTGTGCGGCTC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp GCAAGCGGGACAGACCGGCGGACAGACCGTTCCACGTaGCGGCTCTGCGTGTTACCTGCCCCAGCTTCCCTT +
Preference number: 3 (lower is better)
Translates to: ASGTDRRTDRST*RLCVLPAPASL
Trigger: AAGGGAAGCTGGGGCAGGTAACACGCAGAGCCGCCACGTGGAACGGTCTGTCCGCCGGTCTGTCCCGCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 72 bp CGAGGGGGACAGGAATGCACCGTGTGGACACCAGGCTaGCAAGAACCATGCCCTGCCGCTGGAGACAGGAGA +
Preference number: 3 (lower is better)
Translates to: RGGQECTVWTPG*QEPCPAAGDRR
Trigger: TCTCCTGTCTCCAGCGGCAGGGCATGGTTCTTGGCAGCCTGGTGTCCACACGGTGCATTCCTGTCCCCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 72 bp CAAAGCCAAGAGGAGGCTCCCTGGAGAAGCGAGCTTTaGGAATGCTCAGGCCCGGAGCCGCACACTAACGCG +
Preference number: 3 (lower is better)
Translates to: QSQEEAPWRSEL*ECSGPEPHTNA
Trigger: CGCGTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGCCTCCTCTTGGCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 72 bp GCTGGCCCGGTCAGGGCCAGGGTGGCCAAGAGAAGGTaGAGCCGAGAATCAGATATTGGCTTCAGGGTCCTT +
Preference number: 3 (lower is better)
Translates to: AGPVRARVAKRR*SRESDIGFRVL
Trigger: AAGGACCCTGAAGCCAATATCTGATTCTCGGCTGCACCTTCTCTTGGCCACCCTGGCCCTGACCGGGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 72 bp ACAGACCGGCGGACAGACCGTTCCACGTGGCGGCTCTaGGTGTTACCTGCCCCAGCTTCCCTTCTTCACAAA +
Preference number: 3 (lower is better)
Translates to: TDRRTDRSTWRL*VLPAPASLLHK
Trigger: TTTGTGAAGAAGGGAAGCTGGGGCAGGTAACACGCAGAGCCGCCACGTGGAACGGTCTGTCCGCCGGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp AGGGGCTTCGGAGAGAGAGAGAAAGCCCCTGGACCCTaGAGGTGGCTTATAGGAAAGCCAGCCCTGGGTGGT +
Preference number: 3 (lower is better)
Translates to: RGFGEREKAPGP*RWLIGKPALGG
Trigger: ACCACCCAGGGCTGGCTTTCCTATAAGCCACCTCCAGGGTCCAGGGGCTTTCTCTCTCTCTCCGAAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp CAGGTCCAGGGGCTTCGGAGAGAGAGAGAAAGCCCCTaGACCCTGGAGGTGGCTTATAGGAAAGCCAGCCCT +
Preference number: 3 (lower is better)
Translates to: QVQGLRRERESP*TLEVAYRKASP
Trigger: AGGGCTGGCTTTCCTATAAGCCACCTCCAGGGTCCAGGGGCTTTCTCTCTCTCTCCGAAGCCCCTGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp CCCTGGGCTCTTTTCCAAAGCCAAGAGGAGGCTCCCTaGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAG +
Preference number: 3 (lower is better)
Translates to: PWALFQSQEEAP*RSELCECSGPE
Trigger: CTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGCCTCCTCTTGGCTTTGGAAAAGAGCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp GTCCATGGGCAGACGCTGAACGCTGGCAAAACCGGGTaGCCGTTCTTGCACTACTCGGGTTCTGACTGCAGG +
Preference number: 3 (lower is better)
Translates to: VHGQTLNAGKTG*PFLHYSGSDCR
Trigger: CCTGCAGTCAGAACCCGAGTAGTGCAAGAACGGCCACCCGGTTTTGCCAGCGTTCAGCGTCTGCCCATGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 72 bp CAGAGGAGGTCTCCGCGGGCACAGACGAGGGTCAAATaGCAAGGAAACAGGTCCAGGGGCTTCGGAGAGAGA +
Preference number: 3 (lower is better)
Translates to: QRRSPRAQTRVK*QGNRSRGFGER
Trigger: TCTCTCTCCGAAGCCCCTGGACCTGTTTCCTTGTCATTTGACCCTCGTCTGTGCCCGCGGAGACCTCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 72 bp CAAAACCGGGTGGCCGTTCTTGCACTACTCGGGTTCTaGCTGCAGGAGGGGCAGAGGGTGGTCGATGTCCTA +
Preference number: 3 (lower is better)
Translates to: QNRVAVLALLGF*LQEGQRVVDVL
Trigger: TAGGACATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGGCCACCCGGTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 72 bp GGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTaGCTTGGGTGGCACTCTATACTCATCACACCGGCC +
Preference number: 3 (lower is better)
Translates to: GRAKTPISLCDW*LGWHSILITPA
Trigger: GGCCGGTGTGATGAGTATAGAGTGCCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 72 bp AGTGTACACCCCATGCACGGCCATCCCCCAGGATGCTaGTGCTTCTCTGGCCAGATGGGTTCTGGAATGAGG +
Preference number: 3 (lower is better)
Translates to: SVHPMHGHPPGC*CFSGQMGSGMR
Trigger: CCTCATTCCAGAACCCATCTGGCCAGAGAAGCAGCAGCATCCTGGGGGATGGCCGTGCATGGGGTGTACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp ATGTGCCTTATGGGTCCATGGGCAGACGCTGAACGCTaGCAAAACCGGGTGGCCGTTCTTGCACTACTCGGG +
Preference number: 3 (lower is better)
Translates to: MCLMGPWADAER*QNRVAVLALLG
Trigger: CCCGAGTAGTGCAAGAACGGCCACCCGGTTTTGCCAGCGTTCAGCGTCTGCCCATGGACCCATAAGGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp AAGAGACCCCCAACGCTAATGTGCCTTATGGGTCCATaGGCAGACGCTGAACGCTGGCAAAACCGGGTGGCC +
Preference number: 3 (lower is better)
Translates to: KRPPTLMCLMGP*ADAERWQNRVA
Trigger: GGCCACCCGGTTTTGCCAGCGTTCAGCGTCTGCCCATGGACCCATAAGGCACATTAGCGTTGGGGGTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CAA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTGCCGAGAATCAGATATaGGCTTCAGGGTCCTTTCCT +
Preference number: 3 (lower is better)
Translates to: PRLATEARQAGQTGGQTVAENQI*ASGSFP
Trigger: AGGAAAGGACCCTGAAGCCAATATCTGATTCTCGGC...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CAA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACGCCGAGAATCAGATATaGGCTTCAGGGTCCTTTCCT +
Preference number: 3 (lower is better)
Translates to: APWRSELCECSGPEPHTNAENQI*ASGSFP
Trigger: AGGAAAGGACCCTGAAGCCAATATCTGATTCTCGGC...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 72 bp GACCAGGCCAACGGCCACCGAAGATGTGCCACCTCATaGAGCGAGGGCACTGCTTCCTATCTCAGGCCTTTT +
Preference number: 3 (lower is better)
Translates to: DQANGHRRCATS*SEGTASYLRPF
Trigger: AAAAGGCCTGAGATAGGAAGCAGTGCCCTCGCTTCATGAGGTGGCACATCTTCGGTGGCCGTTGGCCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 72 bp ACCAAAGCTCGACCAGGCCAACGGCCACCGAAGATGTaGCACCTCATGAAGCGAGGGCACTGCTTCCTATCT +
Preference number: 3 (lower is better)
Translates to: TKARPGQRPPKM*HLMKRGHCFLS
Trigger: AGATAGGAAGCAGTGCCCTCGCTTCATGAGGTGGCACATCTTCGGTGGCCGTTGGCCTGGTCGAGCTTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp GACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTaGTGCCTTGGGTGGCACTCTATACTCATCACACCG +
Preference number: 3 (lower is better)
Translates to: DGRAKTPISLCD*CLGWHSILITP
Trigger: CGGTGTGATGAGTATAGAGTGCCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp CCCAAACTTCCAAGAGTGAAGGGGGCTACGGTGACATaGCAATGCTGCAAAGACAGCGCCGCAGCACTGGAG +
Preference number: 3 (lower is better)
Translates to: PKLPRVKGATVT*QCCKDSAAALE
Trigger: CTCCAGTGCTGCGGCGCTGTCTTTGCAGCATTGCCATGTCACCGTAGCCCCCTTCACTCTTGGAAGTTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 72 bp GGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTaGATGGGAAGTGTCATGACACAGACCGCGAGTGGC +
Preference number: 3 (lower is better)
Translates to: GGSKPQQRRPMM*MGSVMTQTASG
Trigger: GCCACTCGCGGTCTGTGTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 72 bp AACGCTAATGTGCCTTATGGGTCCATGGGCAGACGCTaGACGCTGGCAAAACCGGGTGGCCGTTCTTGCACT +
Preference number: 3 (lower is better)
Translates to: NANVPYGSMGRR*TLAKPGGRSCT
Trigger: AGTGCAAGAACGGCCACCCGGTTTTGCCAGCGTTCAGCGTCTGCCCATGGACCCATAAGGCACATTAGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 72 bp TGTGAGGCTGCTGAAAAGAGACCCCCAACGCTAATGTaGCTTATGGGTCCATGGGCAGACGCTGAACGCTGG +
Preference number: 3 (lower is better)
Translates to: CEAAEKRPPTLM*LMGPWADAERW
Trigger: CCAGCGTTCAGCGTCTGCCCATGGACCCATAAGGCACATTAGCGTTGGGGGTCTCTTTTCAGCAGCCTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp ACCCTGGAGGTGGCTTATAGGAAAGCCAGCCCTGGGTaGTGGAAGGGAACTGAAGCAAGGAATGGCTGCAGA +
Preference number: 3 (lower is better)
Translates to: TLEVAYRKASPG*WKGTEARNGCR
Trigger: TCTGCAGCCATTCCTTGCTTCAGTTCCCTTCCACCACCCAGGGCTGGCTTTCCTATAAGCCACCTCCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp GATGTGAATGGGAAGTGTCATGACACAGACCGCGAGTaGCCACCGTGTCCCCCAATATCTCCCCTTCAGGTG +
Preference number: 3 (lower is better)
Translates to: DVNGKCHDTDRE*PPCPPISPLQV
Trigger: CACCTGAAGGGGAGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATTCACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CAA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAATCCTTAAGCCAAGACTaGCAACAGAAGCCCGGCAAG +
Preference number: 3 (lower is better)
Translates to: LRATHCRRAASLKSVPRQSLSQD*QQKPGK
Trigger: CTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 72 bp ACAGAAGGAACTGAGAGCAACTCATTGCAGGAGGGCTaGCAGCCTCAAGAGTGTCCCAAGGCAAGAGGGATG +
Preference number: 3 (lower is better)
Translates to: TEGTESNSLQEG*QPQECPKARGM
Trigger: CATCCCTCTTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAGTTCCTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp GCTGCCAGCCTCAAGAGTGTCCCAAGGCAAGAGGGATaGAAACCGCGAGCCAGTGTGCTTCTAAAGTATGCA +
Preference number: 3 (lower is better)
Translates to: AASLKSVPRQEG*KPRASVLLKYA
Trigger: TGCATACTTTAGAAGCACACTGGCTCGCGGTTTCCATCCCTCTTGCCTTGGGACACTCTTGAGGCTGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp CGGCCCAAGGAGGGGCTTCAGAAGGGAGTGGGTTTCTaGATGACTAGAGCAGACACCTTGAGTGTTATGCAG +
Preference number: 3 (lower is better)
Translates to: RPKEGLQKGVGF*MTRADTLSVMQ
Trigger: CTGCATAACACTCAAGGTGTCTGCTCTAGTCATCCAGAAACCCACTCCCTTCTGAAGCCCCTCCTTGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CAA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTTGTGTGACTGGTGCCTaGGGTGGCACTCTATACTCA +
Preference number: 3 (lower is better)
Translates to: NGKCHDTDREWPPCPPISCVTGA*GGTLYS
Trigger: TGAGTATAGAGTGCCACCCAAGGCACCAGTCACACA...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 72 bp ACCGCATCAGGCACCATCACCCTCACAGCAGAAAAGTaGTTCGCAGTCTGTCTTAGCTCTGGGGCGCAGAAT +
Preference number: 3 (lower is better)
Translates to: TASGTITLTAEK*FAVCLSSGAQN
Trigger: ATTCTGCGCCCCAGAGCTAAGACAGACTGCGAATCACTTTTCTGCTGTGAGGGTGATGGTGCCTGATGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 72 bp GCAGTGGCTCCGAGGTGTTCTTGCCAGAATAAACCTTaGAGCCCCAAACTTCCAAGAGTGAAGGGGGCTACG +
Preference number: 3 (lower is better)
Translates to: AVAPRCSCQNKP*SPKLPRVKGAT
Trigger: CGTAGCCCCCTTCACTCTTGGAAGTTTGGGGCTTCAAGGTTTATTCTGGCAAGAACACCTCGGAGCCACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CAA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGTGGAGAGCTAGAAGATaGCAAATCTCTGGGATGTTT +
Preference number: 3 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMWRARR*QISGMF
Trigger: AAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCA...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 72 bp GCAAAATCCAAACAGAAGGAACTGAGAGCAACTCATTaGAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGG +
Preference number: 3 (lower is better)
Translates to: AKSKQKELRATH*RRAASLKSVPR
Trigger: CCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAGTTCCTTCTGTTTGGATTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CAA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATTGTGTGACTGGTGCCTaGGGTGGCACTCTATACTCA +
Preference number: 3 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNCVTGA*GGTLYS
Trigger: TGAGTATAGAGTGCCACCCAAGGCACCAGTCACACA...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CAA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGCTTTTCTTATCACCTTaGGCAACCACCCTCACCTGT +
Preference number: 3 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLLFLSP*ATTLTC
Trigger: ACAGGTGAGGGTGGTTGCCAAAGGTGATAAGAAAAG...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CAA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACACTAGAGCAGACACCTaGAGTGTTATGCAGCGGAAG +
Preference number: 3 (lower is better)
Translates to: WFKAPATQANDVNGKCHDTRADT*SVMQRK
Trigger: CTTCCGCTGCATAACACTCAAGGTGTCTGCTCTAGT...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp ACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTaGAATCAGAACAGGAAACTCTCACTCCAACAGGAG +
Preference number: 3 (lower is better)
Translates to: TPPRTELLGWPQ*NQNRKLSLQQE
Trigger: CTCCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp GAGGCTTCTGCTACTGCTCCATATTCACCTTCAATCTaGCCTGGCCACTCCCATGGCATCCGTATTACTGAA +
Preference number: 3 (lower is better)
Translates to: EASATAPYSPSI*PGHSHGIRITE
Trigger: TTCAGTAATACGGATGCCATGGGAGTGGCCAGGCCAGATTGAAGGTGAATATGGAGCAGTAGCAGAAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CAA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTAAGACGCCCATCAGCTaGTGTGACTGGTGCCTTGGG +
Preference number: 3 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNAKTPIS*CDWCLG
Trigger: CCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTT...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 72 bp GATGCTGCTGCTTCTCTGGCCAGATGGGTTCTGGAATaGGGCTTCTGCTACTGCTCCATATTCACCTTCAAT +
Preference number: 3 (lower is better)
Translates to: DAAASLARWVLE*GFCYCSIFTFN
Trigger: ATTGAAGGTGAATATGGAGCAGTAGCAGAAGCCTCATTCCAGAACCCATCTGGCCAGAGAAGCAGCAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CAA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAGAGAAACTGGAGATGTaGAGCAAAATCCAAACAGAA +
Preference number: 3 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTEKLEM*SKIQTE
Trigger: TTCTGTTTGGATTTTGCTCAACATCTCCAGTTTCTC...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CAA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACAGAATTATTGGGTaGGCCACAGTGGAATCAGAA +
Preference number: 3 (lower is better)
Translates to: WWFKAPATQANDVNGKCHDRIIG*ATVESE
Trigger: TTCTGATTCCACTGTGGCCAACCCAATAATTCTGTC...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 72 bp GCTTCCCTTCTTCACAAAACAAATTCACGTGTAACTTaGCCCATGGTTTCTGGGCTCCGGTCCAGTAGTCAG +
Preference number: 3 (lower is better)
Translates to: ASLLHKTNSRVT*PMVSGLRSSSQ
Trigger: CTGACTACTGGACCGGAGCCCAGAAACCATGGGTCAAGTTACACGTGAATTTGTTTTGTGAAGAAGGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR GCA 72 bp GTCCGTATTCACGCTGTCTACATTTCATGTTGGGATTaGCCACACAAATGCTTTCTTTCAGGGACCAGGCAG +
Preference number: 3 (lower is better)
Translates to: VRIHAVYISCWD*PHKCFLSGTRQ
Trigger: CTGCCTGGTCCCTGAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATACGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp TATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTaGCCACAGTGGAATCAGAACAGGAAACTCTCACTC +
Preference number: 3 (lower is better)
Translates to: YSLTPPRTELLG*PQWNQNRKLSL
Trigger: GAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp CCTCCTGTCCGTATTCACGCTGTCTACATTTCATGTTaGGATTGCCCACACAAATGCTTTCTTTCAGGGACC +
Preference number: 3 (lower is better)
Translates to: PPVRIHAVYISC*DCPHKCFLSGT
Trigger: GGTCCCTGAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATACGGACAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CAA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATATCTGCAGTAAGTTTTaGGCAAAACAATGCAGTGGC +
Preference number: 3 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNICSKF*AKQCSG
Trigger: GCCACTGCATTGTTTTGCCAAAAACTTACTGCAGAT...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 72 bp TTTGTTACCATGAAAACGGGAAACCATCAGGACCCATaGTGCTTCATTCTGGCTGGCATGGTTAAAGCCACT +
Preference number: 3 (lower is better)
Translates to: FVTMKTGNHQDP*CFILAGMVKAT
Trigger: AGTGGCTTTAACCATGCCAGCCAGAATGAAGCATCATGGGTCCTGATGGTTTCCCGTTTTCATGGTAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR TCA 72 bp AGGGCACTGCTTCCTATCTCAGGCCTTTTCCTTCACTaGAAAACTTCAAACCAAACCAAGAGGAGTCATTTC +
Preference number: 3 (lower is better)
Translates to: RALLPISGLFLH*KTSNQTKRSHF
Trigger: GAAATGACTCCTCTTGGTTTGGTTTGAAGTTTTTCAGTGAAGGAAAAGGCCTGAGATAGGAAGCAGTGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CCA 72 bp AGTCAAGCTGAAGAGAAGGTGCCCCTGGATCACCAATaGCTTTCAGGCTTTTATTTGGATATTTGGTCTTTC +
Preference number: 3 (lower is better)
Translates to: SQAEEKVPLDHQ*LSGFYLDIWSF
Trigger: GAAAGACCAAATATCCAAATAAAAGCCTGAAAGCCATTGGTGATCCAGGGGCACCTTCTCTTCAGCTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR-3UTR CAA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCATCTGCAGTAAGTTTTaGGCAAAACAATGCAGTGGC +
Preference number: 3 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFICSKF*AKQCSG
Trigger: GCCACTGCATTGTTTTGCCAAAAACTTACTGCAGAT...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGTGGCTGCAGCTCGCGTaGTTCCCGTCCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMWLQLA*FPSCRR
Trigger: GCGGCGGCAGGACGGGAACCACGCGAGCTGCAGCCA...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338244.6
CDS-3UTR CCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACCCAGTGTGCACGTGCTaGCCCGGTCAGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: APWRSELCECSGPEPHTNPVCTC*PGQGQG
Trigger: ACCCTGGCCCTGACCGGGCCAGCACGTGCACACTGG...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGGCCAGTGTGCACGTaGTGGCCCGGTCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADRPVCT*WPGQGQ
Trigger: CTGGCCCTGACCGGGCCAGCACGTGCACACTGGCCT...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACTGCCCAGAGCGAGCATaGGGGCTGCTCCGCACTGTA +
Preference number: 4 (lower is better)
Translates to: APWRSELCECSGPEPHTNCPERA*GLLRTV
Trigger: TACAGTGCGGAGCAGCCCTCATGCTCGCTCTGGGCA...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGAGGCACCCACGCAGCTaGCCAAAGCTCGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWRHPRS*PKLDQA
Trigger: GGCCTGGTCGAGCTTTGGTCAGCTGCGTGGGTGCCT...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTGCACTACTCGGGTTCTaGCTGCAGGAGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVALLGF*LQEGQR
Trigger: CCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGC...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACGGCTCTCTCCCCCGCTaGCTGGAAACCAGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADGSLPR*LETREA
Trigger: GGCCTCTCTGGTTTCCAGGCAGCGGGGGAGAGAGCC...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTAGGTGTGGCTGGGTGTaGACAGCTGGCGTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVRCGWV*TAGVQR
Trigger: TCGCTGGACGCCAGCTGTGCACACCCAGCCACACCT...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGACAGCGCCGCAGCACTaGAGAGCTGAGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMTAPQH*RAEPAW
Trigger: CCAGGCTGGCTCAGCTCTCCAGTGCTGCGGCGCTGT...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACAGCGAGCATGAGGGCTaGTCCGCACTGTATCACGCG +
Preference number: 4 (lower is better)
Translates to: APWRSELCECSGPEPHTNSEHEG*SALYHA
Trigger: CGCGTGATACAGTGCGGAGCAGCCCTCATGCTCGCT...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGACCATGCCCTGCCGCTaGAGACAGGAGACAGGCACC +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMTMPCR*RQETGT
Trigger: GGTGCCTGTCTCCTGTCTCCAGCGGCAGGGCATGGT...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTGCAGACGCTGAACGCTaGCAAAACCGGGTGGCCGTT +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVADAER*QNRVAV
Trigger: AACGGCCACCCGGTTTTGCCAGCGTTCAGCGTCTGC...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACGCAGACGCTGAACGCTaGCAAAACCGGGTGGCCGTT +
Preference number: 4 (lower is better)
Translates to: APWRSELCECSGPEPHTNADAER*QNRVAV
Trigger: AACGGCCACCCGGTTTTGCCAGCGTTCAGCGTCTGC...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGGACGCCCAGTCAAGCTaGAGAGAAGGTGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMDAQSS*REGAPG
Trigger: TCCAGGGGCACCTTCTCTTCAGCTTGACTGGGCGTC...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTCAACAGGAAGGGCACTaGGATCGTGCCGCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVQQEGH*DRAAEA
Trigger: TGCTTCAGCGGCACGATCGCAGTGCCCTTCCTGTTG...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGGGCACAGGACAGCCGTaGACAGGCGTAGTAGTCACC +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWGTGQP*TGVVVT
Trigger: GGTGACTACTACGCCTGTGCACGGCTGTCCTGTGCC...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACGAAAAGAGGCCAGTGTaGACGTGCTGGCCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADEKRPV*TCWPGQ
Trigger: CTGACCGGGCCAGCACGTGCACACTGGCCTCTTTTC...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACTCATTGCAGGAGGGCTaGCAGCCTCAAGAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: APWRSELCECSGPEPHTNSLQEG*QPQECP
Trigger: GGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGA...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGCGAGTGTACACCCCATaGACGGCCATCCCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMRVYTP*TAIPQD
Trigger: ATCCTGGGGGATGGCCGTGCATGGGGTGTACACTCG...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGGACACAGACCGCGAGTaGCCACCGTGTCCCCCAATA +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMDTDRE*PPCPPI
Trigger: TATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTC...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 72 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTaGAATCCTCCTGATACAACCCGGCCCAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAG*NPPDTTRPKEG
Trigger: CCCCTCCTTGGGCCGGGTTGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 72 bp CAGACGCTGAACGCTGGCAAAACCGGGTGGCCGTTCTaGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QTLNAGKTGWPF*HYSGSDCRRGR
Trigger: TCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGGCCACCCGGTTTTGCCAGCGTTCAGCGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGACGCAAAGAGGGCGCTaGACTTCCCGATCATGCCCA +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMTQRGR*TSRSCP
Trigger: TGGGCATGATCGGGAAGTTCAGCGCCCTCTTTGCGT...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGGAATGGGAAGTGTCATaGCACAGACCGCGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMEWEVS*HRPRVA
Trigger: GGCCACTCGCGGTCTGTGTCATGACACTTCCCATTC...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGCTTCCCATTATTCTGTaGAGCAGGGGTGGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMLPIIL*SRGGGP
Trigger: AGGGCCCCCACCCCTGCTTCACAGAATAATGGGAAG...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGTTGTCAGCATGGCAATaGCCCAGTGCTTCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMLSAWQ*PSASRL
Trigger: GAGCCGGGAAGCACTGGGGCATTGCCATGCTGACAA...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTGCTCTGCGTGTTACCTaGCCCAGCTTCCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVALRVT*PSFPSS
Trigger: TGAAGAAGGGAAGCTGGGGCAGGTAACACGCAGAGC...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACGCTCACCGCTGGAGGTaGCGCCTCCATTTATCACCA +
Preference number: 4 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADAHRWR*RLHLSP
Trigger: TGGTGATAAATGGAGGCGCCACCTCCAGCGGTGAGC...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGCGTACCCCACACACATaGCATCGGCCAACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMRTPHT*HRPTGR
Trigger: CCTTCCTGTTGGCCGATGCCATGTGTGTGGGGTACG...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGCGTACCCCACACACATaGCATCGGCCAACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWRTPHT*HRPTGR
Trigger: CCTTCCTGTTGGCCGATGCCATGTGTGTGGGGTACG...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTGAAGCACGCCTTGCCTaGCATCTGTGCGAGCATAGA +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVEARLA*HLCEHR
Trigger: TCTATGCTCGCACAGATGCCAGGCAAGGCGTGCTTC...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGCCTGGACCCTGGAGGTaGCTTATAGGAAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWPGPWR*LIGKPA
Trigger: GGCTGGCTTTCCTATAAGCCACCTCCAGGGTCCAGG...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGCATACTAGTGCCCCTTaGTCAGAGGAGGTCTCCGCG +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWHTSAP*SEEVSA
Trigger: CGCGGAGACCTCCTCTGACCAAGGGGCACTAGTATG...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATCCAGTGTGCACGTGCTaGCCCGGTCAGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDPVCTC*PGQGQG
Trigger: ACCCTGGCCCTGACCGGGCCAGCACGTGCACACTGG...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTCAGGAATGCACCGTGTaGACACCAGGCTGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVQECTV*TPGCQE
Trigger: TTCTTGGCAGCCTGGTGTCCACACGGTGCATTCCTG...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGACCTTCAATCTGGCCTaGCCACTCCCATGGCATCCG +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWTFNLA*PLPWHP
Trigger: CGGATGCCATGGGAGTGGCCAGGCCAGATTGAAGGT...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTGGCGTGCAGCAGGTGTaGCTGGGTGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISGVQQV*LGVHSW
Trigger: CCAGCTGTGCACACCCAGCCACACCTGCTGCACGCC...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACGCAAAAGCACTGGCCTaGAACAGGGGTAACCTGCAT +
Preference number: 4 (lower is better)
Translates to: APWRSELCECSGPEPHTNAKALA*NRGNLH
Trigger: ATGCAGGTTACCCCTGTTTCAGGCCAGTGCTTTTGC...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACACAATAACATCCACATaGCGGCAGAGCCAAGACGCC +
Preference number: 4 (lower is better)
Translates to: APWRSELCECSGPEPHTNTITST*RQSQDA
Trigger: GGCGTCTTGGCTCTGCCGTCATGTGGATGTTATTGT...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGGAGTTCCTGGAGCTGTaGTGTCCAAGGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWEFLEL*CPRAGE
Trigger: TTCTCCTGCCCTTGGACATCACAGCTCCAGGAACTC...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379333.5
CDS-3UTR GCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAAAGATACATGCCTCACTaGGGCCAGGCCACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LRATHCRRAASLKSVPRQRYMPH*GQATGH
Trigger: GTGCCCTGTGGCCTGGCCGCAGTGAGGCATGTATCT...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATAGGCCAGTGTGCACGTaGTGGCCCGGTCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHRPVCT*WPGQGQ
Trigger: CTGGCCCTGACCGGGCCAGCACGTGCACACTGGCCT...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGACGGTGACATGGCAATaGTGCAAAGACAGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWTVTWQ*CKDSAA
Trigger: TGCGGCGCTGTCTTTGCAGCATTGCCATGTCACCGT...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAAGCGAGCTTTGCGAATaGTCAGGCCCGGAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTSELCE*SGPEPH
Trigger: GTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCT...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTGAAGGGTGTCCTAAGTaGCTGGAAACACGCACAGCA +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVEGCPK*LETRTA
Trigger: TGCTGTGCGTGTTTCCAGGCACTTAGGACACCCTTC...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTCGGCCGCAGACACGGTaGGCAGTCCCCACTGAAATG +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISRPQTR*AVPTEM
Trigger: CATTTCAGTGGGGACTGCCCACCGTGTCTGCGGCCG...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACACGGCCGCAGACACGGTaGGCAGTCCCCACTGAAATG +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTRPQTR*AVPTEM
Trigger: CATTTCAGTGGGGACTGCCCACCGTGTCTGCGGCCG...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACGAGAGCAGCTGGAAGTaGAGGCTTATTCAAGCTAGG +
Preference number: 4 (lower is better)
Translates to: APWRSELCECSGPEPHTNESSWK*RLIQAR
Trigger: CCTAGCTTGAATAAGCCTTCACTTCCAGCTGCTCTC...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTGACTACTTCTATCAGTaGGGACATGATGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVDYFYQ*GHDDGP
Trigger: GGGGCCATCATCATGTCCTCACTGATAGAAGTAGTC...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAAGGCCGAGGAGGCCGATaGCTACTTCTATCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LRATHCRRAASLKSVPRQGRGGR*LLLSVR
Trigger: CCTCACTGATAGAAGTAGTCATCGGCCTCCTCGGCC...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGTGTTGTCGCTCTTCCTaGGGCCTTTCCATGTGTAGC +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMCCRSS*GLSMCS
Trigger: GCTACACATGGAAAGGCCTCAGGAAGAGCGACAACA...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGCAGACGAGGGTCAAATaGCAAGGAAACAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWQTRVK*QGNRSR
Trigger: CCTGGACCTGTTTCCTTGTCATTTGACCCTCGTCTG...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGCGGCCACTAGTGAAATaGAAAGAGGCCAGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMRPLVK*KEASVH
Trigger: GTGCACACTGGCCTCTTTTCATTTCACTAGTGGCCG...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTGCCCATCAGCTTGTGTaGCTGGTGCCTTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISAHQLV*LVPWVA
Trigger: TGCCACCCAAGGCACCAGTCACACAAGCTGATGGGC...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATAGGCACCCACGCAGCTaGCCAAAGCTCGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHRHPRS*PKLDQA
Trigger: GGCCTGGTCGAGCTTTGGTCAGCTGCGTGGGTGCCT...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACCACTCCAACAGGAGTTaGAAGGGTAGGGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADHSNRS*KGRASF
Trigger: GAAGGAAGCCCTACCCTTTCAACTCCTGTTGGAGTG...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTGAAAGCTGGGTGCTTTaGCTCGTCTTCGTATTTGCC +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVESWVL*LVFVFA
Trigger: GGCAAATACGAAGACGAGGCAAAGCACCCAGCTTTC...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAGCTGGGGGTCCAGACTaGCAGTGCTATCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTAGGPD*QCYPGS
Trigger: AGACCCTGGATAGCACTGGCAGTCTGGACCCCCAGC...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTCTTGCCTGGCATCTGTaGGAGCATAGAAGCCATACT +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVLAWHL*EHRSHT
Trigger: AGTATGGCTTCTATGCTCGCACAGATGCCAGGCAAG...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGTCCACGTGGCGGCTCTaGGTGTTACCTGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLSTWRL*VLPAPA
Trigger: AGCTGGGGCAGGTAACACGCAGAGCCGCCACGTGGA...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTCCCCCAGGATGCTGCTaGTTCTCTGGCCAGATGGGT +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISPPGCC*FSGQMG
Trigger: ACCCATCTGGCCAGAGAAGCAGCAGCATCCTGGGGG...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAATGGAGAAGCGAGCTTTaGGAATGCTCAGGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: LRATHCRRAASLKSVPRQWRSEL*ECSGPE
Trigger: CTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCA...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAAGGCTCTTCTAGTGCCTaGAGCCCCCGATTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LRATHCRRAASLKSVPRQGSSSA*SPRFSS
Trigger: GCTTGAGAATCGGGGGCTCCAGGCACTAGAAGAGCC...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAACCTGGACCCTGGAGGTaGCTTATAGGAAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LRATHCRRAASLKSVPRQPGPWR*LIGKPA
Trigger: GGCTGGCTTTCCTATAAGCCACCTCCAGGGTCCAGG...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACATCAGCTTGTGTGACTaGTGCCTTGGGTGGCACTCT +
Preference number: 4 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADISLCD*CLGWHS
Trigger: AGAGTGCCACCCAAGGCACCAGTCACACAAGCTGAT...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGTATTCACCTTCAATCTaGCCTGGCCACTCCCATGGC +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWYSPSI*PGHSHG
Trigger: GCCATGGGAGTGGCCAGGCCAGATTGAAGGTGAATA...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGGCGTGCAGCAGGTGTaGCTGGGTGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHGVQQV*LGVHSW
Trigger: CCAGCTGTGCACACCCAGCCACACCTGCTGCACGCC...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACGAAGATCTGAGTTCCTaGAGCTGTGATGTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: APWRSELCECSGPEPHTNEDLSS*SCDVQG
Trigger: CCCTTGGACATCACAGCTCCAGGAACTCAGATCTTC...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379333.5
CDS-3UTR TCA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACGGTATAAATCATGTCTaGTCGCTGGGGGTCCAGACT +
Preference number: 4 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADGINHV*SLGVQT
Trigger: AGTCTGGACCCCCAGCGATCAGACATGATTTATACC...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAACGCAAAGAGGGCGCTaGACTTCCCGATCATGCCCA +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTTQRGR*TSRSCP
Trigger: TGGGCATGATCGGGAAGTTCAGCGCCCTCTTTGCGT...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTCTCACAGCAGAAAAGTaGTTCGCAGTCTGTCTTAGC +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVLTAEK*FAVCLS
Trigger: GCTAAGACAGACTGCGAATCACTTTTCTGCTGTGAG...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTCAACAGGAAGGGCACTaGGATCGTGCCGCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISQQEGH*DRAAEA
Trigger: TGCTTCAGCGGCACGATCGCAGTGCCCTTCCTGTTG...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATGGCTCTCTCCCCCGCTaGCTGGAAACCAGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNGSLPR*LETREA
Trigger: GGCCTCTCTGGTTTCCAGGCAGCGGGGGAGAGAGCC...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAAGCTCTGCGTGTTACCTaGCCCAGCTTCCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LRATHCRRAASLKSVPRQALRVT*PSFPSS
Trigger: TGAAGAAGGGAAGCTGGGGCAGGTAACACGCAGAGC...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGGCTGCCAAGAACCATaGCCTGCCGCTGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHGCQEP*PAAGDR
Trigger: CCTGTCTCCAGCGGCAGGGCATGGTTCTTGGCAGCC...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTTCATTGCAGGAGGGCTaGCAGCCTCAAGAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISSLQEG*QPQECP
Trigger: GGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGA...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATCCCCCAGGATGCTGCTaGTTCTCTGGCCAGATGGGT +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDPPGCC*FSGQMG
Trigger: ACCCATCTGGCCAGAGAAGCAGCAGCATCCTGGGGG...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTCCGGGTGGCCGTTCTTaGACTACTCGGGTTCTGACT +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISPGGRS*TTRVLT
Trigger: AGTCAGAACCCGAGTAGTGCAAGAACGGCCACCCGG...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAGGCTCTTCTAGTGCCTaGAGCCCCCGATTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTGSSSA*SPRFSS
Trigger: GCTTGAGAATCGGGGGCTCCAGGCACTAGAAGAGCC...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACATGTCCTGCTCACCGCTaGAGGTGGCGCCTCCATTTA +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTCPAHR*RWRLHL
Trigger: TAAATGGAGGCGCCACCTCCAGCGGTGAGCAGGACA...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAATGATGATGGCCCCCTaGATCTCTCGGATCCGGGGA +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTMMMAP*ISRIRG
Trigger: TCCCCGGATCCGAGAGATCCAGGGGGCCATCATCAT...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTATGATGATGGCCCCCTaGATCTCTCGGATCCGGGGA +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISMMMAP*ISRIRG
Trigger: TCCCCGGATCCGAGAGATCCAGGGGGCCATCATCAT...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACCCACTGAAATGGGTATaGAACCTTAAACCACGGGGC +
Preference number: 4 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADPLKWV*NLKPRG
Trigger: GCCCCGTGGTTTAAGGTTCCATACCCATTTCAGTGG...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACACATACTAGTGCCCCTTaGTCAGAGGAGGTCTCCGCG +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTHTSAP*SEEVSA
Trigger: CGCGGAGACCTCCTCTGACCAAGGGGCACTAGTATG...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACGACTGGTGCCTTGGGTaGCACTCTATACTCATCACA +
Preference number: 4 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADDWCLG*HSILIT
Trigger: TGTGATGAGTATAGAGTGCCACCCAAGGCACCAGTC...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAAAACGGACGTGCGACATaGCAACCCACAGGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: LRATHCRRAASLKSVPRQNGRAT*QPTGSL
Trigger: GAGACTTCCTGTGGGTTGCCATGTCGCACGTCCGTT...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACCTCGGACAGAATTATTaGGTTGGCCACAGTGGAATC +
Preference number: 4 (lower is better)
Translates to: APWRSELCECSGPEPHTNLGQNY*VGHSGI
Trigger: GATTCCACTGTGGCCAACCCAATAATTCTGTCCGAG...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAACAAAGTACGGGGTGGTaGTTCAAAGCCCCAGCAACG +
Preference number: 4 (lower is better)
Translates to: LRATHCRRAASLKSVPRQQSTGW*FKAPAT
Trigger: CGTTGCTGGGGCTTTGAACCACCACCCCGTACTTTG...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTAGCACGTTAAGTCCCTaGGCTCTTTTCCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVSTLSP*ALFQSQ
Trigger: TTGGCTTTGGAAAAGAGCCCAGGGACTTAACGTGCT...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 72 bp GAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTaGGGTGGCACTCTATACTCATCACACCGGCCAACA +
Preference number: 4 (lower is better)
Translates to: EPRRPSACVTGA*GGTLYSSHRPT
Trigger: TGTTGGCCGGTGTGATGAGTATAGAGTGCCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 72 bp CATCCACATGACGGCAGAGCCAAGACGCCCATCAGCTaGTGTGACTGGTGCCTTGGGTGGCACTCTATACTC +
Preference number: 4 (lower is better)
Translates to: HPHDGRAKTPIS*CDWCLGWHSIL
Trigger: GAGTATAGAGTGCCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATGTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACACTCCATGCCGTCGAGTaGTTTGTTCCCTTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTLHAVE*FVPFAH
Trigger: GTGGGCAAAGGGAACAAATCACTCGACGGCATGGAG...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACACTGGGAGTCTTCATCTaGACTCCGGCTGTTGTCGCT +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTLGVFI*TPAVVA
Trigger: AGCGACAACAGCCGGAGTTCAGATGAAGACTCCCAG...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGTACAACAAGCTTCCCTaGTGGTGTCCACAGCTTTAC +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWYNKLP*WCPQLY
Trigger: GTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTA...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGAGATGTGCCACCTCATaGAGCGAGGGCACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLRCATS*SEGTAS
Trigger: GGAAGCAGTGCCCTCGCTTCATGAGGTGGCACATCT...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATGGGGTTGAATCCTCCTaGTACAACCCGGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDGVESS*YNPAQG
Trigger: TCCTTGGGCCGGGTTGTATCAGGAGGATTCAACCCC...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTCTCCATCCCCCACTGTaGATATGGCATCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISLHPPL*IWHHLL
Trigger: CAGGAGGTGATGCCATATTCACAGTGGGGGATGGAG...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTCCTCGTCTTCGTATTTaGCTTCTGTTGAACTTCCAG +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVPRLRI*LLLNFQ
Trigger: CTGGAAGTTCAACAGAAGGCAAATACGAAGACGAGG...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACGAGAGAGCTCTTTTCTaGAATGCCGTTTTCCGTAGT +
Preference number: 4 (lower is better)
Translates to: APWRSELCECSGPEPHTNERALF*NAVFRS
Trigger: ACTACGGAAAACGGCATTGCAGAAAAGAGCTCTCTC...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACCAGATGTGTTCTGTGTaGAACAGCTCTGCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADQMCSV*NSSAVP
Trigger: TGGAACAGCAGAGCTGTTGCACACAGAACACATCTG...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGAGAAGCCATACTTTGTaGTGTCGGGAGGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWRSHTL*CREGRH
Trigger: ATGTCTTCCCTCCCGACAGCACAAAGTATGGCTTCT...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATAGATACATGCCTCACTaGGGCCAGGCCACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHRYMPH*GQATGH
Trigger: GTGCCCTGTGGCCTGGCCGCAGTGAGGCATGTATCT...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGAAAAGAGGCCAGTGTaGACGTGCTGGCCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHEKRPV*TCWPGQ
Trigger: CTGACCGGGCCAGCACGTGCACACTGGCCTCTTTTC...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGGGAGCCTGTTGGCTaGTTTTCTTATCACCTTTGG +
Preference number: 4 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADREPVG*FSYHLW
Trigger: CCAAAGGTGATAAGAAAAGCAGCCAACAGGCTCCCT...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAGTGACATGGCAATGCTaGAAAGACAGCGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTVTWQC*KDSAAA
Trigger: TGCTGCGGCGCTGTCTTTGCAGCATTGCCATGTCAC...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATCTGAGAGCAACTCATTaGAGGAGGGCTGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDLRATH*RRAASL
Trigger: GAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTAGGTGTGGCTGGGTGTaGACAGCTGGCGTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTRCGWV*TAGVQR
Trigger: TCGCTGGACGCCAGCTGTGCACACCCAGCCACACCT...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATTACTCGGGTTCTGACTaGAGGAGGGGCAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHYSGSD*RRGRGW
Trigger: CCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTA...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATGCTCACCGCTGGAGGTaGCGCCTCCATTTATCACCA +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDAHRWR*RLHLSP
Trigger: TGGTGATAAATGGAGGCGCCACCTCCAGCGGTGAGC...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGTATCTAAAGACAGGATaGCTCGAGCAGGGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWYLKTG*LEQGPK
Trigger: TTTTGGCCCCTGCTCGAGCCATCCTGTCTTTAGATA...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACCTGTCTGAGGTAACTTaGAAGGACGAGCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADLSEVT*KDEPKE
Trigger: TTCTTTGGGCTCGTCCTTCCAAGTTACCTCAGACAG...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTCAGGAATGCACCGTGTaGACACCAGGCTGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISQECTV*TPGCQE
Trigger: TTCTTGGCAGCCTGGTGTCCACACGGTGCATTCCTG...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAGGGGCTACGGTGACATaGCAATGCTGCAAAGACAGC +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTGATVT*QCCKDS
Trigger: GCTGTCTTTGCAGCATTGCCATGTCACCGTAGCCCC...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGCCAAGGCAAGAGGGATaGAAACCGCGAGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLPRQEG*KPRASV
Trigger: CACACTGGCTCGCGGTTTCCATCCCTCTTGCCTTGG...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGAGCACGTTAAGTCCCTaGGCTCTTTTCCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMSTLSP*ALFQSQ
Trigger: TTGGCTTTGGAAAAGAGCCCAGGGACTTAACGTGCT...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATTGCCTTATGGGTCCATaGGCAGACGCTGAACGCTGG +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDCLMGP*ADAERW
Trigger: CCAGCGTTCAGCGTCTGCCCATGGACCCATAAGGCA...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACACTCTTAGCACCTAAGTaGTGTGGCGTAGACCTGTCC +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTLLAPK*CGVDLS
Trigger: GGACAGGTCTACGCCACATCACTTAGGTGCTAAGAG...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTTGTTCCATTGGCAACTaGAACATCTGTGGTGTTACA +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVCSIGN*NICGVT
Trigger: TGTAACACCACAGATGTTTCAGTTGCCAATGGAACA...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGGACGTTCAACACTTaGTCGATTCCTGTTATCCCT +
Preference number: 4 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADRTFNT*SIPVIP
Trigger: AGGGATAACAGGAATCGATCAAGTGTTGAACGTCCT...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGGTGGTGGAAGGGAACTaGAGCAAGGAATGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLVVEGN*SKEWLQ
Trigger: CTGCAGCCATTCCTTGCTTCAGTTCCCTTCCACCAC...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATGCTTCCTTCCCTGTGTaGAGGCCTACAGAGGGCACC +
Preference number: 4 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNASFPV*RPTEGT
Trigger: GGTGCCCTCTGTAGGCCTTCACACAGGGAAGGAAGC...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATTCCATGGGCAGACGCTaGACGCTGGCAAAACCGGGT +
Preference number: 4 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNSMGRR*TLAKPG
Trigger: ACCCGGTTTTGCCAGCGTTCAGCGTCTGCCCATGGA...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGGTCCAGACTGCCAGTaGTATCCAGGGTCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHGPDCQ*YPGSQR
Trigger: TCGCTGAGACCCTGGATAGCACTGGCAGTCTGGACC...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACACCAGAAGCACGCCTTaGCTGGCATCTGTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: WFKAPATQANDVNGKCHDTRSTP*LASVRA
Trigger: TGCTCGCACAGATGCCAGGCAAGGCGTGCTTCTGGT...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTAGCGAGCATGAGGGCTaGTCCGCACTGTATCACGCG +
Preference number: 4 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTSEHEG*SALYHA
Trigger: CGCGTGATACAGTGCGGAGCAGCCCTCATGCTCGCT...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAACTCTTTCCTCTGGAGTaGCTGGGATGGTGTTATCCA +
Preference number: 4 (lower is better)
Translates to: LRATHCRRAASLKSVPRQLFPLE*LGWCYP
Trigger: TGGATAACACCATCCCAGGCACTCCAGAGGAAAGAG...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGGTGATTTGTTCCCTTTaGCCACACCCTTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMVICSL*PHPSSI
Trigger: AATGGAAGAAGGGTGTGGGCAAAGGGAACAAATCAC...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGAATTGTACGACTCCATaGCGTCGAGTGATTTGTTCC +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMNCTTP*RRVICS
Trigger: GGAACAAATCACTCGACGGCATGGAGTCGTACAATT...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTGATATTTGGTCTTTCTaGTCACCTGGAGAGCTAGAA +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVDIWSF*SPGELE
Trigger: TTCTAGCTCTCCAGGTGAGCAGAAAGACCAAATATC...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATCGAGTGTACACCCCATaGACGGCCATCCCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNRVYTP*TAIPQD
Trigger: ATCCTGGGGGATGGCCGTGCATGGGGTGTACACTCG...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGGAAGCACGCCTTGCCTaGCATCTGTGCGAGCATAGA +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLEARLA*HLCEHR
Trigger: TCTATGCTCGCACAGATGCCAGGCAAGGCGTGCTTC...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATGGCTATCCCGTGGCCTaGGAGTCTTCATCTGAACTC +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDGYPVA*ESSSEL
Trigger: GAGTTCAGATGAAGACTCCCAGGCCACGGGATAGCC...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACCTCCAAAGGGAGGACTaGAACTTCAAATTTAGTGAC +
Preference number: 4 (lower is better)
Translates to: APWRSELCECSGPEPHTNLQRED*NFKFSD
Trigger: GTCACTAAATTTGAAGTTCCAGTCCTCCCTTTGGAG...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGAAAGCCAGCCCTGGGTaGTGGAAGGGAACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLKASPG*WKGTEA
Trigger: TGCTTCAGTTCCCTTCCACCACCCAGGGCTGGCTTT...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATCCAAGGCAAGAGGGATaGAAACCGCGAGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHPRQEG*KPRASV
Trigger: CACACTGGCTCGCGGTTTCCATCCCTCTTGCCTTGG...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGCCCCTGGATCACCAATaGCTTTCAGGCTTTTATTTG +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWPLDHQ*LSGFYL
Trigger: CAAATAAAAGCCTGAAAGCCATTGGTGATCCAGGGG...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGCATGATGCTTCATTCTaGCTGGCATGGTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWHDASF*LAWLKP
Trigger: TGGCTTTAACCATGCCAGCCAGAATGAAGCATCATG...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGCATGATGCTTCATTCTaGCTGGCATGGTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMHDASF*LAWLKP
Trigger: TGGCTTTAACCATGCCAGCCAGAATGAAGCATCATG...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATCAAGAGGAGGCTCCCTaGAGAAGCGAGCTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDQEEAP*RSELCE
Trigger: TTCGCAAAGCTCGCTTCTCCAGGGAGCCTCCTCTTG...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGCAAGAGGAGGCTCCCTaGAGAAGCGAGCTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLQEEAP*RSELCE
Trigger: TTCGCAAAGCTCGCTTCTCCAGGGAGCCTCCTCTTG...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 72 bp GGGTGGCCAAGAGAAGGTGCAGCCGAGAATCAGATATaGGCTTCAGGGTCCTTTCCTTTTCCCTCCAATGCC +
Preference number: 4 (lower is better)
Translates to: GWPREGAAENQI*ASGSFPFPSNA
Trigger: GGCATTGGAGGGAAAAGGAAAGGACCCTGAAGCCAATATCTGATTCTCGGCTGCACCTTCTCTTGGCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGTGTTCCATTGGCAACTaGAACATCTGTGGTGTTACA +
Preference number: 4 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMCSIGN*NICGVT
Trigger: TGTAACACCACAGATGTTTCAGTTGCCAATGGAACA...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATAGAGGCCAACAGCTGTaGTCATTCCAAAGAGCGTGC +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDRGQQL*SFQRAC
Trigger: GCACGCTCTTTGGAATGATCACAGCTGTTGGCCTCT...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGCAGACGAGGGTCAAATaGCAAGGAAACAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLQTRVK*QGNRSR
Trigger: CCTGGACCTGTTTCCTTGTCATTTGACCCTCGTCTG...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATAGCACTACTCGGGTTCTaGCTGCAGGAGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKIALLGF*LQEGQR
Trigger: CCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGC...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAAGCAGAGATGAGGCCTaGAAACGGCATCTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTSRDEA*KRHLLA
Trigger: TGCTAAGAGATGCCGTTTGCAGGCCTCATCTCTGCT...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTCTTGCCTGGCATCTGTaGGAGCATAGAAGCCATACT +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISLAWHL*EHRSHT
Trigger: AGTATGGCTTCTATGCTCGCACAGATGCCAGGCAAG...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGTCATTCCAAAGAGCGTaGAGAACAGGGCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLSFQRA*RTGLPA
Trigger: TGCTGGGAGCCCTGTTCTGCACGCTCTTTGGAATGA...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGGAACTACAGATACATaGCTCACTGCGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHGTTDT*LTAARP
Trigger: TGGCCTGGCCGCAGTGAGGCATGTATCTGTAGTTCC...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGTCCTTTTCCCTCCAATaGCCCAAACAGATGTTCATT +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWSFSLQ*PKQMFI
Trigger: AATGAACATCTGTTTGGGGCATTGGAGGGAAAAGGA...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGTGACATGGCAATGCTaGAAAGACAGCGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHVTWQC*KDSAAA
Trigger: TGCTGCGGCGCTGTCTTTGCAGCATTGCCATGTCAC...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGGATATTTGGTCTTTCTaGTCACCTGGAGAGCTAGAA +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWDIWSF*SPGELE
Trigger: TTCTAGCTCTCCAGGTGAGCAGAAAGACCAAATATC...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGAAGCTGAAGAGAAGGTaGCCCTGGATCACCAATGGC +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLKLKRR*PWITNG
Trigger: GCCATTGGTGATCCAGGGGCACCTTCTCTTCAGCTT...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAATCCCCTTCAGGTGTGTaGTTAAACCCAAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LRATHCRRAASLKSVPRQSPSGV*LNPRSR
Trigger: TCTGCTTCTTGGGTTTAAGCACACACCTGAAGGGGA...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATACACACTAACGCGGCGTaGAGCAGGTGTGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKIHTNAA*SRCGWV
Trigger: CACCCAGCCACACCTGCTGCACGCCGCGTTAGTGTG...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATTGGAGAAGCGAGCTTTaGGAATGCTCAGGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNWRSEL*ECSGPE
Trigger: CTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCA...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATGAGTCAAGACCTAGCTaGCTGCAGCTCGCGTGGTTC +
Preference number: 4 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNESRPS*LQLAWF
Trigger: GAACCACGCGAGCTGCAGCCAGCTAGGTCTTGACTC...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338244.6
CDS-3UTR CCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATCTCTCCCCCGCTGCCTaGAAACCAGAGAGGCCAATT +
Preference number: 4 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNLSPAA*KPERPI
Trigger: AATTGGCCTCTCTGGTTTCCAGGCAGCGGGGGAGAG...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACGGCTATCCCGTGGCCTaGGAGTCTTCATCTGAACTC +
Preference number: 4 (lower is better)
Translates to: WFKAPATQANDVNGKCHDGYPVA*ESSSEL
Trigger: GAGTTCAGATGAAGACTCCCAGGCCACGGGATAGCC...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGGACCATGGCCAGCAATaGACACTCTCAAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLDHGQQ*TLSKGK
Trigger: CTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTC...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATAAAGCCCCTGGACCCTaGAGGTGGCTTATAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDKAPGP*RWLIGK
Trigger: CTTTCCTATAAGCCACCTCCAGGGTCCAGGGGCTTT...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTACCCATGGCCAGATCTaGGCACAGGGGAGCCACGCC +
Preference number: 4 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNATHGQI*AQGSHA
Trigger: GGCGTGGCTCCCCTGTGCCCAGATCTGGCCATGGGT...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTACAGACCGTTCCACGTaGCGGCTCTGCGTGTTACCT +
Preference number: 4 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTTDRST*RLCVLP
Trigger: AGGTAACACGCAGAGCCGCCACGTGGAACGGTCTGT...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGGGGCTACGGTGACATaGCAATGCTGCAAAGACAGC +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHGATVT*QCCKDS
Trigger: GCTGTCTTTGCAGCATTGCCATGTCACCGTAGCCCC...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATGGCAAAACAATGCAGTaGCTCCGAGGTGTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDGKTMQ*LRGVLA
Trigger: GGCAAGAACACCTCGGAGCCACTGCATTGTTTTGCC...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGACAGAATTATTGGGTTaGCCACAGTGGAATCAGAAC +
Preference number: 4 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWTELLG*PQWNQN
Trigger: GTTCTGATTCCACTGTGGCCAACCCAATAATTCTGT...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTAAACAAAGTACGGGGTaGTGGTTCAAAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISKQSTG*WFKAPA
Trigger: TGCTGGGGCTTTGAACCACCACCCCGTACTTTGTTT...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGGGTAGGTGGTCTCTGTaGAAACTGGAGACTAACCGG +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLGRWSL*KLETNR
Trigger: CCGGTTAGTCTCCAGTTTCCACAGAGACCACCTACC...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGTGCAGCAGGTGTGGCTaGGTGTGCACAGCTGGCGTC +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRCSRCG*VCTAGV
Trigger: GACGCCAGCTGTGCACACCCAGCCACACCTGCTGCA...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 72 bp AAGGGAGTGGGTTTCTGGATGACTAGAGCAGACACCTaGAGTGTTATGCAGCGGAAGACGCCCAGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: KGVGFWMTRADT*SVMQRKTPSQA
Trigger: AGCTTGACTGGGCGTCTTCCGCTGCATAACACTCAAGGTGTCTGCTCTAGTCATCCAGAAACCCACTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTAAGTTCAAAGCCGTATaGGAAGTCCCCGTTAGTGGA +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISKFKAV*EVPVSG
Trigger: TCCACTAACGGGGACTTCTCATACGGCTTTGAACTT...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTTCCATTACAATTCGCTaGGTTACATTTGCTTATGCA +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVSITIR*VTFAYA
Trigger: TGCATAAGCAAATGTAACTCAGCGAATTGTAATGGA...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACTCACCACCGGAAGAGTaGAGAAAGCTGGGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: WFKAPATQANDVNGKCHDSPPEE*RKLGAL
Trigger: CAAAGCACCCAGCTTTCTTCACTCTTCCGGTGGTGA...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTAGAAAATGGTCCCAATaGGCTGGCTGGTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTRKWSQ*AGWWPT
Trigger: AGTGGGCCACCAGCCAGCTCATTGGGACCATTTTCT...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACACATTTCTGGCGTATTaGGAAAACAGTAATACTAGG +
Preference number: 4 (lower is better)
Translates to: APWRSELCECSGPEPHTNTFLAY*ENSNTR
Trigger: CCTAGTATTACTGTTTTCTCAATACGCCAGAAATGT...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTATGCCCAGAGCGAGCATaGGGGCTGCTCCGCACTGTA +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELCPERA*GLLRTV
Trigger: TACAGTGCGGAGCAGCCCTCATGCTCGCTCTGGGCA...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATCTCCATGCCGTCGAGTaGTTTGTTCCCTTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNLHAVE*FVPFAH
Trigger: GTGGGCAAAGGGAACAAATCACTCGACGGCATGGAG...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGGCCCATCAGCTTGTGTaGCTGGTGCCTTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRAHQLV*LVPWVA
Trigger: TGCCACCCAAGGCACCAGTCACACAAGCTGATGGGC...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGGACGCCCAGTCAAGCTaGAGAGAAGGTGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRDAQSS*REGAPG
Trigger: TCCAGGGGCACCTTCTCTTCAGCTTGACTGGGCGTC...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATAGCAACGCAGGCCAATaGTGTGAATGGGAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDSNAGQ*CEWEVS
Trigger: TGACACTTCCCATTCACATCATTGGCCTGCGTTGCT...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATCTCCATCCCCCACTGTaGATATGGCATCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNLHPPL*IWHHLL
Trigger: CAGGAGGTGATGCCATATTCACAGTGGGGGATGGAG...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACAGATGGGTTCTGGAATaGGGCTTCTGCTACTGCTCC +
Preference number: 4 (lower is better)
Translates to: WFKAPATQANDVNGKCHDRWVLE*GFCYCS
Trigger: GGAGCAGTAGCAGAAGCCTCATTCCAGAACCCATCT...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGTCCATGGGCAGACGCTaGACGCTGGCAAAACCGGGT +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRSMGRR*TLAKPG
Trigger: ACCCGGTTTTGCCAGCGTTCAGCGTCTGCCCATGGA...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCCAAGACCTAGCTGGCTaGAGCTCGCGTGGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPQDLAG*SSRGSR
Trigger: ACGGGAACCACGCGAGCTGCAGCCAGCTAGGTCTTG...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338244.6
CDS-3UTR GCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAGTGAAGAAAGCTGGGTaGTTTGCCTCGTCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTVKKAG*FASSSY
Trigger: ATACGAAGACGAGGCAAAGCACCCAGCTTTCTTCAC...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTGTGAAGAAAGCTGGGTaGTTTGCCTCGTCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISVKKAG*FASSSY
Trigger: ATACGAAGACGAGGCAAAGCACCCAGCTTTCTTCAC...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATAGTGTCCTCATTGTCCTaGTCACCGCTGGAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKIVSSLS*SPLEVA
Trigger: CGCCACCTCCAGCGGTGAGCAGGACAATGAGGACAC...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTAATGGCAATGCCCCAGTaGTTCCCGGCTCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELMAMPQ*FPALSP
Trigger: GGGGGAGAGAGCCGGGAAGCACTGGGGCATTGCCAT...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATAGGCACAGGACAGCCGTaGACAGGCGTAGTAGTCACC +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKIGTGQP*TGVVVT
Trigger: GGTGACTACTACGCCTGTGCACGGCTGTCCTGTGCC...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACTCATTCCAAAGAGCGTaGAGAACAGGGCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: WFKAPATQANDVNGKCHDSFQRA*RTGLPA
Trigger: TGCTGGGAGCCCTGTTCTGCACGCTCTTTGGAATGA...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGTTCATTCAACATCTGTaGAGGCCTCACCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLFIQHL*RPHPWP
Trigger: TGGCCATGGGTGAGGCCTGCACAGATGTTGAATGAA...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATAGCTTGTGTGACTGGTaGCTTGGGTGGCACTCTATA +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDSLCDW*LGWHSI
Trigger: TATAGAGTGCCACCCAAGGCACCAGTCACACAAGCT...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTAGGGAGCCTGTTGGCTaGTTTTCTTATCACCTTTGG +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISREPVG*FSYHLW
Trigger: CCAAAGGTGATAAGAAAAGCAGCCAACAGGCTCCCT...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGATGAAGCGAGGGCACTaGTTCCTATCTCAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLMKRGH*FLSQAF
Trigger: AAAGGCCTGAGATAGGAAGCAGTGCCCTCGCTTCAT...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCGTGTGGACACCAGGCTaGCAAGAACCATGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPVWTPG*QEPCPA
Trigger: GGCAGGGCATGGTTCTTGGCAGCCTGGTGTCCACAC...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTCGAGGGGGACAGGAATaGACCGTGTGGACACCAGGC +
Preference number: 4 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNARGGQE*TVWTPG
Trigger: GCCTGGTGTCCACACGGTGCATTCCTGTCCCCCTCG...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTACACACTAACGCGGCGTaGAGCAGGTGTGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELHTNAA*SRCGWV
Trigger: CACCCAGCCACACCTGCTGCACGCCGCGTTAGTGTG...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTAAGCGAGCTTTGCGAATaGTCAGGCCCGGAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELSELCE*SGPEPH
Trigger: GTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCT...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATATACTCGGGTTCTGACTaGAGGAGGGGCAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKIYSGSD*RRGRGW
Trigger: CCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTA...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAAAGAGTGAAGAAAGCTaGGTGCTTTGCCTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTKSEES*VLCLVF
Trigger: GAAGACGAGGCAAAGCACCCAGCTTTCTTCACTCTT...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATAATGGTCCCAATGAGCTaGCTGGTGGCCCACTGGTCG +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKIMVPMS*LVAHWS
Trigger: CGACCAGTGGGCCACCAGCCAGCTCATTGGGACCAT...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAGCTCTGCTGTTCCATTaGCAACTGAAACATCTGTGG +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTALLFH*QLKHLW
Trigger: CCACAGATGTTTCAGTTGCCAATGGAACAGCAGAGC...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATAGCCAGCCCTGGGTGGTaGAAGGGAACTGAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKIASPGW*KGTEAR
Trigger: CCTTGCTTCAGTTCCCTTCCACCACCCAGGGCTGGC...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATGAGAGAGAAAGCCCCTaGACCCTGGAGGTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNERESP*TLEVAY
Trigger: ATAAGCCACCTCCAGGGTCCAGGGGCTTTCTCTCTC...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATGACTGGTGCCTTGGGTaGCACTCTATACTCATCACA +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDDWCLG*HSILIT
Trigger: TGTGATGAGTATAGAGTGCCACCCAAGGCACCAGTC...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGGCAAAACAATGCAGTaGCTCCGAGGTGTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHGKTMQ*LRGVLA
Trigger: GGCAAGAACACCTCGGAGCCACTGCATTGTTTTGCC...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTATATCATTCCCTCCCTaGAAAACTGTGACTATTATC +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVISFPP*KTVTII
Trigger: GATAATAGTCACAGTTTTCCAGGGAGGGAATGATAT...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTCTGGGTGTGCACAGCTaGCGTCCAGCGACAGCCATG +
Preference number: 4 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNALGVHS*RPATAM
Trigger: CATGGCTGTCGCTGGACGCCAGCTGTGCACACCCAG...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTACTGGGTGTGCACAGCTaGCGTCCAGCGACAGCCATG +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELLGVHS*RPATAM
Trigger: CATGGCTGTCGCTGGACGCCAGCTGTGCACACCCAG...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTATGCAGCAGGTGTGGCTaGGTGTGCACAGCTGGCGTC +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELCSRCG*VCTAGV
Trigger: GACGCCAGCTGTGCACACCCAGCCACACCTGCTGCA...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGGTGTCCTAAGTGCCTaGAAACACGCACAGCAATGC +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHGVLSA*KHAQQC
Trigger: GCATTGCTGTGCGTGTTTCCAGGCACTTAGGACACC...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACGGTGTCCTAAGTGCCTaGAAACACGCACAGCAATGC +
Preference number: 4 (lower is better)
Translates to: WFKAPATQANDVNGKCHDGVLSA*KHAQQC
Trigger: GCATTGCTGTGCGTGTTTCCAGGCACTTAGGACACC...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGGAACTGTCAGTAAGATaGCAACGTGGGGAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLELSVR*QRGEGC
Trigger: ACACCCTTCCCCACGTTGCCATCTTACTGACAGTTC...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGCAAGCTGGGGAACCTaGAAAGCTGGTGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTASWGT*KAGGVL
Trigger: AAGGACACCACCAGCTTTCCAGGTTCCCCAGCTTGC...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379333.5
CDS-3UTR CCA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTATGCCGTCTGCAAGCTaGGGAACCTGGAAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTMPSAS*GTWKAG
Trigger: ACCAGCTTTCCAGGTTCCCCAGCTTGCAGACGGCAT...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379333.5
CDS-3UTR TCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAAACTTCCAGCCTCCATTaGTTTGGATGTGGTATTCTT +
Preference number: 4 (lower is better)
Translates to: LRATHCRRAASLKSVPRQTSSLH*FGCGIL
Trigger: AAGAATACCACATCCAAATCAATGGAGGCTGGAAGT...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAAGGACGTTCAACACTTaGTCGATTCCTGTTATCCCT +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTRTFNT*SIPVIP
Trigger: AGGGATAACAGGAATCGATCAAGTGTTGAACGTCCT...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGTACAACAAGCTTCCCTaGTGGTGTCCACAGCTTTAC +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLYNKLP*WCPQLY
Trigger: GTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTA...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATAATTCACGTGTAACTTaGCCCATGGTTTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDNSRVT*PMVSGL
Trigger: GAGCCCAGAAACCATGGGTCAAGTTACACGTGAATT...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGAGATGTGCCACCTCATaGAGCGAGGGCACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRRCATS*SEGTAS
Trigger: GGAAGCAGTGCCCTCGCTTCATGAGGTGGCACATCT...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACCTAGAGCAGACACCTTaGGTGTTATGCAGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: WFKAPATQANDVNGKCHDLEQTP*VLCSGR
Trigger: TCTTCCGCTGCATAACACTCAAGGTGTCTGCTCTAG...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCGAATGGGAAGTGTCATaGCACAGACCGCGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPEWEVS*HRPRVA
Trigger: GGCCACTCGCGGTCTGTGTCATGACACTTCCCATTC...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACCGCAGGCCAATGATGTaGATGGGAAGTGTCATGACA +
Preference number: 4 (lower is better)
Translates to: WFKAPATQANDVNGKCHDRRPMM*MGSVMT
Trigger: TGTCATGACACTTCCCATTCACATCATTGGCCTGCG...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGCTTCCCATTATTCTGTaGAGCAGGGGTGGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRLPIIL*SRGGGP
Trigger: AGGGCCCCCACCCCTGCTTCACAGAATAATGGGAAG...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACGAAAGCTGGGTGCTTTaGCTCGTCTTCGTATTTGCC +
Preference number: 4 (lower is better)
Translates to: WFKAPATQANDVNGKCHDESWVL*LVFVFA
Trigger: GGCAAATACGAAGACGAGGCAAAGCACCCAGCTTTC...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCGGTCCAGACTGCCAGTaGTATCCAGGGTCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPGPDCQ*YPGSQR
Trigger: TCGCTGAGACCCTGGATAGCACTGGCAGTCTGGACC...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTAGCTGGGGGTCCAGACTaGCAGTGCTATCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELAGGPD*QCYPGS
Trigger: AGACCCTGGATAGCACTGGCAGTCTGGACCCCCAGC...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGTTGTCAGCATGGCAATaGCCCAGTGCTTCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRLSAWQ*PSASRL
Trigger: GAGCCGGGAAGCACTGGGGCATTGCCATGCTGACAA...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTAATTGTACGACTCCATaGCGTCGAGTGATTTGTTCC +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISNCTTP*RRVICS
Trigger: GGAACAAATCACTCGACGGCATGGAGTCGTACAATT...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTACGGCCACCGAAGATGTaGCACCTCATGAAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELRPPKM*HLMKRG
Trigger: CCCTCGCTTCATGAGGTGGCACATCTTCGGTGGCCG...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTAAAGCAAAACCTCTGTaGGAATTTGTTACCATGAAA +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVKAKPL*EFVTMK
Trigger: TTTCATGGTAACAAATTCGCACAGAGGTTTTGCTTT...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATACATCCCCCAGGATGCTaGTGCTTCTCTGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKIHPPGC*CFSGQM
Trigger: CATCTGGCCAGAGAAGCAGCAGCATCCTGGGGGATG...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCCATCCCCCAGGATGCTaGTGCTTCTCTGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPHPPGC*CFSGQM
Trigger: CATCTGGCCAGAGAAGCAGCAGCATCCTGGGGGATG...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATGAAGGGTGTCCTAAGTaGCTGGAAACACGCACAGCA +
Preference number: 4 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNEGCPK*LETRTA
Trigger: TGCTGTGCGTGTTTCCAGGCACTTAGGACACCCTTC...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGTGTCCTGCTCACCGCTaGAGGTGGCGCCTCCATTTA +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRCPAHR*RWRLHL
Trigger: TAAATGGAGGCGCCACCTCCAGCGGTGAGCAGGACA...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTGAGGAACATCTTCTATaGTATAAATCATGTCTGATC +
Preference number: 4 (lower is better)
Translates to: PRLATEARQAGQTGGQTVEEHLL*YKSCLI
Trigger: GATCAGACATGATTTATACCATAGAAGATGTTCCTC...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATTATCTAAAGACAGGATaGCTCGAGCAGGGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDYLKTG*LEQGPK
Trigger: TTTTGGCCCCTGCTCGAGCCATCCTGTCTTTAGATA...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTAGCCAGCCCTGGGTGGTaGAAGGGAACTGAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELASPGW*KGTEAR
Trigger: CCTTGCTTCAGTTCCCTTCCACCACCCAGGGCTGGC...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATAACAGACCGTTCCACGTaGCGGCTCTGCGTGTTACCT +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKITDRST*RLCVLP
Trigger: AGGTAACACGCAGAGCCGCCACGTGGAACGGTCTGT...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATAAGGGAGTGGGTTTCTaGATGACTAGAGCAGACACC +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHKGVGF*MTRADT
Trigger: GGTGTCTGCTCTAGTCATCCAGAAACCCACTCCCTT...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGCTCGGACAGAATTATTaGGTTGGCCACAGTGGAATC +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLLGQNY*VGHSGI
Trigger: GATTCCACTGTGGCCAACCCAATAATTCTGTCCGAG...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAAGTCTACATTTCATGTTaGGATTGCCCACACAAATGC +
Preference number: 4 (lower is better)
Translates to: LRATHCRRAASLKSVPRQVYISC*DCPHKC
Trigger: GCATTTGTGTGGGCAATCCCAACATGAAATGTAGAC...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTTCATTCTGGCTGGCATaGTTAAAGCCACTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISSFWLA*LKPLLL
Trigger: CAAGAGAAGTGGCTTTAACCATGCCAGCCAGAATGA...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCACCTTCAATCTGGCCTaGCCACTCCCATGGCATCCG +
Preference number: 4 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPTFNLA*PLPWHP
Trigger: CGGATGCCATGGGAGTGGCCAGGCCAGATTGAAGGT...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATTGGCCAGATGGGTTCTaGAATGAGGCTTCTGCTACT +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHWPDGF*NEASAT
Trigger: AGTAGCAGAAGCCTCATTCCAGAACCCATCTGGCCA...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACATGCTGCTGCTTCTCTaGCCAGATGGGTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: WFKAPATQANDVNGKCHDMLLLL*PDGFWN
Trigger: ATTCCAGAACCCATCTGGCCAGAGAAGCAGCAGCAT...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGGCTGGCAAAACCGGGTaGCCGTTCTTGCACTACTCG +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRAGKTG*PFLHYS
Trigger: CGAGTAGTGCAAGAACGGCCACCCGGTTTTGCCAGC...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATAGCTGGCAAAACCGGGTaGCCGTTCTTGCACTACTCG +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKIAGKTG*PFLHYS
Trigger: CGAGTAGTGCAAGAACGGCCACCCGGTTTTGCCAGC...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 72 bp AGCAAAATCCAAACAGAAGGAACTGAGAGCAACTCATaGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: SKIQTEGTESNS*QEGCQPQECPK
Trigger: CTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAGTTCCTTCTGTTTGGATTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATGAGAGCAGCTGGAAGTaGAGGCTTATTCAAGCTAGG +
Preference number: 4 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNESSWK*RLIQAR
Trigger: CCTAGCTTGAATAAGCCTTCACTTCCAGCTGCTCTC...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGTATAAATCATGTCTaGTCGCTGGGGGTCCAGACT +
Preference number: 4 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTGINHV*SLGVQT
Trigger: AGTCTGGACCCCCAGCGATCAGACATGATTTATACC...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATAATGTTGGGACTGGATaGAGTAGAGCCATTCCCAGT +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHNVGTG*SRAIPS
Trigger: ACTGGGAATGGCTCTACTTCATCCAGTCCCAACATT...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAAAGAAACTGGAGATGTTaGGCAAAATCCAAACAGAAG +
Preference number: 4 (lower is better)
Translates to: LRATHCRRAASLKSVPRQRNWRC*AKSKQK
Trigger: CTTCTGTTTGGATTTTGCTCAACATCTCCAGTTTCT...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTCTAGAGCAGACACCTTaGGTGTTATGCAGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTLEQTP*VLCSGR
Trigger: TCTTCCGCTGCATAACACTCAAGGTGTCTGCTCTAG...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGCTCCCTGGAAAACTGTaGCTATTATCCTGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLLPGKL*LLSWVE
Trigger: TTCTACCCAGGATAATAGTCACAGTTTTCCAGGGAG...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACATCGCTGAGTTACATTTaGTTATGCACCAAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTSLSYI*LCTKVQ
Trigger: TTGGACCTTGGTGCATAAGCAAATGTAACTCAGCGA...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGGAAACAGGGGTAACCTaGATCCAAACGTTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLETGVT*IQTLSV
Trigger: TACAGACAACGTTTGGATGCAGGTTACCCCTGTTTC...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCTCCACGTGGCGGCTCTaGGTGTTACCTGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFSTWRL*VLPAPA
Trigger: AGCTGGGGCAGGTAACACGCAGAGCCGCCACGTGGA...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGATTGCCCACACAAATaGTTTCTTTCAGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHDCPHK*FLSGTR
Trigger: CCTGGTCCCTGAAAGAAAGCATTTGTGTGGGCAATC...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTACTCTCCCCCGCTGCCTaGAAACCAGAGAGGCCAATT +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELLSPAA*KPERPI
Trigger: AATTGGCCTCTCTGGTTTCCAGGCAGCGGGGGAGAG...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CTGAGAGCAACTCATTGCAGGAGGGCTGCCAGCCTCAAGAGTGTCCCAAGGCAACAGTCCATCCTTTCTTaGATTTATAAATCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LRATHCRRAASLKSVPRQQSILS*IYKSGE
Trigger: CTCTCCCGATTTATAAATCCAAGAAAGGATGGACTG...TTGCCTTGGGACACTCTTGAGGCTGGCAGCCCTCCTGCAATGAGTTGCTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCGCAAAGGCTATCCCGTaGCCTGGGAGTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPAKAIP*PGSLHL
Trigger: CAGATGAAGACTCCCAGGCCACGGGATAGCCTTTGC...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGAAAGCCAGCCCTGGGTaGTGGAAGGGAACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRKASPG*WKGTEA
Trigger: TGCTTCAGTTCCCTTCCACCACCCAGGGCTGGCTTT...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACACACAACAATGGTTACTaGCCTTCAAAAGCCGTTACA +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTHNNGY*PSKAVT
Trigger: TGTAACGGCTTTTGAAGGCCAGTAACCATTGTTGTG...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTCACAACAATGGTTACTaGCCTTCAAAAGCCGTTACA +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISHNNGY*PSKAVT
Trigger: TGTAACGGCTTTTGAAGGCCAGTAACCATTGTTGTG...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTACACAACCACAACAATaGTTACTGGCCTTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISTQPQQ*LLAFKS
Trigger: GCTTTTGAAGGCCAGTAACCATTGTTGTGGTTGTGT...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCACCATGCCCTGCCGCTaGAGACAGGAGACAGGCACC +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFTMPCR*RQETGT
Trigger: GGTGCCTGTCTCCTGTCTCCAGCGGCAGGGCATGGT...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATGAACTGTCAGTAAGATaGCAACGTGGGGAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNELSVR*QRGEGC
Trigger: ACACCCTTCCCCACGTTGCCATCTTACTGACAGTTC...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 72 bp ACCTCCTATTCCCTTACCCCTCCTCGGACAGAATTATaGGGTTGGCCACAGTGGAATCAGAACAGGAAACTC +
Preference number: 4 (lower is better)
Translates to: TSYSLTPPRTEL*GWPQWNQNRKL
Trigger: GAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCTGTTGTCGCTCTTCCTaGGGCCTTTCCATGTGTAGC +
Preference number: 4 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPCCRSS*GLSMCS
Trigger: GCTACACATGGAAAGGCCTCAGGAAGAGCGACAACA...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATCTCACAGCAGAAAAGTaGTTCGCAGTCTGTCTTAGC +
Preference number: 4 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNLTAEK*FAVCLS
Trigger: GCTAAGACAGACTGCGAATCACTTTTCTGCTGTGAG...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGACAATAACATCCACATaGCGGCAGAGCCAAGACGCC +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRTITST*RQSQDA
Trigger: GGCGTCTTGGCTCTGCCGTCATGTGGATGTTATTGT...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAAGAAACTGGAGATGTTaGGCAAAATCCAAACAGAAG +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTRNWRC*AKSKQK
Trigger: CTTCTGTTTGGATTTTGCTCAACATCTCCAGTTTCT...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATAAACCATCAGGACCCATaGTGCTTCATTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKINHQDP*CFILAG
Trigger: GCCAGCCAGAATGAAGCATCATGGGTCCTGATGGTT...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAGTAGACCTGTCCATATaGTTTCCATTACAATTCGCT +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTVDLSI*FPLQFA
Trigger: AGCGAATTGTAATGGAAAGCATATGGACAGGTCTAC...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCGTGTCCTCATTGTCCTaGTCACCGCTGGAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLAVSSLS*SPLEVA
Trigger: CGCCACCTCCAGCGGTGAGCAGGACAATGAGGACAC...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTGGAACTACAGATACATaGCTCACTGCGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNAGTTDT*LTAARP
Trigger: TGGCCTGGCCGCAGTGAGGCATGTATCTGTAGTTCC...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCGCCAACAGTGATAAATaGCAGAGAGGGTGTCTCGGC +
Preference number: 4 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPANSDK*QRGCLG
Trigger: GCCGAGACACCCTCTCTGGCATTTATCACTGTTGGC...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCGTGTGGACACCAGGCTaGCAAGAACCATGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFVWTPG*QEPCPA
Trigger: GGCAGGGCATGGTTCTTGGCAGCCTGGTGTCCACAC...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTACCCCCAACGCTAATGTaGCTTATGGGTCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELPPTLM*LMGPWA
Trigger: TGCCCATGGACCCATAAGGCACATTAGCGTTGGGGG...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCTGGCTGGTGGCCCACTaGTCGTACCCCACACACATG +
Preference number: 4 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLAWLVAH*SYPTHM
Trigger: CATGTGTGTGGGGTACGACCAGTGGGCCACCAGCCA...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGCTCTGCTGTTCCATTaGCAACTGAAACATCTGTGG +
Preference number: 4 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTALLFH*QLKHLW
Trigger: CCACAGATGTTTCAGTTGCCAATGGAACAGCAGAGC...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTAACGGACGTGCGACATaGCAACCCACAGGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNANGRAT*QPTGSL
Trigger: GAGACTTCCTGTGGGTTGCCATGTCGCACGTCCGTT...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGTCTTTCTGCTCACCTaGAGAGCTAGAAGATTGCAA +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHVFLLT*RARRLQ
Trigger: TTGCAATCTTCTAGCTCTCCAGGTGAGCAGAAAGAC...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCGACACAGACCGCGAGTaGCCACCGTGTCCCCCAATA +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFDTDRE*PPCPPI
Trigger: TATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTC...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTCAAAGTACGGGGTGGTaGTTCAAAGCCCCAGCAACG +
Preference number: 4 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNAQSTGW*FKAPAT
Trigger: CGTTGCTGGGGCTTTGAACCACCACCCCGTACTTTG...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCGGTCTCTGTGGAAACTaGAGACTAACCGGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPGLCGN*RLTGLQ
Trigger: TTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGACC...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGGGTAGGTGGTCTCTGTaGAAACTGGAGACTAACCGG +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRGRWSL*KLETNR
Trigger: CCGGTTAGTCTCCAGTTTCCACAGAGACCACCTACC...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATAAAGGTGGTGGGTAGGTaGTCTCTGTGGAAACTGGAG +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKIKVVGR*SLWKLE
Trigger: CTCCAGTTTCCACAGAGACCACCTACCCACCACCTT...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATATATTCACCTTCAATCTaGCCTGGCCACTCCCATGGC +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKIYSPSI*PGHSHG
Trigger: GCCATGGGAGTGGCCAGGCCAGATTGAAGGTGAATA...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 72 bp CTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTaGGCCACAGTGGAATCAGAACAGGAAACTCTCACT +
Preference number: 4 (lower is better)
Translates to: LFPYPSSDRIIG*ATVESEQETLT
Trigger: AGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTATCACCACCGGAAGAGTaGAGAAAGCTGGGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELSPPEE*RKLGAL
Trigger: CAAAGCACCCAGCTTTCTTCACTCTTCCGGTGGTGA...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTAGCAAAAGCACTGGCCTaGAACAGGGGTAACCTGCAT +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELAKALA*NRGNLH
Trigger: ATGCAGGTTACCCCTGTTTCAGGCCAGTGCTTTTGC...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCGACTACTTCTATCAGTaGGGACATGATGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPDYFYQ*GHDDGP
Trigger: GGGGCCATCATCATGTCCTCACTGATAGAAGTAGTC...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTCGGCCACTAGTGAAATaGAAAGAGGCCAGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNARPLVK*KEASVH
Trigger: GTGCACACTGGCCTCTTTTCATTTCACTAGTGGCCG...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTTGCCAGAATAAACCTTaGAGCCCCAAACTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTCQNKP*SPKLPR
Trigger: TCTTGGAAGTTTGGGGCTTCAAGGTTTATTCTGGCA...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATAAGCAACGCAGGCCAATaGTGTGAATGGGAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKISNAGQ*CEWEVS
Trigger: TGACACTTCCCATTCACATCATTGGCCTGCGTTGCT...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTAAGATGGGTTCTGGAATaGGGCTTCTGCTACTGCTCC +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELRWVLE*GFCYCS
Trigger: GGAGCAGTAGCAGAAGCCTCATTCCAGAACCCATCT...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGAGAGAGCTCTTTTCTaGAATGCCGTTTTCCGTAGT +
Preference number: 4 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTERALF*NAVFRS
Trigger: ACTACGGAAAACGGCATTGCAGAAAAGAGCTCTCTC...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCACCAGAAGCACGCCTTaGCTGGCATCTGTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLATRSTP*LASVRA
Trigger: TGCTCGCACAGATGCCAGGCAAGGCGTGCTTCTGGT...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATTCCTTTTCCCTCCAATaGCCCAAACAGATGTTCATT +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHSFSLQ*PKQMFI
Trigger: AATGAACATCTGTTTGGGGCATTGGAGGGAAAAGGA...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAATTTCATGTTGGGATTaGCCACACAAATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTISCWD*PHKCFL
Trigger: AAGAAAGCATTTGTGTGGGCAATCCCAACATGAAAT...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCCCGGGTGGCCGTTCTTaGACTACTCGGGTTCTGACT +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFPGGRS*TTRVLT
Trigger: AGTCAGAACCCGAGTAGTGCAAGAACGGCCACCCGG...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATACCACTGAAATGGGTATaGAACCTTAAACCACGGGGC +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKIPLKWV*NLKPRG
Trigger: GCCCCGTGGTTTAAGGTTCCATACCCATTTCAGTGG...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATCAGTCCCCACTGAAATaGGTATGGAACCTTAAACCA +
Preference number: 4 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNQSPLK*VWNLKP
Trigger: TGGTTTAAGGTTCCATACCCATTTCAGTGGGGACTG...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGTTCCTCTGGAGTGCCTaGGATGGTGTTATCCAGGAT +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRFLWSA*DGVIQD
Trigger: ATCCTGGATAACACCATCCCAGGCACTCCAGAGGAA...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTAAAGCCCCTGGACCCTaGAGGTGGCTTATAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNAKAPGP*RWLIGK
Trigger: CTTTCCTATAAGCCACCTCCAGGGTCCAGGGGCTTT...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTCCGAGAATCAGATATTaGCTTCAGGGTCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTPRIRY*LQGPFL
Trigger: AAGGAAAGGACCCTGAAGCCAATATCTGATTCTCGG...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGAAACAAAGTACGGGGTaGTGGTTCAAAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRKQSTG*WFKAPA
Trigger: TGCTGGGGCTTTGAACCACCACCCCGTACTTTGTTT...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCATGCTGCTGCTTCTCTaGCCAGATGGGTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPMLLLL*PDGFWN
Trigger: ATTCCAGAACCCATCTGGCCAGAGAAGCAGCAGCAT...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCTGCCTTATGGGTCCATaGGCAGACGCTGAACGCTGG +
Preference number: 4 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLACLMGP*ADAERW
Trigger: CCAGCGTTCAGCGTCTGCCCATGGACCCATAAGGCA...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATAAAGTTCAAAGCCGTATaGGAAGTCCCCGTTAGTGGA +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKIKFKAV*EVPVSG
Trigger: TCCACTAACGGGGACTTCTCATACGGCTTTGAACTT...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGTCCATTACAATTCGCTaGGTTACATTTGCTTATGCA +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLSITIR*VTFAYA
Trigger: TGCATAAGCAAATGTAACTCAGCGAATTGTAATGGA...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTAATTCTCAAGCAGAGATaGGGCCTGCAAACGGCATCT +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELILKQR*GLQTAS
Trigger: AGATGCCGTTTGCAGGCCTCATCTCTGCTTGAGAAT...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCAGAAAATGGTCCCAATaGGCTGGCTGGTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFRKWSQ*AGWWPT
Trigger: AGTGGGCCACCAGCCAGCTCATTGGGACCATTTTCT...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATACATTTCTGGCGTATTaGGAAAACAGTAATACTAGG +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDTFLAY*ENSNTR
Trigger: CCTAGTATTACTGTTTTCTCAATACGCCAGAAATGT...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATAAATGTTGGGACTGGATaGAGTAGAGCCATTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKINVGTG*SRAIPS
Trigger: ACTGGGAATGGCTCTACTTCATCCAGTCCCAACATT...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATAGTTACATTTGCTTATaGACCAAGGTCCAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDSYICL*TKVQVQ
Trigger: TTGAACTTGGACCTTGGTGCATAAGCAAATGTAACT...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATACAGATGTGTTCTGTGTaGAACAGCTCTGCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKIQMCSV*NSSAVP
Trigger: TGGAACAGCAGAGCTGTTGCACACAGAACACATCTG...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGAGAAGCCATACTTTGTaGTGTCGGGAGGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRRSHTL*CREGRH
Trigger: ATGTCTTCCCTCCCGACAGCACAAAGTATGGCTTCT...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTTCCCAGTACCAAATATaGCATCAAGAACACAGGAGA +
Preference number: 4 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTSQYQI*HQEHRR
Trigger: TCTCCTGTGTTCTTGATGGCATATTTGGTACTGGGA...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTAATCACTCAAGGCTGTaGAGAAAGTACCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTNHSRL*RKYQIQ
Trigger: CTGAATCTGGTACTTTCTGCACAGCCTTGAGTGATT...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATATCCCCTTCAGGTGTGTaGTTAAACCCAAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKISPSGV*LNPRSR
Trigger: TCTGCTTCTTGGGTTTAAGCACACACCTGAAGGGGA...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTAAAGCAAAACCTCTGTaGGAATTTGTTACCATGAAA +
Preference number: 4 (lower is better)
Translates to: NGKCHDTDREWPPCPPISKAKPL*EFVTMK
Trigger: TTTCATGGTAACAAATTCGCACAGAGGTTTTGCTTT...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCCCCCCAACGCTAATGTaGCTTATGGGTCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFPPTLM*LMGPWA
Trigger: TGCCCATGGACCCATAAGGCACATTAGCGTTGGGGG...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTTTCCTCTGGAGTGCCTaGGATGGTGTTATCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNAFLWSA*DGVIQD
Trigger: ATCCTGGATAACACCATCCCAGGCACTCCAGAGGAA...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCGCAAAGGCTATCCCGTaGCCTGGGAGTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLAAKAIP*PGSLHL
Trigger: CAGATGAAGACTCCCAGGCCACGGGATAGCCTTTGC...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCGAGAGAGAAAGCCCCTaGACCCTGGAGGTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFERESP*TLEVAY
Trigger: ATAAGCCACCTCCAGGGTCCAGGGGCTTTCTCTCTC...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 72 bp TGTCCGTATTCACGCTGTCTACATTTCATGTTGGGATaGCCCACACAAATGCTTTCTTTCAGGGACCAGGCA +
Preference number: 4 (lower is better)
Translates to: CPYSRCLHFMLG*PTQMLSFRDQA
Trigger: TGCCTGGTCCCTGAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATACGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 72 bp ACCTCCTGTCCGTATTCACGCTGTCTACATTTCATGTaGGGATTGCCCACACAAATGCTTTCTTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: TSCPYSRCLHFM*GLPTQMLSFRD
Trigger: GTCCCTGAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATACGGACAGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTAATTCACGTGTAACTTaGCCCATGGTTTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNANSRVT*PMVSGL
Trigger: GAGCCCAGAAACCATGGGTCAAGTTACACGTGAATT...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCCACTCCAACAGGAGTTaGAAGGGTAGGGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLAHSNRS*KGRASF
Trigger: GAAGGAAGCCCTACCCTTTCAACTCCTGTTGGAGTG...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCAACCATCAGGACCCATaGTGCTTCATTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLANHQDP*CFILAG
Trigger: GCCAGCCAGAATGAAGCATCATGGGTCCTGATGGTT...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATACTCCCTGGAAAACTGTaGCTATTATCCTGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKILPGKL*LLSWVE
Trigger: TTCTACCCAGGATAATAGTCACAGTTTTCCAGGGAG...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTAAAAGGAGAGTCATTTaGACTGTCAGTAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTKRRVI*TVSKMA
Trigger: TGCCATCTTACTGACAGTTCAAATGACTCTCCTTTT...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATAAAAGGAGAGTCATTTaGACTGTCAGTAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNKRRVI*TVSKMA
Trigger: TGCCATCTTACTGACAGTTCAAATGACTCTCCTTTT...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATGTAGACCTGTCCATATaGTTTCCATTACAATTCGCT +
Preference number: 4 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNVDLSI*FPLQFA
Trigger: AGCGAATTGTAATGGAAAGCATATGGACAGGTCTAC...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATACCTCGTCTTCGTATTTaGCTTCTGTTGAACTTCCAG +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKIPRLRI*LLLNFQ
Trigger: CTGGAAGTTCAACAGAAGGCAAATACGAAGACGAGG...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATTTTAAATCAATGAACTaGAGGTTAGAGAGGCCAACA +
Preference number: 4 (lower is better)
Translates to: WWFKAPATQANDVNGKCHFKSMN*RLERPT
Trigger: TGTTGGCCTCTCTAACCTGCAGTTCATTGATTTAAA...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGGTGATTTGTTCCCTTTaGCCACACCCTTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRVICSL*PHPSSI
Trigger: AATGGAAGAAGGGTGTGGGCAAAGGGAACAAATCAC...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTAGTGGCCAAGAGAAGGTaGAGCCGAGAATCAGATATT +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELVAKRR*SRESDI
Trigger: AATATCTGATTCTCGGCTGCACCTTCTCTTGGCCAC...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCAGTTTACACAGCCGTTaGGGAGAGCAGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFSLHSR*GEQLEV
Trigger: CACTTCCAGCTGCTCTCCCCAACGGCTGTGTAAACT...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTAAGAGTGAAGAAAGCTaGGTGCTTTGCCTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNAKSEES*VLCLVF
Trigger: GAAGACGAGGCAAAGCACCCAGCTTTCTTCACTCTT...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCCAGTCCCCACTGAAATaGGTATGGAACCTTAAACCA +
Preference number: 4 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPQSPLK*VWNLKP
Trigger: TGGTTTAAGGTTCCATACCCATTTCAGTGGGGACTG...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCGACCATGGCCAGCAATaGACACTCTCAAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFDHGQQ*TLSKGK
Trigger: CTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTC...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCATCAGCTTGTGTGACTaGTGCCTTGGGTGGCACTCT +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFISLCD*CLGWHS
Trigger: AGAGTGCCACCCAAGGCACCAGTCACACAAGCTGAT...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATAGTCTTTCTGCTCACCTaGAGAGCTAGAAGATTGCAA +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKIVFLLT*RARRLQ
Trigger: TTGCAATCTTCTAGCTCTCCAGGTGAGCAGAAAGAC...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGTTTTATTTGGATATTTaGTCTTTCTGCTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLFYLDI*SFCSPG
Trigger: TCCAGGTGAGCAGAAAGACCAAATATCCAAATAAAA...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCGGTCTCTGTGGAAACTaGAGACTAACCGGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFGLCGN*RLTGLQ
Trigger: TTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGACC...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCAAGGTGGTGGGTAGGTaGTCTCTGTGGAAACTGGAG +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFKVVGR*SLWKLE
Trigger: CTCCAGTTTCCACAGAGACCACCTACCCACCACCTT...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACATATCATTCCCTCCCTaGAAAACTGTGACTATTATC +
Preference number: 4 (lower is better)
Translates to: WFKAPATQANDVNGKCHDISFPP*KTVTII
Trigger: GATAATAGTCACAGTTTTCCAGGGAGGGAATGATAT...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGTCGCTGAGTTACATTTaGTTATGCACCAAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRSLSYI*LCTKVQ
Trigger: TTGGACCTTGGTGCATAAGCAAATGTAACTCAGCGA...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCAGCAGAGATGAGGCCTaGAAACGGCATCTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFSRDEA*KRHLLA
Trigger: TGCTAAGAGATGCCGTTTGCAGGCCTCATCTCTGCT...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCCTCTTTCCTCTGGAGTaGCTGGGATGGTGTTATCCA +
Preference number: 4 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLALFPLE*LGWCYP
Trigger: TGGATAACACCATCCCAGGCACTCCAGAGGAAAGAG...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCTTCATTCAACATCTGTaGAGGCCTCACCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLAFIQHL*RPHPWP
Trigger: TGGCCATGGGTGAGGCCTGCACAGATGTTGAATGAA...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCAGCTTGTGTGACTGGTaGCTTGGGTGGCACTCTATA +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFSLCDW*LGWHSI
Trigger: TATAGAGTGCCACCCAAGGCACCAGTCACACAAGCT...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCATGAAGCGAGGGCACTaGTTCCTATCTCAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLAMKRGH*FLSQAF
Trigger: AAAGGCCTGAGATAGGAAGCAGTGCCCTCGCTTCAT...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGCTCCAAAGGGAGGACTaGAACTTCAAATTTAGTGAC +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRLQRED*NFKFSD
Trigger: GTCACTAAATTTGAAGTTCCAGTCCTCCCTTTGGAG...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTACCCCTGGATCACCAATaGCTTTCAGGCTTTTATTTG +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELPLDHQ*LSGFYL
Trigger: CAAATAAAAGCCTGAAAGCCATTGGTGATCCAGGGG...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCAAGGGAGTGGGTTTCTaGATGACTAGAGCAGACACC +
Preference number: 4 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLAKGVGF*MTRADT
Trigger: GGTGTCTGCTCTAGTCATCCAGAAACCCACTCCCTT...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGACAGAATTATTGGGTTaGCCACAGTGGAATCAGAAC +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRTELLG*PQWNQN
Trigger: GTTCTGATTCCACTGTGGCCAACCCAATAATTCTGT...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTTCATTCTGGCTGGCATaGTTAAAGCCACTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNASFWLA*LKPLLL
Trigger: CAAGAGAAGTGGCTTTAACCATGCCAGCCAGAATGA...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCTGGCCAGATGGGTTCTaGAATGAGGCTTCTGCTACT +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFWPDGF*NEASAT
Trigger: AGTAGCAGAAGCCTCATTCCAGAACCCATCTGGCCA...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR TCA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTACTTCCAGCCTCCATTaGTTTGGATGTGGTATTCTT +
Preference number: 4 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNATSSLH*FGCGIL
Trigger: AAGAATACCACATCCAAATCAATGGAGGCTGGAAGT...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTATCCCAGTACCAAATATaGCATCAAGAACACAGGAGA +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELSQYQI*HQEHRR
Trigger: TCTCCTGTGTTCTTGATGGCATATTTGGTACTGGGA...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCGATTGCCCACACAAATaGTTTCTTTCAGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLADCPHK*FLSGTR
Trigger: CCTGGTCCCTGAAAGAAAGCATTTGTGTGGGCAATC...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGAGGAACATCTTCTATaGTATAAATCATGTCTGATC +
Preference number: 4 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTEEHLL*YKSCLI
Trigger: GATCAGACATGATTTATACCATAGAAGATGTTCCTC...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTAGTCTACATTTCATGTTaGGATTGCCCACACAAATGC +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELVYISC*DCPHKC
Trigger: GCATTTGTGTGGGCAATCCCAACATGAAATGTAGAC...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
3UTR CAA 72 bp TATTTGGTCTTTCTGCTCACCTGGAGAGCTAGAAGATaGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: YLVFLLTWRARR*QISGMFSSFPH
Trigger: ATGGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGAGCAGAAAGACCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCGAAACAGGGGTAACCTaGATCCAAACGTTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLAETGVT*IQTLSV
Trigger: TACAGACAACGTTTGGATGCAGGTTACCCCTGTTTC...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTCAGCCTCCATTGATTTaGATGTGGTATTCTTACCAA +
Preference number: 4 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNAQPPLI*MWYSYQ
Trigger: TTGGTAAGAATACCACATCCAAATCAATGGAGGCTG...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTCAGTCCATCCTTTCTTaGATTTATAAATCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNAQSILS*IYKSGE
Trigger: CTCTCCCGATTTATAAATCCAAGAAAGGATGGACTG...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATAAATGTTCATGCCAAATaGCAAATTGTACGACTCCAT +
Preference number: 4 (lower is better)
Translates to: SLWKLETNRPARTFTSKINVHAK*QIVRLH
Trigger: ATGGAGTCGTACAATTTGCCATTTGGCATGAACATT...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TTCAAATTTAGTGACCATGGCCAGCAATGGACACTCTCAAAGGGCAAGGAGTTAAGTTACATTTGCTTATaGACCAAGGTCCAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: FKFSDHGQQWTLSKGKELSYICL*TKVQVQ
Trigger: TTGAACTTGGACCTTGGTGCATAAGCAAATGTAACT...TAACTCCTTGCCCTTTGAGAGTGTCCATTGCTGGCCATGGTCACTAAATTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCACACAACCACAACAATaGTTACTGGCCTTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFTQPQQ*LLAFKS
Trigger: GCTTTTGAAGGCCAGTAACCATTGTTGTGGTTGTGT...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGTTTTATTTGGATATTTaGTCTTTCTGCTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRFYLDI*SFCSPG
Trigger: TCCAGGTGAGCAGAAAGACCAAATATCCAAATAAAA...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCCAGCCTCCATTGATTTaGATGTGGTATTCTTACCAA +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFQPPLI*MWYSYQ
Trigger: TTGGTAAGAATACCACATCCAAATCAATGGAGGCTG...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCTTTAAATCAATGAACTaGAGGTTAGAGAGGCCAACA +
Preference number: 4 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLAFKSMN*RLERPT
Trigger: TGTTGGCCTCTCTAACCTGCAGTTCATTGATTTAAA...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR GCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCATTTCATGTTGGGATTaGCCACACAAATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFISCWD*PHKCFL
Trigger: AAGAAAGCATTTGTGTGGGCAATCCCAACATGAAAT...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CCA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCAATGTTCATGCCAAATaGCAAATTGTACGACTCCAT +
Preference number: 4 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFNVHAK*QIVRLH
Trigger: ATGGAGTCGTACAATTTGCCATTTGGCATGAACATT...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS GCA 90 bp GAGGGCGCTGAACTTCCCGATCATGCCCAGAGCGAGCATGAGGGCTaGTCCGCACTGTATCACGCGGCGGCTGCCGACCTTTGTAATTCC +
Preference number: 5 (lower is better)
Translates to: EGAELPDHAQSEHEG*SALYHAAAADLCNS
Trigger: GGAATTACAAAGGTCGGCAGCCGCCGCGTGATACAGTGCGGAGCAGCCCTCATGCTCGCTCTGGGCATGATCGGGAAGTTCAGCGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000423430.1
CDS CCA 90 bp CACTGCGGCCAGGCCACAGGGCACAGCAAAGGCTATCCCGTGGCCTaGGAGTCTTCATCTGAACTCCGGCTGTTGTCGCTCTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: HCGQATGHSKGYPVA*ESSSELRLLSLFLR
Trigger: CCTCAGGAAGAGCGACAACAGCCGGAGTTCAGATGAAGACTCCCAGGCCACGGGATAGCCTTTGCTGTGCCCTGTGGCCTGGCCGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS CCA 90 bp TGCCTCACTGCGGCCAGGCCACAGGGCACAGCAAAGGCTATCCCGTaGCCTGGGAGTCTTCATCTGAACTCCGGCTGTTGTCGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: CLTAARPQGTAKAIP*PGSLHLNSGCCRSS
Trigger: GGAAGAGCGACAACAGCCGGAGTTCAGATGAAGACTCCCAGGCCACGGGATAGCCTTTGCTGTGCCCTGTGGCCTGGCCGCAGTGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACTACCAGAAGCACGCCTaGCCTGGCATCTGTGCGAGC +
Preference number: 5 (lower is better)
Translates to: APWRSELCECSGPEPHTNYQKHA*PGICAS
Trigger: GCTCGCACAGATGCCAGGCAAGGCGTGCTTCTGGTA...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGTACCAGAAGCACGCCTaGCCTGGCATCTGTGCGAGC +
Preference number: 5 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWYQKHA*PGICAS
Trigger: GCTCGCACAGATGCCAGGCAAGGCGTGCTTCTGGTA...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGCTCAGTGTCCTCATaGTCCTGCTCACCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADSSVSS*SCSPLE
Trigger: CTCCAGCGGTGAGCAGGACAATGAGGACACTGAGCT...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGATGCCGTCGAGTGATTaGTTCCCTTTGCCCACACCC +
Preference number: 5 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMMPSSD*FPLPTP
Trigger: GGGTGTGGGCAAAGGGAACAAATCACTCGACGGCAT...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACGTGAGAGGGAGCCTGTaGGCTGCTTTTCTTATCACC +
Preference number: 5 (lower is better)
Translates to: APWRSELCECSGPEPHTNVRGSL*AAFLIT
Trigger: GGTGATAAGAAAAGCAGCCAACAGGCTCCCTCTCAC...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACCACATGTTAGCGGGGTaGAATCCTCCTGATACAACC +
Preference number: 5 (lower is better)
Translates to: APWRSELCECSGPEPHTNHMLAG*NPPDTT
Trigger: GGTTGTATCAGGAGGATTCAACCCCGCTAACATGTG...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS TCA 90 bp CACAGGGCACAGCAAAGGCTATCCCGTGGCCTGGGAGTCTTCATCTaGACTCCGGCTGTTGTCGCTCTTCCTGAGGCCTTTCCATGTGTA +
Preference number: 5 (lower is better)
Translates to: HRAQQRLSRGLGVFI*TPAVVALPEAFPCV
Trigger: TACACATGGAAAGGCCTCAGGAAGAGCGACAACAGCCGGAGTTCAGATGAAGACTCCCAGGCCACGGGATAGCCTTTGCTGTGCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS CCA 90 bp CTTATTCAAGCTAGGAGCCCAGGATCAGCCGGCTCTTCTAGTGCCTaGAGCCCCCGATTCTCAAGCAGAGATGAGGCCTGCAAACGGCAT +
Preference number: 5 (lower is better)
Translates to: LIQARSPGSAGSSSA*SPRFSSRDEACKRH
Trigger: ATGCCGTTTGCAGGCCTCATCTCTGCTTGAGAATCGGGGGCTCCAGGCACTAGAAGAGCCGGCTGATCCTGGGCTCCTAGCTTGAATAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS-3UTR CAA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTGCCTCGTCTTCGTATTaGCCTTCTGTTGAACTTCCA +
Preference number: 5 (lower is better)
Translates to: PRLATEARQAGQTGGQTVASSSY*PSVELP
Trigger: TGGAAGTTCAACAGAAGGCAAATACGAAGACGAGGC...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGAAAGCTGGGTGCTTaGCCTCGTCTTCGTATTTGC +
Preference number: 5 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADRKLGA*PRLRIC
Trigger: GCAAATACGAAGACGAGGCAAAGCACCCAGCTTTCT...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACAAGCTCAGTGTCCTCATaGTCCTGCTCACCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTSSVSS*SCSPLE
Trigger: CTCCAGCGGTGAGCAGGACAATGAGGACACTGAGCT...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACATGCCAAATGGCAAATaGTACGACTCCATGCCGTCG +
Preference number: 5 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADMPNGK*YDSMPS
Trigger: CGACGGCATGGAGTCGTACAATTTGCCATTTGGCAT...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTTCTGAACTCCGGCTGTaGTCGCTCTTCCTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: NGKCHDTDREWPPCPPISSELRL*SLFLRP
Trigger: AGGCCTCAGGAAGAGCGACAACAGCCGGAGTTCAGA...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGACCGGGTGGCCGTTCTaGCACTACTCGGGTTCTGAC +
Preference number: 5 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLTGWPF*HYSGSD
Trigger: GTCAGAACCCGAGTAGTGCAAGAACGGCCACCCGGT...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS GCA 90 bp AAGCCGTATGAGAAGTCCCCGTTAGTGGAGTCAAGACCTAGCGTATaGCGTCTGCAAGCTGGGGAACCTGGAAAGCTGGTGGTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: KPYEKSPLVESRPSV*RLQAGEPGKLVVSF
Trigger: GAAGGACACCACCAGCTTTCCAGGTTCCCCAGCTTGCAGACGGCATACGCTAGGTCTTGACTCCACTAACGGGGACTTCTCATACGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379333.5
CDS CCA 90 bp AGCAAAGTAGTGATTCCCACACAGAAGAAAATGGTCCCAATGAGCTaGCTGGTGGCCCACTGGTCGTACCCCACACACATGGCATCGGCC +
Preference number: 5 (lower is better)
Translates to: SKVVIPTQKKMVPMS*LVAHWSYPTHMASA
Trigger: GGCCGATGCCATGTGTGTGGGGTACGACCAGTGGGCCACCAGCCAGCTCATTGGGACCATTTTCTTCTGTGTGGGAATCACTACTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS CCA 90 bp CGTGGGCTCTTGACCCCTCTAGCCATCAGAATACTTACATGGGTATaGAACCTTAAACCACGGGGCTACCAGAAGCACGCCTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: RGLLTPLAIRILTWV*NLKPRGYQKHALPG
Trigger: GCCAGGCAAGGCGTGCTTCTGGTAGCCCCGTGGTTTAAGGTTCCATACCCATGTAAGTATTCTGATGGCTAGAGGGGTCAAGAGCCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496331.1
CDS-3UTR CAA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGCGTATTTGCCTTCTGTaGAACTTCCAGCCTCCATTG +
Preference number: 5 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMRICLL*NFQPPL
Trigger: CAATGGAGGCTGGAAGTTCAACAGAAGGCAAATACG...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGAGCTCTGCTGTTCCATaGGCAACTGAAACATCTGTG +
Preference number: 5 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWSSAVP*ATETSV
Trigger: CACAGATGTTTCAGTTGCCAATGGAACAGCAGAGCT...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAGACCGTTTTGAACAGCTGTAACTaGTACGCAGTCCATCCTTTC +
Preference number: 5 (lower is better)
Translates to: PRLATEARQAGQTGGQTVLNSCN*YAVHPF
Trigger: GAAAGGATGGACTGCGTACAAGTTACAGCTGTTCAA...AACGGTCTGTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGCTTTTCTTATCACCTTaGGCAACCACCCTCACCTGT +
Preference number: 5 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMLFLSP*ATTLTC
Trigger: ACAGGTGAGGGTGGTTGCCAAAGGTGATAAGAAAAG...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACCTGGAGAAGCGAGCTTaGCGAATGCTCAGGCCCGGA +
Preference number: 5 (lower is better)
Translates to: WFKAPATQANDVNGKCHDLEKRA*RMLRPG
Trigger: TCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAG...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS GCA 90 bp GCCCCCTGGATCTCTCGGATCCGGGGATACCAGATGTGTTCTGTGTaGAACAGCTCTGCTGTTCCATTGGCAACTGAAACATCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: APWISRIRGYQMCSV*NSSAVPLATETSVV
Trigger: CACCACAGATGTTTCAGTTGCCAATGGAACAGCAGAGCTGTTGCACACAGAACACATCTGGTATCCCCGGATCCGAGAGATCCAGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
ENST00000496331.1
CDS GCA 90 bp TTTACTTCTTGTTACTCAGCAAGGAACTACAGATACATGCCTCACTaGGGCCAGGCCACAGGGCACAGCAAAGGCTATCCCGTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: FTSCYSARNYRYMPH*GQATGHSKGYPVAW
Trigger: CCAGGCCACGGGATAGCCTTTGCTGTGCCCTGTGGCCTGGCCGCAGTGAGGCATGTATCTGTAGTTCCTTGCTGAGTAACAAGAAGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGGTAATACTAGGAATATaGTCAGCATGGCAATGCCCC +
Preference number: 5 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMVILGI*SAWQCP
Trigger: GGGGCATTGCCATGCTGACAATATTCCTAGTATTAC...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TCCTTAAGCCAAGACTTGCAACAGAAGCCCGGCAAGCGGGACAGACCGGCGGACAAATTCACGTGTAACTaGACCCATGGTTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SLSQDLQQKPGKRDRPADKFTCN*THGFWA
Trigger: AGCCCAGAAACCATGGGTCAAGTTACACGTGAATTT...GTCCGCCGGTCTGTCCCGCTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTTCCTTAAGCCAAGACTaGCAACAGAAGCCCGGCAAG +
Preference number: 5 (lower is better)
Translates to: NGKCHDTDREWPPCPPISSLSQD*QQKPGK
Trigger: CTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp GCTCCCTGGAGAAGCGAGCTTTGCGAATGCTCAGGCCCGGAGCCGCACACTAACTGGAGAGCTAGAAGATaGCAAATCTCTGGGATGTTT +
Preference number: 5 (lower is better)
Translates to: APWRSELCECSGPEPHTNWRARR*QISGMF
Trigger: AAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCA...GTTAGTGTGCGGCTCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS TCA 90 bp GAGAAACGAGTAGTTTACACAGCCGTTGGGGAGAGCAGCTGGAAGTaGAGGCTTATTCAAGCTAGGAGCCCAGGATCAGCCGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: EKRVVYTAVGESSWK*RLIQARSPGSAGSS
Trigger: AGAAGAGCCGGCTGATCCTGGGCTCCTAGCTTGAATAAGCCTTCACTTCCAGCTGCTCTCCCCAACGGCTGTGTAAACTACTCGTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS-3UTR CAA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGTCCTTAAGCCAAGACTaGCAACAGAAGCCCGGCAAG +
Preference number: 5 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLSLSQD*QQKPGK
Trigger: CTTGCCGGGCTTCTGTTGCAAGTCTTGGCTTAAGGA...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTACTAGAGCAGACACCTaGAGTGTTATGCAGCGGAAG +
Preference number: 5 (lower is better)
Translates to: NGKCHDTDREWPPCPPISTRADT*SVMQRK
Trigger: CTTCCGCTGCATAACACTCAAGGTGTCTGCTCTAGT...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CATGACGGCAGAGCCAAGACGCCCATCAGCTTGTGTGACTGGTGCCTTGGGTGGTGTCTACATTTCATGTaGGGATTGCCCACACAAATG +
Preference number: 5 (lower is better)
Translates to: HDGRAKTPISLCDWCLGWCLHFM*GLPTQM
Trigger: CATTTGTGTGGGCAATCCCAACATGAAATGTAGACA...CCACCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTTGGCTCTGCCGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS GCA 90 bp CTATGGTATAAATCATGTCTGATCGCTGGGGGTCCAGACTGCCAGTaGTATCCAGGGTCTCAGCGAGAGAGCTCTTTTCTGCAATGCCGT +
Preference number: 5 (lower is better)
Translates to: LWYKSCLIAGGPDCQ*YPGSQRESSFLQCR
Trigger: ACGGCATTGCAGAAAAGAGCTCTCTCGCTGAGACCCTGGATAGCACTGGCAGTCTGGACCCCCAGCGATCAGACATGATTTATACCATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS-3UTR CAA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACACGTATTTGCCTTCTGTaGAACTTCCAGCCTCCATTG +
Preference number: 5 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTRICLL*NFQPPL
Trigger: CAATGGAGGCTGGAAGTTCAACAGAAGGCAAATACG...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTGCCTCGTCTTCGTATTaGCCTTCTGTTGAACTTCCA +
Preference number: 5 (lower is better)
Translates to: NGKCHDTDREWPPCPPISASSSY*PSVELP
Trigger: TGGAAGTTCAACAGAAGGCAAATACGAAGACGAGGC...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TGGTGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATTGTGTGACTGGTGCCTaGGGTGGCACTCTATACTCA +
Preference number: 5 (lower is better)
Translates to: WWFKAPATQANDVNGKCHCVTGA*GGTLYS
Trigger: TGAGTATAGAGTGCCACCCAAGGCACCAGTCACACA...ATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACACTTTTCTTATCACCTTaGGCAACCACCCTCACCTGT +
Preference number: 5 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTLFLSP*ATTLTC
Trigger: ACAGGTGAGGGTGGTTGCCAAAGGTGATAAGAAAAG...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGGAGAAACTGGAGATGTaGAGCAAAATCCAAACAGAA +
Preference number: 5 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMEKLEM*SKIQTE
Trigger: TTCTGTTTGGATTTTGCTCAACATCTCCAGTTTCTC...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGCTGGAGAAGCGAGCTTaGCGAATGCTCAGGCCCGGA +
Preference number: 5 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRLEKRA*RMLRPG
Trigger: TCCGGGCCTGAGCATTCGCAAAGCTCGCTTCTCCAG...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCACCGGGTGGCCGTTCTaGCACTACTCGGGTTCTGAC +
Preference number: 5 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPTGWPF*HYSGSD
Trigger: GTCAGAACCCGAGTAGTGCAAGAACGGCCACCCGGT...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACCATAGAAGCCATACTTaGTGCTGTCGGGAGGGAAGA +
Preference number: 5 (lower is better)
Translates to: WFKAPATQANDVNGKCHDHRSHT*CCREGR
Trigger: TCTTCCCTCCCGACAGCACAAAGTATGGCTTCTATG...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGCCCAAAACTCCAATGTaGGGACTGGATGAAGTAGAG +
Preference number: 5 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLPKTPM*GLDEVE
Trigger: CTCTACTTCATCCAGTCCCAACATTGGAGTTTTGGG...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGAAGACGCCCATCAGCTaGTGTGACTGGTGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRKTPIS*CDWCLG
Trigger: CCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTT...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCAAGACGCCCATCAGCTaGTGTGACTGGTGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPKTPIS*CDWCLG
Trigger: CCCAAGGCACCAGTCACACAAGCTGATGGGCGTCTT...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGTGAGAGGGAGCCTGTaGGCTGCTTTTCTTATCACC +
Preference number: 5 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTVRGSL*AAFLIT
Trigger: GGTGATAAGAAAAGCAGCCAACAGGCTCCCTCTCAC...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CCGTTCTTGCACTACTCGGGTTCTGACTGCAGGAGGGGCAGAGGGTGGTCGATGCTTGCCAACTTTAAGTaGCTAGTACCAATATTTCAG +
Preference number: 5 (lower is better)
Translates to: PFLHYSGSDCRRGRGWSMLANFK*LVPIFQ
Trigger: CTGAAATATTGGTACTAGCAACTTAAAGTTGGCAAG...CATCGACCACCCTCTGCCCCTCCTGCAGTCAGAACCCGAGTAGTGCAAGAACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS GCA 90 bp CATCTTCTATGGTATAAATCATGTCTGATCGCTGGGGGTCCAGACTaGCAGTGCTATCCAGGGTCTCAGCGAGAGAGCTCTTTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: HLLWYKSCLIAGGPD*QCYPGSQRESSFLQ
Trigger: TTGCAGAAAAGAGCTCTCTCGCTGAGACCCTGGATAGCACTGGCAGTCTGGACCCCCAGCGATCAGACATGATTTATACCATAGAAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS CCA 90 bp GTAGCCCCAGAAATATACACAGGTACCAGGGAGGAACATCTTCTATaGTATAAATCATGTCTGATCGCTGGGGGTCCAGACTGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: VAPEIYTGTREEHLL*YKSCLIAGGPDCQC
Trigger: GCACTGGCAGTCTGGACCCCCAGCGATCAGACATGATTTATACCATAGAAGATGTTCCTCCCTGGTACCTGTGTATATTTCTGGGGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS-3UTR CAA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATTTCGCTGAGTTACATTaGCTTATGCACCAAGGTCCA +
Preference number: 5 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDFAELH*LMHQGP
Trigger: TGGACCTTGGTGCATAAGCAAATGTAACTCAGCGAA...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATAAGGACGTTCAACACTaGATCGATTCCTGTTATCCC +
Preference number: 5 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDKDVQH*IDSCYP
Trigger: GGGATAACAGGAATCGATCAAGTGTTGAACGTCCTT...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTTCTGAACTCCGGCTGTaGTCGCTCTTCCTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNASELRL*SLFLRP
Trigger: AGGCCTCAGGAAGAGCGACAACAGCCGGAGTTCAGA...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGCCGAGAATCAGATATaGGCTTCAGGGTCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTAENQI*ASGSFP
Trigger: AGGAAAGGACCCTGAAGCCAATATCTGATTCTCGGC...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CCTCCTCCGGGAGATCAGCGACAACAGAATCATACTGGGCCAGTCAGTCATGATAAATTCACGTGTAACTaGACCCATGGTTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: PPPGDQRQQNHTGPVSHDKFTCN*THGFWA
Trigger: AGCCCAGAAACCATGGGTCAAGTTACACGTGAATTT...ATCATGACTGACTGGCCCAGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp AATGGGAAGTGTCATGACACAGACCGCGAGTGGCCACCGTGTCCCCCAATATCTATCTGCAGTAAGTTTTaGGCAAAACAATGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: NGKCHDTDREWPPCPPISICSKF*AKQCSG
Trigger: GCCACTGCATTGTTTTGCCAAAAACTTACTGCAGAT...AGATATTGGGGGACACGGTGGCCACTCGCGGTCTGTGTCATGACACTTCCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp GAAGGCCTACAGAGGGCACCCCACATGTTAGCGGGGTTGAATCCTCCTGATACATGGAGAGCTAGAAGATaGCAAATCTCTGGGATGTTT +
Preference number: 5 (lower is better)
Translates to: EGLQRAPHMLAGLNPPDTWRARR*QISGMF
Trigger: AAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCA...TGTATCAGGAGGATTCAACCCCGCTAACATGTGGGGTGCCCTCTGTAGGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTCACATGTTAGCGGGGTaGAATCCTCCTGATACAACC +
Preference number: 5 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTHMLAG*NPPDTT
Trigger: GGTTGTATCAGGAGGATTCAACCCCGCTAACATGTG...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTCCTCGGACAGAATTATaGGGTTGGCCACAGTGGAAT +
Preference number: 5 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTPRTEL*GWPQWN
Trigger: ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGG...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACCCAGCCTCCATTGATTaGGATGTGGTATTCTTACCA +
Preference number: 5 (lower is better)
Translates to: WFKAPATQANDVNGKCHDPASID*DVVFLP
Trigger: TGGTAAGAATACCACATCCAAATCAATGGAGGCTGG...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TTTTCAGGTCAACAGCCTCCTCCTCCGGGAGATCAGCGACAACAGAATCATACTAGCTCTGCTGTTCCATaGGCAACTGAAACATCTGTG +
Preference number: 5 (lower is better)
Translates to: FSGQQPPPPGDQRQQNHTSSAVP*ATETSV
Trigger: CACAGATGTTTCAGTTGCCAATGGAACAGCAGAGCT...AGTATGATTCTGTTGTCGCTGATCTCCCGGAGGAGGAGGCTGTTGACCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CTGTGCAGAAAGTACCAGATTCAGCAGGGGCATCTAGTCAGGCTGCCCTCTTTGTGTCTACATTTCATGTaGGGATTGCCCACACAAATG +
Preference number: 5 (lower is better)
Translates to: LCRKYQIQQGHLVRLPSLCLHFM*GLPTQM
Trigger: CATTTGTGTGGGCAATCCCAACATGAAATGTAGACA...CAAAGAGGGCAGCCTGACTAGATGCCCCTGCTGAATCTGGTACTTTCTGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS TCA 90 bp AATGTTCATGCCAAATGGCAAATTGTACGACTCCATGCCGTCGAGTaGTTTGTTCCCTTTGCCCACACCCTTCTTCCATTTCCGGATTCC +
Preference number: 5 (lower is better)
Translates to: NVHAKWQIVRLHAVE*FVPFAHTLLPFPDS
Trigger: GGAATCCGGAAATGGAAGAAGGGTGTGGGCAAAGGGAACAAATCACTCGACGGCATGGAGTCGTACAATTTGCCATTTGGCATGAACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS CCA 90 bp GATTCCTGTTATCCCTGTGACCAGAGGGTTCTGTCTGAGGTAACTTaGAAGGACGAGCCCAAAGAAGATCGAAAATCCAAGCACAAAGAG +
Preference number: 5 (lower is better)
Translates to: DSCYPCDQRVLSEVT*KDEPKEDRKSKHKE
Trigger: CTCTTTGTGCTTGGATTTTCGATCTTCTTTGGGCTCGTCCTTCCAAGTTACCTCAGACAGAACCCTCTGGTCACAGGGATAACAGGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000423430.1
CDS-3UTR CAA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGAGAAAGCTGGGTGCTTaGCCTCGTCTTCGTATTTGC +
Preference number: 5 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRRKLGA*PRLRIC
Trigger: GCAAATACGAAGACGAGGCAAAGCACCCAGCTTTCT...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATTTGAACAGCTGTAACTaGTACGCAGTCCATCCTTTC +
Preference number: 5 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNLNSCN*YAVHPF
Trigger: GAAAGGATGGACTGCGTACAAGTTACAGCTGTTCAA...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGATGCCAAATGGCAAATaGTACGACTCCATGCCGTCG +
Preference number: 5 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRMPNGK*YDSMPS
Trigger: CGACGGCATGGAGTCGTACAATTTGCCATTTGGCAT...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACATCTGCAGTAAGTTTTaGGCAAAACAATGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: WFKAPATQANDVNGKCHDICSKF*AKQCSG
Trigger: GCCACTGCATTGTTTTGCCAAAAACTTACTGCAGAT...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGACTAGAGCAGACACCTaGAGTGTTATGCAGCGGAAG +
Preference number: 5 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRTRADT*SVMQRK
Trigger: CTTCCGCTGCATAACACTCAAGGTGTCTGCTCTAGT...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACCATTTCATGTTGGGATaGCCCACACAAATGCTTTCT +
Preference number: 5 (lower is better)
Translates to: WFKAPATQANDVNGKCHDHFMLG*PTQMLS
Trigger: AGAAAGCATTTGTGTGGGCAATCCCAACATGAAATG...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATAACTTCCAGCCTCCATaGATTTGGATGTGGTATTCT +
Preference number: 5 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNNFQPP*IWMWYS
Trigger: AGAATACCACATCCAAATCAATGGAGGCTGGAAGTT...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATACCCAAAACTCCAATGTaGGGACTGGATGAAGTAGAG +
Preference number: 5 (lower is better)
Translates to: SLWKLETNRPARTFTSKIPKTPM*GLDEVE
Trigger: CTCTACTTCATCCAGTCCCAACATTGGAGTTTTGGG...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGAGTGATTTGTTCCCTTaGCCCACACCCTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRSDLFP*PTPFFH
Trigger: ATGGAAGAAGGGTGTGGGCAAAGGGAACAAATCACT...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCATGCCGTCGAGTGATTaGTTCCCTTTGCCCACACCC +
Preference number: 5 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLAMPSSD*FPLPTP
Trigger: GGGTGTGGGCAAAGGGAACAAATCACTCGACGGCAT...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TGGTTCAAAGCCCCAGCAACGCAGGCCAATGATGTGAATGGGAAGTGTCATGACGAGAAACTGGAGATGTaGAGCAAAATCCAAACAGAA +
Preference number: 5 (lower is better)
Translates to: WFKAPATQANDVNGKCHDEKLEM*SKIQTE
Trigger: TTCTGTTTGGATTTTGCTCAACATCTCCAGTTTCTC...GTCATGACACTTCCCATTCACATCATTGGCCTGCGTTGCTGGGGCTTTGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp AATTATTGGGTTGGCCACAGTGGAATCAGAACAGGAAACTCTCACTCCAACAGGTTCGCTGAGTTACATTaGCTTATGCACCAAGGTCCA +
Preference number: 5 (lower is better)
Translates to: NYWVGHSGIRTGNSHSNRFAELH*LMHQGP
Trigger: TGGACCTTGGTGCATAAGCAAATGTAACTCAGCGAA...CCTGTTGGAGTGAGAGTTTCCTGTTCTGATTCCACTGTGGCCAACCCAATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TCACCTGGAGAGCTAGAAGATTGCAAATCTCTGGGATGTTTAGCAGTTTTCCCCGACAGAATTATTGGGTaGGCCACAGTGGAATCAGAA +
Preference number: 5 (lower is better)
Translates to: SPGELEDCKSLGCLAVFPDRIIG*ATVESE
Trigger: TTCTGATTCCACTGTGGCCAACCCAATAATTCTGTC...GGGGAAAACTGCTAAACATCCCAGAGATTTGCAATCTTCTAGCTCTCCAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS TCA 90 bp GTGATGTGGCGTAGACCTGTCCATATGCTTTCCATTACAATTCGCTaGGTTACATTTGCTTATGCACCAAGGTCCAAGTTCAAAGCCGTA +
Preference number: 5 (lower is better)
Translates to: VMWRRPVHMLSITIR*VTFAYAPRSKFKAV
Trigger: TACGGCTTTGAACTTGGACCTTGGTGCATAAGCAAATGTAACTCAGCGAATTGTAATGGAAAGCATATGGACAGGTCTACGCCACATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS GCA 90 bp AATCCAAGCACAAAGAGGTTCCGGGAAGAATTTAAATCAATGAACTaGAGGTTAGAGAGGCCAACAGCTGTGATCATTCCAAAGAGCGTG +
Preference number: 5 (lower is better)
Translates to: NPSTKRFREEFKSMN*RLERPTAVIIPKSV
Trigger: CACGCTCTTTGGAATGATCACAGCTGTTGGCCTCTCTAACCTGCAGTTCATTGATTTAAATTCTTCCCGGAACCTCTTTGTGCTTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000423430.1
CDS-3UTR CAA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCCATAGAAGCCATACTTaGTGCTGTCGGGAGGGAAGA +
Preference number: 5 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFHRSHT*CCREGR
Trigger: TCTTCCCTCCCGACAGCACAAAGTATGGCTTCTATG...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCGCCGAGAATCAGATATaGGCTTCAGGGTCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFAENQI*ASGSFP
Trigger: AGGAAAGGACCCTGAAGCCAATATCTGATTCTCGGC...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TCAAAAGCCGTTACAACAAGCTTCCCTGATGGTGTCCACAGCTTTACAAATGCTGACAGAATTATTGGGTaGGCCACAGTGGAATCAGAA +
Preference number: 5 (lower is better)
Translates to: SKAVTTSFPDGVHSFTNADRIIG*ATVESE
Trigger: TTCTGATTCCACTGTGGCCAACCCAATAATTCTGTC...AGCATTTGTAAAGCTGTGGACACCATCAGGGAAGCTTGTTGTAACGGCTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCCCTCGGACAGAATTATaGGGTTGGCCACAGTGGAAT +
Preference number: 5 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFPRTEL*GWPQWN
Trigger: ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGG...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TCTCTGTGGAAACTGGAGACTAACCGGCCTGCAAGGACATTCACATCCAAAATACATTTCATGTTGGGATaGCCCACACAAATGCTTTCT +
Preference number: 5 (lower is better)
Translates to: SLWKLETNRPARTFTSKIHFMLG*PTQMLS
Trigger: AGAAAGCATTTGTGTGGGCAATCCCAACATGAAATG...TATTTTGGATGTGAATGTCCTTGCAGGCCGGTTAGTCTCCAGTTTCCACAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TCCTATTCCCTTACCCCTCCTCGGACAGAATTATTGGGTTGGCCACAGTGGAATCTTGCCAACTTTAAGTaGCTAGTACCAATATTTCAG +
Preference number: 5 (lower is better)
Translates to: SYSLTPPRTELLGWPQWNLANFK*LVPIFQ
Trigger: CTGAAATATTGGTACTAGCAACTTAAAGTTGGCAAG...ATTCCACTGTGGCCAACCCAATAATTCTGTCCGAGGAGGGGTAAGGGAATAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCAGTGATTTGTTCCCTTaGCCCACACCCTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLASDLFP*PTPFFH
Trigger: ATGGAAGAAGGGTGTGGGCAAAGGGAACAAATCACT...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCCCAGCCTCCATTGATTaGGATGTGGTATTCTTACCA +
Preference number: 5 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFPASID*DVVFLP
Trigger: TGGTAAGAATACCACATCCAAATCAATGGAGGCTGG...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCGTAATACTAGGAATATaGTCAGCATGGCAATGCCCC +
Preference number: 5 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLAVILGI*SAWQCP
Trigger: GGGGCATTGCCATGCTGACAATATTCCTAGTATTAC...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCAAGGACGTTCAACACTaGATCGATTCCTGTTATCCC +
Preference number: 5 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFKDVQH*IDSCYP
Trigger: GGGATAACAGGAATCGATCAAGTGTTGAACGTCCTT...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp TATTCACGCTGTCTACATTTCATGTTGGGATTGCCCACACAAATGCTTTCTTTCGCCACTTCTCTTGCCTaGATCAATCCCAAGAAACTA +
Preference number: 5 (lower is better)
Translates to: YSRCLHFMLGLPTQMLSFATSLA*INPKKL
Trigger: TAGTTTCTTGGGATTGATCAAGGCAAGAGAAGTGGC...GAAAGAAAGCATTTGTGTGGGCAATCCCAACATGAAATGTAGACAGCGTGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS-3UTR CAA 90 bp CACTTTCATGGTATCAAGCAATACAAAACACAACCACAACAATGGTTACTGGCCGCCACTTCTCTTGCCTaGATCAATCCCAAGAAACTA +
Preference number: 5 (lower is better)
Translates to: HFHGIKQYKTQPQQWLLAATSLA*INPKKL
Trigger: TAGTTTCTTGGGATTGATCAAGGCAAGAGAAGTGGC...GGCCAGTAACCATTGTTGTGGTTGTGTTTTGTATTGCTTGATACCATGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS GCA 72 bp GAACTTCCCGATCATGCCCAGAGCGAGCATGAGGGCTaGTCCGCACTGTATCACGCGGCGGCTGCCGACCTT +
Preference number: 6 (lower is better)
Translates to: ELPDHAQSEHEG*SALYHAAAADL
Trigger: AAGGTCGGCAGCCGCCGCGTGATACAGTGCGGAGCAGCCCTCATGCTCGCTCTGGGCATGATCGGGAAGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000423430.1
CDS CCA 72 bp GCTAGGAGCCCAGGATCAGCCGGCTCTTCTAGTGCCTaGAGCCCCCGATTCTCAAGCAGAGATGAGGCCTGC +
Preference number: 6 (lower is better)
Translates to: ARSPGSAGSSSA*SPRFSSRDEAC
Trigger: GCAGGCCTCATCTCTGCTTGAGAATCGGGGGCTCCAGGCACTAGAAGAGCCGGCTGATCCTGGGCTCCTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS CCA 72 bp GCGGCCAGGCCACAGGGCACAGCAAAGGCTATCCCGTaGCCTGGGAGTCTTCATCTGAACTCCGGCTGTTGT +
Preference number: 6 (lower is better)
Translates to: AARPQGTAKAIP*PGSLHLNSGCC
Trigger: ACAACAGCCGGAGTTCAGATGAAGACTCCCAGGCCACGGGATAGCCTTTGCTGTGCCCTGTGGCCTGGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS CCA 72 bp CAGGCCACAGGGCACAGCAAAGGCTATCCCGTGGCCTaGGAGTCTTCATCTGAACTCCGGCTGTTGTCGCTC +
Preference number: 6 (lower is better)
Translates to: QATGHSKGYPVA*ESSSELRLLSL
Trigger: GAGCGACAACAGCCGGAGTTCAGATGAAGACTCCCAGGCCACGGGATAGCCTTTGCTGTGCCCTGTGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS GCA 72 bp ACGGGGCTACCAGAAGCACGCCTTGCCTGGCATCTGTaGGAGCATAGAAGCCATACTTTGTGCTGTCGGGAG +
Preference number: 6 (lower is better)
Translates to: TGLPEARLAWHL*EHRSHTLCCRE
Trigger: CTCCCGACAGCACAAAGTATGGCTTCTATGCTCGCACAGATGCCAGGCAAGGCGTGCTTCTGGTAGCCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000423430.1
ENST00000468355.5
ENST00000496331.1
CDS CCA 72 bp AAGAAAATGGTCCCAATGAGCTGGCTGGTGGCCCACTaGTCGTACCCCACACACATGGCATCGGCCAACAGG +
Preference number: 6 (lower is better)
Translates to: KKMVPMSWLVAH*SYPTHMASANR
Trigger: CCTGTTGGCCGATGCCATGTGTGTGGGGTACGACCAGTGGGCCACCAGCCAGCTCATTGGGACCATTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS TCA 72 bp AGGCAGGCCGAGGAGGCCGATGACTACTTCTATCAGTaGGGACATGATGATGGCCCCCTGGATCTCTCGGAT +
Preference number: 6 (lower is better)
Translates to: RQAEEADDYFYQ*GHDDGPLDLSD
Trigger: ATCCGAGAGATCCAGGGGGCCATCATCATGTCCTCACTGATAGAAGTAGTCATCGGCCTCCTCGGCCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
ENST00000496331.1
CDS TCA 72 bp CAGCAAAGGCTATCCCGTGGCCTGGGAGTCTTCATCTaGACTCCGGCTGTTGTCGCTCTTCCTGAGGCCTTT +
Preference number: 6 (lower is better)
Translates to: QQRLSRGLGVFI*TPAVVALPEAF
Trigger: AAAGGCCTCAGGAAGAGCGACAACAGCCGGAGTTCAGATGAAGACTCCCAGGCCACGGGATAGCCTTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS GCA 72 bp GAGAAGTCCCCGTTAGTGGAGTCAAGACCTAGCGTATaGCGTCTGCAAGCTGGGGAACCTGGAAAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: EKSPLVESRPSV*RLQAGEPGKLV
Trigger: CACCAGCTTTCCAGGTTCCCCAGCTTGCAGACGGCATACGCTAGGTCTTGACTCCACTAACGGGGACTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379333.5
CDS GCA 72 bp AATACTAGGAATATTGTCAGCATGGCAATGCCCCAGTaGTTCCCGGCTCTCTCCCCCGCTGCCTGGAAACCA +
Preference number: 6 (lower is better)
Translates to: NTRNIVSMAMPQ*FPALSPAAWKP
Trigger: TGGTTTCCAGGCAGCGGGGGAGAGAGCCGGGAAGCACTGGGGCATTGCCATGCTGACAATATTCCTAGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
ENST00000496331.1
CDS CCA 72 bp GTGATTCCCACACAGAAGAAAATGGTCCCAATGAGCTaGCTGGTGGCCCACTGGTCGTACCCCACACACATG +
Preference number: 6 (lower is better)
Translates to: VIPTQKKMVPMS*LVAHWSYPTHM
Trigger: CATGTGTGTGGGGTACGACCAGTGGGCCACCAGCCAGCTCATTGGGACCATTTTCTTCTGTGTGGGAATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS CCA 72 bp AGTCAAGACCGTATGCCGTCTGCAAGCTGGGGAACCTaGAAAGCTGGTGGTGTCCTTCACCCTGAGTCTGAA +
Preference number: 6 (lower is better)
Translates to: SQDRMPSASWGT*KAGGVLHPESE
Trigger: TTCAGACTCAGGGTGAAGGACACCACCAGCTTTCCAGGTTCCCCAGCTTGCAGACGGCATACGGTCTTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468355.5
CDS TCA 72 bp GTAGTTTACACAGCCGTTGGGGAGAGCAGCTGGAAGTaGAGGCTTATTCAAGCTAGGAGCCCAGGATCAGCC +
Preference number: 6 (lower is better)
Translates to: VVYTAVGESSWK*RLIQARSPGSA
Trigger: GGCTGATCCTGGGCTCCTAGCTTGAATAAGCCTTCACTTCCAGCTGCTCTCCCCAACGGCTGTGTAAACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS TCA 72 bp AGTCTTCATCTGAACTCCGGCTGTTGTCGCTCTTCCTaGGGCCTTTCCATGTGTAGCCCACAAAGGTTGGGC +
Preference number: 6 (lower is better)
Translates to: SLHLNSGCCRSS*GLSMCSPQRLG
Trigger: GCCCAACCTTTGTGGGCTACACATGGAAAGGCCTCAGGAAGAGCGACAACAGCCGGAGTTCAGATGAAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS TCA 72 bp AAGCTGGTGGTGTCCTTCACCCTGAGTCTGAAGATCTaGGTTCCTGGAGCTGTGATGTCCAAGGGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: KLVVSFTLSLKI*VPGAVMSKGRR
Trigger: TCTCCTGCCCTTGGACATCACAGCTCCAGGAACTCAGATCTTCAGACTCAGGGTGAAGGACACCACCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379333.5
CDS GCA 72 bp AAATCATGTCTGATCGCTGGGGGTCCAGACTGCCAGTaGTATCCAGGGTCTCAGCGAGAGAGCTCTTTTCTG +
Preference number: 6 (lower is better)
Translates to: KSCLIAGGPDCQ*YPGSQRESSFL
Trigger: CAGAAAAGAGCTCTCTCGCTGAGACCCTGGATAGCACTGGCAGTCTGGACCCCCAGCGATCAGACATGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS GCA 72 bp TGGTATAAATCATGTCTGATCGCTGGGGGTCCAGACTaGCAGTGCTATCCAGGGTCTCAGCGAGAGAGCTCT +
Preference number: 6 (lower is better)
Translates to: WYKSCLIAGGPD*QCYPGSQRESS
Trigger: AGAGCTCTCTCGCTGAGACCCTGGATAGCACTGGCAGTCTGGACCCCCAGCGATCAGACATGATTTATACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS CAA 72 bp TGGAACCTTAAACCACGGGGCTACCAGAAGCACGCCTaGCCTGGCATCTGTGCGAGCATAGAAGCCATACTT +
Preference number: 6 (lower is better)
Translates to: WNLKPRGYQKHA*PGICASIEAIL
Trigger: AAGTATGGCTTCTATGCTCGCACAGATGCCAGGCAAGGCGTGCTTCTGGTAGCCCCGTGGTTTAAGGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000423430.1
ENST00000468355.5
ENST00000496331.1
CDS CAA 90 bp ACATGGGTATGGAACCTTAAACCACGGGGCTACCAGAAGCACGCCTaGCCTGGCATCTGTGCGAGCATAGAAGCCATACTTTGTGCTGTC +
Preference number: 6 (lower is better)
Translates to: TWVWNLKPRGYQKHA*PGICASIEAILCAV
Trigger: GACAGCACAAAGTATGGCTTCTATGCTCGCACAGATGCCAGGCAAGGCGTGCTTCTGGTAGCCCCGTGGTTTAAGGTTCCATACCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496331.1
CDS CAA 90 bp AAATGGGTATGGAACCTTAAACCACGGGGCTACCAGAAGCACGCCTaGCCTGGCATCTGTGCGAGCATAGAAGCCATACTTTGTGCTGTC +
Preference number: 6 (lower is better)
Translates to: KWVWNLKPRGYQKHA*PGICASIEAILCAV
Trigger: GACAGCACAAAGTATGGCTTCTATGCTCGCACAGATGCCAGGCAAGGCGTGCTTCTGGTAGCCCCGTGGTTTAAGGTTCCATACCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000423430.1
ENST00000468355.5
CDS CCA 72 bp GGTGTCCTTCACCCTGAGTCTGAAGATCTGAGTTCCTaGAGCTGTGATGTCCAAGGGCAGGAGAAGATGAAT +
Preference number: 6 (lower is better)
Translates to: GVLHPESEDLSS*SCDVQGQEKMN
Trigger: ATTCATCTTCTCCTGCCCTTGGACATCACAGCTCCAGGAACTCAGATCTTCAGACTCAGGGTGAAGGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379333.5
CDS CCA 72 bp TTGACCCCTCTAGCCATCAGAATACTTACATGGGTATaGAACCTTAAACCACGGGGCTACCAGAAGCACGCC +
Preference number: 6 (lower is better)
Translates to: LTPLAIRILTWV*NLKPRGYQKHA
Trigger: GGCGTGCTTCTGGTAGCCCCGTGGTTTAAGGTTCCATACCCATGTAAGTATTCTGATGGCTAGAGGGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496331.1
CDS CAA 90 bp ATCACGCGGCGGCTGCCGACCTTTGTAATTCCCAAAACTCCAATGTaGGGACTGGATGAAGTAGAGCCATTCCCAGTACCAAATATGCCA +
Preference number: 6 (lower is better)
Translates to: ITRRLPTFVIPKTPM*GLDEVEPFPVPNMP
Trigger: TGGCATATTTGGTACTGGGAATGGCTCTACTTCATCCAGTCCCAACATTGGAGTTTTGGGAATTACAAAGGTCGGCAGCCGCCGCGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000423430.1
CDS CCA 72 bp GCCTCCATTTATCACCACCGGAAGAGTGAAGAAAGCTaGGTGCTTTGCCTCGTCTTCGTATTTGCCTTCTGT +
Preference number: 6 (lower is better)
Translates to: ASIYHHRKSEES*VLCLVFVFAFC
Trigger: ACAGAAGGCAAATACGAAGACGAGGCAAAGCACCCAGCTTTCTTCACTCTTCCGGTGGTGATAAATGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS CCA 72 bp ATGCATCAAACAGTCGCTAGAGTCCTGCTGCTTGGCTaGGCTCCTGCTGAAACTCTTGGTTTTGTCTTCAAG +
Preference number: 6 (lower is better)
Translates to: MHQTVARVLLLG*APAETLGFVFK
Trigger: CTTGAAGACAAAACCAAGAGTTTCAGCAGGAGCCCAGCCAAGCAGCAGGACTCTAGCGACTGTTTGATGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468355.5
CDS CAA 72 bp CGGCTGCCGACCTTTGTAATTCCCAAAACTCCAATGTaGGGACTGGATGAAGTAGAGCCATTCCCAGTACCA +
Preference number: 6 (lower is better)
Translates to: RLPTFVIPKTPM*GLDEVEPFPVP
Trigger: TGGTACTGGGAATGGCTCTACTTCATCCAGTCCCAACATTGGAGTTTTGGGAATTACAAAGGTCGGCAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000423430.1
CDS CAA 72 bp TTGTACGACTCCATGCCGTCGAGTGATTTGTTCCCTTaGCCCACACCCTTCTTCCATTTCCGGATTCCTCTT +
Preference number: 6 (lower is better)
Translates to: LYDSMPSSDLFP*PTPFFHFRIPL
Trigger: AAGAGGAATCCGGAAATGGAAGAAGGGTGTGGGCAAAGGGAACAAATCACTCGACGGCATGGAGTCGTACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS CAA 90 bp AATGGCAAATTGTACGACTCCATGCCGTCGAGTGATTTGTTCCCTTaGCCCACACCCTTCTTCCATTTCCGGATTCCTCTTTCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: NGKLYDSMPSSDLFP*PTPFFHFRIPLSSG
Trigger: TCCAGAGGAAAGAGGAATCCGGAAATGGAAGAAGGGTGTGGGCAAAGGGAACAAATCACTCGACGGCATGGAGTCGTACAATTTGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS TCA 72 bp GCCAAATGGCAAATTGTACGACTCCATGCCGTCGAGTaGTTTGTTCCCTTTGCCCACACCCTTCTTCCATTT +
Preference number: 6 (lower is better)
Translates to: AKWQIVRLHAVE*FVPFAHTLLPF
Trigger: AAATGGAAGAAGGGTGTGGGCAAAGGGAACAAATCACTCGACGGCATGGAGTCGTACAATTTGCCATTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS TCA 72 bp TTTGCTTATGCACCAAGGTCCAAGTTCAAAGCCGTATaGGAAGTCCCCGTTAGTGGAGTCAAGACCGTATGC +
Preference number: 6 (lower is better)
Translates to: FAYAPRSKFKAV*EVPVSGVKTVC
Trigger: GCATACGGTCTTGACTCCACTAACGGGGACTTCTCATACGGCTTTGAACTTGGACCTTGGTGCATAAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468355.5
CDS CCA 72 bp TATCCCTGTGACCAGAGGGTTCTGTCTGAGGTAACTTaGAAGGACGAGCCCAAAGAAGATCGAAAATCCAAG +
Preference number: 6 (lower is better)
Translates to: YPCDQRVLSEVT*KDEPKEDRKSK
Trigger: CTTGGATTTTCGATCTTCTTTGGGCTCGTCCTTCCAAGTTACCTCAGACAGAACCCTCTGGTCACAGGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000423430.1
CDS CAA 90 bp ACCGGAAGAGTGAAGAAAGCTGGGTGCTTTGCCTCGTCTTCGTATTaGCCTTCTGTTGAACTTCCAGCCTCCATTGATTTGGATGTGGTA +
Preference number: 6 (lower is better)
Translates to: TGRVKKAGCFASSSY*PSVELPASIDLDVV
Trigger: TACCACATCCAAATCAATGGAGGCTGGAAGTTCAACAGAAGGCAAATACGAAGACGAGGCAAAGCACCCAGCTTTCTTCACTCTTCCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS CAA 90 bp TTCATGCCAAATGGCAAATTGTACGACTCCATGCCGTCGAGTGATTaGTTCCCTTTGCCCACACCCTTCTTCCATTTCCGGATTCCTCTT +
Preference number: 6 (lower is better)
Translates to: FMPNGKLYDSMPSSD*FPLPTPFFHFRIPL
Trigger: AAGAGGAATCCGGAAATGGAAGAAGGGTGTGGGCAAAGGGAACAAATCACTCGACGGCATGGAGTCGTACAATTTGCCATTTGGCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS GCA 72 bp CCATTTATCACCACCGGAAGAGTGAAGAAAGCTGGGTaGTTTGCCTCGTCTTCGTATTTGCCTTCTGTTGAA +
Preference number: 6 (lower is better)
Translates to: PFITTGRVKKAG*FASSSYLPSVE
Trigger: TTCAACAGAAGGCAAATACGAAGACGAGGCAAAGCACCCAGCTTTCTTCACTCTTCCGGTGGTGATAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS CCA 72 bp CCATCATTAAGAGAAACGAGTAGTTTACACAGCCGTTaGGGAGAGCAGCTGGAAGTGAAGGCTTATTCAAGC +
Preference number: 6 (lower is better)
Translates to: PSLRETSSLHSR*GEQLEVKAYSS
Trigger: GCTTGAATAAGCCTTCACTTCCAGCTGCTCTCCCCAACGGCTGTGTAAACTACTCGTTTCTCTTAATGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS CAA 72 bp CTGGGTGCTTTGCCTCGTCTTCGTATTTGCCTTCTGTaGAACTTCCAGCCTCCATTGATTTGGATGTGGTAT +
Preference number: 6 (lower is better)
Translates to: LGALPRLRICLL*NFQPPLIWMWY
Trigger: ATACCACATCCAAATCAATGGAGGCTGGAAGTTCAACAGAAGGCAAATACGAAGACGAGGCAAAGCACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS CAA 72 bp GTGAAGAAAGCTGGGTGCTTTGCCTCGTCTTCGTATTaGCCTTCTGTTGAACTTCCAGCCTCCATTGATTTG +
Preference number: 6 (lower is better)
Translates to: VKKAGCFASSSY*PSVELPASIDL
Trigger: CAAATCAATGGAGGCTGGAAGTTCAACAGAAGGCAAATACGAAGACGAGGCAAAGCACCCAGCTTTCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS TCA 72 bp ACAAACATAGCAGTTGTGAGAAGGACGTTCAACACTTaGTCGATTCCTGTTATCCCTGTGACCAGAGGGTTC +
Preference number: 6 (lower is better)
Translates to: TNIAVVRRTFNT*SIPVIPVTRGF
Trigger: GAACCCTCTGGTCACAGGGATAACAGGAATCGATCAAGTGTTGAACGTCCTTCTCACAACTGCTATGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS CAA 72 bp CAGATGTGTTCTGTGTGCAACAGCTCTGCTGTTCCATaGGCAACTGAAACATCTGTGGTGTTACATTTCCAT +
Preference number: 6 (lower is better)
Translates to: QMCSVCNSSAVP*ATETSVVLHFH
Trigger: ATGGAAATGTAACACCACAGATGTTTCAGTTGCCAATGGAACAGCAGAGCTGTTGCACACAGAACACATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
ENST00000496331.1
CDS CAA 72 bp TACAAACATAGCAGTTGTGAGAAGGACGTTCAACACTaGATCGATTCCTGTTATCCCTGTGACCAGAGGGTT +
Preference number: 6 (lower is better)
Translates to: YKHSSCEKDVQH*IDSCYPCDQRV
Trigger: AACCCTCTGGTCACAGGGATAACAGGAATCGATCAAGTGTTGAACGTCCTTCTCACAACTGCTATGTTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338244.6
ENST00000379333.5
CDS CAA 90 bp GTAGACCTGTCCATATGCTTTCCATTACAATTCGCTGAGTTACATTaGCTTATGCACCAAGGTCCAAGTTCAAAGCCGTATGAGAAGTCC +
Preference number: 6 (lower is better)
Translates to: VDLSICFPLQFAELH*LMHQGPSSKPYEKS
Trigger: GGACTTCTCATACGGCTTTGAACTTGGACCTTGGTGCATAAGCAAATGTAACTCAGCGAATTGTAATGGAAAGCATATGGACAGGTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS TCA 72 bp CGTAGACCTGTCCATATGCTTTCCATTACAATTCGCTaGGTTACATTTGCTTATGCACCAAGGTCCAAGTTC +
Preference number: 6 (lower is better)
Translates to: RRPVHMLSITIR*VTFAYAPRSKF
Trigger: GAACTTGGACCTTGGTGCATAAGCAAATGTAACTCAGCGAATTGTAATGGAAAGCATATGGACAGGTCTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS GCA 72 bp ACAAAGAGGTTCCGGGAAGAATTTAAATCAATGAACTaGAGGTTAGAGAGGCCAACAGCTGTGATCATTCCA +
Preference number: 6 (lower is better)
Translates to: TKRFREEFKSMN*RLERPTAVIIP
Trigger: TGGAATGATCACAGCTGTTGGCCTCTCTAACCTGCAGTTCATTGATTTAAATTCTTCCCGGAACCTCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000423430.1
CDS CCA 72 bp AGATGTGTTCTGTGTGCAACAGCTCTGCTGTTCCATTaGCAACTGAAACATCTGTGGTGTTACATTTCCATT +
Preference number: 6 (lower is better)
Translates to: RCVLCATALLFH*QLKHLWCYISI
Trigger: AATGGAAATGTAACACCACAGATGTTTCAGTTGCCAATGGAACAGCAGAGCTGTTGCACACAGAACACATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
ENST00000496331.1
CDS GCA 72 bp GCTTTCCATTACAATTCGCTGAGTTACATTTGCTTATaGACCAAGGTCCAAGTTCAAAGCCGTATGAGAAGT +
Preference number: 6 (lower is better)
Translates to: AFHYNSLSYICL*TKVQVQSRMRS
Trigger: ACTTCTCATACGGCTTTGAACTTGGACCTTGGTGCATAAGCAAATGTAACTCAGCGAATTGTAATGGAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS GCA 72 bp CCATATGCTTTCCATTACAATTCGCTGAGTTACATTTaGTTATGCACCAAGGTCCAAGTTCAAAGCCGTATG +
Preference number: 6 (lower is better)
Translates to: PYAFHYNSLSYI*LCTKVQVQSRM
Trigger: CATACGGCTTTGAACTTGGACCTTGGTGCATAAGCAAATGTAACTCAGCGAATTGTAATGGAAAGCATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS CAA 90 bp TCGTCTTCGTATTTGCCTTCTGTTGAACTTCCAGCCTCCATTGATTaGGATGTGGTATTCTTACCAATACCCATCATTAAGAGAAACGAG +
Preference number: 6 (lower is better)
Translates to: SSSYLPSVELPASID*DVVFLPIPIIKRNE
Trigger: CTCGTTTCTCTTAATGATGGGTATTGGTAAGAATACCACATCCAAATCAATGGAGGCTGGAAGTTCAACAGAAGGCAAATACGAAGACGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5
CDS CAA 72 bp TCCATATGCTTTCCATTACAATTCGCTGAGTTACATTaGCTTATGCACCAAGGTCCAAGTTCAAAGCCGTAT +
Preference number: 6 (lower is better)
Translates to: SICFPLQFAELH*LMHQGPSSKPY
Trigger: ATACGGCTTTGAACTTGGACCTTGGTGCATAAGCAAATGTAACTCAGCGAATTGTAATGGAAAGCATATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338244.6
ENST00000379333.5
ENST00000468355.5