RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC23A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000170482

Ensembl transcript IDs: ENST00000348729.8, ENST00000353963.7, ENST00000502863.1, ENST00000503919.1, ENST00000504513.1, ENST00000506512.1, ENST00000508270.1

Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTTCCTGTTATATACCATaGTTCCTTTCCTGGAAGTCA +
Preference number: 2 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVSCYIP*FLSWKS
Trigger: TGACTTCCAGGAAAGGAAGCATGGTATATAACAGGA...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
3UTR-3UTR TCA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACGTTCTTCCTAGATGCTaGCAAGTCTACTTAGGAGAG +
Preference number: 2 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNVLPRC*QVYLGE
Trigger: CTCTCCTAAGTAGACTTGTCAGCATCTAGGAAGAAC...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
3UTR-3UTR TCA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATACTGATGCAAAAATTTaGATCCCAGAGAAAGGTGAC +
Preference number: 2 (lower is better)
Translates to: PCSIPTFQALEPALISFYTDAKI*IPEKGD
Trigger: GTCACCTTTCTCTGGGATTCAAATTTTTGCATCAGT...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
3UTR-3UTR TCA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACACTGATGCAAAAATTTaGATCCCAGAGAAAGGTGAC +
Preference number: 2 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNTDAKI*IPEKGD
Trigger: GTCACCTTTCTCTGGGATTCAAATTTTTGCATCAGT...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
3UTR-3UTR GCA 90 bp AAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCTCCTGTTATATACCATaGTTCCTTTCCTGGAAGTCA +
Preference number: 2 (lower is better)
Translates to: KFNVKALQHTYISGPGTCSCYIP*FLSWKS
Trigger: TGACTTCCAGGAAAGGAAGCATGGTATATAACAGGA...GCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
3UTR-3UTR CAA 90 bp CAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCAAGACATAGCATAACATaGGTACAAGTCTCTAAGACT +
Preference number: 3 (lower is better)
Translates to: QCKSLAAYLHFRPWNLPSRHSIT*VQVSKT
Trigger: AGTCTTAGAGACTTGTACCAATGTTATGCTATGTCT...TGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
3UTR-3UTR CAA 90 bp AGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTAGACATAGCATAACATaGGTACAAGTCTCTAAGACT +
Preference number: 3 (lower is better)
Translates to: SLAAYLHFRPWNLPSFLFRHSIT*VQVSKT
Trigger: AGTCTTAGAGACTTGTACCAATGTTATGCTATGTCT...AAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTATAGCCGCACCATACTaGACCACGCGCCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVIAAPY*TTRRLP
Trigger: GGGCAGCCGGCGCGTGGTGCAGTATGGTGCGGCTAT...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTGCTGAGATGCCCCAGTaGGAGCCAGCTCGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVAEMPQ*EPARSP
Trigger: TGGCGACCGAGCTGGCTCCCACTGGGGCATCTCAGC...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCAGCTGAGATGCCCCAGTaGGAGCCAGCTCGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: QCKSLAAYLHFRPWNLPSAEMPQ*EPARSP
Trigger: TGGCGACCGAGCTGGCTCCCACTGGGGCATCTCAGC...TGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTCCACGCTGGACACCATaGTTGCACCCTGGACCTCCC +
Preference number: 4 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVPRWTP*LHPGPP
Trigger: GGGAGGTCCAGGGTGCAATCATGGTGTCCAGCGTGG...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348729.8
CDS-3UTR TCA 90 bp AGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTCAGGCAGCAGGAAGGTaGGGTTGCGCAGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: SLAAYLHFRPWNLPSFLFQAAGR*GCAGTG
Trigger: CCCAGTACCTGCGCAACCTCACCTTCCTGCTGCCTG...AAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTCTCCGATGGACTCAATaGTGCCTGCCAGAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVLRWTQ*CLPEWR
Trigger: GCGCCACTCTGGCAGGCATCATTGAGTCCATCGGAG...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTTCGAGGGGTCCCTGGTaGTTTCATGCTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVSRGPW*FHAVSG
Trigger: GCCGGACACAGCATGAAACCACCAGGGACCCCTCGA...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATCGAGGGGTCCCTGGTaGTTTCATGCTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: QCKSLAAYLHFRPWNLPSSRGPW*FHAVSG
Trigger: GCCGGACACAGCATGAAACCACCAGGGACCCCTCGA...TGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp AGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTGCAAAGGCACTGGCCTaGAACAGCGGCAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: SLAAYLHFRPWNLPSFLFAKALA*NSGSRM
Trigger: CATCCGGCTGCCGCTGTTCCAGGCCAGTGCCTTTGC...AAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGACAGCCGCAGTCACCGTaGGCAGGCCCCACTGACAGG +
Preference number: 4 (lower is better)
Translates to: RVKFNVKALQHTYISGPGQPQSP*AGPTDR
Trigger: CCTGTCAGTGGGGCCTGCCCACGGTGACTGCGGCTG...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATTGGGACTGGACGAGGTaGACCCGTTGCCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: PCSIPTFQALEPALISFYWDWTR*TRCPCP
Trigger: TGGGCACGGGCAACGGGTCCACCTCGTCCAGTCCCA...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCACCAGGACGCCAATGTTaGGACTGGACGAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: QCKSLAAYLHFRPWNLPSPGRQC*DWTRWT
Trigger: GGTCCACCTCGTCCAGTCCCAACATTGGCGTCCTGG...TGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp AAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCGAGGCCCAATGTAGTTaGGCAGGGCCCCAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KFNVKALQHTYISGPGTCEAQCS*AGPQAA
Trigger: GGCTGCCTGGGGCCCTGCTCAACTACATTGGGCCTC...GCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp AGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTCTGCCAGAGTGGCGCTaGACATTCCCAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: SLAAYLHFRPWNLPSFLFLPEWR*TFPGQQ
Trigger: CTGCTGTCCTGGGAATGTTCAGCGCCACTCTGGCAG...AAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp CAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCACCAATAGCCCCGCGATaGTGCAGCAAATGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: QCKSLAAYLHFRPWNLPSPIAPR*CSKCLR
Trigger: CCGAAGGCATTTGCTGCATCATCGCGGGGCTATTGG...TGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTCCAATAGCCCCGCGATaGTGCAGCAAATGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVPIAPR*CSKCLR
Trigger: CCGAAGGCATTTGCTGCATCATCGCGGGGCTATTGG...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTCCACGCTGGACACCATaGTTGCACCCTGGACATGCA +
Preference number: 4 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVPRWTP*LHPGHA
Trigger: TGCATGTCCAGGGTGCAATCATGGTGTCCAGCGTGG...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353963.7
CDS-3UTR GCA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACGAGGTGGACCCGTTaGCCGTGCCCAATAGCCCCG +
Preference number: 4 (lower is better)
Translates to: RVKFNVKALQHTYISGPGTRWTR*PCPIAP
Trigger: CGGGGCTATTGGGCACGGGCAACGGGTCCACCTCGT...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACACGAGGTGGACCCGTTaGCCGTGCCCAATAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNTRWTR*PCPIAP
Trigger: CGGGGCTATTGGGCACGGGCAACGGGTCCACCTCGT...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATCCCTCGAGGTCCTCCTaGGCCCTCATCTTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: PCSIPTFQALEPALISFYPSRSS*ALIFGA
Trigger: TGCCCCAAAGATGAGGGCCCAGGAGGACCTCGAGGG...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp AGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTGGGTCGAGGGGTCCCTaGTGGTTTCATGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SLAAYLHFRPWNLPSFLFGSRGP*WFHAVS
Trigger: GGACACAGCATGAAACCACCAGGGACCCCTCGACCC...AAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCAATGCCCACGGTGGTCTaGATGAGAGTGGTGATGCCC +
Preference number: 4 (lower is better)
Translates to: QCKSLAAYLHFRPWNLPSMPTVV*MRVVMP
Trigger: GGGCATCACCACTCTCATCCAGACCACCGTGGGCAT...TGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTGAAATGCAAAGGCACTaGCCTGGAACAGCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVEMQRH*PGTAAA
Trigger: GGCTGCCGCTGTTCCAGGCCAGTGCCTTTGCATTTC...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCAACCATGATTGCACCCTaGACCTCCCGTATCCGTGGG +
Preference number: 4 (lower is better)
Translates to: QCKSLAAYLHFRPWNLPSTMIAP*TSRIRG
Trigger: CCCACGGATACGGGAGGTCCAGGGTGCAATCATGGT...TGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348729.8
CDS-3UTR CCA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGATGGGACTGGACGAGGTaGACCCGTTGCCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RVKFNVKALQHTYISGPGWDWTR*TRCPCP
Trigger: TGGGCACGGGCAACGGGTCCACCTCGTCCAGTCCCA...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp AAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCAGGCAGCAGGAAGGTaGGGTTGCGCAGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: KFNVKALQHTYISGPGTCQAAGR*GCAGTG
Trigger: CCCAGTACCTGCGCAACCTCACCTTCCTGCTGCCTG...GCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATCTCCGATGGACTCAATaGTGCCTGCCAGAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: PCSIPTFQALEPALISFYLRWTQ*CLPEWR
Trigger: GCGCCACTCTGGCAGGCATCATTGAGTCCATCGGAG...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACAGGCGAAGAGGGCCGTaGACTTGCCGATGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNRRRGP*TCRWCP
Trigger: TGGGCACCATCGGCAAGTTCACGGCCCTCTTCGCCT...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp AAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCAGGCGAAGAGGGCCGTaGACTTGCCGATGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: KFNVKALQHTYISGPGTCRRRGP*TCRWCP
Trigger: TGGGCACCATCGGCAAGTTCACGGCCCTCTTCGCCT...GCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp CAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCAACGGGCATCGGTTCGTaGCTGGAAGCCATAGGCTTT +
Preference number: 4 (lower is better)
Translates to: QCKSLAAYLHFRPWNLPSTGIGS*LEAIGF
Trigger: AAAGCCTATGGCTTCCAGGCACGAACCGATGCCCGT...TGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGGCAAAGGCACTGGCCTaGAACAGCGGCAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: QIQCKSLAAYLHFRPWNLAKALA*NSGSRM
Trigger: CATCCGGCTGCCGCTGTTCCAGGCCAGTGCCTTTGC...CAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp AGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTGAAATGCAAAGGCACTaGCCTGGAACAGCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SLAAYLHFRPWNLPSFLFEMQRH*PGTAAA
Trigger: GGCTGCCGCTGTTCCAGGCCAGTGCCTTTGCATTTC...AAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTCGGTCGCCAGCAGCTTaGAAGACAGAAAGGCCAATG +
Preference number: 4 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVRSPAA*KTERPM
Trigger: CATTGGCCTTTCTGTCTTCCAAGCTGCTGGCGACCG...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACGAGAATGGAGCAAGCTaGGATGCCCCAGTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNENGAS*DAPVGA
Trigger: GGCTCCCACTGGGGCATCTCAGCTTGCTCCATTCTC...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp CAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGGAGAATGGAGCAAGCTaGGATGCCCCAGTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: QIQCKSLAAYLHFRPWNLENGAS*DAPVGA
Trigger: GGCTCCCACTGGGGCATCTCAGCTTGCTCCATTCTC...CAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCAGAGTGGCGCTaGACATTCCCAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNLPEWR*TFPGQQ
Trigger: CTGCTGTCCTGGGAATGTTCAGCGCCACTCTGGCAG...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp CAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCAGGTAATTGGGCAGCGTaGGCCCGAAGAACATGGAAA +
Preference number: 4 (lower is better)
Translates to: QCKSLAAYLHFRPWNLPSGNWAA*ARRTWK
Trigger: TTTCCATGTTCTTCGGGCTCACGCTGCCCAATTACC...TGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTGGTAATTGGGCAGCGTaGGCCCGAAGAACATGGAAA +
Preference number: 4 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVGNWAA*ARRTWK
Trigger: TTTCCATGTTCTTCGGGCTCACGCTGCCCAATTACC...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTCAAGAATGCCTGTATTaGTGGCGCCAGGGTTGGACT +
Preference number: 4 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVQECLY*WRQGWT
Trigger: AGTCCAACCCTGGCGCCATCAATACAGGCATTCTTG...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp CAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCAGGACTCAATGATGCCTaGCAGAGTGGCGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: QCKSLAAYLHFRPWNLPSGLNDA*QSGAEH
Trigger: ATGTTCAGCGCCACTCTGGCAGGCATCATTGAGTCC...TGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTCCAGCACGAAGAGGTTaGGAGAGGAGTTCATGTCCA +
Preference number: 4 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVPARRG*ERSSCP
Trigger: TGGACATGAACTCCTCTCGCAACCTCTTCGTGCTGG...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp CAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCAGCTGGACACCATGATTaGACCCTGGACATGCAAACC +
Preference number: 4 (lower is better)
Translates to: QCKSLAAYLHFRPWNLPSAGHHD*TLDMQT
Trigger: GGTTTGCATGTCCAGGGTGCAATCATGGTGTCCAGC...TGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353963.7
CDS-3UTR CCA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAGGGTCGAGGGGTCCCTaGTGGTTTCATGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: RVKFNVKALQHTYISGPGGSRGP*WFHAVS
Trigger: GGACACAGCATGAAACCACCAGGGACCCCTCGACCC...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGACCATGTGCTGGTCGTaGCCCACACACAGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: QIQCKSLAAYLHFRPWNLTMCWS*PTHSAS
Trigger: TGAGGCGCTGTGTGTGGGCCACGACCAGCACATGGT...CAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATATGCCCACGGTGGTCTaGATGAGAGTGGTGATGCCC +
Preference number: 4 (lower is better)
Translates to: PCSIPTFQALEPALISFYMPTVV*MRVVMP
Trigger: GGGCATCACCACTCTCATCCAGACCACCGTGGGCAT...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCAGACCTCCCGTATCCGTaGGTGCCAAATATGAGAGGT +
Preference number: 4 (lower is better)
Translates to: QCKSLAAYLHFRPWNLPSDLPYP*VPNMRG
Trigger: ACCTCTCATATTTGGCACCCACGGATACGGGAGGTC...TGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348729.8
CDS-3UTR CCA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTAGGTTGCGCAGGTACTaGGAGAAGAGGATGATCAGG +
Preference number: 4 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVRLRRY*EKRMIR
Trigger: CCTGATCATCCTCTTCTCCCAGTACCTGCGCAACCT...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCGCCAATGTTGGGACTaGACGAGGTGGACCCGTTGC +
Preference number: 4 (lower is better)
Translates to: QIQCKSLAAYLHFRPWNLRQCWD*TRWTRC
Trigger: GCAACGGGTCCACCTCGTCCAGTCCCAACATTGGCG...CAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp AAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCGCCAATGTTGGGACTaGACGAGGTGGACCCGTTGC +
Preference number: 4 (lower is better)
Translates to: KFNVKALQHTYISGPGTCRQCWD*TRWTRC
Trigger: GCAACGGGTCCACCTCGTCCAGTCCCAACATTGGCG...GCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp AAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCGGAAGCCCAGCAGGATaGACAGGTACCAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: KFNVKALQHTYISGPGTCGSPAG*TGTKVA
Trigger: TGCCACCTTGGTACCTGTGCATCCTGCTGGGCTTCC...GCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp CAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGGGAAGCCCAGCAGGATaGACAGGTACCAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QIQCKSLAAYLHFRPWNLGSPAG*TGTKVA
Trigger: TGCCACCTTGGTACCTGTGCATCCTGCTGGGCTTCC...CAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp AGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTGATGCGGATCCAGGGTaGAATAGCCATGATGTCACC +
Preference number: 4 (lower is better)
Translates to: SLAAYLHFRPWNLPSFLFDADPG*NSHDVT
Trigger: GGTGACATCATGGCTATTGCACCCTGGATCCGCATC...AAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp AGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTAGGTTGCGCAGGTACTaGGAGAAGAGGATGATCAGG +
Preference number: 4 (lower is better)
Translates to: SLAAYLHFRPWNLPSFLFRLRRY*EKRMIR
Trigger: CCTGATCATCCTCTTCTCCCAGTACCTGCGCAACCT...AAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATAGGCTTTTGGGTCTGTaGGCAGCACGTCTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: PCSIPTFQALEPALISFYRLLGL*AARLSR
Trigger: CCTTGACAGACGTGCTGCCCACAGACCCAAAAGCCT...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATGTTGATAGCATGTACTaGAGGGGGTGGTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: PCSIPTFQALEPALISFYVDSMY*RGWCTS
Trigger: GCTGGTGCACCACCCCCTCCAGTACATGCTATCAAC...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACATGGTGCCGATGAGCTaGCTAACCATGTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNMVPMS*LTMCWS
Trigger: CGACCAGCACATGGTTAGTCAGCTCATCGGCACCAT...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATCAAGAATGCCTGTATTaGTGGCGCCAGGGTTGGACT +
Preference number: 4 (lower is better)
Translates to: PCSIPTFQALEPALISFYQECLY*WRQGWT
Trigger: AGTCCAACCCTGGCGCCATCAATACAGGCATTCTTG...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATCTGTGTTGTCAAGTATaGAAGCAAGGCACCCGCCCA +
Preference number: 4 (lower is better)
Translates to: PCSIPTFQALEPALISFYLCCQV*KQGTRP
Trigger: TGGGCGGGTGCCTTGCTTTCATACTTGACAACACAG...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATATGTCACTGTTGGCATaGGCCCCAGCTTTCCACTGT +
Preference number: 4 (lower is better)
Translates to: PCSIPTFQALEPALISFYMSLLA*APAFHC
Trigger: ACAGTGGAAAGCTGGGGCTCATGCCAACAGTGACAT...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp AGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTGGAAATCGTAGCTCTTaGGGCTGGAAGACATGTCAC +
Preference number: 4 (lower is better)
Translates to: SLAAYLHFRPWNLPSFLFGNRSS*GWKTCH
Trigger: GTGACATGTCTTCCAGCCTCAAGAGCTACGATTTCC...AAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp AAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCGCTGGACACCATGATTaGACCCTGGACCTCCCGTAT +
Preference number: 4 (lower is better)
Translates to: KFNVKALQHTYISGPGTCAGHHD*TLDLPY
Trigger: ATACGGGAGGTCCAGGGTGCAATCATGGTGTCCAGC...GCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348729.8
CDS-3UTR GCA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTTTCATGTCCACAAATTaGAGGTTGGACAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVFMSTN*RLDSPT
Trigger: TGTGGGGCTGTCCAACCTGCAATTTGTGGACATGAA...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCGGTCGCCAGCAGCTTaGAAGACAGAAAGGCCAATG +
Preference number: 4 (lower is better)
Translates to: QIQCKSLAAYLHFRPWNLRSPAA*KTERPM
Trigger: CATTGGCCTTTCTGTCTTCCAAGCTGCTGGCGACCG...CAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAAGGCTTTTGGGTCTGTaGGCAGCACGTCTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: RVKFNVKALQHTYISGPGRLLGL*AARLSR
Trigger: CCTTGACAGACGTGCTGCCCACAGACCCAAAAGCCT...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACGAAGCCATAGGCTTTTaGGTCTGTGGGCAGCACGTC +
Preference number: 4 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNEAIGF*VCGQHV
Trigger: GACGTGCTGCCCACAGACCCAAAAGCCTATGGCTTC...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp TCAACTTGCAGTCTAAAATATCACAGAGGAAAATTTCTAGCTGTTCTTCCTAGACAGCCGCAGTCACCGTaGGCAGGCCCCACTGACAGG +
Preference number: 4 (lower is better)
Translates to: STCSLKYHRGKFLAVLPRQPQSP*AGPTDR
Trigger: CCTGTCAGTGGGGCCTGCCCACGGTGACTGCGGCTG...TCTAGGAAGAACAGCTAGAAATTTTCCTCTGTGATATTTTAGACTGCAAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAGTTGATAGCATGTACTaGAGGGGGTGGTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: RVKFNVKALQHTYISGPGVDSMY*RGWCTS
Trigger: GCTGGTGCACCACCCCCTCCAGTACATGCTATCAAC...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCACTACATTTCAGGCCCTaGAACCTGCCCTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: QCKSLAAYLHFRPWNLPSLHFRP*NLPSFL
Trigger: AAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAG...TGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGATTTGGGGCACAGGTTTaGGCAGTTCCTGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RVKFNVKALQHTYISGPGFGAQV*AVPEEK
Trigger: CTTCTCCTCAGGAACTGCTCAAACCTGTGCCCCAAA...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp AAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCTTTGGGGCACAGGTTTaGGCAGTTCCTGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: KFNVKALQHTYISGPGTCFGAQV*AVPEEK
Trigger: CTTCTCCTCAGGAACTGCTCAAACCTGTGCCCCAAA...GCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp TCAACTTGCAGTCTAAAATATCACAGAGGAAAATTTCTAGCTGTTCTTCCTAGAGAGGCCCAATGTAGTTaGGCAGGGCCCCAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: STCSLKYHRGKFLAVLPREAQCS*AGPQAA
Trigger: GGCTGCCTGGGGCCCTGCTCAACTACATTGGGCCTC...TCTAGGAAGAACAGCTAGAAATTTTCCTCTGTGATATTTTAGACTGCAAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp AAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCTGTGTTGTCAAGTATaGAAGCAAGGCACCCGCCCA +
Preference number: 4 (lower is better)
Translates to: KFNVKALQHTYISGPGTCLCCQV*KQGTRP
Trigger: TGGGCGGGTGCCTTGCTTTCATACTTGACAACACAG...GCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATGGAAATCGTAGCTCTTaGGGCTGGAAGACATGTCAC +
Preference number: 4 (lower is better)
Translates to: PCSIPTFQALEPALISFYGNRSS*GWKTCH
Trigger: GTGACATGTCTTCCAGCCTCAAGAGCTACGATTTCC...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTGTTCTTCCTAGATGCTaGCAAGTCTACTTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVVLPRC*QVYLGE
Trigger: CTCTCCTAAGTAGACTTGTCAGCATCTAGGAAGAAC...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACGGCTGGAACCAGAAATaGAAAGGCACTGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNGWNQK*KGTGLE
Trigger: TTCCAGGCCAGTGCCTTTGCATTTCTGGTTCCAGCC...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAGGCTGGAACCAGAAATaGAAAGGCACTGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: RVKFNVKALQHTYISGPGGWNQK*KGTGLE
Trigger: TTCCAGGCCAGTGCCTTTGCATTTCTGGTTCCAGCC...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp CAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGGATGCGGATCCAGGGTaGAATAGCCATGATGTCACC +
Preference number: 4 (lower is better)
Translates to: QIQCKSLAAYLHFRPWNLDADPG*NSHDVT
Trigger: GGTGACATCATGGCTATTGCACCCTGGATCCGCATC...CAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAGGACTCAATGATGCCTaGCAGAGTGGCGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: RVKFNVKALQHTYISGPGGLNDA*QSGAEH
Trigger: ATGTTCAGCGCCACTCTGGCAGGCATCATTGAGTCC...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCCAGCACGAAGAGGTTaGGAGAGGAGTTCATGTCCA +
Preference number: 4 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNPARRG*ERSSCP
Trigger: TGGACATGAACTCCTCTCGCAACCTCTTCGTGCTGG...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp AAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCGCACAGGTACCAAGGTaGCACGTCCTCGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: KFNVKALQHTYISGPGTCAQVPR*HVLDLV
Trigger: TACAAGATCGAGGACGTGCCACCTTGGTACCTGTGC...GCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAGCACAGGTACCAAGGTaGCACGTCCTCGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: RVKFNVKALQHTYISGPGAQVPR*HVLDLV
Trigger: TACAAGATCGAGGACGTGCCACCTTGGTACCTGTGC...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp AGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTGAGCCAGTATGGCTTTaGCTGGAACCAGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: SLAAYLHFRPWNLPSFLFEPVWL*LEPEMQ
Trigger: TTGCATTTCTGGTTCCAGCCAAAGCCATACTGGCTC...AAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCAAACATTTTGAAGATCTaGATGCGGAGGAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: QCKSLAAYLHFRPWNLPSNILKI*MRRRVR
Trigger: CCTCACTCTCCTCCGCATCCAGATCTTCAAAATGTT...TGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp AAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCTCCTCTGGGCTCCCTaGCACTGTGTTGTCAAGTAT +
Preference number: 4 (lower is better)
Translates to: KFNVKALQHTYISGPGTCLLWAP*HCVVKY
Trigger: ATACTTGACAACACAGTGCCAGGGAGCCCAGAGGAG...GCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGACTCCTCTGGGCTCCCTaGCACTGTGTTGTCAAGTAT +
Preference number: 4 (lower is better)
Translates to: RVKFNVKALQHTYISGPGLLWAP*HCVVKY
Trigger: ATACTTGACAACACAGTGCCAGGGAGCCCAGAGGAG...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATAAGACATGTCACTGTTaGCATGAGCCCCAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: PCSIPTFQALEPALISFYKTCHC*HEPQLS
Trigger: GGAAAGCTGGGGCTCATGCCAACAGTGACATGTCTT...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp AGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTCTACATTTCAGGCCCTaGAACCTGCCCTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: SLAAYLHFRPWNLPSFLFLHFRP*NLPSFL
Trigger: AAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAG...AAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGACACCTCCCGTATCCGTaGGTGCCAAATATGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RVKFNVKALQHTYISGPGHLPYP*VPNMRG
Trigger: ACCTCTCATATTTGGCACCCACGGATACGGGAGGTG...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353963.7
CDS-3UTR CCA 90 bp AAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCTCTCCAGAGCCAGTATaGCTTTGGCTGGAACCAGAA +
Preference number: 4 (lower is better)
Translates to: KFNVKALQHTYISGPGTCSPEPV*LWLEPE
Trigger: TTCTGGTTCCAGCCAAAGCCATACTGGCTCTGGAGA...GCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGATCTCCAGAGCCAGTATaGCTTTGGCTGGAACCAGAA +
Preference number: 4 (lower is better)
Translates to: RVKFNVKALQHTYISGPGSPEPV*LWLEPE
Trigger: TTCTGGTTCCAGCCAAAGCCATACTGGCTCTGGAGA...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGAAGACATGTCACTGTTaGCATGAGCCCCAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: QIQCKSLAAYLHFRPWNLKTCHC*HEPQLS
Trigger: GGAAAGCTGGGGCTCATGCCAACAGTGACATGTCTT...CAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTACTGATGCAAAAATTTaGATCCCAGAGAAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVTDAKI*IPEKGD
Trigger: GTCACCTTTCTCTGGGATTCAAATTTTTGCATCAGT...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGATTCATGTCCACAAATTaGAGGTTGGACAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: RVKFNVKALQHTYISGPGFMSTN*RLDSPT
Trigger: TGTGGGGCTGTCCAACCTGCAATTTGTGGACATGAA...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp AGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTCTTGGTGCACACAGATaGAGTTTCTGTATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLAAYLHFRPWNLPSFLFLGAHR*SFCIFW
Trigger: CCAGAAAATACAGAAACTGCATCTGTGTGCACCAAG...AAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp TCAACTTGCAGTCTAAAATATCACAGAGGAAAATTTCTAGCTGTTCTTCCTAGAACCATGTGCTGGTCGTaGCCCACACACAGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: STCSLKYHRGKFLAVLPRTMCWS*PTHSAS
Trigger: TGAGGCGCTGTGTGTGGGCCACGACCAGCACATGGT...TCTAGGAAGAACAGCTAGAAATTTTCCTCTGTGATATTTTAGACTGCAAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGGAGCCAGTATGGCTTTaGCTGGAACCAGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: QIQCKSLAAYLHFRPWNLEPVWL*LEPEMQ
Trigger: TTGCATTTCTGGTTCCAGCCAAAGCCATACTGGCTC...CAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp TCAACTTGCAGTCTAAAATATCACAGAGGAAAATTTCTAGCTGTTCTTCCTAGACCAGGACGCCAATGTTaGGACTGGACGAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: STCSLKYHRGKFLAVLPRPGRQC*DWTRWT
Trigger: GGTCCACCTCGTCCAGTCCCAACATTGGCGTCCTGG...TCTAGGAAGAACAGCTAGAAATTTTCCTCTGTGATATTTTAGACTGCAAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGACCACAAACATCTCCGTaGTCAGCAGCACAATCAGAA +
Preference number: 4 (lower is better)
Translates to: RVKFNVKALQHTYISGPGPQTSP*SAAQSE
Trigger: TTCTGATTGTGCTGCTGACCACGGAGATGTTTGTGG...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGAACATTTTGAAGATCTaGATGCGGAGGAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: QIQCKSLAAYLHFRPWNLNILKI*MRRRVR
Trigger: CCTCACTCTCCTCCGCATCCAGATCTTCAAAATGTT...CAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp TCAACTTGCAGTCTAAAATATCACAGAGGAAAATTTCTAGCTGTTCTTCCTAGAATGGTGCCGATGAGCTaGCTAACCATGTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: STCSLKYHRGKFLAVLPRMVPMS*LTMCWS
Trigger: CGACCAGCACATGGTTAGTCAGCTCATCGGCACCAT...TCTAGGAAGAACAGCTAGAAATTTTCCTCTGTGATATTTTAGACTGCAAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp CAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGAGCACAATCAGAATCTaGTCCACTTCAAGAATGCCT +
Preference number: 4 (lower is better)
Translates to: QIQCKSLAAYLHFRPWNLSTIRI*STSRMP
Trigger: AGGCATTCTTGAAGTGGATCAGATTCTGATTGTGCT...CAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp AGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTGCATTAGTCTTGAAGTaGTGTAGGGTCAAATTCAAT +
Preference number: 4 (lower is better)
Translates to: SLAAYLHFRPWNLPSFLFALVLK*CRVKFN
Trigger: ATTGAATTTGACCCTACATCACTTCAAGACTAATGC...AAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp TCAACTTGCAGTCTAAAATATCACAGAGGAAAATTTCTAGCTGTTCTTCCTAGAACGGGCATCGGTTCGTaGCTGGAAGCCATAGGCTTT +
Preference number: 4 (lower is better)
Translates to: STCSLKYHRGKFLAVLPRTGIGS*LEAIGF
Trigger: AAAGCCTATGGCTTCCAGGCACGAACCGATGCCCGT...TCTAGGAAGAACAGCTAGAAATTTTCCTCTGTGATATTTTAGACTGCAAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGACTTGGTGCACACAGATaGAGTTTCTGTATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RVKFNVKALQHTYISGPGLGAHR*SFCIFW
Trigger: CCAGAAAATACAGAAACTGCATCTGTGTGCACCAAG...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATTCCTGTTATATACCATaGTTCCTTTCCTGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PCSIPTFQALEPALISFYSCYIP*FLSWKS
Trigger: TGACTTCCAGGAAAGGAAGCATGGTATATAACAGGA...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp TCAACTTGCAGTCTAAAATATCACAGAGGAAAATTTCTAGCTGTTCTTCCTAGAGAAGCCATAGGCTTTTaGGTCTGTGGGCAGCACGTC +
Preference number: 4 (lower is better)
Translates to: STCSLKYHRGKFLAVLPREAIGF*VCGQHV
Trigger: GACGTGCTGCCCACAGACCCAAAAGCCTATGGCTTC...TCTAGGAAGAACAGCTAGAAATTTTCCTCTGTGATATTTTAGACTGCAAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATTCATTTTTCAGACCTTaGTGCACACAGATGCAGTTT +
Preference number: 4 (lower is better)
Translates to: PCSIPTFQALEPALISFYSFFRP*CTQMQF
Trigger: AAACTGCATCTGTGTGCACCAAGGTCTGAAAAATGA...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp TCAACTTGCAGTCTAAAATATCACAGAGGAAAATTTCTAGCTGTTCTTCCTAGAATGTCACTGTTGGCATaGGCCCCAGCTTTCCACTGT +
Preference number: 4 (lower is better)
Translates to: STCSLKYHRGKFLAVLPRMSLLA*APAFHC
Trigger: ACAGTGGAAAGCTGGGGCTCATGCCAACAGTGACAT...TCTAGGAAGAACAGCTAGAAATTTTCCTCTGTGATATTTTAGACTGCAAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp TCAACTTGCAGTCTAAAATATCACAGAGGAAAATTTCTAGCTGTTCTTCCTAGAATTGCACCCTGGACATaGAAACCCACCTCCCGTATC +
Preference number: 4 (lower is better)
Translates to: STCSLKYHRGKFLAVLPRIAPWT*KPTSRI
Trigger: GATACGGGAGGTGGGTTTGCATGTCCAGGGTGCAAT...TCTAGGAAGAACAGCTAGAAATTTTCCTCTGTGATATTTTAGACTGCAAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353963.7
CDS-3UTR CCA 90 bp AGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTAAATCCTTTGAAGACTaGGCAGATAGGAATGTATTT +
Preference number: 4 (lower is better)
Translates to: SLAAYLHFRPWNLPSFLFKSFED*ADRNVF
Trigger: AAATACATTCCTATCTGCCCAGTCTTCAAAGGATTT...AAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATTTCTGGAGTGTCTTCTaGAATTGCAATCTGATCTTT +
Preference number: 4 (lower is better)
Translates to: PCSIPTFQALEPALISFYFWSVF*NCNLIF
Trigger: AAAGATCAGATTGCAATTCCAGAAGACACTCCAGAA...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACTCATTTTTCAGACCTTaGTGCACACAGATGCAGTTT +
Preference number: 4 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNSFFRP*CTQMQF
Trigger: AAACTGCATCTGTGTGCACCAAGGTCTGAAAAATGA...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACGCATTAGTCTTGAAGTaGTGTAGGGTCAAATTCAAT +
Preference number: 4 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNALVLK*CRVKFN
Trigger: ATTGAATTTGACCCTACATCACTTCAAGACTAATGC...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp TCAACTTGCAGTCTAAAATATCACAGAGGAAAATTTCTAGCTGTTCTTCCTAGACCACAAACATCTCCGTaGTCAGCAGCACAATCAGAA +
Preference number: 4 (lower is better)
Translates to: STCSLKYHRGKFLAVLPRPQTSP*SAAQSE
Trigger: TTCTGATTGTGCTGCTGACCACGGAGATGTTTGTGG...TCTAGGAAGAACAGCTAGAAATTTTCCTCTGTGATATTTTAGACTGCAAGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp CAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGAAATCCTTTGAAGACTaGGCAGATAGGAATGTATTT +
Preference number: 4 (lower is better)
Translates to: QIQCKSLAAYLHFRPWNLKSFED*ADRNVF
Trigger: AAATACATTCCTATCTGCCCAGTCTTCAAAGGATTT...CAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR TCA 90 bp TCAACTTGCAGTCTAAAATATCACAGAGGAAAATTTCTAGCTGTTCTTCCTAGAAGCACAATCAGAATCTaGTCCACTTCAAGAATGCCT +
Preference number: 4 (lower is better)
Translates to: STCSLKYHRGKFLAVLPRSTIRI*STSRMP
Trigger: AGGCATTCTTGAAGTGGATCAGATTCTGATTGTGCT...TCTAGGAAGAACAGCTAGAAATTTTCCTCTGTGATATTTTAGACTGCAAGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR GCA 90 bp TCAACTTGCAGTCTAAAATATCACAGAGGAAAATTTCTAGCTGTTCTTCCTAGATCCTGTTATATACCATaGTTCCTTTCCTGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: STCSLKYHRGKFLAVLPRSCYIP*FLSWKS
Trigger: TGACTTCCAGGAAAGGAAGCATGGTATATAACAGGA...TCTAGGAAGAACAGCTAGAAATTTTCCTCTGTGATATTTTAGACTGCAAGTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CCA 90 bp TCAACTTGCAGTCTAAAATATCACAGAGGAAAATTTCTAGCTGTTCTTCCTAGATTCTGGAGTGTCTTCTaGAATTGCAATCTGATCTTT +
Preference number: 4 (lower is better)
Translates to: STCSLKYHRGKFLAVLPRFWSVF*NCNLIF
Trigger: AAAGATCAGATTGCAATTCCAGAAGACACTCCAGAA...TCTAGGAAGAACAGCTAGAAATTTTCCTCTGTGATATTTTAGACTGCAAGTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS GCA 90 bp CCAGCTGGGCAGCAGCTTCATGCCACAGCACTGAGTCCGCCCGCCTaGCGGTGTCCACACTGTTCCTCTGTCCGCCTGTCCTCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: PAGQQLHATALSPPA*RCPHCSSVRLSSPL
Trigger: GAGAGGAGAGGACAGGCGGACAGAGGAACAGTGTGGACACCGGCAGGCGGGCGGACTCAGTGCTGTGGCATGAAGCTGCTGCCCAGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508270.1
CDS GCA 90 bp CCTAGTGTCCTCATGCCTGCCTCAGCGGGCCTGGAACCGGCTGCCTaGCCAGGACTGGCAGTCCCCACAAGGGATTCCCAGAGAGCTACT +
Preference number: 5 (lower is better)
Translates to: PSVLMPASAGLEPAA*PGLAVPTRDSQRAT
Trigger: AGTAGCTCTCTGGGAATCCCTTGTGGGGACTGCCAGTCCTGGGCAGGCAGCCGGTTCCAGGCCCGCTGAGGCAGGCATGAGGACACTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502863.1
CDS GCA 90 bp CCCACCTCAGCCCAAGCCCTGGCCATAGTCCCAGCCCCAGCCGCCTaGCAGGTCCTCACAGGAAACATTTTGAAGATCTGGATGCGGAGG +
Preference number: 5 (lower is better)
Translates to: PTSAQALAIVPAPAA*QVLTGNILKIWMRR
Trigger: CCTCCGCATCCAGATCTTCAAAATGTTTCCTGTGAGGACCTGGCAGGCGGCTGGGGCTGGGACTATGGCCAGGGCTTGGGCTGAGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506512.1
CDS CCA 90 bp TTCATGCTGTGTCCGGCCCTCGAGGTCCTCCTGGGCCCTCATCTTTaGGGCACAGGTTTGAGCAGTTCTTCTGGGTCGCTGTGCCCATGG +
Preference number: 5 (lower is better)
Translates to: FMLCPALEVLLGPHL*GTGLSSSSGSLCPW
Trigger: CCATGGGCACAGCGACCCAGAAGAACTGCTCAAACCTGTGCCCCAAAGATGAGGGCCCAGGAGGACCTCGAGGGCCGGACACAGCATGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508270.1
CDS TCA 90 bp ATGAGAGTGGTGATGCCCACGCACGTGAAGATGGTGCCGATGAGCTaGCTAACCATGTGCTGGTCGTGGCCCACACACAGCGCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: MRVVMPTHVKMVPMS*LTMCWSWPTHSASA
Trigger: GGCTGAGGCGCTGTGTGTGGGCCACGACCAGCACATGGTTAGTCAGCTCATCGGCACCATCTTCACGTGCGTGGGCATCACCACTCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348729.8
ENST00000353963.7
ENST00000502863.1
ENST00000503919.1
ENST00000508270.1
CDS GCA 90 bp GATCCAGGGTGCAATAGCCATGATGTCACCACGGGCATCGGTTCGTaGCTGGAAGCCATAGGCTTTTGGGTCTGTGGGCAGCACGTCTGT +
Preference number: 5 (lower is better)
Translates to: DPGCNSHDVTTGIGS*LEAIGFWVCGQHVC
Trigger: ACAGACGTGCTGCCCACAGACCCAAAAGCCTATGGCTTCCAGGCACGAACCGATGCCCGTGGTGACATCATGGCTATTGCACCCTGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348729.8
ENST00000353963.7
ENST00000506512.1
CDS GCA 90 bp CTGCTGACCACTCTGGGGGTCACTAATTTCCACTCAAGATATTCCTaGGGCTTCCGTGGAGTCGGCTCTGCTCCCTGTCACCAACACCCC +
Preference number: 5 (lower is better)
Translates to: LLTTLGVTNFHSRYS*GFRGVGSAPCHQHP
Trigger: GGGGTGTTGGTGACAGGGAGCAGAGCCGACTCCACGGAAGCCGCAGGAATATCTTGAGTGGAAATTAGTGACCCCCAGAGTGGTCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502863.1
CDS TCA 90 bp CCCAGGACTGGCAGTCCCCACAAGGGATTCCCAGAGAGCTACTGCTaGCCACTCTGGGGGTCACTAATTTCCACTCAAGATATTCCTGCG +
Preference number: 5 (lower is better)
Translates to: PRTGSPHKGFPESYC*PLWGSLISTQDIPA
Trigger: CGCAGGAATATCTTGAGTGGAAATTAGTGACCCCCAGAGTGGTCAGCAGTAGCTCTCTGGGAATCCCTTGTGGGGACTGCCAGTCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502863.1
CDS-3UTR CAA 90 bp AAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCGACGAGGTGGACCCGTaGCCCGTGCCCAATAGCCCC +
Preference number: 5 (lower is better)
Translates to: KFNVKALQHTYISGPGTCDEVDP*PVPNSP
Trigger: GGGGCTATTGGGCACGGGCAACGGGTCCACCTCGTC...GCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp AGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTAAGAGGGCCGTGAACTaGCCGATGGTGCCCAGGACC +
Preference number: 5 (lower is better)
Translates to: SLAAYLHFRPWNLPSFLFKRAVN*PMVPRT
Trigger: GGTCCTGGGCACCATCGGCAAGTTCACGGCCCTCTT...AAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTAGCAGGAAGGTGAGGTaGCGCAGGTACTGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVSRKVR*RRYWEK
Trigger: CTTCTCCCAGTACCTGCGCAACCTCACCTTCCTGCT...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCGCCGGCTGCCCACCTaGGTAATTCCCAGGACGCCA +
Preference number: 5 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNRRLPT*VIPRTP
Trigger: TGGCGTCCTGGGAATTACCAAGGTGGGCAGCCGGCG...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATAAGAGGGCCGTGAACTaGCCGATGGTGCCCAGGACC +
Preference number: 5 (lower is better)
Translates to: PCSIPTFQALEPALISFYKRAVN*PMVPRT
Trigger: GGTCCTGGGCACCATCGGCAAGTTCACGGCCCTCTT...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp CAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCACCCAGCACGAAGAGGTaGCGAGAGGAGTTCATGTCC +
Preference number: 5 (lower is better)
Translates to: QCKSLAAYLHFRPWNLPSPSTKR*REEFMS
Trigger: GGACATGAACTCCTCTCGCAACCTCTTCGTGCTGGG...TGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTTCGGTCGCCAGCAGCTaGGAAGACAGAAAGGCCAAT +
Preference number: 5 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVSVASS*EDRKAN
Trigger: ATTGGCCTTTCTGTCTTCCAAGCTGCTGGCGACCGA...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp CAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCAGGACGCCAATGTaGGGACTGGACGAGGTGGAC +
Preference number: 5 (lower is better)
Translates to: QIQCKSLAAYLHFRPWNLPRTPM*GLDEVD
Trigger: GTCCACCTCGTCCAGTCCCAACATTGGCGTCCTGGG...CAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCCCAGGACGCCAATGTaGGGACTGGACGAGGTGGAC +
Preference number: 5 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNPRTPM*GLDEVD
Trigger: GTCCACCTCGTCCAGTCCCAACATTGGCGTCCTGGG...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS GCA 90 bp AATCCCAGCACGAAGAGGTTGCGAGAGGAGTTCATGTCCACAAATTaGAGGTTGGACAGCCCCACAGCTGTAATCATGCCAAAGAGAGTG +
Preference number: 5 (lower is better)
Translates to: NPSTKRLREEFMSTN*RLDSPTAVIMPKRV
Trigger: CACTCTCTTTGGCATGATTACAGCTGTGGGGCTGTCCAACCTGCAATTTGTGGACATGAACTCCTCTCGCAACCTCTTCGTGCTGGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp CAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCTGGGCCCTCATCTTaGGGGCACAGGTTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: QIQCKSLAAYLHFRPWNLPGPSS*GHRFEQ
Trigger: CTGCTCAAACCTGTGCCCCAAAGATGAGGGCCCAGG...CAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCCTGGGCCCTCATCTTaGGGGCACAGGTTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNPGPSS*GHRFEQ
Trigger: CTGCTCAAACCTGTGCCCCAAAGATGAGGGCCCAGG...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATGGAAGCCATAGGCTTTaGGGTCTGTGGGCAGCACGT +
Preference number: 5 (lower is better)
Translates to: PCSIPTFQALEPALISFYGSHRL*GLWAAR
Trigger: ACGTGCTGCCCACAGACCCAAAAGCCTATGGCTTCC...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp CAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATCCACAAATTGCAGGTaGGACAGCCCCACAGCTGTA +
Preference number: 5 (lower is better)
Translates to: QCKSLAAYLHFRPWNLPSSTNCR*DSPTAV
Trigger: TACAGCTGTGGGGCTGTCCAACCTGCAATTTGTGGA...TGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTTCAAGAATGCCTGTATaGATGGCGCCAGGGTTGGAC +
Preference number: 5 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVSRMPV*MAPGLD
Trigger: GTCCAACCCTGGCGCCATCAATACAGGCATTCTTGA...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATTCGGTCGCCAGCAGCTaGGAAGACAGAAAGGCCAAT +
Preference number: 5 (lower is better)
Translates to: PCSIPTFQALEPALISFYSVASS*EDRKAN
Trigger: ATTGGCCTTTCTGTCTTCCAAGCTGCTGGCGACCGA...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp CAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGAGCAGGAAGGTGAGGTaGCGCAGGTACTGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: QIQCKSLAAYLHFRPWNLSRKVR*RRYWEK
Trigger: CTTCTCCCAGTACCTGCGCAACCTCACCTTCCTGCT...CAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACGGAAGCCATAGGCTTTaGGGTCTGTGGGCAGCACGT +
Preference number: 5 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNGSHRL*GLWAAR
Trigger: ACGTGCTGCCCACAGACCCAAAAGCCTATGGCTTCC...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGACCCAGCACGAAGAGGTaGCGAGAGGAGTTCATGTCC +
Preference number: 5 (lower is better)
Translates to: RVKFNVKALQHTYISGPGPSTKR*REEFMS
Trigger: GGACATGAACTCCTCTCGCAACCTCTTCGTGCTGGG...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTCTCCCTGGCACTGTGTaGTCAAGTATGAAAGCAAGG +
Preference number: 5 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVLPGTV*SSMKAR
Trigger: CCTTGCTTTCATACTTGACAACACAGTGCCAGGGAG...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp TCAACTTGCAGTCTAAAATATCACAGAGGAAAATTTCTAGCTGTTCTTCCTAGAGACGAGGTGGACCCGTaGCCCGTGCCCAATAGCCCC +
Preference number: 5 (lower is better)
Translates to: STCSLKYHRGKFLAVLPRDEVDP*PVPNSP
Trigger: GGGGCTATTGGGCACGGGCAACGGGTCCACCTCGTC...TCTAGGAAGAACAGCTAGAAATTTTCCTCTGTGATATTTTAGACTGCAAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp CCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCATTTCTTTTTATGTTCATGTCCACAAATaGCAGGTTGGACAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: PCSIPTFQALEPALISFYVHVHK*QVGQPH
Trigger: GTGGGGCTGTCCAACCTGCAATTTGTGGACATGAAC...ATAAAAAGAAATGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp ACACAGAAGTTAGTTAGGGGCAGGGCTGGGATTTCAGGCTTAGGTCTTCTGGTTGGCACGTCCTCGATCTaGTACAACATGTCAAACTTA +
Preference number: 5 (lower is better)
Translates to: TQKLVRGRAGISGLGLLVGTSSI*YNMSNL
Trigger: TAAGTTTGACATGTTGTACAAGATCGAGGACGTGCC...AACCAGAAGACCTAAGCCTGAAATCCCAGCCCTGCCCCTAACTAACTTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAGTGAAGATGCCCCTGTaGATAGCATGTACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: RVKFNVKALQHTYISGPGVKMPL*IACTGG
Trigger: CCCTCCAGTACATGCTATCAACAGGGGCATCTTCAC...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp TCAACTTGCAGTCTAAAATATCACAGAGGAAAATTTCTAGCTGTTCTTCCTAGACGCCGGCTGCCCACCTaGGTAATTCCCAGGACGCCA +
Preference number: 5 (lower is better)
Translates to: STCSLKYHRGKFLAVLPRRRLPT*VIPRTP
Trigger: TGGCGTCCTGGGAATTACCAAGGTGGGCAGCCGGCG...TCTAGGAAGAACAGCTAGAAATTTTCCTCTGTGATATTTTAGACTGCAAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACTCCACAAATTGCAGGTaGGACAGCCCCACAGCTGTA +
Preference number: 5 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNSTNCR*DSPTAV
Trigger: TACAGCTGTGGGGCTGTCCAACCTGCAATTTGTGGA...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp AAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCGTTCATGTCCACAAATaGCAGGTTGGACAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: KFNVKALQHTYISGPGTCVHVHK*QVGQPH
Trigger: GTGGGGCTGTCCAACCTGCAATTTGTGGACATGAAC...GCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACTCAAGAATGCCTGTATaGATGGCGCCAGGGTTGGAC +
Preference number: 5 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNSRMPV*MAPGLD
Trigger: GTCCAACCCTGGCGCCATCAATACAGGCATTCTTGA...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp CAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCCCTCAATGATAGGAAACATTTaGAAGATCTGGATGCGGAGG +
Preference number: 5 (lower is better)
Translates to: QCKSLAAYLHFRPWNLPSMIGNI*KIWMRR
Trigger: CCTCCGCATCCAGATCTTCAAAATGTTTCCTATCAT...TGAGGGCAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp CAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGCTCCCTGGCACTGTGTaGTCAAGTATGAAAGCAAGG +
Preference number: 5 (lower is better)
Translates to: QIQCKSLAAYLHFRPWNLLPGTV*SSMKAR
Trigger: CCTTGCTTTCATACTTGACAACACAGTGCCAGGGAG...CAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp CAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACCTGGGCACGTCCTCGATCTaGTACAACATGTCAAACTTA +
Preference number: 5 (lower is better)
Translates to: QIQCKSLAAYLHFRPWNLGTSSI*YNMSNL
Trigger: TAAGTTTGACATGTTGTACAAGATCGAGGACGTGCC...CAGGTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACATGATAGGAAACATTTaGAAGATCTGGATGCGGAGG +
Preference number: 5 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNMIGNI*KIWMRR
Trigger: CCTCCGCATCCAGATCTTCAAAATGTTTCCTATCAT...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGACTTGAAGAAAATCCTTaGAAGACTGGGCAGATAGGA +
Preference number: 5 (lower is better)
Translates to: RVKFNVKALQHTYISGPGLEENP*KTGQIG
Trigger: TCCTATCTGCCCAGTCTTCAAAGGATTTTCTTCAAG...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp AGGGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAGAGTGTCTTCTGGAATaGCAATCTGATCTTTTGAAC +
Preference number: 5 (lower is better)
Translates to: RVKFNVKALQHTYISGPGECLLE*QSDLLN
Trigger: GTTCAAAAGATCAGATTGCAATTCCAGAAGACACTC...TCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACGAGTGTCTTCTGGAATaGCAATCTGATCTTTTGAAC +
Preference number: 5 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNECLLE*QSDLLN
Trigger: GTTCAAAAGATCAGATTGCAATTCCAGAAGACACTC...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp TCAACTTGCAGTCTAAAATATCACAGAGGAAAATTTCTAGCTGTTCTTCCTAGAAGAGCCAGTATGGCTTaGGCTGGAACCAGAAATGCA +
Preference number: 5 (lower is better)
Translates to: STCSLKYHRGKFLAVLPRRASMA*AGTRNA
Trigger: TGCATTTCTGGTTCCAGCCAAAGCCATACTGGCTCT...TCTAGGAAGAACAGCTAGAAATTTTCCTCTGTGATATTTTAGACTGCAAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACAGACATAGCATAACATaGGTACAAGTCTCTAAGACT +
Preference number: 5 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNRHSIT*VQVSKT
Trigger: AGTCTTAGAGACTTGTACCAATGTTATGCTATGTCT...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp GGTCAAATTCAATGTAAAAGCCTTGCAGCATACCTACATTTCAGGCCCTGGAACTTCAATGTAAAAGCCTaGCAGCATACCTACATTTCA +
Preference number: 5 (lower is better)
Translates to: GQIQCKSLAAYLHFRPWNFNVKA*QHTYIS
Trigger: TGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAA...GTTCCAGGGCCTGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAATTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS-3UTR CAA 90 bp TCAACTTGCAGTCTAAAATATCACAGAGGAAAATTTCTAGCTGTTCTTCCTAGATTCAATGTAAAAGCCTaGCAGCATACCTACATTTCA +
Preference number: 5 (lower is better)
Translates to: STCSLKYHRGKFLAVLPRFNVKA*QHTYIS
Trigger: TGAAATGTAGGTATGCTGCAAGGCTTTTACATTGAA...TCTAGGAAGAACAGCTAGAAATTTTCCTCTGTGATATTTTAGACTGCAAGTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS GCA 72 bp CTCATGCCTGCCTCAGCGGGCCTGGAACCGGCTGCCTaGCCAGGACTGGCAGTCCCCACAAGGGATTCCCAG +
Preference number: 6 (lower is better)
Translates to: LMPASAGLEPAA*PGLAVPTRDSQ
Trigger: CTGGGAATCCCTTGTGGGGACTGCCAGTCCTGGGCAGGCAGCCGGTTCCAGGCCCGCTGAGGCAGGCATGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502863.1
CDS GCA 72 bp TGTCCTCATGCCTGCCTCAGCGGGCCTGGAACCGGCTaGCTGCCCAGGACTGGCAGTCCCCACAAGGGATTC +
Preference number: 6 (lower is better)
Translates to: CPHACLSGPGTG*LPRTGSPHKGF
Trigger: GAATCCCTTGTGGGGACTGCCAGTCCTGGGCAGGCAGCCGGTTCCAGGCCCGCTGAGGCAGGCATGAGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502863.1
CDS CCA 72 bp TGCCTGAAGGGCCAAGGGGCAGCACCGCTCTCCAGCTaGGCAGCAGCTTCATGCCACAGCACTGAGTCCGCC +
Preference number: 6 (lower is better)
Translates to: CLKGQGAAPLSS*AAASCHSTESA
Trigger: GGCGGACTCAGTGCTGTGGCATGAAGCTGCTGCCCAGCTGGAGAGCGGTGCTGCCCCTTGGCCCTTCAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508270.1
CDS CAA 90 bp ACCACGCGCCGGCTGCCCACCTTGGTAATTCCCAGGACGCCAATGTaGGGACTGGACGAGGTGGACCCGTTGCCCGTGCCCAATAGCCCC +
Preference number: 6 (lower is better)
Translates to: TTRRLPTLVIPRTPM*GLDEVDPLPVPNSP
Trigger: GGGGCTATTGGGCACGGGCAACGGGTCCACCTCGTCCAGTCCCAACATTGGCGTCCTGGGAATTACCAAGGTGGGCAGCCGGCGCGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS TCA 72 bp GCTCTCCAGCTGGGCAGCAGCTTCATGCCACAGCACTaGGTCCGCCCGCCTGCCGGTGTCCACACTGTTCCT +
Preference number: 6 (lower is better)
Translates to: ALQLGSSFMPQH*VRPPAGVHTVP
Trigger: AGGAACAGTGTGGACACCGGCAGGCGGGCGGACTCAGTGCTGTGGCATGAAGCTGCTGCCCAGCTGGAGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508270.1
CDS GCA 72 bp CAGCAGCTTCATGCCACAGCACTGAGTCCGCCCGCCTaGCGGTGTCCACACTGTTCCTCTGTCCGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: QQLHATALSPPA*RCPHCSSVRLS
Trigger: GGACAGGCGGACAGAGGAACAGTGTGGACACCGGCAGGCGGGCGGACTCAGTGCTGTGGCATGAAGCTGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508270.1
CDS CAA 72 bp CGGCTGCCCACCTTGGTAATTCCCAGGACGCCAATGTaGGGACTGGACGAGGTGGACCCGTTGCCCGTGCCC +
Preference number: 6 (lower is better)
Translates to: RLPTLVIPRTPM*GLDEVDPLPVP
Trigger: GGGCACGGGCAACGGGTCCACCTCGTCCAGTCCCAACATTGGCGTCCTGGGAATTACCAAGGTGGGCAGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS TCA 72 bp GCAGGCCAATCACCACCTCCACCACGCTGGACACCATaGTTGCACCCTGGACCTCCCGTATCCGTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: AGQSPPPPRWTP*LHPGPPVSVGA
Trigger: GGCACCCACGGATACGGGAGGTCCAGGGTGCAATCATGGTGTCCAGCGTGGTGGAGGTGGTGATTGGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348729.8
CDS CCA 72 bp GCCTGGAACAGCGGCAGCCGGATGCCCACGGTGGTCTaGATGAGAGTGGTGATGCCCACGCACGTGAAGATG +
Preference number: 6 (lower is better)
Translates to: AWNSGSRMPTVV*MRVVMPTHVKM
Trigger: CATCTTCACGTGCGTGGGCATCACCACTCTCATCCAGACCACCGTGGGCATCCGGCTGCCGCTGTTCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348729.8
ENST00000353963.7
ENST00000502863.1
ENST00000503919.1
CDS CCA 72 bp GCCTTCGGTGAAGATGCCCCTGTTGATAGCATGTACTaGAGGGGGTGGTGCACCAGCCAGGCGGGCACAGGC +
Preference number: 6 (lower is better)
Translates to: AFGEDAPVDSMY*RGWCTSQAGTG
Trigger: GCCTGTGCCCGCCTGGCTGGTGCACCACCCCCTCCAGTACATGCTATCAACAGGGGCATCTTCACCGAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348729.8
ENST00000353963.7
ENST00000504513.1
CDS CAA 72 bp ATGGGGTCAGGGAGCGAGGCGAAGAGGGCCGTGAACTaGCCGATGGTGCCCAGGACCAGCATGATAGCCGCA +
Preference number: 6 (lower is better)
Translates to: MGSGSEAKRAVN*PMVPRTSMIAA
Trigger: TGCGGCTATCATGCTGGTCCTGGGCACCATCGGCAAGTTCACGGCCCTCTTCGCCTCGCTCCCTGACCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS GCA 72 bp ATGGTGCCCAGGACCAGCATGATAGCCGCACCATACTaGACCACGCGCCGGCTGCCCACCTTGGTAATTCCC +
Preference number: 6 (lower is better)
Translates to: MVPRTSMIAAPY*TTRRLPTLVIP
Trigger: GGGAATTACCAAGGTGGGCAGCCGGCGCGTGGTGCAGTATGGTGCGGCTATCATGCTGGTCCTGGGCACCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS CCA 72 bp GCTTTGGCTGGAACCAGAAATGCAAAGGCACTGGCCTaGAACAGCGGCAGCCGGATGCCCACGGTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: ALAGTRNAKALA*NSGSRMPTVVW
Trigger: CCAGACCACCGTGGGCATCCGGCTGCCGCTGTTCCAGGCCAGTGCCTTTGCATTTCTGGTTCCAGCCAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348729.8
ENST00000353963.7
ENST00000502863.1
ENST00000503919.1
CDS CAA 90 bp ATAGTCCCAGCCCCAGCCGCCTGCCAGGTCCTCACAGGAAACATTTaGAAGATCTGGATGCGGAGGAGAGTGAGGCCCTTGCCCCAGCGG +
Preference number: 6 (lower is better)
Translates to: IVPAPAACQVLTGNI*KIWMRRRVRPLPQR
Trigger: CCGCTGGGGCAAGGGCCTCACTCTCCTCCGCATCCAGATCTTCAAAATGTTTCCTGTGAGGACCTGGCAGGCGGCTGGGGCTGGGACTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506512.1
CDS GCA 72 bp CTCAAGATATTCCTGCGGCTTCCGTGGAGTCGGCTCTaGTCCCTGTCACCAACACCCCACCTGGCAAGCGTC +
Preference number: 6 (lower is better)
Translates to: LKIFLRLPWSRL*SLSPTPHLASV
Trigger: GACGCTTGCCAGGTGGGGTGTTGGTGACAGGGAGCAGAGCCGACTCCACGGAAGCCGCAGGAATATCTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502863.1
CDS CCA 72 bp GTATGGCTTTGGCTGGAACCAGAAATGCAAAGGCACTaGCCTGGAACAGCGGCAGCCGGATGCCCACGGTGG +
Preference number: 6 (lower is better)
Translates to: VWLWLEPEMQRH*PGTAAAGCPRW
Trigger: CCACCGTGGGCATCCGGCTGCCGCTGTTCCAGGCCAGTGCCTTTGCATTTCTGGTTCCAGCCAAAGCCATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348729.8
ENST00000353963.7
ENST00000502863.1
ENST00000503919.1
CDS CAA 90 bp TTTCATGCTGTGTCCGGCCCTCGAGGTCCTCCTGGGCCCTCATCTTaGGGGCACAGGTTTGAGCAGTTCTTCTGGGTCGCTGTGCCCATG +
Preference number: 6 (lower is better)
Translates to: FHAVSGPRGPPGPSS*GHRFEQFFWVAVPM
Trigger: CATGGGCACAGCGACCCAGAAGAACTGCTCAAACCTGTGCCCCAAAGATGAGGGCCCAGGAGGACCTCGAGGGCCGGACACAGCATGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508270.1
CDS TCA 72 bp GTGATGCCCACGCACGTGAAGATGGTGCCGATGAGCTaGCTAACCATGTGCTGGTCGTGGCCCACACACAGC +
Preference number: 6 (lower is better)
Translates to: VMPTHVKMVPMS*LTMCWSWPTHS
Trigger: GCTGTGTGTGGGCCACGACCAGCACATGGTTAGTCAGCTCATCGGCACCATCTTCACGTGCGTGGGCATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348729.8
ENST00000353963.7
ENST00000502863.1
ENST00000503919.1
ENST00000508270.1
CDS CCA 72 bp ACGGGCATCGGTTCGTGCCTGGAAGCCATAGGCTTTTaGGTCTGTGGGCAGCACGTCTGTCAAGGTCAGGAC +
Preference number: 6 (lower is better)
Translates to: TGIGSCLEAIGF*VCGQHVCQGQD
Trigger: GTCCTGACCTTGACAGACGTGCTGCCCACAGACCCAAAAGCCTATGGCTTCCAGGCACGAACCGATGCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348729.8
ENST00000353963.7
ENST00000506512.1
CDS CCA 72 bp GCCTGCCAGGTCCTCACAGGAAACATTTTGAAGATCTaGATGCGGAGGAGAGTGAGGCCCTTGCCCCAGCGG +
Preference number: 6 (lower is better)
Translates to: ACQVLTGNILKI*MRRRVRPLPQR
Trigger: CCGCTGGGGCAAGGGCCTCACTCTCCTCCGCATCCAGATCTTCAAAATGTTTCCTGTGAGGACCTGGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506512.1
CDS CAA 72 bp CACGGGCATCGGTTCGTGCCTGGAAGCCATAGGCTTTaGGGTCTGTGGGCAGCACGTCTGTCAAGGTCAGGA +
Preference number: 6 (lower is better)
Translates to: HGHRFVPGSHRL*GLWAARLSRSG
Trigger: TCCTGACCTTGACAGACGTGCTGCCCACAGACCCAAAAGCCTATGGCTTCCAGGCACGAACCGATGCCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348729.8
ENST00000353963.7
ENST00000506512.1
CDS CAA 72 bp GCCCCAGCCGCCTGCCAGGTCCTCACAGGAAACATTTaGAAGATCTGGATGCGGAGGAGAGTGAGGCCCTTG +
Preference number: 6 (lower is better)
Translates to: APAACQVLTGNI*KIWMRRRVRPL
Trigger: CAAGGGCCTCACTCTCCTCCGCATCCAGATCTTCAAAATGTTTCCTGTGAGGACCTGGCAGGCGGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506512.1
CDS TCA 72 bp GCTCCTCTGGGCTCCCTGGCACTGTGTTGTCAAGTATaGAAGCAAGGCACCCGCCCACAAACATCTCCGTGG +
Preference number: 6 (lower is better)
Translates to: APLGSLALCCQV*KQGTRPQTSPW
Trigger: CCACGGAGATGTTTGTGGGCGGGTGCCTTGCTTTCATACTTGACAACACAGTGCCAGGGAGCCCAGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS CCA 72 bp ATGATCAGGAGAATGGAGCAAGCTGAGATGCCCCAGTaGGAGCCAGCTCGGTCGCCAGCAGCTTGGAAGACA +
Preference number: 6 (lower is better)
Translates to: MIRRMEQAEMPQ*EPARSPAAWKT
Trigger: TGTCTTCCAAGCTGCTGGCGACCGAGCTGGCTCCCACTGGGGCATCTCAGCTTGCTCCATTCTCCTGATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS GCA 72 bp TGCAATAGCCATGATGTCACCACGGGCATCGGTTCGTaGCTGGAAGCCATAGGCTTTTGGGTCTGTGGGCAG +
Preference number: 6 (lower is better)
Translates to: CNSHDVTTGIGS*LEAIGFWVCGQ
Trigger: CTGCCCACAGACCCAAAAGCCTATGGCTTCCAGGCACGAACCGATGCCCGTGGTGACATCATGGCTATTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348729.8
ENST00000353963.7
ENST00000506512.1
CDS CCA 72 bp TGCACCCTGGACATGCAAACCCACCTCCCGTATCCGTaGGTGCCAAATATGAGAGGTGTTCAGGGGCAGACT +
Preference number: 6 (lower is better)
Translates to: CTLDMQTHLPYP*VPNMRGVQGQT
Trigger: AGTCTGCCCCTGAACACCTCTCATATTTGGCACCCACGGATACGGGAGGTGGGTTTGCATGTCCAGGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353963.7
CDS CAA 90 bp AAGCCCAGCAGGATGCACAGGTACCAAGGTGGCACGTCCTCGATCTaGTACAACATGTCAAACTTAGGCTCTGTGGGTAGCGGGGTCGAG +
Preference number: 6 (lower is better)
Translates to: KPSRMHRYQGGTSSI*YNMSNLGSVGSGVE
Trigger: CTCGACCCCGCTACCCACAGAGCCTAAGTTTGACATGTTGTACAAGATCGAGGACGTGCCACCTTGGTACCTGTGCATCCTGCTGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348729.8
ENST00000353963.7
ENST00000503919.1
ENST00000508270.1
CDS CAA 90 bp GGCAGCGTGAGCCCGAAGAACATGGAAAATCCCAGCACGAAGAGGTaGCGAGAGGAGTTCATGTCCACAAATTGCAGGTTGGACAGCCCC +
Preference number: 6 (lower is better)
Translates to: GSVSPKNMENPSTKR*REEFMSTNCRLDSP
Trigger: GGGGCTGTCCAACCTGCAATTTGTGGACATGAACTCCTCTCGCAACCTCTTCGTGCTGGGATTTTCCATGTTCTTCGGGCTCACGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS TCA 72 bp GGCAGTCCCCACAAGGGATTCCCAGAGAGCTACTGCTaGCCACTCTGGGGGTCACTAATTTCCACTCAAGAT +
Preference number: 6 (lower is better)
Translates to: GSPHKGFPESYC*PLWGSLISTQD
Trigger: ATCTTGAGTGGAAATTAGTGACCCCCAGAGTGGTCAGCAGTAGCTCTCTGGGAATCCCTTGTGGGGACTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502863.1
CDS CCA 72 bp ATGATGGCCAGCATGATAGGAAACATTTTGAAGATCTaGATGCGGAGGAGAGTGAGGCCCTTGCCCCAGCGG +
Preference number: 6 (lower is better)
Translates to: MMASMIGNILKI*MRRRVRPLPQR
Trigger: CCGCTGGGGCAAGGGCCTCACTCTCCTCCGCATCCAGATCTTCAAAATGTTTCCTATCATGCTGGCCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS CCA 72 bp GTGCTGGAAGCCCAGCAGGATGCACAGGTACCAAGGTaGCACGTCCTCGATCTTGTACAACATGTCAAACTT +
Preference number: 6 (lower is better)
Translates to: VLEAQQDAQVPR*HVLDLVQHVKL
Trigger: AAGTTTGACATGTTGTACAAGATCGAGGACGTGCCACCTTGGTACCTGTGCATCCTGCTGGGCTTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348729.8
ENST00000353963.7
ENST00000503919.1
ENST00000508270.1
CDS CAA 72 bp CACGAAGAGGTTGCGAGAGGAGTTCATGTCCACAAATaGCAGGTTGGACAGCCCCACAGCTGTAATCATGCC +
Preference number: 6 (lower is better)
Translates to: HEEVARGVHVHK*QVGQPHSCNHA
Trigger: GGCATGATTACAGCTGTGGGGCTGTCCAACCTGCAATTTGTGGACATGAACTCCTCTCGCAACCTCTTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS CAA 90 bp GGGAGTTCATCTTCTTTCAGGATTCAGCCTCTTCCCGACTCCTGCTaGCTGACAGCCACTGTGCTGACCTCAGGTTTTTCTTCCTGTTAC +
Preference number: 6 (lower is better)
Translates to: GSSSSFRIQPLPDSC*LTATVLTSGFSSCY
Trigger: GTAACAGGAAGAAAAACCTGAGGTCAGCACAGTGGCTGTCAGCAAGCAGGAGTCGGGAAGAGGCTGAATCCTGAAAGAAGATGAACTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502863.1
CDS TCA 72 bp TTACTATGCCCATCCCAATGGGGAAATCGTAGCTCTTaGGGCTGGAAGACATGTCACTGTTGGCATGAGCCC +
Preference number: 6 (lower is better)
Translates to: LLCPSQWGNRSS*GWKTCHCWHEP
Trigger: GGGCTCATGCCAACAGTGACATGTCTTCCAGCCTCAAGAGCTACGATTTCCCCATTGGGATGGGCATAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS GCA 72 bp ACGAAGAGGTTGCGAGAGGAGTTCATGTCCACAAATTaGAGGTTGGACAGCCCCACAGCTGTAATCATGCCA +
Preference number: 6 (lower is better)
Translates to: TKRLREEFMSTN*RLDSPTAVIMP
Trigger: TGGCATGATTACAGCTGTGGGGCTGTCCAACCTGCAATTTGTGGACATGAACTCCTCTCGCAACCTCTTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS GCA 72 bp GCCCGAAGAACATGGAAAATCCCAGCACGAAGAGGTTaGGAGAGGAGTTCATGTCCACAAATTGCAGGTTGG +
Preference number: 6 (lower is better)
Translates to: ARRTWKIPARRG*ERSSCPQIAGW
Trigger: CCAACCTGCAATTTGTGGACATGAACTCCTCTCGCAACCTCTTCGTGCTGGGATTTTCCATGTTCTTCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS CAA 72 bp AGGATGCACAGGTACCAAGGTGGCACGTCCTCGATCTaGTACAACATGTCAAACTTAGGCTCTGTGGGTAGC +
Preference number: 6 (lower is better)
Translates to: RMHRYQGGTSSI*YNMSNLGSVGS
Trigger: GCTACCCACAGAGCCTAAGTTTGACATGTTGTACAAGATCGAGGACGTGCCACCTTGGTACCTGTGCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348729.8
ENST00000353963.7
ENST00000503919.1
ENST00000508270.1
CDS CAA 72 bp TCTTCTTTCAGGATTCAGCCTCTTCCCGACTCCTGCTaGCTGACAGCCACTGTGCTGACCTCAGGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: SSFRIQPLPDSC*LTATVLTSGFS
Trigger: AGAAAAACCTGAGGTCAGCACAGTGGCTGTCAGCAAGCAGGAGTCGGGAAGAGGCTGAATCCTGAAAGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502863.1
CDS CAA 90 bp AAATCCCAGCACGAAGAGGTTGCGAGAGGAGTTCATGTCCACAAATaGCAGGTTGGACAGCCCCACAGCTGTAATCATGCCAAAGAGAGT +
Preference number: 6 (lower is better)
Translates to: KSQHEEVARGVHVHK*QVGQPHSCNHAKES
Trigger: ACTCTCTTTGGCATGATTACAGCTGTGGGGCTGTCCAACCTGCAATTTGTGGACATGAACTCCTCTCGCAACCTCTTCGTGCTGGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS CAA 72 bp AGCCCGAAGAACATGGAAAATCCCAGCACGAAGAGGTaGCGAGAGGAGTTCATGTCCACAAATTGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: SPKNMENPSTKR*REEFMSTNCRL
Trigger: CAACCTGCAATTTGTGGACATGAACTCCTCTCGCAACCTCTTCGTGCTGGGATTTTCCATGTTCTTCGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7
CDS TCA 72 bp ACAAACATCTCCGTGGTCAGCAGCACAATCAGAATCTaGTCCACTTCAAGAATGCCTGTATTGATGGCGCCA +
Preference number: 6 (lower is better)
Translates to: TNISVVSSTIRI*STSRMPVLMAP
Trigger: TGGCGCCATCAATACAGGCATTCTTGAAGTGGATCAGATTCTGATTGTGCTGCTGACCACGGAGATGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348729.8
ENST00000353963.7