RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC22A8 (Homo sapiens)

Ensembl gene IDs: ENSG00000149452

Ensembl transcript IDs: ENST00000311438.12, ENST00000336232.7, ENST00000430500.6, ENST00000451262.1, ENST00000535878.5, ENST00000539841.1, ENST00000542795.5, ENST00000542904.1, ENST00000544707.1, ENST00000545207.5

Found 334 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGGTGGCCAGTGGGGAAGGGCTAGACAGAAGAATGGCAGGGCCTaGGTTGCAGGGAGAACAAGGGCAGGGATGGCTGAACCTTTGAAC +
Preference number: 1 (lower is better)
Translates to: EGGQWGRARQKNGRA*VAGRTRAGMAEPLN
Trigger: GTTCAAAGGTTCAGCCATCCCTGCCCTTGTTCTCCCTGCAACCCAGGCCCTGCCATTCTTCTGTCTAGCCCTTCCCCACTGGCCACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
3UTR-3UTR GCA 90 bp GGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAGGACCTATACTCCTAAGGTaGCTGGCTAGGATCAGTCTC +
Preference number: 2 (lower is better)
Translates to: GGGDGDTFTKLSEGFILGPILLR*LARISL
Trigger: GAGACTGATCCTAGCCAGGCACCTTAGGAGTATAGG...TCCTAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
3UTR TCA 72 bp GGCCTGGGTTGCAGGGAGAACAAGGGCAGGGATGGCTaGACCTTTGAACTGGCCAGGGCTGGGCAGGAGGCT +
Preference number: 3 (lower is better)
Translates to: GLGCRENKGRDG*TFELARAGQEA
Trigger: AGCCTCCTGCCCAGCCCTGGCCAGTTCAAAGGTTCAGCCATCCCTGCCCTTGTTCTCCCTGCAACCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR TCA 90 bp GGGGAAGGTGGCCAGTGGGGAAGGGCTAGACAGAAGAATGGCAGGGCCTGGGTTAGCAGGGCAGCGGCCTaGGTGGTATGCCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GEGGQWGRARQKNGRAWVSRAAA*VVCRPR
Trigger: CCTGGGCCGGCATACCACTCAGGCCGCTGCCCTGCT...AACCCAGGCCCTGCCATTCTTCTGTCTAGCCCTTCCCCACTGGCCACCTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR GCA 90 bp GGGGAAGGTGGCCAGTGGGGAAGGGCTAGACAGAAGAATGGCAGGGCCTGGGTTCTAGGGGCCGGCAGCTaGTGTAGTAGGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GEGGQWGRARQKNGRAWVLGAGS*CSRAAQ
Trigger: CTGAGCTGCCCTACTACAGCAGCTGCCGGCCCCTAG...AACCCAGGCCCTGCCATTCTTCTGTCTAGCCCTTCCCCACTGGCCACCTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR GCA 90 bp GGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGGGTGGGGCTGAAGGCTaGACCGGAGCCGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GFILGGWTYMGPPYTPKVGGAEG*TGAAGC
Trigger: GCAGCCAGCGGCTCCGGTGCAGCCTTCAGCCCCACC...CACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp GATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCAGTGGTGGGGCTGAAGGCTaGACCGGAGCCGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: DGPIWGLPILLRCLARISGGAEG*TGAAGC
Trigger: GCAGCCAGCGGCTCCGGTGCAGCCTTCAGCCCCACC...ACTGATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp ATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCCAAGATGGCCCCTCCTaGCAGGAGCAGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: ILGGWTYMGPPYTPKVPGQDGPS*QEQGSG
Trigger: GCCGCTGCCCTGCTCCTGGCAGGAGGGGCCATCTTG...GCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCAGTGGCGGGCGACAGTGGTaGACAGGGGTGGCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: DGPIWGLPILLRCLARISGGRQW*TGVAAV
Trigger: CACAGCCGCCACCCCTGTCCACCACTGTCGCCCGCC...ACTGATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CCA 90 bp GAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCAACGCCACTGGGGGATaGCGTAGGCCAGGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: EDGPIWGLPILLRCLARINATGG*RRPGRA
Trigger: TGCCCGGCCTGGCCTACGCCATCCCCCAGTGGCGTT...GATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR TCA 90 bp CTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTAGCAGGGCAGCGGCCTaGGTGGTATGCCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LSEGFILGGWTYMGPPYTSRAAA*VVCRPR
Trigger: CCTGGGCCGGCATACCACTCAGGCCGCTGCCCTGCT...AGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp GGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAGGACAAGATGGCCCCTCCTaGCAGGAGCAGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GGGDGDTFTKLSEGFILGQDGPS*QEQGSG
Trigger: GCCGCTGCCCTGCTCCTGGCAGGAGGGGCCATCTTG...TCCTAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GGGGAAGGTGGCCAGTGGGGAAGGGCTAGACAGAAGAATGGCAGGGCCTGGGTTTCGGGAGGCCCAGTATaGCTACATGCAGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: GEGGQWGRARQKNGRAWVSGGPV*LHAGTG
Trigger: TCCAGTTCCTGCATGTAGCCATACTGGGCCTCCCGA...AACCCAGGCCCTGCCATTCTTCTGTCTAGCCCTTCCCCACTGGCCACCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CCA 90 bp GGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAGGACTGCACCGGAGCCGCTaGCTGCCAGCAGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GGGDGDTFTKLSEGFILGLHRSR*LPAAGS
Trigger: GCTACCTGCTGCTGGCAGCCAGCGGCTCCGGTGCAG...TCCTAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp CAAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTAAACGCCACTGGGGGATaGCGTAGGCCAGGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: QALRRLHPRRMDLYGASLNATGG*RRPGRA
Trigger: TGCCCGGCCTGGCCTACGCCATCCCCCAGTGGCGTT...TAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAGGAGGGCAGCGGCCTGAGTaGTATGCCGGCCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GGGDGDTFTKLSEGFILGGQRPE*YAGPGS
Trigger: GCTACCTGGGCCGGCATACCACTCAGGCCGCTGCCC...TCCTAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCAGTGGGCAGCGGCCTGAGTaGTATGCCGGCCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: DGPIWGLPILLRCLARISGQRPE*YAGPGS
Trigger: GCTACCTGGGCCGGCATACCACTCAGGCCGCTGCCC...ACTGATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR TCA 90 bp CAAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTACCCAGGCCTGGTCCGTaGGGCTGTAGAGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: QALRRLHPRRMDLYGASLPRPGP*GCRGIL
Trigger: GAGGATCCCTCTACAGCCTCACGGACCAGGCCTGGG...TAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp CTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCACCGGAGCCGCTGGCTaGCAGCAGCAGGTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LRRLHPRRMDLYGASLYSTGAAG*QQQVAA
Trigger: TGCAGCTACCTGCTGCTGGCAGCCAGCGGCTCCGGT...GGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp GGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAGGAACCGGAGCCGCTGGCTaGCAGCAGCAGGTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GGGDGDTFTKLSEGFILGTGAAG*QQQVAA
Trigger: TGCAGCTACCTGCTGCTGGCAGCCAGCGGCTCCGGT...TCCTAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp CAAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTACCAGCGGGGACACCATaGTTCCCACGCGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: QALRRLHPRRMDLYGASLPAGTP*FPRGST
Trigger: TGTGGACCCGCGTGGGAAGCATGGTGTCCCCGCTGG...TAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GGGGAAGGTGGCCAGTGGGGAAGGGCTAGACAGAAGAATGGCAGGGCCTGGGTTGCTACATGCAGGAACTaGAAATGGCCCATGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GEGGQWGRARQKNGRAWVATCRN*KWPMLP
Trigger: GGGAAGCATGGGCCATTTCCAGTTCCTGCATGTAGC...AACCCAGGCCCTGCCATTCTTCTGTCTAGCCCTTCCCCACTGGCCACCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CCA 90 bp TCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAGCACCCAAGGCCCTGTaGAGGCATTGTGGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SGGGDGDTFTKLSEGFILAPKAL*RHCGAG
Trigger: GCCCGCCCCACAATGCCTCCACAGGGCCTTGGGTGC...TAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CCA 90 bp GCTCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTCCCATTTGGGCCCATaGGGAGCACCCAAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ALVVVMETPSPSSQKASSSHLGP*GAPKAL
Trigger: CAGGGCCTTGGGTGCTCCCCATGGGCCCAAATGGGA...GGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CCA 90 bp GAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCCCAGCCATCCAGGCATaGCTCCATGGCCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: EDGPIWGLPILLRCLARIPAIQA*LHGPLG
Trigger: ACCCAGAGGGCCATGGAGCCATGCCTGGATGGCTGG...GATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp TCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTACTGCACCGGAGCCGCTaGCTGCCAGCAGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: SGGGDGDTFTKLSEGFILLHRSR*LPAAGS
Trigger: GCTACCTGCTGCTGGCAGCCAGCGGCTCCGGTGCAG...TAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp CTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCCCCTCTGGGTGTCATTaGGCAGGCTGGTGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: LRRLHPRRMDLYGASLYSPSGCH*AGWWPG
Trigger: ACCCGGCCACCAGCCTGCCCAATGACACCCAGAGGG...GGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545207.5
CDS-3UTR TCA 90 bp GAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGCCCAGGCCTGGTCCGTaGGGCTGTAGAGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: EGFILGGWTYMGPPYTPKPRPGP*GCRGIL
Trigger: GAGGATCCCTCTACAGCCTCACGGACCAGGCCTGGG...CTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR TCA 90 bp GCTCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCGGATGGCTGAACCTTTaGACTGGCCAGGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ALVVVMETPSPSSQKASSGWLNL*TGQGWA
Trigger: TGCCCAGCCCTGGCCAGTTCAAAGGTTCAGCCATCC...GGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR GCA 90 bp AAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATCCAGCGGGGACACCATaGTTCCCACGCGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: KLSEGFILGGWTYMGPPYPAGTP*FPRGST
Trigger: TGTGGACCCGCGTGGGAAGCATGGTGTCCCCGCTGG...ATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp CTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTGTGGAGGCATTGTaGGGCGGGCGACAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LSEGFILGGWTYMGPPYTPVEAL*GGRQWW
Trigger: CCACCACTGTCGCCCGCCCCACAATGCCTCCACAGG...AGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CCA 90 bp GCTCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCCTCAGGCTTCCCATTTaGGCCCATGGGGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: ALVVVMETPSPSSQKASSLRLPI*AHGEHP
Trigger: TGGGTGCTCCCCATGGGCCCAAATGGGAAGCCTGAG...GGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CCA 90 bp CTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCCCCTCTGGGTGTCATTaGGCAGGCTGGCATTGGGCG +
Preference number: 4 (lower is better)
Translates to: LRRLHPRRMDLYGASLYSPSGCH*AGWHWA
Trigger: CGCCCAATGCCAGCCTGCCCAATGACACCCAGAGGG...GGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CCA 90 bp GGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGGGCTCCATGGCCCTCTaGGTGTCATTGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GFILGGWTYMGPPYTPKVGSMAL*VSLGRL
Trigger: CAGCCTGCCCAATGACACCCAGAGGGCCATGGAGCC...CACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp CAAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTAGGCTCCATGGCCCTCTaGGTGTCATTGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QALRRLHPRRMDLYGASLGSMAL*VSLGRL
Trigger: CAGCCTGCCCAATGACACCCAGAGGGCCATGGAGCC...TAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp CTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCACGAGCCAGAGCTGGTaGCCGGGTCTGGATCCGATG +
Preference number: 4 (lower is better)
Translates to: LRRLHPRRMDLYGASLYSTSQSW*PGLDPM
Trigger: CATCGGATCCAGACCCGGCCACCAGCTCTGGCTCGT...GGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR TCA 90 bp GGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCAGGGGTGGCGGCTGTaGAGATCTGCAGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: GFILGGWTYMGPPYTPKVQGWRL*RSAAGC
Trigger: ACAACCTGCTGCAGATCTTCACAGCCGCCACCCCTG...CACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR TCA 90 bp ATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCGCTGTACCTCACCCGTaGTTTTCACCAGCGGGGACA +
Preference number: 4 (lower is better)
Translates to: ILGGWTYMGPPYTPKVPGAVPHP*FSPAGT
Trigger: TGTCCCCGCTGGTGAAAATCACGGGTGAGGTACAGC...GCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR TCA 90 bp GGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAGGAGTCTCTGGCAAGGGCTaGTTCAGGGTCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GGGDGDTFTKLSEGFILGVSGKG*FRVSGR
Trigger: CCTGCCTGAGACCCTGAATCAGCCCTTGCCAGAGAC...TCCTAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR TCA 90 bp GGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGGTCTCTGGCAAGGGCTaGTTCAGGGTCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GFILGGWTYMGPPYTPKVVSGKG*FRVSGR
Trigger: CCTGCCTGAGACCCTGAATCAGCCCTTGCCAGAGAC...CACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp GAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCAGGTCAGGATGGGCCTaGGGCCAAACCTGTCAGACA +
Preference number: 4 (lower is better)
Translates to: EDGPIWGLPILLRCLARIRSGWA*GQTCQT
Trigger: TGTCTGACAGGTTTGGCCGCAGGCCCATCCTGACCT...GATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp TTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTCCAGCAGCAGGTAGCTaGAGGTCAGGATGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: FILGGWTYMGPPYTPKVPPAAGS*RSGWAC
Trigger: GCAGGCCCATCCTGACCTGCAGCTACCTGCTGCTGG...AGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp CTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCAGCAGCAGGTAGCTaGAGGTCAGGATGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LSEGFILGGWTYMGPPYTPAAGS*RSGWAC
Trigger: GCAGGCCCATCCTGACCTGCAGCTACCTGCTGCTGG...AGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp GAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCGTAGCAGTACCCGAGTaGTGTCGACATGATGGCCCG +
Preference number: 4 (lower is better)
Translates to: EDGPIWGLPILLRCLARIVAVPE*CRHDGP
Trigger: CGGGCCATCATGTCGACAGCACTCGGGTACTGCTAC...GATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp GGGGAAGGTGGCCAGTGGGGAAGGGCTAGACAGAAGAATGGCAGGGCCTGGGTTAAGGAGATCTCCTTCTaGAGGTTGAGTTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GEGGQWGRARQKNGRAWVKEISF*RLSLSS
Trigger: GGAGCTCAAACTCAACCTGCAGAAGGAGATCTCCTT...AACCCAGGCCCTGCCATTCTTCTGTCTAGCCCTTCCCCACTGGCCACCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR GCA 90 bp GCTCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCCCGGAACAGGTCACTTaGGGTGTACTTGGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ALVVVMETPSPSSQKASSPEQVT*GVLGLG
Trigger: GCCAAGGCCAAGTACACCGCAAGTGACCTGTTCCGG...GGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp ATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTCCACCTCTGGCTCCTaGTTTGGCTTCTTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: ILGGWTYMGPPYTPKVPGSTSGS*FGFFAR
Trigger: GCGGGCAAAGAAGCCAAAGCAGGAGCCAGAGGTGGA...GCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp TCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTATGGCAGGGCCTGGGTTaGAGGGAGAACAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SGGGDGDTFTKLSEGFILWQGLG*RENKGR
Trigger: CCTGCCCTTGTTCTCCCTGCAACCCAGGCCCTGCCA...TAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CCA 90 bp GATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCAGTCCAGGCATGGCTCCATaGCCCTCTGGGTGTCATTGG +
Preference number: 4 (lower is better)
Translates to: DGPIWGLPILLRCLARISPGMAP*PSGCHW
Trigger: CCAATGACACCCAGAGGGCCATGGAGCCATGCCTGG...ACTGATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp TTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTCCAGCCATCCAGGCATaGCTCCATGGCCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: FILGGWTYMGPPYTPKVPPAIQA*LHGPLG
Trigger: ACCCAGAGGGCCATGGAGCCATGCCTGGATGGCTGG...AGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp TCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAAAGACGAGCCAGAGCTaGTGGCCGGGTCTGGATCCG +
Preference number: 4 (lower is better)
Translates to: SGGGDGDTFTKLSEGFILKTSQS*WPGLDP
Trigger: CGGATCCAGACCCGGCCACCAGCTCTGGCTCGTCTT...TAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CCA 90 bp TCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTATCCGTTGTCCTCAGCTaGAGCCCAGGCCTGGTCCGT +
Preference number: 4 (lower is better)
Translates to: SGGGDGDTFTKLSEGFILSVVLS*SPGLVR
Trigger: ACGGACCAGGCCTGGGCTCCAGCTGAGGACAACGGA...TAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGTCCGTTGTCCTCAGCTaGAGCCCAGGCCTGGTCCGT +
Preference number: 4 (lower is better)
Translates to: EGFILGGWTYMGPPYTPKSVVLS*SPGLVR
Trigger: ACGGACCAGGCCTGGGCTCCAGCTGAGGACAACGGA...CTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGCATTGGGCAGGCTGGTaGCCGGGTCTGGATCCGATG +
Preference number: 4 (lower is better)
Translates to: EGFILGGWTYMGPPYTPKHWAGW*PGLDPM
Trigger: CATCGGATCCAGACCCGGCCACCAGCCTGCCCAATG...CTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545207.5
CDS-3UTR CCA 90 bp CTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTTGTCATTGGGCAGGCTaGTGGCCGGGTCTGGATCCG +
Preference number: 4 (lower is better)
Translates to: LSEGFILGGWTYMGPPYTCHWAG*WPGLDP
Trigger: CGGATCCAGACCCGGCCACCAGCCTGCCCAATGACA...AGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545207.5
CDS-3UTR TCA 90 bp GCTCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCGCTCAGGGTAATGCCTaGGATGCCAAAGCCACACAG +
Preference number: 4 (lower is better)
Translates to: ALVVVMETPSPSSQKASSAQGNA*DAKATQ
Trigger: CTGTGTGGCTTTGGCATCTCAGGCATTACCCTGAGC...GGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR TCA 90 bp GATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCAGTCTTCCTTCTTGCCATTaGAGACAGCCACCCGCCGGA +
Preference number: 4 (lower is better)
Translates to: DGPIWGLPILLRCLARISLPSCH*RQPPAG
Trigger: TCCGGCGGGTGGCTGTCTTCAATGGCAAGAAGGAAG...ACTGATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR TCA 90 bp GATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCAGTGCTGTACCTCACCCGTaGTTTTCACCAGCGGGGACA +
Preference number: 4 (lower is better)
Translates to: DGPIWGLPILLRCLARISAVPHP*FSPAGT
Trigger: TGTCCCCGCTGGTGAAAATCACGGGTGAGGTACAGC...ACTGATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp GGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGAGGTCAGGATGGGCCTaGGGCCAAACCTGTCAGACA +
Preference number: 4 (lower is better)
Translates to: GFILGGWTYMGPPYTPKVRSGWA*GQTCQT
Trigger: TGTCTGACAGGTTTGGCCGCAGGCCCATCCTGACCT...CACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp GCTCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCATGGACACAGTTAACTaGAGCCAACGCCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: ALVVVMETPSPSSQKASSMDTVN*SQRHWG
Trigger: CCCCCAGTGGCGTTGGCTGCAGTTAACTGTGTCCAT...GGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp GATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCAGTCCGGAACAGGTCACTTaGGGTGTACTTGGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: DGPIWGLPILLRCLARISPEQVT*GVLGLG
Trigger: GCCAAGGCCAAGTACACCGCAAGTGACCTGTTCCGG...ACTGATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp ATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTGCAGGAACTGGAAATaGCCCATGCTTCCCACACGG +
Preference number: 4 (lower is better)
Translates to: ILGGWTYMGPPYTPKVPGCRNWK*PMLPTR
Trigger: CCGTGTGGGAAGCATGGGCCATTTCCAGTTCCTGCA...GCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CCA 90 bp TTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTCCAGGCATGGCTCCATaGCCCTCTGGGTGTCATTGG +
Preference number: 4 (lower is better)
Translates to: FILGGWTYMGPPYTPKVPPGMAP*PSGCHW
Trigger: CCAATGACACCCAGAGGGCCATGGAGCCATGCCTGG...AGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGTCATGCGGCGCAGCATaGGTATCCGGAACAGGTCAC +
Preference number: 4 (lower is better)
Translates to: GFILGGWTYMGPPYTPKVSCGAA*VSGTGH
Trigger: GTGACCTGTTCCGGATACCCATGCTGCGCCGCATGA...CACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp CTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCAGAAGGTCATGGCACTaGGGCAAGACGAGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LRRLHPRRMDLYGASLYSRRSWH*GKTSQS
Trigger: GCTCTGGCTCGTCTTGCCCCAGTGCCATGACCTTCT...GGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CCA 90 bp CTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTCTCCGAGAAGGTCATaGCACTGGGGCAAGACGAGC +
Preference number: 4 (lower is better)
Translates to: LRRLHPRRMDLYGASLYSSPRRS*HWGKTS
Trigger: GCTCGTCTTGCCCCAGTGCCATGACCTTCTCGGAGA...GGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR TCA 90 bp AAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATTGTGGTTGGCCATGTTaGGGATCGGGAGGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: KLSEGFILGGWTYMGPPYCGWPC*GSGGPV
Trigger: TACTGGGCCTCCCGATCCTCAACATGGCCAACCACA...ATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR TCA 90 bp GAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCCGACCCCACCAAAGATaGTCTGGAGGATGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: EDGPIWGLPILLRCLARIRPHQR*SGGCRG
Trigger: ACCTCTACATCCTCCAGATCATCTTTGGTGGGGTCG...GATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR TCA 90 bp GAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCGGTGATCAGTGTAGTTaGGGTCCCTGCTCTGTCCTA +
Preference number: 4 (lower is better)
Translates to: EDGPIWGLPILLRCLARIGDQCS*GPCSVL
Trigger: TAGGACAGAGCAGGGACCTCAACTACACTGATCACC...GATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR TCA 90 bp CTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCAGGCTCTGGTGGTGGTaGTGGAGACACCTTCACCAA +
Preference number: 4 (lower is better)
Translates to: LRRLHPRRMDLYGASLYSRLWWW*WRHLHQ
Trigger: TTGGTGAAGGTGTCTCCATCACCACCACCAGAGCCT...GGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR TCA 90 bp AAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATAAGGGCAGGGATGGCTaGACCTTTGAACTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KLSEGFILGGWTYMGPPYKGRDG*TFELAR
Trigger: CCTGGCCAGTTCAAAGGTTCAGCCATCCCTGCCCTT...ATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR GCA 90 bp CTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCACTGGAAATGGCCCATaGTTCCCACACGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LRRLHPRRMDLYGASLYSTGNGP*FPHGPG
Trigger: TCCTGGACCGTGTGGGAAGCATGGGCCATTTCCAGT...GGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR GCA 90 bp AAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATGCGGCTGTGAAGATCTaGAGCAGGTTGTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: KLSEGFILGGWTYMGPPYAAVKI*SRLWLA
Trigger: GGCCAACCACAACCTGCTGCAGATCTTCACAGCCGC...ATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR GCA 90 bp CTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTGTAGCAGTACCCGAGTaGTGTCGACATGATGGCCCG +
Preference number: 4 (lower is better)
Translates to: LSEGFILGGWTYMGPPYTVAVPE*CRHDGP
Trigger: CGGGCCATCATGTCGACAGCACTCGGGTACTGCTAC...AGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp GGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAGGAATGGACACAGTTAACTaGAGCCAACGCCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGGDGDTFTKLSEGFILGMDTVN*SQRHWG
Trigger: CCCCCAGTGGCGTTGGCTGCAGTTAACTGTGTCCAT...TCCTAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp ATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCAAAGACAGAAGGTCATaGGGCGCAGCATGGGTATCC +
Preference number: 4 (lower is better)
Translates to: ILGGWTYMGPPYTPKVPGKDRRS*GAAWVS
Trigger: GGATACCCATGCTGCGCCGCATGACCTTCTGTCTTT...GCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp CTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTTCCACCTCTGGCTCCTaGTTTGGCTTCTTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LSEGFILGGWTYMGPPYTSTSGS*FGFFAR
Trigger: GCGGGCAAAGAAGCCAAAGCAGGAGCCAGAGGTGGA...AGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAGGAAGACCAACCAGCGTATaGACTCTGGTGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GGGDGDTFTKLSEGFILGRPTSV*TLVSTR
Trigger: CCTGGTGGACACCAGAGTCCATACGCTGGTTGGTCT...TCCTAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGAGACCAACCAGCGTATaGACTCTGGTGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GFILGGWTYMGPPYTPKVRPTSV*TLVSTR
Trigger: CCTGGTGGACACCAGAGTCCATACGCTGGTTGGTCT...CACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp ATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCCGGTGTACTTGGCCTTaGCCAAGGAGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: ILGGWTYMGPPYTPKVPGRCTWP*PRRSPS
Trigger: AGAAGGAGATCTCCTTGGCCAAGGCCAAGTACACCG...GCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp ATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCCACTTGCGGTGTACTTaGCCTTGGCCAAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: ILGGWTYMGPPYTPKVPGHLRCT*PWPRRS
Trigger: AGATCTCCTTGGCCAAGGCCAAGTACACCGCAAGTG...GCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp AAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATTCATGCGGCGCAGCATaGGTATCCGGAACAGGTCAC +
Preference number: 4 (lower is better)
Translates to: KLSEGFILGGWTYMGPPYSCGAA*VSGTGH
Trigger: GTGACCTGTTCCGGATACCCATGCTGCGCCGCATGA...ATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp ATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCGGTGATGAACTTGGCTaGGACATCGACCCCACCAAA +
Preference number: 4 (lower is better)
Translates to: ILGGWTYMGPPYTPKVPGGDELG*DIDPTK
Trigger: TTTGGTGGGGTCGATGTCCCAGCCAAGTTCATCACC...GCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GCTCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTGTAGAGGGATCCTCTaGGAGGCCTTTTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: ALVVVMETPSPSSQKASSCRGIL*EAFSTS
Trigger: AGAGGTGGAAAAGGCCTCCCAGAGGATCCCTCTACA...GGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR TCA 90 bp TTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGCTCAGGGTAATGCCTaGGATGCCAAAGCCACACAG +
Preference number: 4 (lower is better)
Translates to: FILGGWTYMGPPYTPKVPAQGNA*DAKATQ
Trigger: CTGTGTGGCTTTGGCATCTCAGGCATTACCCTGAGC...AGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR TCA 90 bp GGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAGGACGACCCCACCAAAGATaGTCTGGAGGATGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: GGGDGDTFTKLSEGFILGRPHQR*SGGCRG
Trigger: ACCTCTACATCCTCCAGATCATCTTTGGTGGGGTCG...TCCTAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR TCA 90 bp CTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCGGTGATCAGTGTAGTTaGGGTCCCTGCTCTGTCCTA +
Preference number: 4 (lower is better)
Translates to: LRRLHPRRMDLYGASLYSGDQCS*GPCSVL
Trigger: TAGGACAGAGCAGGGACCTCAACTACACTGATCACC...GGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR TCA 90 bp AAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATAGGCTCTGGTGGTGGTaGTGGAGACACCTTCACCAA +
Preference number: 4 (lower is better)
Translates to: KLSEGFILGGWTYMGPPYRLWWW*WRHLHQ
Trigger: TTGGTGAAGGTGTCTCCATCACCACCACCAGAGCCT...ATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCTCACAATGGAGTCCTTaGTGCTGTTGTAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: EDGPIWGLPILLRCLARISQWSP*CCCRPS
Trigger: GCTGGGTCTACAACAGCACCAAGGACTCCATTGTGA...GATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCGGTGTACTTGGCCTTaGCCAAGGAGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GFILGGWTYMGPPYTPKVRCTWP*PRRSPS
Trigger: AGAAGGAGATCTCCTTGGCCAAGGCCAAGTACACCG...CACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GCTCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCGAGGATGGACCTATATaGGGCCTCCCTATACTCCTA +
Preference number: 4 (lower is better)
Translates to: ALVVVMETPSPSSQKASSEDGPI*GLPILL
Trigger: TAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTC...GGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCAGTTTCATCCTAGGAGGATaGACCTATATGGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: DGPIWGLPILLRCLARISFILGG*TYMGPP
Trigger: GGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAA...ACTGATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp CTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTAAGAATGGCAGGGCCTaGGTTGCAGGGAGAACAAGG +
Preference number: 4 (lower is better)
Translates to: LSEGFILGGWTYMGPPYTKNGRA*VAGRTR
Trigger: CCTTGTTCTCCCTGCAACCCAGGCCCTGCCATTCTT...AGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR TCA 90 bp GAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCGGAGGATGTAGAGGTTaGCTCCAAATTCTTCCACAC +
Preference number: 4 (lower is better)
Translates to: EDGPIWGLPILLRCLARIGGCRG*LQILPH
Trigger: GTGTGGAAGAATTTGGAGTCAACCTCTACATCCTCC...GATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp CTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCCAGTATGGCTACATaGAGGAACTGGAAATGGCCC +
Preference number: 4 (lower is better)
Translates to: LSEGFILGGWTYMGPPYTPSMAT*RNWKWP
Trigger: GGGCCATTTCCAGTTCCTGCATGTAGCCATACTGGG...AGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR GCA 90 bp CAAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTACAATGGAGTCCTTGGTaGTGTTGTAGACCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: QALRRLHPRRMDLYGASLQWSPW*CCRPSH
Trigger: ATGGCTGGGTCTACAACAGCACCAAGGACTCCATTG...TAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp AAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATAAAGACAGAAGGTCATaGGGCGCAGCATGGGTATCC +
Preference number: 4 (lower is better)
Translates to: KLSEGFILGGWTYMGPPYKDRRS*GAAWVS
Trigger: GGATACCCATGCTGCGCCGCATGACCTTCTGTCTTT...ATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp CAAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTAACGCCCATACCTGTTTaGCTGATGACTGTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: QALRRLHPRRMDLYGASLTPIPV*LMTVGY
Trigger: ATACCCCACAGTCATCAGGCAAACAGGTATGGGCGT...TAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp CTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCCCTATACTCCTAAGGTaGCTGGCTAGGATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LRRLHPRRMDLYGASLYSPILLR*LARISL
Trigger: GAGACTGATCCTAGCCAGGCACCTTAGGAGTATAGG...GGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAGGAATCTGCAGCAGGTTGTaGTTGGCCATGTTGAGGATC +
Preference number: 4 (lower is better)
Translates to: GGGDGDTFTKLSEGFILGICSRL*LAMLRI
Trigger: GATCCTCAACATGGCCAACCACAACCTGCTGCAGAT...TCCTAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CCA 90 bp CTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTTGTCATTGGGCAGGCTaGCATTGGGCGGATGTACAA +
Preference number: 4 (lower is better)
Translates to: LSEGFILGGWTYMGPPYTCHWAG*HWADVQ
Trigger: TTGTACATCCGCCCAATGCCAGCCTGCCCAATGACA...AGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CCA 90 bp GGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGTCACAATGGAGTCCTTaGTGCTGTTGTAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: GFILGGWTYMGPPYTPKVSQWSP*CCCRPS
Trigger: GCTGGGTCTACAACAGCACCAAGGACTCCATTGTGA...CACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp CTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCCCCACTCTGTCACAATaGAGTCCTTGGTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LRRLHPRRMDLYGASLYSPTLSQ*SPWCCC
Trigger: ACAACAGCACCAAGGACTCCATTGTGACAGAGTGGG...GGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGCACTTGCGGTGTACTTaGCCTTGGCCAAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: EGFILGGWTYMGPPYTPKHLRCT*PWPRRS
Trigger: AGATCTCCTTGGCCAAGGCCAAGTACACCGCAAGTG...CTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp CTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTGGTGATGAACTTGGCTaGGACATCGACCCCACCAAA +
Preference number: 4 (lower is better)
Translates to: LSEGFILGGWTYMGPPYTGDELG*DIDPTK
Trigger: TTTGGTGGGGTCGATGTCCCAGCCAAGTTCATCACC...AGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp GGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGGTCTTCGATAGTCTCTaGCAAGGGCTGATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GFILGGWTYMGPPYTPKVVFDSL*QGLIQG
Trigger: ACCCTGAATCAGCCCTTGCCAGAGACTATCGAAGAC...CACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp TTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTTGTAGAGGGATCCTCTaGGAGGCCTTTTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: FILGGWTYMGPPYTPKVPCRGIL*EAFSTS
Trigger: AGAGGTGGAAAAGGCCTCCCAGAGGATCCCTCTACA...AGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp TCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTATTCATCCTAGGAGGATaGACCTATATGGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SGGGDGDTFTKLSEGFILFILGG*TYMGPP
Trigger: GGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAA...TAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp TCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAACGCCCATACCTGTTTaGCTGATGACTGTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: SGGGDGDTFTKLSEGFILTPIPV*LMTVGY
Trigger: ATACCCCACAGTCATCAGGCAAACAGGTATGGGCGT...TAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp TCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTACCTATACTCCTAAGGTaGCTGGCTAGGATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SGGGDGDTFTKLSEGFILPILLR*LARISL
Trigger: GAGACTGATCCTAGCCAGGCACCTTAGGAGTATAGG...TAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp CTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCCACTCTGTCACAATaGAGTCCTTGGTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LSEGFILGGWTYMGPPYTPTLSQ*SPWCCC
Trigger: ACAACAGCACCAAGGACTCCATTGTGACAGAGTGGG...AGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp TCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAGTCTTCGATAGTCTCTaGCAAGGGCTGATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SGGGDGDTFTKLSEGFILVFDSL*QGLIQG
Trigger: ACCCTGAATCAGCCCTTGCCAGAGACTATCGAAGAC...TAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp TCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAGAGGATGGACCTATATaGGGCCTCCCTATACTCCTA +
Preference number: 4 (lower is better)
Translates to: SGGGDGDTFTKLSEGFILEDGPI*GLPILL
Trigger: TAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTC...TAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR TCA 90 bp CTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTGGAGGATGTAGAGGTTaGCTCCAAATTCTTCCACAC +
Preference number: 4 (lower is better)
Translates to: LSEGFILGGWTYMGPPYTGGCRG*LQILPH
Trigger: GTGTGGAAGAATTTGGAGTCAACCTCTACATCCTCC...AGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp TTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTTCAGTTTGTTGGAGTTaGACACCAAGTCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: FILGGWTYMGPPYTPKVPSVCWS*TPSPTL
Trigger: CAGAGTGGGACTTGGTGTGCAACTCCAACAAACTGA...AGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp GAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGAAGGAGATCTCCTTCTaGAGGTTGAGTTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: EGFILGGWTYMGPPYTPKKEISF*RLSLSS
Trigger: GGAGCTCAAACTCAACCTGCAGAAGGAGATCTCCTT...CTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp AAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATAGACGAAGAAGGGAATaGACACAGTTAACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: KLSEGFILGGWTYMGPPYRRRRE*TQLTAA
Trigger: GGCTGCAGTTAACTGTGTCCATTCCCTTCTTCGTCT...ATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CCA 90 bp TCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAAGACGAAGAAGGGAATaGACACAGTTAACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGGGDGDTFTKLSEGFILRRRRE*TQLTAA
Trigger: GGCTGCAGTTAACTGTGTCCATTCCCTTCTTCGTCT...TAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp GAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGTCCAATCAGTATACCTaGCATGAAGATAGACTGGGC +
Preference number: 4 (lower is better)
Translates to: EGFILGGWTYMGPPYTPKSNQYT*HEDRLG
Trigger: GCCCAGTCTATCTTCATGGCAGGTATACTGATTGGA...CTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR GCA 90 bp TCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTATCCAATCAGTATACCTaGCATGAAGATAGACTGGGC +
Preference number: 4 (lower is better)
Translates to: SGGGDGDTFTKLSEGFILSNQYT*HEDRLG
Trigger: GCCCAGTCTATCTTCATGGCAGGTATACTGATTGGA...TAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR TCA 90 bp ATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCCTTATCGCTGTTTATTaGAACCTCCCATCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: ILGGWTYMGPPYTPKVPGLIAVY*NLPSKK
Trigger: TTTCTTTGATGGGAGGTTTCAATAAACAGCGATAAG...GCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS GCA 90 bp GTAGATGGGGAAGGTGGGGCTGAAGGCTGCACCGGAGCCGCTGGCTaGCAGCAGCAGGTAGCTGCAGGTCAGGATGGGCCTGCGGCCAAA +
Preference number: 5 (lower is better)
Translates to: VDGEGGAEGCTGAAG*QQQVAAGQDGPAAK
Trigger: TTTGGCCGCAGGCCCATCCTGACCTGCAGCTACCTGCTGCTGGCAGCCAGCGGCTCCGGTGCAGCCTTCAGCCCCACCTTCCCCATCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000542795.5
ENST00000542904.1
ENST00000545207.5
CDS CCA 90 bp GGGAGCACCCAAGGCCCTGTGGAGGCATTGTGGGGCGGGCGACAGTaGTGGACAGGGGTGGCGGCTGTGAAGATCTGCAGCAGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: GSTQGPVEALWGGRQ*WTGVAAVKICSRLW
Trigger: CCACAACCTGCTGCAGATCTTCACAGCCGCCACCCCTGTCCACCACTGTCGCCCGCCCCACAATGCCTCCACAGGGCCTTGGGTGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS CCA 90 bp CCATTTGGGCCCATGGGGAGCACCCAAGGCCCTGTGGAGGCATTGTaGGGCGGGCGACAGTGGTGGACAGGGGTGGCGGCTGTGAAGATC +
Preference number: 5 (lower is better)
Translates to: PFGPMGSTQGPVEAL*GGRQWWTGVAAVKI
Trigger: GATCTTCACAGCCGCCACCCCTGTCCACCACTGTCGCCCGCCCCACAATGCCTCCACAGGGCCTTGGGTGCTCCCCATGGGCCCAAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS GCA 90 bp TGGGGCGGGCGACAGTGGTGGACAGGGGTGGCGGCTGTGAAGATCTaGAGCAGGTTGTGGTTGGCCATGTTGAGGATCGGGAGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: WGGRQWWTGVAAVKI*SRLWLAMLRIGRPS
Trigger: ACTGGGCCTCCCGATCCTCAACATGGCCAACCACAACCTGCTGCAGATCTTCACAGCCGCCACCCCTGTCCACCACTGTCGCCCGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS GCA 90 bp CAGGAAGCGGAAGACCATGTAGATGGGGAAGGTGGGGCTGAAGGCTaGACCGGAGCCGCTGGCTGCCAGCAGCAGGTAGCTGCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: QEAEDHVDGEGGAEG*TGAAGCQQQVAAGQ
Trigger: CTGACCTGCAGCTACCTGCTGCTGGCAGCCAGCGGCTCCGGTGCAGCCTTCAGCCCCACCTTCCCCATCTACATGGTCTTCCGCTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000542795.5
ENST00000542904.1
ENST00000545207.5
CDS CCA 90 bp AGCACCCAAGGCCCTGTGGAGGCATTGTGGGGCGGGCGACAGTGGTaGACAGGGGTGGCGGCTGTGAAGATCTGCAGCAGGTTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: STQGPVEALWGGRQW*TGVAAVKICSRLWL
Trigger: CAACCACAACCTGCTGCAGATCTTCACAGCCGCCACCCCTGTCCACCACTGTCGCCCGCCCCACAATGCCTCCACAGGGCCTTGGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS TCA 90 bp CTGGTGGCCGGGTCTGGATCCGATGGGGCTGGTGATCAGTGTAGTTaGGGTCCCTGCTCTGTCCTAGGGGCCGGCAGCTGCTGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: LVAGSGSDGAGDQCS*GPCSVLGAGSCCSR
Trigger: CCTACTACAGCAGCTGCCGGCCCCTAGGACAGAGCAGGGACCTCAACTACACTGATCACCAGCCCCATCGGATCCAGACCCGGCCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS CCA 90 bp ATCAGTCTCTGGAGGGCAGGGAAAGGGGGTTCCGTTGTCCTCAGCTaGAGCCCAGGCCTGGTCCGTGAGGCTGTAGAGGGATCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: ISLWRAGKGGSVVLS*SPGLVREAVEGSSG
Trigger: CCCAGAGGATCCCTCTACAGCCTCACGGACCAGGCCTGGGCTCCAGCTGAGGACAACGGAACCCCCTTTCCCTGCCCTCCAGAGACTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336232.7
ENST00000451262.1
ENST00000539841.1
ENST00000545207.5
CDS CCA 90 bp AATGGCCCATGCTTCCCACACGGTCCAGGATCTCCGAGAAGGTCATaGCACTGGGGCAAGACGAGCCAGAGCTGGTGGCCGGGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: NGPCFPHGPGSPRRS*HWGKTSQSWWPGLD
Trigger: ATCCAGACCCGGCCACCAGCTCTGGCTCGTCTTGCCCCAGTGCCATGACCTTCTCGGAGATCCTGGACCGTGTGGGAAGCATGGGCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000544707.1
CDS CCA 90 bp GTGAAGTCCCTGGCACCCAACCTGGCAGCCTCTTCCAGAGGGTTCTaGGGTAGCCCCAGTCTCTCACCCAAGGGCACAAAGGTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: VKSLAPNLAASSRGF*GSPSLSPKGTKVRA
Trigger: GGCTCTCACCTTTGTGCCCTTGGGTGAGAGACTGGGGCTACCCCAGAACCCTCTGGAAGAGGCTGCCAGGTTGGGTGCCAGGGACTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS CCA 90 bp AGTCCTTGGTGCTGTTGTAGACCCAGCCATCCAGGCATGGCTCCATaGCCCTCTGGGTGTCATTGGGCAGGCTGGTGGCCGGGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: SPWCCCRPSHPGMAP*PSGCHWAGWWPGLD
Trigger: ATCCAGACCCGGCCACCAGCCTGCCCAATGACACCCAGAGGGCCATGGAGCCATGCCTGGATGGCTGGGTCTACAACAGCACCAAGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545207.5
CDS CCA 90 bp CACAATGGAGTCCTTGGTGCTGTTGTAGACCCAGCCATCCAGGCATaGCTCCATGGCCCTCTGGGTGTCATTGGGCAGGCTGGTGGCCGG +
Preference number: 5 (lower is better)
Translates to: HNGVLGAVVDPAIQA*LHGPLGVIGQAGGR
Trigger: CCGGCCACCAGCCTGCCCAATGACACCCAGAGGGCCATGGAGCCATGCCTGGATGGCTGGGTCTACAACAGCACCAAGGACTCCATTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545207.5
CDS-3UTR CAA 90 bp ATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCGGCCCTGTGGAGGCATaGTGGGGCGGGCGACAGTGG +
Preference number: 5 (lower is better)
Translates to: ILGGWTYMGPPYTPKVPGGPVEA*WGGRQW
Trigger: CCACTGTCGCCCGCCCCACAATGCCTCCACAGGGCC...GCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS TCA 90 bp CGCAGGGACCAGTTTTCCAGGTCTTCGATAGTCTCTGGCAAGGGCTaGTTCAGGGTCTCAGGCAGGAAGAGGGCAGCACTGCCCCCGAGG +
Preference number: 5 (lower is better)
Translates to: RRDQFSRSSIVSGKG*FRVSGRKRAALPPR
Trigger: CCTCGGGGGCAGTGCTGCCCTCTTCCTGCCTGAGACCCTGAATCAGCCCTTGCCAGAGACTATCGAAGACCTGGAAAACTGGTCCCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000545207.5
CDS GCA 90 bp CAGGCCGGGCAGAATGAACTGGCCAAAGGTGTAGCAGTACCCGAGTaGTGTCGACATGATGGCCCGCATCCGGGTAGGCACCCATTCCAC +
Preference number: 5 (lower is better)
Translates to: QAGQNELAKGVAVPE*CRHDGPHPGRHPFH
Trigger: GTGGAATGGGTGCCTACCCGGATGCGGGCCATCATGTCGACAGCACTCGGGTACTGCTACACCTTTGGCCAGTTCATTCTGCCCGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000539841.1
ENST00000542795.5
ENST00000542904.1
ENST00000545207.5
CDS-3UTR CAA 90 bp GGGGAAGGTGGCCAGTGGGGAAGGGCTAGACAGAAGAATGGCAGGGCCTGGGTTTTGTGGTTGGCCATGTaGAGGATCGGGAGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: GEGGQWGRARQKNGRAWVLWLAM*RIGRPS
Trigger: ACTGGGCCTCCCGATCCTCAACATGGCCAACCACAA...AACCCAGGCCCTGCCATTCTTCTGTCTAGCCCTTCCCCACTGGCCACCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS GCA 90 bp CCTCTGGGAGGCCTTTTCCACCTCTGGCTCCTGCTTTGGCTTCTTTaGCCGCAGGGACCTAGGGACAGAGAGCTAAGGAAAAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: PLGGLFHLWLLLWLL*PQGPRDRELRKSPG
Trigger: CCCAGGGCTTTTCCTTAGCTCTCTGTCCCTAGGTCCCTGCGGGCAAAGAAGCCAAAGCAGGAGCCAGAGGTGGAAAAGGCCTCCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311438.12
ENST00000451262.1
ENST00000539841.1
CDS CCA 90 bp CAGTGGTGGACAGGGGTGGCGGCTGTGAAGATCTGCAGCAGGTTGTaGTTGGCCATGTTGAGGATCGGGAGGCCCAGTATGGCTACATGC +
Preference number: 5 (lower is better)
Translates to: QWWTGVAAVKICSRL*LAMLRIGRPSMATC
Trigger: GCATGTAGCCATACTGGGCCTCCCGATCCTCAACATGGCCAACCACAACCTGCTGCAGATCTTCACAGCCGCCACCCCTGTCCACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS CCA 90 bp AGTCCTTGGTGCTGTTGTAGACCCAGCCATCCAGGCATGGCTCCATaGCCCTCTGGGTGTCATTGGGCAGGCTGGCATTGGGCGGATGTA +
Preference number: 5 (lower is better)
Translates to: SPWCCCRPSHPGMAP*PSGCHWAGWHWADV
Trigger: TACATCCGCCCAATGCCAGCCTGCCCAATGACACCCAGAGGGCCATGGAGCCATGCCTGGATGGCTGGGTCTACAACAGCACCAAGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS CCA 90 bp CACAATGGAGTCCTTGGTGCTGTTGTAGACCCAGCCATCCAGGCATaGCTCCATGGCCCTCTGGGTGTCATTGGGCAGGCTGGCATTGGG +
Preference number: 5 (lower is better)
Translates to: HNGVLGAVVDPAIQA*LHGPLGVIGQAGIG
Trigger: CCCAATGCCAGCCTGCCCAATGACACCCAGAGGGCCATGGAGCCATGCCTGGATGGCTGGGTCTACAACAGCACCAAGGACTCCATTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS CCA 90 bp GGGGTTACCAGGCCAGGGAAAGACAGAAGGTCATGCGGCGCAGCATaGGTATCCGGAACAGGTCACTTGCGGTGTACTTGGCCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: GVTRPGKDRRSCGAA*VSGTGHLRCTWPWP
Trigger: TGGCCAAGGCCAAGTACACCGCAAGTGACCTGTTCCGGATACCCATGCTGCGCCGCATGACCTTCTGTCTTTCCCTGGCCTGGTAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS-3UTR CAA 90 bp GAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGCCCTCTGGGTGTCATaGGGCAGGCTGGTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: EGFILGGWTYMGPPYTPKALWVS*GRLVAG
Trigger: CCCGGCCACCAGCCTGCCCAATGACACCCAGAGGGC...CTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545207.5
CDS TCA 90 bp GTGACTGACCAGTTTTCCAGGTCTTCGATAGTCTCTGGCAAGGGCTaGTTCAGGGTCTCAGGCAGGAAGAGGGCAGCACTGCCCCCGAGG +
Preference number: 5 (lower is better)
Translates to: VTDQFSRSSIVSGKG*FRVSGRKRAALPPR
Trigger: CCTCGGGGGCAGTGCTGCCCTCTTCCTGCCTGAGACCCTGAATCAGCCCTTGCCAGAGACTATCGAAGACCTGGAAAACTGGTCAGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311438.12
ENST00000451262.1
ENST00000539841.1
CDS GCA 90 bp TCGGGAGGCCCAGTATGGCTACATGCAGGAACTGGAAATGGCCCATaGTTCCCACACGGTCCAGGATCTCCGAGAAGGTCATGGCACTGG +
Preference number: 5 (lower is better)
Translates to: SGGPVWLHAGTGNGP*FPHGPGSPRRSWHW
Trigger: CCAGTGCCATGACCTTCTCGGAGATCCTGGACCGTGTGGGAAGCATGGGCCATTTCCAGTTCCTGCATGTAGCCATACTGGGCCTCCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS GCA 90 bp AGGTCACTTGCGGTGTACTTGGCCTTGGCCAAGGAGATCTCCTTCTaGAGGTTGAGTTTGAGCTCCTTCGGGCAGAGGAGGGGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: RSLAVYLALAKEISF*RLSLSSFGQRRGRG
Trigger: ACCCCTCCCCCTCCTCTGCCCGAAGGAGCTCAAACTCAACCTGCAGAAGGAGATCTCCTTGGCCAAGGCCAAGTACACCGCAAGTGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS-3UTR CAA 90 bp GCTCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTCTCAGGCTTCCCATTaGGGCCCATGGGGAGCACCC +
Preference number: 5 (lower is better)
Translates to: ALVVVMETPSPSSQKASSSQASH*GPWGAP
Trigger: GGGTGCTCCCCATGGGCCCAAATGGGAAGCCTGAGA...GGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CAA 90 bp GGGGAAGGTGGCCAGTGGGGAAGGGCTAGACAGAAGAATGGCAGGGCCTGGGTTTACGCCCATACCTGTTaGCCTGATGACTGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: GEGGQWGRARQKNGRAWVYAHTC*PDDCGV
Trigger: TACCCCACAGTCATCAGGCAAACAGGTATGGGCGTA...AACCCAGGCCCTGCCATTCTTCTGTCTAGCCCTTCCCCACTGGCCACCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CAA 90 bp GCTCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCGGGATGGCTGAACCTTaGAACTGGCCAGGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: ALVVVMETPSPSSQKASSGMAEP*NWPGLG
Trigger: GCCCAGCCCTGGCCAGTTCAAAGGTTCAGCCATCCC...GGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS GCA 90 bp AAACCGGTAGCAAACCTGAGAGGCAGAGAAGGATTGGTTAGCACCTaGAGCCAGGCAGAGGCCACTCCCCATGCTGGTCATTGGGTCACC +
Preference number: 5 (lower is better)
Translates to: KPVANLRGREGLVST*SQAEATPHAGHWVT
Trigger: GGTGACCCAATGACCAGCATGGGGAGTGGCCTCTGCCTGGCTGCAGGTGCTAACCAATCCTTCTCTGCCTCTCAGGTTTGCTACCGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS GCA 90 bp ATGCTTCCCACGCGGGTCCACAGGTTACTTACGCCCATACCTGTTTaGCTGCGAGGGTTCAGAGTAGGGATTGGTAGCCTGTGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: MLPTRVHRLLTPIPV*LRGFRVGIGSLCVG
Trigger: CCCCACACACAGGCTACCAATCCCTACTCTGAACCCTCGCAGGCAAACAGGTATGGGCGTAAGTAACCTGTGGACCCGCGTGGGAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 90 bp GAGAGGGTTTGCCCAGGCATACCTCTGTCACAATGGAGTCCTTGGTaGTGTTGTAGACCCAGCCATCCAGGCATGGCTCCATGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: ERVCPGIPLSQWSPW*CCRPSHPGMAPWPS
Trigger: AGAGGGCCATGGAGCCATGCCTGGATGGCTGGGTCTACAACAGCACCAAGGACTCCATTGTGACAGAGGTATGCCTGGGCAAACCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544707.1
CDS CCA 90 bp GCCATGTTGAGGATCGGGAGGCCCAGTATGGCTACATGCAGGAACTaGAAATGGCCCATGCTTCCCACACGGTCCAGGATCTCCGAGAAG +
Preference number: 5 (lower is better)
Translates to: AMLRIGRPSMATCRN*KWPMLPTRSRISEK
Trigger: CTTCTCGGAGATCCTGGACCGTGTGGGAAGCATGGGCCATTTCCAGTTCCTGCATGTAGCCATACTGGGCCTCCCGATCCTCAACATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS CCA 90 bp TACCTGTGGTGCCTGTACACAGGCCTGTCGTACATGAAGTGTGGATaGACAGATGTGCATGCTCACGTGTCCACACGGTGGCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: YLWCLYTGLSYMKCG*TDVHAHVSTRWPAP
Trigger: GGGAGCTGGCCACCGTGTGGACACGTGAGCATGCACATCTGTCCATCCACACTTCATGTACGACAGGCCTGTGTACAGGCACCACAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS-3UTR CAA 90 bp GGGGAAGGTGGCCAGTGGGGAAGGGCTAGACAGAAGAATGGCAGGGCCTGGGTTGCCATCTCCTTCAGTTaGTTGGAGTTGCACACCAAG +
Preference number: 5 (lower is better)
Translates to: GEGGQWGRARQKNGRAWVAISFS*LELHTK
Trigger: CTTGGTGTGCAACTCCAACAAACTGAAGGAGATGGC...AACCCAGGCCCTGCCATTCTTCTGTCTAGCCCTTCCCCACTGGCCACCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS GCA 90 bp TGGAGTTGCACACCAAGTCCCACTCTGTCACAATGGAGTCCTTGGTaGTGTTGTAGACCCAGCCATCCAGGCATGGCTCCATGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: WSCTPSPTLSQWSPW*CCRPSHPGMAPWPS
Trigger: AGAGGGCCATGGAGCCATGCCTGGATGGCTGGGTCTACAACAGCACCAAGGACTCCATTGTGACAGAGTGGGACTTGGTGTGCAACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000545207.5
CDS GCA 90 bp ACAGAAGGTCATGCGGCGCAGCATGGGTATCCGGAACAGGTCACTTaGGGTGTACTTGGCCTTGGCCAAGGAGATCTCCTTCTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: TEGHAAQHGYPEQVT*GVLGLGQGDLLLQV
Trigger: AACCTGCAGAAGGAGATCTCCTTGGCCAAGGCCAAGTACACCGCAAGTGACCTGTTCCGGATACCCATGCTGCGCCGCATGACCTTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000539841.1
ENST00000545207.5
CDS GCA 90 bp GGTGCCATTAATGACCAGCTAGTGGGCAGGACGAAGAGAGGGAGATaGAGGCGTGGTGCCTCTAGAGGAGCTCAGGGAATCAGATGTGGT +
Preference number: 5 (lower is better)
Translates to: GAINDQLVGRTKRGR*RRGASRGAQGIRCG
Trigger: ACCACATCTGATTCCCTGAGCTCCTCTAGAGGCACCACGCCTGCATCTCCCTCTCTTCGTCCTGCCCACTAGCTGGTCATTAATGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 90 bp TTGAGGATCGGGAGGCCCAGTATGGCTACATGCAGGAACTGGAAATaGCCCATGCTTCCCACACGGTCCAGGATCTCCGAGAAGGTCATG +
Preference number: 5 (lower is better)
Translates to: LRIGRPSMATCRNWK*PMLPTRSRISEKVM
Trigger: CATGACCTTCTCGGAGATCCTGGACCGTGTGGGAAGCATGGGCCATTTCCAGTTCCTGCATGTAGCCATACTGGGCCTCCCGATCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS CCA 90 bp CTTCTTTGCCCGCAGGGACCAGTTTTCCAGGTCTTCGATAGTCTCTaGCAAGGGCTGATTCAGGGTCTCAGGCAGGAAGAGGGCAGCACT +
Preference number: 5 (lower is better)
Translates to: LLCPQGPVFQVFDSL*QGLIQGLRQEEGST
Trigger: AGTGCTGCCCTCTTCCTGCCTGAGACCCTGAATCAGCCCTTGCCAGAGACTATCGAAGACCTGGAAAACTGGTCCCTGCGGGCAAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000545207.5
CDS CCA 90 bp CATGTACCTGTGGTGCCTGTACACAGGCCTGTCGTACATGAAGTGTaGATGGACAGATGTGCATGCTCACGTGTCCACACGGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: HVPVVPVHRPVVHEV*MDRCACSRVHTVAS
Trigger: GCTGGCCACCGTGTGGACACGTGAGCATGCACATCTGTCCATCCACACTTCATGTACGACAGGCCTGTGTACAGGCACCACAGGTACATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS-3UTR CAA 90 bp GAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGCCTCTGGCTCCTGCTTaGGCTTCTTTGCCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: EGFILGGWTYMGPPYTPKPLAPA*ASLPAG
Trigger: CCCTGCGGGCAAAGAAGCCAAAGCAGGAGCCAGAGG...CTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp GAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGGAAAGGGGGTTCCGTaGTCCTCAGCTGGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: EGFILGGWTYMGPPYTPKGKGVP*SSAGAQ
Trigger: CTGGGCTCCAGCTGAGGACAACGGAACCCCCTTTCC...CTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp AAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATGGAAAGGGGGTTCCGTaGTCCTCAGCTGGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: KLSEGFILGGWTYMGPPYGKGVP*SSAGAQ
Trigger: CTGGGCTCCAGCTGAGGACAACGGAACCCCCTTTCC...ATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp TTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTATGGCAGGGCCTGGGTaGCAGGGAGAACAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: FILGGWTYMGPPYTPKVPMAGPG*QGEQGQ
Trigger: CTGCCCTTGTTCTCCCTGCAACCCAGGCCCTGCCAT...AGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CAA 90 bp GATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCAGTTGCAGCAGGTTGTGGTaGGCCATGTTGAGGATCGGG +
Preference number: 5 (lower is better)
Translates to: DGPIWGLPILLRCLARISCSRLW*AMLRIG
Trigger: CCCGATCCTCAACATGGCCAACCACAACCTGCTGCA...ACTGATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336232.7
CDS-3UTR CAA 90 bp GATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCAGTGCGGTGTACTTGGCCTaGGCCAAGGAGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: DGPIWGLPILLRCLARISAVYLA*AKEISF
Trigger: GAAGGAGATCTCCTTGGCCAAGGCCAAGTACACCGC...ACTGATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp CTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCGCGGTGTACTTGGCCTaGGCCAAGGAGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LRRLHPRRMDLYGASLYSAVYLA*AKEISF
Trigger: GAAGGAGATCTCCTTGGCCAAGGCCAAGTACACCGC...GGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp GCTCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTCACTTGCGGTGTACTaGGCCTTGGCCAAGGAGATC +
Preference number: 5 (lower is better)
Translates to: ALVVVMETPSPSSQKASSSLAVY*ALAKEI
Trigger: GATCTCCTTGGCCAAGGCCAAGTACACCGCAAGTGA...GGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp GGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAGGATCCGGAACAGGTCACTaGCGGTGTACTTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: GGGDGDTFTKLSEGFILGSGTGH*RCTWPW
Trigger: CCAAGGCCAAGTACACCGCAAGTGACCTGTTCCGGA...TCCTAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS TCA 90 bp CAGCTTGCATGTACCTGTGGTGCCTGTACACAGGCCTGTCGTACATaGAGTGTGGATGGACAGATGTGCATGCTCACGTGTCCACACGGT +
Preference number: 5 (lower is better)
Translates to: QLACTCGACTQACRT*SVDGQMCMLTCPHG
Trigger: ACCGTGTGGACACGTGAGCATGCACATCTGTCCATCCACACTTCATGTACGACAGGCCTGTGTACAGGCACCACAGGTACATGCAAGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS TCA 90 bp TATGAGGCTAGAAGGTGGATACAGGGGAGGCAGACAGCTCCTTTATaGAGTCTGGCTTCGAAGGGGAGAAAGAGCCAGTGTGGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: YEARRWIQGRQTAPL*SLASKGRKSQCGPW
Trigger: CCAAGGGCCACACTGGCTCTTTCTCCCCTTCGAAGCCAGACTTCATAAAGGAGCTGTCTGCCTCCCCTGTATCCACCTTCTAGCCTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 90 bp TCCCTTCCCAAACACAGCCAATACTGTCCTCACGGTCTGCAAGTCTaGAGAGGGAAGAAAATGTGGTGGGCCTTGGAGTTCAGGAGCACC +
Preference number: 5 (lower is better)
Translates to: SLPKHSQYCPHGLQV*RGKKMWWALEFRST
Trigger: GGTGCTCCTGAACTCCAAGGCCCACCACATTTTCTTCCCTCTGCAGACTTGCAGACCGTGAGGACAGTATTGGCTGTGTTTGGGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS GCA 90 bp GTGACCTATGAGTTGACGCAGCATGAGGACTCTGCCCAAAAGTGGTaGTCCATATTGGATCTCCATGTACCGAGCCAGGTGGAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: VTYELTQHEDSAQKW*SILDLHVPSQVESL
Trigger: CAGGGACTCCACCTGGCTCGGTACATGGAGATCCAATATGGAGCACCACTTTTGGGCAGAGTCCTCATGCTGCGTCAACTCATAGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 90 bp ACTCTGGTGTCCACCAGGATGATAGGAAGAAGACGAAGAAGGGAATaGACACAGTTAACTGCAGCCAACGCCACTGGGGGATGGCGTAGG +
Preference number: 5 (lower is better)
Translates to: TLVSTRMIGRRRRRE*TQLTAANATGGWRR
Trigger: CCTACGCCATCCCCCAGTGGCGTTGGCTGCAGTTAACTGTGTCCATTCCCTTCTTCGTCTTCTTCCTATCATCCTGGTGGACACCAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000539841.1
ENST00000542795.5
ENST00000542904.1
ENST00000545207.5
CDS CCA 90 bp CTAGAAGGTGGATACAGGGGAGGCAGACAGCTCCTTTATGAAGTCTaGCTTCGAAGGGGAGAAAGAGCCAGTGTGGCCCTTGGAAGGAGA +
Preference number: 5 (lower is better)
Translates to: LEGGYRGGRQLLYEV*LRRGERASVALGRR
Trigger: TCTCCTTCCAAGGGCCACACTGGCTCTTTCTCCCCTTCGAAGCCAGACTTCATAAAGGAGCTGTCTGCCTCCCCTGTATCCACCTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS-3UTR CAA 90 bp GGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGTCACTTGCGGTGTACTaGGCCTTGGCCAAGGAGATC +
Preference number: 5 (lower is better)
Translates to: GFILGGWTYMGPPYTPKVSLAVY*ALAKEI
Trigger: GATCTCCTTGGCCAAGGCCAAGTACACCGCAAGTGA...CACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp GAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGTCCGGAACAGGTCACTaGCGGTGTACTTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: EGFILGGWTYMGPPYTPKSGTGH*RCTWPW
Trigger: CCAAGGCCAAGTACACCGCAAGTGACCTGTTCCGGA...CTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp CAAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTAAGGATGGTGATGAACTaGGCTGGGACATCGACCCCA +
Preference number: 5 (lower is better)
Translates to: QALRRLHPRRMDLYGASLRMVMN*AGTSTP
Trigger: TGGGGTCGATGTCCCAGCCAAGTTCATCACCATCCT...TAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp GGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAGGACCTGCTTTGGCTTCTTaGCCCGCAGGGACCAGTTTT +
Preference number: 5 (lower is better)
Translates to: GGGDGDTFTKLSEGFILGPALAS*PAGTSF
Trigger: AAAACTGGTCCCTGCGGGCAAAGAAGCCAAAGCAGG...TCCTAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS TCA 90 bp AGGCACCCATTCCACATTCAAGATGACGGTGCTCAGGGTAATGCCTaGGATGCCAAAGCCACACAGGAAGCGGAAGACCATGTAGATGGG +
Preference number: 5 (lower is better)
Translates to: RHPFHIQDDGAQGNA*DAKATQEAEDHVDG
Trigger: CCCATCTACATGGTCTTCCGCTTCCTGTGTGGCTTTGGCATCTCAGGCATTACCCTGAGCACCGTCATCTTGAATGTGGAATGGGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000542795.5
ENST00000542904.1
ENST00000545207.5
CDS TCA 90 bp GATCTCTCCTGGTTGGGCAGCAGTTTAACATCCAGACTGGCGAGGTaGGCATTGAGCTGTATGCCTGGGTCAGATGTTTCCCTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: DLSWLGSSLTSRLAR*ALSCMPGSDVSLPL
Trigger: GAGAGGAAGGGAAACATCTGACCCAGGCATACAGCTCAATGCTCACCTCGCCAGTCTGGATGTTAAACTGCTGCCCAACCAGGAGAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS GCA 90 bp CATGCACAGGCGTGGTGTACACACCTCAGAGCACTCACATGTGCTTaGTCATGTTCACATCAGTCCAGCTTGCATGTACCTGTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: HAQAWCTHLRALTCA*SCSHQSSLHVPVVP
Trigger: AGGCACCACAGGTACATGCAAGCTGGACTGATGTGAACATGAGCAAGCACATGTGAGTGCTCTGAGGTGTGTACACCACGCCTGTGCATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 90 bp CCTTCTCCCTCCAGGTCGAGACCCAGTCAAACTAAGGGGAAGCATTaGTGGCTCTGTTGTCAGCTGATCCTAGGCTCCACAGTAGAAACT +
Preference number: 5 (lower is better)
Translates to: PSPSRSRPSQTKGKH*WLCCQLILGSTVET
Trigger: AGTTTCTACTGTGGAGCCTAGGATCAGCTGACAACAGAGCCAGCAATGCTTCCCCTTAGTTTGACTGGGTCTCGACCTGGAGGGAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS-3UTR CAA 90 bp GGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAGGATTCTGCAGGTTGAGTTaGAGCTCCTCCAAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: GGGDGDTFTKLSEGFILGFCRLS*SSSKLS
Trigger: GCTCAGCTTGGAGGAGCTCAAACTCAACCTGCAGAA...TCCTAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp GGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGTTCTGCAGGTTGAGTTaGAGCTCCTCCAAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: GFILGGWTYMGPPYTPKVFCRLS*SSSKLS
Trigger: GCTCAGCTTGGAGGAGCTCAAACTCAACCTGCAGAA...CACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp AAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATAGGATGGTGATGAACTaGGCTGGGACATCGACCCCA +
Preference number: 5 (lower is better)
Translates to: KLSEGFILGGWTYMGPPYRMVMN*AGTSTP
Trigger: TGGGGTCGATGTCCCAGCCAAGTTCATCACCATCCT...ATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp TTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTCCTGCTTTGGCTTCTTaGCCCGCAGGGACCAGTTTT +
Preference number: 5 (lower is better)
Translates to: FILGGWTYMGPPYTPKVPPALAS*PAGTSF
Trigger: AAAACTGGTCCCTGCGGGCAAAGAAGCCAAAGCAGG...AGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS TCA 90 bp AGATCAGGACTGGAGGGAATCTCGGAGACCAAAGGAGGCAGTAAATaGTCTCTCCTGGTTGGGCAGCAGTTTAACATCCAGACTGGCGAG +
Preference number: 5 (lower is better)
Translates to: RSGLEGISETKGGSK*SLLVGQQFNIQTGE
Trigger: CTCGCCAGTCTGGATGTTAAACTGCTGCCCAACCAGGAGAGATCATTTACTGCCTCCTTTGGTCTCCGAGATTCCCTCCAGTCCTGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS TCA 90 bp GGGTCCAGCAGATTCCAAGTGTCTGCCAGGCCCCTCGCAACATTCTaGGTAAGGAATTCTGAGATACACTGTGAGCTTTGTGCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: GSSRFQVSARPLATF*VRNSEIHCELCALW
Trigger: CCACAAGGCACAAAGCTCACAGTGTATCTCAGAATTCCTTACTCAGAATGTTGCGAGGGGCCTGGCAGACACTTGGAATCTGCTGGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 90 bp GATAGGCATCCCTTCCCAAACACAGCCAATACTGTCCTCACGGTCTaGAAGTCTGCAGAGGGAAGAAAATGTGGTGGGCCTTGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: DRHPFPNTANTVLTV*KSAEGRKCGGPWSS
Trigger: TGAACTCCAAGGCCCACCACATTTTCTTCCCTCTGCAGACTTGCAGACCGTGAGGACAGTATTGGCTGTGTTTGGGAAGGGATGCCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS CCA 90 bp CCAAGCACGAGCCCTCCAATCAGTATACCTGCCATGAAGATAGACTaGGCCATCTCCTTCAGTTTGTTGGAGTTGCACACCAAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: PSTSPPISIPAMKID*AISFSLLELHTKSH
Trigger: GTGGGACTTGGTGTGCAACTCCAACAAACTGAAGGAGATGGCCCAGTCTATCTTCATGGCAGGTATACTGATTGGAGGGCTCGTGCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000542795.5
ENST00000542904.1
ENST00000545207.5
CDS CCA 90 bp TTTGGATCTGGAGTGCCCTGTGGTCTAGTTGGTCACCACCAGAGATaGCAGATTATGGAACTGTTCAGTTGGCAGATTCCGGGGATGCAG +
Preference number: 5 (lower is better)
Translates to: FGSGVPCGLVGHHQR*QIMELFSWQIPGMQ
Trigger: CTGCATCCCCGGAATCTGCCAACTGAACAGTTCCATAATCTGCCATCTCTGGTGGTGACCAACTAGACCACAGGGCACTCCAGATCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 90 bp GCATCCAACATGATCATAAATGGCCAGTCCCAGCAGCTTCCCACATaGCTGGATGACAGATGGGCTAGGATGGGAGAACCTTCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: ASNMIINGQSQQLPT*LDDRWARMGEPSSL
Trigger: AAGGGAAGAAGGTTCTCCCATCCTAGCCCATCTGTCATCCAGCCATGTGGGAAGCTGCTGGGACTGGCCATTTATGATCATGTTGGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 90 bp TCTCCCTCCAGGTCGAGACCCAGTCAAACTAAGGGGAAGCATTGCTaGCTCTGTTGTCAGCTGATCCTAGGCTCCACAGTAGAAACTCTA +
Preference number: 5 (lower is better)
Translates to: SPSRSRPSQTKGKHC*LCCQLILGSTVETL
Trigger: TAGAGTTTCTACTGTGGAGCCTAGGATCAGCTGACAACAGAGCCAGCAATGCTTCCCCTTAGTTTGACTGGGTCTCGACCTGGAGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS-3UTR CAA 90 bp GATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTGGCTAGGATCAGTGCCATCTCCTTCAGTTaGTTGGAGTTGCACACCAAG +
Preference number: 5 (lower is better)
Translates to: DGPIWGLPILLRCLARISAISFS*LELHTK
Trigger: CTTGGTGTGCAACTCCAACAAACTGAAGGAGATGGC...ACTGATCCTAGCCAGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp CAAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTAATCTCCTTCTGCAGGTaGAGTTTGAGCTCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: QALRRLHPRRMDLYGASLISFCR*SLSSSK
Trigger: CTTGGAGGAGCTCAAACTCAACCTGCAGAAGGAGAT...TAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp GAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGTACGCCCATACCTGTTaGCCTGATGACTGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: EGFILGGWTYMGPPYTPKYAHTC*PDDCGV
Trigger: TACCCCACAGTCATCAGGCAAACAGGTATGGGCGTA...CTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS TCA 90 bp TTTCAGAGGAATCCATCCAAGCTAGGCCTTAAGGATGAGTTGGCATaGGCCAAGTGCTGTAGAGTTGGATGGGGAGAAGCCAAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: FQRNPSKLGLKDELA*AKCCRVGWGEAKCW
Trigger: CCAGCACTTGGCTTCTCCCCATCCAACTCTACAGCACTTGGCTCATGCCAACTCATCCTTAAGGCCTAGCTTGGATGGATTCCTCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 90 bp CCTGTCAGACAGGTCTCCAAGCACGAGCCCTCCAATCAGTATACCTaGCATGAAGATAGACTGGGCCATCTCCTTCAGTTTGTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: PVRQVSKHEPSNQYT*HEDRLGHLLQFVGV
Trigger: AACTCCAACAAACTGAAGGAGATGGCCCAGTCTATCTTCATGGCAGGTATACTGATTGGAGGGCTCGTGCTTGGAGACCTGTCTGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000542795.5
ENST00000542904.1
ENST00000545207.5
CDS GCA 90 bp GTGCTTGCTCATGTTCACATCAGTCCAGCTTGCATGTACCTGTGGTaGCTGTACACAGGCCTGTCGTACATGAAGTGTGGATGGACAGAT +
Preference number: 5 (lower is better)
Translates to: VLAHVHISPACMYLW*LYTGLSYMKCGWTD
Trigger: ATCTGTCCATCCACACTTCATGTACGACAGGCCTGTGTACAGGCACCACAGGTACATGCAAGCTGGACTGATGTGAACATGAGCAAGCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 90 bp TCAGAGCACTCACATGTGCTTGCTCATGTTCACATCAGTCCAGCTTaGATGTACCTGTGGTGCCTGTACACAGGCCTGTCGTACATGAAG +
Preference number: 5 (lower is better)
Translates to: SEHSHVLAHVHISPA*MYLWCLYTGLSYMK
Trigger: CTTCATGTACGACAGGCCTGTGTACAGGCACCACAGGTACATGCAAGCTGGACTGATGTGAACATGAGCAAGCACATGTGAGTGCTCTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 90 bp CATGTGCTTGCTCATGTTCACATCAGTCCAGCTTGCATGTACCTGTaGTGCCTGTACACAGGCCTGTCGTACATGAAGTGTGGATGGACA +
Preference number: 5 (lower is better)
Translates to: HVLAHVHISPACMYL*CLYTGLSYMKCGWT
Trigger: TGTCCATCCACACTTCATGTACGACAGGCCTGTGTACAGGCACCACAGGTACATGCAAGCTGGACTGATGTGAACATGAGCAAGCACATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 90 bp TTACTTAGATCACATGTCCTAAGCATGGGTTTGAAACGATTGACTTaGGGAGGGTCCAGCAGATTCCAAGTGTCTGCCAGGCCCCTCGCA +
Preference number: 5 (lower is better)
Translates to: LLRSHVLSMGLKRLT*GGSSRFQVSARPLA
Trigger: TGCGAGGGGCCTGGCAGACACTTGGAATCTGCTGGACCCTCCCCAAGTCAATCGTTTCAAACCCATGCTTAGGACATGTGATCTAAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS-3UTR CAA 90 bp GAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGATCTCCTTCTGCAGGTaGAGTTTGAGCTCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: EGFILGGWTYMGPPYTPKISFCR*SLSSSK
Trigger: CTTGGAGGAGCTCAAACTCAACCTGCAGAAGGAGAT...CTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp CTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTGGGGTATAATTCACTaGTGTAGAGGAAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: LRRLHPRRMDLYGASLYSWGIIH*CRGRGS
Trigger: GCTGCCTCTTCCTCTACACAAGTGAATTATACCCCA...GGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS GCA 90 bp CTTCTGTCTGCAGCCACTCTGGGCTTGGTCAGTCATCTGCTCATATaGATGCTGGGACGTGTAGACACACACATGTATTTTCATGCACAG +
Preference number: 5 (lower is better)
Translates to: LLSAATLGLVSHLLI*MLGRVDTHMYFHAQ
Trigger: CTGTGCATGAAAATACATGTGTGTGTCTACACGTCCCAGCATGCATATGAGCAGATGACTGACCAAGCCCAGAGTGGCTGCAGACAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 90 bp GCAGCAATGGAGAGAAGGAGGAATCCAGAATGGGGATTTGGGGATTaGAAGAAGAACGGGTCTTGTGAGTGGCCAGTTTGTCCTGAACAA +
Preference number: 5 (lower is better)
Translates to: AAMERRRNPEWGFGD*KKNGSCEWPVCPEQ
Trigger: TTGTTCAGGACAAACTGGCCACTCACAAGACCCGTTCTTCTTGCAATCCCCAAATCCCCATTCTGGATTCCTCCTTCTCTCCATTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 90 bp GTGGTGGCAAAGGTGCCAATAACTGACTCTAGAGAAGATCAGGACTaGAGGGAATCTCGGAGACCAAAGGAGGCAGTAAATGATCTCTCC +
Preference number: 5 (lower is better)
Translates to: VVAKVPITDSREDQD*RESRRPKEAVNDLS
Trigger: GGAGAGATCATTTACTGCCTCCTTTGGTCTCCGAGATTCCCTCCAGTCCTGATCTTCTCTAGAGTCAGTTATTGGCACCTTTGCCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS CCA 90 bp AGCTCCTTTATGAAGTCTGGCTTCGAAGGGGAGAAAGAGCCAGTGTaGCCCTTGGAAGGAGATACAACATCCTGGCATGTGTTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: SSFMKSGFEGEKEPV*PLEGDTTSWHVFVL
Trigger: CAACACAAACACATGCCAGGATGTTGTATCTCCTTCCAAGGGCCACACTGGCTCTTTCTCCCCTTCGAAGCCAGACTTCATAAAGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS-3UTR CAA 90 bp AAGCTCTCAGAAGGCTTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATTTCAGTTTGTTGGAGTaGCACACCAAGTCCCACTCT +
Preference number: 5 (lower is better)
Translates to: KLSEGFILGGWTYMGPPYFSLLE*HTKSHS
Trigger: AGAGTGGGACTTGGTGTGCAACTCCAACAAACTGAA...ATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAAGCCTTCTGAGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp TCTGGTGGTGGTGATGGAGACACCTTCACCAAGCTCTCAGAAGGCTTCATCCTAATCTCCTTCAGTTTGTaGGAGTTGCACACCAAGTCC +
Preference number: 5 (lower is better)
Translates to: SGGGDGDTFTKLSEGFILISFSL*ELHTKS
Trigger: GGACTTGGTGTGCAACTCCAACAAACTGAAGGAGAT...TAGGATGAAGCCTTCTGAGAGCTTGGTGAAGGTGTCTCCATCACCACCACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp TTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTATCTCCTTCAGTTTGTaGGAGTTGCACACCAAGTCC +
Preference number: 5 (lower is better)
Translates to: FILGGWTYMGPPYTPKVPISFSL*ELHTKS
Trigger: GGACTTGGTGTGCAACTCCAACAAACTGAAGGAGAT...AGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS-3UTR CAA 90 bp TTCATCCTAGGAGGATGGACCTATATGGGGCCTCCCTATACTCCTAAGGTGCCTTGGGGTATAATTCACTaGTGTAGAGGAAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: FILGGWTYMGPPYTPKVPWGIIH*CRGRGS
Trigger: GCTGCCTCTTCCTCTACACAAGTGAATTATACCCCA...AGGCACCTTAGGAGTATAGGGAGGCCCCATATAGGTCCATCCTCCTAGGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000545207.5
CDS CCA 90 bp ATGCTGGGACGTGTAGACACACACATGTATTTTCATGCACAGGCGTaGTGTACACACCTCAGAGCACTCACATGTGCTTGCTCATGTTCA +
Preference number: 5 (lower is better)
Translates to: MLGRVDTHMYFHAQA*CTHLRALTCACSCS
Trigger: TGAACATGAGCAAGCACATGTGAGTGCTCTGAGGTGTGTACACCACGCCTGTGCATGAAAATACATGTGTGTGTCTACACGTCCCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS TCA 90 bp TTACAGGAAGAGTTCCTAGGAAAGATTCCTGGGGCAAATCAGTGTTaGAGAGATGGTAGAGCGAGAGGAGCTGCTTTTGGAGCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: LQEEFLGKIPGANQC*RDGRARGAAFGALW
Trigger: CCAAAGAGCTCCAAAAGCAGCTCCTCTCGCTCTACCATCTCTTCAACACTGATTTGCCCCAGGAATCTTTCCTAGGAACTCTTCCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS TCA 90 bp CTCTCTCTGAACTGTGGGATCCCTTTGAAGGGTTCCTGGACAAATTaGATCCTATTCACAAAGAAATGGCCAGGATGGGAAGCAGAAACC +
Preference number: 5 (lower is better)
Translates to: LSLNCGIPLKGSWTN*ILFTKKWPGWEAET
Trigger: GGTTTCTGCTTCCCATCCTGGCCATTTCTTTGTGAATAGGATTCAATTTGTCCAGGAACCCTTCAAAGGGATCCCACAGTTCAGAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS TCA 90 bp AGTGGCCAGTTTGTCCTGAACAACATCTCAGTTCACCATAAGTCCTaGCCATGTACCTGGAAAGTATTTTCTTGGGTGTCTTCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: SGQFVLNNISVHHKS*PCTWKVFSWVSSLP
Trigger: GGGAAGGGAAGACACCCAAGAAAATACTTTCCAGGTACATGGTCAGGACTTATGGTGAACTGAGATGTTGTTCAGGACAAACTGGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 90 bp TATGTGATAAATGAGATTTGGATCTGGAGTGCCCTGTGGTCTAGTTaGTCACCACCAGAGATGGCAGATTATGGAACTGTTCAGTTGGCA +
Preference number: 5 (lower is better)
Translates to: YVINEIWIWSALWSS*SPPEMADYGTVQLA
Trigger: TGCCAACTGAACAGTTCCATAATCTGCCATCTCTGGTGGTGACCAACTAGACCACAGGGCACTCCAGATCCAAATCTCATTTATCACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 90 bp AGGAGAGAGTATGTGATAAATGAGATTTGGATCTGGAGTGCCCTGTaGTCTAGTTGGTCACCACCAGAGATGGCAGATTATGGAACTGTT +
Preference number: 5 (lower is better)
Translates to: RREYVINEIWIWSAL*SSWSPPEMADYGTV
Trigger: AACAGTTCCATAATCTGCCATCTCTGGTGGTGACCAACTAGACCACAGGGCACTCCAGATCCAAATCTCATTTATCACATACTCTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS TCA 90 bp GTGAAAGACTTTAGATTTTATCCCAGTGGGAAGTCACCAGAAGGTTaGCGCAGGGGTACAATACCATCCCTTTCACATTTATTAAGCTGT +
Preference number: 5 (lower is better)
Translates to: VKDFRFYPSGKSPEG*RRGTIPSLSHLLSC
Trigger: ACAGCTTAATAAATGTGAAAGGGATGGTATTGTACCCCTGCGTCAACCTTCTGGTGACTTCCCACTGGGATAAAATCTAAAGTCTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 90 bp ACTATCCAGATACCACCATACTTTTTGCCCAGTCCAAGTCAGATCTaGAAAGGAGCTTTCATGTCATCTAGCCCAATTGCGTTATTTTCT +
Preference number: 5 (lower is better)
Translates to: TIQIPPYFLPSPSQI*KGAFMSSSPIALFS
Trigger: AGAAAATAACGCAATTGGGCTAGATGACATGAAAGCTCCTTTCCAGATCTGACTTGGACTGGGCAAAAAGTATGGTGGTATCTGGATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS CCA 72 bp CCCATGGGGAGCACCCAAGGCCCTGTGGAGGCATTGTaGGGCGGGCGACAGTGGTGGACAGGGGTGGCGGCT +
Preference number: 6 (lower is better)
Translates to: PMGSTQGPVEAL*GGRQWWTGVAA
Trigger: AGCCGCCACCCCTGTCCACCACTGTCGCCCGCCCCACAATGCCTCCACAGGGCCTTGGGTGCTCCCCATGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS GCA 72 bp CTGCACCGGAGCCGCTGGCTGCCAGCAGCAGGTAGCTaGAGGTCAGGATGGGCCTGCGGCCAAACCTGTCAG +
Preference number: 6 (lower is better)
Translates to: LHRSRWLPAAGS*RSGWACGQTCQ
Trigger: CTGACAGGTTTGGCCGCAGGCCCATCCTGACCTGCAGCTACCTGCTGCTGGCAGCCAGCGGCTCCGGTGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000542795.5
ENST00000542904.1
ENST00000545207.5
CDS CCA 72 bp GGCCCTGTGGAGGCATTGTGGGGCGGGCGACAGTGGTaGACAGGGGTGGCGGCTGTGAAGATCTGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: GPVEALWGGRQW*TGVAAVKICSR
Trigger: CCTGCTGCAGATCTTCACAGCCGCCACCCCTGTCCACCACTGTCGCCCGCCCCACAATGCCTCCACAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS CCA 72 bp TCCCATTTGGGCCCATGGGGAGCACCCAAGGCCCTGTaGAGGCATTGTGGGGCGGGCGACAGTGGTGGACAG +
Preference number: 6 (lower is better)
Translates to: SHLGPWGAPKAL*RHCGAGDSGGQ
Trigger: CTGTCCACCACTGTCGCCCGCCCCACAATGCCTCCACAGGGCCTTGGGTGCTCCCCATGGGCCCAAATGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS CCA 72 bp CCACACGGTCCAGGATCTCCGAGAAGGTCATGGCACTaGGGCAAGACGAGCCAGAGCTGGTGGCCGGGTCTG +
Preference number: 6 (lower is better)
Translates to: PHGPGSPRRSWH*GKTSQSWWPGL
Trigger: CAGACCCGGCCACCAGCTCTGGCTCGTCTTGCCCCAGTGCCATGACCTTCTCGGAGATCCTGGACCGTGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000544707.1
CDS CCA 72 bp TGGAGGGCAGGGAAAGGGGGTTCCGTTGTCCTCAGCTaGAGCCCAGGCCTGGTCCGTGAGGCTGTAGAGGGA +
Preference number: 6 (lower is better)
Translates to: WRAGKGGSVVLS*SPGLVREAVEG
Trigger: TCCCTCTACAGCCTCACGGACCAGGCCTGGGCTCCAGCTGAGGACAACGGAACCCCCTTTCCCTGCCCTCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336232.7
ENST00000451262.1
ENST00000539841.1
ENST00000545207.5
CDS TCA 72 bp GGGTCTGGATCCGATGGGGCTGGTGATCAGTGTAGTTaGGGTCCCTGCTCTGTCCTAGGGGCCGGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: GSGSDGAGDQCS*GPCSVLGAGSC
Trigger: GCAGCTGCCGGCCCCTAGGACAGAGCAGGGACCTCAACTACACTGATCACCAGCCCCATCGGATCCAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000544707.1
ENST00000545207.5
CDS GCA 72 bp GAAGACCATGTAGATGGGGAAGGTGGGGCTGAAGGCTaGACCGGAGCCGCTGGCTGCCAGCAGCAGGTAGCT +
Preference number: 6 (lower is better)
Translates to: EDHVDGEGGAEG*TGAAGCQQQVA
Trigger: AGCTACCTGCTGCTGGCAGCCAGCGGCTCCGGTGCAGCCTTCAGCCCCACCTTCCCCATCTACATGGTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000542795.5
ENST00000542904.1
ENST00000545207.5
CDS CCA 72 bp TGCTTCCCACACGGTCCAGGATCTCCGAGAAGGTCATaGCACTGGGGCAAGACGAGCCAGAGCTGGTGGCCG +
Preference number: 6 (lower is better)
Translates to: CFPHGPGSPRRS*HWGKTSQSWWP
Trigger: CGGCCACCAGCTCTGGCTCGTCTTGCCCCAGTGCCATGACCTTCTCGGAGATCCTGGACCGTGTGGGAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336232.7
ENST00000544707.1
CDS CCA 72 bp CAGAGGGAAGCAGACCCTGATGGCTGGACCTGGGTGTaGGGCAGGAATGCAGCAGATTTCTGGGGTTGGGGC +
Preference number: 6 (lower is better)
Translates to: QREADPDGWTWV*GRNAADFWGWG
Trigger: GCCCCAACCCCAGAAATCTGCTGCATTCCTGCCCCACACCCAGGTCCAGCCATCAGGGTCTGCTTCCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 72 bp CGACAGTGGTGGACAGGGGTGGCGGCTGTGAAGATCTaGAGCAGGTTGTGGTTGGCCATGTTGAGGATCGGG +
Preference number: 6 (lower is better)
Translates to: RQWWTGVAAVKI*SRLWLAMLRIG
Trigger: CCCGATCCTCAACATGGCCAACCACAACCTGCTGCAGATCTTCACAGCCGCCACCCCTGTCCACCACTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS CCA 72 bp GTCCTTGGTGCTGTTGTAGACCCAGCCATCCAGGCATaGCTCCATGGCCCTCTGGGTGTCATTGGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: VLGAVVDPAIQA*LHGPLGVIGQA
Trigger: AGCCTGCCCAATGACACCCAGAGGGCCATGGAGCCATGCCTGGATGGCTGGGTCTACAACAGCACCAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
ENST00000545207.5
CDS CAA 72 bp GGGGTGGCGGCTGTGAAGATCTGCAGCAGGTTGTGGTaGGCCATGTTGAGGATCGGGAGGCCCAGTATGGCT +
Preference number: 6 (lower is better)
Translates to: GVAAVKICSRLW*AMLRIGRPSMA
Trigger: AGCCATACTGGGCCTCCCGATCCTCAACATGGCCAACCACAACCTGCTGCAGATCTTCACAGCCGCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS CAA 90 bp TGGTGGACAGGGGTGGCGGCTGTGAAGATCTGCAGCAGGTTGTGGTaGGCCATGTTGAGGATCGGGAGGCCCAGTATGGCTACATGCAGG +
Preference number: 6 (lower is better)
Translates to: WWTGVAAVKICSRLW*AMLRIGRPSMATCR
Trigger: CCTGCATGTAGCCATACTGGGCCTCCCGATCCTCAACATGGCCAACCACAACCTGCTGCAGATCTTCACAGCCGCCACCCCTGTCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS CCA 72 bp GGGAGGCCCAGTATGGCTACATGCAGGAACTGGAAATaGCCCATGCTTCCCACACGGTCCAGGATCTCCGAG +
Preference number: 6 (lower is better)
Translates to: GRPSMATCRNWK*PMLPTRSRISE
Trigger: CTCGGAGATCCTGGACCGTGTGGGAAGCATGGGCCATTTCCAGTTCCTGCATGTAGCCATACTGGGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS CCA 72 bp ACAGGGGTGGCGGCTGTGAAGATCTGCAGCAGGTTGTaGTTGGCCATGTTGAGGATCGGGAGGCCCAGTATG +
Preference number: 6 (lower is better)
Translates to: TGVAAVKICSRL*LAMLRIGRPSM
Trigger: CATACTGGGCCTCCCGATCCTCAACATGGCCAACCACAACCTGCTGCAGATCTTCACAGCCGCCACCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS CAA 90 bp CTTGCGGTGTACTTGGCCTTGGCCAAGGAGATCTCCTTCTGCAGGTaGAGTTTGAGCTCCTTCGGGCAGAGGAGGGGGAGGGGTGCCATT +
Preference number: 6 (lower is better)
Translates to: LAVYLALAKEISFCR*SLSSFGQRRGRGAI
Trigger: AATGGCACCCCTCCCCCTCCTCTGCCCGAAGGAGCTCAAACTCAACCTGCAGAAGGAGATCTCCTTGGCCAAGGCCAAGTACACCGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CAA 90 bp GGGGTGGCGGCTGTGAAGATCTGCAGCAGGTTGTGGTTGGCCATGTaGAGGATCGGGAGGCCCAGTATGGCTACATGCAGGAACTGGAAA +
Preference number: 6 (lower is better)
Translates to: GVAAVKICSRLWLAM*RIGRPSMATCRNWK
Trigger: TTTCCAGTTCCTGCATGTAGCCATACTGGGCCTCCCGATCCTCAACATGGCCAACCACAACCTGCTGCAGATCTTCACAGCCGCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS CAA 90 bp GACAGAAGGTCATGCGGCGCAGCATGGGTATCCGGAACAGGTCACTaGCGGTGTACTTGGCCTTGGCCAAGGAGATCTCCTTCTGCAGGT +
Preference number: 6 (lower is better)
Translates to: DRRSCGAAWVSGTGH*RCTWPWPRRSPSAG
Trigger: ACCTGCAGAAGGAGATCTCCTTGGCCAAGGCCAAGTACACCGCAAGTGACCTGTTCCGGATACCCATGCTGCGCCGCATGACCTTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000539841.1
ENST00000545207.5
CDS CAA 90 bp GCTTCTGCATCCCCACGGCTACTGACATCCTCCCCACGGATGCTGTaGATATCGCCCTCCGTTGGGTCTTCCTGCTGTTCTGATGCTGAC +
Preference number: 6 (lower is better)
Translates to: ASASPRLLTSSPRML*ISPSVGSSCCSDAD
Trigger: GTCAGCATCAGAACAGCAGGAAGACCCAACGGAGGGCGATATCAACAGCATCCGTGGGGAGGATGTCAGTAGCCGTGGGGATGCAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CAA 90 bp TCCTCAGCCCCTACCTCCAAGCTGAGCCTTTCTCCCTCTTCCTTCTaGCCATTGAAGACAGCCACCCGCCGGAGTATCTTCAGGGCCTTC +
Preference number: 6 (lower is better)
Translates to: SSAPTSKLSLSPSSF*PLKTATRRSIFRAF
Trigger: GAAGGCCCTGAAGATACTCCGGCGGGTGGCTGTCTTCAATGGCAAGAAGGAAGAGGGAGAAAGGCTCAGCTTGGAGGTAGGGGCTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 72 bp CAGAATGAACTGGCCAAAGGTGTAGCAGTACCCGAGTaGTGTCGACATGATGGCCCGCATCCGGGTAGGCAC +
Preference number: 6 (lower is better)
Translates to: QNELAKGVAVPE*CRHDGPHPGRH
Trigger: GTGCCTACCCGGATGCGGGCCATCATGTCGACAGCACTCGGGTACTGCTACACCTTTGGCCAGTTCATTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000539841.1
ENST00000542795.5
ENST00000542904.1
ENST00000545207.5
CDS GCA 72 bp CATGCGGCGCAGCATGGGTATCCGGAACAGGTCACTTaGGGTGTACTTGGCCTTGGCCAAGGAGATCTCCTT +
Preference number: 6 (lower is better)
Translates to: HAAQHGYPEQVT*GVLGLGQGDLL
Trigger: AAGGAGATCTCCTTGGCCAAGGCCAAGTACACCGCAAGTGACCTGTTCCGGATACCCATGCTGCGCCGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000539841.1
ENST00000545207.5
CDS GCA 72 bp CCTGTCGTACATGAAGTGTGGATGGACAGATGTGCATaGTCACGTGTCCACACGGTGGCCAGCTCCCATCCC +
Preference number: 6 (lower is better)
Translates to: PVVHEVWMDRCA*SRVHTVASSHP
Trigger: GGGATGGGAGCTGGCCACCGTGTGGACACGTGAGCATGCACATCTGTCCATCCACACTTCATGTACGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 72 bp AGGATCGGGAGGCCCAGTATGGCTACATGCAGGAACTaGAAATGGCCCATGCTTCCCACACGGTCCAGGATC +
Preference number: 6 (lower is better)
Translates to: RIGRPSMATCRN*KWPMLPTRSRI
Trigger: GATCCTGGACCGTGTGGGAAGCATGGGCCATTTCCAGTTCCTGCATGTAGCCATACTGGGCCTCCCGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS CCA 72 bp AGGCCAGGGAAAGACAGAAGGTCATGCGGCGCAGCATaGGTATCCGGAACAGGTCACTTGCGGTGTACTTGG +
Preference number: 6 (lower is better)
Translates to: RPGKDRRSCGAA*VSGTGHLRCTW
Trigger: CCAAGTACACCGCAAGTGACCTGTTCCGGATACCCATGCTGCGCCGCATGACCTTCTGTCTTTCCCTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000539841.1
ENST00000545207.5
CDS CAA 72 bp TCATGCGGCGCAGCATGGGTATCCGGAACAGGTCACTaGCGGTGTACTTGGCCTTGGCCAAGGAGATCTCCT +
Preference number: 6 (lower is better)
Translates to: SCGAAWVSGTGH*RCTWPWPRRSP
Trigger: AGGAGATCTCCTTGGCCAAGGCCAAGTACACCGCAAGTGACCTGTTCCGGATACCCATGCTGCGCCGCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000539841.1
ENST00000545207.5
CDS CAA 72 bp GCAAAACCGGTAGCAAACCTGAGAGGCAGAGAAGGATaGGTTAGCACCTGCAGCCAGGCAGAGGCCACTCCC +
Preference number: 6 (lower is better)
Translates to: AKPVANLRGREG*VSTCSQAEATP
Trigger: GGGAGTGGCCTCTGCCTGGCTGCAGGTGCTAACCAATCCTTCTCTGCCTCTCAGGTTTGCTACCGGTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS CAA 72 bp TACTTGGCCTTGGCCAAGGAGATCTCCTTCTGCAGGTaGAGTTTGAGCTCCTTCGGGCAGAGGAGGGGGAGG +
Preference number: 6 (lower is better)
Translates to: YLALAKEISFCR*SLSSFGQRRGR
Trigger: CCTCCCCCTCCTCTGCCCGAAGGAGCTCAAACTCAACCTGCAGAAGGAGATCTCCTTGGCCAAGGCCAAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CAA 90 bp CGCAGCATGGGTATCCGGAACAGGTCACTTGCGGTGTACTTGGCCTaGGCCAAGGAGATCTCCTTCTGCAGGTTGAGTTTGAGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: RSMGIRNRSLAVYLA*AKEISFCRLSLSSS
Trigger: GGAGGAGCTCAAACTCAACCTGCAGAAGGAGATCTCCTTGGCCAAGGCCAAGTACACCGCAAGTGACCTGTTCCGGATACCCATGCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000545207.5
CDS CAA 90 bp ATGCGGCGCAGCATGGGTATCCGGAACAGGTCACTTGCGGTGTACTaGGCCTTGGCCAAGGAGATCTCCTTCTGCAGGTTGAGTTTGAGC +
Preference number: 6 (lower is better)
Translates to: MRRSMGIRNRSLAVY*ALAKEISFCRLSLS
Trigger: GCTCAAACTCAACCTGCAGAAGGAGATCTCCTTGGCCAAGGCCAAGTACACCGCAAGTGACCTGTTCCGGATACCCATGCTGCGCCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000539841.1
ENST00000545207.5
CDS CAA 90 bp GTGTACTTGGCCTTGGCCAAGGAGATCTCCTTCTGCAGGTTGAGTTaGAGCTCCTTCGGGCAGAGGAGGGGGAGGGGTGCCATTAATGAC +
Preference number: 6 (lower is better)
Translates to: VYLALAKEISFCRLS*SSFGQRRGRGAIND
Trigger: GTCATTAATGGCACCCCTCCCCCTCCTCTGCCCGAAGGAGCTCAAACTCAACCTGCAGAAGGAGATCTCCTTGGCCAAGGCCAAGTACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 72 bp GGCCTTTTCCACCTCTGGCTCCTGCTTTGGCTTCTTTaGCCGCAGGGACCTAGGGACAGAGAGCTAAGGAAA +
Preference number: 6 (lower is better)
Translates to: GLFHLWLLLWLL*PQGPRDRELRK
Trigger: TTTCCTTAGCTCTCTGTCCCTAGGTCCCTGCGGGCAAAGAAGCCAAAGCAGGAGCCAGAGGTGGAAAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311438.12
ENST00000451262.1
ENST00000539841.1
CDS GCA 72 bp ACGCGGGTCCACAGGTTACTTACGCCCATACCTGTTTaGCTGCGAGGGTTCAGAGTAGGGATTGGTAGCCTG +
Preference number: 6 (lower is better)
Translates to: TRVHRLLTPIPV*LRGFRVGIGSL
Trigger: CAGGCTACCAATCCCTACTCTGAACCCTCGCAGGCAAACAGGTATGGGCGTAAGTAACCTGTGGACCCGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 72 bp TGCCCAGGCATACCTCTGTCACAATGGAGTCCTTGGTaGTGTTGTAGACCCAGCCATCCAGGCATGGCTCCA +
Preference number: 6 (lower is better)
Translates to: CPGIPLSQWSPW*CCRPSHPGMAP
Trigger: TGGAGCCATGCCTGGATGGCTGGGTCTACAACAGCACCAAGGACTCCATTGTGACAGAGGTATGCCTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544707.1
CDS GCA 72 bp GTATGGGGGTACGTGGGTAAGTGGAGGGAGAGGGTTTaGCCAGGCATACCTCTGTCACAATGGAGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: VWGYVGKWRERV*PGIPLSQWSPW
Trigger: CCAAGGACTCCATTGTGACAGAGGTATGCCTGGGCAAACCCTCTCCCTCCACTTACCCACGTACCCCCATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544707.1
CDS CCA 72 bp CCGCAGGGACCAGTTTTCCAGGTCTTCGATAGTCTCTaGCAAGGGCTGATTCAGGGTCTCAGGCAGGAAGAG +
Preference number: 6 (lower is better)
Translates to: PQGPVFQVFDSL*QGLIQGLRQEE
Trigger: CTCTTCCTGCCTGAGACCCTGAATCAGCCCTTGCCAGAGACTATCGAAGACCTGGAAAACTGGTCCCTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000545207.5
CDS CAA 90 bp CGCAGCATGGGTATCCGGAACAGGTCACTTGCGGTGTACTTGGCCTaGGCCAAGGAGATCTCCTTCTGCAGGTTGAGTTTGAGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: RSMGIRNRSLAVYLA*AKEISFCRLSLSSF
Trigger: GAAGGAGCTCAAACTCAACCTGCAGAAGGAGATCTCCTTGGCCAAGGCCAAGTACACCGCAAGTGACCTGTTCCGGATACCCATGCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS TCA 72 bp CAGTTTTCCAGGTCTTCGATAGTCTCTGGCAAGGGCTaGTTCAGGGTCTCAGGCAGGAAGAGGGCAGCACTG +
Preference number: 6 (lower is better)
Translates to: QFSRSSIVSGKG*FRVSGRKRAAL
Trigger: CAGTGCTGCCCTCTTCCTGCCTGAGACCCTGAATCAGCCCTTGCCAGAGACTATCGAAGACCTGGAAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000451262.1
ENST00000535878.5
ENST00000539841.1
ENST00000545207.5
CDS GCA 72 bp CCAGTATGGCTACATGCAGGAACTGGAAATGGCCCATaGTTCCCACACGGTCCAGGATCTCCGAGAAGGTCA +
Preference number: 6 (lower is better)
Translates to: PVWLHAGTGNGP*FPHGPGSPRRS
Trigger: TGACCTTCTCGGAGATCCTGGACCGTGTGGGAAGCATGGGCCATTTCCAGTTCCTGCATGTAGCCATACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000544707.1
CDS GCA 72 bp ACACCAAGTCCCACTCTGTCACAATGGAGTCCTTGGTaGTGTTGTAGACCCAGCCATCCAGGCATGGCTCCA +
Preference number: 6 (lower is better)
Translates to: TPSPTLSQWSPW*CCRPSHPGMAP
Trigger: TGGAGCCATGCCTGGATGGCTGGGTCTACAACAGCACCAAGGACTCCATTGTGACAGAGTGGGACTTGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000545207.5
CDS GCA 72 bp GCGGTGTACTTGGCCTTGGCCAAGGAGATCTCCTTCTaGAGGTTGAGTTTGAGCTCCTCCAAGCTGAGCCTT +
Preference number: 6 (lower is better)
Translates to: AVYLALAKEISF*RLSLSSSKLSL
Trigger: AAGGCTCAGCTTGGAGGAGCTCAAACTCAACCTGCAGAAGGAGATCTCCTTGGCCAAGGCCAAGTACACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000545207.5
CDS CCA 72 bp TGCACACCAAGTCCCACTCTGTCACAATGGAGTCCTTaGTGCTGTTGTAGACCCAGCCATCCAGGCATGGCT +
Preference number: 6 (lower is better)
Translates to: CTPSPTLSQWSP*CCCRPSHPGMA
Trigger: AGCCATGCCTGGATGGCTGGGTCTACAACAGCACCAAGGACTCCATTGTGACAGAGTGGGACTTGGTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000545207.5
CDS CCA 72 bp GGAGAAAGTGCTGTGATTGACTGGTCATGTCTGACGTaGGCATGGTCCAGGGTGTGGTGGCAAAGGTGCCAA +
Preference number: 6 (lower is better)
Translates to: GESAVIDWSCLT*AWSRVWWQRCQ
Trigger: TTGGCACCTTTGCCACCACACCCTGGACCATGCCCACGTCAGACATGACCAGTCAATCACAGCACTTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS CCA 72 bp TGCCTGTACACAGGCCTGTCGTACATGAAGTGTGGATaGACAGATGTGCATGCTCACGTGTCCACACGGTGG +
Preference number: 6 (lower is better)
Translates to: CLYTGLSYMKCG*TDVHAHVSTRW
Trigger: CCACCGTGTGGACACGTGAGCATGCACATCTGTCCATCCACACTTCATGTACGACAGGCCTGTGTACAGGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 72 bp GGATACAGGGGAGGCAGACAGCTCCTTTATGAAGTCTaGCTTCGAAGGGGAGAAAGAGCCAGTGTGGCCCTT +
Preference number: 6 (lower is better)
Translates to: GYRGGRQLLYEV*LRRGERASVAL
Trigger: AAGGGCCACACTGGCTCTTTCTCCCCTTCGAAGCCAGACTTCATAAAGGAGCTGTCTGCCTCCCCTGTATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 72 bp GTTTGCCCAGGCATACCTCTGTCACAATGGAGTCCTTaGTGCTGTTGTAGACCCAGCCATCCAGGCATGGCT +
Preference number: 6 (lower is better)
Translates to: VCPGIPLSQWSP*CCCRPSHPGMA
Trigger: AGCCATGCCTGGATGGCTGGGTCTACAACAGCACCAAGGACTCCATTGTGACAGAGGTATGCCTGGGCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544707.1
CDS CCA 72 bp AGGGAGAGGGTTTGCCCAGGCATACCTCTGTCACAATaGAGTCCTTGGTGCTGTTGTAGACCCAGCCATCCA +
Preference number: 6 (lower is better)
Translates to: RERVCPGIPLSQ*SPWCCCRPSHP
Trigger: TGGATGGCTGGGTCTACAACAGCACCAAGGACTCCATTGTGACAGAGGTATGCCTGGGCAAACCCTCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544707.1
CDS CAA 90 bp TTGAGTTTGAGCTCCTCCAAGCTGAGCCTTTCTCCCTCTTCCTTCTaGCCATTGAAGACAGCCACCCGCCGGAGTATCTTCAGGGCCTTC +
Preference number: 6 (lower is better)
Translates to: LSLSSSKLSLSPSSF*PLKTATRRSIFRAF
Trigger: GAAGGCCCTGAAGATACTCCGGCGGGTGGCTGTCTTCAATGGCAAGAAGGAAGAGGGAGAAAGGCTCAGCTTGGAGGAGCTCAAACTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000545207.5
CDS CAA 90 bp GAGTTGACGCAGCATGAGGACTCTGCCCAAAAGTGGTGCTCCATATaGGATCTCCATGTACCGAGCCAGGTGGAGTCCCTGCTTAGAGAC +
Preference number: 6 (lower is better)
Translates to: ELTQHEDSAQKWCSI*DLHVPSQVESLLRD
Trigger: GTCTCTAAGCAGGGACTCCACCTGGCTCGGTACATGGAGATCCAATATGGAGCACCACTTTTGGGCAGAGTCCTCATGCTGCGTCAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 72 bp CGGATGCTGTTGATATCGCCCTCCGTTGGGTCTTCCTaGTGTTCTGATGCTGACCCTAAGTTCATCATCCCC +
Preference number: 6 (lower is better)
Translates to: RMLLISPSVGSS*CSDADPKFIIP
Trigger: GGGGATGATGAACTTAGGGTCAGCATCAGAACAGCAGGAAGACCCAACGGAGGGCGATATCAACAGCATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 72 bp TCCAGGTCGAGACCCAGTCAAACTAAGGGGAAGCATTaGTGGCTCTGTTGTCAGCTGATCCTAGGCTCCACA +
Preference number: 6 (lower is better)
Translates to: SRSRPSQTKGKH*WLCCQLILGST
Trigger: TGTGGAGCCTAGGATCAGCTGACAACAGAGCCAGCAATGCTTCCCCTTAGTTTGACTGGGTCTCGACCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 72 bp GAGTTGACGCAGCATGAGGACTCTGCCCAAAAGTGGTaGTCCATATTGGATCTCCATGTACCGAGCCAGGTG +
Preference number: 6 (lower is better)
Translates to: ELTQHEDSAQKW*SILDLHVPSQV
Trigger: CACCTGGCTCGGTACATGGAGATCCAATATGGAGCACCACTTTTGGGCAGAGTCCTCATGCTGCGTCAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 72 bp AAAAGGCCAGTAAGAGGAGGGCTGAAGAGTGACTTATaGATCCAGCACAGGGAGGGGATGAGCGTCCTTGGT +
Preference number: 6 (lower is better)
Translates to: KRPVRGGLKSDL*IQHREGMSVLG
Trigger: ACCAAGGACGCTCATCCCCTCCCTGTGCTGGATCCATAAGTCACTCTTCAGCCCTCCTCTTACTGGCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CAA 72 bp TACTTGGCCTTGGCCAAGGAGATCTCCTTCTGCAGGTaGAGTTTGAGCTCCTCCAAGCTGAGCCTTTCTCCC +
Preference number: 6 (lower is better)
Translates to: YLALAKEISFCR*SLSSSKLSLSP
Trigger: GGGAGAAAGGCTCAGCTTGGAGGAGCTCAAACTCAACCTGCAGAAGGAGATCTCCTTGGCCAAGGCCAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000545207.5
CDS CAA 72 bp GGTATCCGGAACAGGTCACTTGCGGTGTACTTGGCCTaGGCCAAGGAGATCTCCTTCTGCAGGTTGAGTTTG +
Preference number: 6 (lower is better)
Translates to: GIRNRSLAVYLA*AKEISFCRLSL
Trigger: CAAACTCAACCTGCAGAAGGAGATCTCCTTGGCCAAGGCCAAGTACACCGCAAGTGACCTGTTCCGGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000539841.1
ENST00000545207.5
CDS CAA 72 bp AAGATAGACTGGGCCATCTCCTTCAGTTTGTTGGAGTaGCACACCAAGTCCCACTGGTGGCCGGGTCTGGAT +
Preference number: 6 (lower is better)
Translates to: KIDWAISFSLLE*HTKSHWWPGLD
Trigger: ATCCAGACCCGGCCACCAGTGGGACTTGGTGTGCAACTCCAACAAACTGAAGGAGATGGCCCAGTCTATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535878.5
CDS CAA 90 bp TCATGCACAGGCGTGGTGTACACACCTCAGAGCACTCACATGTGCTaGCTCATGTTCACATCAGTCCAGCTTGCATGTACCTGTGGTGCC +
Preference number: 6 (lower is better)
Translates to: SCTGVVYTPQSTHMC*LMFTSVQLACTCGA
Trigger: GGCACCACAGGTACATGCAAGCTGGACTGATGTGAACATGAGCAAGCACATGTGAGTGCTCTGAGGTGTGTACACCACGCCTGTGCATGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS TCA 72 bp TGGTTGGGCAGCAGTTTAACATCCAGACTGGCGAGGTaGGCATTGAGCTGTATGCCTGGGTCAGATGTTTCC +
Preference number: 6 (lower is better)
Translates to: WLGSSLTSRLAR*ALSCMPGSDVS
Trigger: GGAAACATCTGACCCAGGCATACAGCTCAATGCTCACCTCGCCAGTCTGGATGTTAAACTGCTGCCCAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS TCA 72 bp AGAAGGTGGATACAGGGGAGGCAGACAGCTCCTTTATaGAGTCTGGCTTCGAAGGGGAGAAAGAGCCAGTGT +
Preference number: 6 (lower is better)
Translates to: RRWIQGRQTAPL*SLASKGRKSQC
Trigger: ACACTGGCTCTTTCTCCCCTTCGAAGCCAGACTTCATAAAGGAGCTGTCTGCCTCCCCTGTATCCACCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS TCA 72 bp GCTGGGCATGGTGAAGAGCAGGGGCAGTCTAGGATCTaGAAAAGATCAGTTGAGGCTGGATTTCTGGGTACG +
Preference number: 6 (lower is better)
Translates to: AGHGEEQGQSRI*KRSVEAGFLGT
Trigger: CGTACCCAGAAATCCAGCCTCAACTGATCTTTTTCAGATCCTAGACTGCCCCTGCTCTTCACCATGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 72 bp ATTGACTTGGGGAGGGTCCAGCAGATTCCAAGTGTCTaGCAGGCCCCTCGCAACATTCTGAGTAAGGAATTC +
Preference number: 6 (lower is better)
Translates to: IDLGRVQQIPSV*QAPRNILSKEF
Trigger: GAATTCCTTACTCAGAATGTTGCGAGGGGCCTGGCAGACACTTGGAATCTGCTGGACCCTCCCCAAGTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 72 bp TCTCGGAGACCAAAGGAGGCAGTAAATGATCTCTCCTaGTTGGGCAGCAGTTTAACATCCAGACTGGCGAGG +
Preference number: 6 (lower is better)
Translates to: SRRPKEAVNDLS*LGSSLTSRLAR
Trigger: CCTCGCCAGTCTGGATGTTAAACTGCTGCCCAACCAGGAGAGATCATTTACTGCCTCCTTTGGTCTCCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS CCA 72 bp ATGAAGTCTGGCTTCGAAGGGGAGAAAGAGCCAGTGTaGCCCTTGGAAGGAGATACAACATCCTGGCATGTG +
Preference number: 6 (lower is better)
Translates to: MKSGFEGEKEPV*PLEGDTTSWHV
Trigger: CACATGCCAGGATGTTGTATCTCCTTCCAAGGGCCACACTGGCTCTTTCTCCCCTTCGAAGCCAGACTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 72 bp GGAGTGCCCTGTGGTCTAGTTGGTCACCACCAGAGATaGCAGATTATGGAACTGTTCAGTTGGCAGATTCCG +
Preference number: 6 (lower is better)
Translates to: GVPCGLVGHHQR*QIMELFSWQIP
Trigger: CGGAATCTGCCAACTGAACAGTTCCATAATCTGCCATCTCTGGTGGTGACCAACTAGACCACAGGGCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 72 bp ATGATCATAAATGGCCAGTCCCAGCAGCTTCCCACATaGCTGGATGACAGATGGGCTAGGATGGGAGAACCT +
Preference number: 6 (lower is better)
Translates to: MIINGQSQQLPT*LDDRWARMGEP
Trigger: AGGTTCTCCCATCCTAGCCCATCTGTCATCCAGCCATGTGGGAAGCTGCTGGGACTGGCCATTTATGATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CAA 72 bp CCTGCCATGAAGATAGACTGGGCCATCTCCTTCAGTTaGTTGGAGTTGCACACCAAGTCCCACTCCCAAGGA +
Preference number: 6 (lower is better)
Translates to: PAMKIDWAISFS*LELHTKSHSQG
Trigger: TCCTTGGGAGTGGGACTTGGTGTGCAACTCCAACAAACTGAAGGAGATGGCCCAGTCTATCTTCATGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542795.5
CDS CAA 90 bp CTTGTGCCAACTGCAACTGATGATAGGGGCTGCTTGAGTGTCCTTTaGAGGTTTCTGAGATCGTGTCTGGGCTCAGGGAGAAAGTGCTGT +
Preference number: 6 (lower is better)
Translates to: LVPTATDDRGCLSVL*RFLRSCLGSGRKCC
Trigger: ACAGCACTTTCTCCCTGAGCCCAGACACGATCTCAGAAACCTCAAAAGGACACTCAAGCAGCCCCTATCATCAGTTGCAGTTGGCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS TCA 72 bp TTCCACATTCAAGATGACGGTGCTCAGGGTAATGCCTaGGATGCCAAAGCCACACAGGAAGCGGAAGACCAT +
Preference number: 6 (lower is better)
Translates to: FHIQDDGAQGNA*DAKATQEAEDH
Trigger: ATGGTCTTCCGCTTCCTGTGTGGCTTTGGCATCTCAGGCATTACCCTGAGCACCGTCATCTTGAATGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000542795.5
ENST00000542904.1
ENST00000545207.5
CDS TCA 72 bp CTGGAGGGAATCTCGGAGACCAAAGGAGGCAGTAAATaGTCTCTCCTGGTTGGGCAGCAGTTTAACATCCAG +
Preference number: 6 (lower is better)
Translates to: LEGISETKGGSK*SLLVGQQFNIQ
Trigger: CTGGATGTTAAACTGCTGCCCAACCAGGAGAGATCATTTACTGCCTCCTTTGGTCTCCGAGATTCCCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS TCA 72 bp AATCCATCCAAGCTAGGCCTTAAGGATGAGTTGGCATaGGCCAAGTGCTGTAGAGTTGGATGGGGAGAAGCC +
Preference number: 6 (lower is better)
Translates to: NPSKLGLKDELA*AKCCRVGWGEA
Trigger: GGCTTCTCCCCATCCAACTCTACAGCACTTGGCTCATGCCAACTCATCCTTAAGGCCTAGCTTGGATGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 72 bp CATGTTCACATCAGTCCAGCTTGCATGTACCTGTGGTaGCTGTACACAGGCCTGTCGTACATGAAGTGTGGA +
Preference number: 6 (lower is better)
Translates to: HVHISPACMYLW*LYTGLSYMKCG
Trigger: TCCACACTTCATGTACGACAGGCCTGTGTACAGGCACCACAGGTACATGCAAGCTGGACTGATGTGAACATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 72 bp CCTTCGAGGACTTTCCAGACAAGACCAACCAGCGTATaGACTCTGGTGTCCACCAGGATGATAGGAAGAAGA +
Preference number: 6 (lower is better)
Translates to: PSRTFQTRPTSV*TLVSTRMIGRR
Trigger: TCTTCTTCCTATCATCCTGGTGGACACCAGAGTCCATACGCTGGTTGGTCTTGTCTGGAAAGTCCTCGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000535878.5
ENST00000539841.1
ENST00000542795.5
ENST00000545207.5
CDS CCA 72 bp GCTCATGTTCACATCAGTCCAGCTTGCATGTACCTGTaGTGCCTGTACACAGGCCTGTCGTACATGAAGTGT +
Preference number: 6 (lower is better)
Translates to: AHVHISPACMYL*CLYTGLSYMKC
Trigger: ACACTTCATGTACGACAGGCCTGTGTACAGGCACCACAGGTACATGCAAGCTGGACTGATGTGAACATGAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 72 bp TCACATGTCCTAAGCATGGGTTTGAAACGATTGACTTaGGGAGGGTCCAGCAGATTCCAAGTGTCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: SHVLSMGLKRLT*GGSSRFQVSAR
Trigger: CCTGGCAGACACTTGGAATCTGCTGGACCCTCCCCAAGTCAATCGTTTCAAACCCATGCTTAGGACATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CAA 72 bp CCTGCCATGAAGATAGACTGGGCCATCTCCTTCAGTTaGTTGGAGTTGCACACCAAGTCCCACTCTGTCACA +
Preference number: 6 (lower is better)
Translates to: PAMKIDWAISFS*LELHTKSHSVT
Trigger: TGTGACAGAGTGGGACTTGGTGTGCAACTCCAACAAACTGAAGGAGATGGCCCAGTCTATCTTCATGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000545207.5
CDS CAA 72 bp TTAAGGATGAGTTGGCATGAGCCAAGTGCTGTAGAGTaGGATGGGGAGAAGCCAAGTGCTGGGCATGGTGAA +
Preference number: 6 (lower is better)
Translates to: LRMSWHEPSAVE*DGEKPSAGHGE
Trigger: TTCACCATGCCCAGCACTTGGCTTCTCCCCATCCAACTCTACAGCACTTGGCTCATGCCAACTCATCCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CAA 72 bp AAGATAGACTGGGCCATCTCCTTCAGTTTGTTGGAGTaGCACACCAAGTCCCACTCCCAAGGACCGTTTCCT +
Preference number: 6 (lower is better)
Translates to: KIDWAISFSLLE*HTKSHSQGPFP
Trigger: AGGAAACGGTCCTTGGGAGTGGGACTTGGTGTGCAACTCCAACAAACTGAAGGAGATGGCCCAGTCTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542795.5
CDS CAA 90 bp ACACTCTTACTTAGATCACATGTCCTAAGCATGGGTTTGAAACGATaGACTTGGGGAGGGTCCAGCAGATTCCAAGTGTCTGCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: TLLLRSHVLSMGLKR*TWGGSSRFQVSARP
Trigger: GGGCCTGGCAGACACTTGGAATCTGCTGGACCCTCCCCAAGTCAATCGTTTCAAACCCATGCTTAGGACATGTGATCTAAGTAAGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 72 bp GCAGCCACTCTGGGCTTGGTCAGTCATCTGCTCATATaGATGCTGGGACGTGTAGACACACACATGTATTTT +
Preference number: 6 (lower is better)
Translates to: AATLGLVSHLLI*MLGRVDTHMYF
Trigger: AAAATACATGTGTGTGTCTACACGTCCCAGCATGCATATGAGCAGATGACTGACCAAGCCCAGAGTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 72 bp GAGAGAAGGAGGAATCCAGAATGGGGATTTGGGGATTaGAAGAAGAACGGGTCTTGTGAGTGGCCAGTTTGT +
Preference number: 6 (lower is better)
Translates to: ERRRNPEWGFGD*KKNGSCEWPVC
Trigger: ACAAACTGGCCACTCACAAGACCCGTTCTTCTTGCAATCCCCAAATCCCCATTCTGGATTCCTCCTTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CAA 72 bp AAGATAGACTGGGCCATCTCCTTCAGTTTGTTGGAGTaGCACACCAAGTCCCACTCTGTCACAATGGAGTCC +
Preference number: 6 (lower is better)
Translates to: KIDWAISFSLLE*HTKSHSVTMES
Trigger: GGACTCCATTGTGACAGAGTGGGACTTGGTGTGCAACTCCAACAAACTGAAGGAGATGGCCCAGTCTATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000545207.5
CDS CAA 72 bp ATCACATGTCCTAAGCATGGGTTTGAAACGATTGACTaGGGGAGGGTCCAGCAGATTCCAAGTGTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: ITCPKHGFETID*GRVQQIPSVCQ
Trigger: CTGGCAGACACTTGGAATCTGCTGGACCCTCCCCAAGTCAATCGTTTCAAACCCATGCTTAGGACATGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CAA 90 bp AGTATACCTGCCATGAAGATAGACTGGGCCATCTCCTTCAGTTTGTaGGAGTTGCACACCAAGTCCCACTCTGTCACAATGGAGTCCTTG +
Preference number: 6 (lower is better)
Translates to: SIPAMKIDWAISFSL*ELHTKSHSVTMESL
Trigger: CAAGGACTCCATTGTGACAGAGTGGGACTTGGTGTGCAACTCCAACAAACTGAAGGAGATGGCCCAGTCTATCTTCATGGCAGGTATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311438.12
ENST00000336232.7
ENST00000430500.6
ENST00000545207.5
CDS CAA 90 bp AGGAATAAGCAGCAATGGAGAGAAGGAGGAATCCAGAATGGGGATTaGGGGATTGCAAGAAGAACGGGTCTTGTGAGTGGCCAGTTTGTC +
Preference number: 6 (lower is better)
Translates to: RNKQQWREGGIQNGD*GIARRTGLVSGQFV
Trigger: GACAAACTGGCCACTCACAAGACCCGTTCTTCTTGCAATCCCCAAATCCCCATTCTGGATTCCTCCTTCTCTCCATTGCTGCTTATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CAA 90 bp AGTATACCTGCCATGAAGATAGACTGGGCCATCTCCTTCAGTTTGTaGGAGTTGCACACCAAGTCCCACTCCCAAGGACCGTTTCCTTTT +
Preference number: 6 (lower is better)
Translates to: SIPAMKIDWAISFSL*ELHTKSHSQGPFPF
Trigger: AAAAGGAAACGGTCCTTGGGAGTGGGACTTGGTGTGCAACTCCAACAAACTGAAGGAGATGGCCCAGTCTATCTTCATGGCAGGTATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542795.5
CDS CCA 72 bp GATGGTAGAGCGAGAGGAGCTGCTTTTGGAGCTCTTTaGTTACAAGGAGCAGCCCATCAAGTTAGCTTAAAC +
Preference number: 6 (lower is better)
Translates to: DGRARGAAFGAL*LQGAAHQVSLN
Trigger: GTTTAAGCTAACTTGATGGGCTGCTCCTTGTAACCAAAGAGCTCCAAAAGCAGCTCCTCTCGCTCTACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 72 bp GGATTTGGGGATTGCAAGAAGAACGGGTCTTGTGAGTaGCCAGTTTGTCCTGAACAACATCTCAGTTCACCA +
Preference number: 6 (lower is better)
Translates to: GFGDCKKNGSCE*PVCPEQHLSSP
Trigger: TGGTGAACTGAGATGTTGTTCAGGACAAACTGGCCACTCACAAGACCCGTTCTTCTTGCAATCCCCAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CAA 72 bp CTTCTTGTGCCAACTGCAACTGATGATAGGGGCTGCTaGAGTGTCCTTTTGAGGTTTCTGAGATCGTGTCTG +
Preference number: 6 (lower is better)
Translates to: LLVPTATDDRGC*SVLLRFLRSCL
Trigger: CAGACACGATCTCAGAAACCTCAAAAGGACACTCAAGCAGCCCCTATCATCAGTTGCAGTTGGCACAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS CAA 72 bp AAACACCCACTAAGACACAACTGTGATCACAGTTCATaGTCTGATAAGCAGGGTGCTCAACCCAGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: KHPLRHNCDHSS*SDKQGAQPRLW
Trigger: CCAGAGCCTGGGTTGAGCACCCTGCTTATCAGACAATGAACTGTGATCACAGTTGTGTCTTAGTGGGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CAA 90 bp CCTCTCTCTGAACTGTGGGATCCCTTTGAAGGGTTCCTGGACAAATaGAATCCTATTCACAAAGAAATGGCCAGGATGGGAAGCAGAAAC +
Preference number: 6 (lower is better)
Translates to: PLSELWDPFEGFLDK*NPIHKEMARMGSRN
Trigger: GTTTCTGCTTCCCATCCTGGCCATTTCTTTGTGAATAGGATTCAATTTGTCCAGGAACCCTTCAAAGGGATCCCACAGTTCAGAGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS TCA 72 bp ACTCATGCTCTTAACCACTGCTTCTCCAGTGGCAAGTaGCTTTCCTTGTTCTGCCTCAGTTTCCTGATCTGT +
Preference number: 6 (lower is better)
Translates to: THALNHCFSSGK*LSLFCLSFLIC
Trigger: ACAGATCAGGAAACTGAGGCAGAACAAGGAAAGTCACTTGCCACTGGAGAAGCAGTGGTTAAGAGCATGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS GCA 72 bp TCACTTCTTGTGCCAACTGCAACTGATGATAGGGGCTaGTTGAGTGTCCTTTTGAGGTTTCTGAGATCGTGT +
Preference number: 6 (lower is better)
Translates to: SLLVPTATDDRG*LSVLLRFLRSC
Trigger: ACACGATCTCAGAAACCTCAAAAGGACACTCAAGCAGCCCCTATCATCAGTTGCAGTTGGCACAAGAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS CCA 72 bp AAGGTGCCAATAACTGACTCTAGAGAAGATCAGGACTaGAGGGAATCTCGGAGACCAAAGGAGGCAGTAAAT +
Preference number: 6 (lower is better)
Translates to: KVPITDSREDQD*RESRRPKEAVN
Trigger: ATTTACTGCCTCCTTTGGTCTCCGAGATTCCCTCCAGTCCTGATCTTCTCTAGAGTCAGTTATTGGCACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS CCA 72 bp AATGAGATTTGGATCTGGAGTGCCCTGTGGTCTAGTTaGTCACCACCAGAGATGGCAGATTATGGAACTGTT +
Preference number: 6 (lower is better)
Translates to: NEIWIWSALWSS*SPPEMADYGTV
Trigger: AACAGTTCCATAATCTGCCATCTCTGGTGGTGACCAACTAGACCACAGGGCACTCCAGATCCAAATCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CAA 72 bp AAGAGCAGGGGCAGTCTAGGATCTGAAAAAGATCAGTaGAGGCTGGATTTCTGGGTACGAGGTAGAGTGTTA +
Preference number: 6 (lower is better)
Translates to: KSRGSLGSEKDQ*RLDFWVRGRVL
Trigger: TAACACTCTACCTCGTACCCAGAAATCCAGCCTCAACTGATCTTTTTCAGATCCTAGACTGCCCCTGCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CAA 72 bp CTTAGATCACATGTCCTAAGCATGGGTTTGAAACGATaGACTTGGGGAGGGTCCAGCAGATTCCAAGTGTCT +
Preference number: 6 (lower is better)
Translates to: LRSHVLSMGLKR*TWGGSSRFQVS
Trigger: AGACACTTGGAATCTGCTGGACCCTCCCCAAGTCAATCGTTTCAAACCCATGCTTAGGACATGTGATCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 72 bp ATAAACATAATTTTTGTCTTCGAGTCTGAAACCCATTaGTCTAGCCTTGCTCTGTGGGGTTCCAGAGGGCAG +
Preference number: 6 (lower is better)
Translates to: INIIFVFESETH*SSLALWGSRGQ
Trigger: CTGCCCTCTGGAACCCCACAGAGCAAGGCTAGACCAATGGGTTTCAGACTCGAAGACAAAAATTATGTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS CCA 72 bp ATACCACCATACTTTTTGCCCAGTCCAAGTCAGATCTaGAAAGGAGCTTTCATGTCATCTAGCCCAATTGCG +
Preference number: 6 (lower is better)
Translates to: IPPYFLPSPSQI*KGAFMSSSPIA
Trigger: CGCAATTGGGCTAGATGACATGAAAGCTCCTTTCCAGATCTGACTTGGACTGGGCAAAAAGTATGGTGGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS CAA 72 bp GAACTGTGGGATCCCTTTGAAGGGTTCCTGGACAAATaGAATCCTATTCACAAAGAAATGGCCAGGATGGGA +
Preference number: 6 (lower is better)
Translates to: ELWDPFEGFLDK*NPIHKEMARMG
Trigger: TCCCATCCTGGCCATTTCTTTGTGAATAGGATTCAATTTGTCCAGGAACCCTTCAAAGGGATCCCACAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS CAA 72 bp CTGAGTAATGCTTTGCATGCCTGTGTCCTGCTATGTTaGTGTTTTCCCCTGCCTCTGATCCTCTATTTCCAT +
Preference number: 6 (lower is better)
Translates to: LSNALHACVLLC*CFPLPLILYFH
Trigger: ATGGAAATAGAGGATCAGAGGCAGGGGAAAACACAAACATAGCAGGACACAGGCATGCAAAGCATTACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS CAA 72 bp ACACTCTTACTTAGATCACATGTCCTAAGCATGGGTTaGAAACGATTGACTTGGGGAGGGTCCAGCAGATTC +
Preference number: 6 (lower is better)
Translates to: TLLLRSHVLSMG*KRLTWGGSSRF
Trigger: GAATCTGCTGGACCCTCCCCAAGTCAATCGTTTCAAACCCATGCTTAGGACATGTGATCTAAGTAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS TCA 72 bp AACTGTGGGATCCCTTTGAAGGGTTCCTGGACAAATTaGATCCTATTCACAAAGAAATGGCCAGGATGGGAA +
Preference number: 6 (lower is better)
Translates to: NCGIPLKGSWTN*ILFTKKWPGWE
Trigger: TTCCCATCCTGGCCATTTCTTTGTGAATAGGATTCAATTTGTCCAGGAACCCTTCAAAGGGATCCCACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS CCA 72 bp TATGTGATAAATGAGATTTGGATCTGGAGTGCCCTGTaGTCTAGTTGGTCACCACCAGAGATGGCAGATTAT +
Preference number: 6 (lower is better)
Translates to: YVINEIWIWSAL*SSWSPPEMADY
Trigger: ATAATCTGCCATCTCTGGTGGTGACCAACTAGACCACAGGGCACTCCAGATCCAAATCTCATTTATCACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS TCA 72 bp TTTAGATTTTATCCCAGTGGGAAGTCACCAGAAGGTTaGCGCAGGGGTACAATACCATCCCTTTCACATTTA +
Preference number: 6 (lower is better)
Translates to: FRFYPSGKSPEG*RRGTIPSLSHL
Trigger: TAAATGTGAAAGGGATGGTATTGTACCCCTGCGTCAACCTTCTGGTGACTTCCCACTGGGATAAAATCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CAA 90 bp TCATATAAAACACTCTTACTTAGATCACATGTCCTAAGCATGGGTTaGAAACGATTGACTTGGGGAGGGTCCAGCAGATTCCAAGTGTCT +
Preference number: 6 (lower is better)
Translates to: SYKTLLLRSHVLSMG*KRLTWGGSSRFQVS
Trigger: AGACACTTGGAATCTGCTGGACCCTCCCCAAGTCAATCGTTTCAAACCCATGCTTAGGACATGTGATCTAAGTAAGAGTGTTTTATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CCA 72 bp CTAGGATCTGAAAAAGATCAGTTGAGGCTGGATTTCTaGGTACGAGGTAGAGTGTTAAAAACCAAAGCTGTT +
Preference number: 6 (lower is better)
Translates to: LGSEKDQLRLDF*VRGRVLKTKAV
Trigger: AACAGCTTTGGTTTTTAACACTCTACCTCGTACCCAGAAATCCAGCCTCAACTGATCTTTTTCAGATCCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS TCA 72 bp TGGAAGGAGATACAACATCCTGGCATGTGTTTGTGTTaGTTTTTGTTAAGTTGGGAGAAGCCTAAGCTTGTT +
Preference number: 6 (lower is better)
Translates to: WKEIQHPGMCLC*FLLSWEKPKLV
Trigger: AACAAGCTTAGGCTTCTCCCAACTTAACAAAAATCAACACAAACACATGCCAGGATGTTGTATCTCCTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CAA 72 bp AATGGGAATAATAGTGTCACTTACTTGCAAGTGGTATaGAATGAGATTGTGTACCTAGCAGAGTGTCAGGTC +
Preference number: 6 (lower is better)
Translates to: NGNNSVTYLQVV*NEIVYLAECQV
Trigger: GACCTGACACTCTGCTAGGTACACAATCTCATTCAATACCACTTGCAAGTAAGTGACACTATTATTCCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539841.1
CDS CAA 90 bp AACTTAAAGCTGAGTAATGCTTTGCATGCCTGTGTCCTGCTATGTTaGTGTTTTCCCCTGCCTCTGATCCTCTATTTCCATTTATATTTT +
Preference number: 6 (lower is better)
Translates to: NLKLSNALHACVLLC*CFPLPLILYFHLYF
Trigger: AAAATATAAATGGAAATAGAGGATCAGAGGCAGGGGAAAACACAAACATAGCAGGACACAGGCATGCAAAGCATTACTCAGCTTTAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS CCA 72 bp GTTCTTGTTCTTGTCTTAAAATACCTCAAGTTCTTTTaGAAGGGTATAGGTGTTATCAACCAACTAACACCC +
Preference number: 6 (lower is better)
Translates to: VLVLVLKYLKFF*KGIGVINQLTP
Trigger: GGGTGTTAGTTGGTTGATAACACCTATACCCTTCCAAAAGAACTTGAGGTATTTTAAGACAAGAACAAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1
CDS CAA 72 bp TGTTCTTGTTCTTGTCTTAAAATACCTCAAGTTCTTTaGGAAGGGTATAGGTGTTATCAACCAACTAACACC +
Preference number: 6 (lower is better)
Translates to: CSCSCLKIPQVL*EGYRCYQPTNT
Trigger: GGTGTTAGTTGGTTGATAACACCTATACCCTTCCAAAAGAACTTGAGGTATTTTAAGACAAGAACAAGAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451262.1
ENST00000539841.1