RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC22A7 (Homo sapiens)

Ensembl gene IDs: ENSG00000137204

Ensembl transcript IDs: ENST00000372574.7, ENST00000372585.10, ENST00000372589.7, ENST00000436107.1, ENST00000449231.5, ENST00000451757.5, ENST00000480882.5, ENST00000487175.5, ENST00000498232.1

Found 322 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACAGCATaGCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCT +
Preference number: 1 (lower is better)
Translates to: LGPGIGSPSTTQWTA*PPAPLVPEVSYASP
Trigger: AGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCATGCTGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR CCA 90 bp TTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTaGACAGCATGCCCACCAGCCCCATTGGTACCAGAAGTCTCATAT +
Preference number: 1 (lower is better)
Translates to: FLSLGPGIGSPSTTQ*TACPPAPLVPEVSY
Trigger: ATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCATGCTGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR CCA 90 bp GCAGTCCTAGCACCACACAGTGGACAGCATGCCCACCAGCCCCATTaGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCACCATCT +
Preference number: 1 (lower is better)
Translates to: AVLAPHSGQHAHQPH*YQKSHMLVLSLAPS
Trigger: AGATGGTGCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCATGCTGTCCACTGTGTGGTGCTAGGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR GCA 90 bp ACCGTGAGAGGGGTGCCCAGCAGCCCACTGCATTCTGGGAAGTCAACTGTTCCTCTGAGTTGCAGGGCCTaGCCTTCTGCTCTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: TVRGVPSSPLHSGKSTVPLSCRA*PSALPA
Trigger: GGCTGGGAGAGCAGAAGGGCAGGCCCTGCAACTCAG...AGGAACAGTTGACTTCCCAGAATGCAGTGGGCTGCTGGGCACCCCTCTCACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR CCA 90 bp CCTGCAGGGTGCCTCGGAGGTAGCAGGGCCAGCCATGAGAACAAAAAGCTCTGTGCTGCAGAGCTTCTGTaGAGGGCCTGCCTCCACTCC +
Preference number: 2 (lower is better)
Translates to: PAGCLGGSRASHENKKLCAAELL*RACLHS
Trigger: GGAGTGGAGGCAGGCCCTCCACAGAAGCTCTGCAGC...ACAGAGCTTTTTGTTCTCATGGCTGGCCCTGCTACCTCCGAGGCACCCTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR TCA 90 bp CTGTTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGAATCCTCCCCAACCGTaGGAGGGGTGCCCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: LFFLSLGPGIGSPSTTQWNPPQP*EGCPAA
Trigger: GGCTGCTGGGCACCCCTCTCACGGTTGGGGAGGATT...CCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR GCA 90 bp CTGTTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGCTGAGTTGCAGGGCCTaGCCTTCTGCTCTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: LFFLSLGPGIGSPSTTQWLSCRA*PSALPA
Trigger: GGCTGGGAGAGCAGAAGGGCAGGCCCTGCAACTCAG...CCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR CCA 90 bp TTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACAGCATGCCCAGGGCAGACTCAGTaGCTTCCTATCCAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: LSLGPGIGSPSTTQWTACPGQTQ*LPIQGS
Trigger: AGAGCCCTGGATAGGAAGCCACTGAGTCTGCCCTGG...GCATGCTGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR CCA 90 bp CAACTCTTCTTTGGGCATGAGACCAGTGGGTTGGAGGATGGGGAGTGTGGGGGTCCTAGCACCACACAGTaGACAGCATGCCCACCAGCC +
Preference number: 2 (lower is better)
Translates to: QLFFGHETSGLEDGECGGPSTTQ*TACPPA
Trigger: GGCTGGTGGGCATGCTGTCCACTGTGTGGTGCTAGG...ACCCCCACACTCCCCATCCTCCAACCCACTGGTCTCATGCCCAAAGAAGAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR TCA 90 bp TCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACAGTCGATACTCCCAGCCTaGGTTGCAGGGCCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: SFCPLGLALAVLAPHSGQSILPA*VAGPAL
Trigger: AAGGGCAGGCCCTGCAACTCAGGCTGGGAGTATCGA...CTGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR TCA 90 bp GGGAGTGTGGGGGTTGGGATGACATGCATTGCCCTGCAGGGTGCCTCGGAGGTAATAATCAAGGATGGATaGGCAGAGGGAGCGGGTACT +
Preference number: 2 (lower is better)
Translates to: GSVGVGMTCIALQGASEVIIKDG*AEGAGT
Trigger: AGTACCCGCTCCCTCTGCTCATCCATCCTTGATTAT...TACCTCCGAGGCACCCTGCAGGGCAATGCATGTCATCCCAACCCCCACACTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR TCA 90 bp ACAGCATGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCAATCCTCCCCAACCGTaGGAGGGGTGCCCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: TACPPAPLVPEVSYASPFNPPQP*EGCPAA
Trigger: GGCTGCTGGGCACCCCTCTCACGGTTGGGGAGGATT...GAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCATGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR GCA 90 bp TCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACAGACTCCCAGCCTGAGTTaGAGGGCCTGCCCTTCTGCT +
Preference number: 2 (lower is better)
Translates to: SFCPLGLALAVLAPHSGQTPSLS*RACPSA
Trigger: AGCAGAAGGGCAGGCCCTGCAACTCAGGCTGGGAGT...CTGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR GCA 90 bp CTCTGTTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTACTCCCAGCCTGAGTTaGAGGGCCTGCCCTTCTGCT +
Preference number: 2 (lower is better)
Translates to: LCSFCPLGLALAVLAPHSTPSLS*RACPSA
Trigger: AGCAGAAGGGCAGGCCCTGCAACTCAGGCTGGGAGT...ACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR GCA 90 bp CAACTCTTCTTTGGGCATGAGACCAGTGGGTTGGAGGATGGGGAGTGTGGGGGTTGCCCAGCAGCCCACTaGATTCTGGGAAGTCAACTG +
Preference number: 2 (lower is better)
Translates to: QLFFGHETSGLEDGECGGCPAAH*ILGSQL
Trigger: CAGTTGACTTCCCAGAATGCAGTGGGCTGCTGGGCA...ACCCCCACACTCCCCATCCTCCAACCCACTGGTCTCATGCCCAAAGAAGAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR TCA 90 bp ACCGTGAGAGGGGTGCCCAGCAGCCCACTGCATTCTGGGAAGTCAACTGTTCCTATAATCAAGGATGGATaGGCAGAGGGAGCGGGTACT +
Preference number: 2 (lower is better)
Translates to: TVRGVPSSPLHSGKSTVPIIKDG*AEGAGT
Trigger: AGTACCCGCTCCCTCTGCTCATCCATCCTTGATTAT...AGGAACAGTTGACTTCCCAGAATGCAGTGGGCTGCTGGGCACCCCTCTCACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR CCA 90 bp TGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCGCTGCAGAGCTTCTGTaGAGGGCCTGCCTCCACTCC +
Preference number: 2 (lower is better)
Translates to: CPPAPLVPEVSYASPFFSAAELL*RACLHS
Trigger: GGAGTGGAGGCAGGCCCTCCACAGAAGCTCTGCAGC...GCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR CAA 90 bp CATGAGAACAAAAAGCTCTGTTCTTTTTGTCCCTTGGGCCTGGCATaGGCAGTCCTAGCACCACACAGTGGACAGCATGCCCACCAGCCC +
Preference number: 2 (lower is better)
Translates to: HENKKLCSFCPLGLA*AVLAPHSGQHAHQP
Trigger: GGGCTGGTGGGCATGCTGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAGAGCTTTTTGTTCTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR CCA 90 bp TCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACAGGCCCACCAGCCCCATTaGTACCAGAAGTCTCATATG +
Preference number: 2 (lower is better)
Translates to: SFCPLGLALAVLAPHSGQAHQPH*YQKSHM
Trigger: CATATGAGACTTCTGGTACCAATGGGGCTGGTGGGC...CTGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR CAA 90 bp GGCAGTCCTAGCACCACACAGTGGACAGCATGCCCACCAGCCCCATaGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCACCATC +
Preference number: 2 (lower is better)
Translates to: GSPSTTQWTACPPAP*VPEVSYASPFFSTI
Trigger: GATGGTGCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCATGCTGTCCACTGTGTGGTGCTAGGACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR CAA 90 bp AGCAGGGCCAGCCATGAGAACAAAAAGCTCTGTTCTTTTTGTCCCTaGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACAGCAT +
Preference number: 2 (lower is better)
Translates to: SRASHENKKLCSFCP*GLALAVLAPHSGQH
Trigger: ATGCTGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAGAGCTTTTTGTTCTCATGGCTGGCCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR CCA 90 bp CTCTGTTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGCCCACCAGCCCCATTaGTACCAGAAGTCTCATATG +
Preference number: 2 (lower is better)
Translates to: LCSFCPLGLALAVLAPHSAHQPH*YQKSHM
Trigger: CATATGAGACTTCTGGTACCAATGGGGCTGGTGGGC...ACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR CCA 90 bp CAACTCTTCTTTGGGCATGAGACCAGTGGGTTGGAGGATGGGGAGTGTGGGGGTGCTTCATTATCCATTTaGGAGATGAACAGACTGAGG +
Preference number: 2 (lower is better)
Translates to: QLFFGHETSGLEDGECGGASLSI*EMNRLR
Trigger: CCTCAGTCTGTTCATCTCCCAAATGGATAATGAAGC...ACCCCCACACTCCCCATCCTCCAACCCACTGGTCTCATGCCCAAAGAAGAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR TCA 90 bp ACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCAAGGTGTCAGGTATCTaGGCACCTGCATCCATATGC +
Preference number: 2 (lower is better)
Translates to: TFMLAVYMPPIMHPETLTKVSGI*APASIC
Trigger: GCATATGGATGCAGGTGCTCAGATACCTGACACCTT...GGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
3UTR-3UTR CCA 90 bp TTCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTCCAGGGCAGACTCAGTaGCTTCCTATCCAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: FFSTISRRSRSTLFSNSFPGQTQ*LPIQGS
Trigger: AGAGCCCTGGATAGGAAGCCACTGAGTCTGCCCTGG...AAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR GCA 90 bp TTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCTGTCACCAAGTACACATGTaGAGATATAGTTTCCTGTCT +
Preference number: 2 (lower is better)
Translates to: FMLAVYMPPIMHPETLTCHQVHM*RYSFLS
Trigger: AGACAGGAAACTATATCTGCACATGTGTACTTGGTG...ACAGGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
3UTR GCA 72 bp TGTGGGGGTTGGGATGACATGCATTGCCCTGCAGGGTaGCTCGGAGGTAGCAGGGCCAGCCATGAGAACAAA +
Preference number: 3 (lower is better)
Translates to: CGGWDDMHCPAG*LGGSRASHENK
Trigger: TTTGTTCTCATGGCTGGCCCTGCTACCTCCGAGGCACCCTGCAGGGCAATGCATGTCATCCCAACCCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR CAA 90 bp GGGAGTGTGGGGGTTGGGATGACATGCATTGCCCTGCAGGGTGCCTCGGAGGTATGCCCACCAGCCCCATaGGTACCAGAAGTCTCATAT +
Preference number: 3 (lower is better)
Translates to: GSVGVGMTCIALQGASEVCPPAP*VPEVSY
Trigger: ATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCA...TACCTCCGAGGCACCCTGCAGGGCAATGCATGTCATCCCAACCCCCACACTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR GCA 72 bp GGCATTGGCAGTCCTAGCACCACACAGTGGACAGCATaGCCACCAGCCCCATTGGTACCAGAAGTCTCATAT +
Preference number: 3 (lower is better)
Translates to: GIGSPSTTQWTA*PPAPLVPEVSY
Trigger: ATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCATGCTGTCCACTGTGTGGTGCTAGGACTGCCAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR GCA 72 bp TTCCTATCCAGGGCTCTTCCCACAGCTCGTCACCACTaGCCCAACCCAAGGGGCACCTTTATTTACAGAATC +
Preference number: 3 (lower is better)
Translates to: FLSRALPTARHH*PNPRGTFIYRI
Trigger: GATTCTGTAAATAAAGGTGCCCCTTGGGTTGGGGCAGTGGTGACGAGCTGTGGGAAGAGCCCTGGATAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR CCA 72 bp GCACCACACAGTGGACAGCATGCCCACCAGCCCCATTaGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTA +
Preference number: 3 (lower is better)
Translates to: APHSGQHAHQPH*YQKSHMLVLSL
Trigger: TAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCATGCTGTCCACTGTGTGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR-3UTR CAA 90 bp TGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCGGCTTCATTATCCATTaGGGAGATGAACAGACTGAG +
Preference number: 3 (lower is better)
Translates to: CPPAPLVPEVSYASPFFSGFIIH*GDEQTE
Trigger: CTCAGTCTGTTCATCTCCCAAATGGATAATGAAGCC...GCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR GCA 72 bp ATACACTCATGTACACATTTATGCTTGCAGTTTACATaGCCCCAATCATGCACCCTGAAACACTCACCTGTG +
Preference number: 3 (lower is better)
Translates to: IHSCTHLCLQFT*PQSCTLKHSPV
Trigger: CACAGGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR TCA 90 bp TCCGGCCCTAGGCAGAGGGTTCGATACTCCCAGCCTGAGTTGCAGGGCCTGCCCGCACCCACCAGAGGCTaGGGATGCCTGGGGCACAAG +
Preference number: 4 (lower is better)
Translates to: SGPRQRVRYSQPELQGLPAPTRG*GCLGHK
Trigger: CTTGTGCCCCAGGCATCCTCAGCCTCTGGTGGGTGC...GGGCAGGCCCTGCAACTCAGGCTGGGAGTATCGAACCCTCTGCCTAGGGCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TCCGGCCCTAGGCAGAGGGTTCGATACTCCCAGCCTGAGTTGCAGGGCCTGCCCCCAGCCACGGTGCGGTaGTCCACATCCAGCCACTCC +
Preference number: 4 (lower is better)
Translates to: SGPRQRVRYSQPELQGLPPATVR*STSSHS
Trigger: GGAGTGGCTGGATGTGGAGCACCGCACCGTGGCTGG...GGGCAGGCCCTGCAACTCAGGCTGGGAGTATCGAACCCTCTGCCTAGGGCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp GGGAGTGTGGGGGTTGGGATGACATGCATTGCCCTGCAGGGTGCCTCGGAGGTAAGCGGAGGCAGGAGCTaGGCGTGCCATCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GSVGVGMTCIALQGASEVSGGRS*ACHQAP
Trigger: GGGAGCCTGATGGCACGCTCAGCTCCTGCCTCCGCT...TACCTCCGAGGCACCCTGCAGGGCAATGCATGTCATCCCAACCCCCACACTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp GGGAGTGTGGGGGTTGGGATGACATGCATTGCCCTGCAGGGTGCCTCGGAGGTAAATCCTCCCCAACCGTaGGAGGGGTGCCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GSVGVGMTCIALQGASEVNPPQP*EGCPAA
Trigger: GGCTGCTGGGCACCCCTCTCACGGTTGGGGAGGATT...TACCTCCGAGGCACCCTGCAGGGCAATGCATGTCATCCCAACCCCCACACTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CCTATCCAGGGCTCTTCCCACAGCTCGTCACCACTGCCCCAACCCAAGGGGCACCTGAGTTGCAGGGCCTaGCCTTCTGCTCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PIQGSSHSSSPLPQPKGHLSCRA*PSALPA
Trigger: GGCTGGGAGAGCAGAAGGGCAGGCCCTGCAACTCAG...GTGCCCCTTGGGTTGGGGCAGTGGTGACGAGCTGTGGGAAGAGCCCTGGATAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TCCGGCCCTAGGCAGAGGGTTCGATACTCCCAGCCTGAGTTGCAGGGCCTGCCCCCTAGCACCACACAGTaGACAGCATGCCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: SGPRQRVRYSQPELQGLPPSTTQ*TACPPA
Trigger: GGCTGGTGGGCATGCTGTCCACTGTGTGGTGCTAGG...GGGCAGGCCCTGCAACTCAGGCTGGGAGTATCGAACCCTCTGCCTAGGGCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CCTATCCAGGGCTCTTCCCACAGCTCGTCACCACTGCCCCAACCCAAGGGGCACCTGTCCAGAAGGTGCTaGTCAGGACTCCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: PIQGSSHSSSPLPQPKGHLSRRC*SGLQPR
Trigger: CCGTGGCTGGAGTCCTGAGCAGCACCTTCTGGACAG...GTGCCCCTTGGGTTGGGGCAGTGGTGACGAGCTGTGGGAAGAGCCCTGGATAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CCTGCAGGGTGCCTCGGAGGTAGCAGGGCCAGCCATGAGAACAAAAAGCTCTGTGGACTCCAGCCACGGTaGGGTGCTCCACATCCAGCC +
Preference number: 4 (lower is better)
Translates to: PAGCLGGSRASHENKKLCGLQPR*GAPHPA
Trigger: GGCTGGATGTGGAGCACCGCACCGTGGCTGGAGTCC...ACAGAGCTTTTTGTTCTCATGGCTGGCCCTGCTACCTCCGAGGCACCCTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp ACCGTGAGAGGGGTGCCCAGCAGCCCACTGCATTCTGGGAAGTCAACTGTTCCTACACTGGCCGCCCATTaGGCCTGGCACAGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: TVRGVPSSPLHSGKSTVPTLAAH*AWHSGA
Trigger: TGCTCCACTGTGCCAGGCTCAATGGGCGGCCAGTGT...AGGAACAGTTGACTTCCCAGAATGCAGTGGGCTGCTGGGCACCCCTCTCACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp GGGAGTGTGGGGGTTGGGATGACATGCATTGCCCTGCAGGGTGCCTCGGAGGTATCACAGCCTCCTGGCTaGAGCTGTCCTCACACACTG +
Preference number: 4 (lower is better)
Translates to: GSVGVGMTCIALQGASEVSQPPG*SCPHTL
Trigger: CAGTGTGTGAGGACAGCTTCAGCCAGGAGGCTGTGA...TACCTCCGAGGCACCCTGCAGGGCAATGCATGTCATCCCAACCCCCACACTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp CTCTGTTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGTGTCCCGGCTTGCGTaGGGCGGCGTCCTGCGTAGC +
Preference number: 4 (lower is better)
Translates to: LCSFCPLGLALAVLAPHSVSRLA*GGVLRS
Trigger: GCTACGCAGGACGCCGCCTCACGCAAGCCGGGACAC...ACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp ACCGTGAGAGGGGTGCCCAGCAGCCCACTGCATTCTGGGAAGTCAACTGTTCCTCGTGAGGCGGCGTCCTaGGTAGCGCACCGACAAGTA +
Preference number: 4 (lower is better)
Translates to: TVRGVPSSPLHSGKSTVPREAAS*VAHRQV
Trigger: TACTTGTCGGTGCGCTACGCAGGACGCCGCCTCACG...AGGAACAGTTGACTTCCCAGAATGCAGTGGGCTGCTGGGCACCCCTCTCACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACAGAGCAGTGTCCCGGCTTaGGTGAGGCGGCGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: SFCPLGLALAVLAPHSGQSSVPA*VRRRPA
Trigger: CGCAGGACGCCGCCTCACGCAAGCCGGGACACTGCT...CTGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CCTATCCAGGGCTCTTCCCACAGCTCGTCACCACTGCCCCAACCCAAGGGGCACTGCCCAGCAGCCCACTaGATTCTGGGAAGTCAACTG +
Preference number: 4 (lower is better)
Translates to: PIQGSSHSSSPLPQPKGHCPAAH*ILGSQL
Trigger: CAGTTGACTTCCCAGAATGCAGTGGGCTGCTGGGCA...GTGCCCCTTGGGTTGGGGCAGTGGTGACGAGCTGTGGGAAGAGCCCTGGATAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp GGGAGTGTGGGGGTTGGGATGACATGCATTGCCCTGCAGGGTGCCTCGGAGGTAGAGAGCAGGGCACTGTaGCAGGTTCATCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSVGVGMTCIALQGASEVESRAL*QVHPPA
Trigger: AGCTGGAGGATGAACCTGCCACAGTGCCCTGCTCTC...TACCTCCGAGGCACCCTGCAGGGCAATGCATGTCATCCCAACCCCCACACTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TTTTATCAGAGCCCAGGGCAGACTCAGTGGCTTCCTATCCAGGGCTCTTCCCACTGCCTGCCTCGTCTCTaGCAGCAGGAGGGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: FYQSPGQTQWLPIQGSSHCLPRL*QQEGGA
Trigger: GGCACCGCCCTCCTGCTGCCAGAGACGAGGCAGGCA...GTGGGAAGAGCCCTGGATAGGAAGCCACTGAGTCTGCCCTGGGCTCTGATAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TCCGGCCCTAGGCAGAGGGTTCGATACTCCCAGCCTGAGTTGCAGGGCCTGCCCTTTCTCTCCACGTCCTaGATGGTCTCTGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SGPRQRVRYSQPELQGLPFLSTS*MVSGSC
Trigger: ACAGCTGCCAGAGACCATCCAGGACGTGGAGAGAAA...GGGCAGGCCCTGCAACTCAGGCTGGGAGTATCGAACCCTCTGCCTAGGGCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp CCTGCAGGGTGCCTCGGAGGTAGCAGGGCCAGCCATGAGAACAAAAAGCTCTGTACACATCCTGATGGCTaGAGTTGGCAGGGGCACCCG +
Preference number: 4 (lower is better)
Translates to: PAGCLGGSRASHENKKLCTHPDG*SWQGHP
Trigger: CGGGTGCCCCTGCCAACTTCAGCCATCAGGATGTGT...ACAGAGCTTTTTGTTCTCATGGCTGGCCCTGCTACCTCCGAGGCACCCTGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CTGTTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGGACGGAGGCTGCAGATaGCAGGCCCAGCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: LFFLSLGPGIGSPSTTQWDGGCR*QAQHQG
Trigger: ACCCTGGTGCTGGGCCTGGCATCTGCAGCCTCCGTC...CCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TTTTATCAGAGCCCAGGGCAGACTCAGTGGCTTCCTATCCAGGGCTCTTCCCACCCAGCCACGGTGCGGTaGTCCACATCCAGCCACTCC +
Preference number: 4 (lower is better)
Translates to: FYQSPGQTQWLPIQGSSHPATVR*STSSHS
Trigger: GGAGTGGCTGGATGTGGAGCACCGCACCGTGGCTGG...GTGGGAAGAGCCCTGGATAGGAAGCCACTGAGTCTGCCCTGGGCTCTGATAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp AGAGGGGTGCCCAGCAGCCCACTGCATTCTGGGAAGTCAACTGTTCCTAGAAGCGGTCTCTGGCAGCTGTaGCTGCCTCGTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RGVPSSPLHSGKSTVPRSGLWQL*LPRLWQ
Trigger: CTGCCAGAGACGAGGCAGGCACAGCTGCCAGAGACC...GCTTCTAGGAACAGTTGACTTCCCAGAATGCAGTGGGCTGCTGGGCACCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp GGGAGTGTGGGGGTTGGGATGACATGCATTGCCCTGCAGGGTGCCTCGGAGGTATGCTCACCCACCAAATaGTTCAGGTGCAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: GSVGVGMTCIALQGASEVCSPTK*FRCSLP
Trigger: AGGGAGGCTGCACCTGAAGCATTTGGTGGGTGAGCA...TACCTCCGAGGCACCCTGCAGGGCAATGCATGTCATCCCAACCCCCACACTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp ACCGTGAGAGGGGTGCCCAGCAGCCCACTGCATTCTGGGAAGTCAACTGTTCCTACTCCCAGCCTGAGTTaGAGGGCCTGCCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: TVRGVPSSPLHSGKSTVPTPSLS*RACPSA
Trigger: AGCAGAAGGGCAGGCCCTGCAACTCAGGCTGGGAGT...AGGAACAGTTGACTTCCCAGAATGCAGTGGGCTGCTGGGCACCCCTCTCACGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp CTGTTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGGGCTCCCGGGGAAGATaGGCCTCCAGCCACACATCC +
Preference number: 4 (lower is better)
Translates to: LFFLSLGPGIGSPSTTQWGSRGR*ASSHTS
Trigger: GGATGTGTGGCTGGAGGCCCATCTTCCCCGGGAGCC...CCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp CCTATCCAGGGCTCTTCCCACAGCTCGTCACCACTGCCCCAACCCAAGGGGCACAACAACAGCTGTGTCTaGTACACGTTCAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PIQGSSHSSSPLPQPKGHNNSCV*YTFSPS
Trigger: GCTGGGGCTGAACGTGTACCAGACACAGCTGTTGTT...GTGCCCCTTGGGTTGGGGCAGTGGTGACGAGCTGTGGGAAGAGCCCTGGATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TCCGGCCCTAGGCAGAGGGTTCGATACTCCCAGCCTGAGTTGCAGGGCCTGCCCCTTCCTCCTGAAGACTaGTTGGGGCACTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SGPRQRVRYSQPELQGLPLPPED*LGHSFS
Trigger: AGAGAAAGAGTGCCCCAACCAGTCTTCAGGAGGAAG...GGGCAGGCCCTGCAACTCAGGCTGGGAGTATCGAACCCTCTGCCTAGGGCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp AGAGGGGTGCCCAGCAGCCCACTGCATTCTGGGAAGTCAACTGTTCCTAGAAGCGCTGCAGAGCTTCTGTaGAGGGCCTGCCTCCACTCC +
Preference number: 4 (lower is better)
Translates to: RGVPSSPLHSGKSTVPRSAAELL*RACLHS
Trigger: GGAGTGGAGGCAGGCCCTCCACAGAAGCTCTGCAGC...GCTTCTAGGAACAGTTGACTTCCCAGAATGCAGTGGGCTGCTGGGCACCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp TGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCGTGTCCCGGCTTGCGTaGGGCGGCGTCCTGCGTAGC +
Preference number: 4 (lower is better)
Translates to: CPPAPLVPEVSYASPFFSVSRLA*GGVLRS
Trigger: GCTACGCAGGACGCCGCCTCACGCAAGCCGGGACAC...GCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp CAACTCTTCTTTGGGCATGAGACCAGTGGGTTGGAGGATGGGGAGTGTGGGGGTTCGATACTCCCAGCCTaGGTTGCAGGGCCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: QLFFGHETSGLEDGECGGSILPA*VAGPAL
Trigger: AAGGGCAGGCCCTGCAACTCAGGCTGGGAGTATCGA...ACCCCCACACTCCCCATCCTCCAACCCACTGGTCTCATGCCCAAAGAAGAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp CAACTCTTCTTTGGGCATGAGACCAGTGGGTTGGAGGATGGGGAGTGTGGGGGTGTGTGGGGGTTGGGATaGCATGCATTGCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QLFFGHETSGLEDGECGGVWGLG*HALPCR
Trigger: CCTGCAGGGCAATGCATGTCATCCCAACCCCCACAC...ACCCCCACACTCCCCATCCTCCAACCCACTGGTCTCATGCCCAAAGAAGAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TTTTATCAGAGCCCAGGGCAGACTCAGTGGCTTCCTATCCAGGGCTCTTCCCACCGTGAGGCGGCGTCCTaGGTAGCGCACCGACAAGTA +
Preference number: 4 (lower is better)
Translates to: FYQSPGQTQWLPIQGSSHREAAS*VAHRQV
Trigger: TACTTGTCGGTGCGCTACGCAGGACGCCGCCTCACG...GTGGGAAGAGCCCTGGATAGGAAGCCACTGAGTCTGCCCTGGGCTCTGATAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TTTTATCAGAGCCCAGGGCAGACTCAGTGGCTTCCTATCCAGGGCTCTTCCCACGGTCTCTGGCAGCTGTaGCTGCCTCGTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FYQSPGQTQWLPIQGSSHGLWQL*LPRLWQ
Trigger: CTGCCAGAGACGAGGCAGGCACAGCTGCCAGAGACC...GTGGGAAGAGCCCTGGATAGGAAGCCACTGAGTCTGCCCTGGGCTCTGATAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACAGGCCACATTCCGCAGTTaGAAGGGCCCAAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SFCPLGLALAVLAPHSGQATFRS*KGPKPP
Trigger: GGGCGGCTTTGGGCCCTTCCAACTGCGGAATGTGGC...CTGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp CCTGCAGGGTGCCTCGGAGGTAGCAGGGCCAGCCATGAGAACAAAAAGCTCTGTTTGAGCCTGGCACAGTaGAGCAAGTACCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PAGCLGGSRASHENKKLCLSLAQ*SKYLWA
Trigger: GGCCCACAGGTACTTGCTCCACTGTGCCAGGCTCAA...ACAGAGCTTTTTGTTCTCATGGCTGGCCCTGCTACCTCCGAGGCACCCTGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp GGGAGTGTGGGGGTTGGGATGACATGCATTGCCCTGCAGGGTGCCTCGGAGGTACTCCTGAAGACTGGTTaGGGCACTCTTTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GSVGVGMTCIALQGASEVLLKTG*GTLSLH
Trigger: GTGGAGAGAAAGAGTGCCCCAACCAGTCTTCAGGAG...TACCTCCGAGGCACCCTGCAGGGCAATGCATGTCATCCCAACCCCCACACTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp TTTTATCAGAGCCCAGGGCAGACTCAGTGGCTTCCTATCCAGGGCTCTTCCCACGGGCACAAGGCAGGGTaGCAGCTAGCAGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: FYQSPGQTQWLPIQGSSHGHKAG*QLAEAI
Trigger: GATGGCTTCTGCTAGCTGTCACCCTGCCTTGTGCCC...GTGGGAAGAGCCCTGGATAGGAAGCCACTGAGTCTGCCCTGGGCTCTGATAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp ACCTTTATTTACAGAATCCTCCCCAACCGTGAGAGGGGTGCCCAGCAGCCCACTGGGCACAAGGCAGGGTaGCAGCTAGCAGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: TFIYRILPNRERGAQQPTGHKAG*QLAEAI
Trigger: GATGGCTTCTGCTAGCTGTCACCCTGCCTTGTGCCC...AGTGGGCTGCTGGGCACCCCTCTCACGGTTGGGGAGGATTCTGTAAATAAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp ACAGCATGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCGCACCCACCAGAGGCTaGGGATGCCTGGGGCACAAG +
Preference number: 4 (lower is better)
Translates to: TACPPAPLVPEVSYASPFAPTRG*GCLGHK
Trigger: CTTGTGCCCCAGGCATCCTCAGCCTCTGGTGGGTGC...GAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCATGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp ACCTTTATTTACAGAATCCTCCCCAACCGTGAGAGGGGTGCCCAGCAGCCCACTAGCTCCCCACGGCTCTaGCTTTCTTCCCCCAACGTG +
Preference number: 4 (lower is better)
Translates to: TFIYRILPNRERGAQQPTSSPRL*LSSPNV
Trigger: CACGTTGGGGGAAGAAAGGCAGAGCCGTGGGGAGCT...AGTGGGCTGCTGGGCACCCCTCTCACGGTTGGGGAGGATTCTGTAAATAAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TCCGGCCCTAGGCAGAGGGTTCGATACTCCCAGCCTGAGTTGCAGGGCCTGCCCCAGATCCCACTCAGTTaGAATGGTAGAGGAGAATTC +
Preference number: 4 (lower is better)
Translates to: SGPRQRVRYSQPELQGLPQIPLS*NGRGEF
Trigger: GAATTCTCCTCTACCATTGCAACTGAGTGGGATCTG...GGGCAGGCCCTGCAACTCAGGCTGGGAGTATCGAACCCTCTGCCTAGGGCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372589.7
CDS-3UTR GCA 90 bp ACAGCATGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCGACGGAGGCTGCAGATaGCAGGCCCAGCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: TACPPAPLVPEVSYASPFDGGCR*QAQHQG
Trigger: ACCCTGGTGCTGGGCCTGGCATCTGCAGCCTCCGTC...GAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCATGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TTTTATCAGAGCCCAGGGCAGACTCAGTGGCTTCCTATCCAGGGCTCTTCCCACATAGCTGACGGAGGCTaGAGATGCCAGGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: FYQSPGQTQWLPIQGSSHIADGG*RCQAQH
Trigger: GTGCTGGGCCTGGCATCTGCAGCCTCCGTCAGCTAT...GTGGGAAGAGCCCTGGATAGGAAGCCACTGAGTCTGCCCTGGGCTCTGATAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CAACTCTTCTTTGGGCATGAGACCAGTGGGTTGGAGGATGGGGAGTGTGGGGGTGTCGGAGCCGTGGTGTaGGGAACAGGTCTAGGTATG +
Preference number: 4 (lower is better)
Translates to: QLFFGHETSGLEDGECGGVGAVV*GTGLGM
Trigger: CATACCTAGACCTGTTCCGCACACCACGGCTCCGAC...ACCCCCACACTCCCCATCCTCCAACCCACTGGTCTCATGCCCAAAGAAGAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCAGCAGTGTCCCGGCTTaGGTGAGGCGGCGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: CPPAPLVPEVSYASPFFSSSVPA*VRRRPA
Trigger: CGCAGGACGCCGCCTCACGCAAGCCGGGACACTGCT...GCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp ACCGTGAGAGGGGTGCCCAGCAGCCCACTGCATTCTGGGAAGTCAACTGTTCCTCCAGCCAGCTCAAACTaGCCACCACATAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: TVRGVPSSPLHSGKSTVPPASSN*PPHRPL
Trigger: CAAGGGTCTATGTGGTGGGCAGTTTGAGCTGGCTGG...AGGAACAGTTGACTTCCCAGAATGCAGTGGGCTGCTGGGCACCCCTCTCACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp ACAGCATGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCCATTGCCCTGCAGGGTaGCTCGGAGGTAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TACPPAPLVPEVSYASPFHCPAG*LGGSRA
Trigger: GGCCCTGCTACCTCCGAGGCACCCTGCAGGGCAATG...GAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCATGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CTGTTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGGGGGTTGGGATGACATaGATTGCCCTGCAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LFFLSLGPGIGSPSTTQWGVGMT*IALQGA
Trigger: GGCACCCTGCAGGGCAATGCATGTCATCCCAACCCC...CCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACAGCATGCTTGCTCACAGCCTCCTaGCTGAAGCTGTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: LSLGPGIGSPSTTQWTACLLTAS*LKLSSH
Trigger: GTGTGAGGACAGCTTCAGCCAGGAGGCTGTGAGCAA...GCATGCTGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp CTCTGTTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTACACATCCTGATGGCTaGAGTTGGCAGGGGCACCCG +
Preference number: 4 (lower is better)
Translates to: LCSFCPLGLALAVLAPHSTHPDG*SWQGHP
Trigger: CGGGTGCCCCTGCCAACTTCAGCCATCAGGATGTGT...ACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp TTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACAAAAACCAGCCAGGGCTaGGCCAGTAAGGGTGCGGGT +
Preference number: 4 (lower is better)
Translates to: FFLSLGPGIGSPSTTQWTKTSQG*ASKGAG
Trigger: ACCCGCACCCTTACTGGCTCAGCCCTGGCTGGTTTT...TGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp TTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACATCGATACTCCCAGCCTaGGTTGCAGGGCCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: FFLSLGPGIGSPSTTQWTSILPA*VAGPAL
Trigger: AAGGGCAGGCCCTGCAACTCAGGCTGGGAGTATCGA...TGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CAACTCTTCTTTGGGCATGAGACCAGTGGGTTGGAGGATGGGGAGTGTGGGGGTAGCTTTCCCCATCACTaGCAGGACAGTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QLFFGHETSGLEDGECGGSFPHH*QDSAPG
Trigger: TCCTGGAGCACTGTCCTGGCAGTGATGGGGAAAGCT...ACCCCCACACTCCCCATCCTCCAACCCACTGGTCTCATGCCCAAAGAAGAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp AGAGGGGTGCCCAGCAGCCCACTGCATTCTGGGAAGTCAACTGTTCCTAGAAGCTGCCCAGCAGCCCACTaGATTCTGGGAAGTCAACTG +
Preference number: 4 (lower is better)
Translates to: RGVPSSPLHSGKSTVPRSCPAAH*ILGSQL
Trigger: CAGTTGACTTCCCAGAATGCAGTGGGCTGCTGGGCA...GCTTCTAGGAACAGTTGACTTCCCAGAATGCAGTGGGCTGCTGGGCACCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CAACTCTTCTTTGGGCATGAGACCAGTGGGTTGGAGGATGGGGAGTGTGGGGGTACACAGTGGACAGCATaGCCACCAGCCCCATTGGTA +
Preference number: 4 (lower is better)
Translates to: QLFFGHETSGLEDGECGGTQWTA*PPAPLV
Trigger: TACCAATGGGGCTGGTGGGCATGCTGTCCACTGTGT...ACCCCCACACTCCCCATCCTCCAACCCACTGGTCTCATGCCCAAAGAAGAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TTTTATCAGAGCCCAGGGCAGACTCAGTGGCTTCCTATCCAGGGCTCTTCCCACGAGAGCAGGGCACTGTaGCAGGTTCATCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FYQSPGQTQWLPIQGSSHESRAL*QVHPPA
Trigger: AGCTGGAGGATGAACCTGCCACAGTGCCCTGCTCTC...GTGGGAAGAGCCCTGGATAGGAAGCCACTGAGTCTGCCCTGGGCTCTGATAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACAGTCCTGGATGGTCTCTaGCAGCTGTGCCTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: FFLSLGPGIGSPSTTQWTVLDGL*QLCLPR
Trigger: ACGAGGCAGGCACAGCTGCCAGAGACCATCCAGGAC...TGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp ACCGTGAGAGGGGTGCCCAGCAGCCCACTGCATTCTGGGAAGTCAACTGTTCCTTTTCTCTCCACGTCCTaGATGGTCTCTGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TVRGVPSSPLHSGKSTVPFLSTS*MVSGSC
Trigger: ACAGCTGCCAGAGACCATCCAGGACGTGGAGAGAAA...AGGAACAGTTGACTTCCCAGAATGCAGTGGGCTGCTGGGCACCCCTCTCACGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp CTCTGTTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTCCTAGCACCACACAGTaGACAGCATGCCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: LCSFCPLGLALAVLAPHSPSTTQ*TACPPA
Trigger: GGCTGGTGGGCATGCTGTCCACTGTGTGGTGCTAGG...ACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp CCTGCAGGGTGCCTCGGAGGTAGCAGGGCCAGCCATGAGAACAAAAAGCTCTGTGTTCTTTTTGTCCCTTaGGCCTGGCATTGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: PAGCLGGSRASHENKKLCVLFVP*AWHWQS
Trigger: GGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAAC...ACAGAGCTTTTTGTTCTCATGGCTGGCCCTGCTACCTCCGAGGCACCCTGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp TCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACAGGGTAGAGGAGAATTCTaGGTGGTCGTACTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SFCPLGLALAVLAPHSGQGRGEF*VVVLPA
Trigger: GGCTGGGAGTACGACCACTCAGAATTCTCCTCTACC...CTGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp TCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACAGAGTAAGCTTGGGCAGTaGCAGCCACACTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: SFCPLGLALAVLAPHSGQSKLGQ*QPHSIQ
Trigger: CTGGATGGAGTGTGGCTGTCACTGCCCAAGCTTACT...CTGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CTCTGTTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTATGGGCAGGAGGAAGTaGAGTGGTAGCAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: LCSFCPLGLALAVLAPHSMGRRK*SGSSTR
Trigger: CCGAGTGCTGCTACCACTGCACTTCCTCCTGCCCAT...ACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp ACCGTGAGAGGGGTGCCCAGCAGCCCACTGCATTCTGGGAAGTCAACTGTTCCTACCAAATGCTTCAGGTaGAGCCTCCCTCTAGTATCC +
Preference number: 4 (lower is better)
Translates to: TVRGVPSSPLHSGKSTVPTKCFR*SLPLVS
Trigger: GGATACTAGAGGGAGGCTGCACCTGAAGCATTTGGT...AGGAACAGTTGACTTCCCAGAATGCAGTGGGCTGCTGGGCACCCCTCTCACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CAACTCTTCTTTGGGCATGAGACCAGTGGGTTGGAGGATGGGGAGTGTGGGGGTCCTCAAAGCCCATGCTaGTCACCCACCAAATGCTTC +
Preference number: 4 (lower is better)
Translates to: QLFFGHETSGLEDGECGGPQSPC*SPTKCF
Trigger: GAAGCATTTGGTGGGTGAGCAGCATGGGCTTTGAGG...ACCCCCACACTCCCCATCCTCCAACCCACTGGTCTCATGCCCAAAGAAGAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CTGTTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGCTTCTGTGGAGGGCCTaGCTCCACTCCCACTTAGTT +
Preference number: 4 (lower is better)
Translates to: LFFLSLGPGIGSPSTTQWLLWRA*LHSHLV
Trigger: AACTAAGTGGGAGTGGAGGCAGGCCCTCCACAGAAG...CCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TATGGTAGGGCCTCCCAAGAGGCTTCATTATCCATTTGGGAGATGAACAGACTGCATTGCCCTGCAGGGTaGCTCGGAGGTAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: YGRASQEASLSIWEMNRLHCPAG*LGGSRA
Trigger: GGCCCTGCTACCTCCGAGGCACCCTGCAGGGCAATG...CAGTCTGTTCATCTCCCAAATGGATAATGAAGCCTCTTGGGAGGCCCTACCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp ACAGCATGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCGGGGTTGGGATGACATaGATTGCCCTGCAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: TACPPAPLVPEVSYASPFGVGMT*IALQGA
Trigger: GGCACCCTGCAGGGCAATGCATGTCATCCCAACCCC...GAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCATGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACATTTCTTCCCCCAACGTaGTGTTGGGGAGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: FFLSLGPGIGSPSTTQWTFLPPT*CWGEPG
Trigger: CCCAGGCTCTCCCCAACACCACGTTGGGGGAAGAAA...TGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp CACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGTGCCTGCCTCGTCTCTaGCAGCAGGAGGGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: HSCTHLCLQFTCPQSCTLCLPRL*QQEGGA
Trigger: GGCACCGCCCTCCTGCTGCCAGAGACGAGGCAGGCA...CAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR TCA 90 bp ATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCTGTGCAACACATCCTGATGGCTaGAGTTGGCAGGGGCACCCG +
Preference number: 4 (lower is better)
Translates to: MLAVYMPPIMHPETLTCATHPDG*SWQGHP
Trigger: CGGGTGCCCCTGCCAACTTCAGCCATCAGGATGTGT...TGCACAGGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR TCA 90 bp CAACTCTTCTTTGGGCATGAGACCAGTGGGTTGGAGGATGGGGAGTGTGGGGGTCAAACATTACATAGCTaGCGGAGGCTGCAGATGCCA +
Preference number: 4 (lower is better)
Translates to: QLFFGHETSGLEDGECGGQTLHS*RRLQMP
Trigger: TGGCATCTGCAGCCTCCGTCAGCTATGTAATGTTTG...ACCCCCACACTCCCCATCCTCCAACCCACTGGTCTCATGCCCAAAGAAGAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp AGAGGGGTGCCCAGCAGCCCACTGCATTCTGGGAAGTCAACTGTTCCTAGAAGCATAATCAAGGATGGATaGGCAGAGGGAGCGGGTACT +
Preference number: 4 (lower is better)
Translates to: RGVPSSPLHSGKSTVPRSIIKDG*AEGAGT
Trigger: AGTACCCGCTCCCTCTGCTCATCCATCCTTGATTAT...GCTTCTAGGAACAGTTGACTTCCCAGAATGCAGTGGGCTGCTGGGCACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp ACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCCCAGCCACGGTGCGGTaGTCCACATCCAGCCACTCC +
Preference number: 4 (lower is better)
Translates to: TFMLAVYMPPIMHPETLTPATVR*STSSHS
Trigger: GGAGTGGCTGGATGTGGAGCACCGCACCGTGGCTGG...GGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp ACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCGGACTCCAGCCACGGTaGGGTGCTCCACATCCAGCC +
Preference number: 4 (lower is better)
Translates to: TFMLAVYMPPIMHPETLTGLQPR*GAPHPA
Trigger: GGCTGGATGTGGAGCACCGCACCGTGGCTGGAGTCC...GGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp ATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCTGTGCACTGTCCAGAAGGTGCTaGTCAGGACTCCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: MLAVYMPPIMHPETLTCALSRRC*SGLQPR
Trigger: CCGTGGCTGGAGTCCTGAGCAGCACCTTCTGGACAG...TGCACAGGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CCA 90 bp TCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACAGAACAACAGCTGTGTCTaGTACACGTTCAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SFCPLGLALAVLAPHSGQNNSCV*YTFSPS
Trigger: GCTGGGGCTGAACGTGTACCAGACACAGCTGTTGTT...CTGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp CACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGACACTGGCCGCCCATTaGGCCTGGCACAGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: HSCTHLCLQFTCPQSCTLTLAAH*AWHSGA
Trigger: TGCTCCACTGTGCCAGGCTCAATGGGCGGCCAGTGT...CAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR TCA 90 bp GTTCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGGTGTCCCGGCTTGCGTaGGGCGGCGTCCTGCGTAGC +
Preference number: 4 (lower is better)
Translates to: VHTLMYTFMLAVYMPPIMVSRLA*GGVLRS
Trigger: GCTACGCAGGACGCCGCCTCACGCAAGCCGGGACAC...CATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR TCA 90 bp TTTTATCAGAGCCCAGGGCAGACTCAGTGGCTTCCTATCCAGGGCTCTTCCCACCGTAGGGTACAACTCTaGAGTGAACAGGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: FYQSPGQTQWLPIQGSSHRRVQL*SEQVGS
Trigger: ACTGCCTACCTGTTCACTTCAGAGTTGTACCCTACG...GTGGGAAGAGCCCTGGATAGGAAGCCACTGAGTCTGCCCTGGGCTCTGATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp TCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACAGCGTAGGGTACAACTCTaGAGTGAACAGGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SFCPLGLALAVLAPHSGQRRVQL*SEQVGS
Trigger: ACTGCCTACCTGTTCACTTCAGAGTTGTACCCTACG...CTGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCGTCGGAGCCGTGGTGTaGGGAACAGGTCTAGGTATG +
Preference number: 4 (lower is better)
Translates to: CPPAPLVPEVSYASPFFSVGAVV*GTGLGM
Trigger: CATACCTAGACCTGTTCCGCACACCACGGCTCCGAC...GCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp AGCAGAAGCACCTTATTCAGTAACTCATTTGAGCATGGCAACAGATCCTATGGTCGAACGCCAGGGCCGTaGCCAGCAGTGTCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: SRSTLFSNSFEHGNRSYGRTPGP*PAVSRL
Trigger: AAGCCGGGACACTGCTGGGCACGGCCCTGGCGTTCG...ACCATAGGATCTGTTGCCATGCTCAAATGAGTTACTGAATAAGGTGCTTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGTCTGGCAGCTGTGCCTaGCTCGTCTCTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HSCTHLCLQFTCPQSCTLSGSCA*LVSGSR
Trigger: CCTGCTGCCAGAGACGAGGCAGGCACAGCTGCCAGA...CAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp TTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCTGTGGTCTCTGGCAGCTGTaGCTGCCTCGTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FMLAVYMPPIMHPETLTCGLWQL*LPRLWQ
Trigger: CTGCCAGAGACGAGGCAGGCACAGCTGCCAGAGACC...ACAGGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp CTGTTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACCAAATGCTTCAGGTaGAGCCTCCCTCTAGTATCC +
Preference number: 4 (lower is better)
Translates to: LFFLSLGPGIGSPSTTQWTKCFR*SLPLVS
Trigger: GGATACTAGAGGGAGGCTGCACCTGAAGCATTTGGT...CCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp ATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCTGTGCATTTCTTCCCCCAACGTaGTGTTGGGGAGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: MLAVYMPPIMHPETLTCAFLPPT*CWGEPG
Trigger: CCCAGGCTCTCCCCAACACCACGTTGGGGGAAGAAA...TGCACAGGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CCA 90 bp TGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCTTTCTTCCCCCAACGTaGTGTTGGGGAGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: CPPAPLVPEVSYASPFFSFLPPT*CWGEPG
Trigger: CCCAGGCTCTCCCCAACACCACGTTGGGGGAAGAAA...GCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACATGGAGCAAGTACCTGTaGGCCTCTTTCACATGGCCT +
Preference number: 4 (lower is better)
Translates to: FFLSLGPGIGSPSTTQWTWSKYL*ASFTWP
Trigger: AGGCCATGTGAAAGAGGCCCACAGGTACTTGCTCCA...TGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp CACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGGCTGTCCTCACACACTaGCCGCCCATTGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: HSCTHLCLQFTCPQSCTLAVLTH*PPIEPG
Trigger: GCCAGGCTCAATGGGCGGCCAGTGTGTGAGGACAGC...CAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CCA 90 bp TTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACACTCCTGAAGACTGGTTaGGGCACTCTTTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: FFLSLGPGIGSPSTTQWTLLKTG*GTLSLH
Trigger: GTGGAGAGAAAGAGTGCCCCAACCAGTCTTCAGGAG...TGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCCCAGGGCAGACTCAGTaGCTTCCTATCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: CPPAPLVPEVSYASPFFSPGQTQ*LPIQGS
Trigger: AGAGCCCTGGATAGGAAGCCACTGAGTCTGCCCTGG...GCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR CAA 72 bp AAAAAGCTCTGTTCTTTTTGTCCCTTGGGCCTGGCATaGGCAGTCCTAGCACCACACAGTGGACAGCATGCC +
Preference number: 4 (lower is better)
Translates to: KKLCSFCPLGLA*AVLAPHSGQHA
Trigger: GGCATGCTGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAGAGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp TCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCAAGCGGAGGCAGGAGCTaGGCGTGCCATCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SYTHVHIYACSLHAPNHASGGRS*ACHQAP
Trigger: GGGAGCCTGATGGCACGCTCAGCTCCTGCCTCCGCT...TGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR TCA 90 bp ACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCAAAACCAGCCAGGGCTaGGCCAGTAAGGGTGCGGGT +
Preference number: 4 (lower is better)
Translates to: TFMLAVYMPPIMHPETLTKTSQG*ASKGAG
Trigger: ACCCGCACCCTTACTGGCTCAGCCCTGGCTGGTTTT...GGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR TCA 90 bp ATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCTGTGCAAGTAAGCTTGGGCAGTaGCAGCCACACTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: MLAVYMPPIMHPETLTCASKLGQ*QPHSIQ
Trigger: CTGGATGGAGTGTGGCTGTCACTGCCCAAGCTTACT...TGCACAGGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR TCA 90 bp TATGGTAGGGCCTCCCAAGAGGCTTCATTATCCATTTGGGAGATGAACAGACTGGGCATCTCTTCCTCCTaGAGACTGGTTGGGGCACTC +
Preference number: 4 (lower is better)
Translates to: YGRASQEASLSIWEMNRLGISSS*RLVGAL
Trigger: GAGTGCCCCAACCAGTCTTCAGGAGGAAGAGATGCC...CAGTCTGTTCATCTCCCAAATGGATAATGAAGCCTCTTGGGAGGCCCTACCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp AGCAGAAGCACCTTATTCAGTAACTCATTTGAGCATGGCAACAGATCCTATGGTAATCCTCCCCAACCGTaGGAGGGGTGCCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SRSTLFSNSFEHGNRSYGNPPQP*EGCPAA
Trigger: GGCTGCTGGGCACCCCTCTCACGGTTGGGGAGGATT...ACCATAGGATCTGTTGCCATGCTCAAATGAGTTACTGAATAAGGTGCTTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGGGGCAGGGCCAGCAGTaGCACATTCCGCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: HSCTHLCLQFTCPQSCTLGQGQQ*HIPQLE
Trigger: TTCCAACTGCGGAATGTGGCACTGCTGGCCCTGCCC...CAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp CACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGATAGCTGACGGAGGCTaGAGATGCCAGGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: HSCTHLCLQFTCPQSCTLIADGG*RCQAQH
Trigger: GTGCTGGGCCTGGCATCTGCAGCCTCCGTCAGCTAT...CAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp CACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGCCCCTGTCCAGAAGGTaGTGCTCAGGACTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HSCTHLCLQFTCPQSCTLPLSRR*CSGLQP
Trigger: TGGCTGGAGTCCTGAGCAGCACCTTCTGGACAGGGG...CAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp TGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACCGTGAGGCGGCGTCCTaGGTAGCGCACCGACAAGTA +
Preference number: 4 (lower is better)
Translates to: CTHLCLQFTCPQSCTLKHREAAS*VAHRQV
Trigger: TACTTGTCGGTGCGCTACGCAGGACGCCGCCTCACG...GTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp TCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCAAGCAGTGTCCCGGCTTaGGTGAGGCGGCGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: SYTHVHIYACSLHAPNHASSVPA*VRRRPA
Trigger: CGCAGGACGCCGCCTCACGCAAGCCGGGACACTGCT...TGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp GTTCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCGAACGCCAGGGCCGTaGCCAGCAGTGTCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: VHTLMYTFMLAVYMPPIMRTPGP*PAVSRL
Trigger: AAGCCGGGACACTGCTGGGCACGGCCCTGGCGTTCG...CATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp TATGGTAGGGCCTCCCAAGAGGCTTCATTATCCATTTGGGAGATGAACAGACTGTGGGATGACATGCATTaGCCTGCAGGGTGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: YGRASQEASLSIWEMNRLWDDMH*PAGCLG
Trigger: TCCGAGGCACCCTGCAGGGCAATGCATGTCATCCCA...CAGTCTGTTCATCTCCCAAATGGATAATGAAGCCTCTTGGGAGGCCCTACCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp ACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCAGCCACATTCCGCAGTTaGAAGGGCCCAAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: THLCLQFTCPQSCTLKHSATFRS*KGPKPP
Trigger: GGGCGGCTTTGGGCCCTTCCAACTGCGGAATGTGGC...TGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CCA 90 bp TTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGAGCTGCCTGCCTCGTCTCTaGCAGCAGGAGGGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: LAPSLEEAEAPYSVTHLSCLPRL*QQEGGA
Trigger: GGCACCGCCCTCCTGCTGCCAGAGACGAGGCAGGCA...GCTCAAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp ACAGCATGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCGTTCTTTTTGTCCCTTaGGCCTGGCATTGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: TACPPAPLVPEVSYASPFVLFVP*AWHWQS
Trigger: GGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAAC...GAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCATGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TATGGTAGGGCCTCCCAAGAGGCTTCATTATCCATTTGGGAGATGAACAGACTGGGGGAGTGTGGGGGTTaGGATGACATGCATTGCCCT +
Preference number: 4 (lower is better)
Translates to: YGRASQEASLSIWEMNRLGECGG*DDMHCP
Trigger: AGGGCAATGCATGTCATCCCAACCCCCACACTCCCC...CAGTCTGTTCATCTCCCAAATGGATAATGAAGCCTCTTGGGAGGCCCTACCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp TGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACGGGCACAAGGCAGGGTaGCAGCTAGCAGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: CTHLCLQFTCPQSCTLKHGHKAG*QLAEAI
Trigger: GATGGCTTCTGCTAGCTGTCACCCTGCCTTGTGCCC...GTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR TCA 90 bp GTTCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGGCACCCACCAGAGGCTaGGGATGCCTGGGGCACAAG +
Preference number: 4 (lower is better)
Translates to: VHTLMYTFMLAVYMPPIMAPTRG*GCLGHK
Trigger: CTTGTGCCCCAGGCATCCTCAGCCTCTGGTGGGTGC...CATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR TCA 90 bp AGCAGAAGCACCTTATTCAGTAACTCATTTGAGCATGGCAACAGATCCTATGGTCACCACGCAGCACAGTaGGATGTGTCGGAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: SRSTLFSNSFEHGNRSYGHHAAQ*DVSEPW
Trigger: CCACGGCTCCGACACATCTCACTGTGCTGCGTGGTG...ACCATAGGATCTGTTGCCATGCTCAAATGAGTTACTGAATAAGGTGCTTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp ACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCATGGGCAGGAGGAAGTaGAGTGGTAGCAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: TFMLAVYMPPIMHPETLTMGRRK*SGSSTR
Trigger: CCGAGTGCTGCTACCACTGCACTTCCTCCTGCCCAT...GGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp ACAGCATGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCCTGTTCAGACCTTTCTaGTCACACACCAGATCCCAC +
Preference number: 4 (lower is better)
Translates to: TACPPAPLVPEVSYASPFLFRPF*SHTRSH
Trigger: GTGGGATCTGGTGTGTGAGCAGAAAGGTCTGAACAG...GAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCATGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp GTTCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGGACGGAGGCTGCAGATaGCAGGCCCAGCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: VHTLMYTFMLAVYMPPIMDGGCR*QAQHQG
Trigger: ACCCTGGTGCTGGGCCTGGCATCTGCAGCCTCCGTC...CATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp CACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGGTCGGAGCCGTGGTGTaGGGAACAGGTCTAGGTATG +
Preference number: 4 (lower is better)
Translates to: HSCTHLCLQFTCPQSCTLVGAVV*GTGLGM
Trigger: CATACCTAGACCTGTTCCGCACACCACGGCTCCGAC...CAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp CTTTCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATCGAACGCCAGGGCCGTaGCCAGCAGTGTCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: LSLAPSLEEAEAPYSVTHRTPGP*PAVSRL
Trigger: AAGCCGGGACACTGCTGGGCACGGCCCTGGCGTTCG...ATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCTCACTGCCAGGACAGTaGTCCAGGACTTCATATCGG +
Preference number: 4 (lower is better)
Translates to: CPPAPLVPEVSYASPFFSSLPGQ*SRTSYR
Trigger: CCGATATGAAGTCCTGGAGCACTGTCCTGGCAGTGA...GCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TATGGTAGGGCCTCCCAAGAGGCTTCATTATCCATTTGGGAGATGAACAGACTGACACAGTGGACAGCATaGCCACCAGCCCCATTGGTA +
Preference number: 4 (lower is better)
Translates to: YGRASQEASLSIWEMNRLTQWTA*PPAPLV
Trigger: TACCAATGGGGCTGGTGGGCATGCTGTCCACTGTGT...CAGTCTGTTCATCTCCCAAATGGATAATGAAGCCTCTTGGGAGGCCCTACCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CTGTTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGAAATGTTGGCTCCCATaGCTTCAACTCTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LFFLSLGPGIGSPSTTQWKCWLP*LQLFFG
Trigger: CCCAAAGAAGAGTTGAAGGCATGGGAGCCAACATTT...CCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp GTTCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGGGCTCCCGGGGAAGATaGGCCTCCAGCCACACATCC +
Preference number: 4 (lower is better)
Translates to: VHTLMYTFMLAVYMPPIMGSRGR*ASSHTS
Trigger: GGATGTGTGGCTGGAGGCCCATCTTCCCCGGGAGCC...CATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CCA 90 bp ACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCTTGAGCCTGGCACAGTaGAGCAAGTACCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: TFMLAVYMPPIMHPETLTLSLAQ*SKYLWA
Trigger: GGCCCACAGGTACTTGCTCCACTGTGCCAGGCTCAA...GGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CCA 90 bp ACAGCATGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTCTGGACCTGCTTCATaGGCATCTCTTCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: TACPPAPLVPEVSYASPFSGPAS*ASLPPE
Trigger: TTCAGGAGGAAGAGATGCCCATGAAGCAGGTCCAGA...GAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCATGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCGCCCACCAGCCCCATTaGTACCAGAAGTCTCATATG +
Preference number: 4 (lower is better)
Translates to: CPPAPLVPEVSYASPFFSAHQPH*YQKSHM
Trigger: CATATGAGACTTCTGGTACCAATGGGGCTGGTGGGC...GCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp CCTGCAGGGTGCCTCGGAGGTAGCAGGGCCAGCCATGAGAACAAAAAGCTCTGTTCTTCAATAAAATGTTaGCTCCCATGCCTTCAACTC +
Preference number: 4 (lower is better)
Translates to: PAGCLGGSRASHENKKLCSSIKC*LPCLQL
Trigger: GAGTTGAAGGCATGGGAGCCAACATTTTATTGAAGA...ACAGAGCTTTTTGTTCTCATGGCTGGCCCTGCTACCTCCGAGGCACCCTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR CAA 72 bp AGCACCACACAGTGGACAGCATGCCCACCAGCCCCATaGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: STTQWTACPPAP*VPEVSYASPFF
Trigger: AAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCATGCTGTCCACTGTGTGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp AGCAGAAGCACCTTATTCAGTAACTCATTTGAGCATGGCAACAGATCCTATGGTAAAACCAGCCAGGGCTaGGCCAGTAAGGGTGCGGGT +
Preference number: 4 (lower is better)
Translates to: SRSTLFSNSFEHGNRSYGKTSQG*ASKGAG
Trigger: ACCCGCACCCTTACTGGCTCAGCCCTGGCTGGTTTT...ACCATAGGATCTGTTGCCATGCTCAAATGAGTTACTGAATAAGGTGCTTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp CATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCACCATCTCTAGAAACACTGGCCGCCCATTaGGCCTGGCACAGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: HWYQKSHMLVLSLAPSLETLAAH*AWHSGA
Trigger: TGCTCCACTGTGCCAGGCTCAATGGGCGGCCAGTGT...TTCTAGAGATGGTGCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp TCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACACCACGCAGCACAGTaGGATGTGTCGGAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: SYTHVHIYACSLHAPNHAHHAAQ*DVSEPW
Trigger: CCACGGCTCCGACACATCTCACTGTGCTGCGTGGTG...TGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR TCA 90 bp AGCAGAAGCACCTTATTCAGTAACTCATTTGAGCATGGCAACAGATCCTATGGTGTGTGGGGGTTGGGATaGCATGCATTGCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRSTLFSNSFEHGNRSYGVWGLG*HALPCR
Trigger: CCTGCAGGGCAATGCATGTCATCCCAACCCCCACAC...ACCATAGGATCTGTTGCCATGCTCAAATGAGTTACTGAATAAGGTGCTTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp CCTGCAGGGTGCCTCGGAGGTAGCAGGGCCAGCCATGAGAACAAAAAGCTCTGTAAAACTTGTGTTTATTaGATTTCAGCCTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PAGCLGGSRASHENKKLCKTCVY*ISASVA
Trigger: AGCCACAGAGGCTGAAATTCAATAAACACAAGTTTT...ACAGAGCTTTTTGTTCTCATGGCTGGCCCTGCTACCTCCGAGGCACCCTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCCTGTTCAGACCTTTCTaGTCACACACCAGATCCCAC +
Preference number: 4 (lower is better)
Translates to: CPPAPLVPEVSYASPFFSLFRPF*SHTRSH
Trigger: GTGGGATCTGGTGTGTGAGCAGAAAGGTCTGAACAG...GCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp AGCAGAAGCACCTTATTCAGTAACTCATTTGAGCATGGCAACAGATCCTATGGTCCCCTGTCCAGAAGGTaGTGCTCAGGACTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SRSTLFSNSFEHGNRSYGPLSRR*CSGLQP
Trigger: TGGCTGGAGTCCTGAGCAGCACCTTCTGGACAGGGG...ACCATAGGATCTGTTGCCATGCTCAAATGAGTTACTGAATAAGGTGCTTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCACCATCTCTAGAACTGAGTTGCAGGGCCTaGCCTTCTGCTCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: HWYQKSHMLVLSLAPSLELSCRA*PSALPA
Trigger: GGCTGGGAGAGCAGAAGGGCAGGCCCTGCAACTCAG...TTCTAGAGATGGTGCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCCCAACGTGGTGTTaGGGAGAGCCTGGGGATAGG +
Preference number: 4 (lower is better)
Translates to: SYTHVHIYACSLHAPNHAPPTWC*GEPGDR
Trigger: CCTATCCCCAGGCTCTCCCCAACACCACGTTGGGGG...TGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CCA 90 bp CATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCACCATCTCTAGAACCCCCAACGTGGTGTTaGGGAGAGCCTGGGGATAGG +
Preference number: 4 (lower is better)
Translates to: HWYQKSHMLVLSLAPSLEPPTWC*GEPGDR
Trigger: CCTATCCCCAGGCTCTCCCCAACACCACGTTGGGGG...TTCTAGAGATGGTGCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp ACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCAGAGAGCAGGGCACTGTaGCAGGTTCATCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: THLCLQFTCPQSCTLKHSESRAL*QVHPPA
Trigger: AGCTGGAGGATGAACCTGCCACAGTGCCCTGCTCTC...TGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CCA 90 bp TGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCCCACTCCAGCTCCAGTaGCATCACGATGATGGTAAA +
Preference number: 4 (lower is better)
Translates to: CPPAPLVPEVSYASPFFSPLQLQ*HHDDGK
Trigger: TTTACCATCATCGTGATGCCACTGGAGCTGGAGTGG...GCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TATGGTAGGGCCTCCCAAGAGGCTTCATTATCCATTTGGGAGATGAACAGACTGTGGAGCAAGTACCTGTaGGCCTCTTTCACATGGCCT +
Preference number: 4 (lower is better)
Translates to: YGRASQEASLSIWEMNRLWSKYL*ASFTWP
Trigger: AGGCCATGTGAAAGAGGCCCACAGGTACTTGCTCCA...CAGTCTGTTCATCTCCCAAATGGATAATGAAGCCTCTTGGGAGGCCCTACCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGAGCGCTGTCCTCACACACTaGCCGCCCATTGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LAPSLEEAEAPYSVTHLSAVLTH*PPIEPG
Trigger: GCCAGGCTCAATGGGCGGCCAGTGTGTGAGGACAGC...GCTCAAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp CACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGTTGCTCACAGCCTCCTaGCTGAAGCTGTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: HSCTHLCLQFTCPQSCTLLLTAS*LKLSSH
Trigger: GTGTGAGGACAGCTTCAGCCAGGAGGCTGTGAGCAA...CAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CCA 90 bp TGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCCTTCCTCCTGAAGACTaGTTGGGGCACTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: CPPAPLVPEVSYASPFFSLPPED*LGHSFS
Trigger: AGAGAAAGAGTGCCCCAACCAGTCTTCAGGAGGAAG...GCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGAGCGCTGCAGAGCTTCTGTaGAGGGCCTGCCTCCACTCC +
Preference number: 4 (lower is better)
Translates to: LAPSLEEAEAPYSVTHLSAAELL*RACLHS
Trigger: GGAGTGGAGGCAGGCCCTCCACAGAAGCTCTGCAGC...GCTCAAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp ACCTTTATTTACAGAATCCTCCCCAACCGTGAGAGGGGTGCCCAGCAGCCCACTGCTTCATTATCCATTTaGGAGATGAACAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: TFIYRILPNRERGAQQPTASLSI*EMNRLR
Trigger: CCTCAGTCTGTTCATCTCCCAAATGGATAATGAAGC...AGTGGGCTGCTGGGCACCCCTCTCACGGTTGGGGAGGATTCTGTAAATAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
3UTR CAA 72 bp AGCCATGAGAACAAAAAGCTCTGTTCTTTTTGTCCCTaGGGCCTGGCATTGGCAGTCCTAGCACCACACAGT +
Preference number: 4 (lower is better)
Translates to: SHENKKLCSFCP*GLALAVLAPHS
Trigger: ACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAGAGCTTTTTGTTCTCATGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp ACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCAGGTAGAGGAGAATTCTaGGTGGTCGTACTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: THLCLQFTCPQSCTLKHSGRGEF*VVVLPA
Trigger: GGCTGGGAGTACGACCACTCAGAATTCTCCTCTACC...TGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR TCA 90 bp AGCAGAAGCACCTTATTCAGTAACTCATTTGAGCATGGCAACAGATCCTATGGTTCACAGCCTCCTGGCTaGAGCTGTCCTCACACACTG +
Preference number: 4 (lower is better)
Translates to: SRSTLFSNSFEHGNRSYGSQPPG*SCPHTL
Trigger: CAGTGTGTGAGGACAGCTTCAGCCAGGAGGCTGTGA...ACCATAGGATCTGTTGCCATGCTCAAATGAGTTACTGAATAAGGTGCTTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp CTTTCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATCACCACGCAGCACAGTaGGATGTGTCGGAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: LSLAPSLEEAEAPYSVTHHHAAQ*DVSEPW
Trigger: CCACGGCTCCGACACATCTCACTGTGCTGCGTGGTG...ATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp TGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACCCCAATCATGCACCCTaGAACACTCACCTGTGCACG +
Preference number: 4 (lower is better)
Translates to: CTHLCLQFTCPQSCTLKHPNHAP*NTHLCT
Trigger: CGTGCACAGGTGAGTGTTTCAGGGTGCATGATTGGG...GTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR TCA 90 bp AGCAGAAGCACCTTATTCAGTAACTCATTTGAGCATGGCAACAGATCCTATGGTGGCATCTCTTCCTCCTaGAGACTGGTTGGGGCACTC +
Preference number: 4 (lower is better)
Translates to: SRSTLFSNSFEHGNRSYGGISSS*RLVGAL
Trigger: GAGTGCCCCAACCAGTCTTCAGGAGGAAGAGATGCC...ACCATAGGATCTGTTGCCATGCTCAAATGAGTTACTGAATAAGGTGCTTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCACCATCTCTAGAAGGGCAGGGCCAGCAGTaGCACATTCCGCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: HWYQKSHMLVLSLAPSLEGQGQQ*HIPQLE
Trigger: TTCCAACTGCGGAATGTGGCACTGCTGGCCCTGCCC...TTCTAGAGATGGTGCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp GTTCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGAGCTCCCCACGGCTCTaGCTTTCTTCCCCCAACGTG +
Preference number: 4 (lower is better)
Translates to: VHTLMYTFMLAVYMPPIMSSPRL*LSSPNV
Trigger: CACGTTGGGGGAAGAAAGGCAGAGCCGTGGGGAGCT...CATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp TTCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGGACTCCAGCCACGGTaGGGTGCTCCACATCCAGCC +
Preference number: 4 (lower is better)
Translates to: FFSTISRRSRSTLFSNSFGLQPR*GAPHPA
Trigger: GGCTGGATGTGGAGCACCGCACCGTGGCTGGAGTCC...AAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGAGCCTGTCCAGAAGGTGCTaGTCAGGACTCCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: LAPSLEEAEAPYSVTHLSLSRRC*SGLQPR
Trigger: CCGTGGCTGGAGTCCTGAGCAGCACCTTCTGGACAG...GCTCAAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGTCACTGCCAGGACAGTaGTCCAGGACTTCATATCGG +
Preference number: 4 (lower is better)
Translates to: HSCTHLCLQFTCPQSCTLSLPGQ*SRTSYR
Trigger: CCGATATGAAGTCCTGGAGCACTGTCCTGGCAGTGA...CAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp CTTTCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTCTGGCAGCTGTGCCTaGCTCGTCTCTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSLAPSLEEAEAPYSVTHSGSCA*LVSGSR
Trigger: CCTGCTGCCAGAGACGAGGCAGGCACAGCTGCCAGA...ATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCACCATCTCTAGAAACTCCCAGCCTGAGTTaGAGGGCCTGCCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: HWYQKSHMLVLSLAPSLETPSLS*RACPSA
Trigger: AGCAGAAGGGCAGGCCCTGCAACTCAGGCTGGGAGT...TTCTAGAGATGGTGCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp CTTTCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATGCCACATTCCGCAGTTaGAAGGGCCCAAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LSLAPSLEEAEAPYSVTHATFRS*KGPKPP
Trigger: GGGCGGCTTTGGGCCCTTCCAACTGCGGAATGTGGC...ATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGCCCCCAACGTGGTGTTaGGGAGAGCCTGGGGATAGG +
Preference number: 4 (lower is better)
Translates to: SLAPSLEEAEAPYSVTHLPPTWC*GEPGDR
Trigger: CCTATCCCCAGGCTCTCCCCAACACCACGTTGGGGG...CAAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCTGTTGGAGCAAGTACCTGTaGGCCTCTTTCACATGGCCT +
Preference number: 4 (lower is better)
Translates to: FMLAVYMPPIMHPETLTCWSKYL*ASFTWP
Trigger: AGGCCATGTGAAAGAGGCCCACAGGTACTTGCTCCA...ACAGGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CCA 90 bp TTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCTGTAACAACAGCTGTGTCTaGTACACGTTCAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: FMLAVYMPPIMHPETLTCNNSCV*YTFSPS
Trigger: GCTGGGGCTGAACGTGTACCAGACACAGCTGTTGTT...ACAGGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CCA 90 bp GTTCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGGTCCTGGATGGTCTCTaGCAGCTGTGCCTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: VHTLMYTFMLAVYMPPIMVLDGL*QLCLPR
Trigger: ACGAGGCAGGCACAGCTGCCAGAGACCATCCAGGAC...CATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CCA 90 bp TTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGAGCGTCCTGGATGGTCTCTaGCAGCTGTGCCTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: LAPSLEEAEAPYSVTHLSVLDGL*QLCLPR
Trigger: ACGAGGCAGGCACAGCTGCCAGAGACCATCCAGGAC...GCTCAAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp AGCAGAAGCACCTTATTCAGTAACTCATTTGAGCATGGCAACAGATCCTATGGTCCAGGGCAGACTCAGTaGCTTCCTATCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SRSTLFSNSFEHGNRSYGPGQTQ*LPIQGS
Trigger: AGAGCCCTGGATAGGAAGCCACTGAGTCTGCCCTGG...ACCATAGGATCTGTTGCCATGCTCAAATGAGTTACTGAATAAGGTGCTTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACAGCTTCATTATCCATTTaGGAGATGAACAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: FFLSLGPGIGSPSTTQWTASLSI*EMNRLR
Trigger: CCTCAGTCTGTTCATCTCCCAAATGGATAATGAAGC...TGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp AGCAGAAGCACCTTATTCAGTAACTCATTTGAGCATGGCAACAGATCCTATGGTGGTAGAGGAGAATTCTaGGTGGTCGTACTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SRSTLFSNSFEHGNRSYGGRGEF*VVVLPA
Trigger: GGCTGGGAGTACGACCACTCAGAATTCTCCTCTACC...ACCATAGGATCTGTTGCCATGCTCAAATGAGTTACTGAATAAGGTGCTTCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp GTTCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGTCACAGCCTCCTGGCTaGAGCTGTCCTCACACACTG +
Preference number: 4 (lower is better)
Translates to: VHTLMYTFMLAVYMPPIMSQPPG*SCPHTL
Trigger: CAGTGTGTGAGGACAGCTTCAGCCAGGAGGCTGTGA...CATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR TCA 90 bp AGCAGAAGCACCTTATTCAGTAACTCATTTGAGCATGGCAACAGATCCTATGGTAGTAAGCTTGGGCAGTaGCAGCCACACTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: SRSTLFSNSFEHGNRSYGSKLGQ*QPHSIQ
Trigger: CTGGATGGAGTGTGGCTGTCACTGCCCAAGCTTACT...ACCATAGGATCTGTTGCCATGCTCAAATGAGTTACTGAATAAGGTGCTTCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGGGGCAGGGCCAGCAGTaGCACATTCCGCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: SLAPSLEEAEAPYSVTHLGQGQQ*HIPQLE
Trigger: TTCCAACTGCGGAATGTGGCACTGCTGGCCCTGCCC...CAAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGATAGCTGACGGAGGCTaGAGATGCCAGGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SLAPSLEEAEAPYSVTHLIADGG*RCQAQH
Trigger: GTGCTGGGCCTGGCATCTGCAGCCTCCGTCAGCTAT...CAAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CTTTCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATCCCCTGTCCAGAAGGTaGTGCTCAGGACTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LSLAPSLEEAEAPYSVTHPLSRR*CSGLQP
Trigger: TGGCTGGAGTCCTGAGCAGCACCTTCTGGACAGGGG...ATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TTCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTTCTGGCAGCTGTGCCTaGCTCGTCTCTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FFSTISRRSRSTLFSNSFSGSCA*LVSGSR
Trigger: CCTGCTGCCAGAGACGAGGCAGGCACAGCTGCCAGA...AAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp ACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCACAGACACAGTCCTGTaGACACACCTCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: TFMLAVYMPPIMHPETLTTDTVL*THLFLS
Trigger: GGAGAGAAAGAGGTGTGTGCACAGGACTGTGTCTGT...GGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp AGCAGAAGCACCTTATTCAGTAACTCATTTGAGCATGGCAACAGATCCTATGGTTGCTCACCCACCAAATaGTTCAGGTGCAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SRSTLFSNSFEHGNRSYGCSPTK*FRCSLP
Trigger: AGGGAGGCTGCACCTGAAGCATTTGGTGGGTGAGCA...ACCATAGGATCTGTTGCCATGCTCAAATGAGTTACTGAATAAGGTGCTTCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCAAATGTTGGCTCCCATaGCTTCAACTCTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: CPPAPLVPEVSYASPFFSKCWLP*LQLFFG
Trigger: CCCAAAGAAGAGTTGAAGGCATGGGAGCCAACATTT...GCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TTCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGCTGTCCTCACACACTaGCCGCCCATTGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FFSTISRRSRSTLFSNSFAVLTH*PPIEPG
Trigger: GCCAGGCTCAATGGGCGGCCAGTGTGTGAGGACAGC...AAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp AGCAGAAGCACCTTATTCAGTAACTCATTTGAGCATGGCAACAGATCCTATGGTTTGCTCACAGCCTCCTaGCTGAAGCTGTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: SRSTLFSNSFEHGNRSYGLLTAS*LKLSSH
Trigger: GTGTGAGGACAGCTTCAGCCAGGAGGCTGTGAGCAA...ACCATAGGATCTGTTGCCATGCTCAAATGAGTTACTGAATAAGGTGCTTCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp ACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCATTTCTCTCCACGTCCTaGATGGTCTCTGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: THLCLQFTCPQSCTLKHSFLSTS*MVSGSC
Trigger: ACAGCTGCCAGAGACCATCCAGGACGTGGAGAGAAA...TGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CCA 90 bp TTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGAGCGGGGAGTGTGGGGGTTaGGATGACATGCATTGCCCT +
Preference number: 4 (lower is better)
Translates to: LAPSLEEAEAPYSVTHLSGECGG*DDMHCP
Trigger: AGGGCAATGCATGTCATCCCAACCCCCACACTCCCC...GCTCAAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp CTCTGTTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTAAAACTTGTGTTTATTaGATTTCAGCCTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LCSFCPLGLALAVLAPHSKTCVY*ISASVA
Trigger: AGCCACAGAGGCTGAAATTCAATAAACACAAGTTTT...ACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TTCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTAGCTCCCCACGGCTCTaGCTTTCTTCCCCCAACGTG +
Preference number: 4 (lower is better)
Translates to: FFSTISRRSRSTLFSNSFSSPRL*LSSPNV
Trigger: CACGTTGGGGGAAGAAAGGCAGAGCCGTGGGGAGCT...AAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACCTGTTCAGACCTTTCTaGTCACACACCAGATCCCAC +
Preference number: 4 (lower is better)
Translates to: CTHLCLQFTCPQSCTLKHLFRPF*SHTRSH
Trigger: GTGGGATCTGGTGTGTGAGCAGAAAGGTCTGAACAG...GTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp AGCAGAAGCACCTTATTCAGTAACTCATTTGAGCATGGCAACAGATCCTATGGTTCACTGCCAGGACAGTaGTCCAGGACTTCATATCGG +
Preference number: 4 (lower is better)
Translates to: SRSTLFSNSFEHGNRSYGSLPGQ*SRTSYR
Trigger: CCGATATGAAGTCCTGGAGCACTGTCCTGGCAGTGA...ACCATAGGATCTGTTGCCATGCTCAAATGAGTTACTGAATAAGGTGCTTCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCAAGCTTTCCCCATCACTaGCAGGACAGTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SYTHVHIYACSLHAPNHASFPHH*QDSAPG
Trigger: TCCTGGAGCACTGTCCTGGCAGTGATGGGGAAAGCT...TGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp TGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTGCTTGCAGTTTACATaGCCCCAATCATGCACCCTG +
Preference number: 4 (lower is better)
Translates to: CTHLCLQFTCPQSCTLKHCLQFT*PQSCTL
Trigger: CAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCA...GTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp CATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCACCATCTCTAGAACCAGCCAGCTCAAACTaGCCACCACATAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: HWYQKSHMLVLSLAPSLEPASSN*PPHRPL
Trigger: CAAGGGTCTATGTGGTGGGCAGTTTGAGCTGGCTGG...TTCTAGAGATGGTGCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCACCATCTCTAGAACTTCTGTGGAGGGCCTaGCTCCACTCCCACTTAGTT +
Preference number: 4 (lower is better)
Translates to: HWYQKSHMLVLSLAPSLELLWRA*LHSHLV
Trigger: AACTAAGTGGGAGTGGAGGCAGGCCCTCCACAGAAG...TTCTAGAGATGGTGCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGTGGGATGACATGCATTaGCCTGCAGGGTGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: SLAPSLEEAEAPYSVTHLWDDMH*PAGCLG
Trigger: TCCGAGGCACCCTGCAGGGCAATGCATGTCATCCCA...CAAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGTTGAGCCTGGCACAGTaGAGCAAGTACCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLAPSLEEAEAPYSVTHLLSLAQ*SKYLWA
Trigger: GGCCCACAGGTACTTGCTCCACTGTGCCAGGCTCAA...CAAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCTGTCAGATCCCACTCAGTTaGAATGGTAGAGGAGAATTC +
Preference number: 4 (lower is better)
Translates to: FMLAVYMPPIMHPETLTCQIPLS*NGRGEF
Trigger: GAATTCTCCTCTACCATTGCAACTGAGTGGGATCTG...ACAGGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp TCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGAGCTTTCCCCATCACTaGCAGGACAGTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SLAPSLEEAEAPYSVTHLSFPHH*QDSAPG
Trigger: TCCTGGAGCACTGTCCTGGCAGTGATGGGGAAAGCT...CAAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp CACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGGCACCTGCATCCATATaGATGTTATCACACGTACAC +
Preference number: 4 (lower is better)
Translates to: HSCTHLCLQFTCPQSCTLAPASI*MLSHVH
Trigger: GTGTACGTGTGATAACATGCATATGGATGCAGGTGC...CAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp TTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGAGCCCTCAAAGCCCATGCTaGTCACCCACCAAATGCTTC +
Preference number: 4 (lower is better)
Translates to: LAPSLEEAEAPYSVTHLSPQSPC*SPTKCF
Trigger: GAAGCATTTGGTGGGTGAGCAGCATGGGCTTTGAGG...GCTCAAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp AGCAGAAGCACCTTATTCAGTAACTCATTTGAGCATGGCAACAGATCCTATGGTTCTGGACCTGCTTCATaGGCATCTCTTCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: SRSTLFSNSFEHGNRSYGSGPAS*ASLPPE
Trigger: TTCAGGAGGAAGAGATGCCCATGAAGCAGGTCCAGA...ACCATAGGATCTGTTGCCATGCTCAAATGAGTTACTGAATAAGGTGCTTCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CCA 90 bp TTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGAGCGCCCACCAGCCCCATTaGTACCAGAAGTCTCATATG +
Preference number: 4 (lower is better)
Translates to: LAPSLEEAEAPYSVTHLSAHQPH*YQKSHM
Trigger: CATATGAGACTTCTGGTACCAATGGGGCTGGTGGGC...GCTCAAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp TCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACAAACATTACATAGCTaGCGGAGGCTGCAGATGCCA +
Preference number: 4 (lower is better)
Translates to: SYTHVHIYACSLHAPNHAQTLHS*RRLQMP
Trigger: TGGCATCTGCAGCCTCCGTCAGCTATGTAATGTTTG...TGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR TCA 90 bp CATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCACCATCTCTAGAACAAACATTACATAGCTaGCGGAGGCTGCAGATGCCA +
Preference number: 4 (lower is better)
Translates to: HWYQKSHMLVLSLAPSLEQTLHS*RRLQMP
Trigger: TGGCATCTGCAGCCTCCGTCAGCTATGTAATGTTTG...TTCTAGAGATGGTGCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR TCA 90 bp GTTCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCGTAGGGTACAACTCTaGAGTGAACAGGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: VHTLMYTFMLAVYMPPIMRRVQL*SEQVGS
Trigger: ACTGCCTACCTGTTCACTTCAGAGTTGTACCCTACG...CATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR TCA 90 bp GTTCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGAAGGTGTCAGGTATCTaGGCACCTGCATCCATATGC +
Preference number: 4 (lower is better)
Translates to: VHTLMYTFMLAVYMPPIMKVSGI*APASIC
Trigger: GCATATGGATGCAGGTGCTCAGATACCTGACACCTT...CATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR TCA 90 bp TTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGAGCATAATCAAGGATGGATaGGCAGAGGGAGCGGGTACT +
Preference number: 4 (lower is better)
Translates to: LAPSLEEAEAPYSVTHLSIIKDG*AEGAGT
Trigger: AGTACCCGCTCCCTCTGCTCATCCATCCTTGATTAT...GCTCAAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCAACATGCCCCCAATCATaGACCCTGAAACACTCACCT +
Preference number: 4 (lower is better)
Translates to: SYTHVHIYACSLHAPNHATCPQS*TLKHSP
Trigger: AGGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGT...TGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CCA 90 bp GTTCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCCACTCCAGCTCCAGTaGCATCACGATGATGGTAAA +
Preference number: 4 (lower is better)
Translates to: VHTLMYTFMLAVYMPPIMPLQLQ*HHDDGK
Trigger: TTTACCATCATCGTGATGCCACTGGAGCTGGAGTGG...CATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR GCA 90 bp CACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGCACCAAGTACACATGTaGAGATATAGTTTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: HSCTHLCLQFTCPQSCTLHQVHM*RYSFLS
Trigger: AGACAGGAAACTATATCTGCACATGTGTACTTGGTG...CAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CCA 90 bp TTCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTCCACTCCAGCTCCAGTaGCATCACGATGATGGTAAA +
Preference number: 4 (lower is better)
Translates to: FFSTISRRSRSTLFSNSFPLQLQ*HHDDGK
Trigger: TTTACCATCATCGTGATGCCACTGGAGCTGGAGTGG...AAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR GCA 90 bp TCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCAAGGTATCTGAGCACCTaGATCCATATGCATGTTATC +
Preference number: 4 (lower is better)
Translates to: SYTHVHIYACSLHAPNHARYLST*IHMHVI
Trigger: GATAACATGCATATGGATGCAGGTGCTCAGATACCT...TGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CCA 90 bp CTTTCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTCTTCAATAAAATGTTaGCTCCCATGCCTTCAACTC +
Preference number: 4 (lower is better)
Translates to: LSLAPSLEEAEAPYSVTHSSIKC*LPCLQL
Trigger: GAGTTGAAGGCATGGGAGCCAACATTTTATTGAAGA...ATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS GCA 90 bp CAGGGCCGTGCCCAGCAGTGTCCCGGCTTGCGTGAGGCGGCGTCCTaGGTAGCGCACCGACAAGTAGACCAGCAGCTTGGAGGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: QGRAQQCPGLREAAS*VAHRQVDQQLGGQF
Trigger: GAACTGCCCTCCAAGCTGCTGGTCTACTTGTCGGTGCGCTACGCAGGACGCCGCCTCACGCAAGCCGGGACACTGCTGGGCACGGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000436107.1
CDS TCA 90 bp GTGCCATCAGGCTCCCGGGGAAGATGGGCCTCCAGCCACACATCCTaGTGGCTGAAGTTGGCAGGGGCACCCGGCAGGGCACATCGGTGG +
Preference number: 5 (lower is better)
Translates to: VPSGSRGRWASSHTS*WLKLAGAPGRAHRW
Trigger: CCACCGATGTGCCCTGCCGGGTGCCCCTGCCAACTTCAGCCATCAGGATGTGTGGCTGGAGGCCCATCTTCCCCGGGAGCCTGATGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000449231.5
ENST00000498232.1
CDS GCA 90 bp GGTACCCAACCAGTGCCAGCAGCATCACGCCCCCTGTCCAGAAGGTaGTGCTCAGGACTCCAGCCACGGTGCGGTGCTCCACATCCAGCC +
Preference number: 5 (lower is better)
Translates to: GTQPVPAASRPLSRR*CSGLQPRCGAPHPA
Trigger: GGCTGGATGTGGAGCACCGCACCGTGGCTGGAGTCCTGAGCAGCACCTTCTGGACAGGGGGCGTGATGCTGCTGGCACTGGTTGGGTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000451757.5
ENST00000487175.5
ENST00000498232.1
CDS GCA 90 bp CCCCCTGTCCAGAAGGTGCTGCTCAGGACTCCAGCCACGGTGCGGTaGTCCACATCCAGCCACTCCAGCTCTGCCTCACCCAGTGGCATC +
Preference number: 5 (lower is better)
Translates to: PPVQKVLLRTPATVR*STSSHSSSASPSGI
Trigger: GATGCCACTGGGTGAGGCAGAGCTGGAGTGGCTGGATGTGGAGCACCGCACCGTGGCTGGAGTCCTGAGCAGCACCTTCTGGACAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451757.5
ENST00000487175.5
CDS CCA 90 bp GGTAGCAGCACTCGGGGCAGGGCCAGCAGTGCCACATTCCGCAGTTaGAAGGGCCCAAAGCCGCCCACCTGCTCCAGCAGCTCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: GSSTRGRASSATFRS*KGPKPPTCSSSSSK
Trigger: CTTTGAGGAGCTGCTGGAGCAGGTGGGCGGCTTTGGGCCCTTCCAACTGCGGAATGTGGCACTGCTGGCCCTGCCCCGAGTGCTGCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000449231.5
ENST00000498232.1
CDS GCA 90 bp ACCCAACCAGTGCCAGCAGCATCACGCCCCCTGTCCAGAAGGTGCTaGTCAGGACTCCAGCCACGGTGCGGTGCTCCACATCCAGCCACT +
Preference number: 5 (lower is better)
Translates to: TQPVPAASRPLSRRC*SGLQPRCGAPHPAT
Trigger: AGTGGCTGGATGTGGAGCACCGCACCGTGGCTGGAGTCCTGAGCAGCACCTTCTGGACAGGGGGCGTGATGCTGCTGGCACTGGTTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000451757.5
ENST00000487175.5
ENST00000498232.1
CDS GCA 90 bp CCCCCTGTCCAGAAGGTGCTGCTCAGGACTCCAGCCACGGTGCGGTaGTCCACATCCAGCCACTCCAGCTCCAGTGGCATCACGATGATG +
Preference number: 5 (lower is better)
Translates to: PPVQKVLLRTPATVR*STSSHSSSSGITMM
Trigger: CATCATCGTGATGCCACTGGAGCTGGAGTGGCTGGATGTGGAGCACCGCACCGTGGCTGGAGTCCTGAGCAGCACCTTCTGGACAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000498232.1
CDS GCA 90 bp CAGCCTGAGTTGCAGGGCCTGCCCTTCTGCTCTCCCAGCCCCTGCTaGAGAGCTTCTGTGGAGGGCCTGCCTCCACTCCCACTTAGTTCT +
Preference number: 5 (lower is better)
Translates to: QPELQGLPFCSPSPC*RASVEGLPPLPLSS
Trigger: AGAACTAAGTGGGAGTGGAGGCAGGCCCTCCACAGAAGCTCTGCAGCAGGGGCTGGGAGAGCAGAAGGGCAGGCCCTGCAACTCAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS GCA 90 bp CAGTCCTGCAGCCTCAGCTTCTTCCCAAGGAAGGCCTCGACCTGCTaGCTCCCAGGGAGACTGCCTCCACCGACATTCCACCTCCAGATG +
Preference number: 5 (lower is better)
Translates to: QSCSLSFFPRKASTC*LPGRLPPPTFHLQM
Trigger: CATCTGGAGGTGGAATGTCGGTGGAGGCAGTCTCCCTGGGAGGCAGCAGGTCGAGGCCTTCCTTGGGAAGAAGCTGAGGCTGCAGGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449231.5
ENST00000451757.5
ENST00000480882.5
ENST00000498232.1
CDS-3UTR CAA 90 bp TTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACACAGCAGTGTCCCGGCTaGCGTGAGGCGGCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: FFLSLGPGIGSPSTTQWTQQCPG*REAASC
Trigger: GCAGGACGCCGCCTCACGCAAGCCGGGACACTGCTG...TGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS GCA 90 bp GGTGCGGGTGATGGCAAACATTACATAGCTGACGGAGGCTGCAGATaGCAGGCCCAGCACCAGGGTACTCACGTAGGCTACCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GAGDGKHYIADGGCR*QAQHQGTHVGYQQQ
Trigger: CTGCTGCTGGTAGCCTACGTGAGTACCCTGGTGCTGGGCCTGGCATCTGCAGCCTCCGTCAGCTATGTAATGTTTGCCATCACCCGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000449231.5
ENST00000451757.5
ENST00000487175.5
ENST00000498232.1
CDS GCA 90 bp ACCACACCACCACGCAGCACAGTGAGATGTGTCGGAGCCGTGGTGTaGGGAACAGGTCTAGGTATGAAGGTCTTCGGACCACCCGTTCCC +
Preference number: 5 (lower is better)
Translates to: TTPPRSTVRCVGAVV*GTGLGMKVFGPPVP
Trigger: GGGAACGGGTGGTCCGAAGACCTTCATACCTAGACCTGTTCCGCACACCACGGCTCCGACACATCTCACTGTGCTGCGTGGTGGTGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000436107.1
CDS CCA 90 bp AGAATTCTGAGTGGTCGTACTCCCAGCCCTGAGAGCAGGGCACTGTaGCAGGTTCATCCTCCAGCTCCCCACGGCTCTGCCTTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: RILSGRTPSPESRAL*QVHPPAPHGSAFLP
Trigger: GGGAAGAAAGGCAGAGCCGTGGGGAGCTGGAGGATGAACCTGCCACAGTGCCCTGCTCTCAGGGCTGGGAGTACGACCACTCAGAATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000449231.5
ENST00000451757.5
ENST00000480882.5
ENST00000487175.5
ENST00000498232.1
CDS-3UTR CAA 90 bp TTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACATCCCCGGCGGCCACTTaGCTCACAGCCTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: FFLSLGPGIGSPSTTQWTSPAAT*LTASWL
Trigger: CAGCCAGGAGGCTGTGAGCAAAGTGGCCGCCGGGGA...TGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CAA 90 bp GGGAGTGTGGGGGTTGGGATGACATGCATTGCCCTGCAGGGTGCCTCGGAGGTACCTCCTGAAGACTGGTaGGGGCACTCTTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: GSVGVGMTCIALQGASEVPPEDW*GHSFSP
Trigger: TGGAGAGAAAGAGTGCCCCAACCAGTCTTCAGGAGG...TACCTCCGAGGCACCCTGCAGGGCAATGCATGTCATCCCAACCCCCACACTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CAA 90 bp CAACTCTTCTTTGGGCATGAGACCAGTGGGTTGGAGGATGGGGAGTGTGGGGGTCCCTTGGGCCTGGCATaGGCAGTCCTAGCACCACAC +
Preference number: 5 (lower is better)
Translates to: QLFFGHETSGLEDGECGGPLGLA*AVLAPH
Trigger: GTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGG...ACCCCCACACTCCCCATCCTCCAACCCACTGGTCTCATGCCCAAAGAAGAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS GCA 90 bp TTCACGCCAGCTTGGGGAATAGGAAACTTTGTCCCTCCCCAGTCCTaGAGCCTCAGCTTCTTCCCAAGGAAGGCCTCGACCTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: FTPAWGIGNFVPPQS*SLSFFPRKASTCCL
Trigger: GAGGCAGCAGGTCGAGGCCTTCCTTGGGAAGAAGCTGAGGCTGCAGGACTGGGGAGGGACAAAGTTTCCTATTCCCCAAGCTGGCGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000449231.5
ENST00000451757.5
ENST00000480882.5
ENST00000498232.1
CDS CCA 90 bp CTGAAGCTGTCCTCACACACTGGCCGCCCATTGAGCCTGGCACAGTaGAGCAAGTACCTGTGGGCCTCTTTCACATGGCCTTGGGTCAGA +
Preference number: 5 (lower is better)
Translates to: LKLSSHTGRPLSLAQ*SKYLWASFTWPWVR
Trigger: TCTGACCCAAGGCCATGTGAAAGAGGCCCACAGGTACTTGCTCCACTGTGCCAGGCTCAATGGGCGGCCAGTGTGTGAGGACAGCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000487175.5
CDS CCA 90 bp TACACAGACACAGTCCTGTGCACACACCTCTTTCTCTCCACGTCCTaGATGGTCTCTGGCAGCTGTGCCTGCCTCGTCTCTGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: YTDTVLCTHLFLSTS*MVSGSCACLVSGSR
Trigger: CCTGCTGCCAGAGACGAGGCAGGCACAGCTGCCAGAGACCATCCAGGACGTGGAGAGAAAGAGGTGTGTGCACAGGACTGTGTCTGTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CAA 90 bp ATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCTGTGCACAGCAGTGTCCCGGCTaGCGTGAGGCGGCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: MLAVYMPPIMHPETLTCAQQCPG*REAASC
Trigger: GCAGGACGCCGCCTCACGCAAGCCGGGACACTGCTG...TGCACAGGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CAA 90 bp GGGAGTGTGGGGGTTGGGATGACATGCATTGCCCTGCAGGGTGCCTCGGAGGTATGTTCTTTTTGTCCCTaGGGCCTGGCATTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: GSVGVGMTCIALQGASEVCSFCP*GLALAV
Trigger: GACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACA...TACCTCCGAGGCACCCTGCAGGGCAATGCATGTCATCCCAACCCCCACACTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CAA 90 bp TCCGGCCCTAGGCAGAGGGTTCGATACTCCCAGCCTGAGTTGCAGGGCCTGCCCAAAGCTCTGTTCTTTTaGTCCCTTGGGCCTGGCATT +
Preference number: 5 (lower is better)
Translates to: SGPRQRVRYSQPELQGLPKALFF*SLGPGI
Trigger: AATGCCAGGCCCAAGGGACAAAAAGAACAGAGCTTT...GGGCAGGCCCTGCAACTCAGGCTGGGAGTATCGAACCCTCTGCCTAGGGCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS TCA 90 bp CACCAGATCCCACTGGGACTCAGTTGCAATGGTAGAGGAGAATTCTaGGTGGTCGTACTCCCAGCCCTGAGAGCAGGGCACTGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: HQIPLGLSCNGRGEF*VVVLPALRAGHCGR
Trigger: CCTGCCACAGTGCCCTGCTCTCAGGGCTGGGAGTACGACCACTCAGAATTCTCCTCTACCATTGCAACTGAGTCCCAGTGGGATCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000487175.5
CDS GCA 90 bp AGTAAGGGTGCGGGTGATGGCAAACATTACATAGCTGACGGAGGCTaGAGATGCCAGGCCCAGCACCAGGGTACTCACGTAGGCTACCAG +
Preference number: 5 (lower is better)
Translates to: SKGAGDGKHYIADGG*RCQAQHQGTHVGYQ
Trigger: CTGGTAGCCTACGTGAGTACCCTGGTGCTGGGCCTGGCATCTGCAGCCTCCGTCAGCTATGTAATGTTTGCCATCACCCGCACCCTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000449231.5
ENST00000451757.5
ENST00000487175.5
ENST00000498232.1
CDS GCA 90 bp CTAGGTATGAAGGTCTTCGGACCACCCGTTCCCCGGCGGCCACTTTaGTCACAGCCTGGTAGGGAAGGAGGTGAGGTTGTAACATCAGAG +
Preference number: 5 (lower is better)
Translates to: LGMKVFGPPVPRRPL*SQPGREGGEVVTSE
Trigger: CTCTGATGTTACAACCTCACCTCCTTCCCTACCAGGCTGTGAGCAAAGTGGCCGCCGGGGAACGGGTGGTCCGAAGACCTTCATACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436107.1
CDS-3UTR CAA 90 bp ATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGAAACACTCACCTGTGCATCCCCGGCGGCCACTTaGCTCACAGCCTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: MLAVYMPPIMHPETLTCASPAAT*LTASWL
Trigger: CAGCCAGGAGGCTGTGAGCAAAGTGGCCGCCGGGGA...TGCACAGGTGAGTGTTTCAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CAA 90 bp TATGGTAGGGCCTCCCAAGAGGCTTCATTATCCATTTGGGAGATGAACAGACTGCAGCAGTGTCCCGGCTaGCGTGAGGCGGCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: YGRASQEASLSIWEMNRLQQCPG*REAASC
Trigger: GCAGGACGCCGCCTCACGCAAGCCGGGACACTGCTG...CAGTCTGTTCATCTCCCAAATGGATAATGAAGCCTCTTGGGAGGCCCTACCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS TCA 90 bp CTCACACACCAGATCCCACTCAGTTGCAATGGTAGAGGAGAATTCTaGGTGGTCGTACTCCCAGCCCTGAGAGCAGGGCACTGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: LTHQIPLSCNGRGEF*VVVLPALRAGHCGR
Trigger: CCTGCCACAGTGCCCTGCTCTCAGGGCTGGGAGTACGACCACTCAGAATTCTCCTCTACCATTGCAACTGAGTGGGATCTGGTGTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372574.7
ENST00000372589.7
CDS-3UTR CAA 90 bp TTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGACAGCATGCTGCCCACCAGCCCCATaGGTACCAGAAGTCTCATAT +
Preference number: 5 (lower is better)
Translates to: LSLGPGIGSPSTTQWTACCPPAP*VPEVSY
Trigger: ATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCA...GCATGCTGTCCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS TCA 90 bp GTAAATACCGACCTGGGACTCAGTTGCAATGGTAGAGGAGAATTCTaGGTGGTCGTACTCCCAGCCCTGAGAGCAGGGCACTGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: VNTDLGLSCNGRGEF*VVVLPALRAGHCGR
Trigger: CCTGCCACAGTGCCCTGCTCTCAGGGCTGGGAGTACGACCACTCAGAATTCTCCTCTACCATTGCAACTGAGTCCCAGGTCGGTATTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449231.5
ENST00000451757.5
ENST00000480882.5
ENST00000498232.1
CDS GCA 90 bp GACGCAGCTCTGTTCAGACCTTTCTGCTCACACACCAGATCCCACTaGAAGGACAGGCAGAAAGGGACCTCCTATGAACATCAGCCCCTC +
Preference number: 5 (lower is better)
Translates to: DAALFRPFCSHTRSH*KDRQKGTSYEHQPL
Trigger: GAGGGGCTGATGTTCATAGGAGGTCCCTTTCTGCCTGTCCTTGCAGTGGGATCTGGTGTGTGAGCAGAAAGGTCTGAACAGAGCTGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480882.5
ENST00000498232.1
CDS-3UTR CAA 90 bp TCCGGCCCTAGGCAGAGGGTTCGATACTCCCAGCCTGAGTTGCAGGGCCTGCCCTTCTTCAATAAAATGTaGGCTCCCATGCCTTCAACT +
Preference number: 5 (lower is better)
Translates to: SGPRQRVRYSQPELQGLPFFNKM*APMPST
Trigger: AGTTGAAGGCATGGGAGCCAACATTTTATTGAAGAA...GGGCAGGCCCTGCAACTCAGGCTGGGAGTATCGAACCCTCTGCCTAGGGCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS TCA 90 bp CTCCAGCTCCAGTGGCATCACGATGATGGTAAAACCAGCCAGGGCTaGGCCAGTAAGGGTGCGGGTGATGGCAAACATTACATAGCTGAC +
Preference number: 5 (lower is better)
Translates to: LQLQWHHDDGKTSQG*ASKGAGDGKHYIAD
Trigger: GTCAGCTATGTAATGTTTGCCATCACCCGCACCCTTACTGGCTCAGCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGGAGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000498232.1
CDS TCA 90 bp TGCCTCACCCAGTGGCATCACGATGATGGTAAAACCAGCCAGGGCTaGGCCAGTAAGGGTGCGGGTGATGGCAAACATTACATAGCTGAC +
Preference number: 5 (lower is better)
Translates to: CLTQWHHDDGKTSQG*ASKGAGDGKHYIAD
Trigger: GTCAGCTATGTAATGTTTGCCATCACCCGCACCCTTACTGGCTCAGCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGGGTGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451757.5
ENST00000487175.5
CDS-3UTR CAA 90 bp CTGTTCTTTTTGTCCCTTGGGCCTGGCATTGGCAGTCCTAGCACCACACAGTGGTGTTCTTTTTGTCCCTaGGGCCTGGCATTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: LFFLSLGPGIGSPSTTQWCSFCP*GLALAV
Trigger: GACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACA...CCACTGTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGGACAAAAAGAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS GCA 90 bp ACACCGGCGAAGAAGAAAGTGGACGCAGCTCTGTTCAGACCTTTCTaGTCACACACCAGATCCCACTGGGACTCAGTTGCAATGGTAGAG +
Preference number: 5 (lower is better)
Translates to: TPAKKKVDAALFRPF*SHTRSHWDSVAMVE
Trigger: CTCTACCATTGCAACTGAGTCCCAGTGGGATCTGGTGTGTGAGCAGAAAGGTCTGAACAGAGCTGCGTCCACTTTCTTCTTCGCCGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000487175.5
CDS GCA 90 bp ACCCTGGAGCCTTCTGAGGCGAACTCTGCCATTCTGGTACCTCCATaGCAGATAATAAACCTCCCAACGATTCACGCCAGCTTGGGGAAT +
Preference number: 5 (lower is better)
Translates to: TLEPSEANSAILVPP*QIINLPTIHASLGN
Trigger: ATTCCCCAAGCTGGCGTGAATCGTTGGGAGGTTTATTATCTGGCATGGAGGTACCAGAATGGCAGAGTTCGCCTCAGAAGGCTCCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480882.5
ENST00000498232.1
CDS-3UTR CAA 90 bp CAACTCTTCTTTGGGCATGAGACCAGTGGGTTGGAGGATGGGGAGTGTGGGGGTAAAGCTCTGTTCTTTTaGTCCCTTGGGCCTGGCATT +
Preference number: 5 (lower is better)
Translates to: QLFFGHETSGLEDGECGGKALFF*SLGPGI
Trigger: AATGCCAGGCCCAAGGGACAAAAAGAACAGAGCTTT...ACCCCCACACTCCCCATCCTCCAACCCACTGGTCTCATGCCCAAAGAAGAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CAA 90 bp GTTCATACACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACACTGGCCGCCCATaGAGCCTGGCACAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: VHTLMYTFMLAVYMPPIMHTGRP*SLAQWS
Trigger: GCTCCACTGTGCCAGGCTCAATGGGCGGCCAGTGTG...CATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTGTATGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CAA 90 bp CATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCACCATCTCTAGAACACACTGGCCGCCCATaGAGCCTGGCACAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: HWYQKSHMLVLSLAPSLEHTGRP*SLAQWS
Trigger: GCTCCACTGTGCCAGGCTCAATGGGCGGCCAGTGTG...TTCTAGAGATGGTGCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CAA 90 bp TTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGAGCCCCTTGGGCCTGGCATaGGCAGTCCTAGCACCACAC +
Preference number: 5 (lower is better)
Translates to: LAPSLEEAEAPYSVTHLSPLGLA*AVLAPH
Trigger: GTGTGGTGCTAGGACTGCCAATGCCAGGCCCAAGGG...GCTCAAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CAA 90 bp TTCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTCACACTGGCCGCCCATaGAGCCTGGCACAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: FFSTISRRSRSTLFSNSFHTGRP*SLAQWS
Trigger: GCTCCACTGTGCCAGGCTCAATGGGCGGCCAGTGTG...AAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CAA 90 bp ACAGCATGCCCACCAGCCCCATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCGGCTTCATTATCCATTaGGGAGATGAACAGACTGAG +
Preference number: 5 (lower is better)
Translates to: TACPPAPLVPEVSYASPFGFIIH*GDEQTE
Trigger: CTCAGTCTGTTCATCTCCCAAATGGATAATGAAGCC...GAAAGGACTAGCATATGAGACTTCTGGTACCAATGGGGCTGGTGGGCATGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CAA 90 bp TTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTGAGCCCTCCTGAAGACTGGTaGGGGCACTCTTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LAPSLEEAEAPYSVTHLSPPEDW*GHSFSP
Trigger: TGGAGAGAAAGAGTGCCCCAACCAGTCTTCAGGAGG...GCTCAAATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS TCA 90 bp TGTGCAGATATAGTTTCCTGTCTGAATCCTAAGGTGTCAGGTATCTaGGCACCTGCATCCATATGCATGTTATCACACGTACACAGACAC +
Preference number: 5 (lower is better)
Translates to: CADIVSCLNPKVSGI*APASICMLSHVHRH
Trigger: GTGTCTGTGTACGTGTGATAACATGCATATGGATGCAGGTGCTCAGATACCTGACACCTTAGGATTCAGACAGGAAACTATATCTGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CAA 90 bp CACTCATGTACACATTTATGCTTGCAGTTTACATGCCCCCAATCATGCACCCTGTGTACACATTTATGCTaGCAGTTTACATGCCCCCAA +
Preference number: 5 (lower is better)
Translates to: HSCTHLCLQFTCPQSCTLCTHLC*QFTCPQ
Trigger: TTGGGGGCATGTAAACTGCAAGCATAAATGTGTACA...CAGGGTGCATGATTGGGGGCATGTAAACTGCAAGCATAAATGTGTACATGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS-3UTR CAA 90 bp CATTGGTACCAGAAGTCTCATATGCTAGTCCTTTCTTTAGCACCATCTCTAGAAGGCTTCATTATCCATTaGGGAGATGAACAGACTGAG +
Preference number: 5 (lower is better)
Translates to: HWYQKSHMLVLSLAPSLEGFIIH*GDEQTE
Trigger: CTCAGTCTGTTCATCTCCCAAATGGATAATGAAGCC...TTCTAGAGATGGTGCTAAAGAAAGGACTAGCATATGAGACTTCTGGTACCAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS-3UTR CAA 90 bp CTTTCTTTAGCACCATCTCTAGAAGAAGCAGAAGCACCTTATTCAGTAACTCATTTCTTCAATAAAATGTaGGCTCCCATGCCTTCAACT +
Preference number: 5 (lower is better)
Translates to: LSLAPSLEEAEAPYSVTHFFNKM*APMPST
Trigger: AGTTGAAGGCATGGGAGCCAACATTTTATTGAAGAA...ATGAGTTACTGAATAAGGTGCTTCTGCTTCTTCTAGAGATGGTGCTAAAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS CAA 72 bp GCCGAACGCCAGGGCCGTGCCCAGCAGTGTCCCGGCTaGCGTGAGGCGGCGTCCTGCGTAGCGCACCGACAA +
Preference number: 6 (lower is better)
Translates to: AERQGRAQQCPG*REAASCVAHRQ
Trigger: TTGTCGGTGCGCTACGCAGGACGCCGCCTCACGCAAGCCGGGACACTGCTGGGCACGGCCCTGGCGTTCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000436107.1
CDS CCA 72 bp CTGGATGGTCTCTGGCAGCTGTGCCTGCCTCGTCTCTaGCAGCAGGAGGGCGGTGCCGGCAGCCAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: LDGLWQLCLPRL*QQEGGAGSQQG
Trigger: GCCCTGCTGGCTGCCGGCACCGCCCTCCTGCTGCCAGAGACGAGGCAGGCACAGCTGCCAGAGACCATCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
CDS TCA 72 bp ACGCCAGGGCCGTGCCCAGCAGTGTCCCGGCTTGCGTaGGGCGGCGTCCTGCGTAGCGCACCGACAAGTAGA +
Preference number: 6 (lower is better)
Translates to: TPGPCPAVSRLA*GGVLRSAPTSR
Trigger: TCTACTTGTCGGTGCGCTACGCAGGACGCCGCCTCACGCAAGCCGGGACACTGCTGGGCACGGCCCTGGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000436107.1
CDS CAA 90 bp CAGTCTAGTGCCGAACGCCAGGGCCGTGCCCAGCAGTGTCCCGGCTaGCGTGAGGCGGCGTCCTGCGTAGCGCACCGACAAGTAGACCAG +
Preference number: 6 (lower is better)
Translates to: QSSAERQGRAQQCPG*REAASCVAHRQVDQ
Trigger: CTGGTCTACTTGTCGGTGCGCTACGCAGGACGCCGCCTCACGCAAGCCGGGACACTGCTGGGCACGGCCCTGGCGTTCGGCACTAGACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000436107.1
CDS TCA 72 bp GGCTCCCGGGGAAGATGGGCCTCCAGCCACACATCCTaGTGGCTGAAGTTGGCAGGGGCACCCGGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: GSRGRWASSHTS*WLKLAGAPGRA
Trigger: TGCCCTGCCGGGTGCCCCTGCCAACTTCAGCCATCAGGATGTGTGGCTGGAGGCCCATCTTCCCCGGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000449231.5
ENST00000498232.1
CDS CCA 72 bp ACTCGGGGCAGGGCCAGCAGTGCCACATTCCGCAGTTaGAAGGGCCCAAAGCCGCCCACCTGCTCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: TRGRASSATFRS*KGPKPPTCSSS
Trigger: GCTGCTGGAGCAGGTGGGCGGCTTTGGGCCCTTCCAACTGCGGAATGTGGCACTGCTGGCCCTGCCCCGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000449231.5
ENST00000498232.1
CDS GCA 72 bp CCAGTGCCAGCAGCATCACGCCCCCTGTCCAGAAGGTaGTGCTCAGGACTCCAGCCACGGTGCGGTGCTCCA +
Preference number: 6 (lower is better)
Translates to: PVPAASRPLSRR*CSGLQPRCGAP
Trigger: TGGAGCACCGCACCGTGGCTGGAGTCCTGAGCAGCACCTTCTGGACAGGGGGCGTGATGCTGCTGGCACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000451757.5
ENST00000487175.5
ENST00000498232.1
CDS GCA 72 bp GCCCAGCAGTGTCCCGGCTTGCGTGAGGCGGCGTCCTaGGTAGCGCACCGACAAGTAGACCAGCAGCTTGGA +
Preference number: 6 (lower is better)
Translates to: AQQCPGLREAAS*VAHRQVDQQLG
Trigger: TCCAAGCTGCTGGTCTACTTGTCGGTGCGCTACGCAGGACGCCGCCTCACGCAAGCCGGGACACTGCTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000436107.1
CDS GCA 72 bp GTGCCAGCAGCATCACGCCCCCTGTCCAGAAGGTGCTaGTCAGGACTCCAGCCACGGTGCGGTGCTCCACAT +
Preference number: 6 (lower is better)
Translates to: VPAASRPLSRRC*SGLQPRCGAPH
Trigger: ATGTGGAGCACCGCACCGTGGCTGGAGTCCTGAGCAGCACCTTCTGGACAGGGGGCGTGATGCTGCTGGCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000451757.5
ENST00000487175.5
ENST00000498232.1
CDS GCA 72 bp CAGAAGGTGCTGCTCAGGACTCCAGCCACGGTGCGGTaGTCCACATCCAGCCACTCCAGCTCTGCCTCACCC +
Preference number: 6 (lower is better)
Translates to: QKVLLRTPATVR*STSSHSSSASP
Trigger: GGGTGAGGCAGAGCTGGAGTGGCTGGATGTGGAGCACCGCACCGTGGCTGGAGTCCTGAGCAGCACCTTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451757.5
ENST00000487175.5
CDS CCA 72 bp AGTGGTCGTACTCCCAGCCCTGAGAGCAGGGCACTGTaGCAGGTTCATCCTCCAGCTCCCCACGGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: SGRTPSPESRAL*QVHPPAPHGSA
Trigger: GGCAGAGCCGTGGGGAGCTGGAGGATGAACCTGCCACAGTGCCCTGCTCTCAGGGCTGGGAGTACGACCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000449231.5
ENST00000451757.5
ENST00000480882.5
ENST00000487175.5
ENST00000498232.1
CDS GCA 72 bp CGCCCACCTGCTCCAGCAGCTCCTCAAAGCCCATGCTaGTCACCCACCAAATGCTTCAGGTGCAGCCTCCCT +
Preference number: 6 (lower is better)
Translates to: RPPAPAAPQSPC*SPTKCFRCSLP
Trigger: AGGGAGGCTGCACCTGAAGCATTTGGTGGGTGAGCAGCATGGGCTTTGAGGAGCTGCTGGAGCAGGTGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372585.10
ENST00000372589.7
ENST00000449231.5
ENST00000498232.1
CDS CAA 72 bp TCCTGGCTGAAGCTGTCCTCACACACTGGCCGCCCATaGAGCCTGGCACAGTGGAGCAAGTACCTGTGGGCC +
Preference number: 6 (lower is better)
Translates to: SWLKLSSHTGRP*SLAQWSKYLWA
Trigger: GGCCCACAGGTACTTGCTCCACTGTGCCAGGCTCAATGGGCGGCCAGTGTGTGAGGACAGCTTCAGCCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000487175.5
CDS GCA 72 bp AAGGTCTTCGGACCACCCGTTCCCCGGCGGCCACTTTaGTCACAGCCTGGTAGGGAAGGAGGTGAGGTTGTA +
Preference number: 6 (lower is better)
Translates to: KVFGPPVPRRPL*SQPGREGGEVV
Trigger: TACAACCTCACCTCCTTCCCTACCAGGCTGTGAGCAAAGTGGCCGCCGGGGAACGGGTGGTCCGAAGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436107.1
CDS CCA 72 bp GTCCTGCGTAGCGCACCGACAAGTAGACCAGCAGCTTaGAGGGCAGTTCCACAGCCCCGAACAACAGCTGTG +
Preference number: 6 (lower is better)
Translates to: VLRSAPTSRPAA*RAVPQPRTTAV
Trigger: CACAGCTGTTGTTCGGGGCTGTGGAACTGCCCTCCAAGCTGCTGGTCTACTTGTCGGTGCGCTACGCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000436107.1
CDS TCA 72 bp GAAGTTCACTCCGAACCACACCACCACGCAGCACAGTaGGATGTGTCGGAGCCGTGGTGTGCGGAACAGGTC +
Preference number: 6 (lower is better)
Translates to: EVHSEPHHHAAQ*DVSEPWCAEQV
Trigger: GACCTGTTCCGCACACCACGGCTCCGACACATCTCACTGTGCTGCGTGGTGGTGTGGTTCGGAGTGAACTTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000436107.1
CDS GCA 72 bp CAAGGAAGGCCTCGACCTGCTGCCTCCCAGGGAGACTaGCTCCACCGACATTCCACCTCCAGATGGATTATG +
Preference number: 6 (lower is better)
Translates to: QGRPRPAASQGD*LHRHSTSRWIM
Trigger: CATAATCCATCTGGAGGTGGAATGTCGGTGGAGGCAGTCTCCCTGGGAGGCAGCAGGTCGAGGCCTTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449231.5
ENST00000451757.5
ENST00000480882.5
ENST00000498232.1
CDS CCA 72 bp TCCTCACACACTGGCCGCCCATTGAGCCTGGCACAGTaGAGCAAGTACCTGTGGGCCTCTTTCACATGGCCT +
Preference number: 6 (lower is better)
Translates to: SSHTGRPLSLAQ*SKYLWASFTWP
Trigger: AGGCCATGTGAAAGAGGCCCACAGGTACTTGCTCCACTGTGCCAGGCTCAATGGGCGGCCAGTGTGTGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000487175.5
CDS CCA 72 bp ACAGTCCTGTGCACACACCTCTTTCTCTCCACGTCCTaGATGGTCTCTGGCAGCTGTGCCTGCCTCGTCTCT +
Preference number: 6 (lower is better)
Translates to: TVLCTHLFLSTS*MVSGSCACLVS
Trigger: AGAGACGAGGCAGGCACAGCTGCCAGAGACCATCCAGGACGTGGAGAGAAAGAGGTGTGTGCACAGGACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372574.7
CDS TCA 72 bp CCACTGGGACTCAGTTGCAATGGTAGAGGAGAATTCTaGGTGGTCGTACTCCCAGCCCTGAGAGCAGGGCAC +
Preference number: 6 (lower is better)
Translates to: PLGLSCNGRGEF*VVVLPALRAGH
Trigger: GTGCCCTGCTCTCAGGGCTGGGAGTACGACCACTCAGAATTCTCCTCTACCATTGCAACTGAGTCCCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000487175.5
CDS TCA 72 bp GACCTGGGACTCAGTTGCAATGGTAGAGGAGAATTCTaGGTGGTCGTACTCCCAGCCCTGAGAGCAGGGCAC +
Preference number: 6 (lower is better)
Translates to: DLGLSCNGRGEF*VVVLPALRAGH
Trigger: GTGCCCTGCTCTCAGGGCTGGGAGTACGACCACTCAGAATTCTCCTCTACCATTGCAACTGAGTCCCAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449231.5
ENST00000451757.5
ENST00000480882.5
ENST00000498232.1
CDS GCA 72 bp GATGGCAAACATTACATAGCTGACGGAGGCTGCAGATaGCAGGCCCAGCACCAGGGTACTCACGTAGGCTAC +
Preference number: 6 (lower is better)
Translates to: DGKHYIADGGCR*QAQHQGTHVGY
Trigger: GTAGCCTACGTGAGTACCCTGGTGCTGGGCCTGGCATCTGCAGCCTCCGTCAGCTATGTAATGTTTGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000449231.5
ENST00000451757.5
ENST00000487175.5
ENST00000498232.1
CDS CCA 72 bp CTGCCTCCACTCCCACTTAGTTCTGGACCTGCTTCATaGGCATCTCTTCCTCCTGAAGACTGGTTGGGGCAC +
Preference number: 6 (lower is better)
Translates to: LPPLPLSSGPAS*ASLPPEDWLGH
Trigger: GTGCCCCAACCAGTCTTCAGGAGGAAGAGATGCCCATGAAGCAGGTCCAGAACTAAGTGGGAGTGGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000372589.7
CDS TCA 72 bp CAGATCCCACTCAGTTGCAATGGTAGAGGAGAATTCTaGGTGGTCGTACTCCCAGCCCTGAGAGCAGGGCAC +
Preference number: 6 (lower is better)
Translates to: QIPLSCNGRGEF*VVVLPALRAGH
Trigger: GTGCCCTGCTCTCAGGGCTGGGAGTACGACCACTCAGAATTCTCCTCTACCATTGCAACTGAGTGGGATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372574.7
ENST00000372589.7
CDS CAA 90 bp CCCACTCCATGCCAGATAATAAACCTCCCAACGATTCACGCCAGCTaGGGGAATAGGAAACTTTGTCCCTCCCCAGTCCTGCAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: PTPCQIINLPTIHAS*GNRKLCPSPVLQPQ
Trigger: CTGAGGCTGCAGGACTGGGGAGGGACAAAGTTTCCTATTCCCCAAGCTGGCGTGAATCGTTGGGAGGTTTATTATCTGGCATGGAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449231.5
ENST00000451757.5
CDS TCA 72 bp CAGTGGCATCACGATGATGGTAAAACCAGCCAGGGCTaGGCCAGTAAGGGTGCGGGTGATGGCAAACATTAC +
Preference number: 6 (lower is better)
Translates to: QWHHDDGKTSQG*ASKGAGDGKHY
Trigger: GTAATGTTTGCCATCACCCGCACCCTTACTGGCTCAGCCCTGGCTGGTTTTACCATCATCGTGATGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000449231.5
ENST00000451757.5
ENST00000487175.5
ENST00000498232.1
CDS TCA 72 bp CATCCCTGTCTGTCTGAGCACCGTAGGGTACAACTCTaGAGTGAACAGGTAGGCAGTGGTGAAGGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: HPCLSEHRRVQL*SEQVGSGEGSF
Trigger: GAAGCTGCCTTCACCACTGCCTACCTGTTCACTTCAGAGTTGTACCCTACGGTGCTCAGACAGACAGGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000436107.1
CDS CAA 90 bp GTACCTCCATGCCAGATAATAAACCTCCCAACGATTCACGCCAGCTaGGGGAATAGGAAACTTTGTCCCTCCCCAGTCCTGCAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: VPPCQIINLPTIHAS*GNRKLCPSPVLQPQ
Trigger: CTGAGGCTGCAGGACTGGGGAGGGACAAAGTTTCCTATTCCCCAAGCTGGCGTGAATCGTTGGGAGGTTTATTATCTGGCATGGAGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480882.5
ENST00000498232.1
CDS GCA 72 bp GGTGAAGGCAGCTTCAGAAAAAGCTTTCCCCATCACTaGCAGGACAGTGCTCCAGGACTTCATATCGGAGGA +
Preference number: 6 (lower is better)
Translates to: GEGSFRKSFPHH*QDSAPGLHIGG
Trigger: TCCTCCGATATGAAGTCCTGGAGCACTGTCCTGGCAGTGATGGGGAAAGCTTTTTCTGAAGCTGCCTTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372574.7
ENST00000372585.10
ENST00000372589.7
ENST00000436107.1
CDS GCA 72 bp CCTTCTGAGGCGAACTCTGCCATTCTGGTACCTCCATaGCAGATAATAAACCTCCCAACGATTCACGCCAGC +
Preference number: 6 (lower is better)
Translates to: PSEANSAILVPP*QIINLPTIHAS
Trigger: GCTGGCGTGAATCGTTGGGAGGTTTATTATCTGGCATGGAGGTACCAGAATGGCAGAGTTCGCCTCAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480882.5
ENST00000498232.1
CDS GCA 72 bp AAGAAGAAAGTGGACGCAGCTCTGTTCAGACCTTTCTaGTCACACACCAGATCCCACTGGGACTCAGTTGCA +
Preference number: 6 (lower is better)
Translates to: KKKVDAALFRPF*SHTRSHWDSVA
Trigger: TGCAACTGAGTCCCAGTGGGATCTGGTGTGTGAGCAGAAAGGTCTGAACAGAGCTGCGTCCACTTTCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372585.10
ENST00000487175.5
CDS GCA 72 bp CTGTTCAGACCTTTCTGCTCACACACCAGATCCCACTaGAAGGACAGGCAGAAAGGGACCTCCTATGAACAT +
Preference number: 6 (lower is better)
Translates to: LFRPFCSHTRSH*KDRQKGTSYEH
Trigger: ATGTTCATAGGAGGTCCCTTTCTGCCTGTCCTTGCAGTGGGATCTGGTGTGTGAGCAGAAAGGTCTGAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480882.5
ENST00000498232.1
CDS CAA 72 bp TGCCAGATAATAAACCTCCCAACGATTCACGCCAGCTaGGGGAATAGGAAACTTTGTCCCTCCCCAGTCCTG +
Preference number: 6 (lower is better)
Translates to: CQIINLPTIHAS*GNRKLCPSPVL
Trigger: CAGGACTGGGGAGGGACAAAGTTTCCTATTCCCCAAGCTGGCGTGAATCGTTGGGAGGTTTATTATCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000449231.5
ENST00000451757.5
ENST00000480882.5
ENST00000498232.1
CDS GCA 72 bp AAGAAGAAAGTGGACGCAGCTCTGTTCAGACCTTTCTaGTCACACACCAGATCCCACTCAGTTGCAATGGTA +
Preference number: 6 (lower is better)
Translates to: KKKVDAALFRPF*SHTRSHSVAMV
Trigger: TACCATTGCAACTGAGTGGGATCTGGTGTGTGAGCAGAAAGGTCTGAACAGAGCTGCGTCCACTTTCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372574.7
ENST00000372589.7
CDS GCA 72 bp AAGAAGAAAGTGGACGCAGCTCTGTTCAGACCTTTCTaGTCACACACCAGATCCCACTCCATGCCAGATAAT +
Preference number: 6 (lower is better)
Translates to: KKKVDAALFRPF*SHTRSHSMPDN
Trigger: ATTATCTGGCATGGAGTGGGATCTGGTGTGTGAGCAGAAAGGTCTGAACAGAGCTGCGTCCACTTTCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449231.5
ENST00000451757.5
CDS TCA 72 bp ATAGTTTCCTGTCTGAATCCTAAGGTGTCAGGTATCTaGGCACCTGCATCCATATGCATGTTATCACACGTA +
Preference number: 6 (lower is better)
Translates to: IVSCLNPKVSGI*APASICMLSHV
Trigger: TACGTGTGATAACATGCATATGGATGCAGGTGCTCAGATACCTGACACCTTAGGATTCAGACAGGAAACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372574.7