RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC22A5 (Homo sapiens)

Ensembl gene IDs: ENSG00000197375

Ensembl transcript IDs: ENST00000245407.8, ENST00000435065.6, ENST00000437841.6, ENST00000447841.5, ENST00000448810.5, ENST00000461013.5, ENST00000475308.1, ENST00000479605.5

Found 366 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTaGACAAGCTGGCCATTTCTGGCAAGACAGTCTTTCCTCTTCAGT +
Preference number: 1 (lower is better)
Translates to: EDKQQRPFVTEGLGV*TSWPFLARQSFLFS
Trigger: ACTGAAGAGGAAAGACTGTCTTGCCAGAAATGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
3UTR CCA 90 bp CTTTTGTCACTGAAGGACTCGGAGTCTGCACAAGCTGGCCATTTCTaGCAAGACAGTCTTTCCTCTTCAGTTTCTCCCTTACTGGAAGCG +
Preference number: 1 (lower is better)
Translates to: LLSLKDSESAQAGHF*QDSLSSSVSPLLEA
Trigger: CGCTTCCAGTAAGGGAGAAACTGAAGAGGAAAGACTGTCTTGCCAGAAATGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
3UTR CCA 90 bp CAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAAGCTaGCCATTTCTGGCAAGACAGTCTTTCCTCTTCAGTTTCTCCCTT +
Preference number: 1 (lower is better)
Translates to: QQRPFVTEGLGVCTS*PFLARQSFLFSFSL
Trigger: AAGGGAGAAACTGAAGAGGAAAGACTGTCTTGCCAGAAATGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
3UTR CCA 90 bp GTGACCATCCGGATATTCCAGGTTCGAAGCAGATCCAGAATGTTGTaGGACTGCTGCTTCTTGGAACTTAGGTCTTGTAACTCACTCGGG +
Preference number: 1 (lower is better)
Translates to: VTIRIFQVRSRSRML*DCCFLELRSCNSLG
Trigger: CCCGAGTGAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGAATATCCGGATGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
3UTR GCA 90 bp ATCCGGATATTCCAGGTTCGAAGCAGATCCAGAATGTTGTGGGACTaGTGCTTCTTGGAACTTAGGTCTTGTAACTCACTCGGGTCAAAG +
Preference number: 1 (lower is better)
Translates to: IRIFQVRSRSRMLWD*CFLELRSCNSLGSK
Trigger: CTTTGACCCGAGTGAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGAATATCCGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
3UTR GCA 90 bp CGGATATTCCAGGTTCGAAGCAGATCCAGAATGTTGTGGGACTGCTaGTTCTTGGAACTTAGGTCTTGTAACTCACTCGGGTCAAAGATA +
Preference number: 1 (lower is better)
Translates to: RIFQVRSRSRMLWDC*FLELRSCNSLGSKI
Trigger: TATCTTTGACCCGAGTGAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGAATATCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
3UTR TCA 90 bp ATGCTGAGTGGTCTTAAGAGCTCACACATCAGTGCACTTTGCTGGTaGTCTGCATCTGCTCATTCTGCTCCATCTTCATTACCTTTCACT +
Preference number: 1 (lower is better)
Translates to: MLSGLKSSHISALCW*SASAHSAPSSLPFT
Trigger: AGTGAAAGGTAATGAAGATGGAGCAGAATGAGCAGATGCAGATCACCAGCAAAGTGCACTGATGTGTGAGCTCTTAAGACCACTCAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
3UTR TCA 90 bp CTCCTGCCCTGGGGAAGCAATGATCCAGTTAATGTCCTCTGTAACTaGGAAAAGGTAAGAATCAAACTCCTTGTGCAATTACTTCCTTTT +
Preference number: 1 (lower is better)
Translates to: LLPWGSNDPVNVLCN*EKVRIKLLVQLLPF
Trigger: AAAAGGAAGTAATTGCACAAGGAGTTTGATTCTTACCTTTTCTCAGTTACAGAGGACATTAACTGGATCATTGCTTCCCCAGGGCAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000245407.8
3UTR-3UTR TCA 90 bp GCCCAGGCGGGATGCTGTGGAGCTGACTCCCACACCCATGTTTCTCACCACTGTGGGATGCTGTGGAGCTaGCTCCCACACCCATGTTTC +
Preference number: 2 (lower is better)
Translates to: AQAGCCGADSHTHVSHHCGMLWS*LPHPCF
Trigger: GAAACATGGGTGTGGGAGTCAGCTCCACAGCATCCC...ACAGTGGTGAGAAACATGGGTGTGGGAGTCAGCTCCACAGCATCCCGCCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
3UTR-3UTR GCA 90 bp GTGTGGGTGCCCATCCAGGAGCAAGTCAGACACAGGTCAAGAGGACAAACAGCAGCTGCCCAGGCGGGATaGTGTGGAGCTGACTCCCAC +
Preference number: 2 (lower is better)
Translates to: VWVPIQEQVRHRSRGQTAAAQAG*CGADSH
Trigger: GTGGGAGTCAGCTCCACAGCATCCCGCCTGGGCAGC...TGCTGTTTGTCCTCTTGACCTGTGTCTGACTTGCTCCTGGATGGGCACCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447841.5
3UTR-3UTR GCA 90 bp TCAATGGTGTCTGGGAGTGGGGTACCGAAGCTCTCTGGGAGAAACAAGGTGAGGAGGGAGACAGGATGCTaGCCAGGCGGGATGCTGTGG +
Preference number: 2 (lower is better)
Translates to: SMVSGSGVPKLSGRNKVRRETGC*PGGMLW
Trigger: CCACAGCATCCCGCCTGGGCAGCATCCTGTCTCCCT...CCTCACCTTGTTTCTCCCAGAGAGCTTCGGTACCCCACTCCCAGACACCATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
3UTR-3UTR CCA 90 bp AGTGGGGTACCGAAGCTCTCTGGGAGAAACAAGGTGAGGATGGCTGTCAGGATGCCAGGAAGAGGGCAGTaGCCATGGAATAGCGCCGGG +
Preference number: 2 (lower is better)
Translates to: SGVPKLSGRNKVRMAVRMPGRGQ*PWNSAG
Trigger: CCCGGCGCTATTCCATGGCCACTGCCCTCTTCCTGG...CATCCTGACAGCCATCCTCACCTTGTTTCTCCCAGAGAGCTTCGGTACCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448810.5
3UTR-3UTR GCA 90 bp TCAATGGTGTCTGGGAGTGGGGTACCGAAGCTCTCTGGGAGAAACAAGGTGAGGAGTAGGGAGACAGGATaGTGCCCAGGCGGGATGCTG +
Preference number: 2 (lower is better)
Translates to: SMVSGSGVPKLSGRNKVRSRETG*CPGGML
Trigger: CAGCATCCCGCCTGGGCAGCATCCTGTCTCCCTACT...CCTCACCTTGTTTCTCCCAGAGAGCTTCGGTACCCCACTCCCAGACACCATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
3UTR-3UTR TCA 90 bp GCAGGAAGCGGTCGTAGGCACCAAGGTAAACGAAGTAGGGAGACAGGATGCTGCTGGAAAAGGCAGCCGTaGCTCCAAACTTGCCCACCA +
Preference number: 2 (lower is better)
Translates to: AGSGRRHQGKRSRETGCCWKRQP*LQTCPP
Trigger: TGGTGGGCAAGTTTGGAGTCACGGCTGCCTTTTCCA...GCAGCATCCTGTCTCCCTACTTCGTTTACCTTGGTGCCTACGACCGCTTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
3UTR-3UTR TCA 90 bp TGGTCAATGGTGTCTGGGAGTGGGGTACCGAAGCTCTCTGGGAGAAACAAGGTGGGGATGCTGTGGAGCTaGCTCCCACACCCATGTTTC +
Preference number: 2 (lower is better)
Translates to: WSMVSGSGVPKLSGRNKVGMLWS*LPHPCF
Trigger: GAAACATGGGTGTGGGAGTCAGCTCCACAGCATCCC...CACCTTGTTTCTCCCAGAGAGCTTCGGTACCCCACTCCCAGACACCATTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
3UTR-3UTR CCA 90 bp GTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGCCTCTTGCGCTCTCCTGCCCTaGGGAAGCAATGATCCAGTT +
Preference number: 2 (lower is better)
Translates to: VAPVSLEEGGALGPYVASCALLP*GSNDPV
Trigger: AACTGGATCATTGCTTCCCCAGGGCAGGAGAGCGCA...AGAGGCTACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
3UTR-3UTR TCA 90 bp TCTGTAGGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTTGGAAAAGGCAGCCGTaGCTCCAAACTTGCCCACCA +
Preference number: 2 (lower is better)
Translates to: SVGSPSVPRGRWCSRAICWKRQP*LQTCPP
Trigger: TGGTGGGCAAGTTTGGAGTCACGGCTGCCTTTTCCA...ACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACCTACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447841.5
3UTR-3UTR TCA 90 bp GAGAATGTAGGGCAGGAAGCGGTCGTAGGCACCAAGGTAAACGAAGTAGGGAGAGGGGTACCAGCTGCATaGAGAGAAGGACACTGCCAC +
Preference number: 2 (lower is better)
Translates to: ENVGQEAVVGTKVNEVGRGVPAA*REGHCH
Trigger: GTGGCAGTGTCCTTCTCTTCATGCAGCTGGTACCCC...TCTCCCTACTTCGTTTACCTTGGTGCCTACGACCGCTTCCTGCCCTACATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448810.5
3UTR-3UTR GCA 90 bp CTAGGGCCATATGTAGCCTCTGAGTGTGGGTGCCCATCCAGGAGCAAGTCAGACGAAGGACTCGGAGTCTaGACAAGCTGGCCATTTCTG +
Preference number: 2 (lower is better)
Translates to: LGPYVASECGCPSRSKSDEGLGV*TSWPFL
Trigger: CAGAAATGGCCAGCTTGTGCAGACTCCGAGTCCTTC...GTCTGACTTGCTCCTGGATGGGCACCCACACTCAGAGGCTACATATGGCCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
3UTR-3UTR TCA 90 bp CAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAAGCTGGCCATTTGCCATATGTAGCCTCTaGGTGTGGGTGCCCATCCAG +
Preference number: 2 (lower is better)
Translates to: QQRPFVTEGLGVCTSWPFAICSL*VWVPIQ
Trigger: CTGGATGGGCACCCACACTCAGAGGCTACATATGGC...AAATGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
3UTR-3UTR CCA 90 bp AGTGGGGTACCGAAGCTCTCTGGGAGAAACAAGGTGAGGATGGCTGTCAGGATGGTCCCTAGAGGAAGGTaGTGCTCTAGGGCCATATGT +
Preference number: 2 (lower is better)
Translates to: SGVPKLSGRNKVRMAVRMVPRGR*CSRAIC
Trigger: ACATATGGCCCTAGAGCACCACCTTCCTCTAGGGAC...CATCCTGACAGCCATCCTCACCTTGTTTCTCCCAGAGAGCTTCGGTACCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447841.5
3UTR-3UTR TCA 90 bp GTGCTAGAGGCTAGGGCTGGTAAGGCCTTGCACCAGTGGCAGCTGCAGACAATTATGGAGCATTTATTATaGGCCTGGACAAGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: VLEARAGKALHQWQLQTIMEHLL*AWTSPV
Trigger: CACTGGGCTTGTCCAGGCTCATAATAAATGCTCCAT...AATTGTCTGCAGCTGCCACTGGTGCAAGGCCTTACCAGCCCTAGCCTCTAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
3UTR-3UTR CCA 90 bp AATGGTGTCTGGGAGTGGGGTACCGAAGCTCTCTGGGAGAAACAAGGTGAGGATGGAGTCTGCACAAGCTaGCCATTTCTGGCAAGACAG +
Preference number: 2 (lower is better)
Translates to: NGVWEWGTEALWEKQGEDGVCTS*PFLARQ
Trigger: CTGTCTTGCCAGAAATGGCCAGCTTGTGCAGACTCC...ATCCTCACCTTGTTTCTCCCAGAGAGCTTCGGTACCCCACTCCCAGACACCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447841.5
3UTR-3UTR CCA 90 bp TGGTCAATGGTGTCTGGGAGTGGGGTACCGAAGCTCTCTGGGAGAAACAAGGTGTGTTTCTCACCACTGTaGGATACAGCTCGGCTGTGT +
Preference number: 2 (lower is better)
Translates to: WSMVSGSGVPKLSGRNKVCFSPL*DTARLC
Trigger: ACACAGCCGAGCTGTATCCCACAGTGGTGAGAAACA...CACCTTGTTTCTCCCAGAGAGCTTCGGTACCCCACTCCCAGACACCATTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
3UTR CAA 90 bp TCACTCGGGTCAAAGATAGTGGAAGGCACAACAATCCCATTGGCTTaGGCAGCCTTGCGGATGATCACCTCTGCCTCTTCAAATCGTCCC +
Preference number: 2 (lower is better)
Translates to: SLGSKIVEGTTIPLA*AALRMITSASSNRP
Trigger: GGGACGATTTGAAGAGGCAGAGGTGATCATCCGCAAGGCTGCCAAAGCCAATGGGATTGTTGTGCCTTCCACTATCTTTGACCCGAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
3UTR-3UTR GCA 90 bp GGTGACCATCCGGATATTCCAGGTTCGAAGCAGATCCAGAATGTTGTGGGACTGGCGGATGATCACCTCTaGCTCTTCAAATCGTCCCTG +
Preference number: 2 (lower is better)
Translates to: GDHPDIPGSKQIQNVVGLADDHL*LFKSSL
Trigger: CAGGGACGATTTGAAGAGGCAGAGGTGATCATCCGC...CAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGAATATCCGGATGGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
3UTR-3UTR TCA 90 bp GTGCTAGAGGCTAGGGCTGGTAAGGCCTTGCACCAGTGGCAGCTGCAGACAATTACAAGCCCAGTGCTTTaGTCAGATGTAAACAAGTCT +
Preference number: 2 (lower is better)
Translates to: VLEARAGKALHQWQLQTITSPVL*SDVNKS
Trigger: AGACTTGTTTACATCTGATCAAAGCACTGGGCTTGT...AATTGTCTGCAGCTGCCACTGGTGCAAGGCCTTACCAGCCCTAGCCTCTAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
3UTR-3UTR CCA 90 bp TCCCATGAGAATGTAGGGCAGGAAGCGGTCGTAGGCACCAAGGTAAACGAAGTATGTTTCTCACCACTGTaGGATACAGCTCGGCTGTGT +
Preference number: 2 (lower is better)
Translates to: SHENVGQEAVVGTKVNEVCFSPL*DTARLC
Trigger: ACACAGCCGAGCTGTATCCCACAGTGGTGAGAAACA...TACTTCGTTTACCTTGGTGCCTACGACCGCTTCCTGCCCTACATTCTCATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
3UTR-3UTR CCA 90 bp GCAGGAAGCGGTCGTAGGCACCAAGGTAAACGAAGTAGGGAGACAGGATGCTGCCAAATAATACAAGTCTaGGGGTACCAGCTGCATGAA +
Preference number: 2 (lower is better)
Translates to: AGSGRRHQGKRSRETGCCQIIQV*GYQLHE
Trigger: TTCATGCAGCTGGTACCCCCAGACTTGTATTATTTG...GCAGCATCCTGTCTCCCTACTTCGTTTACCTTGGTGCCTACGACCGCTTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448810.5
3UTR CAA 90 bp TTTTTGGCACTTAGAGAAGTGCTAGAGGCTAGGGCTGGTAAGGCCTaGCACCAGTGGCAGCTGCAGACAATTGCCAGAGTGATTCTGTTT +
Preference number: 2 (lower is better)
Translates to: FLALREVLEARAGKA*HQWQLQTIARVILF
Trigger: AAACAGAATCACTCTGGCAATTGTCTGCAGCTGCCACTGGTGCAAGGCCTTACCAGCCCTAGCCTCTAGCACTTCTCTAAGTGCCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000245407.8
3UTR-3UTR TCA 90 bp AAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAAAAGGCCTTTTGTCACTaGAGGACTCGGAGTCTGCAC +
Preference number: 2 (lower is better)
Translates to: KRTNSKGLLSLKDSESAQKAFCH*RTRSLH
Trigger: GTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTT...TTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
3UTR-3UTR TCA 90 bp TTCGAAGCAGATCCAGAATGTTGTGGGACTGCTGCTTCTTGGAACTTAGGTCTTTCTTCAAATCGTCCCTaGGAGATGAGCCATCGGGGG +
Preference number: 2 (lower is better)
Translates to: FEADPECCGTAASWNLGLSSNRP*EMSHRG
Trigger: CCCCCGATGGCTCATCTCTCAGGGACGATTTGAAGA...AAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
3UTR-3UTR CCA 90 bp CAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAAGCTGGCCATTTCAAGCTGGCCATTTCTaGCAAGACAGTCTTTCCTCT +
Preference number: 2 (lower is better)
Translates to: QQRPFVTEGLGVCTSWPFQAGHF*QDSLSS
Trigger: AGAGGAAAGACTGTCTTGCCAGAAATGGCCAGCTTG...AAATGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
3UTR CAA 90 bp TGTAACTCACTCGGGTCAAAGATAGTGGAAGGCACAACAATCCCATaGGCTTTGGCAGCCTTGCGGATGATCACCTCTGCCTCTTCAAAT +
Preference number: 2 (lower is better)
Translates to: CNSLGSKIVEGTTIP*ALAALRMITSASSN
Trigger: ATTTGAAGAGGCAGAGGTGATCATCCGCAAGGCTGCCAAAGCCAATGGGATTGTTGTGCCTTCCACTATCTTTGACCCGAGTGAGTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
3UTR-3UTR CCA 90 bp TCTTTCCTCTTCAGTTTCTCCCTTACTGGAAGCGATGTTAGAAGGCTGTGCTTTCTGGTCAATGGTGTCTaGGAGTGGGGTACCGAAGCT +
Preference number: 2 (lower is better)
Translates to: SFLFSFSLTGSDVRRLCFLVNGV*EWGTEA
Trigger: AGCTTCGGTACCCCACTCCCAGACACCATTGACCAG...AAAGCACAGCCTTCTAACATCGCTTCCAGTAAGGGAGAAACTGAAGAGGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447841.5
3UTR CAA 90 bp ATGGTGACCATCCGGATATTCCAGGTTCGAAGCAGATCCAGAATGTaGTGGGACTGCTGCTTCTTGGAACTTAGGTCTTGTAACTCACTC +
Preference number: 2 (lower is better)
Translates to: MVTIRIFQVRSRSRM*WDCCFLELRSCNSL
Trigger: GAGTGAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGAATATCCGGATGGTCACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
3UTR-3UTR TCA 90 bp TGGTCAATGGTGTCTGGGAGTGGGGTACCGAAGCTCTCTGGGAGAAACAAGGTGTTTAACATCCTTGTGTaGCTTGGAGTTTTTCTGTGT +
Preference number: 2 (lower is better)
Translates to: WSMVSGSGVPKLSGRNKVFNILV*LGVFLC
Trigger: ACACAGAAAAACTCCAAGTCACACAAGGATGTTAAA...CACCTTGTTTCTCCCAGAGAGCTTCGGTACCCCACTCCCAGACACCATTGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447841.5
3UTR-3UTR TCA 90 bp AAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAAGCTGGCCATGTGTTTCATTCCTTTaGCTCTTAGCATCTGGTCAA +
Preference number: 2 (lower is better)
Translates to: KQQRPFVTEGLGVCTSWPCVSFL*LLASGQ
Trigger: TTGACCAGATGCTAAGAGTCAAAGGAATGAAACACA...TGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447841.5
3UTR-3UTR TCA 90 bp ACACAGGTCAAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGATTGTGGGCCTTTCTTaGCCATCTTTTAACATCCTT +
Preference number: 2 (lower is better)
Translates to: TQVKRTNSKGLLSLKDSEIVGLS*PSFNIL
Trigger: AAGGATGTTAAAAGATGGTCAAGAAAGGCCCACAAT...CTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTTGACCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447841.5
3UTR-3UTR CCA 90 bp TCCTCTTCAGTTTCTCCCTTACTGGAAGCGATGTTAGAAGGCTGTGCTTTTAAGCAAGCTGGCCATTTCTaGCAAGACAGTCTTTCCTCT +
Preference number: 2 (lower is better)
Translates to: SSSVSPLLEAMLEGCAFKQAGHF*QDSLSS
Trigger: AGAGGAAAGACTGTCTTGCCAGAAATGGCCAGCTTG...CTTAAAAGCACAGCCTTCTAACATCGCTTCCAGTAAGGGAGAAACTGAAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447841.5
3UTR-3UTR CCA 90 bp CTTTCCCAAGTGCATTCTGAAGGGCAAATAACAAGGAGAAAAGGATACAACAACGGAGTCTGCACAAGCTaGCCATTTCTGGCAAGACAG +
Preference number: 2 (lower is better)
Translates to: LSQVHSEGQITRRKGYNNGVCTS*PFLARQ
Trigger: CTGTCTTGCCAGAAATGGCCAGCTTGTGCAGACTCC...GTTGTTGTATCCTTTTCTCCTTGTTATTTGCCCTTCAGAATGCACTTGGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
3UTR-3UTR GCA 90 bp GTGGTCTTAAGAGCTCACACATCAGTGCACTTTGCTGGTGATCTGCATCTGCTCGAATCAAACTCCTTGTaGAATTACTTCCTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: VVLRAHTSVHFAGDLHLLESNSL*NYFLFL
Trigger: GAGGAAAAGGAAGTAATTGCACAAGGAGTTTGATTC...GAGCAGATGCAGATCACCAGCAAAGTGCACTGATGTGTGAGCTCTTAAGACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
3UTR CAA 90 bp AGATTCAATGGAGCATTTATTATGAGCCTGGACAAGCCCAGTGCTTaGATCAGATGTAAACAAGTCTACTCAGTCGTCATGCTGAGTGGT +
Preference number: 2 (lower is better)
Translates to: RFNGAFIMSLDKPSA*IRCKQVYSVVMLSG
Trigger: ACCACTCAGCATGACGACTGAGTAGACTTGTTTACATCTGATCAAAGCACTGGGCTTGTCCAGGCTCATAATAAATGCTCCATTGAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
3UTR-3UTR TCA 90 bp CTTTCCCAAGTGCATTCTGAAGGGCAAATAACAAGGAGAAAAGGATACAACAACCTGCTTTGGAGGTGCTaGGTCCATCATTGTAATAGT +
Preference number: 2 (lower is better)
Translates to: LSQVHSEGQITRRKGYNNLLWRC*VHHCNS
Trigger: ACTATTACAATGATGGACTCAGCACCTCCAAAGCAG...GTTGTTGTATCCTTTTCTCCTTGTTATTTGCCCTTCAGAATGCACTTGGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
3UTR-3UTR GCA 90 bp TTCAATGGAGCATTTATTATGAGCCTGGACAAGCCCAGTGCTTTGATCAGATGTTGTACATTTAGCATATaGTTCTCACATTCCTCCAGA +
Preference number: 2 (lower is better)
Translates to: FNGAFIMSLDKPSALIRCCTFSI*FSHSSR
Trigger: TCTGGAGGAATGTGAGAAGCATATGCTAAATGTACA...ACATCTGATCAAAGCACTGGGCTTGTCCAGGCTCATAATAAATGCTCCATTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
3UTR-3UTR CAA 90 bp AGTGGGGTACCGAAGCTCTCTGGGAGAAACAAGGTGAGGATGGCTGTCAGGATGGCCGTGACTCCAAACTaGCCCACCATCACCAGGACT +
Preference number: 3 (lower is better)
Translates to: SGVPKLSGRNKVRMAVRMAVTPN*PTITRT
Trigger: AGTCCTGGTGATGGTGGGCAAGTTTGGAGTCACGGC...CATCCTGACAGCCATCCTCACCTTGTTTCTCCCAGAGAGCTTCGGTACCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
3UTR GCA 72 bp CCCATTGGCTTTGGCAGCCTTGCGGATGATCACCTCTaGCTCTTCAAATCGTCCCTGAGAGATGAGCCATCG +
Preference number: 3 (lower is better)
Translates to: PIGFGSLADDHL*LFKSSLRDEPS
Trigger: CGATGGCTCATCTCTCAGGGACGATTTGAAGAGGCAGAGGTGATCATCCGCAAGGCTGCCAAAGCCAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
3UTR TCA 72 bp GCACAACAATCCCATTGGCTTTGGCAGCCTTGCGGATaGTCACCTCTGCCTCTTCAAATCGTCCCTGAGAGA +
Preference number: 3 (lower is better)
Translates to: AQQSHWLWQPCG*SPLPLQIVPER
Trigger: TCTCTCAGGGACGATTTGAAGAGGCAGAGGTGATCATCCGCAAGGCTGCCAAAGCCAATGGGATTGTTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
3UTR-3UTR CAA 90 bp TCCAGGTTCGAAGCAGATCCAGAATGTTGTGGGACTGCTGCTTCTTGGAACTTATTGGCTTTGGCAGCCTaGCGGATGATCACCTCTGCC +
Preference number: 3 (lower is better)
Translates to: SRFEADPECCGTAASWNLLALAA*RMITSA
Trigger: GGCAGAGGTGATCATCCGCAAGGCTGCCAAAGCCAA...TAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
3UTR-3UTR CAA 90 bp TCCAGGTTCGAAGCAGATCCAGAATGTTGTGGGACTGCTGCTTCTTGGAACTTAGGCACAACAATCCCATaGGCTTTGGCAGCCTTGCGG +
Preference number: 3 (lower is better)
Translates to: SRFEADPECCGTAASWNLGTTIP*ALAALR
Trigger: CCGCAAGGCTGCCAAAGCCAATGGGATTGTTGTGCC...TAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
3UTR GCA 72 bp CAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTaGACAAGCTGGCCATTTCTGGCAAGACAGTCTTTC +
Preference number: 3 (lower is better)
Translates to: QQRPFVTEGLGV*TSWPFLARQSF
Trigger: GAAAGACTGTCTTGCCAGAAATGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
3UTR TCA 72 bp AGGTCAAGAGGACAAACAGCAAAGGCCTTTTGTCACTaGAGGACTCGGAGTCTGCACAAGCTGGCCATTTCT +
Preference number: 3 (lower is better)
Translates to: RSRGQTAKAFCH*RTRSLHKLAIS
Trigger: AGAAATGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
3UTR GCA 72 bp CAGGTTCGAAGCAGATCCAGAATGTTGTGGGACTGCTaGTTCTTGGAACTTAGGTCTTGTAACTCACTCGGG +
Preference number: 3 (lower is better)
Translates to: QVRSRSRMLWDC*FLELRSCNSLG
Trigger: CCCGAGTGAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
3UTR CCA 72 bp CCTTTTGTCACTGAAGGACTCGGAGTCTGCACAAGCTaGCCATTTCTGGCAAGACAGTCTTTCCTCTTCAGT +
Preference number: 3 (lower is better)
Translates to: PFVTEGLGVCTS*PFLARQSFLFS
Trigger: ACTGAAGAGGAAAGACTGTCTTGCCAGAAATGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
3UTR-3UTR CAA 90 bp TCCAGAATGTTGTGGGACTGCTGCTTCTTGGAACTTAGGTCTTGTAACTCACTCACAATCCCATTGGCTTaGGCAGCCTTGCGGATGATC +
Preference number: 3 (lower is better)
Translates to: SRMLWDCCFLELRSCNSLTIPLA*AALRMI
Trigger: GATCATCCGCAAGGCTGCCAAAGCCAATGGGATTGT...GAGTGAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
3UTR-3UTR CAA 90 bp ACACAGGTCAAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGGAAAAATTAACTGCTTaGGAGGTGCTGAGTCCATCA +
Preference number: 3 (lower is better)
Translates to: TQVKRTNSKGLLSLKDSEEKLTA*EVLSPS
Trigger: TGATGGACTCAGCACCTCCAAAGCAGTTAATTTTTC...CTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTTGACCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
3UTR GCA 72 bp TTCCAGGTTCGAAGCAGATCCAGAATGTTGTGGGACTaGTGCTTCTTGGAACTTAGGTCTTGTAACTCACTC +
Preference number: 3 (lower is better)
Translates to: FQVRSRSRMLWD*CFLELRSCNSL
Trigger: GAGTGAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
3UTR-3UTR CAA 90 bp TCCTTTAAACCATACATAAGACGCTATAGTAGCAAGGAGGTTTCCACAGCAGTGAACAGCAAAGGCCTTTaGTCACTGAAGGACTCGGAG +
Preference number: 3 (lower is better)
Translates to: SFKPYIRRYSSKEVSTAVNSKGL*SLKDSE
Trigger: CTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTT...CACTGCTGTGGAAACCTCCTTGCTACTATAGCGTCTTATGTATGGTTTAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CCA 90 bp GTGCTAGAGGCTAGGGCTGGTAAGGCCTTGCACCAGTGGCAGCTGCAGACAATTCTGACACCGCCGCCTTaGTCCTGCCGCGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VLEARAGKALHQWQLQTILTPPP*SCRGWP
Trigger: AGGCCAGCCGCGGCAGGACCAAGGCGGCGGTGTCAG...AATTGTCTGCAGCTGCCACTGGTGCAAGGCCTTACCAGCCCTAGCCTCTAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp GTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGCCTCTGGTAGGCTCGCGAGCTaGCACCGCCGCCTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VAPVSLEEGGALGPYVASGRLAS*HRRLGP
Trigger: AGGACCAAGGCGGCGGTGTCAGCTCGCGAGCCTACC...AGAGGCTACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR GCA 90 bp AGTGGCCATGGAATAGCGCCGGGGCAAATATTGCAGCAGCAGCCAGGCCAACACGCTGCCCAGGCGGGATaGTGTGGAGCTGACTCCCAC +
Preference number: 4 (lower is better)
Translates to: SGHGIAPGQILQQQPGQHAAQAG*CGADSH
Trigger: GTGGGAGTCAGCTCCACAGCATCCCGCCTGGGCAGC...GTGTTGGCCTGGCTGCTGCTGCAATATTTGCCCCGGCGCTATTCCATGGCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448810.5
CDS-3UTR GCA 90 bp AGAGGGCAGTGGCCATGGAATAGCGCCGGGGCAAATATTGCAGCAGCAGCCAGGAGGGAGACAGGATGCTaGCCAGGCGGGATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RGQWPWNSAGANIAAAARRETGC*PGGMLW
Trigger: CCACAGCATCCCGCCTGGGCAGCATCCTGTCTCCCT...CCTGGCTGCTGCTGCAATATTTGCCCCGGCGCTATTCCATGGCCACTGCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448810.5
CDS-3UTR GCA 90 bp GTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGCCTCTGCTGCCCAGGCGGGATaGTGTGGAGCTGACTCCCAC +
Preference number: 4 (lower is better)
Translates to: VAPVSLEEGGALGPYVASAAQAG*CGADSH
Trigger: GTGGGAGTCAGCTCCACAGCATCCCGCCTGGGCAGC...AGAGGCTACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR CCA 90 bp CTAGGGCCATATGTAGCCTCTGAGTGTGGGTGCCCATCCAGGAGCAAGTCAGACTGGTCCTGCCGCGGCTaGCCTTACATAGGGCGCACG +
Preference number: 4 (lower is better)
Translates to: LGPYVASECGCPSRSKSDWSCRG*PYIGRT
Trigger: CGTGCGCCCTATGTAAGGCCAGCCGCGGCAGGACCA...GTCTGACTTGCTCCTGGATGGGCACCCACACTCAGAGGCTACATATGGCCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CCA 90 bp AGTGGCCATGGAATAGCGCCGGGGCAAATATTGCAGCAGCAGCCAGGCCAACACCCAGGAAGAGGGCAGTaGCCATGGAATAGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: SGHGIAPGQILQQQPGQHPGRGQ*PWNSAG
Trigger: CCCGGCGCTATTCCATGGCCACTGCCCTCTTCCTGG...GTGTTGGCCTGGCTGCTGCTGCAATATTTGCCCCGGCGCTATTCCATGGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448810.5
CDS-3UTR GCA 90 bp AGGCACAACAATCCCATTGGCTTTGGCAGCCTTGCGGATGATCACCTCTGCCTCCGTCGTAGTCCCGCATaGCGCCCTCAGAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: RHNNPIGFGSLADDHLCLRRSPA*RPQRPT
Trigger: TGTGGGCCTCTGAGGGCGGCATGCGGGACTACGACG...GAGGCAGAGGTGATCATCCGCAAGGCTGCCAAAGCCAATGGGATTGTTGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
CDS-3UTR GCA 90 bp GGTGACCATCCGGATATTCCAGGTTCGAAGCAGATCCAGAATGTTGTGGGACTGGGCACCCGGCAGCGGTaGTCCGGGGTCGCTATCAGG +
Preference number: 4 (lower is better)
Translates to: GDHPDIPGSKQIQNVVGLGTRQR*SGVAIR
Trigger: CCTGATAGCGACCCCGGAGCACCGCTGCCGGGTGCC...CAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGAATATCCGGATGGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437841.6
CDS-3UTR GCA 90 bp CTGAGTGTGGGTGCCCATCCAGGAGCAAGTCAGACACAGGTCAAGAGGACAAACGCTGCCCAGGCGGGATaGTGTGGAGCTGACTCCCAC +
Preference number: 4 (lower is better)
Translates to: LSVGAHPGASQTQVKRTNAAQAG*CGADSH
Trigger: GTGGGAGTCAGCTCCACAGCATCCCGCCTGGGCAGC...GTTTGTCCTCTTGACCTGTGTCTGACTTGCTCCTGGATGGGCACCCACACTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
3UTR CAA 72 bp GAGGGCAGTGGCCATGGAATAGCGCCGGGGCAAATATaGCAGCAGCAGCCAGGCCAACACATATGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: EGSGHGIAPGQI*QQQPGQHICWD
Trigger: GTCCCAGCATATGTGTTGGCCTGGCTGCTGCTGCAATATTTGCCCCGGCGCTATTCCATGGCCACTGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448810.5
CDS-3UTR TCA 90 bp AGAGGGCAGTGGCCATGGAATAGCGCCGGGGCAAATATTGCAGCAGCAGCCAGGTGGCAGCCTTGCGGATaGTCACCTCTGCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: RGQWPWNSAGANIAAAARWQPCG*SPLPLQ
Trigger: TTGAAGAGGCAGAGGTGATCATCCGCAAGGCTGCCA...CCTGGCTGCTGCTGCAATATTTGCCCCGGCGCTATTCCATGGCCACTGCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448810.5
CDS-3UTR GCA 90 bp TCTGTAGGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGGGAGACAGGATGCTaGCCAGGCGGGATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SVGSPSVPRGRWCSRAICRETGC*PGGMLW
Trigger: CCACAGCATCCCGCCTGGGCAGCATCCTGTCTCCCT...ACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACCTACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR GCA 90 bp ATAGCGCCGGGGCAAATATTGCAGCAGCAGCCAGGCCAACACATATGCTGGGACAGTAGGGAGACAGGATaGTGCCCAGGCGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: IAPGQILQQQPGQHICWDSRETG*CPGGML
Trigger: CAGCATCCCGCCTGGGCAGCATCCTGTCTCCCTACT...GTCCCAGCATATGTGTTGGCCTGGCTGCTGCTGCAATATTTGCCCCGGCGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448810.5
CDS-3UTR GCA 90 bp CTAGGGCCATATGTAGCCTCTGAGTGTGGGTGCCCATCCAGGAGCAAGTCAGACGGGCTGGTAAGGCCTTaGACCAGTGGCAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LGPYVASECGCPSRSKSDGLVRP*TSGSCR
Trigger: TCTGCAGCTGCCACTGGTGCAAGGCCTTACCAGCCC...GTCTGACTTGCTCCTGGATGGGCACCCACACTCAGAGGCTACATATGGCCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp AGTGGCCATGGAATAGCGCCGGGGCAAATATTGCAGCAGCAGCCAGGCCAACACTGGAAAAGGCAGCCGTaGCTCCAAACTTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: SGHGIAPGQILQQQPGQHWKRQP*LQTCPP
Trigger: TGGTGGGCAAGTTTGGAGTCACGGCTGCCTTTTCCA...GTGTTGGCCTGGCTGCTGCTGCAATATTTGCCCCGGCGCTATTCCATGGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448810.5
CDS-3UTR TCA 90 bp GTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGCCTCTGGGATGCTGTGGAGCTaGCTCCCACACCCATGTTTC +
Preference number: 4 (lower is better)
Translates to: VAPVSLEEGGALGPYVASGMLWS*LPHPCF
Trigger: GAAACATGGGTGTGGGAGTCAGCTCCACAGCATCCC...AGAGGCTACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR GCA 90 bp AGAGGGCAGTGGCCATGGAATAGCGCCGGGGCAAATATTGCAGCAGCAGCCAGGCCAGGCCAACACATATaGTGGGACTTCAACCATCGC +
Preference number: 4 (lower is better)
Translates to: RGQWPWNSAGANIAAAARPGQHI*WDFNHR
Trigger: GCGATGGTTGAAGTCCCAGCATATGTGTTGGCCTGG...CCTGGCTGCTGCTGCAATATTTGCCCCGGCGCTATTCCATGGCCACTGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448810.5
CDS-3UTR GCA 90 bp CTAGGGCCATATGTAGCCTCTGAGTGTGGGTGCCCATCCAGGAGCAAGTCAGACGCCTCTGAGTGTGGGTaGCCATCCAGGAGCAAGTCA +
Preference number: 4 (lower is better)
Translates to: LGPYVASECGCPSRSKSDASECG*PSRSKS
Trigger: TGACTTGCTCCTGGATGGGCACCCACACTCAGAGGC...GTCTGACTTGCTCCTGGATGGGCACCCACACTCAGAGGCTACATATGGCCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR CCA 90 bp GGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGCCTCAATGGTGTCTGGGAGTaGGGTACCGAAGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GSPSVPRGRWCSRAICSLNGVWE*GTEALW
Trigger: CCAGAGAGCTTCGGTACCCCACTCCCAGACACCATT...GAGGCTACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR TCA 90 bp TCTGTAGGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTGCCATATGTAGCCTCTaGGTGTGGGTGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: SVGSPSVPRGRWCSRAICAICSL*VWVPIQ
Trigger: CTGGATGGGCACCCACACTCAGAGGCTACATATGGC...ACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACCTACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR GCA 90 bp GTGGTCTTAAGAGCTCACACATCAGTGCACTTTGCTGGTGATCTGCATCTGCTCCGTCGTAGTCCCGCATaGCGCCCTCAGAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: VVLRAHTSVHFAGDLHLLRRSPA*RPQRPT
Trigger: TGTGGGCCTCTGAGGGCGGCATGCGGGACTACGACG...GAGCAGATGCAGATCACCAGCAAAGTGCACTGATGTGTGAGCTCTTAAGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR GCA 90 bp GGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGCCTCCCAGGCCAACACATATaGTGGGACTTCAACCATCGC +
Preference number: 4 (lower is better)
Translates to: GSPSVPRGRWCSRAICSLPGQHI*WDFNHR
Trigger: GCGATGGTTGAAGTCCCAGCATATGTGTTGGCCTGG...GAGGCTACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR GCA 90 bp TCAATGGTGTCTGGGAGTGGGGTACCGAAGCTCTCTGGGAGAAACAAGGTGAGGGCCTCTGAGTGTGGGTaGCCATCCAGGAGCAAGTCA +
Preference number: 4 (lower is better)
Translates to: SMVSGSGVPKLSGRNKVRASECG*PSRSKS
Trigger: TGACTTGCTCCTGGATGGGCACCCACACTCAGAGGC...CCTCACCTTGTTTCTCCCAGAGAGCTTCGGTACCCCACTCCCAGACACCATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447841.5
CDS-3UTR CCA 90 bp GTGTGGGTGCCCATCCAGGAGCAAGTCAGACACAGGTCAAGAGGACAAACAGCAAGAGGGCAGTGGCCATaGAATAGCGCCGGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: VWVPIQEQVRHRSRGQTARGQWP*NSAGAN
Trigger: ATTTGCCCCGGCGCTATTCCATGGCCACTGCCCTCT...TGCTGTTTGTCCTCTTGACCTGTGTCTGACTTGCTCCTGGATGGGCACCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CCA 90 bp CTAGGGCCATATGTAGCCTCTGAGTGTGGGTGCCCATCCAGGAGCAAGTCAGACAATGGTGTCTGGGAGTaGGGTACCGAAGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGPYVASECGCPSRSKSDNGVWE*GTEALW
Trigger: CCAGAGAGCTTCGGTACCCCACTCCCAGACACCATT...GTCTGACTTGCTCCTGGATGGGCACCCACACTCAGAGGCTACATATGGCCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR GCA 90 bp AAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAACCGCCGCCTTGGTCCTaGCGCGGCTGGCCTTACATA +
Preference number: 4 (lower is better)
Translates to: KRTNSKGLLSLKDSESAQPPPWS*RGWPYI
Trigger: TATGTAAGGCCAGCCGCGGCAGGACCAAGGCGGCGG...TTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR GCA 90 bp CGGAGTCTGCACAAGCTGGCCATTTCTGGCAAGACAGTCTTTCCTCTTCAGTTTAGGGAGACAGGATGCTaGCCAGGCGGGATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RSLHKLAISGKTVFPLQFRETGC*PGGMLW
Trigger: CCACAGCATCCCGCCTGGGCAGCATCCTGTCTCCCT...AAACTGAAGAGGAAAGACTGTCTTGCCAGAAATGGCCAGCTTGTGCAGACTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR GCA 90 bp CAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAAGCTGGCCATTTAGTAGGGAGACAGGATaGTGCCCAGGCGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: QQRPFVTEGLGVCTSWPFSRETG*CPGGML
Trigger: CAGCATCCCGCCTGGGCAGCATCCTGTCTCCCTACT...AAATGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR CCA 90 bp GTGTGGGTGCCCATCCAGGAGCAAGTCAGACACAGGTCAAGAGGACAAACAGCACAAGGAGATTGTGAGTaGGGCCTTCCAGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: VWVPIQEQVRHRSRGQTAQGDCE*GLPVVL
Trigger: GAGGACGACTGGAAGGCCCCACTCACAATCTCCTTG...TGCTGTTTGTCCTCTTGACCTGTGTCTGACTTGCTCCTGGATGGGCACCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CCA 90 bp AGTGGCCATGGAATAGCGCCGGGGCAAATATTGCAGCAGCAGCCAGGCCAACACTGTTTCTCACCACTGTaGGATACAGCTCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SGHGIAPGQILQQQPGQHCFSPL*DTARLC
Trigger: ACACAGCCGAGCTGTATCCCACAGTGGTGAGAAACA...GTGTTGGCCTGGCTGCTGCTGCAATATTTGCCCCGGCGCTATTCCATGGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448810.5
CDS-3UTR CCA 90 bp GGAAAAGGCAGCCGTGACTCCAAACTTGCCCACCATCACCAGGACTGTAGCCAAAATGGTGTCTGGGAGTaGGGTACCGAAGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GKGSRDSKLAHHHQDCSQNGVWE*GTEALW
Trigger: CCAGAGAGCTTCGGTACCCCACTCCCAGACACCATT...TTGGCTACAGTCCTGGTGATGGTGGGCAAGTTTGGAGTCACGGCTGCCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
CDS-3UTR CCA 90 bp TCTGTAGGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTCTGGTCAATGGTGTCTaGGAGTGGGGTACCGAAGCT +
Preference number: 4 (lower is better)
Translates to: SVGSPSVPRGRWCSRAICLVNGV*EWGTEA
Trigger: AGCTTCGGTACCCCACTCCCAGACACCATTGACCAG...ACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACCTACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR CCA 90 bp TCAATGGTGTCTGGGAGTGGGGTACCGAAGCTCTCTGGGAGAAACAAGGTGAGGCTGGTCAATGGTGTCTaGGAGTGGGGTACCGAAGCT +
Preference number: 4 (lower is better)
Translates to: SMVSGSGVPKLSGRNKVRLVNGV*EWGTEA
Trigger: AGCTTCGGTACCCCACTCCCAGACACCATTGACCAG...CCTCACCTTGTTTCTCCCAGAGAGCTTCGGTACCCCACTCCCAGACACCATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
3UTR CAA 72 bp CTTAGAGAAGTGCTAGAGGCTAGGGCTGGTAAGGCCTaGCACCAGTGGCAGCTGCAGACAATTGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: LREVLEARAGKA*HQWQLQTIARV
Trigger: CACTCTGGCAATTGTCTGCAGCTGCCACTGGTGCAAGGCCTTACCAGCCCTAGCCTCTAGCACTTCTCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp TCCCATGAGAATGTAGGGCAGGAAGCGGTCGTAGGCACCAAGGTAAACGAAGTAGGGGTACCAGCTGCATaGAGAGAAGGACACTGCCAC +
Preference number: 4 (lower is better)
Translates to: SHENVGQEAVVGTKVNEVGVPAA*REGHCH
Trigger: GTGGCAGTGTCCTTCTCTTCATGCAGCTGGTACCCC...TACTTCGTTTACCTTGGTGCCTACGACCGCTTCCTGCCCTACATTCTCATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448810.5
CDS-3UTR TCA 90 bp GGTCAAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCGGGATGCTGTGGAGCTaGCTCCCACACCCATGTTTC +
Preference number: 4 (lower is better)
Translates to: GQEDKQQRPFVTEGLGVCGMLWS*LPHPCF
Trigger: GAAACATGGGTGTGGGAGTCAGCTCCACAGCATCCC...GCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR TCA 90 bp TCTGTAGGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAAGGCCTTTTGTCACTaGAGGACTCGGAGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: SVGSPSVPRGRWCSRAICKAFCH*RTRSLH
Trigger: GTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTT...ACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACCTACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR GCA 90 bp TTCAATGGAGCATTTATTATGAGCCTGGACAAGCCCAGTGCTTTGATCAGATGTGGCACCCGGCAGCGGTaGTCCGGGGTCGCTATCAGG +
Preference number: 4 (lower is better)
Translates to: FNGAFIMSLDKPSALIRCGTRQR*SGVAIR
Trigger: CCTGATAGCGACCCCGGAGCACCGCTGCCGGGTGCC...ACATCTGATCAAAGCACTGGGCTTGTCCAGGCTCATAATAAATGCTCCATTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR GCA 90 bp TGGTCAATGGTGTCTGGGAGTGGGGTACCGAAGCTCTCTGGGAGAAACAAGGTGGCGGATGATCACCTCTaGCTCTTCAAATCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: WSMVSGSGVPKLSGRNKVADDHL*LFKSSL
Trigger: CAGGGACGATTTGAAGAGGCAGAGGTGATCATCCGC...CACCTTGTTTCTCCCAGAGAGCTTCGGTACCCCACTCCCAGACACCATTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448810.5
CDS-3UTR GCA 90 bp GTAGGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGCGAGCTCACACATCAGTaGACTTTGCTGGTGATCTGC +
Preference number: 4 (lower is better)
Translates to: VGSPSVPRGRWCSRAICSELTHQ*TLLVIC
Trigger: GCAGATCACCAGCAAAGTGCACTGATGTGTGAGCTC...GCTACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CCA 90 bp GTGTGGGTGCCCATCCAGGAGCAAGTCAGACACAGGTCAAGAGGACAAACAGCAGCACAACAATCCCATTaGCTTTGGCAGCCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: VWVPIQEQVRHRSRGQTAAQQSH*LWQPCG
Trigger: TCCGCAAGGCTGCCAAAGCCAATGGGATTGTTGTGC...TGCTGTTTGTCCTCTTGACCTGTGTCTGACTTGCTCCTGGATGGGCACCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CCA 90 bp GAAGGCACAACAATCCCATTGGCTTTGGCAGCCTTGCGGATGATCACCTCTGCCGCACAACAATCCCATTaGCTTTGGCAGCCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: EGTTIPLALAALRMITSAAQQSH*LWQPCG
Trigger: TCCGCAAGGCTGCCAAAGCCAATGGGATTGTTGTGC...GGCAGAGGTGATCATCCGCAAGGCTGCCAAAGCCAATGGGATTGTTGTGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
CDS-3UTR CCA 90 bp AAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAACCAGGAAGAGGGCAGTaGCCATGGAATAGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: KRTNSKGLLSLKDSESAQPGRGQ*PWNSAG
Trigger: CCCGGCGCTATTCCATGGCCACTGCCCTCTTCCTGG...TTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CCA 90 bp CATGGAAAAGGCAGCCGTGACTCCAAACTTGCCCACCATCACCAGGACTGTAGCGTCCCTAGAGGAAGGTaGTGCTCTAGGGCCATATGT +
Preference number: 4 (lower is better)
Translates to: HGKGSRDSKLAHHHQDCSVPRGR*CSRAIC
Trigger: ACATATGGCCCTAGAGCACCACCTTCCTCTAGGGAC...GCTACAGTCCTGGTGATGGTGGGCAAGTTTGGAGTCACGGCTGCCTTTTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447841.5
3UTR CAA 72 bp GTGGAAGGCACAACAATCCCATTGGCTTTGGCAGCCTaGCGGATGATCACCTCTGCCTCTTCAAATCGTCCC +
Preference number: 4 (lower is better)
Translates to: VEGTTIPLALAA*RMITSASSNRP
Trigger: GGGACGATTTGAAGAGGCAGAGGTGATCATCCGCAAGGCTGCCAAAGCCAATGGGATTGTTGTGCCTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
3UTR CAA 72 bp CTCGGGTCAAAGATAGTGGAAGGCACAACAATCCCATaGGCTTTGGCAGCCTTGCGGATGATCACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LGSKIVEGTTIP*ALAALRMITSA
Trigger: GGCAGAGGTGATCATCCGCAAGGCTGCCAAAGCCAATGGGATTGTTGTGCCTTCCACTATCTTTGACCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
CDS-3UTR TCA 90 bp CAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAAGCTGGCCATTTACAGCTGCCCTGAAATaGAGGAGCCCAACAGCACAC +
Preference number: 4 (lower is better)
Translates to: QQRPFVTEGLGVCTSWPFTAALK*RSPTAH
Trigger: GTGTGCTGTTGGGCTCCTTCATTTCAGGGCAGCTGT...AAATGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp GGTCAAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCTGGCAGCCTTGCGGATaGTCACCTCTGCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: GQEDKQQRPFVTEGLGVCWQPCG*SPLPLQ
Trigger: TTGAAGAGGCAGAGGTGATCATCCGCAAGGCTGCCA...GCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp CTCACTCGGGTCAAAGATAGTGGAAGGCACAACAATCCCATTGGCTTTGGCAGCTGGCAGCCTTGCGGATaGTCACCTCTGCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LTRVKDSGRHNNPIGFGSWQPCG*SPLPLQ
Trigger: TTGAAGAGGCAGAGGTGATCATCCGCAAGGCTGCCA...GCTGCCAAAGCCAATGGGATTGTTGTGCCTTCCACTATCTTTGACCCGAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
CDS-3UTR TCA 90 bp CTAGGGCCATATGTAGCCTCTGAGTGTGGGTGCCCATCCAGGAGCAAGTCAGACCCCAAAATAGCCCACTaGTATGGTCATCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: LGPYVASECGCPSRSKSDPKIAH*YGHPQH
Trigger: ATGCTGTGGATGACCATATCAGTGGGCTATTTTGGG...GTCTGACTTGCTCCTGGATGGGCACCCACACTCAGAGGCTACATATGGCCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp CGGAGTCTGCACAAGCTGGCCATTTCTGGCAAGACAGTCTTTCCTCTTCAGTTTGCCATATGTAGCCTCTaGGTGTGGGTGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: RSLHKLAISGKTVFPLQFAICSL*VWVPIQ
Trigger: CTGGATGGGCACCCACACTCAGAGGCTACATATGGC...AAACTGAAGAGGAAAGACTGTCTTGCCAGAAATGGCCAGCTTGTGCAGACTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR GCA 90 bp TCTGTAGGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTCCCCAGGACAAATGCTaGCACATAGTTGGAGATCTG +
Preference number: 4 (lower is better)
Translates to: SVGSPSVPRGRWCSRAICPQDKC*HIVGDL
Trigger: CAGATCTCCAACTATGTGGCAGCATTTGTCCTGGGG...ACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACCTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR GCA 90 bp AGCCGTGACTCCAAACTTGCCCACCATCACCAGGACTGTAGCCAAATAATACAAAGTAGGGAGACAGGATaGTGCCCAGGCGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: SRDSKLAHHHQDCSQIIQSRETG*CPGGML
Trigger: CAGCATCCCGCCTGGGCAGCATCCTGTCTCCCTACT...TTGTATTATTTGGCTACAGTCCTGGTGATGGTGGGCAAGTTTGGAGTCACGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
CDS-3UTR GCA 90 bp AATGGTGTCTGGGAGTGGGGTACCGAAGCTCTCTGGGAGAAACAAGGTGAGGATGAAGGACTCGGAGTCTaGACAAGCTGGCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: NGVWEWGTEALWEKQGEDEGLGV*TSWPFL
Trigger: CAGAAATGGCCAGCTTGTGCAGACTCCGAGTCCTTC...ATCCTCACCTTGTTTCTCCCAGAGAGCTTCGGTACCCCACTCCCAGACACCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447841.5
CDS-3UTR CCA 90 bp GTTTCTCACCACTGTGGGATACAGCTCGGCTGTGTACACGTAGACCATGGAAAAAGAGGGCAGTGGCCATaGAATAGCGCCGGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: VSHHCGIQLGCVHVDHGKRGQWP*NSAGAN
Trigger: ATTTGCCCCGGCGCTATTCCATGGCCACTGCCCTCT...TTTTCCATGGTCTACGTGTACACAGCCGAGCTGTATCCCACAGTGGTGAGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448810.5
CDS-3UTR CCA 90 bp CATGGAAAAGGCAGCCGTGACTCCAAACTTGCCCACCATCACCAGGACTGTAGCGGTACCGAAGCTCTCTaGGAGAAACAAGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: HGKGSRDSKLAHHHQDCSGTEAL*EKQGED
Trigger: ATCCTCACCTTGTTTCTCCCAGAGAGCTTCGGTACC...GCTACAGTCCTGGTGATGGTGGGCAAGTTTGGAGTCACGGCTGCCTTTTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
CDS-3UTR CCA 90 bp AGTGGGGTACCGAAGCTCTCTGGGAGAAACAAGGTGAGGATGGCTGTCAGGATGGGTACCGAAGCTCTCTaGGAGAAACAAGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: SGVPKLSGRNKVRMAVRMGTEAL*EKQGED
Trigger: ATCCTCACCTTGTTTCTCCCAGAGAGCTTCGGTACC...CATCCTGACAGCCATCCTCACCTTGTTTCTCCCAGAGAGCTTCGGTACCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
CDS-3UTR CCA 90 bp AGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAAGCTGGCCATTTCCTGGTCAATGGTGTCTaGGAGTGGGGTACCGAAGCT +
Preference number: 4 (lower is better)
Translates to: SKGLLSLKDSESAQAGHFLVNGV*EWGTEA
Trigger: AGCTTCGGTACCCCACTCCCAGACACCATTGACCAG...GAAATGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR CCA 90 bp GTAGGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGCCAAGCTGGCCATTTCTaGCAAGACAGTCTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VGSPSVPRGRWCSRAICSQAGHF*QDSLSS
Trigger: AGAGGAAAGACTGTCTTGCCAGAAATGGCCAGCTTG...GCTACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR TCA 90 bp GACACAGGTCAAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAAGATCTGCAGGAAGCTaGAGCCTGTCTGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: DTGQEDKQQRPFVTEGLGRSAGS*SLSACP
Trigger: TGGGCATGCAGACAGGCTTCAGCTTCCTGCAGATCT...TCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTTGACCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp GTGGTCTTAAGAGCTCACACATCAGTGCACTTTGCTGGTGATCTGCATCTGCTCTGGAAAAGGCAGCCGTaGCTCCAAACTTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: VVLRAHTSVHFAGDLHLLWKRQP*LQTCPP
Trigger: TGGTGGGCAAGTTTGGAGTCACGGCTGCCTTTTCCA...GAGCAGATGCAGATCACCAGCAAAGTGCACTGATGTGTGAGCTCTTAAGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp CTGCCCAGGCGGGATGCTGTGGAGCTGACTCCCACACCCATGTTTCTCACCACTTGTGTTTCATTCCTTTaGCTCTTAGCATCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: LPRRDAVELTPTPMFLTTCVSFL*LLASGQ
Trigger: TTGACCAGATGCTAAGAGTCAAAGGAATGAAACACA...AGTGGTGAGAAACATGGGTGTGGGAGTCAGCTCCACAGCATCCCGCCTGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447841.5
CDS-3UTR GCA 90 bp GGTCAAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCAAGCTGAAGCCTGTCTaGATGCCCATGGTCACGAAC +
Preference number: 4 (lower is better)
Translates to: GQEDKQQRPFVTEGLGVCKLKPV*MPMVTN
Trigger: GTTCGTGACCATGGGCATGCAGACAGGCTTCAGCTT...GCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR GCA 90 bp GCAGGAAGCGGTCGTAGGCACCAAGGTAAACGAAGTAGGGAGACAGGATGCTGCATGTTGTGGGACTGCTaGTTCTTGGAACTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: AGSGRRHQGKRSRETGCCMLWDC*FLELRS
Trigger: AGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACAT...GCAGCATCCTGTCTCCCTACTTCGTTTACCTTGGTGCCTACGACCGCTTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
CDS-3UTR GCA 90 bp GTAGGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGCAGAATGTTGTGGGACTaGTGCTTCTTGGAACTTAGG +
Preference number: 4 (lower is better)
Translates to: VGSPSVPRGRWCSRAICSRMLWD*CFLELR
Trigger: CCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCT...GCTACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR GCA 90 bp GGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGCCTCACAAAGATGTCCCCATaGAAGTTAGGAGTATCAAGC +
Preference number: 4 (lower is better)
Translates to: GSPSVPRGRWCSRAICSLTKMSP*KLGVSS
Trigger: GCTTGATACTCCTAACTTGCATGGGGACATCTTTGT...GAGGCTACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CCA 90 bp GGTAAGGCCTTGCACCAGTGGCAGCTGCAGACAATTGCCAGAGTGATTCTGTTTGGAGTCTGCACAAGCTaGCCATTTCTGGCAAGACAG +
Preference number: 4 (lower is better)
Translates to: GKALHQWQLQTIARVILFGVCTS*PFLARQ
Trigger: CTGTCTTGCCAGAAATGGCCAGCTTGTGCAGACTCC...AAACAGAATCACTCTGGCAATTGTCTGCAGCTGCCACTGGTGCAAGGCCTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CCA 90 bp ACACAGGTCAAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTGCGCTCTCCTGCCCTaGGGAAGCAATGATCCAGTT +
Preference number: 4 (lower is better)
Translates to: TQVKRTNSKGLLSLKDSECALLP*GSNDPV
Trigger: AACTGGATCATTGCTTCCCCAGGGCAGGAGAGCGCA...CTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTTGACCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp GTGGTCTTAAGAGCTCACACATCAGTGCACTTTGCTGGTGATCTGCATCTGCTCAGAACAAGGAGATTGTaGGTGGGGCCTTCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: VVLRAHTSVHFAGDLHLLRTRRL*VGPSSR
Trigger: ACGACTGGAAGGCCCCACTCACAATCTCCTTGTTCT...GAGCAGATGCAGATCACCAGCAAAGTGCACTGATGTGTGAGCTCTTAAGACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp GTTTCTCACCACTGTGGGATACAGCTCGGCTGTGTACACGTAGACCATGGAAAAAAGGCCTTTTGTCACTaGAGGACTCGGAGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: VSHHCGIQLGCVHVDHGKKAFCH*RTRSLH
Trigger: GTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTT...TTTTCCATGGTCTACGTGTACACAGCCGAGCTGTATCCCACAGTGGTGAGAAAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447841.5
CDS-3UTR TCA 90 bp CTGAGTGTGGGTGCCCATCCAGGAGCAAGTCAGACACAGGTCAAGAGGACAAACCTGCTTTGGAGGTGCTaGGTCCATCATTGTAATAGT +
Preference number: 4 (lower is better)
Translates to: LSVGAHPGASQTQVKRTNLLWRC*VHHCNS
Trigger: ACTATTACAATGATGGACTCAGCACCTCCAAAGCAG...GTTTGTCCTCTTGACCTGTGTCTGACTTGCTCCTGGATGGGCACCCACACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR TCA 90 bp GTGTGGGTGCCCATCCAGGAGCAAGTCAGACACAGGTCAAGAGGACAAACAGCACCCACATTACAGCTTTaGGAGAAAAGACAACGTTGC +
Preference number: 4 (lower is better)
Translates to: VWVPIQEQVRHRSRGQTAPTLQL*EKRQRC
Trigger: GCAACGTTGTCTTTTCTCTCAAAGCTGTAATGTGGG...TGCTGTTTGTCCTCTTGACCTGTGTCTGACTTGCTCCTGGATGGGCACCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR GCA 90 bp CGGAGTCTGCACAAGCTGGCCATTTCTGGCAAGACAGTCTTTCCTCTTCAGTTTGCGGATGATCACCTCTaGCTCTTCAAATCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RSLHKLAISGKTVFPLQFADDHL*LFKSSL
Trigger: CAGGGACGATTTGAAGAGGCAGAGGTGATCATCCGC...AAACTGAAGAGGAAAGACTGTCTTGCCAGAAATGGCCAGCTTGTGCAGACTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR GCA 90 bp AGTGGGGTACCGAAGCTCTCTGGGAGAAACAAGGTGAGGATGGCTGTCAGGATGATGTTGTGGGACTGCTaGTTCTTGGAACTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: SGVPKLSGRNKVRMAVRMMLWDC*FLELRS
Trigger: AGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACAT...CATCCTGACAGCCATCCTCACCTTGTTTCTCCCAGAGAGCTTCGGTACCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
CDS-3UTR GCA 90 bp GCCCAGGCGGGATGCTGTGGAGCTGACTCCCACACCCATGTTTCTCACCACTGTGAATCAAACTCCTTGTaGAATTACTTCCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: AQAGCCGADSHTHVSHHCESNSL*NYFLFL
Trigger: GAGGAAAAGGAAGTAATTGCACAAGGAGTTTGATTC...ACAGTGGTGAGAAACATGGGTGTGGGAGTCAGCTCCACAGCATCCCGCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447841.5
CDS-3UTR GCA 90 bp GTAGGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGCGCAGCTGCAGACAATTaGCAGAGTGATTCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: VGSPSVPRGRWCSRAICSAAADN*QSDSVL
Trigger: TAAAACAGAATCACTCTGGCAATTGTCTGCAGCTGC...GCTACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CCA 90 bp GAAGGCACAACAATCCCATTGGCTTTGGCAGCCTTGCGGATGATCACCTCTGCCAGATCCAGAATGTTGTaGGACTGCTGCTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: EGTTIPLALAALRMITSARSRML*DCCFLE
Trigger: TTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCT...GGCAGAGGTGATCATCCGCAAGGCTGCCAAAGCCAATGGGATTGTTGTGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
CDS-3UTR CCA 90 bp AGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAAGCTGGCCATTTCTGTTTCTCACCACTGTaGGATACAGCTCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SKGLLSLKDSESAQAGHFCFSPL*DTARLC
Trigger: ACACAGCCGAGCTGTATCCCACAGTGGTGAGAAACA...GAAATGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR CCA 90 bp CAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAAGCTGGCCATTTGGTACCGAAGCTCTCTaGGAGAAACAAGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: QQRPFVTEGLGVCTSWPFGTEAL*EKQGED
Trigger: ATCCTCACCTTGTTTCTCCCAGAGAGCTTCGGTACC...AAATGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR TCA 90 bp GTAGGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGCATTGTGGGCCTTTCTTaGCCATCTTTTAACATCCTT +
Preference number: 4 (lower is better)
Translates to: VGSPSVPRGRWCSRAICSIVGLS*PSFNIL
Trigger: AAGGATGTTAAAAGATGGTCAAGAAAGGCCCACAAT...GCTACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR TCA 90 bp AGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAAGCTGGCCATTTCAGTGCACTTTGCTGGTaGTCTGCATCTGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: SKGLLSLKDSESAQAGHFSALCW*SASAHS
Trigger: AGAATGAGCAGATGCAGATCACCAGCAAAGTGCACT...GAAATGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp GACACAGGTCAAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAACTCAGTCGTCATGCTaGGTGGTCTTAAGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: DTGQEDKQQRPFVTEGLGTQSSC*VVLRAH
Trigger: GTGAGCTCTTAAGACCACTCAGCATGACGACTGAGT...TCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTTGACCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp CTGAGTGTGGGTGCCCATCCAGGAGCAAGTCAGACACAGGTCAAGAGGACAAACACAAGCCCAGTGCTTTaGTCAGATGTAAACAAGTCT +
Preference number: 4 (lower is better)
Translates to: LSVGAHPGASQTQVKRTNTSPVL*SDVNKS
Trigger: AGACTTGTTTACATCTGATCAAAGCACTGGGCTTGT...GTTTGTCCTCTTGACCTGTGTCTGACTTGCTCCTGGATGGGCACCCACACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR GCA 90 bp AGGTTCGAAGCAGATCCAGAATGTTGTGGGACTGCTGCTTCTTGGAACTTAGGTGCGGATGATCACCTCTaGCTCTTCAAATCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RFEADPECCGTAASWNLGADDHL*LFKSSL
Trigger: CAGGGACGATTTGAAGAGGCAGAGGTGATCATCCGC...ACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
CDS-3UTR GCA 90 bp GAGAATGTAGGGCAGGAAGCGGTCGTAGGCACCAAGGTAAACGAAGTAGGGAGAAGAATGTTGTGGGACTaGTGCTTCTTGGAACTTAGG +
Preference number: 4 (lower is better)
Translates to: ENVGQEAVVGTKVNEVGRRMLWD*CFLELR
Trigger: CCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCT...TCTCCCTACTTCGTTTACCTTGGTGCCTACGACCGCTTCCTGCCCTACATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
CDS-3UTR CCA 90 bp CTGAGTGTGGGTGCCCATCCAGGAGCAAGTCAGACACAGGTCAAGAGGACAAACCAAATAATACAAGTCTaGGGGTACCAGCTGCATGAA +
Preference number: 4 (lower is better)
Translates to: LSVGAHPGASQTQVKRTNQIIQV*GYQLHE
Trigger: TTCATGCAGCTGGTACCCCCAGACTTGTATTATTTG...GTTTGTCCTCTTGACCTGTGTCTGACTTGCTCCTGGATGGGCACCCACACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CCA 90 bp AGTGGGGTACCGAAGCTCTCTGGGAGAAACAAGGTGAGGATGGCTGTCAGGATGCAAATAATACAAGTCTaGGGGTACCAGCTGCATGAA +
Preference number: 4 (lower is better)
Translates to: SGVPKLSGRNKVRMAVRMQIIQV*GYQLHE
Trigger: TTCATGCAGCTGGTACCCCCAGACTTGTATTATTTG...CATCCTGACAGCCATCCTCACCTTGTTTCTCCCAGAGAGCTTCGGTACCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448810.5
CDS-3UTR CCA 90 bp GACACAGGTCAAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGATGTTTCTCACCACTGTaGGATACAGCTCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: DTGQEDKQQRPFVTEGLGCFSPL*DTARLC
Trigger: ACACAGCCGAGCTGTATCCCACAGTGGTGAGAAACA...TCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTTGACCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR CCA 90 bp CATCTGCTCATTCTGCTCCATCTTCATTACCTTTCACTTTCCCTAGCTCTGCGCGTCCCTAGAGGAAGGTaGTGCTCTAGGGCCATATGT +
Preference number: 4 (lower is better)
Translates to: HLLILLHLHYLSLSLALRVPRGR*CSRAIC
Trigger: ACATATGGCCCTAGAGCACCACCTTCCTCTAGGGAC...GCGCAGAGCTAGGGAAAGTGAAAGGTAATGAAGATGGAGCAGAATGAGCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
3UTR CAA 72 bp TCAAAGATAGTGGAAGGCACAACAATCCCATTGGCTTaGGCAGCCTTGCGGATGATCACCTCTGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SKIVEGTTIPLA*AALRMITSASS
Trigger: TGAAGAGGCAGAGGTGATCATCCGCAAGGCTGCCAAAGCCAATGGGATTGTTGTGCCTTCCACTATCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
CDS-3UTR TCA 90 bp TTCAATGGAGCATTTATTATGAGCCTGGACAAGCCCAGTGCTTTGATCAGATGTGGGGTACCAGCTGCATaGAGAGAAGGACACTGCCAC +
Preference number: 4 (lower is better)
Translates to: FNGAFIMSLDKPSALIRCGVPAA*REGHCH
Trigger: GTGGCAGTGTCCTTCTCTTCATGCAGCTGGTACCCC...ACATCTGATCAAAGCACTGGGCTTGTCCAGGCTCATAATAAATGCTCCATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp TCTTTCCTCTTCAGTTTCTCCCTTACTGGAAGCGATGTTAGAAGGCTGTGCTTTTGGAAAAGGCAGCCGTaGCTCCAAACTTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: SFLFSFSLTGSDVRRLCFWKRQP*LQTCPP
Trigger: TGGTGGGCAAGTTTGGAGTCACGGCTGCCTTTTCCA...AAAGCACAGCCTTCTAACATCGCTTCCAGTAAGGGAGAAACTGAAGAGGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447841.5
CDS-3UTR TCA 90 bp TCTGTAGGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTGTTACAGGACTAAAGTaGGCTACTCTGAAAGACTAT +
Preference number: 4 (lower is better)
Translates to: SVGSPSVPRGRWCSRAICVTGLK*ATLKDY
Trigger: ATAGTCTTTCAGAGTAGCTCACTTTAGTCCTGTAAC...ACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACCTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR GCA 90 bp ACACAGGTCAAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTGTCCCCAGGACAAATaGTGCCACATAGTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: TQVKRTNSKGLLSLKDSECPQDK*CHIVGD
Trigger: ATCTCCAACTATGTGGCAGCATTTGTCCTGGGGACA...CTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTTGACCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR GCA 90 bp GGTAAGGCCTTGCACCAGTGGCAGCTGCAGACAATTGCCAGAGTGATTCTGTTTATGTTGTGGGACTGCTaGTTCTTGGAACTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: GKALHQWQLQTIARVILFMLWDC*FLELRS
Trigger: AGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACAT...AAACAGAATCACTCTGGCAATTGTCTGCAGCTGCCACTGGTGCAAGGCCTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR GCA 90 bp CTCACTCGGGTCAAAGATAGTGGAAGGCACAACAATCCCATTGGCTTTGGCAGCAGAATGTTGTGGGACTaGTGCTTCTTGGAACTTAGG +
Preference number: 4 (lower is better)
Translates to: LTRVKDSGRHNNPIGFGSRMLWD*CFLELR
Trigger: CCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCT...GCTGCCAAAGCCAATGGGATTGTTGTGCCTTCCACTATCTTTGACCCGAGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
CDS-3UTR GCA 90 bp GTGCTAGAGGCTAGGGCTGGTAAGGCCTTGCACCAGTGGCAGCTGCAGACAATTTGTACATTTAGCATATaGTTCTCACATTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VLEARAGKALHQWQLQTICTFSI*FSHSSR
Trigger: TCTGGAGGAATGTGAGAAGCATATGCTAAATGTACA...AATTGTCTGCAGCTGCCACTGGTGCAAGGCCTTACCAGCCCTAGCCTCTAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR GCA 90 bp GTAGGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGCTGTACATTTAGCATATaGTTCTCACATTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VGSPSVPRGRWCSRAICSCTFSI*FSHSSR
Trigger: TCTGGAGGAATGTGAGAAGCATATGCTAAATGTACA...GCTACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR GCA 90 bp GTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGCCTCTGAATCAAACTCCTTGTaGAATTACTTCCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: VAPVSLEEGGALGPYVASESNSL*NYFLFL
Trigger: GAGGAAAAGGAAGTAATTGCACAAGGAGTTTGATTC...AGAGGCTACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR CCA 90 bp AGCCGTGACTCCAAACTTGCCCACCATCACCAGGACTGTAGCCAAATAATACAAGGCCAACACATATGCTaGGACTTCAACCATCGCACA +
Preference number: 4 (lower is better)
Translates to: SRDSKLAHHHQDCSQIIQGQHIC*DFNHRT
Trigger: TGTGCGATGGTTGAAGTCCCAGCATATGTGTTGGCC...TTGTATTATTTGGCTACAGTCCTGGTGATGGTGGGCAAGTTTGGAGTCACGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448810.5
3UTR CAA 72 bp CGAAGCAGATCCAGAATGTTGTGGGACTGCTGCTTCTaGGAACTTAGGTCTTGTAACTCACTCGGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: RSRSRMLWDCCF*ELRSCNSLGSK
Trigger: CTTTGACCCGAGTGAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
CDS-3UTR TCA 90 bp TTCAATGGAGCATTTATTATGAGCCTGGACAAGCCCAGTGCTTTGATCAGATGTTCTTCAAATCGTCCCTaGGAGATGAGCCATCGGGGG +
Preference number: 4 (lower is better)
Translates to: FNGAFIMSLDKPSALIRCSSNRP*EMSHRG
Trigger: CCCCCGATGGCTCATCTCTCAGGGACGATTTGAAGA...ACATCTGATCAAAGCACTGGGCTTGTCCAGGCTCATAATAAATGCTCCATTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp GTGGTCTTAAGAGCTCACACATCAGTGCACTTTGCTGGTGATCTGCATCTGCTCGACTTCAACCATCGCTaGAAGGAAGCAGTTCACAAA +
Preference number: 4 (lower is better)
Translates to: VVLRAHTSVHFAGDLHLLDFNHR*KEAVHK
Trigger: TTTGTGAACTGCTTCCTTTCAGCGATGGTTGAAGTC...GAGCAGATGCAGATCACCAGCAAAGTGCACTGATGTGTGAGCTCTTAAGACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp CGGAGTCTGCACAAGCTGGCCATTTCTGGCAAGACAGTCTTTCCTCTTCAGTTTTTCCCAAGTGCATTCTaGAGGGCAAATAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: RSLHKLAISGKTVFPLQFFPSAF*RANNKE
Trigger: CTCCTTGTTATTTGCCCTTCAGAATGCACTTGGGAA...AAACTGAAGAGGAAAGACTGTCTTGCCAGAAATGGCCAGCTTGTGCAGACTCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR GCA 90 bp CGGAGTCTGCACAAGCTGGCCATTTCTGGCAAGACAGTCTTTCCTCTTCAGTTTAGAATGTTGTGGGACTaGTGCTTCTTGGAACTTAGG +
Preference number: 4 (lower is better)
Translates to: RSLHKLAISGKTVFPLQFRMLWD*CFLELR
Trigger: CCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCT...AAACTGAAGAGGAAAGACTGTCTTGCCAGAAATGGCCAGCTTGTGCAGACTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR GCA 90 bp CTTTCCCAAGTGCATTCTGAAGGGCAAATAACAAGGAGAAAAGGATACAACAACAGCTCTGCGCTCTCCTaGCCTGGGGAAGCAATGATC +
Preference number: 4 (lower is better)
Translates to: LSQVHSEGQITRRKGYNNSSALS*PGEAMI
Trigger: GATCATTGCTTCCCCAGGGCAGGAGAGCGCAGAGCT...GTTGTTGTATCCTTTTCTCCTTGTTATTTGCCCTTCAGAATGCACTTGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CCA 90 bp GTGGTCTTAAGAGCTCACACATCAGTGCACTTTGCTGGTGATCTGCATCTGCTCAGATCCAGAATGTTGTaGGACTGCTGCTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: VVLRAHTSVHFAGDLHLLRSRML*DCCFLE
Trigger: TTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCT...GAGCAGATGCAGATCACCAGCAAAGTGCACTGATGTGTGAGCTCTTAAGACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CCA 90 bp AAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAACAAGCTGGCCATTTCTaGCAAGACAGTCTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KRTNSKGLLSLKDSESAQQAGHF*QDSLSS
Trigger: AGAGGAAAGACTGTCTTGCCAGAAATGGCCAGCTTG...TTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR TCA 90 bp AAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAACTGCTTTGGAGGTGCTaGGTCCATCATTGTAATAGT +
Preference number: 4 (lower is better)
Translates to: KRTNSKGLLSLKDSESAQLLWRC*VHHCNS
Trigger: ACTATTACAATGATGGACTCAGCACCTCCAAAGCAG...TTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR GCA 90 bp TTCAATGGAGCATTTATTATGAGCCTGGACAAGCCCAGTGCTTTGATCAGATGTGAAGGACTCGGAGTCTaGACAAGCTGGCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: FNGAFIMSLDKPSALIRCEGLGV*TSWPFL
Trigger: CAGAAATGGCCAGCTTGTGCAGACTCCGAGTCCTTC...ACATCTGATCAAAGCACTGGGCTTGTCCAGGCTCATAATAAATGCTCCATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR GCA 90 bp GTCTTAAGAGCTCACACATCAGTGCACTTTGCTGGTGATCTGCATCTGCTCATTACTTTGCTGGTGATCTaGATCTGCTCATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VLRAHTSVHFAGDLHLLITLLVI*ICSFCS
Trigger: GGAGCAGAATGAGCAGATGCAGATCACCAGCAAAGT...AATGAGCAGATGCAGATCACCAGCAAAGTGCACTGATGTGTGAGCTCTTAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CCA 90 bp AGCCGTGACTCCAAACTTGCCCACCATCACCAGGACTGTAGCCAAATAATACAAAGATCCAGAATGTTGTaGGACTGCTGCTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SRDSKLAHHHQDCSQIIQRSRML*DCCFLE
Trigger: TTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCT...TTGTATTATTTGGCTACAGTCCTGGTGATGGTGGGCAAGTTTGGAGTCACGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
CDS-3UTR CCA 90 bp GACACAGGTCAAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAAATAGCCCACTGATATaGTCATCCACAGCATTATGG +
Preference number: 4 (lower is better)
Translates to: DTGQEDKQQRPFVTEGLGNSPLI*SSTALW
Trigger: CCATAATGCTGTGGATGACCATATCAGTGGGCTATT...TCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTTGACCTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR GCA 90 bp TTCGAAGCAGATCCAGAATGTTGTGGGACTGCTGCTTCTTGGAACTTAGGTCTTATGTTGTGGGACTGCTaGTTCTTGGAACTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: FEADPECCGTAASWNLGLMLWDC*FLELRS
Trigger: AGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACAT...AAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
CDS-3UTR TCA 90 bp ACACAGGTCAAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTTTAACATCCTTGTGTaGCTTGGAGTTTTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: TQVKRTNSKGLLSLKDSEFNILV*LGVFLC
Trigger: ACACAGAAAAACTCCAAGTCACACAAGGATGTTAAA...CTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTTGACCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR CCA 90 bp TCCTCTTCAGTTTCTCCCTTACTGGAAGCGATGTTAGAAGGCTGTGCTTTTAAGAGATCCAGAATGTTGTaGGACTGCTGCTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SSSVSPLLEAMLEGCAFKRSRML*DCCFLE
Trigger: TTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCT...CTTAAAAGCACAGCCTTCTAACATCGCTTCCAGTAAGGGAGAAACTGAAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447841.5
CDS-3UTR CCA 90 bp GTGGTCTTAAGAGCTCACACATCAGTGCACTTTGCTGGTGATCTGCATCTGCTCCATCCTTGTGTGACTTaGAGTTTTTCTGTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: VVLRAHTSVHFAGDLHLLHPCVT*SFSVFH
Trigger: ATGAAACACAGAAAAACTCCAAGTCACACAAGGATG...GAGCAGATGCAGATCACCAGCAAAGTGCACTGATGTGTGAGCTCTTAAGACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000245407.8
3UTR CAA 72 bp GGAGCATTTATTATGAGCCTGGACAAGCCCAGTGCTTaGATCAGATGTAAACAAGTCTACTCAGTCGTCATG +
Preference number: 4 (lower is better)
Translates to: GAFIMSLDKPSA*IRCKQVYSVVM
Trigger: CATGACGACTGAGTAGACTTGTTTACATCTGATCAAAGCACTGGGCTTGTCCAGGCTCATAATAAATGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp GTCTTAAGAGCTCACACATCAGTGCACTTTGCTGGTGATCTGCATCTGCTCATTTGTGTTTCATTCCTTTaGCTCTTAGCATCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: VLRAHTSVHFAGDLHLLICVSFL*LLASGQ
Trigger: TTGACCAGATGCTAAGAGTCAAAGGAATGAAACACA...AATGAGCAGATGCAGATCACCAGCAAAGTGCACTGATGTGTGAGCTCTTAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp GTCTTAAGAGCTCACACATCAGTGCACTTTGCTGGTGATCTGCATCTGCTCATTATTGTGGGCCTTTCTTaGCCATCTTTTAACATCCTT +
Preference number: 4 (lower is better)
Translates to: VLRAHTSVHFAGDLHLLIIVGLS*PSFNIL
Trigger: AAGGATGTTAAAAGATGGTCAAGAAAGGCCCACAAT...AATGAGCAGATGCAGATCACCAGCAAAGTGCACTGATGTGTGAGCTCTTAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp CTTTCCCAAGTGCATTCTGAAGGGCAAATAACAAGGAGAAAAGGATACAACAACATGGAGCATTTATTATaGGCCTGGACAAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LSQVHSEGQITRRKGYNNMEHLL*AWTSPV
Trigger: CACTGGGCTTGTCCAGGCTCATAATAAATGCTCCAT...GTTGTTGTATCCTTTTCTCCTTGTTATTTGCCCTTCAGAATGCACTTGGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CCA 90 bp CTGTGTTTCATTCCTTTGACTCTTAGCATCTGGTCAATGGTGTCTGGGAGTGGGCATCCTTGTGTGACTTaGAGTTTTTCTGTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LCFIPLTLSIWSMVSGSGHPCVT*SFSVFH
Trigger: ATGAAACACAGAAAAACTCCAAGTCACACAAGGATG...CCCACTCCCAGACACCATTGACCAGATGCTAAGAGTCAAAGGAATGAAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447841.5
CDS-3UTR GCA 90 bp TCCTTTAAACCATACATAAGACGCTATAGTAGCAAGGAGGTTTCCACAGCAGTGGAGAAAAGACAACGTTaGTCATCTCTCTCACCTGAT +
Preference number: 4 (lower is better)
Translates to: SFKPYIRRYSSKEVSTAVEKRQR*SSLSPD
Trigger: ATCAGGTGAGAGAGATGAGCAACGTTGTCTTTTCTC...CACTGCTGTGGAAACCTCCTTGCTACTATAGCGTCTTATGTATGGTTTAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR TCA 90 bp TTCAATGGAGCATTTATTATGAGCCTGGACAAGCCCAGTGCTTTGATCAGATGTTTTAACATCCTTGTGTaGCTTGGAGTTTTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: FNGAFIMSLDKPSALIRCFNILV*LGVFLC
Trigger: ACACAGAAAAACTCCAAGTCACACAAGGATGTTAAA...ACATCTGATCAAAGCACTGGGCTTGTCCAGGCTCATAATAAATGCTCCATTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS CCA 90 bp CGGCTGGCCTTACATAGGGCGCACGACCAGGGAAGGTTGCGGGCCTaGGCCGCAAGGCGCGCCCCGCTGGCAGGCAGAGCGGCGCCGGCG +
Preference number: 5 (lower is better)
Translates to: RLALHRAHDQGRLRA*AARRAPLAGRAAPA
Trigger: CGCCGGCGCCGCTCTGCCTGCCAGCGGGGCGCGCCTTGCGGCCCAGGCCCGCAACCTTCCCTGGTCGTGCGCCCTATGTAAGGCCAGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS CCA 90 bp GTCGTAGTCCCGCATGCCGCCCTCAGAGGCCCACAGAGCGCGGCCTaGGGTCGGGGAACGCGGCGGGCTTTGCGCGTGCGCGCGGGGCAC +
Preference number: 5 (lower is better)
Translates to: VVVPHAALRGPQSAA*GRGTRRALRVRAGH
Trigger: GTGCCCCGCGCGCACGCGCAAAGCCCGCCGCGTTCCCCGACCCCAGGCCGCGCTCTGTGGGCCTCTGAGGGCGGCATGCGGGACTACGAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS GCA 90 bp TCCTGCCGCGGCTGGCCTTACATAGGGCGCACGACCAGGGAAGGTTaGGGGCCTGGGCCGCAAGGCGCGCCCCGCTGGCAGGCAGAGCGG +
Preference number: 5 (lower is better)
Translates to: SCRGWPYIGRTTREG*GPGPQGAPRWQAER
Trigger: CCGCTCTGCCTGCCAGCGGGGCGCGCCTTGCGGCCCAGGCCCGCAACCTTCCCTGGTCGTGCGCCCTATGTAAGGCCAGCCGCGGCAGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS CCA 90 bp AGCCTCCGGGCACCTCTCAGAGGGGTTGGCAGGCAACCCTCAGGCTaGACACGGAGAACTCCCGCAGCAGGCACACTGCTGGTGCTCCGC +
Preference number: 5 (lower is better)
Translates to: SLRAPLRGVGRQPSG*TRRTPAAGTLLVLR
Trigger: GCGGAGCACCAGCAGTGTGCCTGCTGCGGGAGTTCTCCGTGTCCAGCCTGAGGGTTGCCTGCCAACCCCTCTGAGAGGTGCCCGGAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 90 bp GACACCAGCCCCGCGGTACTTGTGGAGCACAGAGGTGGCTCCCAATaGAGGGGCCACACTGCCTCTCATCAGGATGCCCTGCAGTACCCC +
Preference number: 5 (lower is better)
Translates to: DTSPAVLVEHRGGSQ*RGHTASHQDALQYP
Trigger: GGGGTACTGCAGGGCATCCTGATGAGAGGCAGTGTGGCCCCTCCATTGGGAGCCACCTCTGTGCTCCACAAGTACCGCGGGGCTGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS-3UTR CAA 90 bp CTGAGTGTGGGTGCCCATCCAGGAGCAAGTCAGACACAGGTCAAGAGGACAAACGCTGACACCGCCGCCTaGGTCCTGCCGCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LSVGAHPGASQTQVKRTNADTAA*VLPRLA
Trigger: GGCCAGCCGCGGCAGGACCAAGGCGGCGGTGTCAGC...GTTTGTCCTCTTGACCTGTGTCTGACTTGCTCCTGGATGGGCACCCACACTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS CCA 90 bp GTGACAGGGAAAAACAAGCCTGCTTCTCCGCACTGCTGGGCAGTGTaGGCGCACAGCCTCCGGGCACCTCTCAGAGGGGTTGGCAGGCAA +
Preference number: 5 (lower is better)
Translates to: VTGKNKPASPHCWAV*AHSLRAPLRGVGRQ
Trigger: TTGCCTGCCAACCCCTCTGAGAGGTGCCCGGAGGCTGTGCGCCCACACTGCCCAGCAGTGCGGAGAAGCAGGCTTGTTTTTCCCTGTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 90 bp GAGCGGAGCCCAGGGCTGTGGAAGAGGCAGGGCACCCTCGCTCAGTaGGGTTCAGGCCATTGGCATGAACGTCACTGGAGTGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: ERSPGLWKRQGTLAQ*GSGHWHERHWSGSG
Trigger: TCCAGAACCACTCCAGTGACGTTCATGCCAATGGCCTGAACCCCACTGAGCGAGGGTGCCCTGCCTCTTCCACAGCCCTGGGCTCCGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 90 bp GAAGAGGCTGGTCAGAGACAGCTGACACCAGCCCCGCGGTACTTGTaGAGCACAGAGGTGGCTCCCAATGGAGGGGCCACACTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: EEAGQRQLTPAPRYL*STEVAPNGGATLPL
Trigger: GAGAGGCAGTGTGGCCCCTCCATTGGGAGCCACCTCTGTGCTCCACAAGTACCGCGGGGCTGGTGTCAGCTGTCTCTGACCAGCCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS-3UTR CAA 90 bp GTAGGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGCCACGACCAGGGAAGGTaGCGGGCCTGGGCCGCAAGG +
Preference number: 5 (lower is better)
Translates to: VGSPSVPRGRWCSRAICSHDQGR*RAWAAR
Trigger: CCTTGCGGCCCAGGCCCGCAACCTTCCCTGGTCGTG...GCTACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS GCA 90 bp CCCAGACTAGCAGGAGTCAAGAACATGGGAGGACCACAGCCTGACTaGCCAGGCTGCCACAGCCTCCAACCTCCACAGCCTCAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: PRLAGVKNMGGPQPD*PGCHSLQPPQPQKG
Trigger: GCCCTTCTGAGGCTGTGGAGGTTGGAGGCTGTGGCAGCCTGGGCAGTCAGGCTGTGGTCCTCCCATGTTCTTGACTCCTGCTAGTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 90 bp GGCACCCTCGCTCAGTGGGGTTCAGGCCATTGGCATGAACGTCACTaGAGTGGTTCTGGAAGCAGGGCTCTGGGGCTCTACGGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: GTLAQWGSGHWHERH*SGSGSRALGLYGPK
Trigger: CTTTGGCCCGTAGAGCCCCAGAGCCCTGCTTCCAGAACCACTCCAGTGACGTTCATGCCAATGGCCTGAACCCCACTGAGCGAGGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 90 bp CTGTGGAAGAGGCAGGGCACCCTCGCTCAGTGGGGTTCAGGCCATTaGCATGAACGTCACTGGAGTGGTTCTGGAAGCAGGGCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: LWKRQGTLAQWGSGH*HERHWSGSGSRALG
Trigger: CCCCAGAGCCCTGCTTCCAGAACCACTCCAGTGACGTTCATGCCAATGGCCTGAACCCCACTGAGCGAGGGTGCCCTGCCTCTTCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 90 bp ACAGCCTCAGAAGGGCCAGCACCCACAGGCCATCTCTCTGGTAGGTaGGTAAGTATCCCTGCAGTGGCCCCCACCCACACATGGCTGCTA +
Preference number: 5 (lower is better)
Translates to: TASEGPAPTGHLSGR*VSIPAVAPTHTWLL
Trigger: TAGCAGCCATGTGTGGGTGGGGGCCACTGCAGGGATACTTACCCACCTACCAGAGAGATGGCCTGTGGGTGCTGGCCCTTCTGAGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS-3UTR CAA 90 bp AGTGGCCATGGAATAGCGCCGGGGCAAATATTGCAGCAGCAGCCAGGCCAACACGCGCCGGGGCAAATATaGCAGCAGCAGCCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: SGHGIAPGQILQQQPGQHAPGQI*QQQPGQ
Trigger: TTGGCCTGGCTGCTGCTGCAATATTTGCCCCGGCGC...GTGTTGGCCTGGCTGCTGCTGCAATATTTGCCCCGGCGCTATTCCATGGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448810.5
CDS GCA 90 bp CACGGAGCCTGCTGGCTCCTCACCAACAACGCAGGCAAGGGGACATaGGGCTCCCTAGAACAAAGCATCTCTTCCAAGCCAGTGACAGGG +
Preference number: 5 (lower is better)
Translates to: HGACWLLTNNAGKGT*GSLEQSISSKPVTG
Trigger: CCCTGTCACTGGCTTGGAAGAGATGCTTTGTTCTAGGGAGCCGCATGTCCCCTTGCCTGCGTTGTTGGTGAGGAGCCAGCAGGCTCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS-3UTR CAA 90 bp AGAGGGCAGTGGCCATGGAATAGCGCCGGGGCAAATATTGCAGCAGCAGCCAGGTTGGCTTTGGCAGCCTaGCGGATGATCACCTCTGCC +
Preference number: 5 (lower is better)
Translates to: RGQWPWNSAGANIAAAARLALAA*RMITSA
Trigger: GGCAGAGGTGATCATCCGCAAGGCTGCCAAAGCCAA...CCTGGCTGCTGCTGCAATATTTGCCCCGGCGCTATTCCATGGCCACTGCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448810.5
CDS TCA 90 bp GGCAGGTGTGTAACTCCTTGGTTAACTCTGCCATCCACCCACCACTaGCCGCCCTTGACAACTCTCTGGGCCTGGCTTTGGGCCCTCCAA +
Preference number: 5 (lower is better)
Translates to: GRCVTPWLTLPSTHH*PPLTTLWAWLWALQ
Trigger: TTGGAGGGCCCAAAGCCAGGCCCAGAGAGTTGTCAAGGGCGGTCAGTGGTGGGTGGATGGCAGAGTTAACCAAGGAGTTACACACCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 90 bp CAAGGGCCAGGCACACGCTTCTTCCTCAGTGCTGAGGTCCCCTGGTaGTCCAGAAGACAGACACCTTACCTGTCTGACAGCTGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: QGPGTRFFLSAEVPW*SRRQTPYLSDSCPE
Trigger: TTCAGGGCAGCTGTCAGACAGGTAAGGTGTCTGTCTTCTGGAGCACCAGGGGACCTCAGCACTGAGGAAGAAGCGTGTGCCTGGCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 90 bp AGGCACACTGCTGGTGCTCCGCTTTGGAATAAGCGTGAACCTGGATaGGCTGGGAGTAGGGTGGCAATCCCCAACCCAGGGAAGAACTGG +
Preference number: 5 (lower is better)
Translates to: RHTAGAPLWNKREPG*AGSRVAIPNPGKNW
Trigger: CCAGTTCTTCCCTGGGTTGGGGATTGCCACCCTACTCCCAGCCCATCCAGGTTCACGCTTATTCCAAAGCGGAGCACCAGCAGTGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 90 bp TACTCAGAAGTAATGCACTCAGAAGCTGTCCATCCCACAGGGCCCTaGGCCTTCCAAGGGGGCACAGACAGGCTTGAGGCAGGGCATTGG +
Preference number: 5 (lower is better)
Translates to: YSEVMHSEAVHPTGP*AFQGGTDRLEAGHW
Trigger: CCAATGCCCTGCCTCAAGCCTGTCTGTGCCCCCTTGGAAGGCCCAGGGCCCTGTGGGATGGACAGCTTCTGAGTGCATTACTTCTGAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 90 bp GGGCCACACTGCCTCTCATCAGGATGCCCTGCAGTACCCCTGACCTaGGCATCCCCAGTAGGCATTCTCTCTGTTGATGACCCACACTCT +
Preference number: 5 (lower is better)
Translates to: GPHCLSSGCPAVPLT*ASPVGILSVDDPHS
Trigger: AGAGTGTGGGTCATCAACAGAGAGAATGCCTACTGGGGATGCCCAGGTCAGGGGTACTGCAGGGCATCCTGATGAGAGGCAGTGTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS-3UTR CAA 90 bp AGTGGCCATGGAATAGCGCCGGGGCAAATATTGCAGCAGCAGCCAGGCCAACACGGCACAACAATCCCATaGGCTTTGGCAGCCTTGCGG +
Preference number: 5 (lower is better)
Translates to: SGHGIAPGQILQQQPGQHGTTIP*ALAALR
Trigger: CCGCAAGGCTGCCAAAGCCAATGGGATTGTTGTGCC...GTGTTGGCCTGGCTGCTGCTGCAATATTTGCCCCGGCGCTATTCCATGGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448810.5
CDS CCA 90 bp CCCATGGCTGGAGGGGGCATGGTGAACATGAGGAACCAGTGTGGTTaGCATCAGGCGTGCAATTCAAGAGTACAGTGGTGGCTAGGAGGC +
Preference number: 5 (lower is better)
Translates to: PMAGGGMVNMRNQCG*HQACNSRVQWWLGG
Trigger: GCCTCCTAGCCACCACTGTACTCTTGAATTGCACGCCTGATGCCAACCACACTGGTTCCTCATGTTCACCATGCCCCCTCCAGCCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 90 bp ACTCAGGGAATGGTGAACTGCCTGGAGGGATCCTGGGCCATTCCTTaGAAGCGGGTGACTCATAGCACTCCCTCAGTAGGCACAGTGGCT +
Preference number: 5 (lower is better)
Translates to: TQGMVNCLEGSWAIP*KRVTHSTPSVGTVA
Trigger: AGCCACTGTGCCTACTGAGGGAGTGCTATGAGTCACCCGCTTCCAAGGAATGGCCCAGGATCCCTCCAGGCAGTTCACCATTCCCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS-3UTR CAA 90 bp AGAGGGCAGTGGCCATGGAATAGCGCCGGGGCAAATATTGCAGCAGCAGCCAGGACAATCCCATTGGCTTaGGCAGCCTTGCGGATGATC +
Preference number: 5 (lower is better)
Translates to: RGQWPWNSAGANIAAAARTIPLA*AALRMI
Trigger: GATCATCCGCAAGGCTGCCAAAGCCAATGGGATTGT...CCTGGCTGCTGCTGCAATATTTGCCCCGGCGCTATTCCATGGCCACTGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448810.5
CDS-3UTR CAA 90 bp GCAGGAAGCGGTCGTAGGCACCAAGGTAAACGAAGTAGGGAGACAGGATGCTGCGCCGTGACTCCAAACTaGCCCACCATCACCAGGACT +
Preference number: 5 (lower is better)
Translates to: AGSGRRHQGKRSRETGCCAVTPN*PTITRT
Trigger: AGTCCTGGTGATGGTGGGCAAGTTTGGAGTCACGGC...GCAGCATCCTGTCTCCCTACTTCGTTTACCTTGGTGCCTACGACCGCTTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
CDS GCA 90 bp CACCACTCTCCGCACCTCTACCACACGGACTTTGTCCTGCTCCCATaGCTTTTCATGAGCCCCGGCTTTAGCACTTGCTATTCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: HHSPHLYHTDFVLLP*LFMSPGFSTCYSPC
Trigger: GCAGGGAGAATAGCAAGTGCTAAAGCCGGGGCTCATGAAAAGGCATGGGAGCAGGACAAAGTCCGTGTGGTAGAGGTGCGGAGAGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 90 bp TCTGGTAGGTGGGTAAGTATCCCTGCAGTGGCCCCCACCCACACATaGCTGCTAAATCTAGGACTGGGAGTGGAGGCGGAGAAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: SGRWVSIPAVAPTHT*LLNLGLGVEAEKKL
Trigger: CAGCTTTTTCTCCGCCTCCACTCCCAGTCCTAGATTTAGCAGCCATGTGTGGGTGGGGGCCACTGCAGGGATACTTACCCACCTACCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 90 bp GTCTTGAGGCCAACTCAGGGAATGGTGAACTGCCTGGAGGGATCCTaGGCCATTCCTTGGAAGCGGGTGACTCATAGCACTCCCTCAGTA +
Preference number: 5 (lower is better)
Translates to: VLRPTQGMVNCLEGS*AIPWKRVTHSTPSV
Trigger: TACTGAGGGAGTGCTATGAGTCACCCGCTTCCAAGGAATGGCCCAGGATCCCTCCAGGCAGTTCACCATTCCCTGAGTTGGCCTCAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS-3UTR CAA 90 bp CTGAGTGTGGGTGCCCATCCAGGAGCAAGTCAGACACAGGTCAAGAGGACAAACTTGGCTTTGGCAGCCTaGCGGATGATCACCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LSVGAHPGASQTQVKRTNLALAA*RMITSA
Trigger: GGCAGAGGTGATCATCCGCAAGGCTGCCAAAGCCAA...GTTTGTCCTCTTGACCTGTGTCTGACTTGCTCCTGGATGGGCACCCACACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CAA 90 bp AAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAAGCTGGCCAGCGCCGGGGCAAATATaGCAGCAGCAGCCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: KQQRPFVTEGLGVCTSWPAPGQI*QQQPGQ
Trigger: TTGGCCTGGCTGCTGCTGCAATATTTGCCCCGGCGC...TGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CAA 90 bp TCAATGGTGTCTGGGAGTGGGGTACCGAAGCTCTCTGGGAGAAACAAGGTGAGGGCCGTGACTCCAAACTaGCCCACCATCACCAGGACT +
Preference number: 5 (lower is better)
Translates to: SMVSGSGVPKLSGRNKVRAVTPN*PTITRT
Trigger: AGTCCTGGTGATGGTGGGCAAGTTTGGAGTCACGGC...CCTCACCTTGTTTCTCCCAGAGAGCTTCGGTACCCCACTCCCAGACACCATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
CDS TCA 90 bp TGCTCGGGTTCCCACCCTGGGCCAATGACCCCCGGGTCCTTTTTGTaGCCTTTAGAGCTGGAATCCCTGATGCTGCACACCAACTATACT +
Preference number: 5 (lower is better)
Translates to: CSGSHPGPMTPGSFL*PLELESLMLHTNYT
Trigger: AGTATAGTTGGTGTGCAGCATCAGGGATTCCAGCTCTAAAGGTCACAAAAAGGACCCGGGGGTCATTGGCCCAGGGTGGGAACCCGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS TCA 90 bp CGCACCTCTACCACACGGACTTTGTCCTGCTCCCATGCCTTTTCATaGGCCCCGGCTTTAGCACTTGCTATTCTCCCTGCCTGGATGTTC +
Preference number: 5 (lower is better)
Translates to: RTSTTRTLSCSHAFS*APALALAILPAWMF
Trigger: GAACATCCAGGCAGGGAGAATAGCAAGTGCTAAAGCCGGGGCTCATGAAAAGGCATGGGAGCAGGACAAAGTCCGTGTGGTAGAGGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 90 bp AGGAGAGCCTGGGTGAACACAAAAGTGGGTGACTCATCACAGGCTTaGATGTCTGTGGTGCAGGCTACATGCTGCTCCTGTCTTGAGGCC +
Preference number: 5 (lower is better)
Translates to: RRAWVNTKVGDSSQA*MSVVQATCCSCLEA
Trigger: GGCCTCAAGACAGGAGCAGCATGTAGCCTGCACCACAGACATGCAAGCCTGTGATGAGTCACCCACTTTTGTGTTCACCCAGGCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS-3UTR CAA 90 bp GGTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGCCTCACACATCAGTGCACTTaGCTGGTGATCTGCATCTGC +
Preference number: 5 (lower is better)
Translates to: GSPSVPRGRWCSRAICSLTHQCT*LVICIC
Trigger: GCAGATGCAGATCACCAGCAAAGTGCACTGATGTGT...GAGGCTACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS TCA 90 bp CTCCACCAAGTGGGGCTTTCTCAAGATCCATCCAGTAAGTGGGTGTaGACAGTGTTGCCAGAATACTGGCTGCCAGGGACAGTCTCGGTC +
Preference number: 5 (lower is better)
Translates to: LHQVGLSQDPSSKWV*TVLPEYWLPGTVSV
Trigger: GACCGAGACTGTCCCTGGCAGCCAGTATTCTGGCAACACTGTTCACACCCACTTACTGGATGGATCTTGAGAAAGCCCCACTTGGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 90 bp TGGGGCTTTCTCAAGATCCATCCAGTAAGTGGGTGTGAACAGTGTTaGCAGAATACTGGCTGCCAGGGACAGTCTCGGTCTCACAGTGCC +
Preference number: 5 (lower is better)
Translates to: WGFLKIHPVSGCEQC*QNTGCQGQSRSHSA
Trigger: GGCACTGTGAGACCGAGACTGTCCCTGGCAGCCAGTATTCTGGCAACACTGTTCACACCCACTTACTGGATGGATCTTGAGAAAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS-3UTR CAA 90 bp CTGAGTGTGGGTGCCCATCCAGGAGCAAGTCAGACACAGGTCAAGAGGACAAACACAATCCCATTGGCTTaGGCAGCCTTGCGGATGATC +
Preference number: 5 (lower is better)
Translates to: LSVGAHPGASQTQVKRTNTIPLA*AALRMI
Trigger: GATCATCCGCAAGGCTGCCAAAGCCAATGGGATTGT...GTTTGTCCTCTTGACCTGTGTCTGACTTGCTCCTGGATGGGCACCCACACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS TCA 90 bp TTCTCACAGGACTATCATGAGGTGAGGGTTGGGGACCCATATGGCTaGGCTAGACTAGCAATCCACGTGGGCTTCTGCAGTGAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: FSQDYHEVRVGDPYG*ARLAIHVGFCSEFW
Trigger: CCAGAACTCACTGCAGAAGCCCACGTGGATTGCTAGTCTAGCTCAGCCATATGGGTCCCCAACCCTCACCTCATGATAGTCCTGTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS TCA 90 bp ACGAACAGCACATTCTTCCGGCCAAACCTGGGAAGAAAAGGAGAGTaGCAGATAACCAGCTGGAAAAGGGCAGCAGGAATGGGCTCCACC +
Preference number: 5 (lower is better)
Translates to: TNSTFFRPNLGRKGE*QITSWKRAAGMGST
Trigger: GGTGGAGCCCATTCCTGCTGCCCTTTTCCAGCTGGTTATCTGTCACTCTCCTTTTCTTCCCAGGTTTGGCCGGAAGAATGTGCTGTTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 90 bp GGGGGCATGGTGAACATGAGGAACCAGTGTGGTTGGCATCAGGCGTaGAATTCAAGAGTACAGTGGTGGCTAGGAGGCAAATTGCACAAG +
Preference number: 5 (lower is better)
Translates to: GGMVNMRNQCGWHQA*NSRVQWWLGGKLHK
Trigger: CTTGTGCAATTTGCCTCCTAGCCACCACTGTACTCTTGAATTGCACGCCTGATGCCAACCACACTGGTTCCTCATGTTCACCATGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 90 bp ATCCATCCAGTAAGTGGGTGTGAACAGTGTTGCCAGAATACTGGCTaGCAGGGACAGTCTCGGTCTCACAGTGCCCATGCTATTTCTCCC +
Preference number: 5 (lower is better)
Translates to: IHPVSGCEQCCQNTG*QGQSRSHSAHAISP
Trigger: GGGAGAAATAGCATGGGCACTGTGAGACCGAGACTGTCCCTGGCAGCCAGTATTCTGGCAACACTGTTCACACCCACTTACTGGATGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS-3UTR CAA 90 bp AGCCTTGCGGATGATCACCTCTGCCTCTTCAAATCGTCCCTGAGAGATGAGCCAACAATCCCATTGGCTTaGGCAGCCTTGCGGATGATC +
Preference number: 5 (lower is better)
Translates to: SLADDHLCLFKSSLRDEPTIPLA*AALRMI
Trigger: GATCATCCGCAAGGCTGCCAAAGCCAATGGGATTGT...TGGCTCATCTCTCAGGGACGATTTGAAGAGGCAGAGGTGATCATCCGCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
CDS-3UTR CAA 90 bp GCAGGAAGCGGTCGTAGGCACCAAGGTAAACGAAGTAGGGAGACAGGATGCTGCTGGGACTGCTGCTTCTaGGAACTTAGGTCTTGTAAC +
Preference number: 5 (lower is better)
Translates to: AGSGRRHQGKRSRETGCCWDCCF*ELRSCN
Trigger: GTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCA...GCAGCATCCTGTCTCCCTACTTCGTTTACCTTGGTGCCTACGACCGCTTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447841.5
ENST00000448810.5
CDS-3UTR CAA 90 bp GCCCAGGCGGGATGCTGTGGAGCTGACTCCCACACCCATGTTTCTCACCACTGTGAAAAATTAACTGCTTaGGAGGTGCTGAGTCCATCA +
Preference number: 5 (lower is better)
Translates to: AQAGCCGADSHTHVSHHCEKLTA*EVLSPS
Trigger: TGATGGACTCAGCACCTCCAAAGCAGTTAATTTTTC...ACAGTGGTGAGAAACATGGGTGTGGGAGTCAGCTCCACAGCATCCCGCCTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447841.5
CDS GCA 90 bp CGCCTAGAATCCCAGGGTTCGGCCGCTGAGCAAAAGCTAGCGATGTaGACTTGGACATGTTTCCTCTCCCTGGTAATTCACAAATCCCTT +
Preference number: 5 (lower is better)
Translates to: RLESQGSAAEQKLAM*TWTCFLSLVIHKSL
Trigger: AAGGGATTTGTGAATTACCAGGGAGAGGAAACATGTCCAAGTGCACATCGCTAGCTTTTGCTCAGCGGCCGAACCCTGGGATTCTAGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS CCA 90 bp CAGATAACCAGCTGGAAAAGGGCAGCAGGAATGGGCTCCACCAAGTaGGGCTTTCTCAAGATCCATCCAGTAAGTGGGTGTGAACAGTGT +
Preference number: 5 (lower is better)
Translates to: QITSWKRAAGMGSTK*GFLKIHPVSGCEQC
Trigger: ACACTGTTCACACCCACTTACTGGATGGATCTTGAGAAAGCCCCACTTGGTGGAGCCCATTCCTGCTGCCCTTTTCCAGCTGGTTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS-3UTR CAA 90 bp TATTCCAGGTTCGAAGCAGATCCAGAATGTTGTGGGACTGCTGCTTCTTGGAACTTGGCTTTGGCAGCCTaGCGGATGATCACCTCTGCC +
Preference number: 5 (lower is better)
Translates to: YSRFEADPECCGTAASWNLALAA*RMITSA
Trigger: GGCAGAGGTGATCATCCGCAAGGCTGCCAAAGCCAA...GTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
CDS-3UTR CAA 90 bp AACTCACTCGGGTCAAAGATAGTGGAAGGCACAACAATCCCATTGGCTTTGGCAGGCACAACAATCCCATaGGCTTTGGCAGCCTTGCGG +
Preference number: 5 (lower is better)
Translates to: NSLGSKIVEGTTIPLALAGTTIP*ALAALR
Trigger: CCGCAAGGCTGCCAAAGCCAATGGGATTGTTGTGCC...TGCCAAAGCCAATGGGATTGTTGTGCCTTCCACTATCTTTGACCCGAGTGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
CDS GCA 90 bp TCATCTGCAGGTGGAACACACAGCTGGTACAATAAAAAGAGTATGTaGATGAGTCCCCAGGAAATCCAGAGCAGGGAGGAGAGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: SSAGGTHSWYNKKSM*MSPQEIQSREESLG
Trigger: ACCCAGGCTCTCCTCCCTGCTCTGGATTTCCTGGGGACTCATGCACATACTCTTTTTATTGTACCAGCTGTGTGTTCCACCTGCAGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS CCA 90 bp GTTCTATATGCCAACCAAGGGGTGGTTCCTAACCACAAGGCAGGCTaGTATAATCTCTATGCCCTTTCCCTTCCTAAGAGCTCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: VLYANQGVVPNHKAG*YNLYALSLPKSSLG
Trigger: TCCCAGGGAGCTCTTAGGAAGGGAAAGGGCATAGAGATTATACCAGCCTGCCTTGTGGTTAGGAACCACCCCTTGGTTGGCATATAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 90 bp AGAGTGCCACAAACAGGAGGAAAAAGTCAAGCTAGTGGGAAGCAGTaGGTTCAGTTTGAGTCTGGCCAGTACTGGCTGACACCCACTTTC +
Preference number: 5 (lower is better)
Translates to: RVPQTGGKSQASGKQ*VQFESGQYWLTPTF
Trigger: GAAAGTGGGTGTCAGCCAGTACTGGCCAGACTCAAACTGAACCCACTGCTTCCCACTAGCTTGACTTTTTCCTCCTGTTTGTGGCACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 90 bp GAATCCCAGGGTTCGGCCGCTGAGCAAAAGCTAGCGATGTGCACTTaGACATGTTTCCTCTCCCTGGTAATTCACAAATCCCTTTCTGAC +
Preference number: 5 (lower is better)
Translates to: ESQGSAAEQKLAMCT*TCFLSLVIHKSLSD
Trigger: GTCAGAAAGGGATTTGTGAATTACCAGGGAGAGGAAACATGTCCAAGTGCACATCGCTAGCTTTTGCTCAGCGGCCGAACCCTGGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS-3UTR CAA 90 bp GTCTTAAGAGCTCACACATCAGTGCACTTTGCTGGTGATCTGCATCTGCTCATTGCCGTGACTCCAAACTaGCCCACCATCACCAGGACT +
Preference number: 5 (lower is better)
Translates to: VLRAHTSVHFAGDLHLLIAVTPN*PTITRT
Trigger: AGTCCTGGTGATGGTGGGCAAGTTTGGAGTCACGGC...AATGAGCAGATGCAGATCACCAGCAAAGTGCACTGATGTGTGAGCTCTTAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CAA 90 bp GTAGCCCCAGTGTCCCTAGAGGAAGGTGGTGCTCTAGGGCCATATGTAGCCTCTCTGTGTTTCATTCCTTaGACTCTTAGCATCTGGTCA +
Preference number: 5 (lower is better)
Translates to: VAPVSLEEGGALGPYVASLCFIP*TLSIWS
Trigger: TGACCAGATGCTAAGAGTCAAAGGAATGAAACACAG...AGAGGCTACATATGGCCCTAGAGCACCACCTTCCTCTAGGGACACTGGGGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR CAA 90 bp CTGAGTGTGGGTGCCCATCCAGGAGCAAGTCAGACACAGGTCAAGAGGACAAACGACAAGCCCAGTGCTTaGATCAGATGTAAACAAGTC +
Preference number: 5 (lower is better)
Translates to: LSVGAHPGASQTQVKRTNDKPSA*IRCKQV
Trigger: GACTTGTTTACATCTGATCAAAGCACTGGGCTTGTC...GTTTGTCCTCTTGACCTGTGTCTGACTTGCTCCTGGATGGGCACCCACACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS TCA 90 bp GATTTGTGGGGTGTTCTCACATGTGTCATGTGGCCAAGGACTTGCTaGAGGCTGCTACTCTCTTCACAGTCTTCTCTGACAGACCCTGAA +
Preference number: 5 (lower is better)
Translates to: DLWGVLTCVMWPRTC*RLLLSSQSSLTDPE
Trigger: TTCAGGGTCTGTCAGAGAAGACTGTGAAGAGAGTAGCAGCCTTCAGCAAGTCCTTGGCCACATGACACATGTGAGAACACCCCACAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 90 bp CTGGTGAGAGCTCCTTTCACTTTGCAGAGAGAATGCTGGTCTTCTTaGGACTACAGAGGCAGACACCGTGGCACTACTACAGATCTACAA +
Preference number: 5 (lower is better)
Translates to: LVRAPFTLQRECWSS*DYRGRHRGTTTDLQ
Trigger: TTGTAGATCTGTAGTAGTGCCACGGTGTCTGCCTCTGTAGTCCCAAGAAGACCAGCATTCTCTCTGCAAAGTGAAAGGAGCTCTCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 90 bp AGGAACCAGTGTGGTTGGCATCAGGCGTGCAATTCAAGAGTACAGTaGTGGCTAGGAGGCAAATTGCACAAGGTCTTGCAACTATGTGGA +
Preference number: 5 (lower is better)
Translates to: RNQCGWHQACNSRVQ*WLGGKLHKVLQLCG
Trigger: TCCACATAGTTGCAAGACCTTGTGCAATTTGCCTCCTAGCCACCACTGTACTCTTGAATTGCACGCCTGATGCCAACCACACTGGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS TCA 90 bp CTTTCTTCCCCCAATTCCGACATCCAGCCCATCGGCAAGTCTTGTTaGTTTTACCTCTTACCACTTCCCTCCATTTCTACCACCGTCATG +
Preference number: 5 (lower is better)
Translates to: LSSPNSDIQPIGKSC*FYLLPLPSISTTVM
Trigger: CATGACGGTGGTAGAAATGGAGGGAAGTGGTAAGAGGTAAAATCAACAAGACTTGCCGATGGGCTGGATGTCGGAATTGGGGGAAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 90 bp GTGACCATCCGGATATTCCAGGTTCGAAGCAGATCCAGAATGTTGTaGGACTGCTGCTTCTTGGAACTTAGGTCTTGTAACTGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: VTIRIFQVRSRSRML*DCCFLELRSCNCRN
Trigger: GTTCCTGCAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGAATATCCGGATGGTCAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447841.5
CDS CCA 90 bp AACCAGTGTGGTTGGCATCAGGCGTGCAATTCAAGAGTACAGTGGTaGCTAGGAGGCAAATTGCACAAGGTCTTGCAACTATGTGGAAGA +
Preference number: 5 (lower is better)
Translates to: NQCGWHQACNSRVQW*LGGKLHKVLQLCGR
Trigger: TCTTCCACATAGTTGCAAGACCTTGTGCAATTTGCCTCCTAGCCACCACTGTACTCTTGAATTGCACGCCTGATGCCAACCACACTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS-3UTR CAA 90 bp AAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAAAACAGCAAAGGCCTTTaGTCACTGAAGGACTCGGAG +
Preference number: 5 (lower is better)
Translates to: KRTNSKGLLSLKDSESAQNSKGL*SLKDSE
Trigger: CTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTT...TTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS GCA 90 bp GAGCACATCCCACTTCCACATTTCCAGAAAGTAACTGGCAGCCTCTaGAGCCTACAGGACATGGTGTCTTCACTCAGATCCTTCTTAAAA +
Preference number: 5 (lower is better)
Translates to: EHIPLPHFQKVTGSL*SLQDMVSSLRSFLK
Trigger: TTTTAAGAAGGATCTGAGTGAAGACACCATGTCCTGTAGGCTGCAGAGGCTGCCAGTTACTTTCTGGAAATGTGGAAGTGGGATGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS GCA 90 bp CGGATATTCCAGGTTCGAAGCAGATCCAGAATGTTGTGGGACTGCTaGTTCTTGGAACTTAGGTCTTGTAACTCTCATAGTCACGAGACC +
Preference number: 5 (lower is better)
Translates to: RIFQVRSRSRMLWDC*FLELRSCNSHSHET
Trigger: GGTCTCGTGACTATGAGAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGAATATCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479605.5
CDS-3UTR CAA 90 bp CTTTCCCAAGTGCATTCTGAAGGGCAAATAACAAGGAGAAAAGGATACAACAACGGCACAACAATCCCATaGGCTTTGGCAGCCTTGCGG +
Preference number: 5 (lower is better)
Translates to: LSQVHSEGQITRRKGYNNGTTIP*ALAALR
Trigger: CCGCAAGGCTGCCAAAGCCAATGGGATTGTTGTGCC...GTTGTTGTATCCTTTTCTCCTTGTTATTTGCCCTTCAGAATGCACTTGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CAA 90 bp GTCTTAAGAGCTCACACATCAGTGCACTTTGCTGGTGATCTGCATCTGCTCATTAACAGCAAAGGCCTTTaGTCACTGAAGGACTCGGAG +
Preference number: 5 (lower is better)
Translates to: VLRAHTSVHFAGDLHLLINSKGL*SLKDSE
Trigger: CTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTT...AATGAGCAGATGCAGATCACCAGCAAAGTGCACTGATGTGTGAGCTCTTAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CAA 90 bp AAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAAGCTGGCCAGAAAAATTAACTGCTTaGGAGGTGCTGAGTCCATCA +
Preference number: 5 (lower is better)
Translates to: KQQRPFVTEGLGVCTSWPEKLTA*EVLSPS
Trigger: TGATGGACTCAGCACCTCCAAAGCAGTTAATTTTTC...TGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR CAA 90 bp GGTCAAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACCCACATTACAGCTTaGAGAGAAAAGACAACGTTG +
Preference number: 5 (lower is better)
Translates to: GQEDKQQRPFVTEGLGVCTHITA*REKTTL
Trigger: CAACGTTGTCTTTTCTCTCAAAGCTGTAATGTGGGT...GCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS TCA 90 bp CAAATATGCATTAACACTTCTTTCCTATTGGCCGCAGGGGGTCTGTaGGCAGGATCAGGAAAGGTGCTAGGTCTCAAAACTGAACACAAG +
Preference number: 5 (lower is better)
Translates to: QICINTSFLLAAGGL*AGSGKVLGLKTEHK
Trigger: CTTGTGTTCAGTTTTGAGACCTAGCACCTTTCCTGATCCTGCTCACAGACCCCCTGCGGCCAATAGGAAAGAAGTGTTAATGCATATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS TCA 90 bp CGTCATGCTAGGCCATGCCACCATCATCTCTGGCATGAACTACTGTaGCAACCTTTTAATTGGTCTCTCTACAACACCTTTTGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: RHARPCHHHLWHELL*QPFNWSLYNTFCFP
Trigger: AGGGAAGCAAAAGGTGTTGTAGAGAGACCAATTAAAAGGTTGTCACAGTAGTTCATGCCAGAGATGATGGTGGCATGGCCTAGCATGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 90 bp ATCCGGATATTCCAGGTTCGAAGCAGATCCAGAATGTTGTGGGACTaGTGCTTCTTGGAACTTAGGTCTTGTAACTCTCATAGTCACGAG +
Preference number: 5 (lower is better)
Translates to: IRIFQVRSRSRMLWD*CFLELRSCNSHSHE
Trigger: CTCGTGACTATGAGAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGAATATCCGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479605.5
CDS CCA 90 bp CGGGAACTAAATGACCCAAATTGGGCAAGGATTCATCTTAAGATCTaGAGAGATTCCCCACAAGAGTCCATATTTCCCACAACAGCCTCC +
Preference number: 5 (lower is better)
Translates to: RELNDPNWARIHLKI*RDSPQESIFPTTAS
Trigger: GGAGGCTGTTGTGGGAAATATGGACTCTTGTGGGGAATCTCTCCAGATCTTAAGATGAATCCTTGCCCAATTTGGGTCATTTAGTTCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS CCA 90 bp GTGACCATCCGGATATTCCAGGTTCGAAGCAGATCCAGAATGTTGTaGGACTGCTGCTTCTTGGAACTTAGGTCTTGTAACTCTCATAGT +
Preference number: 5 (lower is better)
Translates to: VTIRIFQVRSRSRML*DCCFLELRSCNSHS
Trigger: ACTATGAGAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGAATATCCGGATGGTCAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479605.5
CDS-3UTR CAA 90 bp GCAGATCCAGAATGTTGTGGGACTGCTGCTTCTTGGAACTTAGGTCTTGTAACTTGGGACTGCTGCTTCTaGGAACTTAGGTCTTGTAAC +
Preference number: 5 (lower is better)
Translates to: ADPECCGTAASWNLGLVTWDCCF*ELRSCN
Trigger: GTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCA...AGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437841.6
CDS-3UTR CAA 90 bp CAGCAAAGGCCTTTTGTCACTGAAGGACTCGGAGTCTGCACAAGCTGGCCATTTACATCCTTGTGTGACTaGGAGTTTTTCTGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: QQRPFVTEGLGVCTSWPFTSLCD*EFFCVS
Trigger: TGAAACACAGAAAAACTCCAAGTCACACAAGGATGT...AAATGGCCAGCTTGTGCAGACTCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR CAA 90 bp TCTTTCCTCTTCAGTTTCTCCCTTACTGGAAGCGATGTTAGAAGGCTGTGCTTTTGGGACTGCTGCTTCTaGGAACTTAGGTCTTGTAAC +
Preference number: 5 (lower is better)
Translates to: SFLFSFSLTGSDVRRLCFWDCCF*ELRSCN
Trigger: GTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCA...AAAGCACAGCCTTCTAACATCGCTTCCAGTAAGGGAGAAACTGAAGAGGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447841.5
CDS TCA 90 bp GAGTATCAAGCGAAAGCCCAAAATAGCCCACTGATATGGTCATCCTaGAACAGAGTGCAGAAGAAAGCTGGAAAAGCAGTATCCACATCT +
Preference number: 5 (lower is better)
Translates to: EYQAKAQNSPLIWSS*NRVQKKAGKAVSTS
Trigger: AGATGTGGATACTGCTTTTCCAGCTTTCTTCTGCACTCTGTTTCAGGATGACCATATCAGTGGGCTATTTTGGGCTTTCGCTTGATACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS-3UTR CAA 90 bp TCCTTTAAACCATACATAAGACGCTATAGTAGCAAGGAGGTTTCCACAGCAGTGTGGGACTGCTGCTTCTaGGAACTTAGGTCTTGTAAC +
Preference number: 5 (lower is better)
Translates to: SFKPYIRRYSSKEVSTAVWDCCF*ELRSCN
Trigger: GTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCA...CACTGCTGTGGAAACCTCCTTGCTACTATAGCGTCTTATGTATGGTTTAAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CAA 90 bp GACACAGGTCAAGAGGACAAACAGCAAAGGCCTTTTGTCACTGAAGGACTCGGACATCTTTTAACATCCTaGTGTGACTTGGAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: DTGQEDKQQRPFVTEGLGHLLTS*CDLEFF
Trigger: GAAAAACTCCAAGTCACACAAGGATGTTAAAAGATG...TCCGAGTCCTTCAGTGACAAAAGGCCTTTGCTGTTTGTCCTCTTGACCTGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245407.8
ENST00000447841.5
CDS-3UTR CAA 90 bp GTCTTAAGAGCTCACACATCAGTGCACTTTGCTGGTGATCTGCATCTGCTCATTACATCCTTGTGTGACTaGGAGTTTTTCTGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: VLRAHTSVHFAGDLHLLITSLCD*EFFCVS
Trigger: TGAAACACAGAAAAACTCCAAGTCACACAAGGATGT...AATGAGCAGATGCAGATCACCAGCAAAGTGCACTGATGTGTGAGCTCTTAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS-3UTR CAA 90 bp TTCAATGGAGCATTTATTATGAGCCTGGACAAGCCCAGTGCTTTGATCAGATGTCATCTTTTAACATCCTaGTGTGACTTGGAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: FNGAFIMSLDKPSALIRCHLLTS*CDLEFF
Trigger: GAAAAACTCCAAGTCACACAAGGATGTTAAAAGATG...ACATCTGATCAAAGCACTGGGCTTGTCCAGGCTCATAATAAATGCTCCATTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS TCA 90 bp AGTCAGACGCATAAAGATAACTCAATAGTGTTACATAAAGGGCTTTaGCAACCCAGGAGTACTTTAATTGCTCTTGAATTTCAGACATAT +
Preference number: 5 (lower is better)
Translates to: SQTHKDNSIVLHKGL*QPRSTLIALEFQTY
Trigger: ATATGTCTGAAATTCAAGAGCAATTAAAGTACTCCTGGGTTGTCAAAGCCCTTTATGTAACACTATTGAGTTATCTTTATGCGTCTGACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 90 bp GTCCTGCCGCGGCTGGCCTTACATAGGGCGCACGACCAGGGAAGGTaGCGGGCCTGGGCCGCAAGGCGCGCCCCGCTGGCAGGCAGAGCG +
Preference number: 6 (lower is better)
Translates to: VLPRLALHRAHDQGR*RAWAARRAPLAGRA
Trigger: CGCTCTGCCTGCCAGCGGGGCGCGCCTTGCGGCCCAGGCCCGCAACCTTCCCTGGTCGTGCGCCCTATGTAAGGCCAGCCGCGGCAGGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS GCA 72 bp GGCTGGCCTTACATAGGGCGCACGACCAGGGAAGGTTaGGGGCCTGGGCCGCAAGGCGCGCCCCGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: GWPYIGRTTREG*GPGPQGAPRWQ
Trigger: CTGCCAGCGGGGCGCGCCTTGCGGCCCAGGCCCGCAACCTTCCCTGGTCGTGCGCCCTATGTAAGGCCAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS CAA 72 bp CGGCTGGCCTTACATAGGGCGCACGACCAGGGAAGGTaGCGGGCCTGGGCCGCAAGGCGCGCCCCGCTGGCA +
Preference number: 6 (lower is better)
Translates to: RLALHRAHDQGR*RAWAARRAPLA
Trigger: TGCCAGCGGGGCGCGCCTTGCGGCCCAGGCCCGCAACCTTCCCTGGTCGTGCGCCCTATGTAAGGCCAGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS CCA 72 bp TTACATAGGGCGCACGACCAGGGAAGGTTGCGGGCCTaGGCCGCAAGGCGCGCCCCGCTGGCAGGCAGAGCG +
Preference number: 6 (lower is better)
Translates to: LHRAHDQGRLRA*AARRAPLAGRA
Trigger: CGCTCTGCCTGCCAGCGGGGCGCGCCTTGCGGCCCAGGCCCGCAACCTTCCCTGGTCGTGCGCCCTATGTAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS CAA 72 bp CCGCGGAGGGTAGGCTCGCGAGCTGACACCGCCGCCTaGGTCCTGCCGCGGCTGGCCTTACATAGGGCGCAC +
Preference number: 6 (lower is better)
Translates to: PRRVGSRADTAA*VLPRLALHRAH
Trigger: GTGCGCCCTATGTAAGGCCAGCCGCGGCAGGACCAAGGCGGCGGTGTCAGCTCGCGAGCCTACCCTCCGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS CAA 90 bp CAAGACCGTCCGCGGAGGGTAGGCTCGCGAGCTGACACCGCCGCCTaGGTCCTGCCGCGGCTGGCCTTACATAGGGCGCACGACCAGGGA +
Preference number: 6 (lower is better)
Translates to: QDRPRRVGSRADTAA*VLPRLALHRAHDQG
Trigger: TCCCTGGTCGTGCGCCCTATGTAAGGCCAGCCGCGGCAGGACCAAGGCGGCGGTGTCAGCTCGCGAGCCTACCCTCCGCGGACGGTCTTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS CCA 72 bp CGCGAGCTGACACCGCCGCCTTGGTCCTGCCGCGGCTaGCCTTACATAGGGCGCACGACCAGGGAAGGTTGC +
Preference number: 6 (lower is better)
Translates to: RELTPPPWSCRG*PYIGRTTREGC
Trigger: GCAACCTTCCCTGGTCGTGCGCCCTATGTAAGGCCAGCCGCGGCAGGACCAAGGCGGCGGTGTCAGCTCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245407.8
CDS CCA 72 bp GCACCTCTCAGAGGGGTTGGCAGGCAACCCTCAGGCTaGACACGGAGAACTCCCGCAGCAGGCACACTGCTG +
Preference number: 6 (lower is better)
Translates to: APLRGVGRQPSG*TRRTPAAGTLL
Trigger: CAGCAGTGTGCCTGCTGCGGGAGTTCTCCGTGTCCAGCCTGAGGGTTGCCTGCCAACCCCTCTGAGAGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 72 bp GCTGGTCAGAGACAGCTGACACCAGCCCCGCGGTACTaGTGGAGCACAGAGGTGGCTCCCAATGGAGGGGCC +
Preference number: 6 (lower is better)
Translates to: AGQRQLTPAPRY*WSTEVAPNGGA
Trigger: GGCCCCTCCATTGGGAGCCACCTCTGTGCTCCACAAGTACCGCGGGGCTGGTGTCAGCTGTCTCTGACCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS GCA 72 bp GGAGCACAGAGGTGGCTCCCAATGGAGGGGCCACACTaGCTCTCATCAGGATGCCCTGCAGTACCCCTGACC +
Preference number: 6 (lower is better)
Translates to: GAQRWLPMEGPH*LSSGCPAVPLT
Trigger: GGTCAGGGGTACTGCAGGGCATCCTGATGAGAGGCAGTGTGGCCCCTCCATTGGGAGCCACCTCTGTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS CCA 72 bp CCCGCGGTACTTGTGGAGCACAGAGGTGGCTCCCAATaGAGGGGCCACACTGCCTCTCATCAGGATGCCCTG +
Preference number: 6 (lower is better)
Translates to: PAVLVEHRGGSQ*RGHTASHQDAL
Trigger: CAGGGCATCCTGATGAGAGGCAGTGTGGCCCCTCCATTGGGAGCCACCTCTGTGCTCCACAAGTACCGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS CCA 72 bp GGTCAGAGACAGCTGACACCAGCCCCGCGGTACTTGTaGAGCACAGAGGTGGCTCCCAATGGAGGGGCCACA +
Preference number: 6 (lower is better)
Translates to: GQRQLTPAPRYL*STEVAPNGGAT
Trigger: TGTGGCCCCTCCATTGGGAGCCACCTCTGTGCTCCACAAGTACCGCGGGGCTGGTGTCAGCTGTCTCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS CCA 72 bp CCAGGGCTGTGGAAGAGGCAGGGCACCCTCGCTCAGTaGGGTTCAGGCCATTGGCATGAACGTCACTGGAGT +
Preference number: 6 (lower is better)
Translates to: PGLWKRQGTLAQ*GSGHWHERHWS
Trigger: ACTCCAGTGACGTTCATGCCAATGGCCTGAACCCCACTGAGCGAGGGTGCCCTGCCTCTTCCACAGCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 72 bp GCACCATCTGGACCTGCTCTGCTCGGGTTCCCACCCTaGGCCAATGACCCCCGGGTCCTTTTTGTGACCTTT +
Preference number: 6 (lower is better)
Translates to: APSGPALLGFPP*ANDPRVLFVTF
Trigger: AAAGGTCACAAAAAGGACCCGGGGGTCATTGGCCCAGGGTGGGAACCCGAGCAGAGCAGGTCCAGATGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 72 bp AGGCAGGGCACCCTCGCTCAGTGGGGTTCAGGCCATTaGCATGAACGTCACTGGAGTGGTTCTGGAAGCAGG +
Preference number: 6 (lower is better)
Translates to: RQGTLAQWGSGH*HERHWSGSGSR
Trigger: CCTGCTTCCAGAACCACTCCAGTGACGTTCATGCCAATGGCCTGAACCCCACTGAGCGAGGGTGCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 72 bp AACTCCCGCAGCAGGCACACTGCTGGTGCTCCGCTTTaGAATAAGCGTGAACCTGGATGGGCTGGGAGTAGG +
Preference number: 6 (lower is better)
Translates to: NSRSRHTAGAPL*NKREPGWAGSR
Trigger: CCTACTCCCAGCCCATCCAGGTTCACGCTTATTCCAAAGCGGAGCACCAGCAGTGTGCCTGCTGCGGGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 72 bp GCTCAGTGGGGTTCAGGCCATTGGCATGAACGTCACTaGAGTGGTTCTGGAAGCAGGGCTCTGGGGCTCTAC +
Preference number: 6 (lower is better)
Translates to: AQWGSGHWHERH*SGSGSRALGLY
Trigger: GTAGAGCCCCAGAGCCCTGCTTCCAGAACCACTCCAGTGACGTTCATGCCAATGGCCTGAACCCCACTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 90 bp CCCCATGGCTGGAGGGGGCATGGTGAACATGAGGAACCAGTGTGGTaGGCATCAGGCGTGCAATTCAAGAGTACAGTGGTGGCTAGGAGG +
Preference number: 6 (lower is better)
Translates to: PHGWRGHGEHEEPVW*ASGVQFKSTVVARR
Trigger: CCTCCTAGCCACCACTGTACTCTTGAATTGCACGCCTGATGCCAACCACACTGGTTCCTCATGTTCACCATGCCCCCTCCAGCCATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 90 bp CACAGGCTTGCATGTCTGTGGTGCAGGCTACATGCTGCTCCTGTCTaGAGGCCAACTCAGGGAATGGTGAACTGCCTGGAGGGATCCTGG +
Preference number: 6 (lower is better)
Translates to: HRLACLWCRLHAAPV*RPTQGMVNCLEGSW
Trigger: CCAGGATCCCTCCAGGCAGTTCACCATTCCCTGAGTTGGCCTCAAGACAGGAGCAGCATGTAGCCTGCACCACAGACATGCAAGCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS TCA 72 bp TCCCACCCTGGGCCAATGACCCCCGGGTCCTTTTTGTaGCCTTTAGAGCTGGAATCCCTGATGCTGCACACC +
Preference number: 6 (lower is better)
Translates to: SHPGPMTPGSFL*PLELESLMLHT
Trigger: GGTGTGCAGCATCAGGGATTCCAGCTCTAAAGGTCACAAAAAGGACCCGGGGGTCATTGGCCCAGGGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 72 bp CATCTCTTCCAAGCCAGTGACAGGGAAAAACAAGCCTaGTTCTCCGCACTGCTGGGCAGTGTGGGCGCACAG +
Preference number: 6 (lower is better)
Translates to: HLFQASDREKQA*FSALLGSVGAQ
Trigger: CTGTGCGCCCACACTGCCCAGCAGTGCGGAGAAGCAGGCTTGTTTTTCCCTGTCACTGGCTTGGAAGAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 72 bp GGCACACGCTTCTTCCTCAGTGCTGAGGTCCCCTGGTaGTCCAGAAGACAGACACCTTACCTGTCTGACAGC +
Preference number: 6 (lower is better)
Translates to: GTRFFLSAEVPW*SRRQTPYLSDS
Trigger: GCTGTCAGACAGGTAAGGTGTCTGTCTTCTGGAGCACCAGGGGACCTCAGCACTGAGGAAGAAGCGTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 72 bp TCCACTAAGCCCTGGTTGCTCATCTGCCCAGGGCTCTaGCTGCCTCTCCCCTTCATCTTAACACCACTCTCC +
Preference number: 6 (lower is better)
Translates to: STKPWLLICPGL*LPLPFILTPLS
Trigger: GGAGAGTGGTGTTAAGATGAAGGGGAGAGGCAGGCAGAGCCCTGGGCAGATGAGCAACCAGGGCTTAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 72 bp GGAATAAGCGTGAACCTGGATGGGCTGGGAGTAGGGTaGCAATCCCCAACCCAGGGAAGAACTGGAGCATCC +
Preference number: 6 (lower is better)
Translates to: GISVNLDGLGVG*QSPTQGRTGAS
Trigger: GGATGCTCCAGTTCTTCCCTGGGTTGGGGATTGCCACCCTACTCCCAGCCCATCCAGGTTCACGCTTATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 72 bp GCTTCAGACTCTGAGAAGACCACACACCCCCATGGCTaGAGGGGGCATGGTGAACATGAGGAACCAGTGTGG +
Preference number: 6 (lower is better)
Translates to: ASDSEKTTHPHG*RGHGEHEEPVW
Trigger: CCACACTGGTTCCTCATGTTCACCATGCCCCCTCCAGCCATGGGGGTGTGTGGTCTTCTCAGAGTCTGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 72 bp ATGGTGAACTGCCTGGAGGGATCCTGGGCCATTCCTTaGAAGCGGGTGACTCATAGCACTCCCTCAGTAGGC +
Preference number: 6 (lower is better)
Translates to: MVNCLEGSWAIP*KRVTHSTPSVG
Trigger: GCCTACTGAGGGAGTGCTATGAGTCACCCGCTTCCAAGGAATGGCCCAGGATCCCTCCAGGCAGTTCACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS TCA 72 bp GTAACTCCTTGGTTAACTCTGCCATCCACCCACCACTaGCCGCCCTTGACAACTCTCTGGGCCTGGCTTTGG +
Preference number: 6 (lower is better)
Translates to: VTPWLTLPSTHH*PPLTTLWAWLW
Trigger: CCAAAGCCAGGCCCAGAGAGTTGTCAAGGGCGGTCAGTGGTGGGTGGATGGCAGAGTTAACCAAGGAGTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS TCA 72 bp GGCATTCTTCTGAGCCGCAGCTGTCACTTAGCTCCGTaGGAAGGAATCTCCCATGTCCACTCAGGTGGCCTC +
Preference number: 6 (lower is better)
Translates to: GILLSRSCHLAP*EGISHVHSGGL
Trigger: GAGGCCACCTGAGTGGACATGGGAGATTCCTTCTCACGGAGCTAAGTGACAGCTGCGGCTCAGAAGAATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS TCA 72 bp AGCAGGGAGGAGAGCCTGGGTGAACACAAAAGTGGGTaGCTCATCACAGGCTTGCATGTCTGTGGTGCAGGC +
Preference number: 6 (lower is better)
Translates to: SREESLGEHKSG*LITGLHVCGAG
Trigger: GCCTGCACCACAGACATGCAAGCCTGTGATGAGTCACCCACTTTTGTGTTCACCCAGGCTCTCCTCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS GCA 72 bp TGCTGGCTCCTCACCAACAACGCAGGCAAGGGGACATaGGGCTCCCTAGAACAAAGCATCTCTTCCAAGCCA +
Preference number: 6 (lower is better)
Translates to: CWLLTNNAGKGT*GSLEQSISSKP
Trigger: TGGCTTGGAAGAGATGCTTTGTTCTAGGGAGCCGCATGTCCCCTTGCCTGCGTTGTTGGTGAGGAGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 72 bp TGGGGAAGCAGCCAGACGCTTGGATCTGGCTGCGCCTaGCTAAACAAGAGCCAAAAGCAGGAAGAAAGCCCA +
Preference number: 6 (lower is better)
Translates to: WGSSQTLGSGCA*LNKSQKQEESP
Trigger: TGGGCTTTCTTCCTGCTTTTGGCTCTTGTTTAGGCAGGCGCAGCCAGATCCAAGCGTCTGGCTGCTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 72 bp CTGGCTACTTTCGACTCATCTTCCCACTCTCGCTCATaGTTCACCTTCTCAGGGATGCTGCCCCTGACCTCC +
Preference number: 6 (lower is better)
Translates to: LATFDSSSHSRS*FTFSGMLPLTS
Trigger: GGAGGTCAGGGGCAGCATCCCTGAGAAGGTGAAGCATGAGCGAGAGTGGGAAGATGAGTCGAAAGTAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 72 bp CCAACTCAGGGAATGGTGAACTGCCTGGAGGGATCCTaGGCCATTCCTTGGAAGCGGGTGACTCATAGCACT +
Preference number: 6 (lower is better)
Translates to: PTQGMVNCLEGS*AIPWKRVTHST
Trigger: AGTGCTATGAGTCACCCGCTTCCAAGGAATGGCCCAGGATCCCTCCAGGCAGTTCACCATTCCCTGAGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS CCA 72 bp TGCCTCTCATCAGGATGCCCTGCAGTACCCCTGACCTaGGCATCCCCAGTAGGCATTCTCTCTGTTGATGAC +
Preference number: 6 (lower is better)
Translates to: CLSSGCPAVPLT*ASPVGILSVDD
Trigger: GTCATCAACAGAGAGAATGCCTACTGGGGATGCCCAGGTCAGGGGTACTGCAGGGCATCCTGATGAGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS CAA 72 bp GCATGTCTGTGGTGCAGGCTACATGCTGCTCCTGTCTaGAGGCCAACTCAGGGAATGGTGAACTGCCTGGAG +
Preference number: 6 (lower is better)
Translates to: ACLWCRLHAAPV*RPTQGMVNCLE
Trigger: CTCCAGGCAGTTCACCATTCCCTGAGTTGGCCTCAAGACAGGAGCAGCATGTAGCCTGCACCACAGACATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS TCA 72 bp ACCACACGGACTTTGTCCTGCTCCCATGCCTTTTCATaGGCCCCGGCTTTAGCACTTGCTATTCTCCCTGCC +
Preference number: 6 (lower is better)
Translates to: TTRTLSCSHAFS*APALALAILPA
Trigger: GGCAGGGAGAATAGCAAGTGCTAAAGCCGGGGCTCATGAAAAGGCATGGGAGCAGGACAAAGTCCGTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 72 bp CCGCACCTCTACCACACGGACTTTGTCCTGCTCCCATaGCTTTTCATGAGCCCCGGCTTTAGCACTTGCTAT +
Preference number: 6 (lower is better)
Translates to: PHLYHTDFVLLP*LFMSPGFSTCY
Trigger: ATAGCAAGTGCTAAAGCCGGGGCTCATGAAAAGGCATGGGAGCAGGACAAAGTCCGTGTGGTAGAGGTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 72 bp GTAAGTGGGTGTGAACAGTGTTGCCAGAATACTGGCTaGCAGGGACAGTCTCGGTCTCACAGTGCCCATGCT +
Preference number: 6 (lower is better)
Translates to: VSGCEQCCQNTG*QGQSRSHSAHA
Trigger: AGCATGGGCACTGTGAGACCGAGACTGTCCCTGGCAGCCAGTATTCTGGCAACACTGTTCACACCCACTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 72 bp AGCTCCGTGAGAAGGAATCTCCCATGTCCACTCAGGTaGCCTCTAAGCATAGCACAATCCTCCCCCAGTTCC +
Preference number: 6 (lower is better)
Translates to: SSVRRNLPCPLR*PLSIAQSSPSS
Trigger: GGAACTGGGGGAGGATTGTGCTATGCTTAGAGGCCACCTGAGTGGACATGGGAGATTCCTTCTCACGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 72 bp GGAGGGGGCATGGTGAACATGAGGAACCAGTGTGGTTaGCATCAGGCGTGCAATTCAAGAGTACAGTGGTGG +
Preference number: 6 (lower is better)
Translates to: GGGMVNMRNQCG*HQACNSRVQWW
Trigger: CCACCACTGTACTCTTGAATTGCACGCCTGATGCCAACCACACTGGTTCCTCATGTTCACCATGCCCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 72 bp CAAGCTTCAGGGGCCAGGACCTGGCTCCTGCCACTCTaGAGTATGATGGGCTCTATTTCCCAGCTAGCATGT +
Preference number: 6 (lower is better)
Translates to: QASGARTWLLPL*SMMGSISQLAC
Trigger: ACATGCTAGCTGGGAAATAGAGCCCATCATACTCAAGAGTGGCAGGAGCCAGGTCCTGGCCCCTGAAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS TCA 72 bp CTCCAGAAGTCGCCTAGAATCCCAGGGTTCGGCCGCTaGGCAAAAGCTAGCGATGTGCACTTGGACATGTTT +
Preference number: 6 (lower is better)
Translates to: LQKSPRIPGFGR*AKASDVHLDMF
Trigger: AAACATGTCCAAGTGCACATCGCTAGCTTTTGCTCAGCGGCCGAACCCTGGGATTCTAGGCGACTTCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS GCA 72 bp AAGACATGGGGAAGCAGCCAGACGCTTGGATCTGGCTaGGCCTGCCTAAACAAGAGCCAAAAGCAGGAAGAA +
Preference number: 6 (lower is better)
Translates to: KTWGSSQTLGSG*ACLNKSQKQEE
Trigger: TTCTTCCTGCTTTTGGCTCTTGTTTAGGCAGGCGCAGCCAGATCCAAGCGTCTGGCTGCTTCCCCATGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 72 bp TCCCAGGGTTCGGCCGCTGAGCAAAAGCTAGCGATGTaGACTTGGACATGTTTCCTCTCCCTGGTAATTCAC +
Preference number: 6 (lower is better)
Translates to: SQGSAAEQKLAM*TWTCFLSLVIH
Trigger: GTGAATTACCAGGGAGAGGAAACATGTCCAAGTGCACATCGCTAGCTTTTGCTCAGCGGCCGAACCCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS CCA 72 bp CTGGTGAGAGCTCCTTTCACTTTGCAGAGAGAATGCTaGTCTTCTTGGGACTACAGAGGCAGACACCGTGGC +
Preference number: 6 (lower is better)
Translates to: LVRAPFTLQREC*SSWDYRGRHRG
Trigger: GCCACGGTGTCTGCCTCTGTAGTCCCAAGAAGACCAGCATTCTCTCTGCAAAGTGAAAGGAGCTCTCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 72 bp AGCTGGAAAAGGGCAGCAGGAATGGGCTCCACCAAGTaGGGCTTTCTCAAGATCCATCCAGTAAGTGGGTGT +
Preference number: 6 (lower is better)
Translates to: SWKRAAGMGSTK*GFLKIHPVSGC
Trigger: ACACCCACTTACTGGATGGATCTTGAGAAAGCCCCACTTGGTGGAGCCCATTCCTGCTGCCCTTTTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 72 bp TGGAGGGGGCATGGTGAACATGAGGAACCAGTGTGGTaGGCATCAGGCGTGCAATTCAAGAGTACAGTGGTG +
Preference number: 6 (lower is better)
Translates to: WRGHGEHEEPVW*ASGVQFKSTVV
Trigger: CACCACTGTACTCTTGAATTGCACGCCTGATGCCAACCACACTGGTTCCTCATGTTCACCATGCCCCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS TCA 72 bp GTGGGGCTTTCTCAAGATCCATCCAGTAAGTGGGTGTaGACAGTGTTGCCAGAATACTGGCTGCCAGGGACA +
Preference number: 6 (lower is better)
Translates to: VGLSQDPSSKWV*TVLPEYWLPGT
Trigger: TGTCCCTGGCAGCCAGTATTCTGGCAACACTGTTCACACCCACTTACTGGATGGATCTTGAGAAAGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 72 bp TTCATGAGCCCCGGCTTTAGCACTTGCTATTCTCCCTaGCTGGATGTTCTTTCTCCTCTCTACCCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: FMSPGFSTCYSP*LDVLSPLYPSA
Trigger: AGCTGAGGGGTAGAGAGGAGAAAGAACATCCAGGCAGGGAGAATAGCAAGTGCTAAAGCCGGGGCTCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 72 bp TGGGTGAACACAAAAGTGGGTGACTCATCACAGGCTTaGATGTCTGTGGTGCAGGCTACATGCTGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: WVNTKVGDSSQA*MSVVQATCCSC
Trigger: ACAGGAGCAGCATGTAGCCTGCACCACAGACATGCAAGCCTGTGATGAGTCACCCACTTTTGTGTTCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS CAA 90 bp CACCGATTTGTGGGGTGTTCTCACATGTGTCATGTGGCCAAGGACTaGCTGAAGGCTGCTACTCTCTTCACAGTCTTCTCTGACAGACCC +
Preference number: 6 (lower is better)
Translates to: HRFVGCSHMCHVAKD*LKAATLFTVFSDRP
Trigger: GGGTCTGTCAGAGAAGACTGTGAAGAGAGTAGCAGCCTTCAGCAAGTCCTTGGCCACATGACACATGTGAGAACACCCCACAAATCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 90 bp GCTGGTGAGAGCTCCTTTCACTTTGCAGAGAGAATGCTGGTCTTCTaGGGACTACAGAGGCAGACACCGTGGCACTACTACAGATCTACA +
Preference number: 6 (lower is better)
Translates to: AGESSFHFAERMLVF*GLQRQTPWHYYRST
Trigger: TGTAGATCTGTAGTAGTGCCACGGTGTCTGCCTCTGTAGTCCCAAGAAGACCAGCATTCTCTCTGCAAAGTGAAAGGAGCTCTCACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS TCA 72 bp ATGGTGCTCAGTAGTAACCTTTGCAGACTTCTCACATaGGCAACCACCCTCCTAGGAACTCAGACCCTTGCC +
Preference number: 6 (lower is better)
Translates to: MVLSSNLCRLLT*ATTLLGTQTLA
Trigger: GGCAAGGGTCTGAGTTCCTAGGAGGGTGGTTGCTCATGTGAGAAGTCTGCAAAGGTTACTACTGAGCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 72 bp CTGAACACAAGGGCAAACATAGATTGGGTCCCAGCCTaGCAATCCGTCCACATATCTGTCAACCACCAGATG +
Preference number: 6 (lower is better)
Translates to: LNTRANIDWVPA*QSVHISVNHQM
Trigger: CATCTGGTGGTTGACAGATATGTGGACGGATTGGCAGGCTGGGACCCAATCTATGTTTGCCCTTGTGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 72 bp GATTGCTTGAGGCCAGGAATTAAAAACCAGGGAAGATaGTGGGACTCCTTTCCACCGGCTAACCCACCGATT +
Preference number: 6 (lower is better)
Translates to: DCLRPGIKNQGR*WDSFPPANPPI
Trigger: AATCGGTGGGTTAGCCGGTGGAAAGGAGTCCCAGCATCTTCCCTGGTTTTTAATTCCTGGCCTCAAGCAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 72 bp GTGAACATGAGGAACCAGTGTGGTTGGCATCAGGCGTaGAATTCAAGAGTACAGTGGTGGCTAGGAGGCAAA +
Preference number: 6 (lower is better)
Translates to: VNMRNQCGWHQA*NSRVQWWLGGK
Trigger: TTTGCCTCCTAGCCACCACTGTACTCTTGAATTGCACGCCTGATGCCAACCACACTGGTTCCTCATGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 72 bp CCACTTCCACATTTCCAGAAAGTAACTGGCAGCCTCTaGAGCCTACAGGACATGGTGTCTTCACTCAGATCC +
Preference number: 6 (lower is better)
Translates to: PLPHFQKVTGSL*SLQDMVSSLRS
Trigger: GGATCTGAGTGAAGACACCATGTCCTGTAGGCTGCAGAGGCTGCCAGTTACTTTCTGGAAATGTGGAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS CCA 72 bp TGCTTGAGGCCAGGAATTAAAAACCAGGGAAGATGCTaGGACTCCTTTCCACCGGCTAACCCACCGATTTGT +
Preference number: 6 (lower is better)
Translates to: CLRPGIKNQGRC*DSFPPANPPIC
Trigger: ACAAATCGGTGGGTTAGCCGGTGGAAAGGAGTCCCAGCATCTTCCCTGGTTTTTAATTCCTGGCCTCAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 72 bp GGTTACTTAATGGGGAGAGAGAGAGGATGCTGTAATTaGGATGGGGCACATGGACAGGGCTTCTTAGTGGAC +
Preference number: 6 (lower is better)
Translates to: GYLMGRERGCCN*DGAHGQGFLVD
Trigger: GTCCACTAAGAAGCCCTGTCCATGTGCCCCATCCCAATTACAGCATCCTCTCTCTCTCCCCATTAAGTAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 72 bp GGACAGGTCTCCCAATATCAGGCTTCTAAAGACTCCTaGGCTGGCAAGGTTGGGTGTGACCTAAAACCAGGT +
Preference number: 6 (lower is better)
Translates to: GQVSQYQASKDS*AGKVGCDLKPG
Trigger: ACCTGGTTTTAGGTCACACCCAACCTTGCCAGCCAAGGAGTCTTTAGAAGCCTGATATTGGGAGACCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 90 bp GGAAAGGTGCTAGGTCTCAAAACTGAACACAAGGGCAAACATAGATaGGGTCCCAGCCTGCCAATCCGTCCACATATCTGTCAACCACCA +
Preference number: 6 (lower is better)
Translates to: GKVLGLKTEHKGKHR*GPSLPIRPHICQPP
Trigger: TGGTGGTTGACAGATATGTGGACGGATTGGCAGGCTGGGACCCAATCTATGTTTGCCCTTGTGTTCAGTTTTGAGACCTAGCACCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 72 bp GGTTGGCATCAGGCGTGCAATTCAAGAGTACAGTGGTaGCTAGGAGGCAAATTGCACAAGGTCTTGCAACTA +
Preference number: 6 (lower is better)
Translates to: GWHQACNSRVQW*LGGKLHKVLQL
Trigger: TAGTTGCAAGACCTTGTGCAATTTGCCTCCTAGCCACCACTGTACTCTTGAATTGCACGCCTGATGCCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 72 bp TGTGGTTGGCATCAGGCGTGCAATTCAAGAGTACAGTaGTGGCTAGGAGGCAAATTGCACAAGGTCTTGCAA +
Preference number: 6 (lower is better)
Translates to: CGWHQACNSRVQ*WLGGKLHKVLQ
Trigger: TTGCAAGACCTTGTGCAATTTGCCTCCTAGCCACCACTGTACTCTTGAATTGCACGCCTGATGCCAACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CCA 72 bp CAAACAGGAGGAAAAAGTCAAGCTAGTGGGAAGCAGTaGGTTCAGTTTGAGTCTGGCCAGTACTGGCTGACA +
Preference number: 6 (lower is better)
Translates to: QTGGKSQASGKQ*VQFESGQYWLT
Trigger: TGTCAGCCAGTACTGGCCAGACTCAAACTGAACCCACTGCTTCCCACTAGCTTGACTTTTTCCTCCTGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 90 bp ATGGTGACCATCCGGATATTCCAGGTTCGAAGCAGATCCAGAATGTaGTGGGACTGCTGCTTCTTGGAACTTAGGTCTTGTAACTGCAGG +
Preference number: 6 (lower is better)
Translates to: MVTIRIFQVRSRSRM*WDCCFLELRSCNCR
Trigger: CCTGCAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGAATATCCGGATGGTCACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447841.5
CDS CAA 90 bp GCTTTCTTCCCCCAATTCCGACATCCAGCCCATCGGCAAGTCTTGTaGATTTTACCTCTTACCACTTCCCTCCATTTCTACCACCGTCAT +
Preference number: 6 (lower is better)
Translates to: AFFPQFRHPAHRQVL*ILPLTTSLHFYHRH
Trigger: ATGACGGTGGTAGAAATGGAGGGAAGTGGTAAGAGGTAAAATCAACAAGACTTGCCGATGGGCTGGATGTCGGAATTGGGGGAAGAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS TCA 72 bp ATTAACACTTCTTTCCTATTGGCCGCAGGGGGTCTGTaGGCAGGATCAGGAAAGGTGCTAGGTCTCAAAACT +
Preference number: 6 (lower is better)
Translates to: INTSFLLAAGGL*AGSGKVLGLKT
Trigger: AGTTTTGAGACCTAGCACCTTTCCTGATCCTGCTCACAGACCCCCTGCGGCCAATAGGAAAGAAGTGTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS TCA 72 bp CCCAATTCCGACATCCAGCCCATCGGCAAGTCTTGTTaGTTTTACCTCTTACCACTTCCCTCCATTTCTACC +
Preference number: 6 (lower is better)
Translates to: PNSDIQPIGKSC*FYLLPLPSIST
Trigger: GGTAGAAATGGAGGGAAGTGGTAAGAGGTAAAATCAACAAGACTTGCCGATGGGCTGGATGTCGGAATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS GCA 72 bp CAGGTTCGAAGCAGATCCAGAATGTTGTGGGACTGCTaGTTCTTGGAACTTAGGTCTTGTAACTGCAGGAAC +
Preference number: 6 (lower is better)
Translates to: QVRSRSRMLWDC*FLELRSCNCRN
Trigger: GTTCCTGCAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447841.5
CDS GCA 72 bp TTCCAGGTTCGAAGCAGATCCAGAATGTTGTGGGACTaGTGCTTCTTGGAACTTAGGTCTTGTAACTGCAGG +
Preference number: 6 (lower is better)
Translates to: FQVRSRSRMLWD*CFLELRSCNCR
Trigger: CCTGCAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447841.5
CDS CCA 72 bp GGGAAGCAGTGGGTTCAGTTTGAGTCTGGCCAGTACTaGCTGACACCCACTTTCATTCAATGTTTATTGAGC +
Preference number: 6 (lower is better)
Translates to: GKQWVQFESGQY*LTPTFIQCLLS
Trigger: GCTCAATAAACATTGAATGAAAGTGGGTGTCAGCCAGTACTGGCCAGACTCAAACTGAACCCACTGCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 72 bp CTAGGTCTCAAAACTGAACACAAGGGCAAACATAGATaGGGTCCCAGCCTGCCAATCCGTCCACATATCTGT +
Preference number: 6 (lower is better)
Translates to: LGLKTEHKGKHR*GPSLPIRPHIC
Trigger: ACAGATATGTGGACGGATTGGCAGGCTGGGACCCAATCTATGTTTGCCCTTGTGTTCAGTTTTGAGACCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 72 bp CCCCAATTCCGACATCCAGCCCATCGGCAAGTCTTGTaGATTTTACCTCTTACCACTTCCCTCCATTTCTAC +
Preference number: 6 (lower is better)
Translates to: PQFRHPAHRQVL*ILPLTTSLHFY
Trigger: GTAGAAATGGAGGGAAGTGGTAAGAGGTAAAATCAACAAGACTTGCCGATGGGCTGGATGTCGGAATTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 72 bp TTCCCCCAATTCCGACATCCAGCCCATCGGCAAGTCTaGTTGATTTTACCTCTTACCACTTCCCTCCATTTC +
Preference number: 6 (lower is better)
Translates to: FPQFRHPAHRQV*LILPLTTSLHF
Trigger: GAAATGGAGGGAAGTGGTAAGAGGTAAAATCAACAAGACTTGCCGATGGGCTGGATGTCGGAATTGGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 90 bp ATGGTGACCATCCGGATATTCCAGGTTCGAAGCAGATCCAGAATGTaGTGGGACTGCTGCTTCTTGGAACTTAGGTCTTGTAACTCTCAT +
Preference number: 6 (lower is better)
Translates to: MVTIRIFQVRSRSRM*WDCCFLELRSCNSH
Trigger: ATGAGAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGAATATCCGGATGGTCACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479605.5
CDS CAA 72 bp AAAACAGGGATTGGGGTAAGGAATAGGCTGCACCGCTaGAGTTTCCAGCTTCCAATGTGTGGTTCCATCTAT +
Preference number: 6 (lower is better)
Translates to: KTGIGVRNRLHR*SFQLPMCGSIY
Trigger: ATAGATGGAACCACACATTGGAAGCTGGAAACTCAAGCGGTGCAGCCTATTCCTTACCCCAATCCCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 90 bp CCCATTTGTAAAACAGGGATTGGGGTAAGGAATAGGCTGCACCGCTaGAGTTTCCAGCTTCCAATGTGTGGTTCCATCTATAGTTACCAT +
Preference number: 6 (lower is better)
Translates to: PICKTGIGVRNRLHR*SFQLPMCGSIYSYH
Trigger: ATGGTAACTATAGATGGAACCACACATTGGAAGCTGGAAACTCAAGCGGTGCAGCCTATTCCTTACCCCAATCCCTGTTTTACAAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS TCA 72 bp GCGAAAGCCCAAAATAGCCCACTGATATGGTCATCCTaGAACAGAGTGCAGAAGAAAGCTGGAAAAGCAGTA +
Preference number: 6 (lower is better)
Translates to: AKAQNSPLIWSS*NRVQKKAGKAV
Trigger: TACTGCTTTTCCAGCTTTCTTCTGCACTCTGTTTCAGGATGACCATATCAGTGGGCTATTTTGGGCTTTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS GCA 72 bp CAGGTTCGAAGCAGATCCAGAATGTTGTGGGACTGCTaGTTCTTGGAACTTAGGTCTTGTAACTCTCATAGT +
Preference number: 6 (lower is better)
Translates to: QVRSRSRMLWDC*FLELRSCNSHS
Trigger: ACTATGAGAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479605.5
CDS GCA 72 bp TTCCAGGTTCGAAGCAGATCCAGAATGTTGTGGGACTaGTGCTTCTTGGAACTTAGGTCTTGTAACTCTCAT +
Preference number: 6 (lower is better)
Translates to: FQVRSRSRMLWD*CFLELRSCNSH
Trigger: ATGAGAGTTACAAGACCTAAGTTCCAAGAAGCAGCAGTCCCACAACATTCTGGATCTGCTTCGAACCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479605.5
CDS CAA 72 bp ACCCTTTACATAGCACCAGTCCTTGGCAGTTCAGGGTaGGGGCCAGAAATGTTTGCTTTTAAAGTCTGTCAA +
Preference number: 6 (lower is better)
Translates to: TLYIAPVLGSSG*GPEMFAFKVCQ
Trigger: TTGACAGACTTTAAAAGCAAACATTTCTGGCCCCAACCCTGAACTGCCAAGGACTGGTGCTATGTAAAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 72 bp TGCAATTCAAGAGTACAGTGGTGGCTAGGAGGCAAATaGCACAAGGTCTTGCAACTATGTGGAAGAGTTTGG +
Preference number: 6 (lower is better)
Translates to: CNSRVQWWLGGK*HKVLQLCGRVW
Trigger: CCAAACTCTTCCACATAGTTGCAAGACCTTGTGCAATTTGCCTCCTAGCCACCACTGTACTCTTGAATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS TCA 72 bp GTTAGGAGTATCAAGCGAAAGCCCAAAATAGCCCACTaGTATGGTCATCCACAGCATTATGGACATGATGGT +
Preference number: 6 (lower is better)
Translates to: VRSIKRKPKIAH*YGHPQHYGHDG
Trigger: ACCATCATGTCCATAATGCTGTGGATGACCATATCAGTGGGCTATTTTGGGCTTTCGCTTGATACTCCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245407.8
ENST00000435065.6
ENST00000461013.5
ENST00000479605.5
CDS TCA 72 bp AGGCCATGCCACCATCATCTCTGGCATGAACTACTGTaGCAACCTTTTAATTGGTCTCTCTACAACACCTTT +
Preference number: 6 (lower is better)
Translates to: RPCHHHLWHELL*QPFNWSLYNTF
Trigger: AAAGGTGTTGTAGAGAGACCAATTAAAAGGTTGTCACAGTAGTTCATGCCAGAGATGATGGTGGCATGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS TCA 72 bp ATTCCAACCTGCCTTTCAGCTTTAAAAATCCTAAGCTaGACCTCCTCAAATCCAGCAACTGCAGAAGGAGCT +
Preference number: 6 (lower is better)
Translates to: IPTCLSALKILS*TSSNPATAEGA
Trigger: AGCTCCTTCTGCAGTTGCTGGATTTGAGGAGGTTCAGCTTAGGATTTTTAAAGCTGAAAGGCAGGTTGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS CCA 72 bp AATGACCCAAATTGGGCAAGGATTCATCTTAAGATCTaGAGAGATTCCCCACAAGAGTCCATATTTCCCACA +
Preference number: 6 (lower is better)
Translates to: NDPNWARIHLKI*RDSPQESIFPT
Trigger: TGTGGGAAATATGGACTCTTGTGGGGAATCTCTCCAGATCTTAAGATGAATCCTTGCCCAATTTGGGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS CAA 72 bp CACAAGAGTCCATATTTCCCACAACAGCCTCCACAATaGTTTTCATTCTCCTTTTCTGAGGTTCCATCCCAT +
Preference number: 6 (lower is better)
Translates to: HKSPYFPQQPPQ*FSFSFSEVPSH
Trigger: ATGGGATGGAACCTCAGAAAAGGAGAATGAAAACAATTGTGGAGGCTGTTGTGGGAAATATGGACTCTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS TCA 72 bp ACAACAGCCTCCACAATTGTTTTCATTCTCCTTTTCTaGGGTTCCATCCCATTAAGAATTGTGACATGCCCA +
Preference number: 6 (lower is better)
Translates to: TTASTIVFILLF*GSIPLRIVTCP
Trigger: TGGGCATGTCACAATTCTTAATGGGATGGAACCTCAGAAAAGGAGAATGAAAACAATTGTGGAGGCTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475308.1
CDS CCA 72 bp TTACAGCTGAAAGTCCTGAGCTTGGAGGTAAGAAACTaGGTTTTAGCTCCCACTCTACTATTAAAACTCTTC +
Preference number: 6 (lower is better)
Translates to: LQLKVLSLEVRN*VLAPTLLLKLF
Trigger: GAAGAGTTTTAATAGTAGAGTGGGAGCTAAAACCCAGTTTCTTACCTCCAAGCTCAGGACTTTCAGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 90 bp CAGCTCAGGTTTCTTTACTTAGCAAGAATTACGGAGTCAGATTTGTaGGCTCTTCTTACTAGGCATGGAGTCTATATCACAGACATAGCT +
Preference number: 6 (lower is better)
Translates to: QLRFLYLARITESDL*ALLTRHGVYITDIA
Trigger: AGCTATGTCTGTGATATAGACTCCATGCCTAGTAAGAAGAGCCAACAAATCTGACTCCGTAATTCTTGCTAAGTAAAGAAACCTGAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 90 bp AGACAGCTCAGGTTTCTTTACTTAGCAAGAATTACGGAGTCAGATTaGTTGGCTCTTCTTACTAGGCATGGAGTCTATATCACAGACATA +
Preference number: 6 (lower is better)
Translates to: RQLRFLYLARITESD*LALLTRHGVYITDI
Trigger: TATGTCTGTGATATAGACTCCATGCCTAGTAAGAAGAGCCAACAAATCTGACTCCGTAATTCTTGCTAAGTAAAGAAACCTGAGCTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 90 bp ACACACTCACAAATTTTGTTTCCAGTTTCCCTGGGAATAGACCTTTaGGAACTTAAATGCTTTCCTCAGGTAATCATTGTGTCACATGGC +
Preference number: 6 (lower is better)
Translates to: THSQILFPVSLGIDL*ELKCFPQVIIVSHG
Trigger: GCCATGTGACACAATGATTACCTGAGGAAAGCATTTAAGTTCCAAAAGGTCTATTCCCAGGGAAACTGGAAACAAAATTTGTGAGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 72 bp GGGTCTCATAGTCACCCCAAATTTAGTACACACAAATaGAACTCAATATCCATGAACGTGGTTCTTTTCCAG +
Preference number: 6 (lower is better)
Translates to: GSHSHPKFSTHK*NSISMNVVLFQ
Trigger: CTGGAAAAGAACCACGTTCATGGATATTGAGTTCAATTTGTGTGTACTAAATTTGGGGTGACTATGAGACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 72 bp AGGTTTCTTTACTTAGCAAGAATTACGGAGTCAGATTaGTTGGCTCTTCTTACTAGGCATGGAGTCTATATC +
Preference number: 6 (lower is better)
Translates to: RFLYLARITESD*LALLTRHGVYI
Trigger: GATATAGACTCCATGCCTAGTAAGAAGAGCCAACAAATCTGACTCCGTAATTCTTGCTAAGTAAAGAAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 72 bp CAGTACTGGCTGACACCCACTTTCATTCAATGTTTATaGAGCATCTATTATAGAGGGCACTTGGATATCAAT +
Preference number: 6 (lower is better)
Translates to: QYWLTPTFIQCL*SIYYRGHLDIN
Trigger: ATTGATATCCAAGTGCCCTCTATAATAGATGCTCAATAAACATTGAATGAAAGTGGGTGTCAGCCAGTACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 90 bp GAGTCTGGCCAGTACTGGCTGACACCCACTTTCATTCAATGTTTATaGAGCATCTATTATAGAGGGCACTTGGATATCAATAAATTAAAA +
Preference number: 6 (lower is better)
Translates to: ESGQYWLTPTFIQCL*SIYYRGHLDINKLK
Trigger: TTTTAATTTATTGATATCCAAGTGCCCTCTATAATAGATGCTCAATAAACATTGAATGAAAGTGGGTGTCAGCCAGTACTGGCCAGACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 72 bp TTTCTTTACTTAGCAAGAATTACGGAGTCAGATTTGTaGGCTCTTCTTACTAGGCATGGAGTCTATATCACA +
Preference number: 6 (lower is better)
Translates to: FLYLARITESDL*ALLTRHGVYIT
Trigger: TGTGATATAGACTCCATGCCTAGTAAGAAGAGCCAACAAATCTGACTCCGTAATTCTTGCTAAGTAAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461013.5
CDS CAA 72 bp CAAATTTTGTTTCCAGTTTCCCTGGGAATAGACCTTTaGGAACTTAAATGCTTTCCTCAGGTAATCATTGTG +
Preference number: 6 (lower is better)
Translates to: QILFPVSLGIDL*ELKCFPQVIIV
Trigger: CACAATGATTACCTGAGGAAAGCATTTAAGTTCCAAAAGGTCTATTCCCAGGGAAACTGGAAACAAAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461013.5