Pregenerated sensors for SLC22A4 (Homo sapiens)
Ensembl gene IDs: ENSG00000197208Ensembl transcript IDs: ENST00000200652.4, ENST00000425923.1, ENST00000491257.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTaGGTGTCAATCGTTACAGTCAGTCCATTTCAGTGGGAACAACGA | + |
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Preference number: 2 (lower is better) Translates to: QSLLYDEHFLIARFI*VSIVTVSPFQWEQR Trigger: TCGTTGTTCCCACTGAAATGGACTGACTGTAACGATTGACACCAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| 3UTR CAA 90 bp | TTATCTGGAAGAATCATCCAGAGTTTACTGTATGACGAGCATTTCTaGATAGCAAGGTTCATTTTGGTGTCAATCGTTACAGTCAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: LSGRIIQSLLYDEHF*IARFILVSIVTVSP Trigger: TGGACTGACTGTAACGATTGACACCAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGATTCTTCCAGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| 3UTR-3UTR CCA 90 bp | AGAATCATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTGTCAGTCCATTTCAGTaGGAACAACGAATTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: RIIQSLLYDEHFLIARFIVSPFQ*EQRISP Trigger: TGGAGAAATTCGTTGTTCCCACTGAAATGGACTGAC...AATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| 3UTR-3UTR CAA 90 bp | CTCTCTAGAAATGGTTGGTTTGTAAAGCAAGGACATTATCTGGAAGAATCATCCTATGACGAGCATTTCTaGATAGCAAGGTTCATTTTG | + |
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Preference number: 3 (lower is better) Translates to: LSRNGWFVKQGHYLEESSYDEHF*IARFIL Trigger: CAAAATGAACCTTGCTATCAAGAAATGCTCGTCATA...GGATGATTCTTCCAGATAATGTCCTTGCTTTACAAACCAACCATTTCTAGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| 3UTR TCA 72 bp | GACATTATCTGGAAGAATCATCCAGAGTTTACTGTATaGCGAGCATTTCTTGATAGCAAGGTTCATTTTGGT | + |
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Preference number: 3 (lower is better) Translates to: DIIWKNHPEFTV*RAFLDSKVHFG Trigger: ACCAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGATTCTTCCAGATAATGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR GCA 90 bp | CTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGGTGTCAATCGTTACAGGCACTCGACAGCGGTaGTCCGGGGTCCCCGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LYDEHFLIARFILVSIVTGTRQR*SGVPAR Trigger: CCTGGCGGGGACCCCGGAGCACCGCTGTCGAGTGCC...TGTAACGATTGACACCAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR TCA 90 bp | AGCAAGGTTCATTTTGGTGTCAATCGTTACAGTCAGTCCATTTCAGTGGGAACATGGAGGCCGTGGATGTaGCCCCCACCGCCATGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SKVHFGVNRYSQSISVGTWRPWM*PPPPCS Trigger: GGAACATGGCGGTGGGGGTCACATCCACGGCCTCCA...TGTTCCCACTGAAATGGACTGACTGTAACGATTGACACCAAAATGAACCTTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR GCA 90 bp | ATCATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGTCCAGGCAGCTCTCCTaGTCCAGCTGCCCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: IIQSLLYDEHFLIARFILSRQLS*SSCPRS Trigger: GGACCTGGGGCAGCTGGAGCAGGAGAGCTGCCTGGA...CAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR TCA 90 bp | ATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGGTGTCCTGGGAAACAGGCTaGAGGCGTTGGAGCGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: IQSLLYDEHFLIARFILVSWETG*RRWSVP Trigger: GGGAACGCTCCAACGCCTTCAGCCTGTTTCCCAGGA...CACCAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR GCA 90 bp | AGTCAGTCCATTTCAGTGGGAACAACGAATTTCTCCACAGGGTCTTATTTTTCTCCGCATGCTTCCCACTaGCGCTCCGAAACTTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: SQSISVGTTNFSTGSYFSPHASH*RSETCN Trigger: GTTGCAAGTTTCGGAGCGGCAGTGGGAAGCATGCGG...AGAAAAATAAGACCCTGTGGAGAAATTCGTTGTTCCCACTGAAATGGACTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR GCA 90 bp | ATCATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGCGTCGTAGTCCCGCATaGTTCCCACTGCCGCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: IIQSLLYDEHFLIARFILRRSPA*FPLPLR Trigger: TCGGAGCGGCAGTGGGAAGCATGCGGGACTACGACG...CAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR CCA 90 bp | CTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGGTGTCAATCGTTACACAGGCTGTTAGAAATTaGGGCGCGAAGCCGGGGACC | + |
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Preference number: 4 (lower is better) Translates to: LYDEHFLIARFILVSIVTQAVRN*GAKPGT Trigger: GGTCCCCGGCTTCGCGCCCCAATTTCTAACAGCCTG...TGTAACGATTGACACCAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR TCA 90 bp | ATCATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGCCTGCCAAACCTGTCTaGCAGCTGCCCGGACACGAA | + |
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Preference number: 4 (lower is better) Translates to: IIQSLLYDEHFLIARFILPAKPV*QLPGHE Trigger: TTCGTGTCCGGGCAGCTGTCAGACAGGTTTGGCAGG...CAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR TCA 90 bp | CTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGGTGTCAATCGTTACAGGGGAGATTCAGGAATaGACCACCACAGCGGGACAC | + |
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Preference number: 4 (lower is better) Translates to: LYDEHFLIARFILVSIVTGEIQE*TTTAGH Trigger: GTGTCCCGCTGTGGTGGTTCATTCCTGAATCTCCCC...TGTAACGATTGACACCAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR TCA 90 bp | AGCAAGGTTCATTTTGGTGTCAATCGTTACAGTCAGTCCATTTCAGTGGGAACAACAGTACTGCAGCTATaGTATAACGCCTGGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SKVHFGVNRYSQSISVGTTVLQL*YNAWAG Trigger: CCCTGCCCAGGCGTTATATCATAGCTGCAGTACTGT...TGTTCCCACTGAAATGGACTGACTGTAACGATTGACACCAAAATGAACCTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR TCA 90 bp | ATCATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGCCACCGCCATGTTCCTaGCCAGGGTTGGGTAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: IIQSLLYDEHFLIARFILPPPCS*PGLGRA Trigger: AGCTCTACCCAACCCTGGTCAGGAACATGGCGGTGG...CAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR TCA 90 bp | CTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGGTGTCAATCGTTACACAAAGTAGGGGGCAATaGTGCTGCCCACTCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LYDEHFLIARFILVSIVTQSRGQ*CCPLWR Trigger: CCTCCAGAGTGGGCAGCATCATTGCCCCCTACTTTG...TGTAACGATTGACACCAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR CCA 90 bp | AGTCAGTCCATTTCAGTGGGAACAACGAATTTCTCCACAGGGTCTTATTTTTCTACAGTGTCTTGTAGCTaGGGCGCTCCCCAAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: SQSISVGTTNFSTGSYFSTVSCS*GAPQGC Trigger: ACATCCTTGGGGAGCGCCCCAGCTACAAGACACTGT...AGAAAAATAAGACCCTGTGGAGAAATTCGTTGTTCCCACTGAAATGGACTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR TCA 90 bp | AGTCAGTCCATTTCAGTGGGAACAACGAATTTCTCCACAGGGTCTTATTTTTCTCGCCAGGAACACGACTaGCATACCATTGAAGCCATT | + |
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Preference number: 4 (lower is better) Translates to: SQSISVGTTNFSTGSYFSRQEHD*HTIEAI Trigger: AATGGCTTCAATGGTATGTCAGTCGTGTTCCTGGCG...AGAAAAATAAGACCCTGTGGAGAAATTCGTTGTTCCCACTGAAATGGACTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR TCA 90 bp | AGTCAGTCCATTTCAGTGGGAACAACGAATTTCTCCACAGGGTCTTATTTTTCTAAATCTGCAGGAAGCTaGAGCCAGTCTGTACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SQSISVGTTNFSTGSYFSKSAGS*SQSVQP Trigger: TGGCTGTACAGACTGGCTTCAGCTTCCTGCAGATTT...AGAAAAATAAGACCCTGTGGAGAAATTCGTTGTTCCCACTGAAATGGACTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR TCA 90 bp | AGCAAGGTTCATTTTGGTGTCAATCGTTACAGTCAGTCCATTTCAGTGGGAACATGGAGAAAGCAGAGGTaGTCCCAAATTTTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SKVHFGVNRYSQSISVGTWRKQR*SQIFPA Trigger: TGCTGGGAAAATTTGGGATCACCTCTGCTTTCTCCA...TGTTCCCACTGAAATGGACTGACTGTAACGATTGACACCAAAATGAACCTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR TCA 90 bp | CTCTCTAGAAATGGTTGGTTTGTAAAGCAAGGACATTATCTGGAAGAATCATCCCAGTCAGACTACCCATaGCGATGTAGGGCAGCATTC | + |
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Preference number: 4 (lower is better) Translates to: LSRNGWFVKQGHYLEESSQSDYP*RCRAAF Trigger: GAATGCTGCCCTACATCGTCATGGGTAGTCTGACTG...GGATGATTCTTCCAGATAATGTCCTTGCTTTACAAACCAACCATTTCTAGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR GCA 90 bp | AGCAAGGTTCATTTTGGTGTCAATCGTTACAGTCAGTCCATTTCAGTGGGAACAAGAGAACGTTCTTCCTaGCAAACCTGTCTGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: SKVHFGVNRYSQSISVGTRERSS*QTCLTA Trigger: AGCTGTCAGACAGGTTTGGCAGGAAGAACGTTCTCT...TGTTCCCACTGAAATGGACTGACTGTAACGATTGACACCAAAATGAACCTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR TCA 90 bp | ATCATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGCAGGTACCAGTTGAATaGAGAGAAGCACACCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: IIQSLLYDEHFLIARFILQVPVE*REAHLL Trigger: GAGGAGGTGTGCTTCTCTTCATTCAACTGGTACCTG...CAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR TCA 90 bp | ATCATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGGGTAGAGCTCAGCAGTaGAGACATACAGCATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: IIQSLLYDEHFLIARFILGRAQQ*RHTAWR Trigger: TCTCCATGCTGTATGTCTTCACTGCTGAGCTCTACC...CAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR GCA 90 bp | ATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGGTGCTGTACAGCCATGGTTaGGAAGAGAACGTTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: IQSLLYDEHFLIARFILVLYSHG*EENVLP Trigger: AGGAAGAACGTTCTCTTCGCAACCATGGCTGTACAG...CACCAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR CCA 90 bp | CTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGGTGTCAATCGTTACACAGTCTGTACAGCCATaGTTGCGAAGAGAACGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LYDEHFLIARFILVSIVTQSVQP*LRRERS Trigger: AGAACGTTCTCTTCGCAACCATGGCTGTACAGACTG...TGTAACGATTGACACCAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| 3UTR CAA 72 bp | CTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTaGGTGTCAATCGTTACAGTCAGTCCATTTCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: LYDEHFLIARFI*VSIVTVSPFQW Trigger: CCACTGAAATGGACTGACTGTAACGATTGACACCAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR GCA 90 bp | ATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGGTGTCCCCAGAACAGTACTaGAGCTATGATATAACGCCT | + |
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Preference number: 4 (lower is better) Translates to: IQSLLYDEHFLIARFILVSPEQY*SYDITP Trigger: AGGCGTTATATCATAGCTGCAGTACTGTTCTGGGGA...CACCAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR CCA 90 bp | AGTCAGTCCATTTCAGTGGGAACAACGAATTTCTCCACAGGGTCTTATTTTTCTGTCAGTCCATTTCAGTaGGAACAACGAATTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SQSISVGTTNFSTGSYFSVSPFQ*EQRISP Trigger: TGGAGAAATTCGTTGTTCCCACTGAAATGGACTGAC...AGAAAAATAAGACCCTGTGGAGAAATTCGTTGTTCCCACTGAAATGGACTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR TCA 90 bp | ATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGGTGTTTCTGTTCCTAGTATaGAGGCTACCACATAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: IQSLLYDEHFLIARFILVFLFLV*RLPHSW Trigger: CCAACTATGTGGTAGCCTTCATACTAGGAACAGAAA...CACCAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR TCA 90 bp | CTCTCTAGAAATGGTTGGTTTGTAAAGCAAGGACATTATCTGGAAGAATCATCCCCAGAGTTTACTGTATaGCGAGCATTTCTTGATAGC | + |
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Preference number: 4 (lower is better) Translates to: LSRNGWFVKQGHYLEESSPEFTV*RAFLDS Trigger: GCTATCAAGAAATGCTCGTCATACAGTAAACTCTGG...GGATGATTCTTCCAGATAATGTCCTTGCTTTACAAACCAACCATTTCTAGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR GCA 90 bp | ATCATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGATGAAAGCTTTCTGCTaGTTCAGGGGATTTAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: IIQSLLYDEHFLIARFILMKAFC*FRGFSS Trigger: GGAGCTAAATCCCCTGAAGCAGCAGAAAGCTTTCAT...CAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR CCA 90 bp | AGAATCATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTCTCTAAATCTTCTCTaGGATATCAGCCATCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: RIIQSLLYDEHFLIARFISLNLL*DISHRG Trigger: TCCCCGATGGCTGATATCCCAGAGAAGATTTAGAGA...AATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR GCA 90 bp | AGTCAGTCCATTTCAGTGGGAACAACGAATTTCTCCACAGGGTCTTATTTTTCTAACCATTTCACTTTCTaGATCTGCTCTAAGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SQSISVGTTNFSTGSYFSNHFTF*ICSKVS Trigger: AGAAACCTTAGAGCAGATGCAGAAAGTGAAATGGTT...AGAAAAATAAGACCCTGTGGAGAAATTCGTTGTTCCCACTGAAATGGACTGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR CCA 90 bp | ATCATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGGGCTGTAATGTAAGCTaGAATTTCAATCAAGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: IIQSLLYDEHFLIARFILGCNVS*NFNQGR Trigger: TCTGCCTTGATTGAAATTCCAGCTTACATTACAGCC...CAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR CCA 90 bp | CTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGGTGTCAATCGTTACACTCTCTAGAAATGGTTaGTTTGTAAAGCAAGGACAT | + |
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Preference number: 4 (lower is better) Translates to: LYDEHFLIARFILVSIVTLSRNG*FVKQGH Trigger: ATGTCCTTGCTTTACAAACCAACCATTTCTAGAGAG...TGTAACGATTGACACCAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| 3UTR CAA 72 bp | AGAATCATCCAGAGTTTACTGTATGACGAGCATTTCTaGATAGCAAGGTTCATTTTGGTGTCAATCGTTACA | + |
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Preference number: 4 (lower is better) Translates to: RIIQSLLYDEHF*IARFILVSIVT Trigger: TGTAACGATTGACACCAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR CCA 90 bp | CTCTCTAGAAATGGTTGGTTTGTAAAGCAAGGACATTATCTGGAAGAATCATCCATCAAATATCACTGCTaGTACAGCTATGTTGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: LSRNGWFVKQGHYLEESSIKYHC*YSYVVH Trigger: ATGAACAACATAGCTGTACCAGCAGTGATATTTGAT...GGATGATTCTTCCAGATAATGTCCTTGCTTTACAAACCAACCATTTCTAGAGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR CCA 90 bp | ATCATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGCAGTTATTAGAACCTTaGGATTTTCTTCTGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: IIQSLLYDEHFLIARFILQLLEP*DFLLSP Trigger: TGGAGACAGAAGAAAATCCCAAGGTTCTAATAACTG...CAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR GCA 90 bp | AGAATCATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTAGAATCAAATATCACTaGTGGTACAGCTATGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: RIIQSLLYDEHFLIARFIRIKYH*WYSYVV Trigger: AACAACATAGCTGTACCAGCAGTGATATTTGATTCT...AATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGATTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS GCA 90 bp | GAGGTCCCTGAGGGCCAGGGCTTCCAGCTGGGGTTTCGCCTTCTGTaGTTCCTTGCACCCAATGAGCCTCAGGAGGCCATCTGCTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: EVPEGQGFQLGFRLL*FLAPNEPQEAICCL Trigger: AAGACAGCAGATGGCCTCCTGAGGCTCATTGGGTGCAAGGAAGCACAGAAGGCGAAACCCCAGCTGGAAGCCCTGGCCCTCAGGGACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491257.1 |
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| CDS GCA 90 bp | GTAAGACCACTGGTAAATGTTCAGGGGGAGCACTCAGCTTGTCAGTaGTGGTCCCAGGCTGGCCTCTGTCTGGGGCAAGTCCTGTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: VRPLVNVQGEHSACQ*WSQAGLCLGQVLSL Trigger: CAGGGACAGGACTTGCCCCAGACAGAGGCCAGCCTGGGACCAGCACTGACAAGCTGAGTGCTCCCCCTGAACATTTACCAGTGGTCTTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425923.1 |
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| CDS-3UTR CAA 90 bp | AGAATCATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTAACAGGCTGAAGGCGTaGGAGCGTTCCCGGGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: RIIQSLLYDEHFLIARFINRLKA*ERSREL Trigger: GAGCTCCCGGGAACGCTCCAACGCCTTCAGCCTGTT...AATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR CAA 90 bp | ATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGGTGCTGCCGCTCCGAAACTaGCAACTACGGGTGATGACA | + |
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Preference number: 5 (lower is better) Translates to: IQSLLYDEHFLIARFILVLPLRN*QLRVMT Trigger: TGTCATCACCCGTAGTTGCAAGTTTCGGAGCGGCAG...CACCAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR CAA 90 bp | AGCAAGGTTCATTTTGGTGTCAATCGTTACAGTCAGTCCATTTCAGTGGGAACATCTGTACAGCCATGGTaGCGAAGAGAACGTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SKVHFGVNRYSQSISVGTSVQPW*RRERSS Trigger: GGAAGAACGTTCTCTTCGCAACCATGGCTGTACAGA...TGTTCCCACTGAAATGGACTGACTGTAACGATTGACACCAAAATGAACCTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS GCA 90 bp | ATGGCAATATTCCGAGTCCTGAACAGGTCCAGAATGAAAGCTTTCTaGTGCTTCAGGGGATTTAGCTCCTCCACAGAATCAAATATCACT | + |
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Preference number: 5 (lower is better) Translates to: MAIFRVLNRSRMKAF*CFRGFSSSTESNIT Trigger: AGTGATATTTGATTCTGTGGAGGAGCTAAATCCCCTGAAGCAGCAGAAAGCTTTCATTCTGGACCTGTTCAGGACTCGGAATATTGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR CAA 90 bp | AGCAAGGTTCATTTTGGTGTCAATCGTTACAGTCAGTCCATTTCAGTGGGAACAACGACTGACATACCATaGAAGCCATTGGGGATGATG | + |
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Preference number: 5 (lower is better) Translates to: SKVHFGVNRYSQSISVGTTTDIP*KPLGMM Trigger: CATCATCCCCAATGGCTTCAATGGTATGTCAGTCGT...TGTTCCCACTGAAATGGACTGACTGTAACGATTGACACCAAAATGAACCTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR CAA 90 bp | CTCTCTAGAAATGGTTGGTTTGTAAAGCAAGGACATTATCTGGAAGAATCATCCCATTTTTGCAGCTTTTaGGATGATATCTTCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: LSRNGWFVKQGHYLEESSHFCSF*DDIFSL Trigger: GAGGCTGAAGATATCATCCAAAAAGCTGCAAAAATG...GGATGATTCTTCCAGATAATGTCCTTGCTTTACAAACCAACCATTTCTAGAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR CAA 90 bp | ATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTTTGGTGGCTGGTACAGCTATGTaGTTCATTTTTGCAGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: IQSLLYDEHFLIARFILVAGTAM*FIFAAF Trigger: AAAAGCTGCAAAAATGAACAACATAGCTGTACCAGC...CACCAAAATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR CAA 90 bp | AGAATCATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTGCAGTTATTAGAACCTaGGGATTTTCTTCTGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RIIQSLLYDEHFLIARFIAVIRT*GFSSVS Trigger: GGAGACAGAAGAAAATCCCAAGGTTCTAATAACTGC...AATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS-3UTR CAA 90 bp | AGAATCATCCAGAGTTTACTGTATGACGAGCATTTCTTGATAGCAAGGTTCATTATAGCAAGGTTCATTTaGGTGTCAATCGTTACAGTC | + |
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Preference number: 5 (lower is better) Translates to: RIIQSLLYDEHFLIARFIIARFI*VSIVTV Trigger: GACTGTAACGATTGACACCAAAATGAACCTTGCTAT...AATGAACCTTGCTATCAAGAAATGCTCGTCATACAGTAAACTCTGGATGATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS GCA 72 bp | GAGGGCCAGGGCTTCCAGCTGGGGTTTCGCCTTCTGTaGTTCCTTGCACCCAATGAGCCTCAGGAGGCCATC | + |
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Preference number: 6 (lower is better) Translates to: EGQGFQLGFRLL*FLAPNEPQEAI Trigger: GATGGCCTCCTGAGGCTCATTGGGTGCAAGGAAGCACAGAAGGCGAAACCCCAGCTGGAAGCCCTGGCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491257.1 |
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| CDS CCA 72 bp | AGAACGTTCCCGGGGGACAGGCAGGCTGTTAGAAATTaGGGCGCGAAGCCGGGGACCGTTCCTGGGAAACAG | + |
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Preference number: 6 (lower is better) Translates to: RTFPGDRQAVRN*GAKPGTVPGKQ Trigger: CTGTTTCCCAGGAACGGTCCCCGGCTTCGCGCCCCAATTTCTAACAGCCTGCCTGTCCCCCGGGAACGTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS CCA 72 bp | CCCAGGCTGGCCTCTGTCTGGGGCAAGTCCTGTCCCTaGTACAGTATGCCCACAGCCAGGAGCATTCATGGA | + |
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Preference number: 6 (lower is better) Translates to: PRLASVWGKSCP*YSMPTARSIHG Trigger: TCCATGAATGCTCCTGGCTGTGGGCATACTGTACCAGGGACAGGACTTGCCCCAGACAGAGGCCAGCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425923.1 |
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| CDS CAA 72 bp | AGGGCTTCCAGCTGGGGTTTCGCCTTCTGTGCTTCCTaGCACCCAATGAGCCTCAGGAGGCCATCTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RASSWGFAFCAS*HPMSLRRPSAV Trigger: GACAGCAGATGGCCTCCTGAGGCTCATTGGGTGCAAGGAAGCACAGAAGGCGAAACCCCAGCTGGAAGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491257.1 |
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| CDS CAA 90 bp | CTGAGGGCCAGGGCTTCCAGCTGGGGTTTCGCCTTCTGTGCTTCCTaGCACCCAATGAGCCTCAGGAGGCCATCTGCTGTCTTAGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: LRARASSWGFAFCAS*HPMSLRRPSAVLEK Trigger: TTTCTCTAAGACAGCAGATGGCCTCCTGAGGCTCATTGGGTGCAAGGAAGCACAGAAGGCGAAACCCCAGCTGGAAGCCCTGGCCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491257.1 |
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| CDS CAA 72 bp | CGTAGTCCCGCATGCTTCCCACTGCCGCTCCGAAACTaGCAACTACGGGTGATGACAGCGTTCTCAGGACAG | + |
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Preference number: 6 (lower is better) Translates to: RSPACFPLPLRN*QLRVMTAFSGQ Trigger: CTGTCCTGAGAACGCTGTCATCACCCGTAGTTGCAAGTTTCGGAGCGGCAGTGGGAAGCATGCGGGACTACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS CAA 90 bp | TCACCTCGTCGTAGTCCCGCATGCTTCCCACTGCCGCTCCGAAACTaGCAACTACGGGTGATGACAGCGTTCTCAGGACAGTGTCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: SPRRSPACFPLPLRN*QLRVMTAFSGQCLV Trigger: TACAAGACACTGTCCTGAGAACGCTGTCATCACCCGTAGTTGCAAGTTTCGGAGCGGCAGTGGGAAGCATGCGGGACTACGACGAGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS TCA 72 bp | GAAGCACACCTCCTCCCCAGAACAGTACTGCAGCTATaGTATAACGCCTGGGCAGGGTTCGCAATAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: EAHLLPRTVLQL*YNAWAGFAIAA Trigger: GGCTGCTATTGCGAACCCTGCCCAGGCGTTATATCATAGCTGCAGTACTGTTCTGGGGAGGAGGTGTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS CAA 72 bp | GGGCGGAGATGTGACCAATGGCAATGGCTCTGCCTTTaGTTGGGGATCTGCCCATGCTATAGAGAAGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: GRRCDQWQWLCL*LGICPCYREVA Trigger: GGCCACTTCTCTATAGCATGGGCAGATCCCCAACAAAAGGCAGAGCCATTGCCATTGGTCACATCTCCGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491257.1 |
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| CDS GCA 72 bp | AATGAAGAGAAGCACACCTCCTCCCCAGAACAGTACTaGAGCTATGATATAACGCCTGGGCAGGGTTCGCAA | + |
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Preference number: 6 (lower is better) Translates to: NEEKHTSSPEQY*SYDITPGQGSQ Trigger: TTGCGAACCCTGCCCAGGCGTTATATCATAGCTGCAGTACTGTTCTGGGGAGGAGGTGTGCTTCTCTTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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| CDS CAA 90 bp | AAATATCACTGCTGGTACAGCTATGTTGTTCATTTTTGCAGCTTTTaGGATGATATCTTCAGCCTCTCTAAATCTTCTCTGGGATATCAG | + |
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Preference number: 6 (lower is better) Translates to: KYHCWYSYVVHFCSF*DDIFSLSKSSLGYQ Trigger: CTGATATCCCAGAGAAGATTTAGAGAGGCTGAAGATATCATCCAAAAAGCTGCAAAAATGAACAACATAGCTGTACCAGCAGTGATATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000200652.4 |
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