Pregenerated sensors for SLC22A3 (Homo sapiens)
Ensembl gene IDs: ENSG00000146477Ensembl transcript IDs: ENST00000275300.3
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTCCTCCGGGCTCCAGCCGCAGCGCTCGGCCAGCGCCGCGGCACTTaGCCCGCGGCACCAGTAGTGGTCGGGCTGCGTGCCCAGGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: LLRAPAAALGQRRGT*PAAPVVVGLRAQED Trigger: GTCTTCCTGGGCACGCAGCCCGACCACTACTGGTGCCGCGGGCCAAGTGCCGCGGCGCTGGCCGAGCGCTGCGGCTGGAGCCCGGAGGAG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS GCA 90 bp | AGCAAAAACACGCGCCTCTGGAAGCGCCCGAACTCGCCCACCCGCTaGAGCGCCTCGTCGAAGGAGGGCATGGTGCGCCCGCCGCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: SKNTRLWKRPNSPTR*SASSKEGMVRPPPA Trigger: GGCGGGCGGCGGGCGCACCATGCCCTCCTTCGACGAGGCGCTGCAGCGGGTGGGCGAGTTCGGGCGCTTCCAGAGGCGCGTGTTTTTGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS CCA 90 bp | CTATATTGCTTGCCGCAAAGGGGAGGCGTCGTCCAAGGCGCTCAATaGTTAGTAAGATCAAGAGAGCTCCTGGCAGTTCCACCACGCCCG | + |
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Preference number: 5 (lower is better) Translates to: LYCLPQRGGVVQGAQ*LVRSRELLAVPPRP Trigger: CGGGCGTGGTGGAACTGCCAGGAGCTCTCTTGATCTTACTAACCATTGAGCGCCTTGGACGACGCCTCCCCTTTGCGGCAAGCAATATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS CCA 72 bp | GCTCCAGCCGCAGCGCTCGGCCAGCGCCGCGGCACTTaGCCCGCGGCACCAGTAGTGGTCGGGCTGCGTGCC | + |
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Preference number: 6 (lower is better) Translates to: APAAALGQRRGT*PAAPVVVGLRA Trigger: GGCACGCAGCCCGACCACTACTGGTGCCGCGGGCCAAGTGCCGCGGCGCTGGCCGAGCGCTGCGGCTGGAGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS CAA 72 bp | GGCTCCAGCCGCAGCGCTCGGCCAGCGCCGCGGCACTaGGCCCGCGGCACCAGTAGTGGTCGGGCTGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: GSSRSARPAPRH*ARGTSSGRAAC Trigger: GCACGCAGCCCGACCACTACTGGTGCCGCGGGCCAAGTGCCGCGGCGCTGGCCGAGCGCTGCGGCTGGAGCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS CAA 72 bp | CAGCCGCCGCGGCACGGCACAAGGGGAGCCGAGCGGTaGGGGAAGGCGGCGAGTGGGTCCGCGCAGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: QPPRHGTRGAER*GKAASGSAQLR Trigger: TCTCAGCTGCGCGGACCCACTCGCCGCCTTCCCCAACCGCTCGGCTCCCCTTGTGCCGTGCCGCGGCGGCTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS GCA 72 bp | ACGCGCCTCTGGAAGCGCCCGAACTCGCCCACCCGCTaGAGCGCCTCGTCGAAGGAGGGCATGGTGCGCCCG | + |
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Preference number: 6 (lower is better) Translates to: TRLWKRPNSPTR*SASSKEGMVRP Trigger: CGGGCGCACCATGCCCTCCTTCGACGAGGCGCTGCAGCGGGTGGGCGAGTTCGGGCGCTTCCAGAGGCGCGT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS CCA 72 bp | ACGCCCGTCAGGCACAGCAGCAAAAACACGCGCCTCTaGAAGCGCCCGAACTCGCCCACCCGCTGCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: TPVRHSSKNTRL*KRPNSPTRCSA Trigger: GGCGCTGCAGCGGGTGGGCGAGTTCGGGCGCTTCCAGAGGCGCGTGTTTTTGCTGCTGTGCCTGACGGGCGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS GCA 72 bp | CACTTGGCCCGCGGCACCAGTAGTGGTCGGGCTGCGTaGCCAGGAAGACCACGCCGACGAAGAGGAAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: HLARGTSSGRAA*PGRPRRRRGRR Trigger: TCGCCTTCCTCTTCGTCGGCGTGGTCTTCCTGGGCACGCAGCCCGACCACTACTGGTGCCGCGGGCCAAGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS CAA 90 bp | TCTGGTAAGAACGCAGTGACAAGGCATGCCACCCCTGCCACTATATaGCTTGCCGCAAAGGGGAGGCGTCGTCCAAGGCGCTCAATGGTT | + |
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Preference number: 6 (lower is better) Translates to: SGKNAVTRHATPATI*LAAKGRRRPRRSMV Trigger: AACCATTGAGCGCCTTGGACGACGCCTCCCCTTTGCGGCAAGCAATATAGTGGCAGGGGTGGCATGCCTTGTCACTGCGTTCTTACCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS GCA 72 bp | CAGGAAGCGGAAGATCACAAACACAGGGAAGTTTGGTaGAAAGGCCACCACAACCCCAGTGACGCCAACACC | + |
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Preference number: 6 (lower is better) Translates to: QEAEDHKHREVW*KGHHNPSDANT Trigger: GGTGTTGGCGTCACTGGGGTTGTGGTGGCCTTTGCACCAAACTTCCCTGTGTTTGTGATCTTCCGCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS CCA 72 bp | TTGCCGCAAAGGGGAGGCGTCGTCCAAGGCGCTCAATaGTTAGTAAGATCAAGAGAGCTCCTGGCAGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LPQRGGVVQGAQ*LVRSRELLAVP Trigger: TGGAACTGCCAGGAGCTCTCTTGATCTTACTAACCATTGAGCGCCTTGGACGACGCCTCCCCTTTGCGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS CCA 72 bp | TTGCAGGAAGCGGAAGATCACAAACACAGGGAAGTTTaGTGCAAAGGCCACCACAACCCCAGTGACGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: LQEAEDHKHREV*CKGHHNPSDAN Trigger: GTTGGCGTCACTGGGGTTGTGGTGGCCTTTGCACCAAACTTCCCTGTGTTTGTGATCTTCCGCTTCCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS CAA 72 bp | TTCAGGATGGCTTGGGTGAGGTCCAGCATCCACGCATaGACACAGACAAGGTCAAACTCGCTGACGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: FRMAWVRSSIHA*TQTRSNSLTMV Trigger: CACCATCGTCAGCGAGTTTGACCTTGTCTGTGTCAATGCGTGGATGCTGGACCTCACCCAAGCCATCCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS TCA 72 bp | TCCTCAACCATGCTATTCCTTCTGGTAAGAACGCAGTaGCAAGGCATGCCACCCCTGCCACTATATTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SSTMLFLLVRTQ*QGMPPLPLYCL Trigger: CAAGCAATATAGTGGCAGGGGTGGCATGCCTTGTCACTGCGTTCTTACCAGAAGGAATAGCATGGTTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS TCA 72 bp | TTGCCCCCTATAATTCCCAGGCGCATGACAAGTCCTTaGTACACCACTGCGCTTGTGAACCAAGCAAACATA | + |
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Preference number: 6 (lower is better) Translates to: LPPIIPRRMTSP*YTTALVNQANI Trigger: TATGTTTGCTTGGTTCACAAGCGCAGTGGTGTATCAAGGACTTGTCATGCGCCTGGGAATTATAGGGGGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS CAA 72 bp | GTAGCAAGTCATCCACGTCCCCTTTCCAAATACACCTaGCAGGAAGCGGAAGATCACAAACACAGGGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: VASHPRPLSKYT*QEAEDHKHREV Trigger: AACTTCCCTGTGTTTGTGATCTTCCGCTTCCTGCAAGGTGTATTTGGAAAGGGGACGTGGATGACTTGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS CAA 90 bp | CACAATCACGTAGCAAGTCATCCACGTCCCCTTTCCAAATACACCTaGCAGGAAGCGGAAGATCACAAACACAGGGAAGTTTGGTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: HNHVASHPRPLSKYT*QEAEDHKHREVWCK Trigger: TTTGCACCAAACTTCCCTGTGTTTGTGATCTTCCGCTTCCTGCAAGGTGTATTTGGAAAGGGGACGTGGATGACTTGCTACGTGATTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS CAA 90 bp | TATATAGAGGTTGCCCCCTATAATTCCCAGGCGCATGACAAGTCCTaGATACACCACTGCGCTTGTGAACCAAGCAAACATAAGAATAAG | + |
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Preference number: 6 (lower is better) Translates to: YIEVAPYNSQAHDKS*IHHCACEPSKHKNK Trigger: CTTATTCTTATGTTTGCTTGGTTCACAAGCGCAGTGGTGTATCAAGGACTTGTCATGCGCCTGGGAATTATAGGGGGCAACCTCTATATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS CAA 90 bp | TCCAAGGGTAAAGAACATTTGAATCACGATTCCCACAATCCTCCTTaGTTTCGAACCTACTATTTCTGTCACAATCACGTAGCAAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SKGKEHLNHDSHNPP*FRTYYFCHNHVASH Trigger: ATGACTTGCTACGTGATTGTGACAGAAATAGTAGGTTCGAAACAAAGGAGGATTGTGGGAATCGTGATTCAAATGTTCTTTACCCTTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS CAA 90 bp | GTAGGCAATTCCAGGGAGAATTATGATTCCAAGGGTAAAGAACATTaGAATCACGATTCCCACAATCCTCCTTTGTTTCGAACCTACTAT | + |
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Preference number: 6 (lower is better) Translates to: VGNSRENYDSKGKEH*NHDSHNPPLFRTYY Trigger: ATAGTAGGTTCGAAACAAAGGAGGATTGTGGGAATCGTGATTCAAATGTTCTTTACCCTTGGAATCATAATTCTCCCTGGAATTGCCTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS TCA 72 bp | CCAGGGAGAATTATGATTCCAAGGGTAAAGAACATTTaGATCACGATTCCCACAATCCTCCTTTGTTTCGAA | + |
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Preference number: 6 (lower is better) Translates to: PGRIMIPRVKNI*ITIPTILLCFE Trigger: TTCGAAACAAAGGAGGATTGTGGGAATCGTGATTCAAATGTTCTTTACCCTTGGAATCATAATTCTCCCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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| CDS CAA 72 bp | AAAGAACATTTGAATCACGATTCCCACAATCCTCCTTaGTTTCGAACCTACTATTTCTGTCACAATCACGTA | + |
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Preference number: 6 (lower is better) Translates to: KEHLNHDSHNPP*FRTYYFCHNHV Trigger: TACGTGATTGTGACAGAAATAGTAGGTTCGAAACAAAGGAGGATTGTGGGAATCGTGATTCAAATGTTCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275300.3 |
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