RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC22A23 (Homo sapiens)

Ensembl gene IDs: ENSG00000137266

Ensembl transcript IDs: ENST00000380298.2, ENST00000380302.8, ENST00000406686.8, ENST00000433689.2, ENST00000436008.6, ENST00000467144.5, ENST00000467177.5, ENST00000482874.1, ENST00000485307.5, ENST00000490273.5, ENST00000496753.1, ENST00000497691.5

Found 1277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACCCTGGAGCCCCGGGTTCCGCAGGCCGGGCTACATGGCCTTCATaGCGTTGGCCGTGGCACCCTCGGGCAGTGTGTCACCCGCGGCTG +
Preference number: 1 (lower is better)
Translates to: DPGAPGSAGRATWPS*RWPWHPRAVCHPRL
Trigger: CAGCCGCGGGTGACACACTGCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACCCGGGGCTCCAGGGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 90 bp GGAGCCCCGGGTTCCGCAGGCCGGGCTACATGGCCTTCATGCCGTTaGCCGTGGCACCCTCGGGCAGTGTGTCACCCGCGGCTGCGGCAT +
Preference number: 1 (lower is better)
Translates to: GAPGSAGRATWPSCR*PWHPRAVCHPRLRH
Trigger: ATGCCGCAGCCGCGGGTGACACACTGCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACCCGGGGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 90 bp CCGGGTTCCGCAGGCCGGGCTACATGGCCTTCATGCCGTTGGCCGTaGCACCCTCGGGCAGTGTGTCACCCGCGGCTGCGGCATCGTGGA +
Preference number: 1 (lower is better)
Translates to: PGSAGRATWPSCRWP*HPRAVCHPRLRHRG
Trigger: TCCACGATGCCGCAGCCGCGGGTGACACACTGCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 90 bp GCTGCCCCAGACCCTGGAGCCCCGGGTTCCGCAGGCCGGGCTACATaGCCTTCATGCCGTTGGCCGTGGCACCCTCGGGCAGTGTGTCAC +
Preference number: 1 (lower is better)
Translates to: AAPDPGAPGSAGRAT*PSCRWPWHPRAVCH
Trigger: GTGACACACTGCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACCCGGGGCTCCAGGGTCTGGGGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR GCA 90 bp CATGCCGTTGGCCGTGGCACCCTCGGGCAGTGTGTCACCCGCGGCTaGGGCATCGTGGAGGCCCGAGTAGTCCTTGAGCTCGGCGTTGGT +
Preference number: 1 (lower is better)
Translates to: HAVGRGTLGQCVTRG*GIVEARVVLELGVG
Trigger: ACCAACGCCGAGCTCAAGGACTACTCGGGCCTCCACGATGCCGCAGCCGCGGGTGACACACTGCCCGAGGGTGCCACGGCCAACGGCATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR GCA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTaGCCCAGACCCTGGAGCCCCGGGTTCCGCAGGCCGGGCTACATG +
Preference number: 1 (lower is better)
Translates to: PGCVFGPWSVNLCPS*PRPWSPGFRRPGYM
Trigger: CATGTAGCCCGGCCTGCGGAACCCGGGGCTCCAGGGTCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR GCA 90 bp GCTGAGCCCGGCGGGCCCAGATGCGTATCAGGCTTGGGTGGGTCCTaGCACCTTGCTCACTTGGTACCGGATTTCCCGGGGCTGTGCCCA +
Preference number: 1 (lower is better)
Translates to: AEPGGPRCVSGLGGS*HLAHLVPDFPGLCP
Trigger: TGGGCACAGCCCCGGGAAATCCGGTACCAAGTGAGCAAGGTGGCAGGACCCACCCAAGCCTGATACGCATCTGGGCCCGCCGGGCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp GCCAGGAGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTaGTCACTGTGGCATCTTCCCAGAGCAACTGCGTCTCGCTGCCCA +
Preference number: 1 (lower is better)
Translates to: ARSRVPSPQRDRPWP*SLWHLPRATASRCP
Trigger: TGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCTCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp GGTGCTGCCAGGAGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATaGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACTGCGTCTCGC +
Preference number: 1 (lower is better)
Translates to: GAARSRVPSPQRDRP*PWSLWHLPRATASR
Trigger: GCGAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCTCCTGGCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp GCAGCAGCCCTCCCCTGCGCCCGAGGAATCGGACCACCACGCACATaGCCAGGCAGGACACCAGCGCGATGCTGGCCGTGGTATAGTAGT +
Preference number: 1 (lower is better)
Translates to: AAALPCARGIGPPRT*PGRTPARCWPWYSS
Trigger: ACTACTATACCACGGCCAGCATCGCGCTGGTGTCCTGCCTGGCCATGTGCGTGGTGGTCCGATTCCTCGGGCGCAGGGGAGGGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 90 bp GTGGAGGCCCGAGTAGTCCTTGAGCTCGGCGTTGGTGAGCAGCAGTaGCTGCTCCCCCTTCTTGTGCGGCAGCAGCGGCTGGCGCGTGTA +
Preference number: 1 (lower is better)
Translates to: VEARVVLELGVGEQQ*LLPLLVRQQRLARV
Trigger: TACACGCGCCAGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCCACTGCTGCTCACCAACGCCGAGCTCAAGGACTACTCGGGCCTCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR GCA 90 bp CGGCGGGCCCAGATGCGTATCAGGCTTGGGTGGGTCCTGCCACCTTaGTCACTTGGTACCGGATTTCCCGGGGCTGTGCCCACAGGGAAG +
Preference number: 1 (lower is better)
Translates to: RRAQMRIRLGWVLPP*SLGTGFPGAVPTGK
Trigger: CTTCCCTGTGGGCACAGCCCCGGGAAATCCGGTACCAAGTGAGCAAGGTGGCAGGACCCACCCAAGCCTGATACGCATCTGGGCCCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp GGCCTGGTGCTGAGGGTGATGGGTGCAGACGTACACCTGTCCAGGTaGAGGCTCAGGGGCCTCGCTGGATCCTTCCCACCTTCCCCAACT +
Preference number: 1 (lower is better)
Translates to: GLVLRVMGADVHLSR*RLRGLAGSFPPSPT
Trigger: AGTTGGGGAAGGTGGGAAGGATCCAGCGAGGCCCCTGAGCCTGCACCTGGACAGGTGTACGTCTGCACCCATCACCCTCAGCACCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp GTGGTGCAGGAAGTAGCCTTTCTGGTTGTGCAGCTCGATGATGGGTaGCGTCAGCATGCCGAAGCCCGCGCTGGCCAGCACCAGCCCCAG +
Preference number: 1 (lower is better)
Translates to: VVQEVAFLVVQLDDG*RQHAEARAGQHQPQ
Trigger: CTGGGGCTGGTGCTGGCCAGCGCGGGCTTCGGCATGCTGACGGCACCCATCATCGAGCTGCACAACCAGAAAGGCTACTTCCTGCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 90 bp GGGTGCAGACGTACACCTGTCCAGGTGCAGGCTCAGGGGCCTCGCTaGATCCTTCCCACCTTCCCCAACTGCCTACTGGCCTGGCTACTG +
Preference number: 1 (lower is better)
Translates to: GCRRTPVQVQAQGPR*ILPTFPNCLLAWLL
Trigger: CAGTAGCCAGGCCAGTAGGCAGTTGGGGAAGGTGGGAAGGATCCAGCGAGGCCCCTGAGCCTGCACCTGGACAGGTGTACGTCTGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp GAGCAAGTGGAGGCAGGGAGAGGCTGGCCAGACAGCCTCCCTTCCTaGGTATCTCAAGATCCCAGGTGTCGGCGTGGTCCAGCCACTGGA +
Preference number: 1 (lower is better)
Translates to: EQVEAGRGWPDSLPS*VSQDPRCRRGPATG
Trigger: TCCAGTGGCTGGACCACGCCGACACCTGGGATCTTGAGATACCCAGGAAGGGAGGCTGTCTGGCCAGCCTCTCCCTGCCTCCACTTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR TCA 90 bp AGTGTGGACCTCCCCCGCACATGCGATACCTCGGGCCGGGCGGTGTaGCCTCACAGGCCCACTTATGGCACTTGCAGTTTGGGATTGCTC +
Preference number: 1 (lower is better)
Translates to: SVDLPRTCDTSGRAV*PHRPTYGTCSLGLL
Trigger: GAGCAATCCCAAACTGCAAGTGCCATAAGTGGGCCTGTGAGGTCACACCGCCCGGCCCGAGGTATCGCATGTGCGGGGGAGGTCCACACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp GAACCACAAGCTGCAACTAGTGGGAAGTGTGGGGATTGTGTGTCCTaGCCGGGGCCGGGCCTTCAGGAAGCATGTGCAGTCGCACCAGCC +
Preference number: 1 (lower is better)
Translates to: EPQAATSGKCGDCVS*PGPGLQEACAVAPA
Trigger: GGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCAGGACACACAATCCCCACACTTCCCACTAGTTGCAGCTTGTGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380298.2
3UTR CCA 90 bp ATGAAAGCGAGGTGGTGCCTTCTAGACGAGAGGACAGCTGTAGTGTaGACCTCCCCCGCACATGCGATACCTCGGGCCGGGCGGTGTGAC +
Preference number: 1 (lower is better)
Translates to: MKARWCLLDERTAVV*TSPAHAIPRAGRCD
Trigger: GTCACACCGCCCGGCCCGAGGTATCGCATGTGCGGGGGAGGTCCACACTACAGCTGTCCTCTCGTCTAGAAGGCACCACCTCGCTTTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp CACCAGTTGAGAGGCTCAGCTTGGCTGAGGCAGCTTTCCCACCCCTaGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTG +
Preference number: 1 (lower is better)
Translates to: HQLRGSAWLRQLSHP*LRVRSLVCKPVPKL
Trigger: CAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTGGGAAAGCTGCCTCAGCCAAGCTGAGCCTCTCAACTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR CCA 90 bp CCAGATGCGTATCAGGCTTGGGTGGGTCCTGCCACCTTGCTCACTTaGTACCGGATTTCCCGGGGCTGTGCCCACAGGGAAGTGTTGCTG +
Preference number: 1 (lower is better)
Translates to: PDAYQAWVGPATLLT*YRISRGCAHREVLL
Trigger: CAGCAACACTTCCCTGTGGGCACAGCCCCGGGAAATCCGGTACCAAGTGAGCAAGGTGGCAGGACCCACCCAAGCCTGATACGCATCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp AGCGGCACCTTCACCTCGTGGCCCATCATGCTCCTGGCAAAGCAGTaGTGGATCCCGTACCCCGTCAGCGAGTTCACACACAGGACCACA +
Preference number: 1 (lower is better)
Translates to: SGTFTSWPIMLLAKQ*WIPYPVSEFTHRTT
Trigger: TGTGGTCCTGTGTGTGAACTCGCTGACGGGGTACGGGATCCACCACTGCTTTGCCAGGAGCATGATGGGCCACGAGGTGAAGGTGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 90 bp AGTTCTCCAGGAGCGGCACCTTCACCTCGTGGCCCATCATGCTCCTaGCAAAGCAGTGGTGGATCCCGTACCCCGTCAGCGAGTTCACAC +
Preference number: 1 (lower is better)
Translates to: SSPGAAPSPRGPSCS*QSSGGSRTPSASSH
Trigger: GTGTGAACTCGCTGACGGGGTACGGGATCCACCACTGCTTTGCCAGGAGCATGATGGGCCACGAGGTGAAGGTGCCGCTCCTGGAGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR TCA 90 bp ATCTCCAGGCCCTTACTGATGTGTGGACCGCATGTGGAGGAGACATaGGTGGCGACAGCAAGCAGCAGGCCGGGTGGAAAGCCAGAAGGG +
Preference number: 1 (lower is better)
Translates to: ISRPLLMCGPHVEET*VATASSRPGGKPEG
Trigger: CCCTTCTGGCTTTCCACCCGGCCTGCTGCTTGCTGTCGCCACTCATGTCTCCTCCACATGCGGTCCACACATCAGTAAGGGCCTGGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp GGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACTaGGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAG +
Preference number: 1 (lower is better)
Translates to: GPAMALVTVASSQSN*VSLPREVIPFVISE
Trigger: CTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp CATAGAAGTTCTCCAGGAGCGGCACCTTCACCTCGTGGCCCATCATaGTCCTGGCAAAGCAGTGGTGGATCCCGTACCCCGTCAGCGAGT +
Preference number: 1 (lower is better)
Translates to: HRSSPGAAPSPRGPS*SWQSSGGSRTPSAS
Trigger: ACTCGCTGACGGGGTACGGGATCCACCACTGCTTTGCCAGGAGCATGATGGGCCACGAGGTGAAGGTGCCGCTCCTGGAGAACTTCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR GCA 90 bp GGAATCGGACCACCACGCACATGGCCAGGCAGGACACCAGCGCGATaGTGGCCGTGGTATAGTAGTCAGCATAGAAGTTCTCCAGGAGCG +
Preference number: 1 (lower is better)
Translates to: GIGPPRTWPGRTPAR*WPWYSSQHRSSPGA
Trigger: CGCTCCTGGAGAACTTCTATGCTGACTACTATACCACGGCCAGCATCGCGCTGGTGTCCTGCCTGGCCATGTGCGTGGTGGTCCGATTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 90 bp AGACAGCCTCCCTTCCTGGGTATCTCAAGATCCCAGGTGTCGGCGTaGTCCAGCCACTGGAAACACGTGGCCAAGAGTCTGCTTGCCCCT +
Preference number: 1 (lower is better)
Translates to: RQPPFLGISRSQVSA*SSHWKHVAKSLLAP
Trigger: AGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGCTGGACCACGCCGACACCTGGGATCTTGAGATACCCAGGAAGGGAGGCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp CCACCACGCACATGGCCAGGCAGGACACCAGCGCGATGCTGGCCGTaGTATAGTAGTCAGCATAGAAGTTCTCCAGGAGCGGCACCTTCA +
Preference number: 1 (lower is better)
Translates to: PPRTWPGRTPARCWP*YSSQHRSSPGAAPS
Trigger: TGAAGGTGCCGCTCCTGGAGAACTTCTATGCTGACTACTATACCACGGCCAGCATCGCGCTGGTGTCCTGCCTGGCCATGTGCGTGGTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 90 bp ATCGGACCACCACGCACATGGCCAGGCAGGACACCAGCGCGATGCTaGCCGTGGTATAGTAGTCAGCATAGAAGTTCTCCAGGAGCGGCA +
Preference number: 1 (lower is better)
Translates to: IGPPRTWPGRTPARC*PWYSSQHRSSPGAA
Trigger: TGCCGCTCCTGGAGAACTTCTATGCTGACTACTATACCACGGCCAGCATCGCGCTGGTGTCCTGCCTGGCCATGTGCGTGGTGGTCCGAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR GCA 90 bp GCCAGGCTGTCCAGAAAAGCTGGTGCCCAAGTTGCTACAAAGTGGTaGCTGCCCTTGCCAAGGAGGCTGTCTCTTAGTCGCCTTGGGTGT +
Preference number: 1 (lower is better)
Translates to: ARLSRKAGAQVATKW*LPLPRRLSLSRLGC
Trigger: ACACCCAAGGCGACTAAGAGACAGCCTCCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp GAAGCCAGGCTGTCCAGAAAAGCTGGTGCCCAAGTTGCTACAAAGTaGTGCCTGCCCTTGCCAAGGAGGCTGTCTCTTAGTCGCCTTGGG +
Preference number: 1 (lower is better)
Translates to: EARLSRKAGAQVATK*CLPLPRRLSLSRLG
Trigger: CCCAAGGCGACTAAGAGACAGCCTCCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp GCCGGGCGGTGTGACCTCACAGGCCCACTTATGGCACTTGCAGTTTaGGATTGCTCATTTGGCTCTAGGAAGCGGTGGTGTCTGAGTGTG +
Preference number: 1 (lower is better)
Translates to: AGRCDLTGPLMALAV*DCSFGSRKRWCLSV
Trigger: CACACTCAGACACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATAAGTGGGCCTGTGAGGTCACACCGCCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp ATGCGATACCTCGGGCCGGGCGGTGTGACCTCACAGGCCCACTTATaGCACTTGCAGTTTGGGATTGCTCATTTGGCTCTAGGAAGCGGT +
Preference number: 1 (lower is better)
Translates to: MRYLGPGGVTSQAHL*HLQFGIAHLALGSG
Trigger: ACCGCTTCCTAGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATAAGTGGGCCTGTGAGGTCACACCGCCCGGCCCGAGGTATCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp GGCTGTCCAGAAAAGCTGGTGCCCAAGTTGCTACAAAGTGGTGCCTaGCCTTGCCAAGGAGGCTGTCTCTTAGTCGCCTTGGGTGTCCTA +
Preference number: 1 (lower is better)
Translates to: GCPEKLVPKLLQSGA*PCQGGCLLVALGVL
Trigger: TAGGACACCCAAGGCGACTAAGAGACAGCCTCCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp GTGCAGGCTCAGGGGCCTCGCTGGATCCTTCCCACCTTCCCCAACTaGCTACTGGCCTGGCTACTGGATAGGTCCTATTCTGTACATAAT +
Preference number: 1 (lower is better)
Translates to: VQAQGPRWILPTFPN*LLAWLLDRSYSVHN
Trigger: ATTATGTACAGAATAGGACCTATCCAGTAGCCAGGCCAGTAGGCAGTTGGGGAAGGTGGGAAGGATCCAGCGAGGCCCCTGAGCCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp TTACCTGCCGACCGTCGGCAAGTCAGCCTCACACCCACTGGACTCTaGTCCCAAGAGCCCAGGCTGTTTTCCTCAAAGCTAGCCTCTTTT +
Preference number: 1 (lower is better)
Translates to: LPADRRQVSLTPTGL*SQEPRLFSSKLASF
Trigger: AAAAGAGGCTAGCTTTGAGGAAAACAGCCTGGGCTCTTGGGAGCAGAGTCCAGTGGGTGTGAGGCTGACTTGCCGACGGTCGGCAGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp GGGTCCTGCCACCTTGCTCACTTGGTACCGGATTTCCCGGGGCTGTaGCCACAGGGAAGTGTTGCTGCTCTGGCAACATTTCATAAAGGT +
Preference number: 1 (lower is better)
Translates to: GSCHLAHLVPDFPGL*PQGSVAALATFHKG
Trigger: ACCTTTATGAAATGTTGCCAGAGCAGCAACACTTCCCTGTGGGCACAGCCCCGGGAAATCCGGTACCAAGTGAGCAAGGTGGCAGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp GCCCCTTGCTGTGTCTTTACACATCTCCAGGCCCTTACTGATGTGTaGACCGCATGTGGAGGAGACATGAGTGGCGACAGCAAGCAGCAG +
Preference number: 1 (lower is better)
Translates to: APCCVFTHLQALTDV*TACGGDMSGDSKQQ
Trigger: CTGCTGCTTGCTGTCGCCACTCATGTCTCCTCCACATGCGGTCCACACATCAGTAAGGGCCTGGAGATGTGTAAAGACACAGCAAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp TTCCTGGGTATCTCAAGATCCCAGGTGTCGGCGTGGTCCAGCCACTaGAAACACGTGGCCAAGAGTCTGCTTGCCCCTTGCTGTGTCTTT +
Preference number: 1 (lower is better)
Translates to: FLGISRSQVSAWSSH*KHVAKSLLAPCCVF
Trigger: AAAGACACAGCAAGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGCTGGACCACGCCGACACCTGGGATCTTGAGATACCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp TGGTCCAGCCACTGGAAACACGTGGCCAAGAGTCTGCTTGCCCCTTaGTGTGTCTTTACACATCTCCAGGCCCTTACTGATGTGTGGACC +
Preference number: 1 (lower is better)
Translates to: WSSHWKHVAKSLLAP*CVFTHLQALTDVWT
Trigger: GGTCCACACATCAGTAAGGGCCTGGAGATGTGTAAAGACACAGCAAGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGCTGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp GGGCCTCGCTGGATCCTTCCCACCTTCCCCAACTGCCTACTGGCCTaGCTACTGGATAGGTCCTATTCTGTACATAATGGGGGTTTGTTG +
Preference number: 1 (lower is better)
Translates to: GPRWILPTFPNCLLA*LLDRSYSVHNGGLL
Trigger: CAACAAACCCCCATTATGTACAGAATAGGACCTATCCAGTAGCCAGGCCAGTAGGCAGTTGGGGAAGGTGGGAAGGATCCAGCGAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp TTCTGTGTGAAGTGGAGGATCAGCCTCTTTGCAGACTCAAACTGCTaGGTGGCCATTAGCCACCGGAGGGACTCGGGGAATATCCTGCTG +
Preference number: 1 (lower is better)
Translates to: FCVKWRISLFADSNC*VAISHRRDSGNILL
Trigger: CAGCAGGATATTCCCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTCCACTTCACACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR TCA 90 bp TCTGCTTGCCCCTTGCTGTGTCTTTACACATCTCCAGGCCCTTACTaGTGTGTGGACCGCATGTGGAGGAGACATGAGTGGCGACAGCAA +
Preference number: 1 (lower is better)
Translates to: SACPLLCLYTSPGPY*CVDRMWRRHEWRQQ
Trigger: TTGCTGTCGCCACTCATGTCTCCTCCACATGCGGTCCACACATCAGTAAGGGCCTGGAGATGTGTAAAGACACAGCAAGGGGCAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR TCA 90 bp ACATTTCATAAAGGTGTTGCTCAACAGCTTCAGGTATCCCTAGGCTaGAGCTGCCACCAAACAGGCACCCGGCCTCCTCCTCCTCAGGCT +
Preference number: 1 (lower is better)
Translates to: TFHKGVAQQLQVSLG*SCHQTGTRPPPPQA
Trigger: AGCCTGAGGAGGAGGAGGCCGGGTGCCTGTTTGGTGGCAGCTTCAGCCTAGGGATACCTGAAGCTGTTGAGCAACACCTTTATGAAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp CCAGAAAAGCTGGTGCCCAAGTTGCTACAAAGTGGTGCCTGCCCTTaGCAAGGAGGCTGTCTCTTAGTCGCCTTGGGTGTCCTACAAGTT +
Preference number: 1 (lower is better)
Translates to: PEKLVPKLLQSGACP*QGGCLLVALGVLQV
Trigger: AACTTGTAGGACACCCAAGGCGACTAAGAGACAGCCTCCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp AGTTGGACAATGCCAGTAAGAAGCCAGGCTGTCCAGAAAAGCTGGTaGCCAAGTTGCTACAAAGTGGTGCCTGCCCTTGCCAAGGAGGCT +
Preference number: 1 (lower is better)
Translates to: SWTMPVRSQAVQKSW*PSCYKVVPALAKEA
Trigger: AGCCTCCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGCTTCTTACTGGCATTGTCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp TTCTTCTGTGTGAAGTGGAGGATCAGCCTCTTTGCAGACTCAAACTaGTGGGTGGCCATTAGCCACCGGAGGGACTCGGGGAATATCCTG +
Preference number: 1 (lower is better)
Translates to: FFCVKWRISLFADSN*WVAISHRRDSGNIL
Trigger: CAGGATATTCCCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTCCACTTCACACAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 90 bp GTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTaGAGCCAATCTGGGAGAGGAGGAATAAAAACGAGCACATCTCAG +
Preference number: 1 (lower is better)
Translates to: VVPAQELPVHEGLFC*SQSGRGGIKTSTSQ
Trigger: CTGAGATGTGCTCGTTTTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR CCA 90 bp TTAGCATATCCTTCCACAACACAGTACAGTAAGTGGACTGCAGGGTaGCCTGGTGCTGAGGGTGATGGGTGCAGACGTACACCTGTCCAG +
Preference number: 1 (lower is better)
Translates to: LAYPSTTQYSKWTAG*PGAEGDGCRRTPVQ
Trigger: CTGGACAGGTGTACGTCTGCACCCATCACCCTCAGCACCAGGCCACCCTGCAGTCCACTTACTGTACTGTGTTGTGGAAGGATATGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp CACACCATACTGCTTTTCCAAAACACACGGGACATGAAAGCGAGGTaGTGCCTTCTAGACGAGAGGACAGCTGTAGTGTGGACCTCCCCC +
Preference number: 1 (lower is better)
Translates to: HTILLFQNTRDMKAR*CLLDERTAVVWTSP
Trigger: GGGGGAGGTCCACACTACAGCTGTCCTCTCGTCTAGAAGGCACCACCTCGCTTTCATGTCCCGTGTGTTTTGGAAAAGCAGTATGGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTaGTGGAGCCAATCTGGGAGAGGAGGAATAAAAACGAGCACATCT +
Preference number: 1 (lower is better)
Translates to: QVVPAQELPVHEGLF*WSQSGRGGIKTSTS
Trigger: AGATGTGCTCGTTTTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR CCA 90 bp ATGAGTTGGACAATGCCAGTAAGAAGCCAGGCTGTCCAGAAAAGCTaGTGCCCAAGTTGCTACAAAGTGGTGCCTGCCCTTGCCAAGGAG +
Preference number: 1 (lower is better)
Translates to: MSWTMPVRSQAVQKS*CPSCYKVVPALAKE
Trigger: CTCCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGCTTCTTACTGGCATTGTCCAACTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp GAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTaGAAGGACACAGCCCATGGCAAAGACATGCTTCGAGAAGGGATG +
Preference number: 1 (lower is better)
Translates to: EVTSLSHPGPRPQFP*KDTAHGKDMLREGM
Trigger: CATCCCTTCTCGAAGCATGTCTTTGCCATGGGCTGTGTCCTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp CCCTTGATGTCGCCCTCAGGGTTCATGCGATTCTTCTGTGTGAAGTaGAGGATCAGCCTCTTTGCAGACTCAAACTGCTGGGTGGCCATT +
Preference number: 1 (lower is better)
Translates to: PLMSPSGFMRFFCVK*RISLFADSNCWVAI
Trigger: AATGGCCACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTCCACTTCACACAGAAGAATCGCATGAACCCTGAGGGCGACATCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR GCA 90 bp CGGTGTGACCTCACAGGCCCACTTATGGCACTTGCAGTTTGGGATTaGTCATTTGGCTCTAGGAAGCGGTGGTGTCTGAGTGTGATACTT +
Preference number: 1 (lower is better)
Translates to: RCDLTGPLMALAVWD*SFGSRKRWCLSVIL
Trigger: AAGTATCACACTCAGACACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATAAGTGGGCCTGTGAGGTCACACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp AGACACGCAGCTGTGAACGACAGTTCAGAACTCAGCGTAAGCTTGTaGTATGAACGAGCACCGTCAGAGAATTCCCACCCACACGTACAG +
Preference number: 1 (lower is better)
Translates to: RHAAVNDSSELSVSL*YERAPSENSHPHVQ
Trigger: CTGTACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTCGTTCACAGCTGCGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTaGAAAGACAGGATTTCCCCACACCAGTTGAGAGGCTCAGCTTGG +
Preference number: 1 (lower is better)
Translates to: ISKEFVSSDPRSLDF*KDRISPHQLRGSAW
Trigger: CCAAGCTGAGCCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR CCA 90 bp CCTACAAGTTTCCTCCGAAAATGCCAAGAGGAAACCTCCACTTTCTaGGGTGAAACGAGGAACACGAAGAGACCCATGGAGGTCGAGGCA +
Preference number: 1 (lower is better)
Translates to: PTSFLRKCQEETSTF*GETRNTKRPMEVEA
Trigger: TGCCTCGACCTCCATGGGTCTCTTCGTGTTCCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACTTGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR TCA 90 bp CGCAGCTGTGAACGACAGTTCAGAACTCAGCGTAAGCTTGTGCTATaGACGAGCACCGTCAGAGAATTCCCACCCACACGTACAGAAACA +
Preference number: 1 (lower is better)
Translates to: RSCERQFRTQRKLVL*TSTVREFPPTRTET
Trigger: TGTTTCTGTACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTCGTTCACAGCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp ACTCTAGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATaGAGTCCCGGAAACGCTCCACGGTCCTCTCCTGCCTCTGCACGC +
Preference number: 1 (lower is better)
Translates to: TLAKAKFMYISLRLK*SPGNAPRSSPASAR
Trigger: GCGTGCAGAGGCAGGAGAGGACCGTGGAGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCTAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp CTGTCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATaGCAAGAGGAAACCTCCACTTTCTGGGGTGAAACGAGGAACACG +
Preference number: 1 (lower is better)
Translates to: LSLSRLGCPTSFLRK*QEETSTFWGETRNT
Trigger: CGTGTTCCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp GTGGAGATCAGAGATCATGACCAGAAGAGTGTGAGTGCTGTCCCTTaGCACCAACTTCCTAGAGATTTCGGGCAGCACTCTACAGCTTCA +
Preference number: 1 (lower is better)
Translates to: VEIRDHDQKSVSAVP*HQLPRDFGQHSTAS
Trigger: TGAAGCTGTAGAGTGCTGCCCGAAATCTCTAGGAAGTTGGTGGCAAGGGACAGCACTCACACTCTTCTGGTCATGATCTCTGATCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR TCA 90 bp TATTGTCATTTGAGGTGGAGATCAGAGATCATGACCAGAAGAGTGTaGGTGCTGTCCCTTGCCACCAACTTCCTAGAGATTTCGGGCAGC +
Preference number: 1 (lower is better)
Translates to: YCHLRWRSEIMTRRV*VLSLATNFLEISGS
Trigger: GCTGCCCGAAATCTCTAGGAAGTTGGTGGCAAGGGACAGCACTCACACTCTTCTGGTCATGATCTCTGATCTCCACCTCAAATGACAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp GATCCTGAAGGAAAGATGAAGCTGGTTTTAACGGCGTCTGTGAGCTaGTTTCCCTGCACACGAACAGAAGCTCTTACATTTAACGGCAGA +
Preference number: 1 (lower is better)
Translates to: DPEGKMKLVLTASVS*FPCTRTEALTFNGR
Trigger: TCTGCCGTTAAATGTAAGAGCTTCTGTTCGTGTGCAGGGAAAGCAGCTCACAGACGCCGTTAAAACCAGCTTCATCTTTCCTTCAGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR TCA 90 bp GCAGCGTTGAGCTTTGGTGAGTTATTGCTTTCTTTCAATTTGTCTTaGTGCCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGG +
Preference number: 1 (lower is better)
Translates to: AALSFGELLLSFNLS*CLREAGGHLDSPMR
Trigger: CCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGGCATCAAGACAAATTGAAAGAAAGCAATAACTCACCAAAGCTCAACGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR TCA 90 bp AAATTCCTCTTAATTTTACTGATGGCCCCCGTCTCTCAGGTGGTCTaGGAGTGGCACTTGGTAAACAGTGTGTGTTTAATCCAGCCTCTG +
Preference number: 1 (lower is better)
Translates to: KFLLILLMAPVSQVV*EWHLVNSVCLIQPL
Trigger: CAGAGGCTGGATTAAACACACACTGTTTACCAAGTGCCACTCTCAGACCACCTGAGAGACGGGGGCCATCAGTAAAATTAAGAGGAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 90 bp GATCCTGAAGGAAAGATGAAGCTGGTTTTAACGGCGTCTGTGAGCTaGTTTCCCTGCACACGAACAGAAGCTCTTACCTTACAAACAGAA +
Preference number: 1 (lower is better)
Translates to: DPEGKMKLVLTASVS*FPCTRTEALTLQTE
Trigger: TTCTGTTTGTAAGGTAAGAGCTTCTGTTCGTGTGCAGGGAAAGCAGCTCACAGACGCCGTTAAAACCAGCTTCATCTTTCCTTCAGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR TCA 90 bp GGTGAGCCAGACTGGCCAGTGCATTTGCAGATTTTTGGAGCTGGGTaGTGGGCTCATTCCACTCTTCTATTTTTGTGTATATTTGAACAG +
Preference number: 1 (lower is better)
Translates to: GEPDWPVHLQIFGAG*WAHSTLLFLCIFEQ
Trigger: CTGTTCAAATATACACAAAAATAGAAGAGTGGAATGAGCCCATCACCCAGCTCCAAAAATCTGCAAATGCACTGGCCAGTCTGGCTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380298.2
3UTR TCA 90 bp CGAGTGAAGACACAGCTTACAGAGGCGTTCAAAGTAGTGACGCAGTaGGGTCTGAATGAACACGGAGGATTTTATTACTCACCATTAATG +
Preference number: 1 (lower is better)
Translates to: RVKTQLTEAFKVVTQ*GLNEHGGFYYSPLM
Trigger: CATTAATGGTGAGTAATAAAATCCTCCGTGTTCATTCAGACCTCACTGCGTCACTACTTTGAACGCCTCTGTAAGCTGTGTCTTCACTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 90 bp ATCTCAGGTCTCGACGCATCTGTTAGCTGTGTACTCACAAAGCTGTaGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTT +
Preference number: 1 (lower is better)
Translates to: ISGLDASVSCVLTKL*RYDCCSIKISGEMF
Trigger: AAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAGTACACAGCTAACAGATGCGTCGAGACCTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR TCA 90 bp ACAGCTTACAGAGGCGTTCAAAGTAGTGACGCAGTGAGGTCTGAATaGACACGGAGGATTTTATTACTCACCATTAATGGTAGTGAAATG +
Preference number: 1 (lower is better)
Translates to: TAYRGVQSSDAVRSE*TRRILLLTINGSEM
Trigger: CATTTCACTACCATTAATGGTGAGTAATAAAATCCTCCGTGTTCATTCAGACCTCACTGCGTCACTACTTTGAACGCCTCTGTAAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CAA 90 bp TGGAGCCCCGGGTTCCGCAGGCCGGGCTACATGGCCTTCATGCCGTaGGCCGTGGCACCCTCGGGCAGTGTGTCACCCGCGGCTGCGGCA +
Preference number: 2 (lower is better)
Translates to: WSPGFRRPGYMAFMP*AVAPSGSVSPAAAA
Trigger: TGCCGCAGCCGCGGGTGACACACTGCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACCCGGGGCTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR TCA 90 bp GCAGTGGCTGCTCCCCCTTCTTGTGCGGCAGCAGCGGCTGGCGCGTGTAGTGCTGCCGAGCTGCAGGAGTaGGGCCAGGGCGGTGAGGAT +
Preference number: 2 (lower is better)
Translates to: AVAAPPSCAAAAAGACSAAELQE*GQGGED
Trigger: ATCCTCACCGCCCTGGCCTCACTCCTGCAGCTCGGC...AGCACTACACGCGCCAGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCCACTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR TCA 90 bp GGGTTCCGCAGGCCGGGCTACATGGCCTTCATGCCGTTGGCCGTGGCACCCTCGGGTTGTGCAGCTCGATaGTGGGTGCCGTCAGCATGC +
Preference number: 2 (lower is better)
Translates to: GFRRPGYMAFMPLAVAPSGCAAR*WVPSAC
Trigger: GCATGCTGACGGCACCCATCATCGAGCTGCACAACC...CGAGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR GCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCTGGGTGCCGTCAGCATaGCGAAGCCCGCGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPWVPSA*RSPRWP
Trigger: TGGCCAGCGCGGGCTTCGGCATGCTGACGGCACCCA...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR GCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCTGTGTCACCCGCGGCTaGGGCATCGTGGAGGCCCGA +
Preference number: 2 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPCVTRG*GIVEAR
Trigger: TCGGGCCTCCACGATGCCGCAGCCGCGGGTGACACA...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CAA 90 bp CCGGCGGGCCCAGATGCGTATCAGGCTTGGGTGGGTCCTGCCACCTaGCTCACTTGGTACCGGATTTCCCGGGGCTGTGCCCACAGGGAA +
Preference number: 2 (lower is better)
Translates to: PAGPDAYQAWVGPAT*LTWYRISRGCAHRE
Trigger: TTCCCTGTGGGCACAGCCCCGGGAAATCCGGTACCAAGTGAGCAAGGTGGCAGGACCCACCCAAGCCTGATACGCATCTGGGCCCGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp GGGTTCCGCAGGCCGGGCTACATGGCCTTCATGCCGTTGGCCGTGGCACCCTCGGCAGACTCAAACTGCTaGGTGGCCATTAGCCACCGG +
Preference number: 2 (lower is better)
Translates to: GFRRPGYMAFMPLAVAPSADSNC*VAISHR
Trigger: CCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGC...CGAGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR TCA 90 bp GCAGTGGCTGCTCCCCCTTCTTGTGCGGCAGCAGCGGCTGGCGCGTGTAGTGCTCTGGTATCACACCCTTaGTGTCGCCCTCAGGGTTCA +
Preference number: 2 (lower is better)
Translates to: AVAAPPSCAAAAAGACSALVSHP*CRPQGS
Trigger: TGAACCCTGAGGGCGACATCAAGGGTGTGATACCAG...AGCACTACACGCGCCAGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCCACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR CCA 90 bp ACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGCTGCCCCAGACCCTaGAGCCCCGGGTTCCGCAGG +
Preference number: 2 (lower is better)
Translates to: TRAACARGTFLLEPIWERSCPRP*SPGFRR
Trigger: CCTGCGGAACCCGGGGCTCCAGGGTCTGGGGCAGCT...CCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR TCA 90 bp GTGTCGGCGTGGTCCAGCCACTGGAAACACGTGGCCAAGAGTCTGCTTGCCCCTCCCTGGAGTGATGTCTaGGGTGACGGCCATCCAAGC +
Preference number: 2 (lower is better)
Translates to: VSAWSSHWKHVAKSLLAPPWSDV*GDGHPS
Trigger: GCTTGGATGGCCGTCACCTCAGACATCACTCCAGGG...AGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGCTGGACCACGCCGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp GAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGAAGGGGCTCCTGGGTGCTaGCAGGAGCCGTGTCCCATC +
Preference number: 2 (lower is better)
Translates to: EAGGHLDSPMRNLRSLPEGAPGC*QEPCPI
Trigger: GATGGGACACGGCTCCTGGCAGCACCCAGGAGCCCC...TTCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp CCGGGTTCCGCAGGCCGGGCTACATGGCCTTCATGCCGTTGGCCGTGGCACCCTGTGAGCTGCTTTCCCTaGACACGAACAGAAGCTCTT +
Preference number: 2 (lower is better)
Translates to: PGSAGRATWPSCRWPWHPVSCFP*TRTEAL
Trigger: AAGAGCTTCTGTTCGTGTGCAGGGAAAGCAGCTCAC...AGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR CCA 90 bp AGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATTGCGTGTTCGGTCCCTaGTCTGTAAACCTGTGCCCA +
Preference number: 2 (lower is better)
Translates to: SRVPSPQRDRPWPWSLWHCVFGP*SVNLCP
Trigger: TGGGCACAGGTTTACAGACCAGGGACCGAACACGCA...ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGCAGAGGGACCGGCCATaGCCCTGGTCACTGTGGCAT +
Preference number: 2 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGQRDRP*PWSLWH
Trigger: ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTG...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCTGTGTGCTCAAGGTGTaGGTGACGGGCGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPCVLKV*VTGVCV
Trigger: CACACACACGCCCGTCACCCACACCTTGAGCACACA...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR CAA 90 bp CCCAGATGCGTATCAGGCTTGGGTGGGTCCTGCCACCTTGCTCACTaGGTACCGGATTTCCCGGGGCTGTGCCCACAGGGAAGTGTTGCT +
Preference number: 2 (lower is better)
Translates to: PRCVSGLGGSCHLAH*VPDFPGLCPQGSVA
Trigger: AGCAACACTTCCCTGTGGGCACAGCCCCGGGAAATCCGGTACCAAGTGAGCAAGGTGGCAGGACCCACCCAAGCCTGATACGCATCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR TCA 90 bp CCGTTAGAAATGTTCTCAGGCAGGTTCTGGTCCCTGCTCTCGGGCAGCAGGAGGCACAGAAGAACACGCTaGGGCTCCCCACCGCATGGG +
Preference number: 2 (lower is better)
Translates to: PLEMFSGRFWSLLSGSRRHRRTR*GSPPHG
Trigger: CCCATGCGGTGGGGAGCCTCAGCGTGTTCTTCTGTG...CCTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAACATTTCTAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR GCA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGTGCCGGCACAAGAGCTaGCTGTGCACGAGGGACTTT +
Preference number: 2 (lower is better)
Translates to: APPLCYASDCKQEAGPGRCRHKS*LCTRDF
Trigger: AAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCA...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR GCA 90 bp CGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGCAGGTTCTGGTCCCTaGTCTCGGGCAGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: REAGGHLDSPMRNLRSLPAGSGP*SRAAGG
Trigger: TCCTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGC...GGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR CCA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGTGTGTGCTCAAGGTGTaGGTGACGGGCGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: APPLCYASDCKQEAGPGRCVLKV*VTGVCV
Trigger: CACACACACGCCCGTCACCCACACCTTGAGCACACA...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR CCA 90 bp GTAGTCCTTGAGCTCGGCGTTGGTGAGCAGCAGTGGCTGCTCCCCCTTCTTGTGCTGGCAAAGCAGTGGTaGATCCCGTACCCCGTCAGC +
Preference number: 2 (lower is better)
Translates to: VVLELGVGEQQWLLPLLVLAKQW*IPYPVS
Trigger: GCTGACGGGGTACGGGATCCACCACTGCTTTGCCAG...CACAAGAAGGGGGAGCAGCCACTGCTGCTCACCAACGCCGAGCTCAAGGACTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR CCA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGCTCCTGGCAAAGCAGTaGTGGATCCCGTACCCCGTC +
Preference number: 2 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGLLAKQ*WIPYPV
Trigger: GACGGGGTACGGGATCCACCACTGCTTTGCCAGGAG...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR GCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCAGGGGCTCCTGGGTGCTaGCAGGAGCCGTGTCCCATC +
Preference number: 2 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSGAPGC*QEPCPI
Trigger: GATGGGACACGGCTCCTGGCAGCACCCAGGAGCCCC...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGACGGCGTCTGTGAGCTaGTTTCCCTGCACACGAACA +
Preference number: 2 (lower is better)
Translates to: APPLCYASDCKQEAGPGRTASVS*FPCTRT
Trigger: TGTTCGTGTGCAGGGAAAGCAGCTCACAGACGCCGT...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR CCA 90 bp ATCCAGCCTCTGCCTCTGACTACCTTTAAGACCAGGACTCGAAGCAGAGTGAGAAGCTGCCCCAGACCCTaGAGCCCCGGGTTCCGCAGG +
Preference number: 2 (lower is better)
Translates to: IQPLPLTTFKTRTRSRVRSCPRP*SPGFRR
Trigger: CCTGCGGAACCCGGGGCTCCAGGGTCTGGGGCAGCT...TCTCACTCTGCTTCGAGTCCTGGTCTTAAAGGTAGTCAGAGGCAGAGGCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCAGCTGCCCCAGACCCTaGAGCCCCGGGTTCCGCAGG +
Preference number: 2 (lower is better)
Translates to: RVCLLRPALLGLLERQDFSCPRP*SPGFRR
Trigger: CCTGCGGAACCCGGGGCTCCAGGGTCTGGGGCAGCT...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR-3UTR CCA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGATTGAGAGGCTCAGCTTaGCTGAGGCAGCTTTCCCAC +
Preference number: 2 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRLRGSA*LRQLSH
Trigger: GTGGGAAAGCTGCCTCAGCCAAGCTGAGCCTCTCAA...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR-3UTR CCA 90 bp GTGTCGGCGTGGTCCAGCCACTGGAAACACGTGGCCAAGAGTCTGCTTGCCCCTCCGACCCGCGCTCCTTaGACTTTTGGAAAGACAGGA +
Preference number: 2 (lower is better)
Translates to: VSAWSSHWKHVAKSLLAPPTRAP*TFGKTG
Trigger: TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGG...AGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGCTGGACCACGCCGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp GCCAGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCGTTCTCACTGCCTCTTaGGCGCCTCGGGGTTGGGTC +
Preference number: 2 (lower is better)
Translates to: ARRSDTDIFPGPRVAPCSVLTAS*APRGWV
Trigger: GACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAAC...GGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
3UTR-3UTR CCA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGACACCAGCGCGATGCTaGCCGTGGTATAGTAGTCAG +
Preference number: 2 (lower is better)
Translates to: APPLCYASDCKQEAGPGRTPARC*PWYSSQ
Trigger: CTGACTACTATACCACGGCCAGCATCGCGCTGGTGT...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CAA 90 bp TACCTCGGGCCGGGCGGTGTGACCTCACAGGCCCACTTATGGCACTaGCAGTTTGGGATTGCTCATTTGGCTCTAGGAAGCGGTGGTGTC +
Preference number: 2 (lower is better)
Translates to: YLGPGGVTSQAHLWH*QFGIAHLALGSGGV
Trigger: GACACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATAAGTGGGCCTGTGAGGTCACACCGCCCGGCCCGAGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR TCA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGATTTGGACTCACCTATaGGGAATCTCCGCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: APPLCYASDCKQEAGPGRIWTHL*GISAPC
Trigger: GCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAAT...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR TCA 90 bp GTAGTCCTTGAGCTCGGCGTTGGTGAGCAGCAGTGGCTGCTCCCCCTTCTTGTGACTTTCCAATCAGGTTaGGGAGGCCGAGCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: VVLELGVGEQQWLLPLLVTFQSG*GGRAAG
Trigger: TCCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGT...CACAAGAAGGGGGAGCAGCCACTGCTGCTCACCAACGCCGAGCTCAAGGACTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR TCA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGATGCAGCAGGCAAAGATaGTGTGGTGCAGGAAGTAGC +
Preference number: 2 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRCSRQR*CGAGSS
Trigger: GCTACTTCCTGCACCACATCATCTTTGCCTGCTGCA...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR GCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCATCCACGGTCCTCTCCTaGCTCTGCACGCAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSSTVLS*LCTQAG
Trigger: GCCTGCCTGCGTGCAGAGGCAGGAGAGGACCGTGGA...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp TCGGTTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGTCCACGGTCCTCTCCTaGCTCTGCACGCAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: SVGSHFIVSPRPETTISLSTVLS*LCTQAG
Trigger: GCCTGCCTGCGTGCAGAGGCAGGAGAGGACCGTGGA...CAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCGTGAGCTGCTTTCCCTaGACACGAACAGAAGCTCTT +
Preference number: 2 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPVSCFP*TRTEAL
Trigger: AAGAGCTTCTGTTCGTGTGCAGGGAAAGCAGCTCAC...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR GCA 90 bp GTGAGGATCATGAAGAGCAGCAGCCCTCCCCTGCGCCCGAGGAATCGGACCACCGAGGATCAGCCTCTTTaGAGACTCAAACTGCTGGGT +
Preference number: 2 (lower is better)
Translates to: VRIMKSSSPPLRPRNRTTEDQPL*RLKLLG
Trigger: ACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTC...GGTGGTCCGATTCCTCGGGCGCAGGGGAGGGCTGCTGCTCTTCATGATCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR GCA 90 bp CCGTTAGAAATGTTCTCAGGCAGGTTCTGGTCCCTGCTCTCGGGCAGCAGGAGGCCACCACCTTCACGATaGAGACCTTCTTGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: PLEMFSGRFWSLLSGSRRPPPSR*RPSWAS
Trigger: GGAGGCCCAAGAAGGTCTGCATCGTGAAGGTGGTGG...CCTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAACATTTCTAACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR GCA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAATTGAGGAGGCCGAGCTaGAGGAGTGAGGCCAGGGCG +
Preference number: 2 (lower is better)
Translates to: ACARGTFLLEPIWERRNKLRRPS*RSEARA
Trigger: CGCCCTGGCCTCACTCCTGCAGCTCGGCCTCCTCAA...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR GCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGGTGAGCAGCAGTGGCTaGTCCCCCTTCTTGTGCGGC +
Preference number: 2 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLVSSSG*SPFLCG
Trigger: GCCGCACAAGAAGGGGGAGCAGCCACTGCTGCTCAC...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR CCA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTAGCTGCCCCAGACCCTaGAGCCCCGGGTTCCGCAGG +
Preference number: 2 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFSCPRP*SPGFRR
Trigger: CCTGCGGAACCCGGGGCTCCAGGGTCTGGGGCAGCT...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR-3UTR CCA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGTTGAGAGGCTCAGCTTaGCTGAGGCAGCTTTCCCAC +
Preference number: 2 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGLRGSA*LRQLSH
Trigger: GTGGGAAAGCTGCCTCAGCCAAGCTGAGCCTCTCAA...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR CCA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGACCGGCCATGGCCCTaGTCACTGTGGCATCTTCCC +
Preference number: 2 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPDRPWP*SLWHLP
Trigger: GGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTC...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGGAGGGACTTTTCTGCTaGAGCCAATCTGGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: APPLCYASDCKQEAGPGREGLFC*SQSGRG
Trigger: TCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTC...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR GCA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCATGGTCTGTAAACCTGTaGCCAAGCTGCCCCAGACCC +
Preference number: 2 (lower is better)
Translates to: LLRPALLGLLERQDFPTPWSVNL*PSCPRP
Trigger: GGGTCTGGGGCAGCTTGGGCACAGGTTTACAGACCA...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR-3UTR GCA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGTCTTCCCAGAGCAACTaGGTCTCGCTGCCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: PALLGLLERQDFPTPVERSSQSN*VSLPRE
Trigger: CTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGA...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGATCACTCCGTCTAAAATaGAGTCCCGGAAACGCTCCA +
Preference number: 2 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRSLRLK*SPGNAP
Trigger: TGGAGCGTTTCCGGGACTGCATTTTAGACGGAGTGA...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp CCGGGTTCCGCAGGCCGGGCTACATGGCCTTCATGCCGTTGGCCGTGGCACCCTTGGCGATATGACTGCTaGTCAATTAAGATTTCTGGT +
Preference number: 2 (lower is better)
Translates to: PGSAGRATWPSCRWPWHPWRYDC*SIKISG
Trigger: ACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCA...AGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR GCA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAAGGAATCTCCGCTCCCTaGCCGAAGCCCCACCTCTGT +
Preference number: 2 (lower is better)
Translates to: ACARGTFLLEPIWERRNKGISAP*PKPHLC
Trigger: ACAGAGGTGGGGCTTCGGGCAGGGAGCGGAGATTCC...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR GCA 90 bp GAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGAACCTCGTGGCCCATCATaGTCCTGGCAAAGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: EAGGHLDSPMRNLRSLPEPRGPS*SWQSSG
Trigger: ACCACTGCTTTGCCAGGAGCATGATGGGCCACGAGG...TTCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR CCA 90 bp CGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCTGCGTGTTCGGTCCCTaGTCTGTAAACCTGTGCCCA +
Preference number: 2 (lower is better)
Translates to: REAGGHLDSPMRNLRSLPCVFGP*SVNLCP
Trigger: TGGGCACAGGTTTACAGACCAGGGACCGAACACGCA...GGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR CCA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAAGACCGGCCATGGCCCTaGTCACTGTGGCATCTTCCC +
Preference number: 2 (lower is better)
Translates to: ACARGTFLLEPIWERRNKDRPWP*SLWHLP
Trigger: GGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTC...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR CAA 90 bp TGTCGGCGTGGTCCAGCCACTGGAAACACGTGGCCAAGAGTCTGCTaGCCCCTTGCTGTGTCTTTACACATCTCCAGGCCCTTACTGATG +
Preference number: 2 (lower is better)
Translates to: CRRGPATGNTWPRVC*PLAVSLHISRPLLM
Trigger: CATCAGTAAGGGCCTGGAGATGTGTAAAGACACAGCAAGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGCTGGACCACGCCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTTGGTCTGTAAACCTGTaGCCAAGCTGCCCCAGACCC +
Preference number: 2 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPWSVNL*PSCPRP
Trigger: GGGTCTGGGGCAGCTTGGGCACAGGTTTACAGACCA...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR GCA 90 bp CTGTCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGGTCCTCTCCTGCCTCTaGACGCAGGCAGGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: LSLSRLGCPTSFLRKCQEVLSCL*TQAGSL
Trigger: CAGGCTGCCTGCCTGCGTGCAGAGGCAGGAGAGGAC...CTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp ATCCAGCCTCTGCCTCTGACTACCTTTAAGACCAGGACTCGAAGCAGAGTGAGAGGAATCTCCGCTCCCTaGCCGAAGCCCCACCTCTGT +
Preference number: 2 (lower is better)
Translates to: IQPLPLTTFKTRTRSRVRGISAP*PKPHLC
Trigger: ACAGAGGTGGGGCTTCGGGCAGGGAGCGGAGATTCC...TCTCACTCTGCTTCGAGTCCTGGTCTTAAAGGTAGTCAGAGGCAGAGGCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGAGTCTGCTTGCCCCTTaGTGTGTCTTTACACATCTC +
Preference number: 2 (lower is better)
Translates to: APPLCYASDCKQEAGPGRSLLAP*CVFTHL
Trigger: GAGATGTGTAAAGACACAGCAAGGGGCAAGCAGACT...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp CCCGTTAGAAATGTTCTCAGGCAGGTTCTGGTCCCTGCTCTCGGGCAGCAGGAGCATGGGAGGCAAACATaGCCACGATGGAAAACGCGA +
Preference number: 2 (lower is better)
Translates to: PVRNVLRQVLVPALGQQEHGRQT*PRWKTR
Trigger: TCGCGTTTTCCATCGTGGGCATGTTTGCCTCCCATG...CTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAACATTTCTAACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR CCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGTTGAGAGGCTCAGCTTaGCTGAGGCAGCTTTCCCAC +
Preference number: 2 (lower is better)
Translates to: CVSLPREVIPFVISERERLRGSA*LRQLSH
Trigger: GTGGGAAAGCTGCCTCAGCCAAGCTGAGCCTCTCAA...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp GGCATCTTCCCAGAGCAACTGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTCCGACCCGCGCTCCTTaGACTTTTGGAAAGACAGGA +
Preference number: 2 (lower is better)
Translates to: GIFPEQLRLAAQGGDSICPTRAP*TFGKTG
Trigger: TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGG...ACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGACTGCTGGAGCCAATCTaGGAGAGGAGGAATAAAAAC +
Preference number: 2 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRLLEPI*ERRNKN
Trigger: GTTTTTATTCCTCCTCTCCCAGATTGGCTCCAGCAG...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR GCA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAATCCACGGTCCTCTCCTaGCTCTGCACGCAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCESTVLS*LCTQAG
Trigger: GCCTGCCTGCGTGCAGAGGCAGGAGAGGACCGTGGA...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTACGGCGTCTGTGAGCTaGTTTCCCTGCACACGAACA +
Preference number: 2 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPTASVS*FPCTRT
Trigger: TGTTCGTGTGCAGGGAAAGCAGCTCACAGACGCCGT...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR GCA 90 bp TACATACAAATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGACCTCCCCCGCACATaGGATACCTCGGGCCGGGCG +
Preference number: 2 (lower is better)
Translates to: YIQIFPKGTTDATPCRHADLPRT*DTSGRA
Trigger: CGCCCGGCCCGAGGTATCGCATGTGCGGGGGAGGTC...TGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATTTGTATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGCTGCTGGAGCCAATCTaGGAGAGGAGGAATAAAAAC +
Preference number: 2 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGLLEPI*ERRNKN
Trigger: GTTTTTATTCCTCCTCTCCCAGATTGGCTCCAGCAG...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR CCA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAAGACGGTGCTGGGAAGTaGGCAGCCGTAGCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCEDGAGK*AAVAAS
Trigger: GGAGGCTGCTACGGCTGCCCACTTCCCAGCACCGTC...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAAGGCCCATCATGCTCCTaGCAAAGCAGTGGTGGATCC +
Preference number: 2 (lower is better)
Translates to: ACARGTFLLEPIWERRNKGPSCS*QSSGGS
Trigger: GGATCCACCACTGCTTTGCCAGGAGCATGATGGGCC...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CAA 90 bp TCCAGAAAAGCTGGTGCCCAAGTTGCTACAAAGTGGTGCCTGCCCTaGCCAAGGAGGCTGTCTCTTAGTCGCCTTGGGTGTCCTACAAGT +
Preference number: 2 (lower is better)
Translates to: SRKAGAQVATKWCLP*PRRLSLSRLGCPTS
Trigger: ACTTGTAGGACACCCAAGGCGACTAAGAGACAGCCTCCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACATCTTCCCAGAGCAACTaGGTCTCGCTGCCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTSSQSN*VSLPRE
Trigger: CTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGA...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp ACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGGTGAGCTGCTTTCCCTaGACACGAACAGAAGCTCTT +
Preference number: 2 (lower is better)
Translates to: TRAACARGTFLLEPIWERVSCFP*TRTEAL
Trigger: AAGAGCTTCTGTTCGTGTGCAGGGAAAGCAGCTCAC...CCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR GCA 90 bp CGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCCCCCTTCTGTGGATTTaGCTCTGCCATCTTTTTGAG +
Preference number: 2 (lower is better)
Translates to: REAGGHLDSPMRNLRSLPPLLWI*LCHLFE
Trigger: CTCAAAAAGATGGCAGAGGCAAATCCACAGAAGGGG...GGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR CCA 90 bp AAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACGCTAGCTGCCCCAGACCCTaGAGCCCCGGGTTCCGCAGG +
Preference number: 2 (lower is better)
Translates to: KAKFMYISLRLKCSPGNASCPRP*SPGFRR
Trigger: CCTGCGGAACCCGGGGCTCCAGGGTCTGGGGCAGCT...AGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCACCGACCCGCGCTCCTTaGACTTTTGGAAAGACAGGA +
Preference number: 2 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSPTRAP*TFGKTG
Trigger: TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGG...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR CCA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGGAGGGACTTTTCTGCTaGAGCCAATCTGGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: PALLGLLERQDFPTPVEREGLFC*SQSGRG
Trigger: TCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTC...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR CCA 90 bp CACGCAGCTGTGAACGACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGATCCCAGGTGTCGGCGTaGTCCAGCCACTGGAAACAC +
Preference number: 2 (lower is better)
Translates to: HAAVNDSSELSVSLCYERSQVSA*SSHWKH
Trigger: GTGTTTCCAGTGGCTGGACCACGCCGACACCTGGGA...TCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTCGTTCACAGCTGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp TGCTATGAACGAGCACCGTCAGAGAATTCCCACCCACACGTACAGAAACACAGTAGGACAGCTGTAGTGTaGACCTCCCCCGCACATGCG +
Preference number: 2 (lower is better)
Translates to: CYERAPSENSHPHVQKHSRTAVV*TSPAHA
Trigger: CGCATGTGCGGGGGAGGTCCACACTACAGCTGTCCT...ACTGTGTTTCTGTACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp CGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCCTCTTTCTCCAGCTCTaGTATCACACCCTTGATGTC +
Preference number: 2 (lower is better)
Translates to: REAGGHLDSPMRNLRSLPLFLQL*YHTLDV
Trigger: GACATCAAGGGTGTGATACCAGAGCTGGAGAAAGAG...GGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CAA 90 bp CAAAGTGGTGCCTGCCCTTGCCAAGGAGGCTGTCTCTTAGTCGCCTaGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGGAAACCT +
Preference number: 2 (lower is better)
Translates to: QSGACPCQGGCLLVA*GVLQVSSENAKRKP
Trigger: AGGTTTCCTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGACAGCCTCCTTGGCAAGGGCAGGCACCACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CAA 90 bp AATGCCAGTAAGAAGCCAGGCTGTCCAGAAAAGCTGGTGCCCAAGTaGCTACAAAGTGGTGCCTGCCCTTGCCAAGGAGGCTGTCTCTTA +
Preference number: 2 (lower is better)
Translates to: NASKKPGCPEKLVPK*LQSGACPCQGGCLL
Trigger: TAAGAGACAGCCTCCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGCTTCTTACTGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CAA 90 bp CTCACTTGGTACCGGATTTCCCGGGGCTGTGCCCACAGGGAAGTGTaGCTGCTCTGGCAACATTTCATAAAGGTGTTGCTCAACAGCTTC +
Preference number: 2 (lower is better)
Translates to: LTWYRISRGCAHREV*LLWQHFIKVLLNSF
Trigger: GAAGCTGTTGAGCAACACCTTTATGAAATGTTGCCAGAGCAGCAACACTTCCCTGTGGGCACAGCCCCGGGAAATCCGGTACCAAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR TCA 90 bp TCGGTTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGCTCCACTTTCTGGGGTaGAACGAGGAACACGAAGAG +
Preference number: 2 (lower is better)
Translates to: SVGSHFIVSPRPETTISLLHFLG*NEEHEE
Trigger: CTCTTCGTGTTCCTCGTTTCACCCCAGAAAGTGGAG...CAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp AGTTTCCTCCGAAAATGCCAAGAGGAAACCTCCACTTTCTGGGGTGAAACGAGGTGGTCTGTAAACCTGTaGCCAAGCTGCCCCAGACCC +
Preference number: 2 (lower is better)
Translates to: SFLRKCQEETSTFWGETRWSVNL*PSCPRP
Trigger: GGGTCTGGGGCAGCTTGGGCACAGGTTTACAGACCA...CCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACTGGTCTGTAAACCTGTaGCCAAGCTGCCCCAGACCC +
Preference number: 2 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDWSVNL*PSCPRP
Trigger: GGGTCTGGGGCAGCTTGGGCACAGGTTTACAGACCA...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR-3UTR GCA 90 bp TCTGTAGCCAAACCAATTTACCAGCCCGTCTTCCAGATGCAGGTGATCTTACTCTCTTCCCAGAGCAACTaGGTCTCGCTGCCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: SVAKPIYQPVFQMQVILLSSQSN*VSLPRE
Trigger: CTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGA...GAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp GAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGAACCCCTTCTGTGGATTTaGCTCTGCCATCTTTTTGAG +
Preference number: 2 (lower is better)
Translates to: EAGGHLDSPMRNLRSLPEPLLWI*LCHLFE
Trigger: CTCAAAAAGATGGCAGAGGCAAATCCACAGAAGGGG...TTCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR GCA 90 bp TTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGAAGTGCTATGCGAGTGACTaGAAGCAGGAAGCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: LEVTSLSHPGPRPQFPWKCYASD*KQEAGP
Trigger: TGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCA...CTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCTTGAGAGGCTCAGCTTaGCTGAGGCAGCTTTCCCAC +
Preference number: 2 (lower is better)
Translates to: RVCLLRPALLGLLERQDFLRGSA*LRQLSH
Trigger: GTGGGAAAGCTGCCTCAGCCAAGCTGAGCCTCTCAA...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR-3UTR CCA 90 bp TGCTATGAACGAGCACCGTCAGAGAATTCCCACCCACACGTACAGAAACACAGTAAGCAGCAGGCCGGGTaGAAAGCCAGAAGGGGAGAA +
Preference number: 2 (lower is better)
Translates to: CYERAPSENSHPHVQKHSKQQAG*KARRGE
Trigger: TTCTCCCCTTCTGGCTTTCCACCCGGCCTGCTGCTT...ACTGTGTTTCTGTACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp TTATGGCACTTGCAGTTTGGGATTGCTCATTTGGCTCTAGGAAGCGGTGGTGTCAAGCAGCAGGCCGGGTaGAAAGCCAGAAGGGGAGAA +
Preference number: 2 (lower is better)
Translates to: LWHLQFGIAHLALGSGGVKQQAG*KARRGE
Trigger: TTCTCCCCTTCTGGCTTTCCACCCGGCCTGCTGCTT...GACACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp GATGATGTGGTGCAGGAAGTAGCCTTTCTGGTTGTGCAGCTCGATGATGGGTGCGCGCGATGCTGGCCGTaGTATAGTAGTCAGCATAGA +
Preference number: 2 (lower is better)
Translates to: DDVVQEVAFLVVQLDDGCARCWP*YSSQHR
Trigger: TCTATGCTGACTACTATACCACGGCCAGCATCGCGC...GCACCCATCATCGAGCTGCACAACCAGAAAGGCTACTTCCTGCACCACATCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR CCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCACCTGAGTCTGGGTGCTaGCTGTACTTTCCAATCAGG +
Preference number: 2 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSPESGC*LYFPIR
Trigger: CCTGATTGGAAAGTACAGCCAGCACCCAGACTCAGG...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CAA 90 bp GAAGGACACAGCCCATGGCAAAGACATGCTTCGAGAAGGGATGAGTaGGACAATGCCAGTAAGAAGCCAGGCTGTCCAGAAAAGCTGGTG +
Preference number: 2 (lower is better)
Translates to: EGHSPWQRHASRRDE*DNASKKPGCPEKLV
Trigger: CACCAGCTTTTCTGGACAGCCTGGCTTCTTACTGGCATTGTCCAACTCATCCCTTCTCGAAGCATGTCTTTGCCATGGGCTGTGTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CAA 90 bp TGCAGACACGCAGCTGTGAACGACAGTTCAGAACTCAGCGTAAGCTaGTGCTATGAACGAGCACCGTCAGAGAATTCCCACCCACACGTA +
Preference number: 2 (lower is better)
Translates to: CRHAAVNDSSELSVS*CYERAPSENSHPHV
Trigger: TACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTCGTTCACAGCTGCGTGTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR TCA 90 bp CTGTCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGGGCCATCCAAGCTGGTaGTCTTCATGGTGTGTGCTC +
Preference number: 2 (lower is better)
Translates to: LSLSRLGCPTSFLRKCQEGHPSW*SSWCVL
Trigger: GAGCACACACCATGAAGATCACCAGCTTGGATGGCC...CTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR TCA 90 bp AGTTTCCTCCGAAAATGCCAAGAGGAAACCTCCACTTTCTGGGGTGAAACGAGGAGGCAGGGGCAGCGTTaGGCTTTGGTGAGTTATTGC +
Preference number: 2 (lower is better)
Translates to: SFLRKCQEETSTFWGETRRQGQR*ALVSYC
Trigger: GCAATAACTCACCAAAGCTCAACGCTGCCCCTGCCT...CCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR TCA 90 bp TCTGTAGCCAAACCAATTTACCAGCCCGTCTTCCAGATGCAGGTGATCTTACTCAGAGGGGTTCAAGCGTaGCAGACGGTGCTGGGAAGT +
Preference number: 2 (lower is better)
Translates to: SVAKPIYQPVFQMQVILLRGVQA*QTVLGS
Trigger: ACTTCCCAGCACCGTCTGTCACGCTTGAACCCCTCT...GAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp TCTGTAGCCAAACCAATTTACCAGCCCGTCTTCCAGATGCAGGTGATCTTACTCTGGTCTGTAAACCTGTaGCCAAGCTGCCCCAGACCC +
Preference number: 2 (lower is better)
Translates to: SVAKPIYQPVFQMQVILLWSVNL*PSCPRP
Trigger: GGGTCTGGGGCAGCTTGGGCACAGGTTTACAGACCA...GAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp ACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGTGTGGGGCTCCTGGGTGCTaGCAGGAGCCGTGTCCCATC +
Preference number: 2 (lower is better)
Translates to: TYRNTVFILQPQGQGGKCGAPGC*QEPCPI
Trigger: GATGGGACACGGCTCCTGGCAGCACCCAGGAGCCCC...ACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGCTGTGGCGATATGACTaGTGCTCAATTAAGATTTCT +
Preference number: 2 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGLWRYD*CSIKIS
Trigger: AGAAATCTTAATTGAGCAGCAGTCATATCGCCACAG...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR GCA 90 bp TCTGTAGCCAAACCAATTTACCAGCCCGTCTTCCAGATGCAGGTGATCTTACTCTGCCGGCACAAGAGCTaGCTGTGCACGAGGGACTTT +
Preference number: 2 (lower is better)
Translates to: SVAKPIYQPVFQMQVILLCRHKS*LCTRDF
Trigger: AAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCA...GAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp CACGCAGCTGTGAACGACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGAAGCTGGTGCCCAAGTTaGTACAAAGTGGTGCCTGCC +
Preference number: 2 (lower is better)
Translates to: HAAVNDSSELSVSLCYERSWCPS*YKVVPA
Trigger: GGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCT...TCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTCGTTCACAGCTGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAAGCTGAGGGTGATGGGTaGAGACGTACACCTGTCCAG +
Preference number: 2 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCEAEGDG*RRTPVQ
Trigger: CTGGACAGGTGTACGTCTGCACCCATCACCCTCAGC...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTGCGTGTTCGGTCCCTaGTCTGTAAACCTGTGCCCA +
Preference number: 2 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTCVFGP*SVNLCP
Trigger: TGGGCACAGGTTTACAGACCAGGGACCGAACACGCA...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR-3UTR CCA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTTGCGTGTTCGGTCCCTaGTCTGTAAACCTGTGCCCA +
Preference number: 2 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFCVFGP*SVNLCP
Trigger: TGGGCACAGGTTTACAGACCAGGGACCGAACACGCA...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR-3UTR CCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGTGCGTGTTCGGTCCCTaGTCTGTAAACCTGTGCCCA +
Preference number: 2 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLCVFGP*SVNLCP
Trigger: TGGGCACAGGTTTACAGACCAGGGACCGAACACGCA...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR-3UTR CCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGGTACTCACAAAGCTGTaGCGATATGACTGCTGCTCA +
Preference number: 2 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLVLTKL*RYDCCS
Trigger: TGAGCAGCAGTCATATCGCCACAGCTTTGTGAGTAC...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR CCA 90 bp ATCCAGCCTCTGCCTCTGACTACCTTTAAGACCAGGACTCGAAGCAGAGTGAGAAGACCACAATTTCCCTaGAAGGACACAGCCCATGGC +
Preference number: 2 (lower is better)
Translates to: IQPLPLTTFKTRTRSRVRRPQFP*KDTAHG
Trigger: GCCATGGGCTGTGTCCTTCCAGGGAAATTGTGGTCT...TCTCACTCTGCTTCGAGTCCTGGTCTTAAAGGTAGTCAGAGGCAGAGGCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp CACGCAGCTGTGAACGACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGATCCCCAACTGCCTACTaGCCTGGCTACTGGATAGGT +
Preference number: 2 (lower is better)
Translates to: HAAVNDSSELSVSLCYERSPTAY*PGYWIG
Trigger: ACCTATCCAGTAGCCAGGCCAGTAGGCAGTTGGGGA...TCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTCGTTCACAGCTGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CAA 90 bp TATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTaGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGCTCAGCTTG +
Preference number: 2 (lower is better)
Translates to: YFQRVCLLRPALLGL*ERQDFPTPVERLSL
Trigger: CAAGCTGAGCCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR CAA 90 bp GAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTaGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGC +
Preference number: 2 (lower is better)
Translates to: ERVISKEFVSSDPRS*DFWKDRISPHQLRG
Trigger: GCCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR-3UTR GCA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACACACGAGGGACTTTTCTaGTGGAGCCAATCTGGGAGA +
Preference number: 2 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTHEGLF*WSQSGR
Trigger: TCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTG...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR GCA 90 bp TCGGTTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGCCCCTTCTGTGGATTTaGCTCTGCCATCTTTTTGAG +
Preference number: 2 (lower is better)
Translates to: SVGSHFIVSPRPETTISLPLLWI*LCHLFE
Trigger: CTCAAAAAGATGGCAGAGGCAAATCCACAGAAGGGG...CAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAACCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp AAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACGCTGACCGGCCATGGCCCTaGTCACTGTGGCATCTTCCC +
Preference number: 2 (lower is better)
Translates to: KAKFMYISLRLKCSPGNADRPWP*SLWHLP
Trigger: GGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTC...AGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCAGTACTCACAAAGCTGTaGCGATATGACTGCTGCTCA +
Preference number: 2 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSVLTKL*RYDCCS
Trigger: TGAGCAGCAGTCATATCGCCACAGCTTTGTGAGTAC...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR CCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCACTGCTGGAGCCAATCTaGGAGAGGAGGAATAAAAAC +
Preference number: 2 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSLLEPI*ERRNKN
Trigger: GTTTTTATTCCTCCTCTCCCAGATTGGCTCCAGCAG...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR CCA 90 bp ATCTCAGGTCTCGACGCATCTGTTAGCTGTGTACTCACAAAGCTGTGGCGATATCGATGCAGACCTTCTTaGGCCTCCGGGAAAGCTCTT +
Preference number: 2 (lower is better)
Translates to: ISGLDASVSCVLTKLWRYRCRPS*ASGKAL
Trigger: AAGAGCTTTCCCGGAGGCCCAAGAAGGTCTGCATCG...ATATCGCCACAGCTTTGTGAGTACACAGCTAACAGATGCGTCGAGACCTGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR TCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCATCCATTTGTGATCAGTaGGAGGGAGAGGGAATAAAG +
Preference number: 2 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSSICDQ*EGEGIK
Trigger: CTTTATTCCCTCTCCCTCTCACTGATCACAAATGGA...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR TCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGTGCGATTCTTCTGTGTaGAGTGGAGGATCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLCDSSV*SGGSAS
Trigger: AGAGGCTGATCCTCCACTTCACACAGAAGAATCGCA...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR GCA 90 bp CCATACACAGACTCTAGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAAGTCCTCTCCTGCCTCTaGACGCAGGCAGGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: PYTDSSKSQIHVHFTPSKVLSCL*TQAGSL
Trigger: CAGGCTGCCTGCCTGCGTGCAGAGGCAGGAGAGGAC...TTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCTAGAGTCTGTGTATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp AGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACAGAGGGACCGGCCATaGCCCTGGTCACTGTGGCAT +
Preference number: 2 (lower is better)
Translates to: SKSQIHVHFTPSKMQSRKQRDRP*PWSLWH
Trigger: ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTG...TTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp CCCACACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAGCCACTGGAAACACGTaGCCAAGAGTCTGCTTGCCC +
Preference number: 2 (lower is better)
Translates to: PTRTETQFLYYNLKDREGATGNT*PRVCLP
Trigger: GGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGC...TCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGTGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp GACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGAGCACCGTCAGAGAATGTCAAGTTGAAACAGTaGGTGCCTGCGAAGGGTCTC +
Preference number: 2 (lower is better)
Translates to: DSSELSVSLCYERAPSENVKLKQ*VPAKGL
Trigger: GAGACCCTTCGCAGGCACCCACTGTTTCAACTTGAC...ATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR TCA 90 bp CCCACACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGATCTGTGCTATGCGAGTaGCTGCAAGCAGGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: PTRTETQFLYYNLKDREGSVLCE*LQAGSW
Trigger: CCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGA...TCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGTGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR TCA 90 bp TGCTATGAACGAGCACCGTCAGAGAATTCCCACCCACACGTACAGAAACACAGTCTTTTATTGAAAGGCTaGCAGGGTAGGCTAGCGGAA +
Preference number: 2 (lower is better)
Translates to: CYERAPSENSHPHVQKHSLLLKG*QGRLAE
Trigger: TTCCGCTAGCCTACCCTGTCAGCCTTTCAATAAAAG...ACTGTGTTTCTGTACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTTGGCGATATGACTGCTaGTCAATTAAGATTTCTGGT +
Preference number: 2 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPWRYDC*SIKISG
Trigger: ACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCA...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR GCA 90 bp TGCTATGAACGAGCACCGTCAGAGAATTCCCACCCACACGTACAGAAACACAGTCCCCTTCTGTGGATTTaGCTCTGCCATCTTTTTGAG +
Preference number: 2 (lower is better)
Translates to: CYERAPSENSHPHVQKHSPLLWI*LCHLFE
Trigger: CTCAAAAAGATGGCAGAGGCAAATCCACAGAAGGGG...ACTGTGTTTCTGTACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp TCTGTAGCCAAACCAATTTACCAGCCCGTCTTCCAGATGCAGGTGATCTTACTCGTGAGTGCTGTCCCTTaGCACCAACTTCCTAGAGAT +
Preference number: 2 (lower is better)
Translates to: SVAKPIYQPVFQMQVILLVSAVP*HQLPRD
Trigger: ATCTCTAGGAAGTTGGTGGCAAGGGACAGCACTCAC...GAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp CGGAGGATTTTATTACTCACCATTAATGGTAGTGAAATGCCCTTCGGTGGATACGATTTCCCGGGGCTGTaGCCACAGGGAAGTGTTGCT +
Preference number: 2 (lower is better)
Translates to: RRILLLTINGSEMPFGGYDFPGL*PQGSVA
Trigger: AGCAACACTTCCCTGTGGGCACAGCCCCGGGAAATC...GTATCCACCGAAGGGCATTTCACTACCATTAATGGTGAGTAATAAAATCCTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp CAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTTACAGAGGGACCGGCCATaGCCCTGGTCACTGTGGCAT +
Preference number: 2 (lower is better)
Translates to: QSCGDMTAAQLRFLVKCLQRDRP*PWSLWH
Trigger: ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTG...TAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp TTATGGCACTTGCAGTTTGGGATTGCTCATTTGGCTCTAGGAAGCGGTGGTGTCCTGCTGGAGCCAATCTaGGAGAGGAGGAATAAAAAC +
Preference number: 2 (lower is better)
Translates to: LWHLQFGIAHLALGSGGVLLEPI*ERRNKN
Trigger: GTTTTTATTCCTCCTCTCCCAGATTGGCTCCAGCAG...GACACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp CGGAGGATTTTATTACTCACCATTAATGGTAGTGAAATGCCCTTCGGTGGATACTGTGTGCTCAAGGTGTaGGTGACGGGCGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: RRILLLTINGSEMPFGGYCVLKV*VTGVCV
Trigger: CACACACACGCCCGTCACCCACACCTTGAGCACACA...GTATCCACCGAAGGGCATTTCACTACCATTAATGGTGAGTAATAAAATCCTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp TTATGGCACTTGCAGTTTGGGATTGCTCATTTGGCTCTAGGAAGCGGTGGTGTCGCTGTCCAGAAAAGCTaGTGCCCAAGTTGCTACAAA +
Preference number: 2 (lower is better)
Translates to: LWHLQFGIAHLALGSGGVAVQKS*CPSCYK
Trigger: TTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGC...GACACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp CCCACACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGATGTGTGGACCGCATGTaGAGGAGACATGAGTGGCGA +
Preference number: 2 (lower is better)
Translates to: PTRTETQFLYYNLKDREGCVDRM*RRHEWR
Trigger: TCGCCACTCATGTCTCCTCCACATGCGGTCCACACA...TCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGTGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp TACATACAAATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCATGTGTGGACCGCATGTaGAGGAGACATGAGTGGCGA +
Preference number: 2 (lower is better)
Translates to: YIQIFPKGTTDATPCRHACVDRM*RRHEWR
Trigger: TCGCCACTCATGTCTCCTCCACATGCGGTCCACACA...TGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATTTGTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAAAACTGCCTACTGGCCTaGCTACTGGATAGGTCCTAT +
Preference number: 2 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCENCLLA*LLDRSY
Trigger: ATAGGACCTATCCAGTAGCCAGGCCAGTAGGCAGTT...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR TCA 90 bp ATCCAGCCTCTGCCTCTGACTACCTTTAAGACCAGGACTCGAAGCAGAGTGAGAGCAGTGAGGTCTGAATaGACACGGAGGATTTTATTA +
Preference number: 2 (lower is better)
Translates to: IQPLPLTTFKTRTRSRVRAVRSE*TRRILL
Trigger: TAATAAAATCCTCCGTGTTCATTCAGACCTCACTGC...TCTCACTCTGCTTCGAGTCCTGGTCTTAAAGGTAGTCAGAGGCAGAGGCTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp TCTGTAGCCAAACCAATTTACCAGCCCGTCTTCCAGATGCAGGTGATCTTACTCAGTCTGCTTGCCCCTTaGTGTGTCTTTACACATCTC +
Preference number: 2 (lower is better)
Translates to: SVAKPIYQPVFQMQVILLSLLAP*CVFTHL
Trigger: GAGATGTGTAAAGACACAGCAAGGGGCAAGCAGACT...GAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp CAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTTACAGCTCGATGATGGGTaGCGTCAGCATGCCGAAGCC +
Preference number: 2 (lower is better)
Translates to: QSCGDMTAAQLRFLVKCLQLDDG*RQHAEA
Trigger: GGCTTCGGCATGCTGACGGCACCCATCATCGAGCTG...TAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR CCA 90 bp TCTGTAGCCAAACCAATTTACCAGCCCGTCTTCCAGATGCAGGTGATCTTACTCGTACTCACAAAGCTGTaGCGATATGACTGCTGCTCA +
Preference number: 2 (lower is better)
Translates to: SVAKPIYQPVFQMQVILLVLTKL*RYDCCS
Trigger: TGAGCAGCAGTCATATCGCCACAGCTTTGTGAGTAC...GAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp TTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGAAGCTGTGGCGATATGACTaGTGCTCAATTAAGATTTCT +
Preference number: 2 (lower is better)
Translates to: LEVTSLSHPGPRPQFPWKLWRYD*CSIKIS
Trigger: AGAAATCTTAATTGAGCAGCAGTCATATCGCCACAG...CTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAACATGACACACCATACTaGTTTTCCAAAACACACGGG +
Preference number: 2 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCEHDTPY*FSKTHG
Trigger: CCCGTGTGTTTTGGAAAAGCAGTATGGTGTGTCATG...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp AGTGAGACTGCTCGCAACTTTCATCACTTAGCATATCCTTCCACAACACAGTACGAAGGACACAGCCCATaGCAAAGACATGCTTCGAGA +
Preference number: 2 (lower is better)
Translates to: SETARNFHHLAYPSTTQYEGHSP*QRHASR
Trigger: TCTCGAAGCATGTCTTTGCCATGGGCTGTGTCCTTC...GTACTGTGTTGTGGAAGGATATGCTAAGTGATGAAAGTTGCGAGCAGTCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CAA 90 bp TTAACGGCAGAAAAGAAAGTCTTGAAAGGGTTATTTCCAAAGAGTTaGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGA +
Preference number: 2 (lower is better)
Translates to: LTAEKKVLKGLFPKS*SPPTRAPWTFGKTG
Trigger: TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAAGACTTTCTTTTCTGCCGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR CAA 90 bp GCACACGAACAGAAGCTCTTACATTTAACGGCAGAAAAGAAAGTCTaGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCT +
Preference number: 2 (lower is better)
Translates to: AHEQKLLHLTAEKKV*KGLFPKSLSPPTRA
Trigger: AGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAAGACTTTCTTTTCTGCCGTTAAATGTAAGAGCTTCTGTTCGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR GCA 90 bp CTCACAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTCACTCCGTCTAAAATaGAGTCCCGGAAACGCTCCA +
Preference number: 2 (lower is better)
Translates to: LTKLWRYDCCSIKISGEMSLRLK*SPGNAP
Trigger: TGGAGCGTTTCCGGGACTGCATTTTAGACGGAGTGA...CATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp ACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGTGTAGACCACAATTTCCCTaGAAGGACACAGCCCATGGC +
Preference number: 2 (lower is better)
Translates to: TYRNTVFILQPQGQGGKCRPQFP*KDTAHG
Trigger: GCCATGGGCTGTGTCCTTCCAGGGAAATTGTGGTCT...ACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp TGCTATGAACGAGCACCGTCAGAGAATTCCCACCCACACGTACAGAAACACAGTTATTGTCATTTGAGGTaGAGATCAGAGATCATGACC +
Preference number: 2 (lower is better)
Translates to: CYERAPSENSHPHVQKHSYCHLR*RSEIMT
Trigger: GGTCATGATCTCTGATCTCCACCTCAAATGACAATA...ACTGTGTTTCTGTACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR TCA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAAAGCGTTGAGCTTTGGTaGGTTATTGCTTTCTTTCAA +
Preference number: 2 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCESVELW*VIAFFQ
Trigger: TTGAAAGAAAGCAATAACTCACCAAAGCTCAACGCT...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR TCA 90 bp CTCACAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTGGAAAATTTGTCCTTaGCGCTGTCACTCATCCCTG +
Preference number: 2 (lower is better)
Translates to: LTKLWRYDCCSIKISGEMWKICP*RCHSSL
Trigger: CAGGGATGAGTGACAGCGTCAAGGACAAATTTTCCA...CATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR TCA 90 bp CAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTTATTATCACCGTCGGGGTaGTCTCCGCACAGAAGAACA +
Preference number: 2 (lower is better)
Translates to: QSCGDMTAAQLRFLVKCLLSPSG*SPHRRT
Trigger: TGTTCTTCTGTGCGGAGATCACCCCGACGGTGATAA...TAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR TCA 90 bp AAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACGCTTCCATTTGTGATCAGTaGGAGGGAGAGGGAATAAAG +
Preference number: 2 (lower is better)
Translates to: KAKFMYISLRLKCSPGNASICDQ*EGEGIK
Trigger: CTTTATTCCCTCTCCCTCTCACTGATCACAAATGGA...AGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp ACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGTGTGTCCAGAAAAGCTGGTaGCCAAGTTGCTACAAAGTG +
Preference number: 2 (lower is better)
Translates to: TYRNTVFILQPQGQGGKCVQKSW*PSCYKV
Trigger: CACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGAC...ACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp CAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTTATTTGCAGACTCAAACTaGTGGGTGGCCATTAGCCAC +
Preference number: 2 (lower is better)
Translates to: QSCGDMTAAQLRFLVKCLFADSN*WVAISH
Trigger: GTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAA...TAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR CCA 90 bp ACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGTGTGGGTTTGTTGACAGGTaGCTTTATAGCAAGTACTCC +
Preference number: 2 (lower is better)
Translates to: TYRNTVFILQPQGQGGKCGFVDR*LYSKYS
Trigger: GGAGTACTTGCTATAAAGCCACCTGTCAACAAACCC...ACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp ACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGTGTATGGCACTTGCAGTTTaGGATTGCTCATTTGGCTCT +
Preference number: 2 (lower is better)
Translates to: TYRNTVFILQPQGQGGKCMALAV*DCSFGS
Trigger: AGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCAT...ACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CCA 90 bp CGGAGGATTTTATTACTCACCATTAATGGTAGTGAAATGCCCTTCGGTGGATACTATTGTCATTTGAGGTaGAGATCAGAGATCATGACC +
Preference number: 2 (lower is better)
Translates to: RRILLLTINGSEMPFGGYYCHLR*RSEIMT
Trigger: GGTCATGATCTCTGATCTCCACCTCAAATGACAATA...GTATCCACCGAAGGGCATTTCACTACCATTAATGGTGAGTAATAAAATCCTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CAA 90 bp AATGACCAAAATAAATACACACATTTAACGGCAGAAAAGAAAGTCTaGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCT +
Preference number: 2 (lower is better)
Translates to: NDQNKYTHLTAEKKV*KGLFPKSLSPPTRA
Trigger: AGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAAGACTTTCTTTTCTGCCGTTAAATGTGTGTATTTATTTTGGTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR TCA 90 bp ACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGTGTAGCGTTGAGCTTTGGTaGGTTATTGCTTTCTTTCAA +
Preference number: 2 (lower is better)
Translates to: TYRNTVFILQPQGQGGKCSVELW*VIAFFQ
Trigger: TTGAAAGAAAGCAATAACTCACCAAAGCTCAACGCT...ACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR GCA 90 bp ACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGTGTTGGCGATATGACTGCTaGTCAATTAAGATTTCTGGT +
Preference number: 2 (lower is better)
Translates to: TYRNTVFILQPQGQGGKCWRYDC*SIKISG
Trigger: ACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCA...ACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp GCAGGCCGGGCTACATGGCCTTCATGCCGTTGGCCGTaGCACCCTCGGGCAGTGTGTCACCCGCGGCTGCGG +
Preference number: 3 (lower is better)
Translates to: AGRATWPSCRWP*HPRAVCHPRLR
Trigger: CCGCAGCCGCGGGTGACACACTGCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 72 bp GACCCTGGAGCCCCGGGTTCCGCAGGCCGGGCTACATaGCCTTCATGCCGTTGGCCGTGGCACCCTCGGGCA +
Preference number: 3 (lower is better)
Translates to: DPGAPGSAGRAT*PSCRWPWHPRA
Trigger: TGCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACCCGGGGCTCCAGGGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR GCA 72 bp GCCCCGGGTTCCGCAGGCCGGGCTACATGGCCTTCATaGCGTTGGCCGTGGCACCCTCGGGCAGTGTGTCAC +
Preference number: 3 (lower is better)
Translates to: APGSAGRATWPS*RWPWHPRAVCH
Trigger: GTGACACACTGCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACCCGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 72 bp GGTTCCGCAGGCCGGGCTACATGGCCTTCATGCCGTTaGCCGTGGCACCCTCGGGCAGTGTGTCACCCGCGG +
Preference number: 3 (lower is better)
Translates to: GSAGRATWPSCR*PWHPRAVCHPR
Trigger: CCGCGGGTGACACACTGCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR TCA 72 bp GCCCTGGGAGGAGAGCTGTGGGACCGCCTCGCCGGCTaGGAGCCATTACCTGCCGACCGTCGGCAAGTCAGC +
Preference number: 3 (lower is better)
Translates to: ALGGELWDRLAG*EPLPADRRQVS
Trigger: GCTGACTTGCCGACGGTCGGCAGGTAATGGCTCTCAGCCGGCGAGGCGGTCCCACAGCTCTCCTCCCAGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp TGTGTCCTGCCCGGGGCCGGGCCTTCAGGAAGCATGTaGAGTCGCACCAGCCCAGGGCGCTGTGCAGAGTGT +
Preference number: 3 (lower is better)
Translates to: CVLPGAGPSGSM*SRTSPGRCAEC
Trigger: ACACTCTGCACAGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCAGGACACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380298.2
3UTR GCA 72 bp GCTGTGGGACCGCCTCGCCGGCTGAGAGCCATTACCTaGCGACCGTCGGCAAGTCAGCCTCACACCCACTGG +
Preference number: 3 (lower is better)
Translates to: AVGPPRRLRAIT*RPSASQPHTHW
Trigger: CCAGTGGGTGTGAGGCTGACTTGCCGACGGTCGGCAGGTAATGGCTCTCAGCCGGCGAGGCGGTCCCACAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp TGCTGCCTGGACAGGACCCCAGGGCCAGGTTCTCACTaGCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCC +
Preference number: 3 (lower is better)
Translates to: CCLDRTPGPGSH*LLGASGLGPTA
Trigger: GGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCCCTGGGGTCCTGTCCAGGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485307.5
3UTR GCA 72 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTaGCCAAGCTGCCCCAGACCCTGGAGCCCCGGGTTC +
Preference number: 3 (lower is better)
Translates to: PGCVFGPWSVNL*PSCPRPWSPGF
Trigger: GAACCCGGGGCTCCAGGGTCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR GCA 72 bp GGCGGGCCCAGATGCGTATCAGGCTTGGGTGGGTCCTaGCACCTTGCTCACTTGGTACCGGATTTCCCGGGG +
Preference number: 3 (lower is better)
Translates to: GGPRCVSGLGGS*HLAHLVPDFPG
Trigger: CCCCGGGAAATCCGGTACCAAGTGAGCAAGGTGGCAGGACCCACCCAAGCCTGATACGCATCTGGGCCCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp GGCAGCTTTCCCACCCCTGGCTGCGTGTTCGGTCCCTaGTCTGTAAACCTGTGCCCAAGCTGCCCCAGACCC +
Preference number: 3 (lower is better)
Translates to: GSFPTPGCVFGP*SVNLCPSCPRP
Trigger: GGGTCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTGGGAAAGCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR CCA 72 bp TCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTaGCATCTTCCCAGAGCAACTGCGTCTCGCTGCCCA +
Preference number: 3 (lower is better)
Translates to: SPQRDRPWPWSL*HLPRATASRCP
Trigger: TGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp GGAGCGGCACCTTCACCTCGTGGCCCATCATGCTCCTaGCAAAGCAGTGGTGGATCCCGTACCCCGTCAGCG +
Preference number: 3 (lower is better)
Translates to: GAAPSPRGPSCS*QSSGGSRTPSA
Trigger: CGCTGACGGGGTACGGGATCCACCACTGCTTTGCCAGGAGCATGATGGGCCACGAGGTGAAGGTGCCGCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 72 bp CGAGTAGTCCTTGAGCTCGGCGTTGGTGAGCAGCAGTaGCTGCTCCCCCTTCTTGTGCGGCAGCAGCGGCTG +
Preference number: 3 (lower is better)
Translates to: RVVLELGVGEQQ*LLPLLVRQQRL
Trigger: CAGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCCACTGCTGCTCACCAACGCCGAGCTCAAGGACTACTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR CAA 90 bp GTGGCCCACAGGCTGAAGGTTGCCCACCCCTCGCCTAGAAGAGATAGGGGGACTTGGGAAGTGTGGGGATaGTGTGTCCTGCCCGGGGCC +
Preference number: 3 (lower is better)
Translates to: VAHRLKVAHPSPRRDRGTWEVWG*CVLPGA
Trigger: GGCCCCGGGCAGGACACACAATCCCCACACTTCCCA...AGTCCCCCTATCTCTTCTAGGCGAGGGGTGGGCAACCTTCAGCCTGTGGGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000380298.2
3UTR TCA 72 bp CTCCCCCGCACATGCGATACCTCGGGCCGGGCGGTGTaGCCTCACAGGCCCACTTATGGCACTTGCAGTTTG +
Preference number: 3 (lower is better)
Translates to: LPRTCDTSGRAV*PHRPTYGTCSL
Trigger: CAAACTGCAAGTGCCATAAGTGGGCCTGTGAGGTCACACCGCCCGGCCCGAGGTATCGCATGTGCGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp CTGAGGGTGATGGGTGCAGACGTACACCTGTCCAGGTaGAGGCTCAGGGGCCTCGCTGGATCCTTCCCACCT +
Preference number: 3 (lower is better)
Translates to: LRVMGADVHLSR*RLRGLAGSFPP
Trigger: AGGTGGGAAGGATCCAGCGAGGCCCCTGAGCCTGCACCTGGACAGGTGTACGTCTGCACCCATCACCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp TCTCCAGGAGCGGCACCTTCACCTCGTGGCCCATCATaGTCCTGGCAAAGCAGTGGTGGATCCCGTACCCCG +
Preference number: 3 (lower is better)
Translates to: SPGAAPSPRGPS*SWQSSGGSRTP
Trigger: CGGGGTACGGGATCCACCACTGCTTTGCCAGGAGCATGATGGGCCACGAGGTGAAGGTGCCGCTCCTGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 72 bp AGGAGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATaGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACT +
Preference number: 3 (lower is better)
Translates to: RSRVPSPQRDRP*PWSLWHLPRAT
Trigger: AGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp GAGGCAGGGAGAGGCTGGCCAGACAGCCTCCCTTCCTaGGTATCTCAAGATCCCAGGTGTCGGCGTGGTCCA +
Preference number: 3 (lower is better)
Translates to: EAGRGWPDSLPS*VSQDPRCRRGP
Trigger: TGGACCACGCCGACACCTGGGATCTTGAGATACCCAGGAAGGGAGGCTGTCTGGCCAGCCTCTCCCTGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp AGGTGGTGCCTTCTAGACGAGAGGACAGCTGTAGTGTaGACCTCCCCCGCACATGCGATACCTCGGGCCGGG +
Preference number: 3 (lower is better)
Translates to: RWCLLDERTAVV*TSPAHAIPRAG
Trigger: CCCGGCCCGAGGTATCGCATGTGCGGGGGAGGTCCACACTACAGCTGTCCTCTCGTCTAGAAGGCACCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp GCAGTCCCGGAAACGCTCCACGGTCCTCTCCTGCCTCTGCACGCAGGCAGGCAGATTTCCCCACACCAGTaGAGAGGCTCAGCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: AVPETLHGPLLPLHAGRQISPHQ*RGSAWL
Trigger: CAGCCAAGCTGAGCCTCTCAACTGGTGTGGGGAAAT...CTGCCTGCCTGCGTGCAGAGGCAGGAGAGGACCGTGGAGCGTTTCCGGGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR TCA 72 bp GGTGCAGGAAGTAGCCTTTCTGGTTGTGCAGCTCGATaGTGGGTGCCGTCAGCATGCCGAAGCCCGCGCTGG +
Preference number: 3 (lower is better)
Translates to: GAGSSLSGCAAR*WVPSACRSPRW
Trigger: CCAGCGCGGGCTTCGGCATGCTGACGGCACCCATCATCGAGCTGCACAACCAGAAAGGCTACTTCCTGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR GCA 72 bp GCTGCAACTAGTGGGAAGTGTGGGGATTGTGTGTCCTaGCCGGGGCCGGGCCTTCAGGAAGCATGTGCAGTC +
Preference number: 3 (lower is better)
Translates to: AATSGKCGDCVS*PGPGLQEACAV
Trigger: GACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCAGGACACACAATCCCCACACTTCCCACTAGTTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380298.2
3UTR GCA 72 bp CAGATGCGTATCAGGCTTGGGTGGGTCCTGCCACCTTaGTCACTTGGTACCGGATTTCCCGGGGCTGTGCCC +
Preference number: 3 (lower is better)
Translates to: QMRIRLGWVLPP*SLGTGFPGAVP
Trigger: GGGCACAGCCCCGGGAAATCCGGTACCAAGTGAGCAAGGTGGCAGGACCCACCCAAGCCTGATACGCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp TCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAATTTCCCCACACCAGTaGAGAGGCTCAGCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: SHLPRGTGHGPGHCGIFPISPHQ*RGSAWL
Trigger: CAGCCAAGCTGAGCCTCTCAACTGGTGTGGGGAAAT...TGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp TATCAGGCTTGGGTGGGTCCTGCCACCTTGCTCACTTaGTACCGGATTTCCCGGGGCTGTGCCCACAGGGAA +
Preference number: 3 (lower is better)
Translates to: YQAWVGPATLLT*YRISRGCAHRE
Trigger: TTCCCTGTGGGCACAGCCCCGGGAAATCCGGTACCAAGTGAGCAAGGTGGCAGGACCCACCCAAGCCTGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp ACCTCGTGGCCCATCATGCTCCTGGCAAAGCAGTGGTaGATCCCGTACCCCGTCAGCGAGTTCACACACAGG +
Preference number: 3 (lower is better)
Translates to: TSWPIMLLAKQW*IPYPVSEFTHR
Trigger: CCTGTGTGTGAACTCGCTGACGGGGTACGGGATCCACCACTGCTTTGCCAGGAGCATGATGGGCCACGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR TCA 72 bp CCCTTACTGATGTGTGGACCGCATGTGGAGGAGACATaGGTGGCGACAGCAAGCAGCAGGCCGGGTGGAAAG +
Preference number: 3 (lower is better)
Translates to: PLLMCGPHVEET*VATASSRPGGK
Trigger: CTTTCCACCCGGCCTGCTGCTTGCTGTCGCCACTCATGTCTCCTCCACATGCGGTCCACACATCAGTAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp CAGGGGCCTCGCTGGATCCTTCCCACCTTCCCCAACTaGCTACTGGCCTGGCTACTGGATAGGTCCTATTCT +
Preference number: 3 (lower is better)
Translates to: QGPRWILPTFPN*LLAWLLDRSYS
Trigger: AGAATAGGACCTATCCAGTAGCCAGGCCAGTAGGCAGTTGGGGAAGGTGGGAAGGATCCAGCGAGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp GTGAAGTGGAGGATCAGCCTCTTTGCAGACTCAAACTaGTGGGTGGCCATTAGCCACCGGAGGGACTCGGGG +
Preference number: 3 (lower is better)
Translates to: VKWRISLFADSN*WVAISHRRDSG
Trigger: CCCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTCCACTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 72 bp ATCTCAAGATCCCAGGTGTCGGCGTGGTCCAGCCACTaGAAACACGTGGCCAAGAGTCTGCTTGCCCCTTGC +
Preference number: 3 (lower is better)
Translates to: ISRSQVSAWSSH*KHVAKSLLAPC
Trigger: GCAAGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGCTGGACCACGCCGACACCTGGGATCTTGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp CCCTTCCTGGGTATCTCAAGATCCCAGGTGTCGGCGTaGTCCAGCCACTGGAAACACGTGGCCAAGAGTCTG +
Preference number: 3 (lower is better)
Translates to: PFLGISRSQVSA*SSHWKHVAKSL
Trigger: CAGACTCTTGGCCACGTGTTTCCAGTGGCTGGACCACGCCGACACCTGGGATCTTGAGATACCCAGGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp TTCACCTCGTGGCCCATCATGCTCCTGGCAAAGCAGTaGTGGATCCCGTACCCCGTCAGCGAGTTCACACAC +
Preference number: 3 (lower is better)
Translates to: FTSWPIMLLAKQ*WIPYPVSEFTH
Trigger: GTGTGTGAACTCGCTGACGGGGTACGGGATCCACCACTGCTTTGCCAGGAGCATGATGGGCCACGAGGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR CAA 90 bp CCGTTAGAAATGTTCTCAGGCAGGTTCTGGTCCCTGCTCTCGGGCAGCAGGAGGTCCGACCCGCGCTCCTaGGACTTTTGGAAAGACAGG +
Preference number: 3 (lower is better)
Translates to: PLEMFSGRFWSLLSGSRRSDPRS*DFWKDR
Trigger: CCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGA...CCTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAACATTTCTAACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR CAA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGTCTGGTATCACACCCTaGATGTCGCCCTCAGGGTTC +
Preference number: 3 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGSGITP*MSPSGF
Trigger: GAACCCTGAGGGCGACATCAAGGGTGTGATACCAGA...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR TCA 72 bp CAAAAACAGACAGTGGGCCTGATGTGGCCCACAGGCTaGAGGTTGCCCACCCCTCGCCTAGAAGAGATAGGG +
Preference number: 3 (lower is better)
Translates to: QKQTVGLMWPTG*RLPTPRLEEIG
Trigger: CCCTATCTCTTCTAGGCGAGGGGTGGGCAACCTTCAGCCTGTGGGCCACATCAGGCCCACTGTCTGTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380298.2
3UTR GCA 72 bp ATGGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACTaGGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTG +
Preference number: 3 (lower is better)
Translates to: MALVTVASSQSN*VSLPREVIPFV
Trigger: CACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp GACCGTCGGCAAGTCAGCCTCACACCCACTGGACTCTaGTCCCAAGAGCCCAGGCTGTTTTCCTCAAAGCTA +
Preference number: 3 (lower is better)
Translates to: DRRQVSLTPTGL*SQEPRLFSSKL
Trigger: TAGCTTTGAGGAAAACAGCCTGGGCTCTTGGGAGCAGAGTCCAGTGGGTGTGAGGCTGACTTGCCGACGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp TGGCTGTACTTTCCAATCAGGTTGAGGAGGCCGAGCTaGAGGAGTGAGGCCAGGGCGGTGAGGATCATGAAG +
Preference number: 3 (lower is better)
Translates to: WLYFPIRLRRPS*RSEARAVRIMK
Trigger: CTTCATGATCCTCACCGCCCTGGCCTCACTCCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGTACAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 72 bp CTCGGGCCGGGCGGTGTGACCTCACAGGCCCACTTATaGCACTTGCAGTTTGGGATTGCTCATTTGGCTCTA +
Preference number: 3 (lower is better)
Translates to: LGPGGVTSQAHL*HLQFGIAHLAL
Trigger: TAGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATAAGTGGGCCTGTGAGGTCACACCGCCCGGCCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp GGAGGATCAGCCTCTTTGCAGACTCAAACTGCTGGGTaGCCATTAGCCACCGGAGGGACTCGGGGAATATCC +
Preference number: 3 (lower is better)
Translates to: GGSASLQTQTAG*PLATGGTRGIS
Trigger: GGATATTCCCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 72 bp ACATGGCCAGGCAGGACACCAGCGCGATGCTGGCCGTaGTATAGTAGTCAGCATAGAAGTTCTCCAGGAGCG +
Preference number: 3 (lower is better)
Translates to: TWPGRTPARCWP*YSSQHRSSPGA
Trigger: CGCTCCTGGAGAACTTCTATGCTGACTACTATACCACGGCCAGCATCGCGCTGGTGTCCTGCCTGGCCATGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 72 bp CCACGCACATGGCCAGGCAGGACACCAGCGCGATGCTaGCCGTGGTATAGTAGTCAGCATAGAAGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: PRTWPGRTPARC*PWYSSQHRSSP
Trigger: TGGAGAACTTCTATGCTGACTACTATACCACGGCCAGCATCGCGCTGGTGTCCTGCCTGGCCATGTGCGTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR CAA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGTCCGACCCGCGCTCCTaGGACTTTTGGAAAGACAGG +
Preference number: 3 (lower is better)
Translates to: PALLGLLERQDFPTPVERSDPRS*DFWKDR
Trigger: CCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGA...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR-3UTR CAA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGTTATTTCCAAAGAGTTaGTCTCCTCCGACCCGCGCT +
Preference number: 3 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGLFPKS*SPPTRA
Trigger: AGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAA...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR GCA 72 bp AGAAGCCAGGCTGTCCAGAAAAGCTGGTGCCCAAGTTaGTACAAAGTGGTGCCTGCCCTTGCCAAGGAGGCT +
Preference number: 3 (lower is better)
Translates to: RSQAVQKSWCPS*YKVVPALAKEA
Trigger: AGCCTCCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp GTCCAGCCACTGGAAACACGTGGCCAAGAGTCTGCTTaGCCCTTGCTGTGTCTTTACACATCTCCAGGCCCT +
Preference number: 3 (lower is better)
Translates to: VQPLETRGQESA*PLLCLYTSPGP
Trigger: AGGGCCTGGAGATGTGTAAAGACACAGCAAGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp CACCTTGCTCACTTGGTACCGGATTTCCCGGGGCTGTaGCCACAGGGAAGTGTTGCTGCTCTGGCAACATTT +
Preference number: 3 (lower is better)
Translates to: HLAHLVPDFPGL*PQGSVAALATF
Trigger: AAATGTTGCCAGAGCAGCAACACTTCCCTGTGGGCACAGCCCCGGGAAATCCGGTACCAAGTGAGCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp AAGTGGAGGATCAGCCTCTTTGCAGACTCAAACTGCTaGGTGGCCATTAGCCACCGGAGGGACTCGGGGAAT +
Preference number: 3 (lower is better)
Translates to: KWRISLFADSNC*VAISHRRDSGN
Trigger: ATTCCCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR GCA 72 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTaGTGGAGCCAATCTGGGAGAGGAGGAATAAAAACG +
Preference number: 3 (lower is better)
Translates to: PAQELPVHEGLF*WSQSGRGGIKT
Trigger: CGTTTTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR GCA 72 bp GAAAAGCTGGTGCCCAAGTTGCTACAAAGTGGTGCCTaGCCTTGCCAAGGAGGCTGTCTCTTAGTCGCCTTG +
Preference number: 3 (lower is better)
Translates to: EKLVPKLLQSGA*PCQGGCLLVAL
Trigger: CAAGGCGACTAAGAGACAGCCTCCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp TCCAGAAAAGCTGGTGCCCAAGTTGCTACAAAGTGGTaGCTGCCCTTGCCAAGGAGGCTGTCTCTTAGTCGC +
Preference number: 3 (lower is better)
Translates to: SRKAGAQVATKW*LPLPRRLSLSR
Trigger: GCGACTAAGAGACAGCCTCCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp ATGCCAGTAAGAAGCCAGGCTGTCCAGAAAAGCTGGTaGCCAAGTTGCTACAAAGTGGTGCCTGCCCTTGCC +
Preference number: 3 (lower is better)
Translates to: MPVRSQAVQKSW*PSCYKVVPALA
Trigger: GGCAAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGCTTCTTACTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp TCGGTTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGATTTCCCCACACCAGTaGAGAGGCTCAGCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: SVGSHFIVSPRPETTISLISPHQ*RGSAWL
Trigger: CAGCCAAGCTGAGCCTCTCAACTGGTGTGGGGAAAT...CAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp GAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGAATTATTTCCAAAGAGTTaGTCTCCTCCGACCCGCGCT +
Preference number: 3 (lower is better)
Translates to: EAGGHLDSPMRNLRSLPELFPKS*SPPTRA
Trigger: AGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAA...TTCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR TCA 72 bp CCCTTGCTGTGTCTTTACACATCTCCAGGCCCTTACTaGTGTGTGGACCGCATGTGGAGGAGACATGAGTGG +
Preference number: 3 (lower is better)
Translates to: PLLCLYTSPGPY*CVDRMWRRHEW
Trigger: CCACTCATGTCTCCTCCACATGCGGTCCACACATCAGTAAGGGCCTGGAGATGTGTAAAGACACAGCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR TCA 72 bp TGCCCACGATGGAAAACGCGATGGAAAATTTGTCCTTaGCGCTGTCACTCATCCCTGAGTCTGGGTGCTGGC +
Preference number: 3 (lower is better)
Translates to: CPRWKTRWKICP*RCHSSLSLGAG
Trigger: GCCAGCACCCAGACTCAGGGATGAGTGACAGCGTCAAGGACAAATTTTCCATCGCGTTTTCCATCGTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR CCA 72 bp GCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTaGAGCCAATCTGGGAGAGGAGGAATAAAAACGAGC +
Preference number: 3 (lower is better)
Translates to: AQELPVHEGLFC*SQSGRGGIKTS
Trigger: GCTCGTTTTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR CCA 72 bp TCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTaGAAGGACACAGCCCATGGCAAAGACATGCTTCGA +
Preference number: 3 (lower is better)
Translates to: SLSHPGPRPQFP*KDTAHGKDMLR
Trigger: TCGAAGCATGTCTTTGCCATGGGCTGTGTCCTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp TGCTATGAACGAGCACCGTCAGAGAATTCCCACCCACACGTACAGAAACACAGTTCCGACCCGCGCTCCTaGGACTTTTGGAAAGACAGG +
Preference number: 3 (lower is better)
Translates to: CYERAPSENSHPHVQKHSSDPRS*DFWKDR
Trigger: CCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGA...ACTGTGTTTCTGTACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp TTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGAAGGAGGCAGGGGCAGCGTaGAGCTTTGGTGAGTTATTG +
Preference number: 3 (lower is better)
Translates to: LEVTSLSHPGPRPQFPWKEAGAA*SFGELL
Trigger: CAATAACTCACCAAAGCTCAACGCTGCCCCTGCCTC...CTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR TCA 72 bp CCGAAAATGCCAAGAGGAAACCTCCACTTTCTGGGGTaGAACGAGGAACACGAAGAGACCCATGGAGGTCGA +
Preference number: 3 (lower is better)
Translates to: PKMPRGNLHFLG*NEEHEETHGGR
Trigger: TCGACCTCCATGGGTCTCTTCGTGTTCCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR TCA 72 bp GGGAAAGCTCTTTCTCCAGCTCTGGTATCACACCCTTaGTGTCGCCCTCAGGGTTCATGCGATTCTTCTGTG +
Preference number: 3 (lower is better)
Translates to: GKALSPALVSHP*CRPQGSCDSSV
Trigger: CACAGAAGAATCGCATGAACCCTGAGGGCGACATCAAGGGTGTGATACCAGAGCTGGAGAAAGAGCTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR GCA 72 bp CACTGGAAACACGTGGCCAAGAGTCTGCTTGCCCCTTaGTGTGTCTTTACACATCTCCAGGCCCTTACTGAT +
Preference number: 3 (lower is better)
Translates to: HWKHVAKSLLAP*CVFTHLQALTD
Trigger: ATCAGTAAGGGCCTGGAGATGTGTAAAGACACAGCAAGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp CTCACAGGCCCACTTATGGCACTTGCAGTTTGGGATTaGTCATTTGGCTCTAGGAAGCGGTGGTGTCTGAGT +
Preference number: 3 (lower is better)
Translates to: LTGPLMALAVWD*SFGSRKRWCLS
Trigger: ACTCAGACACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATAAGTGGGCCTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp CTTTTCCAAAACACACGGGACATGAAAGCGAGGTGGTaGCTTCTAGACGAGAGGACAGCTGTAGTGTGGACC +
Preference number: 3 (lower is better)
Translates to: LFQNTRDMKARW*LLDERTAVVWT
Trigger: GGTCCACACTACAGCTGTCCTCTCGTCTAGAAGGCACCACCTCGCTTTCATGTCCCGTGTGTTTTGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp ACAATGCCAGTAAGAAGCCAGGCTGTCCAGAAAAGCTaGTGCCCAAGTTGCTACAAAGTGGTGCCTGCCCTT +
Preference number: 3 (lower is better)
Translates to: TMPVRSQAVQKS*CPSCYKVVPAL
Trigger: AAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGCTTCTTACTGGCATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp TGGATCCTTCCCACCTTCCCCAACTGCCTACTGGCCTaGCTACTGGATAGGTCCTATTCTGTACATAATGGG +
Preference number: 3 (lower is better)
Translates to: WILPTFPNCLLA*LLDRSYSVHNG
Trigger: CCCATTATGTACAGAATAGGACCTATCCAGTAGCCAGGCCAGTAGGCAGTTGGGGAAGGTGGGAAGGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp TGTGACCTCACAGGCCCACTTATGGCACTTGCAGTTTaGGATTGCTCATTTGGCTCTAGGAAGCGGTGGTGT +
Preference number: 3 (lower is better)
Translates to: CDLTGPLMALAV*DCSFGSRKRWC
Trigger: ACACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATAAGTGGGCCTGTGAGGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTATTTCCCCACACCAGTaGAGAGGCTCAGCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTISPHQ*RGSAWL
Trigger: CAGCCAAGCTGAGCCTCTCAACTGGTGTGGGGAAAT...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR-3UTR CAA 90 bp TCGGTTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGTGTCTCTTAGTCGCCTaGGGTGTCCTACAAGTTTCC +
Preference number: 3 (lower is better)
Translates to: SVGSHFIVSPRPETTISLCLLVA*GVLQVS
Trigger: GGAAACTTGTAGGACACCCAAGGCGACTAAGAGACA...CAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAACCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAAGTGGGTCCTGCCACCTaGCTCACTTGGTACCGGATT +
Preference number: 3 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCEVGPAT*LTWYRI
Trigger: AATCCGGTACCAAGTGAGCAAGGTGGCAGGACCCAC...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTGGAGGATCAGCCTCTTaGCAGACTCAAACTGCTGGG +
Preference number: 3 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFGGSAS*QTQTAG
Trigger: CCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTCC...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR-3UTR CAA 90 bp GACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGAGCACCGTCAGAGAATGAGGCAGGGGCAGCGTaGAGCTTTGGTGAGTTATTG +
Preference number: 3 (lower is better)
Translates to: DSSELSVSLCYERAPSENEAGAA*SFGELL
Trigger: CAATAACTCACCAAAGCTCAACGCTGCCCCTGCCTC...ATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp GACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGAGCACCGTCAGAGAATAAGCTGGTGCCCAAGTaGCTACAAAGTGGTGCCTGC +
Preference number: 3 (lower is better)
Translates to: DSSELSVSLCYERAPSENKLVPK*LQSGAC
Trigger: GCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTT...ATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp TACATACAAATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGGTGGGAGGGTCAAGTaGAAACAGTGGGTGCCTGCG +
Preference number: 3 (lower is better)
Translates to: YIQIFPKGTTDATPCRHAGGRVK*KQWVPA
Trigger: CGCAGGCACCCACTGTTTCAACTTGACCCTCCCACC...TGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATTTGTATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR TCA 72 bp GAACGACAGTTCAGAACTCAGCGTAAGCTTGTGCTATaGACGAGCACCGTCAGAGAATTCCCACCCACACGT +
Preference number: 3 (lower is better)
Translates to: ERQFRTQRKLVL*TSTVREFPPTR
Trigger: ACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTCGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp AGAGATCATGACCAGAAGAGTGTGAGTGCTGTCCCTTaGCACCAACTTCCTAGAGATTTCGGGCAGCACTCT +
Preference number: 3 (lower is better)
Translates to: RDHDQKSVSAVP*HQLPRDFGQHS
Trigger: AGAGTGCTGCCCGAAATCTCTAGGAAGTTGGTGGCAAGGGACAGCACTCACACTCTTCTGGTCATGATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp GCTGTGAACGACAGTTCAGAACTCAGCGTAAGCTTGTaGTATGAACGAGCACCGTCAGAGAATTCCCACCCA +
Preference number: 3 (lower is better)
Translates to: AVNDSSELSVSL*YERAPSENSHP
Trigger: TGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTCGTTCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTaGACTTTTGGAAAGACAGGATTTCCCCACACCAGT +
Preference number: 3 (lower is better)
Translates to: FPKSLSPPTRAP*TFGKTGFPHTS
Trigger: ACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR CCA 72 bp TTCCTCCGAAAATGCCAAGAGGAAACCTCCACTTTCTaGGGTGAAACGAGGAACACGAAGAGACCCATGGAG +
Preference number: 3 (lower is better)
Translates to: FLRKCQEETSTF*GETRNTKRPME
Trigger: CTCCATGGGTCTCTTCGTGTTCCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp TTCCCACCTTCCCCAACTGCCTACTGGCCTGGCTACTaGATAGGTCCTATTCTGTACATAATGGGGGTTTGT +
Preference number: 3 (lower is better)
Translates to: FPPSPTAYWPGY*IGPILYIMGVC
Trigger: ACAAACCCCCATTATGTACAGAATAGGACCTATCCAGTAGCCAGGCCAGTAGGCAGTTGGGGAAGGTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACTTATTTCCAAAGAGTTaGTCTCCTCCGACCCGCGCT +
Preference number: 3 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDLFPKS*SPPTRA
Trigger: AGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAA...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR-3UTR CAA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACATTATTTCCAAAGAGTTaGTCTCCTCCGACCCGCGCT +
Preference number: 3 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTLFPKS*SPPTRA
Trigger: AGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAA...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR-3UTR CAA 90 bp TTATGGCACTTGCAGTTTGGGATTGCTCATTTGGCTCTAGGAAGCGGTGGTGTCGAGGCTGGAGGTCATTaGGACTCACCTATGAGGAAT +
Preference number: 3 (lower is better)
Translates to: LWHLQFGIAHLALGSGGVEAGGH*DSPMRN
Trigger: ATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC...GACACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR TCA 72 bp CGAAGAGACCCATGGAGGTCGAGGCAGGGGCAGCGTTaGGCTTTGGTGAGTTATTGCTTTCTTTCAATTTGT +
Preference number: 3 (lower is better)
Translates to: RRDPWRSRQGQR*ALVSYCFLSIC
Trigger: ACAAATTGAAAGAAAGCAATAACTCACCAAAGCTCAACGCTGCCCCTGCCTCGACCTCCATGGGTCTCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR GCA 72 bp AAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATaGAGTCCCGGAAACGCTCCACGGTCCTCTCCTGCC +
Preference number: 3 (lower is better)
Translates to: KAKFMYISLRLK*SPGNAPRSSPA
Trigger: GGCAGGAGAGGACCGTGGAGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp GCAGTTTGGGATTGCTCATTTGGCTCTAGGAAGCGGTaGTGTCTGAGTGTGATACTTCCCTTACGAGGTTTG +
Preference number: 3 (lower is better)
Translates to: AVWDCSFGSRKR*CLSVILPLRGL
Trigger: CAAACCTCGTAAGGGAAGTATCACACTCAGACACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp AAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACGCTTCCGACCCGCGCTCCTaGGACTTTTGGAAAGACAGG +
Preference number: 3 (lower is better)
Translates to: KAKFMYISLRLKCSPGNASDPRS*DFWKDR
Trigger: CCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGA...AGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp TCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGGAAGAGGCTGGAGGTCATTaGGACTCACCTATGAGGAAT +
Preference number: 3 (lower is better)
Translates to: SLSRLGCPTSFLRKCQEEEAGGH*DSPMRN
Trigger: ATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC...TTCCTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAATTTGGGATTGCTCATTaGGCTCTAGGAAGCGGTGGT +
Preference number: 3 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCEFGIAH*ALGSGG
Trigger: ACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAA...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR TCA 72 bp TTGAGGTGGAGATCAGAGATCATGACCAGAAGAGTGTaGGTGCTGTCCCTTGCCACCAACTTCCTAGAGATT +
Preference number: 3 (lower is better)
Translates to: LRWRSEIMTRRV*VLSLATNFLEI
Trigger: AATCTCTAGGAAGTTGGTGGCAAGGGACAGCACTCACACTCTTCTGGTCATGATCTCTGATCTCCACCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp GGAAAGATGAAGCTGGTTTTAACGGCGTCTGTGAGCTaGTTTCCCTGCACACGAACAGAAGCTCTTACCTTA +
Preference number: 3 (lower is better)
Translates to: GKMKLVLTASVS*FPCTRTEALTL
Trigger: TAAGGTAAGAGCTTCTGTTCGTGTGCAGGGAAAGCAGCTCACAGACGCCGTTAAAACCAGCTTCATCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
3UTR CCA 72 bp GCCAGACTGGCCAGTGCATTTGCAGATTTTTGGAGCTaGGTGATGGGCTCATTCCACTCTTCTATTTTTGTG +
Preference number: 3 (lower is better)
Translates to: ARLASAFADFWS*VMGSFHSSIFV
Trigger: CACAAAAATAGAAGAGTGGAATGAGCCCATCACCCAGCTCCAAAAATCTGCAAATGCACTGGCCAGTCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380298.2
3UTR-3UTR CAA 90 bp CACGCAGCTGTGAACGACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGATTCTTTCAATTTGTCTaGATGCCTTCGAGAGGCTGG +
Preference number: 3 (lower is better)
Translates to: HAAVNDSSELSVSLCYERFFQFV*MPSRGW
Trigger: CCAGCCTCTCGAAGGCATCAAGACAAATTGAAAGAA...TCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTCGTTCACAGCTGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp AGTTTCCTCCGAAAATGCCAAGAGGAAACCTCCACTTTCTGGGGTGAAACGAGGTTCTTTCAATTTGTCTaGATGCCTTCGAGAGGCTGG +
Preference number: 3 (lower is better)
Translates to: SFLRKCQEETSTFWGETRFFQFV*MPSRGW
Trigger: CCAGCCTCTCGAAGGCATCAAGACAAATTGAAAGAA...CCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp CTCACAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGGCGCTCCTTGGACTTTaGGAAAGACAGGATTTCCCC +
Preference number: 3 (lower is better)
Translates to: LTKLWRYDCCSIKISGEMALLGL*ERQDFP
Trigger: GGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGC...CATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR-3UTR CAA 90 bp CCCACACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGATTATTTCCAAAGAGTTaGTCTCCTCCGACCCGCGCT +
Preference number: 3 (lower is better)
Translates to: PTRTETQFLYYNLKDREGLFPKS*SPPTRA
Trigger: AGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAA...TCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGTGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp CACGCAGCTGTGAACGACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGAGTACATAATGGGGGTTaGTTGACAGGTGGCTTTATA +
Preference number: 3 (lower is better)
Translates to: HAAVNDSSELSVSLCYERVHNGG*LTGGFI
Trigger: TATAAAGCCACCTGTCAACAAACCCCCATTATGTAC...TCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTCGTTCACAGCTGCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR GCA 72 bp GGAAAGATGAAGCTGGTTTTAACGGCGTCTGTGAGCTaGTTTCCCTGCACACGAACAGAAGCTCTTACATTT +
Preference number: 3 (lower is better)
Translates to: GKMKLVLTASVS*FPCTRTEALTF
Trigger: AAATGTAAGAGCTTCTGTTCGTGTGCAGGGAAAGCAGCTCACAGACGCCGTTAAAACCAGCTTCATCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
3UTR TCA 72 bp TTAATTTTACTGATGGCCCCCGTCTCTCAGGTGGTCTaGGAGTGGCACTTGGTAAACAGTGTGTGTTTAATC +
Preference number: 3 (lower is better)
Translates to: LILLMAPVSQVV*EWHLVNSVCLI
Trigger: GATTAAACACACACTGTTTACCAAGTGCCACTCTCAGACCACCTGAGAGACGGGGGCCATCAGTAAAATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR TCA 72 bp ACACAGCTTACAGAGGCGTTCAAAGTAGTGACGCAGTaGGGTCTGAATGAACACGGAGGATTTTATTACTCA +
Preference number: 3 (lower is better)
Translates to: TQLTEAFKVVTQ*GLNEHGGFYYS
Trigger: TGAGTAATAAAATCCTCCGTGTTCATTCAGACCTCACTGCGTCACTACTTTGAACGCCTCTGTAAGCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp ACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGTGTAGGAATTTCACAAGTTaGGCACGCAAAGGCTGCACA +
Preference number: 3 (lower is better)
Translates to: TYRNTVFILQPQGQGGKCRNFTS*ARKGCT
Trigger: TGTGCAGCCTTTGCGTGCCAAACTTGTGAAATTCCT...ACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR TCA 72 bp AGCTTTGGTGAGTTATTGCTTTCTTTCAATTTGTCTTaGTGCCTTCGAGAGGCTGGAGGTCATTTGGACTCA +
Preference number: 3 (lower is better)
Translates to: SFGELLLSFNLS*CLREAGGHLDS
Trigger: TGAGTCCAAATGACCTCCAGCCTCTCGAAGGCATCAAGACAAATTGAAAGAAAGCAATAACTCACCAAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
3UTR TCA 72 bp AGAGGCGTTCAAAGTAGTGACGCAGTGAGGTCTGAATaGACACGGAGGATTTTATTACTCACCATTAATGGT +
Preference number: 3 (lower is better)
Translates to: RGVQSSDAVRSE*TRRILLLTING
Trigger: ACCATTAATGGTGAGTAATAAAATCCTCCGTGTTCATTCAGACCTCACTGCGTCACTACTTTGAACGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR-3UTR CAA 90 bp CCCACACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGACATTTCATAAAGGTGTaGCTCAACAGCTTCAGGTAT +
Preference number: 3 (lower is better)
Translates to: PTRTETQFLYYNLKDREGHFIKV*LNSFRY
Trigger: ATACCTGAAGCTGTTGAGCAACACCTTTATGAAATG...TCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGTGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TGCCCGGGGCCGGGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGGCGCTCGAGGCCGGCGCGGATaGCGTAGTCCCATGCGCGGC +
Preference number: 4 (lower is better)
Translates to: CPGPGLQEACAVAPAQGARGRRG*RSPMRG
Trigger: GCCGCGCATGGGACTACGGCATCCGCGCCGGCCTCG...AGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp GTGTGTCCTGCCCGGGGCCGGGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCGGGCCGCCTCCAGGATaGAGTGGGGGCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: VCPARGRAFRKHVQSHQPGPPPG*SGGSGW
Trigger: CCAGCCGCTGCCCCCACTGCATCCTGGAGGCGGCCC...GGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCAGGACACAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp TGCCCGGGGCCGGGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGGCGCTCCAGCTCGGTGCCTTTaGCGGCCCCGCGGCACCAGA +
Preference number: 4 (lower is better)
Translates to: CPGPGLQEACAVAPAQGAPARCL*RPRGTR
Trigger: TCTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGG...AGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380298.2
3UTR CAA 72 bp GGGTTCCGCAGGCCGGGCTACATGGCCTTCATGCCGTaGGCCGTGGCACCCTCGGGCAGTGTGTCACCCGCG +
Preference number: 4 (lower is better)
Translates to: GFRRPGYMAFMP*AVAPSGSVSPA
Trigger: CGCGGGTGACACACTGCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR TCA 90 bp GTGTGTCCTGCCCGGGGCCGGGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCCGGCTAGCCCAGGCATaGGGAACTGGCCCGCCATGG +
Preference number: 4 (lower is better)
Translates to: VCPARGRAFRKHVQSHQPRLAQA*GTGPPW
Trigger: CCATGGCGGGCCAGTTCCTCATGCCTGGGCTAGCCG...GGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCAGGACACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp GGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTCGAGGCCGGCGCGGATaGCGTAGTCCCATGCGCGGC +
Preference number: 4 (lower is better)
Translates to: GQVLTASWAPRGWVQQPPRGRRG*RSPMRG
Trigger: GCCGCGCATGGGACTACGGCATCCGCGCCGGCCTCG...AGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp TGCCCGGGGCCGGGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGGCGCTTGGCGAAGGGGGTGGTaGGGAGGCTGGTCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: CPGPGLQEACAVAPAQGAWRRGW*GGWSSC
Trigger: GCAACTGGACCAGCCTCCCCACCACCCCCTTCGCCA...AGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CCA 90 bp GCAGTGGCTGCTCCCCCTTCTTGTGCGGCAGCAGCGGCTGGCGCGTGTAGTGCTAGCTGCCCCAGACCCTaGAGCCCCGGGTTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: AVAAPPSCAAAAAGACSASCPRP*SPGFRR
Trigger: CCTGCGGAACCCGGGGCTCCAGGGTCTGGGGCAGCT...AGCACTACACGCGCCAGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCCACTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR TCA 90 bp TCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCACCCGGCCTGTGGTGGTaGCCCCTGCCAGCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: SHLPRGTGHGPGHCGIFPPGLWW*PLPARC
Trigger: GCACCGAGCTGGCAGGGGTCACCACCACAGGCCGGG...TGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CCAGGGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCCGGCTAGCCCAGGCATaGGGAACTGGCCCGCCATGG +
Preference number: 4 (lower is better)
Translates to: PGPGSHCLLGASGLGPTARLAQA*GTGPPW
Trigger: CCATGGCGGGCCAGTTCCTCATGCCTGGGCTAGCCG...GGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR TCA 90 bp GCCCCAGACCCTGGAGCCCCGGGTTCCGCAGGCCGGGCTACATGGCCTTCATGCCACAGAAGAACACGCTaGGGCTCCCCACCGCATGGG +
Preference number: 4 (lower is better)
Translates to: APDPGAPGSAGRATWPSCHRRTR*GSPPHG
Trigger: CCCATGCGGTGGGGAGCCTCAGCGTGTTCTTCTGTG...GCATGAAGGCCATGTAGCCCGGCCTGCGGAACCCGGGGCTCCAGGGTCTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR GCA 90 bp TGTGTCCTGCCCGGGGCCGGGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGGGATTGTGTGTCCTaGCCGGGGCCGGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: CVLPGAGPSGSMCSRTSPGDCVS*PGPGLQ
Trigger: CTGAAGGCCCGGCCCCGGGCAGGACACACAATCCCC...TGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCAGGACACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp GCAGTCCCGGAAACGCTCCACGGTCCTCTCCTGCCTCTGCACGCAGGCAGGCAGGGGGCTCCTGGGTGCTaGCAGGAGCCGTGTCCCATC +
Preference number: 4 (lower is better)
Translates to: AVPETLHGPLLPLHAGRQGAPGC*QEPCPI
Trigger: GATGGGACACGGCTCCTGGCAGCACCCAGGAGCCCC...CTGCCTGCCTGCGTGCAGAGGCAGGAGAGGACCGTGGAGCGTTTCCGGGACTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACTGCGTCTCGGTGCGGGCAAAGGCTaGTGCTCCCGGGGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: GTGHGPGHCGIFPEQLRLGAGKG*CSRGGR
Trigger: GCGGCCACCCCGGGAGCAGCAGCCTTTGCCCGCACC...GAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GTGTGTCCTGCCCGGGGCCGGGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCGGGTGGTGGGGAGGCTaGTCCAGTTGCCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: VCPARGRAFRKHVQSHQPGWWGG*SSCPCP
Trigger: GGGACATGGGCAACTGGACCAGCCTCCCCACCACCC...GGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCAGGACACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CCA 90 bp GCCAGGAGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGGCAGGCCGGGCTACATaGCCTTCATGCCGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: ARSRVPSPQRDRPWPWSLAGRAT*PSCRWP
Trigger: CGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGC...CAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCTCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GTGGCCCACAGGCTGAAGGTTGCCCACCCCTCGCCTAGAAGAGATAGGGGGACTCCCGGCCTGTGGTGGTaGCCCCTGCCAGCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: VAHRLKVAHPSPRRDRGTPGLWW*PLPARC
Trigger: GCACCGAGCTGGCAGGGGTCACCACCACAGGCCGGG...AGTCCCCCTATCTCTTCTAGGCGAGGGGTGGGCAACCTTCAGCCTGTGGGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp GGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTAGGGCCTGCAGCACCTaGCAATCCCGGCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: GQVLTASWAPRGWVQQPPRACST*QSRHRA
Trigger: CGCCCTGTGCCGGGATTGGCAGGTGCTGCAGGCCCT...AGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR GCA 90 bp GGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTGCAGCAGCCCTCCCCTaGGCCCGAGGAATCGGACCA +
Preference number: 4 (lower is better)
Translates to: GQVLTASWAPRGWVQQPPAAALP*ARGIGP
Trigger: TGGTCCGATTCCTCGGGCGCAGGGGAGGGCTGCTGC...AGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR GCA 90 bp AGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATTGGGTGCCGTCAGCATaGCGAAGCCCGCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SRVPSPQRDRPWPWSLWHWVPSA*RSPRWP
Trigger: TGGCCAGCGCGGGCTTCGGCATGCTGACGGCACCCA...ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGGGTGCGGGCAAAGGCTaGTGCTCCCGGGGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: APPLCYASDCKQEAGPGRGAGKG*CSRGGR
Trigger: GCGGCCACCCCGGGAGCAGCAGCCTTTGCCCGCACC...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCAGGGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCGGAACTGGCCCGCCATaGCCACGAAGCTCGCCACCA +
Preference number: 4 (lower is better)
Translates to: PGPGSHCLLGASGLGPTAGTGPP*PRSSPP
Trigger: TGGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCC...GGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp GCAGTGGCTGCTCCCCCTTCTTGTGCGGCAGCAGCGGCTGGCGCGTGTAGTGCTTGGCCTTCATGCCGTTaGCCGTGGCACCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: AVAAPPSCAAAAAGACSAWPSCR*PWHPRA
Trigger: TGCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCA...AGCACTACACGCGCCAGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCCACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR TCA 90 bp GGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACTGCGTCTCCGGCTAGCCCAGGCATaGGGAACTGGCCCGCCATGG +
Preference number: 4 (lower is better)
Translates to: GTGHGPGHCGIFPEQLRLRLAQA*GTGPPW
Trigger: CCATGGCGGGCCAGTTCCTCATGCCTGGGCTAGCCG...GAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCGGCTAGCCCAGGCATaGGGAACTGGCCCGCCATGG +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPRLAQA*GTGPPW
Trigger: CCATGGCGGGCCAGTTCCTCATGCCTGGGCTAGCCG...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp CCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTCAGCCGAGCTGCAGGAGTaGGGCCAGGGCGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PGSHCLLGASGLGPTATSAELQE*GQGGED
Trigger: ATCCTCACCGCCCTGGCCTCACTCCTGCAGCTCGGC...TGAGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR TCA 90 bp GCCCCAGACCCTGGAGCCCCGGGTTCCGCAGGCCGGGCTACATGGCCTTCATGCGCTGTCACTCATCCCTaGGTCTGGGTGCTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: APDPGAPGSAGRATWPSCAVTHP*VWVLAV
Trigger: TACAGCCAGCACCCAGACTCAGGGATGAGTGACAGC...GCATGAAGGCCATGTAGCCCGGCCTGCGGAACCCGGGGCTCCAGGGTCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR GCA 90 bp GTGGCCCACAGGCTGAAGGTTGCCCACCCCTCGCCTAGAAGAGATAGGGGGACTGAGCAGCAGCTCGGGTaGGGGCCGCCTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: VAHRLKVAHPSPRRDRGTEQQLG*GPPPGC
Trigger: GCATCCTGGAGGCGGCCCGCACCCGAGCTGCTGCTC...AGTCCCCCTATCTCTTCTAGGCGAGGGGTGGGCAACCTTCAGCCTGTGGGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp GGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGGCGCTGTGCAGAGTGTAGGAGGCTGGTCCAGTTaGCCATGTCCCCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: GLQEACAVAPAQGAVQSVGGWSS*PCPRPG
Trigger: GCCGGGGCGGGGACATGGGCAACTGGACCAGCCTCC...TACACTCTGCACAGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGCCGCGCCGCTGCTGTTaGTCCGGTTGCCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: APPLCYASDCKQEAGPGRPRRCC*SGCPQP
Trigger: AGGCTGCGGGCAACCGGAGCAACAGCAGCGGCGCGG...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GTGGCCCACAGGCTGAAGGTTGCCCACCCCTCGCCTAGAAGAGATAGGGGGACTCTCCGTCCGCGCCGCTaGTGTTGCTCCGGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: VAHRLKVAHPSPRRDRGTLRPRR*CCSGCP
Trigger: CGGGCAACCGGAGCAACAGCAGCGGCGCGGACGGAG...AGTCCCCCTATCTCTTCTAGGCGAGGGGTGGGCAACCTTCAGCCTGTGGGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp GTGTGTCCTGCCCGGGGCCGGGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCCAGCCCAGGGCGCTGTaGAGAGTGTACTCACGACCA +
Preference number: 4 (lower is better)
Translates to: VCPARGRAFRKHVQSHQPQPRAL*RVYSRP
Trigger: TGGTCGTGAGTACACTCTGCACAGCGCCCTGGGCTG...GGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCAGGACACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp GGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTTTGAGGAGGCCGAGCTaGAGGAGTGAGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GQVLTASWAPRGWVQQPPLRRPS*RSEARA
Trigger: CGCCCTGGCCTCACTCCTGCAGCTCGGCCTCCTCAA...AGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR GCA 90 bp GCCAGGAGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGCAGCTCGATGATGGGTaGCGTCAGCATGCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: ARSRVPSPQRDRPWPWSLQLDDG*RQHAEA
Trigger: GGCTTCGGCATGCTGACGGCACCCATCATCGAGCTG...CAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCTCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCATGTGTCACCCGCGGCTaGGGCATCGTGGAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: SHLPRGTGHGPGHCGIFPCVTRG*GIVEAR
Trigger: TCGGGCCTCCACGATGCCGCAGCCGCGGGTGACACA...TGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GTGAGGATCATGAAGAGCAGCAGCCCTCCCCTGCGCCCGAGGAATCGGACCACCTGTGTCACCCGCGGCTaGGGCATCGTGGAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: VRIMKSSSPPLRPRNRTTCVTRG*GIVEAR
Trigger: TCGGGCCTCCACGATGCCGCAGCCGCGGGTGACACA...GGTGGTCCGATTCCTCGGGCGCAGGGGAGGGCTGCTGCTCTTCATGATCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR GCA 90 bp CCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTCAGGGCCAGGTTCTCACTaGCTCTTGGGCGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PGSHCLLGASGLGPTATSGPGSH*LLGASG
Trigger: CCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCCC...TGAGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp CCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTCAAGGGGATGGCAGGGGTaGTGTGTCGCCTCCGTCCGC +
Preference number: 4 (lower is better)
Translates to: PGSHCLLGASGLGPTATSRGWQG*CVASVR
Trigger: GCGGACGGAGGCGACACACCACCCCTGCCATCCCCT...TGAGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp TGTGTCCTGCCCGGGGCCGGGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCACCAGGCATGAGGAACTaGCCCGCCATGGCCACGAAG +
Preference number: 4 (lower is better)
Translates to: CVLPGAGPSGSMCSRTSPPGMRN*PAMATK
Trigger: CTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCTGG...TGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCAGGACACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CCA 90 bp CCAGGGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCCCAGGCATGAGGAACTaGCCCGCCATGGCCACGAAG +
Preference number: 4 (lower is better)
Translates to: PGPGSHCLLGASGLGPTAPGMRN*PAMATK
Trigger: CTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCTGG...GGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp GGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTTGGGCGCCTCGGGGTTaGGTCCAACAGCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: GQVLTASWAPRGWVQQPPWAPRG*VQQPPQ
Trigger: CTGAGGTGGCTGTTGGACCCAACCCCGAGGCGCCCA...AGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485307.5
3UTR CAA 72 bp CCTGCTGAGCCCGGCGGGCCCAGATGCGTATCAGGCTaGGGTGGGTCCTGCCACCTTGCTCACTTGGTACCG +
Preference number: 4 (lower is better)
Translates to: PAEPGGPRCVSG*GGSCHLAHLVP
Trigger: CGGTACCAAGTGAGCAAGGTGGCAGGACCCACCCAAGCCTGATACGCATCTGGGCCCGCCGGGCTCAGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACTGCGTCTCGCGCCGGGATCCAGGTaGGCAGCACGAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GTGHGPGHCGIFPEQLRLAPGSR*AARGSS
Trigger: AGAAGACCCTCGTGCTGCTCACCTGGATCCCGGCGC...GAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GTGTCGGCGTGGTCCAGCCACTGGAAACACGTGGCCAAGAGTCTGCTTGCCCCTCGGCTAGCCCAGGCATaGGGAACTGGCCCGCCATGG +
Preference number: 4 (lower is better)
Translates to: VSAWSSHWKHVAKSLLAPRLAQA*GTGPPW
Trigger: CCATGGCGGGCCAGTTCCTCATGCCTGGGCTAGCCG...AGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGCTGGACCACGCCGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp TGTGTCCTGCCCGGGGCCGGGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGTAGCAAGAAGGGGTaGGCCAGACTGGCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: CVLPGAGPSGSMCSRTSPGSKKG*ARLASA
Trigger: TGCACTGGCCAGTCTGGCTCACCCCTTCTTGCTACC...TGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCAGGACACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR TCA 90 bp GGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTCACAGAAGAACACGCTaGGGCTCCCCACCGCATGGG +
Preference number: 4 (lower is better)
Translates to: GQVLTASWAPRGWVQQPPHRRTR*GSPPHG
Trigger: CCCATGCGGTGGGGAGCCTCAGCGTGTTCTTCTGTG...AGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR TCA 90 bp GCAGTCCCGGAAACGCTCCACGGTCCTCTCCTGCCTCTGCACGCAGGCAGGCAGCCCTGGAGTGATGTCTaGGGTGACGGCCATCCAAGC +
Preference number: 4 (lower is better)
Translates to: AVPETLHGPLLPLHAGRQPWSDV*GDGHPS
Trigger: GCTTGGATGGCCGTCACCTCAGACATCACTCCAGGG...CTGCCTGCCTGCGTGCAGAGGCAGGAGAGGACCGTGGAGCGTTTCCGGGACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGGACCGCCTCGCCGGCTaGGAGCCATTACCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: APPLCYASDCKQEAGPGRDRLAG*EPLPAD
Trigger: GTCGGCAGGTAATGGCTCTCAGCCGGCGAGGCGGTC...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGAAGGGCCTGCAGCACCTaGCAATCCCGGCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRRACST*QSRHRA
Trigger: CGCCCTGTGCCGGGATTGGCAGGTGCTGCAGGCCCT...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp TGGCCCATCATGCTCCTGGCAAAGCAGTGGTGGATCCCGTACCCCGTCAGCGAGAGGGCCTGCAGCACCTaGCAATCCCGGCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: WPIMLLAKQWWIPYPVSERACST*QSRHRA
Trigger: CGCCCTGTGCCGGGATTGGCAGGTGCTGCAGGCCCT...CTCGCTGACGGGGTACGGGATCCACCACTGCTTTGCCAGGAGCATGATGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR GCA 90 bp GCAGTGGCTGCTCCCCCTTCTTGTGCGGCAGCAGCGGCTGGCGCGTGTAGTGCTCAGCTCGATGATGGGTaGCGTCAGCATGCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: AVAAPPSCAAAAAGACSAQLDDG*RQHAEA
Trigger: GGCTTCGGCATGCTGACGGCACCCATCATCGAGCTG...AGCACTACACGCGCCAGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCCACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR GCA 90 bp GGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACTGCGTCTCTCCACGGTCCTCTCCTaGCTCTGCACGCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GTGHGPGHCGIFPEQLRLSTVLS*LCTQAG
Trigger: GCCTGCCTGCGTGCAGAGGCAGGAGAGGACCGTGGA...GAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTCACCCCCTTCCTCCTGCTaGTGCCTGGACAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: PGSHCLLGASGLGPTATSPPSSC*CLDRTP
Trigger: TGGGGTCCTGTCCAGGCAGCAGCAGGAGGAAGGGGG...TGAGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp GTGTCGGCGTGGTCCAGCCACTGGAAACACGTGGCCAAGAGTCTGCTTGCCCCTAGGGGATGGCAGGGGTaGTGTGTCGCCTCCGTCCGC +
Preference number: 4 (lower is better)
Translates to: VSAWSSHWKHVAKSLLAPRGWQG*CVASVR
Trigger: GCGGACGGAGGCGACACACCACCCCTGCCATCCCCT...AGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGCTGGACCACGCCGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GCAGTCCCGGAAACGCTCCACGGTCCTCTCCTGCCTCTGCACGCAGGCAGGCAGTTCTCAGGCAGGTTCTaGTCCCTGCTCTCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: AVPETLHGPLLPLHAGRQFSGRF*SLLSGS
Trigger: GCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAA...CTGCCTGCCTGCGTGCAGAGGCAGGAGAGGACCGTGGAGCGTTTCCGGGACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACTGCGTCTCGAGGCAGGGAGAGGCTaGCCAGACAGCCTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GTGHGPGHCGIFPEQLRLEAGRG*PDSLPS
Trigger: GGAAGGGAGGCTGTCTGGCCAGCCTCTCCCTGCCTC...GAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GCAGTCCCGGAAACGCTCCACGGTCCTCTCCTGCCTCTGCACGCAGGCAGGCAGCCCCCGTCTCTCAGGTaGTCTGAGAGTGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: AVPETLHGPLLPLHAGRQPPSLR*SESGTW
Trigger: CCAAGTGCCACTCTCAGACCACCTGAGAGACGGGGG...CTGCCTGCCTGCGTGCAGAGGCAGGAGAGGACCGTGGAGCGTTTCCGGGACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGGCGCTGTGCAGAGTGTAGCGCCGGGATCCAGGTaGGCAGCACGAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GLQEACAVAPAQGAVQSVAPGSR*AARGSS
Trigger: AGAAGACCCTCGTGCTGCTCACCTGGATCCCGGCGC...TACACTCTGCACAGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR TCA 90 bp GTAGTCCTTGAGCTCGGCGTTGGTGAGCAGCAGTGGCTGCTCCCCCTTCTTGTGCGGCTAGCCCAGGCATaGGGAACTGGCCCGCCATGG +
Preference number: 4 (lower is better)
Translates to: VVLELGVGEQQWLLPLLVRLAQA*GTGPPW
Trigger: CCATGGCGGGCCAGTTCCTCATGCCTGGGCTAGCCG...CACAAGAAGGGGGAGCAGCCACTGCTGCTCACCAACGCCGAGCTCAAGGACTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR TCA 90 bp GGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGGCGCTGTGCAGAGTGTAATGTGGCCCACAGGCTaGAGGTTGCCCACCCCTCGC +
Preference number: 4 (lower is better)
Translates to: GLQEACAVAPAQGAVQSVMWPTG*RLPTPR
Trigger: GCGAGGGGTGGGCAACCTTCAGCCTGTGGGCCACAT...TACACTCTGCACAGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR TCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCACAGAAGAACACGCTaGGGCTCCCCACCGCATGGG +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPHRRTR*GSPPHG
Trigger: CCCATGCGGTGGGGAGCCTCAGCGTGTTCTTCTGTG...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp GCCAGGAGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGGGCCATCCAAGCTGGTaGTCTTCATGGTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ARSRVPSPQRDRPWPWSLGHPSW*SSWCVL
Trigger: GAGCACACACCATGAAGATCACCAGCTTGGATGGCC...CAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCTCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp ACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGGGGCCGCCTCCAGGATaGAGTGGGGGCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: TRAACARGTFLLEPIWERGPPPG*SGGSGW
Trigger: CCAGCCGCTGCCCCCACTGCATCCTGGAGGCGGCCC...CCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGAACGAGGCCGGCGCGGATaGCGTAGTCCCATGCGCGGC +
Preference number: 4 (lower is better)
Translates to: EAGGHLDSPMRNLRSLPERGRRG*RSPMRG
Trigger: GCCGCGCATGGGACTACGGCATCCGCGCCGGCCTCG...TTCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCGTGAGCAGCAGTGGCTaGTCCCCCTTCTTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPVSSSG*SPFLCG
Trigger: GCCGCACAAGAAGGGGGAGCAGCCACTGCTGCTCAC...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp GGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACTGCGTCTCGTACACCTGTCCAGGTaGAGGCTCAGGGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: GTGHGPGHCGIFPEQLRLVHLSR*RLRGLA
Trigger: AGCGAGGCCCCTGAGCCTGCACCTGGACAGGTGTAC...GAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGCCCGGCGGGCCCAGATaGGTATCAGGCTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGPGGPR*VSGLGG
Trigger: CCCACCCAAGCCTGATACGCATCTGGGCCCGCCGGG...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGGCGCTGTGCAGAGTGTAGGAACTGGCCCGCCATaGCCACGAAGCTCGCCACCA +
Preference number: 4 (lower is better)
Translates to: GLQEACAVAPAQGAVQSVGTGPP*PRSSPP
Trigger: TGGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCC...TACACTCTGCACAGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CCA 90 bp GCAGTCCCGGAAACGCTCCACGGTCCTCTCCTGCCTCTGCACGCAGGCAGGCAGACTCAAACTGCTGGGTaGCCATTAGCCACCGGAGGG +
Preference number: 4 (lower is better)
Translates to: AVPETLHGPLLPLHAGRQTQTAG*PLATGG
Trigger: CCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGT...CTGCCTGCCTGCGTGCAGAGGCAGGAGAGGACCGTGGAGCGTTTCCGGGACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GCCAGGAGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGCGATGCAGACCTTCTTaGGCCTCCGGGAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: ARSRVPSPQRDRPWPWSLRCRPS*ASGKAL
Trigger: AAGAGCTTTCCCGGAGGCCCAAGAAGGTCTGCATCG...CAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCTCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GGGTTCCGCAGGCCGGGCTACATGGCCTTCATGCCGTTGGCCGTGGCACCCTCGCGATGCAGACCTTCTTaGGCCTCCGGGAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: GFRRPGYMAFMPLAVAPSRCRPS*ASGKAL
Trigger: AAGAGCTTTCCCGGAGGCCCAAGAAGGTCTGCATCG...CGAGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCTCATGCCGTTGGCCGTaGCACCCTCGGGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPSCRWP*HPRAVC
Trigger: ACACACTGCCCGAGGGTGCCACGGCCAACGGCATGA...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp GTGAGGATCATGAAGAGCAGCAGCCCTCCCCTGCGCCCGAGGAATCGGACCACCGGTTGTGCAGCTCGATaGTGGGTGCCGTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: VRIMKSSSPPLRPRNRTTGCAAR*WVPSAC
Trigger: GCATGCTGACGGCACCCATCATCGAGCTGCACAACC...GGTGGTCCGATTCCTCGGGCGCAGGGGAGGGCTGCTGCTCTTCATGATCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR TCA 90 bp TCGATGATGGGTGCCGTCAGCATGCCGAAGCCCGCGCTGGCCAGCACCAGCCCCATTTGGACTCACCTATaGGGAATCTCCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SMMGAVSMPKPALASTSPIWTHL*GISAPC
Trigger: GCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAAT...GGGGCTGGTGCTGGCCAGCGCGGGCTTCGGCATGCTGACGGCACCCATCATCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR TCA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCGACCGCCTCGCCGGCTaGGAGCCATTACCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: QVVPAQELPVHEGLFCWSDRLAG*EPLPAD
Trigger: GTCGGCAGGTAATGGCTCTCAGCCGGCGAGGCGGTC...GCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACTGCGTCTCCCACCTCGGGGCGAGTaGAGACACAGCTTACAGAGG +
Preference number: 4 (lower is better)
Translates to: GTGHGPGHCGIFPEQLRLPPRGE*RHSLQR
Trigger: CCTCTGTAAGCTGTGTCTTCACTCGCCCCGAGGTGG...GAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GCCAGGAGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGGTCTCTCAGGTGGTCTaGGAGTGGCACTTGGTAAAC +
Preference number: 4 (lower is better)
Translates to: ARSRVPSPQRDRPWPWSLVSQVV*EWHLVN
Trigger: GTTTACCAAGTGCCACTCTCAGACCACCTGAGAGAC...CAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCTCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CCAGGGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCAGCCAGAGACAGAGCTaGCGCTGGTTAATCCCACAC +
Preference number: 4 (lower is better)
Translates to: PGPGSHCLLGASGLGPTASQRQS*RWLIPH
Trigger: GTGTGGGATTAACCAGCGTCAGCTCTGTCTCTGGCT...GGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR GCA 90 bp GTGGCCCACAGGCTGAAGGTTGCCCACCCCTCGCCTAGAAGAGATAGGGGGACTTGTGGTGGTGACCCCTaGCAGCTCGGTGCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: VAHRLKVAHPSPRRDRGTCGGDP*QLGAFA
Trigger: GGCAAAGGCACCGAGCTGGCAGGGGTCACCACCACA...AGTCCCCCTATCTCTTCTAGGCGAGGGGTGGGCAACCTTCAGCCTGTGGGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGGGAGGCTGGTCCAGTTaGCCATGTCCCCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: CVSLPREVIPFVISERERGGWSS*PCPRPG
Trigger: GCCGGGGCGGGGACATGGGCAACTGGACCAGCCTCC...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GAACCACAAGCTGCAACTAGTGGGAAGTGTGGGGATTGTGTGTCCTGCCCGGGGTGCTGTTGCTCCGGTTaGCCGCAGCCTCCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: EPQAATSGKCGDCVSCPGCCCSG*PQPPRG
Trigger: CCCCCTGGGAGGCTGCGGGCAACCGGAGCAACAGCA...CCCCGGGCAGGACACACAATCCCCACACTTCCCACTAGTTGCAGCTTGTGGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp GGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTGATGCCGTAGTCCCATaGGCGGCAGTCACAGTTGGA +
Preference number: 4 (lower is better)
Translates to: GQVLTASWAPRGWVQQPPDAVVP*AAVTVG
Trigger: TCCAACTGTGACTGCCGCGCATGGGACTACGGCATC...AGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR GCA 90 bp GGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTCCACCACCTTCACGATaGAGACCTTCTTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GQVLTASWAPRGWVQQPPPPPSR*RPSWAS
Trigger: GGAGGCCCAAGAAGGTCTGCATCGTGAAGGTGGTGG...AGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR GCA 90 bp GGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTCCTCGTGGCCCATCATaGTCCTGGCAAAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GQVLTASWAPRGWVQQPPPRGPS*SWQSSG
Trigger: ACCACTGCTTTGCCAGGAGCATGATGGGCCACGAGG...AGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR GCA 90 bp CCAGGGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCAGGACACCAGCGCGATaGTGGCCGTGGTATAGTAGT +
Preference number: 4 (lower is better)
Translates to: PGPGSHCLLGASGLGPTARTPAR*WPWYSS
Trigger: ACTACTATACCACGGCCAGCATCGCGCTGGTGTCCT...GGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR GCA 90 bp GAAATGTTCTCAGGCAGGTTCTGGTCCCTGCTCTCGGGCAGCAGGAGGATGCAGGCAGCAGCCCTCCCCTaGGCCCGAGGAATCGGACCA +
Preference number: 4 (lower is better)
Translates to: EMFSGRFWSLLSGSRRMQAAALP*ARGIGP
Trigger: TGGTCCGATTCCTCGGGCGCAGGGGAGGGCTGCTGC...CTGCATCCTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAACATTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CCA 90 bp TCGATGATGGGTGCCGTCAGCATGCCGAAGCCCGCGCTGGCCAGCACCAGCCCCAACATCATCGGTTTCTaGGTGAAGGCGGCAGACACC +
Preference number: 4 (lower is better)
Translates to: SMMGAVSMPKPALASTSPNIIGF*VKAADT
Trigger: GGTGTCTGCCGCCTTCACCCAGAAACCGATGATGTT...GGGGCTGGTGCTGGCCAGCGCGGGCTTCGGCATGCTGACGGCACCCATCATCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CCA 90 bp GCCCCAGACCCTGGAGCCCCGGGTTCCGCAGGCCGGGCTACATGGCCTTCATGCCACACAAGATCCCACTaGCTCCGAACATCATCGGTT +
Preference number: 4 (lower is better)
Translates to: APDPGAPGSAGRATWPSCHTRSH*LRTSSV
Trigger: AACCGATGATGTTCGGAGCCAGTGGGATCTTGTGTG...GCATGAAGGCCATGTAGCCCGGCCTGCGGAACCCGGGGCTCCAGGGTCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCTCCTGGCAAAGCAGTaGTGGATCCCGTACCCCGTC +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPLLAKQ*WIPYPV
Trigger: GACGGGGTACGGGATCCACCACTGCTTTGCCAGGAG...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGTGCCGAAGCCCGCGCTaGCCAGCACCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLCRSPR*PAPAPA
Trigger: GGCTGGGGCTGGTGCTGGCCAGCGCGGGCTTCGGCA...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAAGCTGCCCCAGACCCTaGAGCCCCGGGTTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LLRPALLGLLERQDFPTPSCPRP*SPGFRR
Trigger: CCTGCGGAACCCGGGGCTCCAGGGTCTGGGGCAGCT...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp AGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATTGTGTGCTCAAGGTGTaGGTGACGGGCGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SRVPSPQRDRPWPWSLWHCVLKV*VTGVCV
Trigger: CACACACACGCCCGTCACCCACACCTTGAGCACACA...ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATCTGGTATCACACCCTTaGTGTCGCCCTCAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: SRVPSPQRDRPWPWSLWHLVSHP*CRPQGS
Trigger: TGAACCCTGAGGGCGACATCAAGGGTGTGATACCAG...ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGGCCGAGCTGCAGGAGTaGGGCCAGGGCGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: CVSLPREVIPFVISERERAELQE*GQGGED
Trigger: ATCCTCACCGCCCTGGCCTCACTCCTGCAGCTCGGC...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GCAGTCCCGGAAACGCTCCACGGTCCTCTCCTGCCTCTGCACGCAGGCAGGCAGTTATCACCGTCGGGGTaGTCTCCGCACAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: AVPETLHGPLLPLHAGRQLSPSG*SPHRRT
Trigger: TGTTCTTCTGTGCGGAGATCACCCCGACGGTGATAA...CTGCCTGCCTGCGTGCAGAGGCAGGAGAGGACCGTGGAGCGTTTCCGGGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATAGGCAGGGGCAGCGTTaGGCTTTGGTGAGTTATTGC +
Preference number: 4 (lower is better)
Translates to: SRVPSPQRDRPWPWSLWHRQGQR*ALVSYC
Trigger: GCAATAACTCACCAAAGCTCAACGCTGCCCCTGCCT...ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGGCGCTGTGCAGAGTGTACCTTCAGGAAGCATGTaGAGTCGCACCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLQEACAVAPAQGAVQSVPSGSM*SRTSPG
Trigger: CCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGG...TACACTCTGCACAGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCCACCACCTTCACGATaGAGACCTTCTTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPPPPSR*RPSWAS
Trigger: GGAGGCCCAAGAAGGTCTGCATCGTGAAGGTGGTGG...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp GGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACTGCGTCTCCCTCGTGGCCCATCATaGTCCTGGCAAAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GTGHGPGHCGIFPEQLRLPRGPS*SWQSSG
Trigger: ACCACTGCTTTGCCAGGAGCATGATGGGCCACGAGG...GAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGAAGCAGCAGCCCTCCCCTaGGCCCGAGGAATCGGACCA +
Preference number: 4 (lower is better)
Translates to: EAGGHLDSPMRNLRSLPEAAALP*ARGIGP
Trigger: TGGTCCGATTCCTCGGGCGCAGGGGAGGGCTGCTGC...TTCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCTTGAGGAGGCCGAGCTaGAGGAGTGAGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: QVVPAQELPVHEGLFCWSLRRPS*RSEARA
Trigger: CGCCCTGGCCTCACTCCTGCAGCTCGGCCTCCTCAA...GCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCATGGGTGCCGTCAGCATaGCGAAGCCCGCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LLRPALLGLLERQDFPTPWVPSA*RSPRWP
Trigger: TGGCCAGCGCGGGCTTCGGCATGCTGACGGCACCCA...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp GTGATCTCCGCACAGAAGAACACGCTGAGGCTCCCCACCGCATGGGAGGCAAACGTGAGCAGCAGTGGCTaGTCCCCCTTCTTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: VISAQKNTLRLPTAWEANVSSSG*SPFLCG
Trigger: GCCGCACAAGAAGGGGGAGCAGCCACTGCTGCTCAC...GTTTGCCTCCCATGCGGTGGGGAGCCTCAGCGTGTTCTTCTGTGCGGAGATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR GCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCTGGTCTGTAAACCTGTaGCCAAGCTGCCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPWSVNL*PSCPRP
Trigger: GGGTCTGGGGCAGCTTGGGCACAGGTTTACAGACCA...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCTGCCGGCACAAGAGCTaGCTGTGCACGAGGGACTTT +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPCRHKS*LCTRDF
Trigger: AAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCA...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp GCCCCAGACCCTGGAGCCCCGGGTTCCGCAGGCCGGGCTACATGGCCTTCATGCCCCCTTCTGTGGATTTaGCTCTGCCATCTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: APDPGAPGSAGRATWPSCPLLWI*LCHLFE
Trigger: CTCAAAAAGATGGCAGAGGCAAATCCACAGAAGGGG...GCATGAAGGCCATGTAGCCCGGCCTGCGGAACCCGGGGCTCCAGGGTCTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR GCA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGGGAATCTCCGCTCCCTaGCCGAAGCCCCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGGISAP*PKPHLC
Trigger: ACAGAGGTGGGGCTTCGGGCAGGGAGCGGAGATTCC...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp GCCAGGAGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGGTGAGTGCTGTCCCTTaGCACCAACTTCCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: ARSRVPSPQRDRPWPWSLVSAVP*HQLPRD
Trigger: ATCTCTAGGAAGTTGGTGGCAAGGGACAGCACTCAC...CAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGGACCTCCCCCGCACATaGGATACCTCGGGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLDLPRT*DTSGRA
Trigger: CGCCCGGCCCGAGGTATCGCATGTGCGGGGGAGGTC...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCTGGCGAAGGGGGTGGTaGGGAGGCTGGTCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: QVVPAQELPVHEGLFCWSWRRGW*GGWSSC
Trigger: GCAACTGGACCAGCCTCCCCACCACCCCCTTCGCCA...GCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCCTTGTCCGGAGGGGATaGCAGGGGTGGTGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: REAGGHLDSPMRNLRSLPLVRRG*QGWCVA
Trigger: GGCGACACACCACCCCTGCCATCCCCTCCGGACAAG...GGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GTGTCGGCGTGGTCCAGCCACTGGAAACACGTGGCCAAGAGTCTGCTTGCCCCTCGCGGCAGTCACAGTTaGAGGCGTTGTCCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: VSAWSSHWKHVAKSLLAPRGSHS*RRCPPC
Trigger: ACAAGGGGGACAACGCCTCCAACTGTGACTGCCGCG...AGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGCTGGACCACGCCGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGACTGGCAAAGCAGTGGTaGATCCCGTACCCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRLAKQW*IPYPVS
Trigger: GCTGACGGGGTACGGGATCCACCACTGCTTTGCCAG...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGACTCCTGGCAAAGCAGTaGTGGATCCCGTACCCCGTC +
Preference number: 4 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRLLAKQ*WIPYPV
Trigger: GACGGGGTACGGGATCCACCACTGCTTTGCCAGGAG...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CCAGGGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCGCGCGATGCTGGCCGTaGTATAGTAGTCAGCATAGA +
Preference number: 4 (lower is better)
Translates to: PGPGSHCLLGASGLGPTAARCWP*YSSQHR
Trigger: TCTATGCTGACTACTATACCACGGCCAGCATCGCGC...GGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp CCAGGGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCCCTGAGTCTGGGTGCTaGCTGTACTTTCCAATCAGG +
Preference number: 4 (lower is better)
Translates to: PGPGSHCLLGASGLGPTAPESGC*LYFPIR
Trigger: CCTGATTGGAAAGTACAGCCAGCACCCAGACTCAGG...GGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATGCCGAAGCCCGCGCTaGCCAGCACCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGCRSPR*PAPAPA
Trigger: GGCTGGGGCTGGTGCTGGCCAGCGCGGGCTTCGGCA...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp GAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCTGCCGAAGCCCGCGCTaGCCAGCACCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: EFVSSDPRSLDFWKDRISCRSPR*PAPAPA
Trigger: GGCTGGGGCTGGTGCTGGCCAGCGCGGGCTTCGGCA...GGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp GATGATGTGGTGCAGGAAGTAGCCTTTCTGGTTGTGCAGCTCGATGATGGGTGCTGCCGAAGCCCGCGCTaGCCAGCACCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: DDVVQEVAFLVVQLDDGCCRSPR*PAPAPA
Trigger: GGCTGGGGCTGGTGCTGGCCAGCGCGGGCTTCGGCA...GCACCCATCATCGAGCTGCACAACCAGAAAGGCTACTTCCTGCACCACATCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCGTTGGTGAGCAGCAGTaGCTGCTCCCCCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPVGEQQ*LLPLLV
Trigger: CACAAGAAGGGGGAGCAGCCACTGCTGCTCACCAAC...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp TCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCATGTGTGCTCAAGGTGTaGGTGACGGGCGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SHLPRGTGHGPGHCGIFPCVLKV*VTGVCV
Trigger: CACACACACGCCCGTCACCCACACCTTGAGCACACA...TGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACTGCGTCTCGCCACTGGAAACACGTaGCCAAGAGTCTGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GTGHGPGHCGIFPEQLRLATGNT*PRVCLP
Trigger: GGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGC...GAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAGCCACTGGAAACACGTaGCCAAGAGTCTGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SHLPRGTGHGPGHCGIFPATGNT*PRVCLP
Trigger: GGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGC...TGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CAA 72 bp GTATCAGGCTTGGGTGGGTCCTGCCACCTTGCTCACTaGGTACCGGATTTCCCGGGGCTGTGCCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: VSGLGGSCHLAH*VPDFPGLCPQG
Trigger: TCCCTGTGGGCACAGCCCCGGGAAATCCGGTACCAAGTGAGCAAGGTGGCAGGACCCACCCAAGCCTGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CAA 72 bp CCAGATGCGTATCAGGCTTGGGTGGGTCCTGCCACCTaGCTCACTTGGTACCGGATTTCCCGGGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PDAYQAWVGPAT*LTWYRISRGCA
Trigger: GGCACAGCCCCGGGAAATCCGGTACCAAGTGAGCAAGGTGGCAGGACCCACCCAAGCCTGATACGCATCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GTGGCCCACAGGCTGAAGGTTGCCCACCCCTCGCCTAGAAGAGATAGGGGGACTCAAGATCCCACTTGCTaGCCACGTTCTGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: VAHRLKVAHPSPRRDRGTQDPTC*PRSGRG
Trigger: GCCTCGTCCAGAACGTGGTCAGCAAGTGGGATCTTG...AGTCCCCCTATCTCTTCTAGGCGAGGGGTGGGCAACCTTCAGCCTGTGGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR TCA 90 bp GGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGGCGCTGTGCAGAGTGTAAACAGACAGTGGGCCTaGTGTGGCCCACAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: GLQEACAVAPAQGAVQSVNRQWA*CGPQAE
Trigger: TTCAGCCTGTGGGCCACATCAGGCCCACTGTCTGTT...TACACTCTGCACAGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR TCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCTGGTATCACACCCTTaGTGTCGCCCTCAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPLVSHP*CRPQGS
Trigger: TGAACCCTGAGGGCGACATCAAGGGTGTGATACCAG...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCACTTTCCAATCAGGTTaGGGAGGCCGAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPTFQSG*GGRAAG
Trigger: TCCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGT...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGAGCTGTCACTCATCCCTaGGTCTGGGTGCTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRAVTHP*VWVLAV
Trigger: TACAGCCAGCACCCAGACTCAGGGATGAGTGACAGC...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCATGACCAGAAGAGTGTaGGTGCTGTCCCTTGCCACC +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPMTRRV*VLSLAT
Trigger: GGTGGCAAGGGACAGCACTCACACTCTTCTGGTCAT...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GCCAGGCTGTCCAGAAAAGCTGGTGCCCAAGTTGCTACAAAGTGGTGCCTGCCCGGACTCGAAGCAGAGTaGGAGGCCTCCCTCCACCCA +
Preference number: 4 (lower is better)
Translates to: ARLSRKAGAQVATKWCLPGLEAE*EASLHP
Trigger: TGGGTGGAGGGAGGCCTCTCACTCTGCTTCGAGTCC...GGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTCACAGACGCTCAGACACTaGCATATTTCCTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PGSHCLLGASGLGPTATSQTLRH*HISWAQ
Trigger: CTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCTG...TGAGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR TCA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGAGCTCTGTTCCTCTGCTaGGTGAACGCTGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRALFLC*VNAGSF
Trigger: GAAGGAGCCAGCGTTCACTCAGCAGAGGAACAGAGC...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490273.5
CDS-3UTR GCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCAGGAGGCTGGTCCAGTTaGCCATGTCCCCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSGGWSS*PCPRPG
Trigger: GCCGGGGCGGGGACATGGGCAACTGGACCAGCCTCC...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCACTCCGTCCGCGCCGCTaGTGTTGCTCCGGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSLRPRR*CCSGCP
Trigger: CGGGCAACCGGAGCAACAGCAGCGGCGCGGACGGAG...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGTGGGTGCCGTCAGCATaGCGAAGCCCGCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PALLGLLERQDFPTPVERWVPSA*RSPRWP
Trigger: TGGCCAGCGCGGGCTTCGGCATGCTGACGGCACCCA...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp GCCAGGCTGTCCAGAAAAGCTGGTGCCCAAGTTGCTACAAAGTGGTGCCTGCCCGTGAGCAGCAGTGGCTaGTCCCCCTTCTTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: ARLSRKAGAQVATKWCLPVSSSG*SPFLCG
Trigger: GCCGCACAAGAAGGGGGAGCAGCCACTGCTGCTCAC...GGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GTGTCGGCGTGGTCCAGCCACTGGAAACACGTGGCCAAGAGTCTGCTTGCCCCTTGGTCTGTAAACCTGTaGCCAAGCTGCCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: VSAWSSHWKHVAKSLLAPWSVNL*PSCPRP
Trigger: GGGTCTGGGGCAGCTTGGGCACAGGTTTACAGACCA...AGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGCTGGACCACGCCGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGAAGCCCTGCGGGCGGCGGTaGGGGCAAAGGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LEVTSLSHPGPRPQFPWKPCGRR*GQRLLL
Trigger: GAGCAGCAGCCTTTGCCCGCACCGCCGCCCGCAGGG...CTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAAGACCTCCCCCGCACATaGGATACCTCGGGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: ACARGTFLLEPIWERRNKDLPRT*DTSGRA
Trigger: CGCCCGGCCCGAGGTATCGCATGTGCGGGGGAGGTC...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCCTGCCTTCCTCCTGCTGCTaGCTGGACAGGACCCCAGGG +
Preference number: 4 (lower is better)
Translates to: DTDIFPGPRVAPCSPFLLPSSCC*LDRTPG
Trigger: CCCTGGGGTCCTGTCCAGGCAGCAGCAGGAGGAAGG...CAGGAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp GAACCACAAGCTGCAACTAGTGGGAAGTGTGGGGATTGTGTGTCCTGCCCGGGGCGCGGCACCAGAAGTTaGGCTGGTCCAGGAGGAACG +
Preference number: 4 (lower is better)
Translates to: EPQAATSGKCGDCVSCPGRGTRS*AGPGGT
Trigger: CGTTCCTCCTGGACCAGCCCAACTTCTGGTGCCGCG...CCCCGGGCAGGACACACAATCCCCACACTTCCCACTAGTTGCAGCTTGTGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CCA 90 bp GGCATCTTCCCAGAGCAACTGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGGGTGGTGGGGAGGCTaGTCCAGTTGCCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: GIFPEQLRLAAQGGDSICGWWGG*SSCPCP
Trigger: GGGACATGGGCAACTGGACCAGCCTCCCCACCACCC...ACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGAGGGGATGGCAGGGGTaGTGTGTCGCCTCCGTCCGC +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLRGWQG*CVASVR
Trigger: GCGGACGGAGGCGACACACCACCCCTGCCATCCCCT...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TGTGTCCTGCCCGGGGCCGGGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGCAGATTTTTGGAGCTaGGTGATGGGCTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: CVLPGAGPSGSMCSRTSPADFWS*VMGSFH
Trigger: GTGGAATGAGCCCATCACCCAGCTCCAAAAATCTGC...TGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCAGGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CCA 90 bp GGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACTGCGTCTCAAGGCGGCAGACACCTaGCAGCGCCCAAGGAATAAA +
Preference number: 4 (lower is better)
Translates to: GTGHGPGHCGIFPEQLRLKAADT*QRPRNK
Trigger: TTTATTCCTTGGGCGCTGCCAGGTGTCTGCCGCCTT...GAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380302.8
CDS-3UTR CCA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGAGGCCCATCATGCTCCTaGCAAAGCAGTGGTGGATCC +
Preference number: 4 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRGPSCS*QSSGGS
Trigger: GGATCCACCACTGCTTTGCCAGGAGCATGATGGGCC...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp GAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGAAGCAGGCCGGGCTACATaGCCTTCATGCCGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: EAGGHLDSPMRNLRSLPEAGRAT*PSCRWP
Trigger: CGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGC...TTCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp GCCATGTTTTCAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTAGCTGCCCCAGACCCTaGAGCCCCGGGTTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: AMFSSSAGTRAACARGTFSCPRP*SPGFRR
Trigger: CCTGCGGAACCCGGGGCTCCAGGGTCTGGGGCAGCT...AAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTGAAAACATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGCTGCTGCTCCCGGGGTaGCCGCGCTGTATTTCTCCG +
Preference number: 4 (lower is better)
Translates to: CVSLPREVIPFVISERERLLLPG*PRCISP
Trigger: CGGAGAAATACAGCGCGGCCACCCCGGGAGCAGCAG...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GCAGTCCCGGAAACGCTCCACGGTCCTCTCCTGCCTCTGCACGCAGGCAGGCAGGAAACCTCCACTTTCTaGGGTGAAACGAGGAACACG +
Preference number: 4 (lower is better)
Translates to: AVPETLHGPLLPLHAGRQETSTF*GETRNT
Trigger: CGTGTTCCTCGTTTCACCCCAGAAAGTGGAGGTTTC...CTGCCTGCCTGCGTGCAGAGGCAGGAGAGGACCGTGGAGCGTTTCCGGGACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATCAAGTTGCTACAAAGTaGTGCCTGCCCTTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SRVPSPQRDRPWPWSLWHQVATK*CLPLPR
Trigger: CCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTG...ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCGTGACAGACGGTGCTaGGAAGTGGGCAGCCGTAGC +
Preference number: 4 (lower is better)
Translates to: QVVPAQELPVHEGLFCWSRDRRC*EVGSRS
Trigger: GCTACGGCTGCCCACTTCCCAGCACCGTCTGTCACG...GCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GCCAGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCGAAGCCGGCGTCCCCTaGGGTGTCTCCCATGACGCA +
Preference number: 4 (lower is better)
Translates to: ARRSDTDIFPGPRVAPCSEAGVP*GVSHDA
Trigger: TGCGTCATGGGAGACACCCCAGGGGACGCCGGCTTC...GGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR TCA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGACGGCTAGCCCAGGCATaGGGAACTGGCCCGCCATGG +
Preference number: 4 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGRLAQA*GTGPPW
Trigger: CCATGGCGGGCCAGTTCCTCATGCCTGGGCTAGCCG...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp GGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTTGCGATTCTTCTGTGTaGAGTGGAGGATCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GQVLTASWAPRGWVQQPPCDSSV*SGGSAS
Trigger: AGAGGCTGATCCTCCACTTCACACAGAAGAATCGCA...AGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR TCA 90 bp CCGTTAGAAATGTTCTCAGGCAGGTTCTGGTCCCTGCTCTCGGGCAGCAGGAGGCCCTGGAGTGATGTCTaGGGTGACGGCCATCCAAGC +
Preference number: 4 (lower is better)
Translates to: PLEMFSGRFWSLLSGSRRPWSDV*GDGHPS
Trigger: GCTTGGATGGCCGTCACCTCAGACATCACTCCAGGG...CCTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAACATTTCTAACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR TCA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGATCTGTGCTATGCGAGTaGCTGCAAGCAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRSVLCE*LQAGSW
Trigger: CCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGA...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR TCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCAAAACACACGGGACATaGAAGCGAGGTGGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPKTHGT*KRGGAF
Trigger: GAAGGCACCACCTCGCTTTCATGTCCCGTGTGTTTT...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GTGTCGGCGTGGTCCAGCCACTGGAAACACGTGGCCAAGAGTCTGCTTGCCCCTCTTCAGCTGCAGTTCTaGGTCTGGGTGCTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: VSAWSSHWKHVAKSLLAPLQLQF*VWVLAV
Trigger: TACAGCCAGCACCCAGACTCAGAACTGCAGCTGAAG...AGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGCTGGACCACGCCGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436008.6
CDS-3UTR GCA 90 bp TGCTATGAACGAGCACCGTCAGAGAATTCCCACCCACACGTACAGAAACACAGTGGGCCGCCTCCAGGATaGAGTGGGGGCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: CYERAPSENSHPHVQKHSGPPPG*SGGSGW
Trigger: CCAGCCGCTGCCCCCACTGCATCCTGGAGGCGGCCC...ACTGTGTTTCTGTACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CTGGCCAGTGCATTTGCAGATTTTTGGAGCTGGGTGATGGGCTCATTCCACTCTCCGCGCCGCTGCTGTTaGTCCGGTTGCCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LASAFADFWSWVMGSFHSPRRCC*SGCPQP
Trigger: AGGCTGCGGGCAACCGGAGCAACAGCAGCGGCGCGG...AGAGTGGAATGAGCCCATCACCCAGCTCCAAAAATCTGCAAATGCACTGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp TGTGTCCTGCCCGGGGCCGGGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCACGACCCAGTCAGCAATaGATCCAGTTATTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: CVLPGAGPSGSMCSRTSPRPSQQ*IQLLGS
Trigger: GCTACCTAATAACTGGATGCATTGCTGACTGGGTCG...TGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCAGGACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp CCAGGGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCCGACCCAGTCAGCAATaGATCCAGTTATTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: PGPGSHCLLGASGLGPTARPSQQ*IQLLGS
Trigger: GCTACCTAATAACTGGATGCATTGCTGACTGGGTCG...GGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR GCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGTTGAGGAGGCCGAGCTaGAGGAGTGAGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLLRRPS*RSEARA
Trigger: CGCCCTGGCCTCACTCCTGCAGCTCGGCCTCCTCAA...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp TCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCACATGGGAGGCAAACATaGCCACGATGGAAAACGCGA +
Preference number: 4 (lower is better)
Translates to: SHLPRGTGHGPGHCGIFPHGRQT*PRWKTR
Trigger: TCGCGTTTTCCATCGTGGGCATGTTTGCCTCCCATG...TGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGCAGGTTCTGGTCCCTaGTCTCGGGCAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LLRPALLGLLERQDFPTPAGSGP*SRAAGG
Trigger: TCCTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGC...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGGTGAGCAGCAGTGGCTaGTCCCCCTTCTTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: CVSLPREVIPFVISERERVSSSG*SPFLCG
Trigger: GCCGCACAAGAAGGGGGAGCAGCCACTGCTGCTCAC...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAATGTGTCACCCGCGGCTaGGGCATCGTGGAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: ACARGTFLLEPIWERRNKCVTRG*GIVEAR
Trigger: TCGGGCCTCCACGATGCCGCAGCCGCGGGTGACACA...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp TCGGTTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGGGGCTCCTGGGTGCTaGCAGGAGCCGTGTCCCATC +
Preference number: 4 (lower is better)
Translates to: SVGSHFIVSPRPETTISLGAPGC*QEPCPI
Trigger: GATGGGACACGGCTCCTGGCAGCACCCAGGAGCCCC...CAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAACCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATGTGAGCTGCTTTCCCTaGACACGAACAGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SRVPSPQRDRPWPWSLWHVSCFP*TRTEAL
Trigger: AAGAGCTTCTGTTCGTGTGCAGGGAAAGCAGCTCAC...ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GTGTCGGCGTGGTCCAGCCACTGGAAACACGTGGCCAAGAGTCTGCTTGCCCCTACGGCGTCTGTGAGCTaGTTTCCCTGCACACGAACA +
Preference number: 4 (lower is better)
Translates to: VSAWSSHWKHVAKSLLAPTASVS*FPCTRT
Trigger: TGTTCGTGTGCAGGGAAAGCAGCTCACAGACGCCGT...AGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGCTGGACCACGCCGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TGGCCCATCATGCTCCTGGCAAAGCAGTGGTGGATCCCGTACCCCGTCAGCGAGACGGCGTCTGTGAGCTaGTTTCCCTGCACACGAACA +
Preference number: 4 (lower is better)
Translates to: WPIMLLAKQWWIPYPVSETASVS*FPCTRT
Trigger: TGTTCGTGTGCAGGGAAAGCAGCTCACAGACGCCGT...CTCGCTGACGGGGTACGGGATCCACCACTGCTTTGCCAGGAGCATGATGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR GCA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGTGCCGGCACAAGAGCTaGCTGTGCACGAGGGACTTT +
Preference number: 4 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGCRHKS*LCTRDF
Trigger: AAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCA...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGATGCTATGCGAGTGACTaGAAGCAGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRCYASD*KQEAGP
Trigger: TGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCA...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp CTGTCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGCCCTGCGGGCGGCGGTaGGGGCAAAGGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LSLSRLGCPTSFLRKCQEPCGRR*GQRLLL
Trigger: GAGCAGCAGCCTTTGCCCGCACCGCCGCCCGCAGGG...CTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGGATTTCCCGGGGCTGTaGCCACAGGGAAGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGDFPGL*PQGSVA
Trigger: AGCAACACTTCCCTGTGGGCACAGCCCCGGGAAATC...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCTGGGTCCTGCCACCTTaGTCACTTGGTACCGGATTT +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPWVLPP*SLGTGF
Trigger: AAATCCGGTACCAAGTGAGCAAGGTGGCAGGACCCA...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGCTTGTCCGGAGGGGATaGCAGGGGTGGTGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: PALLGLLERQDFPTPVERLVRRG*QGWCVA
Trigger: GGCGACACACCACCCCTGCCATCCCCTCCGGACAAG...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCCTTGTCCGGAGGGGATaGCAGGGGTGGTGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: SDTDIFPGPRVAPCSPFLLVRRG*QGWCVA
Trigger: GGCGACACACCACCCCTGCCATCCCCTCCGGACAAG...GAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp GCCAGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCTTGCTGACCACGTTCTaGACGAGGCCGGCGCGGATG +
Preference number: 4 (lower is better)
Translates to: ARRSDTDIFPGPRVAPCSLLTTF*TRPARM
Trigger: CATCCGCGCCGGCCTCGTCCAGAACGTGGTCAGCAA...GGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp TGCCCGGGGCCGGGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGGCGCTGAGAACTTAGCGATATaGACCTTCCAGGCATTATCA +
Preference number: 4 (lower is better)
Translates to: CPGPGLQEACAVAPAQGAENLAI*TFQALS
Trigger: TGATAATGCCTGGAAGGTCCATATCGCTAAGTTCTC...AGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGGGAACTGGCCCGCCATaGCCACGAAGCTCGCCACCA +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLGTGPP*PRSSPP
Trigger: TGGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCC...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp GGCATCTTCCCAGAGCAACTGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTCCAGGCATGAGGAACTaGCCCGCCATGGCCACGAAG +
Preference number: 4 (lower is better)
Translates to: GIFPEQLRLAAQGGDSICPGMRN*PAMATK
Trigger: CTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCTGG...ACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCAACATCATCGGTTTCTaGGTGAAGGCGGCAGACACC +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPNIIGF*VKAADT
Trigger: GGTGTCTGCCGCCTTCACCCAGAAACCGATGATGTT...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGGCAGACTCAAACTGCTaGGTGGCCATTAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGADSNC*VAISHR
Trigger: CCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGC...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACTGCCGAAGCCCGCGCTaGCCAGCACCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDCRSPR*PAPAPA
Trigger: GGCTGGGGCTGGTGCTGGCCAGCGCGGGCTTCGGCA...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp GAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGAATCATGCCGTTGGCCGTaGCACCCTCGGGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: EAGGHLDSPMRNLRSLPESCRWP*HPRAVC
Trigger: ACACACTGCCCGAGGGTGCCACGGCCAACGGCATGA...TTCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGTGGCCTTCATGCCGTTaGCCGTGGCACCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: PALLGLLERQDFPTPVERWPSCR*PWHPRA
Trigger: TGCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCA...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGGCAGGCCGGGCTACATaGCCTTCATGCCGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLAGRAT*PSCRWP
Trigger: CGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGC...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGATGCGTGTTCGGTCCCTaGTCTGTAAACCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRCVFGP*SVNLCP
Trigger: TGGGCACAGGTTTACAGACCAGGGACCGAACACGCA...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCACAGAGGGACCGGCCATaGCCCTGGTCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LLRPALLGLLERQDFPTPQRDRP*PWSLWH
Trigger: ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTG...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCAGACCACAATTTCCCTaGAAGGACACAGCCCATGGC +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPRPQFP*KDTAHG
Trigger: GCCATGGGCTGTGTCCTTCCAGGGAAATTGTGGTCT...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCCTGGTTCTCACTGCCTCTTaGGCGCCTCGGGGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: DTDIFPGPRVAPCSPFLLVLTAS*APRGWV
Trigger: GACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAAC...CAGGAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR TCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCGCCGAGCTGCAGGAGTaGGGCCAGGGCGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGLLERQDFAELQE*GQGGED
Trigger: ATCCTCACCGCCCTGGCCTCACTCCTGCAGCTCGGC...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGCACAGAAGAACACGCTaGGGCTCCCCACCGCATGGG +
Preference number: 4 (lower is better)
Translates to: PALLGLLERQDFPTPVERHRRTR*GSPPHG
Trigger: CCCATGCGGTGGGGAGCCTCAGCGTGTTCTTCTGTG...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGATTATCACCGTCGGGGTaGTCTCCGCACAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRLSPSG*SPHRRT
Trigger: TGTTCTTCTGTGCGGAGATCACCCCGACGGTGATAA...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGTGCAGCAGGCAAAGATaGTGTGGTGCAGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: APPLCYASDCKQEAGPGRCSRQR*CGAGSS
Trigger: GCTACTTCCTGCACCACATCATCTTTGCCTGCTGCA...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR TCA 90 bp AGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATAAAGTAGTGACGCAGTaGGGTCTGAATGAACACGGA +
Preference number: 4 (lower is better)
Translates to: SRVPSPQRDRPWPWSLWHKVVTQ*GLNEHG
Trigger: TCCGTGTTCATTCAGACCTCACTGCGTCACTACTTT...ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACGAGCAGCAGCTCGGGTaGGGGCCGCCTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDEQQLG*GPPPGC
Trigger: GCATCCTGGAGGCGGCCCGCACCCGAGCTGCTGCTC...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GAACCACAAGCTGCAACTAGTGGGAAGTGTGGGGATTGTGTGTCCTGCCCGGGGGATGCCGTAGTCCCATaGGCGGCAGTCACAGTTGGA +
Preference number: 4 (lower is better)
Translates to: EPQAATSGKCGDCVSCPGDAVVP*AAVTVG
Trigger: TCCAACTGTGACTGCCGCGCATGGGACTACGGCATC...CCCCGGGCAGGACACACAATCCCCACACTTCCCACTAGTTGCAGCTTGTGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp CTGGCCAGTGCATTTGCAGATTTTTGGAGCTGGGTGATGGGCTCATTCCACTCTAGGGCCTGCAGCACCTaGCAATCCCGGCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: LASAFADFWSWVMGSFHSRACST*QSRHRA
Trigger: CGCCCTGTGCCGGGATTGGCAGGTGCTGCAGGCCCT...AGAGTGGAATGAGCCCATCACCCAGCTCCAAAAATCTGCAAATGCACTGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp CAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATAGGGCCTGCAGCACCTaGCAATCCCGGCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: QRVCLLRPALLGLLERQDRACST*QSRHRA
Trigger: CGCCCTGTGCCGGGATTGGCAGGTGCTGCAGGCCCT...ATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCCACCACCTTCACGATaGAGACCTTCTTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QVVPAQELPVHEGLFCWSPPPSR*RPSWAS
Trigger: GGAGGCCCAAGAAGGTCTGCATCGTGAAGGTGGTGG...GCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTGAGGAGGCCGAGCTaGAGGAGTGAGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGLRRPS*RSEARA
Trigger: CGCCCTGGCCTCACTCCTGCAGCTCGGCCTCCTCAA...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp TCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCATCACTCCGTCTAAAATaGAGTCCCGGAAACGCTCCA +
Preference number: 4 (lower is better)
Translates to: SHLPRGTGHGPGHCGIFPSLRLK*SPGNAP
Trigger: TGGAGCGTTTCCGGGACTGCATTTTAGACGGAGTGA...TGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACTGCGTCTCGTGAGCTGCTTTCCCTaGACACGAACAGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: GTGHGPGHCGIFPEQLRLVSCFP*TRTEAL
Trigger: AAGAGCTTCTGTTCGTGTGCAGGGAAAGCAGCTCAC...GAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGTGCTATGCGAGTGACTaGAAGCAGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGCYASD*KQEAGP
Trigger: TGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCA...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp GCAGTCCCGGAAACGCTCCACGGTCCTCTCCTGCCTCTGCACGCAGGCAGGCAGAGTTTCCTCCGAAAATaGCAAGAGGAAACCTCCACT +
Preference number: 4 (lower is better)
Translates to: AVPETLHGPLLPLHAGRQSFLRK*QEETST
Trigger: AGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACT...CTGCCTGCCTGCGTGCAGAGGCAGGAGAGGACCGTGGAGCGTTTCCGGGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GCCAGGCTGTCCAGAAAAGCTGGTGCCCAAGTTGCTACAAAGTGGTGCCTGCCCGCTGAGGGTGATGGGTaGAGACGTACACCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: ARLSRKAGAQVATKWCLPAEGDG*RRTPVQ
Trigger: CTGGACAGGTGTACGTCTGCACCCATCACCCTCAGC...GGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACTGCGTCTCCCCACAGGGAAGTGTTaGTGCTCTGGCAACATTTCA +
Preference number: 4 (lower is better)
Translates to: GTGHGPGHCGIFPEQLRLPTGKC*CSGNIS
Trigger: TGAAATGTTGCCAGAGCAGCAACACTTCCCTGTGGG...GAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GCCAGGCTGTCCAGAAAAGCTGGTGCCCAAGTTGCTACAAAGTGGTGCCTGCCCGGCTTGGGTGGGTCCTaGCACCTTGCTCACTTGGTA +
Preference number: 4 (lower is better)
Translates to: ARLSRKAGAQVATKWCLPGLGGS*HLAHLV
Trigger: TACCAAGTGAGCAAGGTGGCAGGACCCACCCAAGCC...GGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACTGCGTCTCCAAAGGTACAACAGATaGGACACCATGCAGACACGC +
Preference number: 4 (lower is better)
Translates to: GTGHGPGHCGIFPEQLRLQRYNR*DTMQTR
Trigger: GCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTG...GAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCGAGCCCAGTGCTCCTTaGCCACGCCTCTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: EFVSSDPRSLDFWKDRISEPSAP*PRLCSL
Trigger: CAGGGAGCAGAGGCGTGGGCAAGGAGCACTGGGCTC...GGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490273.5
CDS-3UTR CCA 90 bp GGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGGCGCTGTGCAGAGTGTAAACGAGTCCGAGAACTaGCTGAAGCCGATGAACAGC +
Preference number: 4 (lower is better)
Translates to: GLQEACAVAPAQGAVQSVNESEN*LKPMNS
Trigger: GCTGTTCATCGGCTTCAGCCAGTTCTCGGACTCGTT...TACACTCTGCACAGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CCA 90 bp GAACCACAAGCTGCAACTAGTGGGAAGTGTGGGGATTGTGTGTCCTGCCCGGGGCACCAGAAGTTGGGCTaGTCCAGGAGGAACGAGTCC +
Preference number: 4 (lower is better)
Translates to: EPQAATSGKCGDCVSCPGHQKLG*SRRNES
Trigger: GGACTCGTTCCTCCTGGACCAGCCCAACTTCTGGTG...CCCCGGGCAGGACACACAATCCCCACACTTCCCACTAGTTGCAGCTTGTGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CCA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAATGGCGAAGGGGGTGGTaGGGAGGCTGGTCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: ACARGTFLLEPIWERRNKWRRGW*GGWSSC
Trigger: GCAACTGGACCAGCCTCCCCACCACCCCCTTCGCCA...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CTGGCCAGTGCATTTGCAGATTTTTGGAGCTGGGTGATGGGCTCATTCCACTCTAGGGGATGGCAGGGGTaGTGTGTCGCCTCCGTCCGC +
Preference number: 4 (lower is better)
Translates to: LASAFADFWSWVMGSFHSRGWQG*CVASVR
Trigger: GCGGACGGAGGCGACACACCACCCCTGCCATCCCCT...AGAGTGGAATGAGCCCATCACCCAGCTCCAAAAATCTGCAAATGCACTGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CCA 90 bp GACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCCTGCGCGGCAGTCACAGTTaGAGGCGTTGTCCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: DTDIFPGPRVAPCSPFLLRGSHS*RRCPPC
Trigger: ACAAGGGGGACAACGCCTCCAACTGTGACTGCCGCG...CAGGAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGTTGCTGACCACGTTCTaGACGAGGCCGGCGCGGATG +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLLLTTF*TRPARM
Trigger: CATCCGCGCCGGCCTCGTCCAGAACGTGGTCAGCAA...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCAGGCATGAGGAACTaGCCCGCCATGGCCACGAAG +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLPGMRN*PAMATK
Trigger: CTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCTGG...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp AGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCCTGGCAAAGCAGTGGTaGATCCCGTACCCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: RRSDTDIFPGPRVAPCSPLAKQW*IPYPVS
Trigger: GCTGACGGGGTACGGGATCCACCACTGCTTTGCCAG...GGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp GAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGAACTCCTGGCAAAGCAGTaGTGGATCCCGTACCCCGTC +
Preference number: 4 (lower is better)
Translates to: EAGGHLDSPMRNLRSLPELLAKQ*WIPYPV
Trigger: GACGGGGTACGGGATCCACCACTGCTTTGCCAGGAG...TTCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp CGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGTTGGTGAGCAGCAGTaGCTGCTCCCCCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: REAGGHLDSPMRNLRSLPVGEQQ*LLPLLV
Trigger: CACAAGAAGGGGGAGCAGCCACTGCTGCTCACCAAC...GGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATGGCCTTCATGCCGTTaGCCGTGGCACCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGWPSCR*PWHPRA
Trigger: TGCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCA...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTAGCTGCCCCAGACCCTaGAGCCCCGGGTTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTSCPRP*SPGFRR
Trigger: CCTGCGGAACCCGGGGCTCCAGGGTCTGGGGCAGCT...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGTGGCCCTGGTCACTGTaGCATCTTCCCAGAGCAACT +
Preference number: 4 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGWPWSL*HLPRAT
Trigger: AGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCA...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGCAGAGGGACCGGCCATaGCCCTGGTCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: PALLGLLERQDFPTPVERQRDRP*PWSLWH
Trigger: ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTG...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGACAAGTTGCTACAAAGTaGTGCCTGCCCTTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRQVATK*CLPLPR
Trigger: CCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTG...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCTGGAGGAGACATGAGTaGCGACAGCAAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: QVVPAQELPVHEGLFCWSWRRHE*RQQAAG
Trigger: GCCTGCTGCTTGCTGTCGCCACTCATGTCTCCTCCA...GCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCGCGTGGTCCAGCCACTaGAAACACGTGGCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: QVVPAQELPVHEGLFCWSAWSSH*KHVAKS
Trigger: ACTCTTGGCCACGTGTTTCCAGTGGCTGGACCACGC...GCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GGCATCTTCCCAGAGCAACTGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTTCCCAGGTGTCGGCGTaGTCCAGCCACTGGAAACAC +
Preference number: 4 (lower is better)
Translates to: GIFPEQLRLAAQGGDSICSQVSA*SSHWKH
Trigger: GTGTTTCCAGTGGCTGGACCACGCCGACACCTGGGA...ACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGTCCCAGGTGTCGGCGTaGTCCAGCCACTGGAAACAC +
Preference number: 4 (lower is better)
Translates to: CVSLPREVIPFVISERERSQVSA*SSHWKH
Trigger: GTGTTTCCAGTGGCTGGACCACGCCGACACCTGGGA...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAAACTGCCTACTGGCCTaGCTACTGGATAGGTCCTAT +
Preference number: 4 (lower is better)
Translates to: SHLPRGTGHGPGHCGIFPNCLLA*LLDRSY
Trigger: ATAGGACCTATCCAGTAGCCAGGCCAGTAGGCAGTT...TGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGCCCCCGTCTCTCAGGTaGTCTGAGAGTGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: CVSLPREVIPFVISERERPPSLR*SESGTW
Trigger: CCAAGTGCCACTCTCAGACCACCTGAGAGACGGGGG...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GCCAGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCAAGATCCCACTTGCTaGCCACGTTCTGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: ARRSDTDIFPGPRVAPCSQDPTC*PRSGRG
Trigger: GCCTCGTCCAGAACGTGGTCAGCAAGTGGGATCTTG...GGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR TCA 90 bp CGCACATGGCCAGGCAGGACACCAGCGCGATGCTGGCCGTGGTATAGTAGTCAGTGCGATTCTTCTGTGTaGAGTGGAGGATCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RTWPGRTPARCWPWYSSQCDSSV*SGGSAS
Trigger: AGAGGCTGATCCTCCACTTCACACAGAAGAATCGCA...CTGACTACTATACCACGGCCAGCATCGCGCTGGTGTCCTGCCTGGCCATGTGCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR TCA 90 bp TGCTATGAACGAGCACCGTCAGAGAATTCCCACCCACACGTACAGAAACACAGTGCCGAGCTGCAGGAGTaGGGCCAGGGCGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: CYERAPSENSHPHVQKHSAELQE*GQGGED
Trigger: ATCCTCACCGCCCTGGCCTCACTCCTGCAGCTCGGC...ACTGTGTTTCTGTACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp TTATGGCACTTGCAGTTTGGGATTGCTCATTTGGCTCTAGGAAGCGGTGGTGTCGCCGAGCTGCAGGAGTaGGGCCAGGGCGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LWHLQFGIAHLALGSGGVAELQE*GQGGED
Trigger: ATCCTCACCGCCCTGGCCTCACTCCTGCAGCTCGGC...GACACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGCCGAGCTGCAGGAGTaGGGCCAGGGCGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLAELQE*GQGGED
Trigger: ATCCTCACCGCCCTGGCCTCACTCCTGCAGCTCGGC...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCACTTTCCAATCAGGTTaGGGAGGCCGAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: QVVPAQELPVHEGLFCWSTFQSG*GGRAAG
Trigger: TCCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGT...GCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR TCA 90 bp GACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCCTGGCTGTCACTCATCCCTaGGTCTGGGTGCTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: DTDIFPGPRVAPCSPFLLAVTHP*VWVLAV
Trigger: TACAGCCAGCACCCAGACTCAGGGATGAGTGACAGC...CAGGAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR TCA 90 bp GAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCACAGAAGAACACGCTaGGGCTCCCCACCGCATGGG +
Preference number: 4 (lower is better)
Translates to: EFVSSDPRSLDFWKDRISHRRTR*GSPPHG
Trigger: CCCATGCGGTGGGGAGCCTCAGCGTGTTCTTCTGTG...GGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGGGTTGTGCAGCTCGATaGTGGGTGCCGTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: PALLGLLERQDFPTPVERGCAAR*WVPSAC
Trigger: GCATGCTGACGGCACCCATCATCGAGCTGCACAACC...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTCCCTGGAGTGATGTCTaGGGTGACGGCCATCCAAGC +
Preference number: 4 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPPWSDV*GDGHPS
Trigger: GCTTGGATGGCCGTCACCTCAGACATCACTCCAGGG...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR TCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGTCTCCAGGCCCTTACTaGTGTGTGGACCGCATGTGG +
Preference number: 4 (lower is better)
Translates to: CVSLPREVIPFVISERERSPGPY*CVDRMW
Trigger: CCACATGCGGTCCACACATCAGTAAGGGCCTGGAGA...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTCGGGCCGGGCGGTGTaGCCTCACAGGCCCACTTAT +
Preference number: 4 (lower is better)
Translates to: QRVCLLRPALLGLLERQDSGRAV*PHRPTY
Trigger: ATAAGTGGGCCTGTGAGGTCACACCGCCCGGCCCGA...ATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp TCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCCTGGGGTGTCTCCCATaGCGCACCTTATCACCGTCG +
Preference number: 4 (lower is better)
Translates to: SDTDIFPGPRVAPCSPFLLGCLP*RTLSPS
Trigger: CGACGGTGATAAGGTGCGTCATGGGAGACACCCCAG...GAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR GCA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAACCAGCTCGGTGCCTTTaGCGGCCCCGCGGCACCAGA +
Preference number: 4 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCEPARCL*RPRGTR
Trigger: TCTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGG...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATGTGGTGGTGACCCCTaGCAGCTCGGTGCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGCGGDP*QLGAFA
Trigger: GGCAAAGGCACCGAGCTGGCAGGGGTCACCACCACA...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGGAACCGCGCCGCTGCTGTTaGTCCGGTTGCCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLSRLGCPTSFLRKCQEEPRRCC*SGCPQP
Trigger: AGGCTGCGGGCAACCGGAGCAACAGCAGCGGCGCGG...TTCCTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTAGGGCCTGCAGCACCTaGCAATCCCGGCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTRACST*QSRHRA
Trigger: CGCCCTGTGCCGGGATTGGCAGGTGCTGCAGGCCCT...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGGCCTGCAGCACCTaGCAATCCCGGCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDRACST*QSRHRA
Trigger: CGCCCTGTGCCGGGATTGGCAGGTGCTGCAGGCCCT...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp ACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGCCTCGTGGCCCATCATaGTCCTGGCAAAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: TRAACARGTFLLEPIWERPRGPS*SWQSSG
Trigger: ACCACTGCTTTGCCAGGAGCATGATGGGCCACGAGG...CCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCACCTCGTGGCCCATCATaGTCCTGGCAAAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LLRPALLGLLERQDFPTPPRGPS*SWQSSG
Trigger: ACCACTGCTTTGCCAGGAGCATGATGGGCCACGAGG...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTGCAGCAGCCCTCCCCTaGGCCCGAGGAATCGGACCA +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTAAALP*ARGIGP
Trigger: TGGTCCGATTCCTCGGGCGCAGGGGAGGGCTGCTGC...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCTTGAGGAGGCCGAGCTaGAGGAGTGAGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGLLERQDFLRRPS*RSEARA
Trigger: CGCCCTGGCCTCACTCCTGCAGCTCGGCCTCCTCAA...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTTGGGTGCCGTCAGCATaGCGAAGCCCGCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFWVPSA*RSPRWP
Trigger: TGGCCAGCGCGGGCTTCGGCATGCTGACGGCACCCA...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACATGTGTCACCCGCGGCTaGGGCATCGTGGAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTCVTRG*GIVEAR
Trigger: TCGGGCCTCCACGATGCCGCAGCCGCGGGTGACACA...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCTACATGGCCTTCATaGCGTTGGCCGTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPATWPS*RWPWHP
Trigger: AGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGC...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGGCTACATGGCCTTCATaGCGTTGGCCGTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: PALLGLLERQDFPTPVERATWPS*RWPWHP
Trigger: AGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGC...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp GAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGAATGCCGGCACAAGAGCTaGCTGTGCACGAGGGACTTT +
Preference number: 4 (lower is better)
Translates to: EAGGHLDSPMRNLRSLPECRHKS*LCTRDF
Trigger: AAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCA...TTCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGAGGAATCTCCGCTCCCTaGCCGAAGCCCCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGGISAP*PKPHLC
Trigger: ACAGAGGTGGGGCTTCGGGCAGGGAGCGGAGATTCC...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCAGGAATCTCCGCTCCCTaGCCGAAGCCCCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSGISAP*PKPHLC
Trigger: ACAGAGGTGGGGCTTCGGGCAGGGAGCGGAGATTCC...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCAGTCTGCTTGCCCCTTaGTGTGTCTTTACACATCTC +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPSLLAP*CVFTHL
Trigger: GAGATGTGTAAAGACACAGCAAGGGGCAAGCAGACT...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCACGTGGCCAAGAGTCTaGTTGCCCCTTGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: QVVPAQELPVHEGLFCWSTWPRV*LPLAVS
Trigger: AGACACAGCAAGGGGCAAGCAGACTCTTGGCCACGT...GCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGACACCCACTGGACTCTaGTCCCAAGAGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PALLGLLERQDFPTPVERTPTGL*SQEPRL
Trigger: CAGCCTGGGCTCTTGGGAGCAGAGTCCAGTGGGTGT...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGCTGAGAGCCATTACCTaGCGACCGTCGGCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: CVSLPREVIPFVISERERLRAIT*RPSASQ
Trigger: CTGACTTGCCGACGGTCGGCAGGTAATGGCTCTCAG...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TGCTATGAACGAGCACCGTCAGAGAATTCCCACCCACACGTACAGAAACACAGTCCCGGCGGGCCCAGATaGGTATCAGGCTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CYERAPSENSHPHVQKHSPGGPR*VSGLGG
Trigger: CCCACCCAAGCCTGATACGCATCTGGGCCCGCCGGG...ACTGTGTTTCTGTACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CTGGCCAGTGCATTTGCAGATTTTTGGAGCTGGGTGATGGGCTCATTCCACTCTCTTGTCCGGAGGGGATaGCAGGGGTGGTGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: LASAFADFWSWVMGSFHSLVRRG*QGWCVA
Trigger: GGCGACACACCACCCCTGCCATCCCCTCCGGACAAG...AGAGTGGAATGAGCCCATCACCCAGCTCCAAAAATCTGCAAATGCACTGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CCA 90 bp GAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCTTGCTGACCACGTTCTaGACGAGGCCGGCGCGGATG +
Preference number: 4 (lower is better)
Translates to: EFVSSDPRSLDFWKDRISLLTTF*TRPARM
Trigger: CATCCGCGCCGGCCTCGTCCAGAACGTGGTCAGCAA...GGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp ATCCAGCCTCTGCCTCTGACTACCTTTAAGACCAGGACTCGAAGCAGAGTGAGAGGAACTGGCCCGCCATaGCCACGAAGCTCGCCACCA +
Preference number: 4 (lower is better)
Translates to: IQPLPLTTFKTRTRSRVRGTGPP*PRSSPP
Trigger: TGGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCC...TCTCACTCTGCTTCGAGTCCTGGTCTTAAAGGTAGTCAGAGGCAGAGGCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATGGAACTGGCCCGCCATaGCCACGAAGCTCGCCACCA +
Preference number: 4 (lower is better)
Translates to: QRVCLLRPALLGLLERQDGTGPP*PRSSPP
Trigger: TGGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCC...ATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAACCAGGCATGAGGAACTaGCCCGCCATGGCCACGAAG +
Preference number: 4 (lower is better)
Translates to: ACARGTFLLEPIWERRNKPGMRN*PAMATK
Trigger: CTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCTGG...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp AGGACACCAGCGCGATGCTGGCCGTGGTATAGTAGTCAGCATAGAAGTTCTCCACCAGGCATGAGGAACTaGCCCGCCATGGCCACGAAG +
Preference number: 4 (lower is better)
Translates to: RTPARCWPWYSSQHRSSPPGMRN*PAMATK
Trigger: CTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCTGG...TGGAGAACTTCTATGCTGACTACTATACCACGGCCAGCATCGCGCTGGTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CCA 90 bp GCCAGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCACTCAAACTGCTGGGTaGCCATTAGCCACCGGAGGG +
Preference number: 4 (lower is better)
Translates to: ARRSDTDIFPGPRVAPCSTQTAG*PLATGG
Trigger: CCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGT...GGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp ACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGGCAGACTCAAACTGCTaGGTGGCCATTAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: TRAACARGTFLLEPIWERADSNC*VAISHR
Trigger: CCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGC...CCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp GACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCCTGGCAGACTCAAACTGCTaGGTGGCCATTAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: DTDIFPGPRVAPCSPFLLADSNC*VAISHR
Trigger: CCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGC...CAGGAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp TCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCCTCCTGGCAAAGCAGTaGTGGATCCCGTACCCCGTC +
Preference number: 4 (lower is better)
Translates to: SDTDIFPGPRVAPCSPFLLLAKQ*WIPYPV
Trigger: GACGGGGTACGGGATCCACCACTGCTTTGCCAGGAG...GAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp ACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGGGCCCATCATGCTCCTaGCAAAGCAGTGGTGGATCC +
Preference number: 4 (lower is better)
Translates to: TRAACARGTFLLEPIWERGPSCS*QSSGGS
Trigger: GGATCCACCACTGCTTTGCCAGGAGCATGATGGGCC...CCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCACACCAGCGCGATGCTaGCCGTGGTATAGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: QVVPAQELPVHEGLFCWSTPARC*PWYSSQ
Trigger: CTGACTACTATACCACGGCCAGCATCGCGCTGGTGT...GCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCGCAGGCCGGGCTACATaGCCTTCATGCCGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGLLERQDFAGRAT*PSCRWP
Trigger: CGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGC...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAAAGCTGCCCCAGACCCTaGAGCCCCGGGTTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCESCPRP*SPGFRR
Trigger: CCTGCGGAACCCGGGGCTCCAGGGTCTGGGGCAGCT...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCCGTTAGAAATGTTCTCAGGCAGGTTCTGGTCCCTGCTCTCGGGCAGCAGGAGTTGAGAGGCTCAGCTTaGCTGAGGCAGCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: PVRNVLRQVLVPALGQQELRGSA*LRQLSH
Trigger: GTGGGAAAGCTGCCTCAGCCAAGCTGAGCCTCTCAA...CTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAACATTTCTAACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CCA 90 bp TCGGTTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGACCGGCCATGGCCCTaGTCACTGTGGCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: SVGSHFIVSPRPETTISLDRPWP*SLWHLP
Trigger: GGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTC...CAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAACCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCTTCACCTCGTGGCCCATCATGCTCCTGGCAAAGCAGTGGTGGATCCCGTACCATGCCTTCGAGAGGCTaGAGGTCATTTGGACTCACC +
Preference number: 4 (lower is better)
Translates to: PSPRGPSCSWQSSGGSRTMPSRG*RSFGLT
Trigger: GGTGAGTCCAAATGACCTCCAGCCTCTCGAAGGCAT...GGTACGGGATCCACCACTGCTTTGCCAGGAGCATGATGGGCCACGAGGTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CCA 90 bp GGCATCTTCCCAGAGCAACTGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTAAGTGGACTGCAGGGTaGCCTGGTGCTGAGGGTGAT +
Preference number: 4 (lower is better)
Translates to: GIFPEQLRLAAQGGDSICKWTAG*PGAEGD
Trigger: ATCACCCTCAGCACCAGGCCACCCTGCAGTCCACTT...ACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTAGGACAGCTGTAGTGTaGACCTCCCCCGCACATGCG +
Preference number: 4 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPRTAVV*TSPAHA
Trigger: CGCATGTGCGGGGGAGGTCCACACTACAGCTGTCCT...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CAA 72 bp GCTGGTGCCCAAGTTGCTACAAAGTGGTGCCTGCCCTaGCCAAGGAGGCTGTCTCTTAGTCGCCTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: AGAQVATKWCLP*PRRLSLSRLGC
Trigger: ACACCCAAGGCGACTAAGAGACAGCCTCCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CAA 72 bp GGTCCAGCCACTGGAAACACGTGGCCAAGAGTCTGCTaGCCCCTTGCTGTGTCTTTACACATCTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GPATGNTWPRVC*PLAVSLHISRP
Trigger: GGGCCTGGAGATGTGTAAAGACACAGCAAGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGCTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AGTTTCCTCCGAAAATGCCAAGAGGAAACCTCCACTTTCTGGGGTGAAACGAGGGCGCCGGGATCCAGGTaGGCAGCACGAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SFLRKCQEETSTFWGETRAPGSR*AARGSS
Trigger: AGAAGACCCTCGTGCTGCTCACCTGGATCCCGGCGC...CCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCCTGCTGGTATCACACCCTTaGTGTCGCCCTCAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: DTDIFPGPRVAPCSPFLLLVSHP*CRPQGS
Trigger: TGAACCCTGAGGGCGACATCAAGGGTGTGATACCAG...CAGGAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR TCA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCACTGGTATCACACCCTTaGTGTCGCCCTCAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: LLRPALLGLLERQDFPTPLVSHP*CRPQGS
Trigger: TGAACCCTGAGGGCGACATCAAGGGTGTGATACCAG...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp GCCAGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCACTTTCCAATCAGGTTaGGGAGGCCGAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: ARRSDTDIFPGPRVAPCSTFQSG*GGRAAG
Trigger: TCCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGT...GGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR TCA 90 bp CCCGTTAGAAATGTTCTCAGGCAGGTTCTGGTCCCTGCTCTCGGGCAGCAGGAGTTATCACCGTCGGGGTaGTCTCCGCACAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: PVRNVLRQVLVPALGQQELSPSG*SPHRRT
Trigger: TGTTCTTCTGTGCGGAGATCACCCCGACGGTGATAA...CTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAACATTTCTAACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR TCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGGGCCATCCAAGCTGGTaGTCTTCATGGTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: CVSLPREVIPFVISERERGHPSW*SSWCVL
Trigger: GAGCACACACCATGAAGATCACCAGCTTGGATGGCC...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GGCATCTTCCCAGAGCAACTGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTAGGCAGGGGCAGCGTTaGGCTTTGGTGAGTTATTGC +
Preference number: 4 (lower is better)
Translates to: GIFPEQLRLAAQGGDSICRQGQR*ALVSYC
Trigger: GCAATAACTCACCAAAGCTCAACGCTGCCCCTGCCT...ACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGACTTTTATTGAAAGGCTaGCAGGGTAGGCTAGCGGAA +
Preference number: 4 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRLLLKG*QGRLAE
Trigger: TTCCGCTAGCCTACCCTGTCAGCCTTTCAATAAAAG...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGCTTTTATTGAAAGGCTaGCAGGGTAGGCTAGCGGAA +
Preference number: 4 (lower is better)
Translates to: APPLCYASDCKQEAGPGRLLLKG*QGRLAE
Trigger: TTCCGCTAGCCTACCCTGTCAGCCTTTCAATAAAAG...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AGTTTCCTCCGAAAATGCCAAGAGGAAACCTCCACTTTCTGGGGTGAAACGAGGTCGGGCCGGGCGGTGTaGCCTCACAGGCCCACTTAT +
Preference number: 4 (lower is better)
Translates to: SFLRKCQEETSTFWGETRSGRAV*PHRPTY
Trigger: ATAAGTGGGCCTGTGAGGTCACACCGCCCGGCCCGA...CCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGCGTAAGCTTGTGCTATaGACGAGCACCGTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGRKLVL*TSTVRE
Trigger: TTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACG...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCTGGAAAATTTGTCCTTaGCGCTGTCACTCATCCCTA +
Preference number: 4 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPWKICP*RCHSSL
Trigger: TAGGGATGAGTGACAGCGTCAAGGACAAATTTTCCA...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436008.6
CDS-3UTR TCA 90 bp TCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCCCAGGGACTCGTCTTTaGTTTCCGAGAAGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: SDTDIFPGPRVAPCSPFLPGTRL*FPRSRR
Trigger: ACGCCGGCTTCTCGGAAATCAAAGACGAGTCCCTGG...GAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR TCA 90 bp GCCAGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCGCACTAGCTGTGCCGTaGGGTCTCTTAGCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: ARRSDTDIFPGPRVAPCSALAVP*GLLAEL
Trigger: CAACTCTGCTAAGAGACCTCACGGCACAGCTAGTGC...GGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR TCA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAAGGGTAGGCTGGCTGTaGGACTTTGAAGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLRPALLGLLERQDFPTPRVGWL*DFEEAW
Trigger: CCAGGCTTCTTCAAAGTCTCACAGCCAGCCTACCCT...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490273.5
CDS-3UTR GCA 90 bp GGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGGCGCTGTGCAGAGTGTAACTGGCCAGTGCATTTaGAGATTTTTGGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GLQEACAVAPAQGAVQSVTGQCI*RFLELG
Trigger: ACCCAGCTCCAAAAATCTGCAAATGCACTGGCCAGT...TACACTCTGCACAGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp GTAGTCCTTGAGCTCGGCGTTGGTGAGCAGCAGTGGCTGCTCCCCCTTCTTGTGTTTGCAGACTCAAACTaGTGGGTGGCCATTAGCCAC +
Preference number: 4 (lower is better)
Translates to: VVLELGVGEQQWLLPLLVFADSN*WVAISH
Trigger: GTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAA...CACAAGAAGGGGGAGCAGCCACTGCTGCTCACCAACGCCGAGCTCAAGGACTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR GCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCGCAGGTTCTGGTCCCTaGTCTCGGGCAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGLLERQDFAGSGP*SRAAGG
Trigger: TCCTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGC...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCGTGAGCAGCAGTGGCTaGTCCCCCTTCTTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGLLERQDFVSSSG*SPFLCG
Trigger: GCCGCACAAGAAGGGGGAGCAGCCACTGCTGCTCAC...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp GCCATGTTTTCAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTGCTACATGGCCTTCATaGCGTTGGCCGTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: AMFSSSAGTRAACARGTFATWPS*RWPWHP
Trigger: AGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGC...AAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTGAAAACATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp GCCATGTTTTCAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTTCTTCCCAGAGCAACTaGGTCTCGCTGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: AMFSSSAGTRAACARGTFSSQSN*VSLPRE
Trigger: CTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGA...AAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTGAAAACATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTGTCCTCTCCTGCCTCTaGACGCAGGCAGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTVLSCL*TQAGSL
Trigger: CAGGCTGCCTGCCTGCGTGCAGAGGCAGGAGAGGAC...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTCCACGGTCCTCTCCTaGCTCTGCACGCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTSTVLS*LCTQAG
Trigger: GCCTGCCTGCGTGCAGAGGCAGGAGAGGACCGTGGA...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GGCATCTTCCCAGAGCAACTGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTACGGCGTCTGTGAGCTaGTTTCCCTGCACACGAACA +
Preference number: 4 (lower is better)
Translates to: GIFPEQLRLAAQGGDSICTASVS*FPCTRT
Trigger: TGTTCGTGTGCAGGGAAAGCAGCTCACAGACGCCGT...ACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGCCCCTTCTGTGGATTTaGCTCTGCCATCTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: APPLCYASDCKQEAGPGRPLLWI*LCHLFE
Trigger: CTCAAAAAGATGGCAGAGGCAAATCCACAGAAGGGG...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCATGCTATGCGAGTGACTaGAAGCAGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LLRPALLGLLERQDFPTPCYASD*KQEAGP
Trigger: TGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCA...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp GGCATCTTCCCAGAGCAACTGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGAAGCCCCACCTCTGTaGTATGCGAGTGACTGCAAG +
Preference number: 4 (lower is better)
Translates to: GIFPEQLRLAAQGGDSICEAPPL*YASDCK
Trigger: CTTGCAGTCACTCGCATAGCACAGAGGTGGGGCTTC...ACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGAAGCCCCACCTCTGTaGTATGCGAGTGACTGCAAG +
Preference number: 4 (lower is better)
Translates to: LLRPALLGLLERQDFPTPEAPPL*YASDCK
Trigger: CTTGCAGTCACTCGCATAGCACAGAGGTGGGGCTTC...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp TTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGAAGGTACACCTGTCCAGGTaGAGGCTCAGGGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: LEVTSLSHPGPRPQFPWKVHLSR*RLRGLA
Trigger: AGCGAGGCCCCTGAGCCTGCACCTGGACAGGTGTAC...CTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGGATTTCCCGGGGCTGTaGCCACAGGGAAGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLDFPGL*PQGSVA
Trigger: AGCAACACTTCCCTGTGGGCACAGCCCCGGGAAATC...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAGAGCAACTGCGTCTCCCCACTTATGGCACTTaGAGTTTGGGATTGCTCATT +
Preference number: 4 (lower is better)
Translates to: GTGHGPGHCGIFPEQLRLPTYGT*SLGLLI
Trigger: AATGAGCAATCCCAAACTGCAAGTGCCATAAGTGGG...GAGACGCAGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATTTAATGGTAGTGAAATaGCCTTCGGTGGATACCATC +
Preference number: 4 (lower is better)
Translates to: SRVPSPQRDRPWPWSLWHLMVVK*PSVDTI
Trigger: GATGGTATCCACCGAAGGGCATTTCACTACCATTAA...ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGGGTGGTGGGGAGGCTaGTCCAGTTGCCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLGWWGG*SSCPCP
Trigger: GGGACATGGGCAACTGGACCAGCCTCCCCACCACCC...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CTGGCCAGTGCATTTGCAGATTTTTGGAGCTGGGTGATGGGCTCATTCCACTCTTTGCTGACCACGTTCTaGACGAGGCCGGCGCGGATG +
Preference number: 4 (lower is better)
Translates to: LASAFADFWSWVMGSFHSLLTTF*TRPARM
Trigger: CATCCGCGCCGGCCTCGTCCAGAACGTGGTCAGCAA...AGAGTGGAATGAGCCCATCACCCAGCTCCAAAAATCTGCAAATGCACTGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCAGGCATGAGGAACTaGCCCGCCATGGCCACGAAG +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGLLERQDFPGMRN*PAMATK
Trigger: CTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCTGG...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGACTCAAACTGCTGGGTaGCCATTAGCCACCGGAGGG +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLTQTAG*PLATGG
Trigger: CCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGT...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp GCCAGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCGATGCAGACCTTCTTaGGCCTCCGGGAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: ARRSDTDIFPGPRVAPCSRCRPS*ASGKAL
Trigger: AAGAGCTTTCCCGGAGGCCCAAGAAGGTCTGCATCG...GGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCACTCCTGGCAAAGCAGTaGTGGATCCCGTACCCCGTC +
Preference number: 4 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSLLAKQ*WIPYPV
Trigger: GACGGGGTACGGGATCCACCACTGCTTTGCCAGGAG...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp TCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCGGCCCATCATGCTCCTaGCAAAGCAGTGGTGGATCC +
Preference number: 4 (lower is better)
Translates to: SDTDIFPGPRVAPCSPFLGPSCS*QSSGGS
Trigger: GGATCCACCACTGCTTTGCCAGGAGCATGATGGGCC...GAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTCTCAGGCAGGTTCTaGTCCCTGCTCTCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGFSGRF*SLLSGS
Trigger: GCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAA...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp TCACTCATCCCTGAGTCTGGGTGCTGGCTGTACTTTCCAATCAGGTTGAGGAGGTTCTCAGGCAGGTTCTaGTCCCTGCTCTCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SLIPESGCWLYFPIRLRRFSGRF*SLLSGS
Trigger: GCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAA...CCTCCTCAACCTGATTGGAAAGTACAGCCAGCACCCAGACTCAGGGATGAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTGGCCTTCATGCCGTTaGCCGTGGCACCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTWPSCR*PWHPRA
Trigger: TGCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCA...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp AGTTTCCTCCGAAAATGCCAAGAGGAAACCTCCACTTTCTGGGGTGAAACGAGGTGGCCTTCATGCCGTTaGCCGTGGCACCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: SFLRKCQEETSTFWGETRWPSCR*PWHPRA
Trigger: TGCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCA...CCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTGCAGGCCGGGCTACATaGCCTTCATGCCGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTAGRAT*PSCRWP
Trigger: CGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGC...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCACCGACCCGCGCTCCTTaGACTTTTGGAAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: LLRPALLGLLERQDFPTPPTRAP*TFGKTG
Trigger: TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGG...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp ACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGTGGCCCTGGTCACTGTaGCATCTTCCCAGAGCAACT +
Preference number: 4 (lower is better)
Translates to: TRAACARGTFLLEPIWERWPWSL*HLPRAT
Trigger: AGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCA...CCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGAATGGCCCTGGTCACTGTaGCATCTTCCCAGAGCAACT +
Preference number: 4 (lower is better)
Translates to: EAGGHLDSPMRNLRSLPEWPWSL*HLPRAT
Trigger: AGTTGCTCTGGGAAGATGCCACAGTGACCAGGGCCA...TTCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTTGTGTGCTCAAGGTGTaGGTGACGGGCGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPCVLKV*VTGVCV
Trigger: CACACACACGCCCGTCACCCACACCTTGAGCACACA...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp CGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCATGCCTTCGAGAGGCTaGAGGTCATTTGGACTCACC +
Preference number: 4 (lower is better)
Translates to: REAGGHLDSPMRNLRSLPMPSRG*RSFGLT
Trigger: GGTGAGTCCAAATGACCTCCAGCCTCTCGAAGGCAT...GGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTAAGCAGCAGGCCGGGTaGAAAGCCAGAAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPKQQAG*KARRGE
Trigger: TTCTCCCCTTCTGGCTTTCCACCCGGCCTGCTGCTT...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GGCATCTTCCCAGAGCAACTGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGCCCTTACTGATGTGTaGACCGCATGTGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GIFPEQLRLAAQGGDSICALTDV*TACGGD
Trigger: GTCTCCTCCACATGCGGTCCACACATCAGTAAGGGC...ACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AGTTTCCTCCGAAAATGCCAAGAGGAAACCTCCACTTTCTGGGGTGAAACGAGGGACGGTGCTGGGAAGTaGGCAGCCGTAGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SFLRKCQEETSTFWGETRDGAGK*AAVAAS
Trigger: GGAGGCTGCTACGGCTGCCCACTTCCCAGCACCGTC...CCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGGGCTCTAGGAAGCGGTaGTGTCTGAGTGTGATACTT +
Preference number: 4 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGGSRKR*CLSVIL
Trigger: AAGTATCACACTCAGACACCACCGCTTCCTAGAGCC...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CAA 72 bp AAGAAGCCAGGCTGTCCAGAAAAGCTGGTGCCCAAGTaGCTACAAAGTGGTGCCTGCCCTTGCCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KKPGCPEKLVPK*LQSGACPCQGG
Trigger: GCCTCCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCCTGTTATCACCGTCGGGGTaGTCTCCGCACAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: DTDIFPGPRVAPCSPFLLLSPSG*SPHRRT
Trigger: TGTTCTTCTGTGCGGAGATCACCCCGACGGTGATAA...CAGGAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR TCA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGTCCATTTGTGATCAGTaGGAGGGAGAGGGAATAAAG +
Preference number: 4 (lower is better)
Translates to: APPLCYASDCKQEAGPGRSICDQ*EGEGIK
Trigger: CTTTATTCCCTCTCCCTCTCACTGATCACAAATGGA...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTTCTGTGCTATGCGAGTaGCTGCAAGCAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPSVLCE*LQAGSW
Trigger: CCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGA...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR TCA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGTCTTTCAATTTGTCTTaGTGCCTTCGAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: APPLCYASDCKQEAGPGRSFNLS*CLREAG
Trigger: TCCAGCCTCTCGAAGGCATCAAGACAAATTGAAAGA...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR TCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCACATGTGGAGGAGACATaGGTGGCGACAGCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSHVEET*VATASS
Trigger: GCTGCTTGCTGTCGCCACTCATGTCTCCTCCACATG...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp TCGGTTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGCATGTGGAGGAGACATaGGTGGCGACAGCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SVGSHFIVSPRPETTISLHVEET*VATASS
Trigger: GCTGCTTGCTGTCGCCACTCATGTCTCCTCCACATG...CAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAACCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCAGTGGGAGGGTCAAGTTaGAACAGTGGGTGCCTGCGA +
Preference number: 4 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSVGGSS*NSGCLR
Trigger: TCGCAGGCACCCACTGTTTCAACTTGACCCTCCCAC...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGGCAGACACGCAGCTGTaGACGACAGTTCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: CVSLPREVIPFVISERERADTQL*TTVQNS
Trigger: TGAGTTCTGAACTGTCGTTCACAGCTGCGTGTCTGC...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GCCAGGCTGTCCAGAAAAGCTGGTGCCCAAGTTGCTACAAAGTGGTGCCTGCCCGTGGATACCATCAGGTaGGGTAGGGAAGACATTCCA +
Preference number: 4 (lower is better)
Translates to: ARLSRKAGAQVATKWCLPVDTIR*GREDIP
Trigger: TGGAATGTCTTCCCTACCTCACCTGATGGTATCCAC...GGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGGACTCGAAGCAGAGTaGGAGGCCTCCCTCCACCCA +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLGLEAE*EASLHP
Trigger: TGGGTGGAGGGAGGCCTCTCACTCTGCTTCGAGTCC...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCATCCAGCCTCTGCCTCTaGCTACCTTTAAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: LLRPALLGLLERQDFPTPSSLCL*LPLRPG
Trigger: TCCTGGTCTTAAAGGTAGTCAGAGGCAGAGGCTGGA...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCCAGCCACCTCAGCTATaGACCACGAAGCTGATGTGT +
Preference number: 4 (lower is better)
Translates to: RRSDTDIFPGPRVAPCSPQPPQL*TTKLMC
Trigger: ACACATCAGCTTCGTGGTTCATAGCTGAGGTGGCTG...GGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR GCA 90 bp TACATACAAATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCACTCCGTCCGCGCCGCTaGTGTTGCTCCGGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: YIQIFPKGTTDATPCRHALRPRR*CCSGCP
Trigger: CGGGCAACCGGAGCAACAGCAGCGGCGCGGACGGAG...TGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATTTGTATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CGGAGGATTTTATTACTCACCATTAATGGTAGTGAAATGCCCTTCGGTGGATACCGAGGCCGGCGCGGATaGCGTAGTCCCATGCGCGGC +
Preference number: 4 (lower is better)
Translates to: RRILLLTINGSEMPFGGYRGRRG*RSPMRG
Trigger: GCCGCGCATGGGACTACGGCATCCGCGCCGGCCTCG...GTATCCACCGAAGGGCATTTCACTACCATTAATGGTGAGTAATAAAATCCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCGAGGATCAGCCTCTTTaGAGACTCAAACTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: QVVPAQELPVHEGLFCWSEDQPL*RLKLLG
Trigger: ACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTC...GCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp GAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCTCGTGGCCCATCATaGTCCTGGCAAAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: EFVSSDPRSLDFWKDRISPRGPS*SWQSSG
Trigger: ACCACTGCTTTGCCAGGAGCATGATGGGCCACGAGG...GGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCACATGGGAGGCAAACATaGCCACGATGGAAAACGCGA +
Preference number: 4 (lower is better)
Translates to: LLRPALLGLLERQDFPTPHGRQT*PRWKTR
Trigger: TCGCGTTTTCCATCGTGGGCATGTTTGCCTCCCATG...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp CAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATCAGCTCGATGATGGGTaGCGTCAGCATGCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: QRVCLLRPALLGLLERQDQLDDG*RQHAEA
Trigger: GGCTTCGGCATGCTGACGGCACCCATCATCGAGCTG...ATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCAGCTCGATGATGGGTaGCGTCAGCATGCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGLLERQDFQLDDG*RQHAEA
Trigger: GGCTTCGGCATGCTGACGGCACCCATCATCGAGCTG...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGCAGGTTCTGGTCCCTaGTCTCGGGCAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTAGSGP*SRAAGG
Trigger: TCCTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGC...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp TTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGAAGTCTTCCCAGAGCAACTaGGTCTCGCTGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LEVTSLSHPGPRPQFPWKSSQSN*VSLPRE
Trigger: CTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGA...CTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TCTGTAGCCAAACCAATTTACCAGCCCGTCTTCCAGATGCAGGTGATCTTACTCGTCCTCTCCTGCCTCTaGACGCAGGCAGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SVAKPIYQPVFQMQVILLVLSCL*TQAGSL
Trigger: CAGGCTGCCTGCCTGCGTGCAGAGGCAGGAGAGGAC...GAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGTGAGCTGCTTTCCCTaGACACGAACAGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: REAGGHLDSPMRNLRSLPVSCFP*TRTEAL
Trigger: AAGAGCTTCTGTTCGTGTGCAGGGAAAGCAGCTCAC...GGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGACGGCGTCTGTGAGCTaGTTTCCCTGCACACGAACA +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLTASVS*FPCTRT
Trigger: TGTTCGTGTGCAGGGAAAGCAGCTCACAGACGCCGT...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp GAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGAACACGAGGGACTTTTCTaGTGGAGCCAATCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: EAGGHLDSPMRNLRSLPEHEGLF*WSQSGR
Trigger: TCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTG...TTCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGGAAGCCCCACCTCTGTaGTATGCGAGTGACTGCAAG +
Preference number: 4 (lower is better)
Translates to: PALLGLLERQDFPTPVEREAPPL*YASDCK
Trigger: CTTGCAGTCACTCGCATAGCACAGAGGTGGGGCTTC...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGTTGGCACGCAAAGGCTaGACAGATCTAAAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGLARKG*TDLKKG
Trigger: GCCTTTCTTTAGATCTGTGCAGCCTTTGCGTGCCAA...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp ATCCAGCCTCTGCCTCTGACTACCTTTAAGACCAGGACTCGAAGCAGAGTGAGACCCACCTTCCCCAACTaGCTACTGGCCTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: IQPLPLTTFKTRTRSRVRPTFPN*LLAWLL
Trigger: CAGTAGCCAGGCCAGTAGGCAGTTGGGGAAGGTGGG...TCTCACTCTGCTTCGAGTCCTGGTCTTAAAGGTAGTCAGAGGCAGAGGCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGCCAGAAGAGTGTGAGTaGTGTCCCTTGCCACCAACT +
Preference number: 4 (lower is better)
Translates to: CVSLPREVIPFVISERERPEECE*CPLPPT
Trigger: AGTTGGTGGCAAGGGACAGCACTCACACTCTTCTGG...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAACTGAGAGCCATTACCTaGCGACCGTCGGCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: ACARGTFLLEPIWERRNKLRAIT*RPSASQ
Trigger: CTGACTTGCCGACGGTCGGCAGGTAATGGCTCTCAG...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGACAGATGCGACACCATaGAGACACGCAGCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: CVSLPREVIPFVISERERTDATP*RHAAVN
Trigger: GTTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGT...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCAGGTTCTGGTGGAAGTaGGGCATAAGTGATCCGCTG +
Preference number: 4 (lower is better)
Translates to: RRSDTDIFPGPRVAPCSPRFWWK*GISDPL
Trigger: CAGCGGATCACTTATGCCGCACTTCCACCAGAACCT...GGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACCGCGGCACCAGAAGTTaGGCTGGTCCAGGAGGAACG +
Preference number: 4 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDRGTRS*AGPGGT
Trigger: CGTTCCTCCTGGACCAGCCCAACTTCTGGTGCCGCG...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CTGGCCAGTGCATTTGCAGATTTTTGGAGCTGGGTGATGGGCTCATTCCACTCTCGCGGCAGTCACAGTTaGAGGCGTTGTCCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: LASAFADFWSWVMGSFHSRGSHS*RRCPPC
Trigger: ACAAGGGGGACAACGCCTCCAACTGTGACTGCCGCG...AGAGTGGAATGAGCCCATCACCCAGCTCCAAAAATCTGCAAATGCACTGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CCA 90 bp CCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTCAGAGAACTTAGCGATATaGACCTTCCAGGCATTATCA +
Preference number: 4 (lower is better)
Translates to: PGSHCLLGASGLGPTATSENLAI*TFQALS
Trigger: TGATAATGCCTGGAAGGTCCATATCGCTAAGTTCTC...TGAGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp ATCTCAGGTCTCGACGCATCTGTTAGCTGTGTACTCACAAAGCTGTGGCGATATGGAACTGGCCCGCCATaGCCACGAAGCTCGCCACCA +
Preference number: 4 (lower is better)
Translates to: ISGLDASVSCVLTKLWRYGTGPP*PRSSPP
Trigger: TGGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCC...ATATCGCCACAGCTTTGTGAGTACACAGCTAACAGATGCGTCGAGACCTGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp TCACTCATCCCTGAGTCTGGGTGCTGGCTGTACTTTCCAATCAGGTTGAGGAGGGCAGACTCAAACTGCTaGGTGGCCATTAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: SLIPESGCWLYFPIRLRRADSNC*VAISHR
Trigger: CCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGC...CCTCCTCAACCTGATTGGAAAGTACAGCCAGCACCCAGACTCAGGGATGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CCA 90 bp CAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATCTGGCAAAGCAGTGGTaGATCCCGTACCCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: QRVCLLRPALLGLLERQDLAKQW*IPYPVS
Trigger: GCTGACGGGGTACGGGATCCACCACTGCTTTGCCAG...ATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATCTCCTGGCAAAGCAGTaGTGGATCCCGTACCCCGTC +
Preference number: 4 (lower is better)
Translates to: QRVCLLRPALLGLLERQDLLAKQ*WIPYPV
Trigger: GACGGGGTACGGGATCCACCACTGCTTTGCCAGGAG...ATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCAGGCCCATCATGCTCCTaGCAAAGCAGTGGTGGATCC +
Preference number: 4 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSGPSCS*QSSGGS
Trigger: GGATCCACCACTGCTTTGCCAGGAGCATGATGGGCC...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGAGGCCCATCATGCTCCTaGCAAAGCAGTGGTGGATCC +
Preference number: 4 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGGPSCS*QSSGGS
Trigger: GGATCCACCACTGCTTTGCCAGGAGCATGATGGGCC...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp ACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGGCGCGATGCTGGCCGTaGTATAGTAGTCAGCATAGA +
Preference number: 4 (lower is better)
Translates to: TRAACARGTFLLEPIWERARCWP*YSSQHR
Trigger: TCTATGCTGACTACTATACCACGGCCAGCATCGCGC...CCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGGCGCGATGCTGGCCGTaGTATAGTAGTCAGCATAGA +
Preference number: 4 (lower is better)
Translates to: CVSLPREVIPFVISERERARCWP*YSSQHR
Trigger: TCTATGCTGACTACTATACCACGGCCAGCATCGCGC...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCACACCAGCGCGATGCTaGCCGTGGTATAGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: SDTDIFPGPRVAPCSPFLTPARC*PWYSSQ
Trigger: CTGACTACTATACCACGGCCAGCATCGCGCTGGTGT...GAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp GCCATGTTTTCAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTGTTGGTGAGCAGCAGTaGCTGCTCCCCCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: AMFSSSAGTRAACARGTFVGEQQ*LLPLLV
Trigger: CACAAGAAGGGGGAGCAGCCACTGCTGCTCACCAAC...AAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTGAAAACATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp CACGCAGCTGTGAACGACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGATCATGCCGTTGGCCGTaGCACCCTCGGGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: HAAVNDSSELSVSLCYERSCRWP*HPRAVC
Trigger: ACACACTGCCCGAGGGTGCCACGGCCAACGGCATGA...TCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTCGTTCACAGCTGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACATCATGCCGTTGGCCGTaGCACCCTCGGGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTSCRWP*HPRAVC
Trigger: ACACACTGCCCGAGGGTGCCACGGCCAACGGCATGA...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTTTGAGAGGCTCAGCTTaGCTGAGGCAGCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPLRGSA*LRQLSH
Trigger: GTGGGAAAGCTGCCTCAGCCAAGCTGAGCCTCTCAA...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACCAGAGGGACCGGCCATaGCCCTGGTCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDQRDRP*PWSLWH
Trigger: ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTG...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATGTGTGCTCAAGGTGTaGGTGACGGGCGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGCVLKV*VTGVCV
Trigger: CACACACACGCCCGTCACCCACACCTTGAGCACACA...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGTGTGTGGACCGCATGTaGAGGAGACATGAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLCVDRM*RRHEWR
Trigger: TCGCCACTCATGTCTCCTCCACATGCGGTCCACACA...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCAGCGTGGTCCAGCCACTaGAAACACGTGGCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSAWSSH*KHVAKS
Trigger: ACTCTTGGCCACGTGTTTCCAGTGGCTGGACCACGC...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGAGCACCGTCAGAGAATGAGGCAGGGAGAGGCTaGCCAGACAGCCTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: DSSELSVSLCYERAPSENEAGRG*PDSLPS
Trigger: GGAAGGGAGGCTGTCTGGCCAGCCTCTCCCTGCCTC...ATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp ACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGACACAGTACAGTAAGTaGACTGCAGGGTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: TRAACARGTFLLEPIWERTQYSK*TAGWPG
Trigger: ACCAGGCCACCCTGCAGTCCACTTACTGTACTGTGT...CCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATTATTGTCATTTGAGGTaGAGATCAGAGATCATGACC +
Preference number: 4 (lower is better)
Translates to: SRVPSPQRDRPWPWSLWHYCHLR*RSEIMT
Trigger: GGTCATGATCTCTGATCTCCACCTCAAATGACAATA...ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGAAGTCAAGTTGAAACAGTaGGTGCCTGCGAAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: EAGGHLDSPMRNLRSLPEVKLKQ*VPAKGL
Trigger: GAGACCCTTCGCAGGCACCCACTGTTTCAACTTGAC...TTCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGATGGCACTTGCAGTTTaGGATTGCTCATTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: APPLCYASDCKQEAGPGRMALAV*DCSFGS
Trigger: AGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCAT...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCAATCCCACACCAGCCTaGAGCCAGGGACTCGTCTTT +
Preference number: 4 (lower is better)
Translates to: SDTDIFPGPRVAPCSPFLNPTPA*SQGLVF
Trigger: AAAGACGAGTCCCTGGCTCCAGGCTGGTGTGGGATT...GAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp GACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCCTGTGGCAGCACAGGTTCTaGTGGAAGTGCGGCATAAGT +
Preference number: 4 (lower is better)
Translates to: DTDIFPGPRVAPCSPFLLWQHRF*WKCGIS
Trigger: ACTTATGCCGCACTTCCACCAGAACCTGTGCTGCCA...CAGGAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485307.5
3UTR CAA 72 bp GCCTGCCCTTGCCAAGGAGGCTGTCTCTTAGTCGCCTaGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: ACPCQGGCLLVA*GVLQVSSENAK
Trigger: CTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGACAGCCTCCTTGGCAAGGGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGTCATCGGTTTCTGGGTaGAGGCGGCAGACACCTGGC +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLSSVSG*RRQTPG
Trigger: GCCAGGTGTCTGCCGCCTTCACCCAGAAACCGATGA...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGTGCGATTCTTCTGTGTaGAGTGGAGGATCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: CVSLPREVIPFVISERERCDSSV*SGGSAS
Trigger: AGAGGCTGATCCTCCACTTCACACAGAAGAATCGCA...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAACTGGTATCACACCCTTaGTGTCGCCCTCAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: ACARGTFLLEPIWERRNKLVSHP*CRPQGS
Trigger: TGAACCCTGAGGGCGACATCAAGGGTGTGATACCAG...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR TCA 90 bp GAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCACTTTCCAATCAGGTTaGGGAGGCCGAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: EFVSSDPRSLDFWKDRISTFQSG*GGRAAG
Trigger: TCCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGT...GGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAACACAGAAGAACACGCTaGGGCTCCCCACCGCATGGG +
Preference number: 4 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCEHRRTR*GSPPHG
Trigger: CCCATGCGGTGGGGAGCCTCAGCGTGTTCTTCTGTG...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGGTTGTGCAGCTCGATaGTGGGTGCCGTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLGCAAR*WVPSAC
Trigger: GCATGCTGACGGCACCCATCATCGAGCTGCACAACC...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAAGGCCATCCAAGCTGGTaGTCTTCATGGTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ACARGTFLLEPIWERRNKGHPSW*SSWCVL
Trigger: GAGCACACACCATGAAGATCACCAGCTTGGATGGCC...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR TCA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATCTGTGCTATGCGAGTaGCTGCAAGCAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGSVLCE*LQAGSW
Trigger: CCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGA...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR TCA 90 bp TCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAAGCGTTGAGCTTTGGTaGGTTATTGCTTTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: SHLPRGTGHGPGHCGIFPSVELW*VIAFFQ
Trigger: TTGAAAGAAAGCAATAACTCACCAAAGCTCAACGCT...TGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCAAGGCAGGGGCAGCGTTaGGCTTTGGTGAGTTATTGC +
Preference number: 4 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSRQGQR*ALVSYC
Trigger: GCAATAACTCACCAAAGCTCAACGCTGCCCCTGCCT...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR TCA 90 bp AGTTTCCTCCGAAAATGCCAAGAGGAAACCTCCACTTTCTGGGGTGAAACGAGGCCACCTCGGGGCGAGTaGAGACACAGCTTACAGAGG +
Preference number: 4 (lower is better)
Translates to: SFLRKCQEETSTFWGETRPPRGE*RHSLQR
Trigger: CCTCTGTAAGCTGTGTCTTCACTCGCCCCGAGGTGG...CCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGGTCTCTCAGGTGGTCTaGGAGTGGCACTTGGTAAAC +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLVSQVV*EWHLVN
Trigger: GTTTACCAAGTGCCACTCTCAGACCACCTGAGAGAC...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTATGAACCACGAAGCTaGTGTGTCCAGAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RRSDTDIFPGPRVAPCSPYEPRS*CVQSQR
Trigger: TCTCTGGCTCTGGACACATCAGCTTCGTGGTTCATA...GGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR GCA 90 bp CCCACACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGATGCTGTTGCTCCGGTTaGCCGCAGCCTCCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PTRTETQFLYYNLKDREGCCCSG*PQPPRG
Trigger: CCCCCTGGGAGGCTGCGGGCAACCGGAGCAACAGCA...TCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTTGCAGACTCAAACTaGTGGGTGGCCATTAGCCAC +
Preference number: 4 (lower is better)
Translates to: RRSDTDIFPGPRVAPCSPFADSN*WVAISH
Trigger: GTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAA...GGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR GCA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCATTTGCAGACTCAAACTaGTGGGTGGCCATTAGCCAC +
Preference number: 4 (lower is better)
Translates to: LLRPALLGLLERQDFPTPFADSN*WVAISH
Trigger: GTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAA...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp AGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCGAGGATCAGCCTCTTTaGAGACTCAAACTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: RRSDTDIFPGPRVAPCSPEDQPL*RLKLLG
Trigger: ACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTC...GGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR GCA 90 bp ACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGGAGGATCAGCCTCTTTaGAGACTCAAACTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: TRAACARGTFLLEPIWEREDQPL*RLKLLG
Trigger: ACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTC...CCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp CAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATCCACCACCTTCACGATaGAGACCTTCTTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QRVCLLRPALLGLLERQDPPPSR*RPSWAS
Trigger: GGAGGCCCAAGAAGGTCTGCATCGTGAAGGTGGTGG...ATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp TCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCCATGGGAGGCAAACATaGCCACGATGGAAAACGCGA +
Preference number: 4 (lower is better)
Translates to: SDTDIFPGPRVAPCSPFLHGRQT*PRWKTR
Trigger: TCGCGTTTTCCATCGTGGGCATGTTTGCCTCCCATG...GAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR GCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCTGGTCTGTAAACCTGTaGCCAAGCTGCCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGLLERQDFWSVNL*PSCPRP
Trigger: GGGTCTGGGGCAGCTTGGGCACAGGTTTACAGACCA...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAATGCTATGCGAGTGACTaGAAGCAGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ACARGTFLLEPIWERRNKCYASD*KQEAGP
Trigger: TGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCA...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCGTCCAGAAAAGCTGGTaGCCAAGTTGCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: QVVPAQELPVHEGLFCWSVQKSW*PSCYKV
Trigger: CACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGAC...GCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCAGTCTGCTTGCCCCTTaGTGTGTCTTTACACATCTC +
Preference number: 4 (lower is better)
Translates to: QVVPAQELPVHEGLFCWSSLLAP*CVFTHL
Trigger: GAGATGTGTAAAGACACAGCAAGGGGCAAGCAGACT...GCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGCCCACCTTCCCCAACTaGCTACTGGCCTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLPTFPN*LLAWLL
Trigger: CAGTAGCCAGGCCAGTAGGCAGTTGGGGAAGGTGGG...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGACACCCACTGGACTCTaGTCCCAAGAGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLTPTGL*SQEPRL
Trigger: CAGCCTGGGCTCTTGGGAGCAGAGTCCAGTGGGTGT...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAAAGCGTGACAGACGGTaGTGGGAAGTGGGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTKRDRR*WEVGSR
Trigger: ACGGCTGCCCACTTCCCAGCACCGTCTGTCACGCTT...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAAGCGTGACAGACGGTaGTGGGAAGTGGGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDKRDRR*WEVGSR
Trigger: ACGGCTGCCCACTTCCCAGCACCGTCTGTCACGCTT...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGAACGGCCAACTTCAGCTaGAGTTCTGAGTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGTANFS*SSESGC
Trigger: GCACCCAGACTCAGAACTGCAGCTGAAGTTGGCCGT...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436008.6
CDS-3UTR CCA 90 bp TCTGTAGCCAAACCAATTTACCAGCCCGTCTTCCAGATGCAGGTGATCTTACTCCGCGGCACCAGAAGTTaGGCTGGTCCAGGAGGAACG +
Preference number: 4 (lower is better)
Translates to: SVAKPIYQPVFQMQVILLRGTRS*AGPGGT
Trigger: CGTTCCTCCTGGACCAGCCCAACTTCTGGTGCCGCG...GAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGGAGAACTTAGCGATATaGACCTTCCAGGCATTATCA +
Preference number: 4 (lower is better)
Translates to: APPLCYASDCKQEAGPGRENLAI*TFQALS
Trigger: TGATAATGCCTGGAAGGTCCATATCGCTAAGTTCTC...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGAACATCATCGGTTTCTaGGTGAAGGCGGCAGACACC +
Preference number: 4 (lower is better)
Translates to: PALLGLLERQDFPTPVERNIIGF*VKAADT
Trigger: GGTGTCTGCCGCCTTCACCCAGAAACCGATGATGTT...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGACGATGCAGACCTTCTTaGGCCTCCGGGAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGRCRPS*ASGKAL
Trigger: AAGAGCTTTCCCGGAGGCCCAAGAAGGTCTGCATCG...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp AGTTTCCTCCGAAAATGCCAAGAGGAAACCTCCACTTTCTGGGGTGAAACGAGGCTGGCAAAGCAGTGGTaGATCCCGTACCCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: SFLRKCQEETSTFWGETRLAKQW*IPYPVS
Trigger: GCTGACGGGGTACGGGATCCACCACTGCTTTGCCAG...CCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGGCGCGATGCTGGCCGTaGTATAGTAGTCAGCATAGA +
Preference number: 4 (lower is better)
Translates to: PALLGLLERQDFPTPVERARCWP*YSSQHR
Trigger: TCTATGCTGACTACTATACCACGGCCAGCATCGCGC...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCGTTGGTGAGCAGCAGTaGCTGCTCCCCCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGLLERQDFVGEQQ*LLPLLV
Trigger: CACAAGAAGGGGGAGCAGCCACTGCTGCTCACCAAC...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATGCGTGTTCGGTCCCTaGTCTGTAAACCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGCVFGP*SVNLCP
Trigger: TGGGCACAGGTTTACAGACCAGGGACCGAACACGCA...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp GACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGAGCACCGTCAGAGAATGACCGGCCATGGCCCTaGTCACTGTGGCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: DSSELSVSLCYERAPSENDRPWP*SLWHLP
Trigger: GGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTC...ATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GCCAGGCTGTCCAGAAAAGCTGGTGCCCAAGTTGCTACAAAGTGGTGCCTGCCCCTGCTGGAGCCAATCTaGGAGAGGAGGAATAAAAAC +
Preference number: 4 (lower is better)
Translates to: ARLSRKAGAQVATKWCLPLLEPI*ERRNKN
Trigger: GTTTTTATTCCTCCTCTCCCAGATTGGCTCCAGCAG...GGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGAGACAGCCTCCCTTCCTaGGTATCTCAAGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGDSLPS*VSQDPR
Trigger: CCTGGGATCTTGAGATACCCAGGAAGGGAGGCTGTC...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCGTATCAGGCTTGGGTaGGTCCTGCCACCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGLLERQDFRIRLG*VLPPCS
Trigger: TGAGCAAGGTGGCAGGACCCACCCAAGCCTGATACG...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GGCATCTTCCCAGAGCAACTGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGGCTCTAGGAAGCGGTaGTGTCTGAGTGTGATACTT +
Preference number: 4 (lower is better)
Translates to: GIFPEQLRLAAQGGDSICGSRKR*CLSVIL
Trigger: AAGTATCACACTCAGACACCACCGCTTCCTAGAGCC...ACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAAGGACAGCTGTAGTGTaGACCTCCCCCGCACATGCG +
Preference number: 4 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTRTAVV*TSPAHA
Trigger: CGCATGTGCGGGGGAGGTCCACACTACAGCTGTCCT...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCCTGCAGCACAGGTTCTGGTaGAAGTGCGGCATAAGTGAT +
Preference number: 4 (lower is better)
Translates to: DTDIFPGPRVAPCSPFLLQHRFW*KCGISD
Trigger: ATCACTTATGCCGCACTTCCACCAGAACCTGTGCTG...CAGGAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485307.5
3UTR CAA 72 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTaGGAAAGACAGGATTTCCCCACACCAGTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGL*ERQDFPTPVER
Trigger: CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR CAA 72 bp TACCGGATTTCCCGGGGCTGTGCCCACAGGGAAGTGTaGCTGCTCTGGCAACATTTCATAAAGGTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: YRISRGCAHREV*LLWQHFIKVLL
Trigger: GAGCAACACCTTTATGAAATGTTGCCAGAGCAGCAACACTTCCCTGTGGGCACAGCCCCGGGAAATCCGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACCAAGATCCCACTTGCTaGCCACGTTCTGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDQDPTC*PRSGRG
Trigger: GCCTCGTCCAGAACGTGGTCAGCAAGTGGGATCTTG...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGCTGTCACTCATCCCTaGGTCTGGGTGCTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTAVTHP*VWVLAV
Trigger: TACAGCCAGCACCCAGACTCAGGGATGAGTGACAGC...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp TCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGGAAGGTTGTGCAGCTCGATaGTGGGTGCCGTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: SLSRLGCPTSFLRKCQEEGCAAR*WVPSAC
Trigger: GCATGCTGACGGCACCCATCATCGAGCTGCACAACC...TTCCTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GGCATCTTCCCAGAGCAACTGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTAGTTTACACGACCAGTaGGACTGCTCGCAACTTTCA +
Preference number: 4 (lower is better)
Translates to: GIFPEQLRLAAQGGDSICSLHDQ*DCSQLS
Trigger: TGAAAGTTGCGAGCAGTCTCACTGGTCGTGTAAACT...ACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp ACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGATTAGTCCTGATGGCTaGAGTGCTGAGCAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: TRAACARGTFLLEPIWERISPDG*SAEQCL
Trigger: AAGACACTGCTCAGCACTTCAGCCATCAGGACTAAT...CCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp TCGGTTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGCAGACACGCAGCTGTaGACGACAGTTCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: SVGSHFIVSPRPETTISLADTQL*TTVQNS
Trigger: TGAGTTCTGAACTGTCGTTCACAGCTGCGTGTCTGC...CAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCTGTTCCTCTGCTGAGTaGACGCTGGCTCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGLLERQDFCSSAE*TLAPST
Trigger: TGTGGAAGGAGCCAGCGTTCACTCAGCAGAGGAACA...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490273.5
CDS-3UTR TCA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACTCCCTGGATCTTCACTaGGAGCCTGCGGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDSLDLH*EPAAGK
Trigger: CTTTCCTGCCGCAGGCTCTCAGTGAAGATCCAGGGA...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490273.5
CDS-3UTR GCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGATGCCGTAGTCCCATaGGCGGCAGTCACAGTTGGA +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLDAVVP*AAVTVG
Trigger: TCCAACTGTGACTGCCGCGCATGGGACTACGGCATC...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGGCGCTGTGCAGAGTGTAAGACCTCCACCTCCCTaGAATCCATTCATAAAAATT +
Preference number: 4 (lower is better)
Translates to: GLQEACAVAPAQGAVQSVRPPPP*NPFIKI
Trigger: AATTTTTATGAATGGATTGCAGGGAGGTGGAGGTCT...TACACTCTGCACAGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR GCA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGGAGGATCAGCCTCTTTaGAGACTCAAACTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PALLGLLERQDFPTPVEREDQPL*RLKLLG
Trigger: ACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTC...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp CAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATAGGACACCAGCGCGATaGTGGCCGTGGTATAGTAGT +
Preference number: 4 (lower is better)
Translates to: QRVCLLRPALLGLLERQDRTPAR*WPWYSS
Trigger: ACTACTATACCACGGCCAGCATCGCGCTGGTGTCCT...ATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp GAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCATGGGAGGCAAACATaGCCACGATGGAAAACGCGA +
Preference number: 4 (lower is better)
Translates to: EFVSSDPRSLDFWKDRISHGRQT*PRWKTR
Trigger: TCGCGTTTTCCATCGTGGGCATGTTTGCCTCCCATG...GGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp CTCACAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTGTGTCACCCGCGGCTaGGGCATCGTGGAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: LTKLWRYDCCSIKISGEMCVTRG*GIVEAR
Trigger: TCGGGCCTCCACGATGCCGCAGCCGCGGGTGACACA...CATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAAGCTACATGGCCTTCATaGCGTTGGCCGTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCEATWPS*RWPWHP
Trigger: AGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGC...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTTGGTCTGTAAACCTGTaGCCAAGCTGCCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFWSVNL*PSCPRP
Trigger: GGGTCTGGGGCAGCTTGGGCACAGGTTTACAGACCA...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp AGTGAGACTGCTCGCAACTTTCATCACTTAGCATATCCTTCCACAACACAGTACGTCCTCTCCTGCCTCTaGACGCAGGCAGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SETARNFHHLAYPSTTQYVLSCL*TQAGSL
Trigger: CAGGCTGCCTGCCTGCGTGCAGAGGCAGGAGAGGAC...GTACTGTGTTGTGGAAGGATATGCTAAGTGATGAAAGTTGCGAGCAGTCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCACACGAGGGACTTTTCTaGTGGAGCCAATCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSHEGLF*WSQSGR
Trigger: TCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTG...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp GATGATGTGGTGCAGGAAGTAGCCTTTCTGGTTGTGCAGCTCGATGATGGGTGCCACGAGGGACTTTTCTaGTGGAGCCAATCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: DDVVQEVAFLVVQLDDGCHEGLF*WSQSGR
Trigger: TCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTG...GCACCCATCATCGAGCTGCACAACCAGAAAGGCTACTTCCTGCACCACATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR GCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTGCCGGCACAAGAGCTaGCTGTGCACGAGGGACTTT +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTCRHKS*LCTRDF
Trigger: AAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCA...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp ATCCAGCCTCTGCCTCTGACTACCTTTAAGACCAGGACTCGAAGCAGAGTGAGACTACAAAGTGGTGCCTaGCCTTGCCAAGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: IQPLPLTTFKTRTRSRVRLQSGA*PCQGGC
Trigger: ACAGCCTCCTTGGCAAGGGCAGGCACCACTTTGTAG...TCTCACTCTGCTTCGAGTCCTGGTCTTAAAGGTAGTCAGAGGCAGAGGCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTGCTGAGGGTGATGGGTaGAGACGTACACCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTAEGDG*RRTPVQ
Trigger: CTGGACAGGTGTACGTCTGCACCCATCACCCTCAGC...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GCCAGGCTGTCCAGAAAAGCTGGTGCCCAAGTTGCTACAAAGTGGTGCCTGCCCCATGACACACCATACTaGTTTTCCAAAACACACGGG +
Preference number: 4 (lower is better)
Translates to: ARLSRKAGAQVATKWCLPHDTPY*FSKTHG
Trigger: CCCGTGTGTTTTGGAAAAGCAGTATGGTGTGTCATG...GGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCACAGATGCGACACCATaGAGACACGCAGCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: EFVSSDPRSLDFWKDRISTDATP*RHAAVN
Trigger: GTTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGT...GGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCAAAGGTACAACAGATaGGACACCATGCAGACACGC +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLQRYNR*DTMQTR
Trigger: GCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTG...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGACTCAAACTGCTGGGTaGCCATTAGCCACCGGAGGG +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLTQTAG*PLATGG
Trigger: CCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGT...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTACTCAAACTGCTGGGTaGCCATTAGCCACCGGAGGG +
Preference number: 4 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFTQTAG*PLATGG
Trigger: CCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGT...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp TGCTATGAACGAGCACCGTCAGAGAATTCCCACCCACACGTACAGAAACACAGTGCAGACTCAAACTGCTaGGTGGCCATTAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: CYERAPSENSHPHVQKHSADSNC*VAISHR
Trigger: CCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGC...ACTGTGTTTCTGTACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTGCAGACTCAAACTGCTaGGTGGCCATTAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFADSNC*VAISHR
Trigger: CCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGC...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCACTCTTTCTCCAGCTCTaGTATCACACCCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: LLRPALLGLLERQDFPTPLFLQL*YHTLDV
Trigger: GACATCAAGGGTGTGATACCAGAGCTGGAGAAAGAG...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTGGCCCATCATGCTCCTaGCAAAGCAGTGGTGGATCC +
Preference number: 4 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFGPSCS*QSSGGS
Trigger: GGATCCACCACTGCTTTGCCAGGAGCATGATGGGCC...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp TCACTCATCCCTGAGTCTGGGTGCTGGCTGTACTTTCCAATCAGGTTGAGGAGGCCTGAGTCTGGGTGCTaGCTGTACTTTCCAATCAGG +
Preference number: 4 (lower is better)
Translates to: SLIPESGCWLYFPIRLRRPESGC*LYFPIR
Trigger: CCTGATTGGAAAGTACAGCCAGCACCCAGACTCAGG...CCTCCTCAACCTGATTGGAAAGTACAGCCAGCACCCAGACTCAGGGATGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CCA 90 bp CAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATCCGACCCGCGCTCCTTaGACTTTTGGAAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: QRVCLLRPALLGLLERQDPTRAP*TFGKTG
Trigger: TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGG...ATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGAGAGGGACTTTTCTGCTaGAGCCAATCTGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGEGLFC*SQSGRG
Trigger: TCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTC...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp TCGGTTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGAGGGACTTTTCTGCTaGAGCCAATCTGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SVGSHFIVSPRPETTISLEGLFC*SQSGRG
Trigger: TCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTC...CAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCATGCCTTCGAGAGGCTaGAGGTCATTTGGACTCACC +
Preference number: 4 (lower is better)
Translates to: EFVSSDPRSLDFWKDRISMPSRG*RSFGLT
Trigger: GGTGAGTCCAAATGACCTCCAGCCTCTCGAAGGCAT...GGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGAAGCAGCAGGCCGGGTaGAAAGCCAGAAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLKQQAG*KARRGE
Trigger: TTCTCCCCTTCTGGCTTTCCACCCGGCCTGCTGCTT...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCTGTGTGGACCGCATGTaGAGGAGACATGAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGLLERQDFCVDRM*RRHEWR
Trigger: TCGCCACTCATGTCTCCTCCACATGCGGTCCACACA...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGTACTGGCCTGGCTACTaGATAGGTCCTATTCTGTAC +
Preference number: 4 (lower is better)
Translates to: CVSLPREVIPFVISERERYWPGY*IGPILY
Trigger: GTACAGAATAGGACCTATCCAGTAGCCAGGCCAGTA...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACCACGCCTCTGCTCCCTaGATCTTCACTGAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDHASAP*IFTESL
Trigger: CAGGCTCTCAGTGAAGATCCAGGGAGCAGAGGCGTG...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490273.5
3UTR CAA 72 bp GGGGTGAGCCAGACTGGCCAGTGCATTTGCAGATTTTaGGAGCTGGGTGATGGGCTCATTCCACTCTTCTAT +
Preference number: 4 (lower is better)
Translates to: GVSQTGQCICRF*ELGDGLIPLFY
Trigger: ATAGAAGAGTGGAATGAGCCCATCACCCAGCTCCAAAAATCTGCAAATGCACTGGCCAGTCTGGCTCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380298.2
3UTR CAA 72 bp ATGCCCACGATGGAAAACGCGATGGAAAATTTGTCCTaGACGCTGTCACTCATCCCTGAGTCTGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: MPTMENAMENLS*TLSLIPESGCW
Trigger: CCAGCACCCAGACTCAGGGATGAGTGACAGCGTCAAGGACAAATTTTCCATCGCGTTTTCCATCGTGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR TCA 90 bp TCTGTAGCCAAACCAATTTACCAGCCCGTCTTCCAGATGCAGGTGATCTTACTCCAAGATCCCACTTGCTaGCCACGTTCTGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: SVAKPIYQPVFQMQVILLQDPTC*PRSGRG
Trigger: GCCTCGTCCAGAACGTGGTCAGCAAGTGGGATCTTG...GAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGCTGGTATCACACCCTTaGTGTCGCCCTCAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLLVSHP*CRPQGS
Trigger: TGAACCCTGAGGGCGACATCAAGGGTGTGATACCAG...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTACTTTCCAATCAGGTTaGGGAGGCCGAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFTFQSG*GGRAAG
Trigger: TCCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGT...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp TCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCTGGAAAATTTGTCCTTaGCGCTGTCACTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: SDTDIFPGPRVAPCSPFLWKICP*RCHSSL
Trigger: CAGGGATGAGTGACAGCGTCAAGGACAAATTTTCCA...GAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR TCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCTGCAGCAGGCAAAGATaGTGTGGTGCAGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGLLERQDFCSRQR*CGAGSS
Trigger: GCTACTTCCTGCACCACATCATCTTTGCCTGCTGCA...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp TTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGAAGATTTGGACTCACCTATaGGGAATCTCCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LEVTSLSHPGPRPQFPWKIWTHL*GISAPC
Trigger: GCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAAT...CTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGAATCTTTCAATTTGTCTTaGTGCCTTCGAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: EAGGHLDSPMRNLRSLPESFNLS*CLREAG
Trigger: TCCAGCCTCTCGAAGGCATCAAGACAAATTGAAAGA...TTCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR TCA 90 bp CTGTCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGATGACCAGAAGAGTGTaGGTGCTGTCCCTTGCCACC +
Preference number: 4 (lower is better)
Translates to: LSLSRLGCPTSFLRKCQEMTRRV*VLSLAT
Trigger: GGTGGCAAGGGACAGCACTCACACTCTTCTGGTCAT...CTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp TCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGGAACAGGTATCCCTAGGCTaGAGCTGCCACCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: SLSRLGCPTSFLRKCQEEQVSLG*SCHQTG
Trigger: GCCTGTTTGGTGGCAGCTTCAGCCTAGGGATACCTG...TTCCTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp TCTGTAGCCAAACCAATTTACCAGCCCGTCTTCCAGATGCAGGTGATCTTACTCCAGGTATCCCTAGGCTaGAGCTGCCACCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: SVAKPIYQPVFQMQVILLQVSLG*SCHQTG
Trigger: GCCTGTTTGGTGGCAGCTTCAGCCTAGGGATACCTG...GAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAACGTAAGCTTGTGCTATaGACGAGCACCGTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: ACARGTFLLEPIWERRNKRKLVL*TSTVRE
Trigger: TTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACG...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCGTGGATACCATCAGGTaGGGTAGGGAAGACATTCCA +
Preference number: 4 (lower is better)
Translates to: EFVSSDPRSLDFWKDRISVDTIR*GREDIP
Trigger: TGGAATGTCTTCCCTACCTCACCTGATGGTATCCAC...GGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCTGGCTGTGAGACTTTaGAGAAGCCTGGCTCCGAAC +
Preference number: 4 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFLAVRL*RSLAPN
Trigger: GTTCGGAGCCAGGCTTCTTCAAAGTCTCACAGCCAG...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490273.5
CDS-3UTR GCA 90 bp CCATACACAGACTCTAGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAACCAGCTCGGTGCCTTTaGCGGCCCCGCGGCACCAGA +
Preference number: 4 (lower is better)
Translates to: PYTDSSKSQIHVHFTPSKPARCL*RPRGTR
Trigger: TCTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGG...TTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCTAGAGTCTGTGTATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp ACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGTGTTGCTGTTGCTCCGGTTaGCCGCAGCCTCCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TYRNTVFILQPQGQGGKCCCCSG*PQPPRG
Trigger: CCCCCTGGGAGGCTGCGGGCAACCGGAGCAACAGCA...ACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TCTGTAGCCAAACCAATTTACCAGCCCGTCTTCCAGATGCAGGTGATCTTACTCGATGCCGTAGTCCCATaGGCGGCAGTCACAGTTGGA +
Preference number: 4 (lower is better)
Translates to: SVAKPIYQPVFQMQVILLDAVVP*AAVTVG
Trigger: TCCAACTGTGACTGCCGCGCATGGGACTACGGCATC...GAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTAGGACACCAGCGCGATaGTGGCCGTGGTATAGTAGT +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTRTPAR*WPWYSS
Trigger: ACTACTATACCACGGCCAGCATCGCGCTGGTGTCCT...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp CAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATCATGGGAGGCAAACATaGCCACGATGGAAAACGCGA +
Preference number: 4 (lower is better)
Translates to: QRVCLLRPALLGLLERQDHGRQT*PRWKTR
Trigger: TCGCGTTTTCCATCGTGGGCATGTTTGCCTCCCATG...ATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp AAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACGCTTCCACGGTCCTCTCCTaGCTCTGCACGCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: KAKFMYISLRLKCSPGNASTVLS*LCTQAG
Trigger: GCCTGCCTGCGTGCAGAGGCAGGAGAGGACCGTGGA...AGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTAGCTGGTGCCCAAGTTaGTACAAAGTGGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFSWCPS*YKVVPA
Trigger: GGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCT...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGGTCCAGAAAAGCTGGTaGCCAAGTTGCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLVQKSW*PSCYKV
Trigger: CACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGAC...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGAAGGGCCAAGAGTCTGCTTaGCCCTTGCTGTGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: LEVTSLSHPGPRPQFPWKGQESA*PLLCLY
Trigger: GTAAAGACACAGCAAGGGGCAAGCAGACTCTTGGCC...CTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCTTAATGGTAGTGAAATaGCCTTCGGTGGATACCATC +
Preference number: 4 (lower is better)
Translates to: QVVPAQELPVHEGLFCWSLMVVK*PSVDTI
Trigger: GATGGTATCCACCGAAGGGCATTTCACTACCATTAA...GCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GCCAGGCTGTCCAGAAAAGCTGGTGCCCAAGTTGCTACAAAGTGGTGCCTGCCCGAGAACTTAGCGATATaGACCTTCCAGGCATTATCA +
Preference number: 4 (lower is better)
Translates to: ARLSRKAGAQVATKWCLPENLAI*TFQALS
Trigger: TGATAATGCCTGGAAGGTCCATATCGCTAAGTTCTC...GGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GCAGACTCAAACTGCTGGGTGGCCATTAGCCACCGGAGGGACTCGGGGAATATCGAGAACTTAGCGATATaGACCTTCCAGGCATTATCA +
Preference number: 4 (lower is better)
Translates to: ADSNCWVAISHRRDSGNIENLAI*TFQALS
Trigger: TGATAATGCCTGGAAGGTCCATATCGCTAAGTTCTC...GATATTCCCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CCA 90 bp AAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACGCTGGAACTGGCCCGCCATaGCCACGAAGCTCGCCACCA +
Preference number: 4 (lower is better)
Translates to: KAKFMYISLRLKCSPGNAGTGPP*PRSSPP
Trigger: TGGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCC...AGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAAGGCGGCAGACACCTaGCAGCGCCCAAGGAATAAA +
Preference number: 4 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDKAADT*QRPRNK
Trigger: TTTATTCCTTGGGCGCTGCCAGGTGTCTGCCGCCTT...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp TCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCCTCTTTCTCCAGCTCTaGTATCACACCCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: SDTDIFPGPRVAPCSPFLLFLQL*YHTLDV
Trigger: GACATCAAGGGTGTGATACCAGAGCTGGAGAAAGAG...GAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTCGATGCAGACCTTCTTaGGCCTCCGGGAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTRCRPS*ASGKAL
Trigger: AAGAGCTTTCCCGGAGGCCCAAGAAGGTCTGCATCG...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCGCGCGATGCTGGCCGTaGTATAGTAGTCAGCATAGA +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGLLERQDFARCWP*YSSQHR
Trigger: TCTATGCTGACTACTATACCACGGCCAGCATCGCGC...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAACACCAGCGCGATGCTaGCCGTGGTATAGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTTPARC*PWYSSQ
Trigger: CTGACTACTATACCACGGCCAGCATCGCGCTGGTGT...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTACACCAGCGCGATGCTaGCCGTGGTATAGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFTPARC*PWYSSQ
Trigger: CTGACTACTATACCACGGCCAGCATCGCGCTGGTGT...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp TTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGAAGCCTGAGTCTGGGTGCTaGCTGTACTTTCCAATCAGG +
Preference number: 4 (lower is better)
Translates to: LEVTSLSHPGPRPQFPWKPESGC*LYFPIR
Trigger: CCTGATTGGAAAGTACAGCCAGCACCCAGACTCAGG...CTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406686.8
CDS-3UTR CCA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACATGCGTGTTCGGTCCCTaGTCTGTAAACCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTCVFGP*SVNLCP
Trigger: TGGGCACAGGTTTACAGACCAGGGACCGAACACGCA...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CTGTCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGTGCGTGTTCGGTCCCTaGTCTGTAAACCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LSLSRLGCPTSFLRKCQECVFGP*SVNLCP
Trigger: TGGGCACAGGTTTACAGACCAGGGACCGAACACGCA...CTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CACGCAGCTGTGAACGACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGATGCGTGTTCGGTCCCTaGTCTGTAAACCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: HAAVNDSSELSVSLCYERCVFGP*SVNLCP
Trigger: TGGGCACAGGTTTACAGACCAGGGACCGAACACGCA...TCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTCGTTCACAGCTGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTTTGAGAGGCTCAGCTTaGCTGAGGCAGCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFLRGSA*LRQLSH
Trigger: GTGGGAAAGCTGCCTCAGCCAAGCTGAGCCTCTCAA...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTGAGAGGCTCAGCTTaGCTGAGGCAGCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTLRGSA*LRQLSH
Trigger: GTGGGAAAGCTGCCTCAGCCAAGCTGAGCCTCTCAA...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATGAGGGACTTTTCTGCTaGAGCCAATCTGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: QRVCLLRPALLGLLERQDEGLFC*SQSGRG
Trigger: TCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTC...ATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp CGGAGGATTTTATTACTCACCATTAATGGTAGTGAAATGCCCTTCGGTGGATACCTGCTGCTCCCGGGGTaGCCGCGCTGTATTTCTCCG +
Preference number: 4 (lower is better)
Translates to: RRILLLTINGSEMPFGGYLLLPG*PRCISP
Trigger: CGGAGAAATACAGCGCGGCCACCCCGGGAGCAGCAG...GTATCCACCGAAGGGCATTTCACTACCATTAATGGTGAGTAATAAAATCCTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCGAAGGACACAGCCCATaGCAAAGACATGCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: EFVSSDPRSLDFWKDRISEGHSP*QRHASR
Trigger: TCTCGAAGCATGTCTTTGCCATGGGCTGTGTCCTTC...GGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TCTGTAGCCAAACCAATTTACCAGCCCGTCTTCCAGATGCAGGTGATCTTACTCAAGTGGACTGCAGGGTaGCCTGGTGCTGAGGGTGAT +
Preference number: 4 (lower is better)
Translates to: SVAKPIYQPVFQMQVILLKWTAG*PGAEGD
Trigger: ATCACCCTCAGCACCAGGCCACCCTGCAGTCCACTT...GAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp ATCTCAGGTCTCGACGCATCTGTTAGCTGTGTACTCACAAAGCTGTGGCGATATCGTATCAGGCTTGGGTaGGTCCTGCCACCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: ISGLDASVSCVLTKLWRYRIRLG*VLPPCS
Trigger: TGAGCAAGGTGGCAGGACCCACCCAAGCCTGATACG...ATATCGCCACAGCTTTGTGAGTACACAGCTAACAGATGCGTCGAGACCTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CTCACAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGGACGGTGCTGGGAAGTaGGCAGCCGTAGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LTKLWRYDCCSIKISGEMDGAGK*AAVAAS
Trigger: GGAGGCTGCTACGGCTGCCCACTTCCCAGCACCGTC...CATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCATCTGAGTCTGGGTGCTaGCTGTACTTTCCAATCAGG +
Preference number: 4 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSSESGC*LYFPIR
Trigger: CCTGATTGGAAAGTACAGCCAGCACCCAGACTCAGA...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436008.6
CDS-3UTR TCA 90 bp GCCATGTTTTCAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTTGGAAAATTTGTCCTTaGCGCTGTCACTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: AMFSSSAGTRAACARGTFWKICP*RCHSSL
Trigger: CAGGGATGAGTGACAGCGTCAAGGACAAATTTTCCA...AAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTGAAAACATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000497691.5
CDS-3UTR TCA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACATGCAGCAGGCAAAGATaGTGTGGTGCAGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTCSRQR*CGAGSS
Trigger: GCTACTTCCTGCACCACATCATCTTTGCCTGCTGCA...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGTCCATTTGTGATCAGTaGGAGGGAGAGGGAATAAAG +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLSICDQ*EGEGIK
Trigger: CTTTATTCCCTCTCCCTCTCACTGATCACAAATGGA...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGAGCACCGTCAGAGAATGGCCATCCAAGCTGGTaGTCTTCATGGTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: DSSELSVSLCYERAPSENGHPSW*SSWCVL
Trigger: GAGCACACACCATGAAGATCACCAGCTTGGATGGCC...ATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AGTGAGACTGCTCGCAACTTTCATCACTTAGCATATCCTTCCACAACACAGTACCCCTGGAGTGATGTCTaGGGTGACGGCCATCCAAGC +
Preference number: 4 (lower is better)
Translates to: SETARNFHHLAYPSTTQYPWSDV*GDGHPS
Trigger: GCTTGGATGGCCGTCACCTCAGACATCACTCCAGGG...GTACTGTGTTGTGGAAGGATATGCTAAGTGATGAAAGTTGCGAGCAGTCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp TCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGGAATCTGTGCTATGCGAGTaGCTGCAAGCAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLSRLGCPTSFLRKCQEESVLCE*LQAGSW
Trigger: CCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGA...TTCCTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACATTTGGACTCACCTATaGGGAATCTCCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDIWTHL*GISAPC
Trigger: GCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAAT...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR TCA 90 bp CTGTCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGAAAACACACGGGACATaGAAGCGAGGTGGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LSLSRLGCPTSFLRKCQEKTHGT*KRGGAF
Trigger: GAAGGCACCACCTCGCTTTCATGTCCCGTGTGTTTT...CTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp ACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGGCAGTGAGGTCTGAATaGACACGGAGGATTTTATTA +
Preference number: 4 (lower is better)
Translates to: TRAACARGTFLLEPIWERAVRSE*TRRILL
Trigger: TAATAAAATCCTCCGTGTTCATTCAGACCTCACTGC...CCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGGCAGTGAGGTCTGAATaGACACGGAGGATTTTATTA +
Preference number: 4 (lower is better)
Translates to: CVSLPREVIPFVISERERAVRSE*TRRILL
Trigger: TAATAAAATCCTCCGTGTTCATTCAGACCTCACTGC...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGAAAAGTAGTGACGCAGTaGGGTCTGAATGAACACGGA +
Preference number: 4 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGKVVTQ*GLNEHG
Trigger: TCCGTGTTCATTCAGACCTCACTGCGTCACTACTTT...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGTCCAGCCTCTGCCTCTaGCTACCTTTAAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLSSLCL*LPLRPG
Trigger: TCCTGGTCTTAAAGGTAGTCAGAGGCAGAGGCTGGA...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCACGACCCAGTCAGCAATaGATCCAGTTATTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSRPSQQ*IQLLGS
Trigger: GCTACCTAATAACTGGATGCATTGCTGACTGGGTCG...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp ATCTCAGGTCTCGACGCATCTGTTAGCTGTGTACTCACAAAGCTGTGGCGATATAGGACACCAGCGCGATaGTGGCCGTGGTATAGTAGT +
Preference number: 4 (lower is better)
Translates to: ISGLDASVSCVLTKLWRYRTPAR*WPWYSS
Trigger: ACTACTATACCACGGCCAGCATCGCGCTGGTGTCCT...ATATCGCCACAGCTTTGTGAGTACACAGCTAACAGATGCGTCGAGACCTGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTCATGGGAGGCAAACATaGCCACGATGGAAAACGCGA +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTHGRQT*PRWKTR
Trigger: TCGCGTTTTCCATCGTGGGCATGTTTGCCTCCCATG...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp CTCACAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGGCAGGTTCTGGTCCCTaGTCTCGGGCAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LTKLWRYDCCSIKISGEMAGSGP*SRAAGG
Trigger: TCCTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGC...CATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp AGTGAGACTGCTCGCAACTTTCATCACTTAGCATATCCTTCCACAACACAGTACTCTTCCCAGAGCAACTaGGTCTCGCTGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SETARNFHHLAYPSTTQYSSQSN*VSLPRE
Trigger: CTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGA...GTACTGTGTTGTGGAAGGATATGCTAAGTGATGAAAGTTGCGAGCAGTCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTCACGAGGGACTTTTCTaGTGGAGCCAATCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTHEGLF*WSQSGR
Trigger: TCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTG...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp TCTGTAGCCAAACCAATTTACCAGCCCGTCTTCCAGATGCAGGTGATCTTACTCGAAGCCCCACCTCTGTaGTATGCGAGTGACTGCAAG +
Preference number: 4 (lower is better)
Translates to: SVAKPIYQPVFQMQVILLEAPPL*YASDCK
Trigger: CTTGCAGTCACTCGCATAGCACAGAGGTGGGGCTTC...GAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp GACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGAGCACCGTCAGAGAATACGTGGCCAAGAGTCTaGTTGCCCCTTGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: DSSELSVSLCYERAPSENTWPRV*LPLAVS
Trigger: AGACACAGCAAGGGGCAAGCAGACTCTTGGCCACGT...ATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATATGAAAGCGAGGTGGTaGCTTCTAGACGAGAGGACA +
Preference number: 4 (lower is better)
Translates to: QRVCLLRPALLGLLERQDMKARW*LLDERT
Trigger: TGTCCTCTCGTCTAGAAGGCACCACCTCGCTTTCAT...ATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGTCTTCACTGAGAGCCTaGGGCAGGAAAGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLSSLRA*GRKALF
Trigger: GAACAGAGCTTTCCTGCCGCAGGCTCTCAGTGAAGA...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490273.5
CDS-3UTR CCA 90 bp TTATGGCACTTGCAGTTTGGGATTGCTCATTTGGCTCTAGGAAGCGGTGGTGTCAACGAGTCCGAGAACTaGCTGAAGCCGATGAACAGC +
Preference number: 4 (lower is better)
Translates to: LWHLQFGIAHLALGSGGVNESEN*LKPMNS
Trigger: GCTGTTCATCGGCTTCAGCCAGTTCTCGGACTCGTT...GACACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp ATCTCAGGTCTCGACGCATCTGTTAGCTGTGTACTCACAAAGCTGTGGCGATATAAGGCGGCAGACACCTaGCAGCGCCCAAGGAATAAA +
Preference number: 4 (lower is better)
Translates to: ISGLDASVSCVLTKLWRYKAADT*QRPRNK
Trigger: TTTATTCCTTGGGCGCTGCCAGGTGTCTGCCGCCTT...ATATCGCCACAGCTTTGTGAGTACACAGCTAACAGATGCGTCGAGACCTGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380302.8
ENST00000497691.5
CDS-3UTR CCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCACACAAGATCCCACTaGCTCCGAACATCATCGGTT +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGLLERQDFHTRSH*LRTSSV
Trigger: AACCGATGATGTTCGGAGCCAGTGGGATCTTGTGTG...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380302.8
ENST00000497691.5
CDS-3UTR CCA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACGCGCGATGCTGGCCGTaGTATAGTAGTCAGCATAGA +
Preference number: 4 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDARCWP*YSSQHR
Trigger: TCTATGCTGACTACTATACCACGGCCAGCATCGCGC...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp ATCTCAGGTCTCGACGCATCTGTTAGCTGTGTACTCACAAAGCTGTGGCGATATACACCAGCGCGATGCTaGCCGTGGTATAGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: ISGLDASVSCVLTKLWRYTPARC*PWYSSQ
Trigger: CTGACTACTATACCACGGCCAGCATCGCGCTGGTGT...ATATCGCCACAGCTTTGTGAGTACACAGCTAACAGATGCGTCGAGACCTGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGCCTGAGTCTGGGTGCTaGCTGTACTTTCCAATCAGG +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLPESGC*LYFPIR
Trigger: CCTGATTGGAAAGTACAGCCAGCACCCAGACTCAGG...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCACAAACATGCCCACGATaGAAAACGCGATGGAAAATT +
Preference number: 4 (lower is better)
Translates to: LLRPALLGLLERQDFPTPQTCPR*KTRWKI
Trigger: AATTTTCCATCGCGTTTTCCATCGTGGGCATGTTTG...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp GCCAGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCAAACATGCCCACGATaGAAAACGCGATGGAAAATT +
Preference number: 4 (lower is better)
Translates to: ARRSDTDIFPGPRVAPCSQTCPR*KTRWKI
Trigger: AATTTTCCATCGCGTTTTCCATCGTGGGCATGTTTG...GGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CCA 90 bp ATCTCAGGTCTCGACGCATCTGTTAGCTGTGTACTCACAAAGCTGTGGCGATATCCGACCCGCGCTCCTTaGACTTTTGGAAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: ISGLDASVSCVLTKLWRYPTRAP*TFGKTG
Trigger: TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGG...ATATCGCCACAGCTTTGTGAGTACACAGCTAACAGATGCGTCGAGACCTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp GAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCGCTGTCCAGAAAAGCTaGTGCCCAAGTTGCTACAAA +
Preference number: 4 (lower is better)
Translates to: EFVSSDPRSLDFWKDRISAVQKS*CPSCYK
Trigger: TTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGC...GGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TCGGTTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGCGAGAAGGGATGAGTTaGACAATGCCAGTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: SVGSHFIVSPRPETTISLREGMS*TMPVRS
Trigger: GCTTCTTACTGGCATTGTCCAACTCATCCCTTCTCG...CAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAACCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGAGCACCGTCAGAGAATTCCCCAACTGCCTACTaGCCTGGCTACTGGATAGGT +
Preference number: 4 (lower is better)
Translates to: DSSELSVSLCYERAPSENSPTAY*PGYWIG
Trigger: ACCTATCCAGTAGCCAGGCCAGTAGGCAGTTGGGGA...ATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CTCACAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGCGTGACAGACGGTGCTaGGAAGTGGGCAGCCGTAGC +
Preference number: 4 (lower is better)
Translates to: LTKLWRYDCCSIKISGEMRDRRC*EVGSRS
Trigger: GCTACGGCTGCCCACTTCCCAGCACCGTCTGTCACG...CATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CACGCAGCTGTGAACGACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGAGTCAAGTTGAAACAGTaGGTGCCTGCGAAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: HAAVNDSSELSVSLCYERVKLKQ*VPAKGL
Trigger: GAGACCCTTCGCAGGCACCCACTGTTTCAACTTGAC...TCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTCGTTCACAGCTGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAGAGTAGCAGGGGGTaGGAGGGTCAAGTTGAAACA +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLESSRG*EGQVET
Trigger: TGTTTCAACTTGACCCTCCCACCCCCTGCTACTCTC...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TTATGGCACTTGCAGTTTGGGATTGCTCATTTGGCTCTAGGAAGCGGTGGTGTCGACATGAAAGCGAGGTaGTGCCTTCTAGACGAGAGG +
Preference number: 4 (lower is better)
Translates to: LWHLQFGIAHLALGSGGVDMKAR*CLLDER
Trigger: CCTCTCGTCTAGAAGGCACCACCTCGCTTTCATGTC...GACACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACACTGCTGAGTGAACGCTaGCTCCTTCCACAATCACTC +
Preference number: 4 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTLLSER*LLPQSL
Trigger: GAGTGATTGTGGAAGGAGCCAGCGTTCACTCAGCAG...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490273.5
3UTR CAA 72 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTaGGACTTTTGGAAAGACAGGATTTCCCCACACCAG +
Preference number: 4 (lower is better)
Translates to: ISKEFVSSDPRS*DFWKDRISPHQ
Trigger: CTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
3UTR CAA 72 bp GTGAATTCTAGCAACTGTCGGTTGGAAGTCACTTCATaGTCTCACCCAGGCCCGAGACCACAATTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VNSSNCRLEVTS*SHPGPRPQFPW
Trigger: CCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAACCGACAGTTGCTAGAATTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CAA 72 bp GCAGCTGTGAACGACAGTTCAGAACTCAGCGTAAGCTaGTGCTATGAACGAGCACCGTCAGAGAATTCCCAC +
Preference number: 4 (lower is better)
Translates to: AAVNDSSELSVS*CYERAPSENSH
Trigger: GTGGGAATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTCGTTCACAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CAA 72 bp GCAAACATGCCCACGATGGAAAACGCGATGGAAAATTaGTCCTTGACGCTGTCACTCATCCCTGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: ANMPTMENAMEN*SLTLSLIPESG
Trigger: CCCAGACTCAGGGATGAGTGACAGCGTCAAGGACAAATTTTCCATCGCGTTTTCCATCGTGGGCATGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR TCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTGCGATTCTTCTGTGTaGAGTGGAGGATCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTCDSSV*SGGSAS
Trigger: AGAGGCTGATCCTCCACTTCACACAGAAGAATCGCA...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp AGTTTCCTCCGAAAATGCCAAGAGGAAACCTCCACTTTCTGGGGTGAAACGAGGTGCGATTCTTCTGTGTaGAGTGGAGGATCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SFLRKCQEETSTFWGETRCDSSV*SGGSAS
Trigger: AGAGGCTGATCCTCCACTTCACACAGAAGAATCGCA...CCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp TACATACAAATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTCACTCATCCCTaGGTCTGGGTGCTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: YIQIFPKGTTDATPCRHAAVTHP*VWVLAV
Trigger: TACAGCCAGCACCCAGACTCAGGGATGAGTGACAGC...TGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATTTGTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406686.8
CDS-3UTR TCA 90 bp CAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTGGAAAATTTGTCCTTaGCGCTGTCACTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: QRVCLLRPALLGLLERQDWKICP*RCHSSL
Trigger: CAGGGATGAGTGACAGCGTCAAGGACAAATTTTCCA...ATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp AGCTCTGGTATCACACCCTTGATGTCGCCCTCAGGGTTCATGCGATTCTTCTGTTGGAAAATTTGTCCTTaGCGCTGTCACTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: SSGITPLMSPSGFMRFFCWKICP*RCHSSL
Trigger: CAGGGATGAGTGACAGCGTCAAGGACAAATTTTCCA...ACAGAAGAATCGCATGAACCCTGAGGGCGACATCAAGGGTGTGATACCAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR TCA 90 bp TCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGGAATTATCACCGTCGGGGTaGTCTCCGCACAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: SLSRLGCPTSFLRKCQEELSPSG*SPHRRT
Trigger: TGTTCTTCTGTGCGGAGATCACCCCGACGGTGATAA...TTCCTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CTCACAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGGGTTGTGCAGCTCGATaGTGGGTGCCGTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: LTKLWRYDCCSIKISGEMGCAAR*WVPSAC
Trigger: GCATGCTGACGGCACCCATCATCGAGCTGCACAACC...CATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR TCA 90 bp TCGGTTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGTCTTTCAATTTGTCTTaGTGCCTTCGAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SVGSHFIVSPRPETTISLSFNLS*CLREAG
Trigger: TCCAGCCTCTCGAAGGCATCAAGACAAATTGAAAGA...CAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GGCATCTTCCCAGAGCAACTGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTAGCGTTGAGCTTTGGTaGGTTATTGCTTTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: GIFPEQLRLAAQGGDSICSVELW*VIAFFQ
Trigger: TTGAAAGAAAGCAATAACTCACCAAAGCTCAACGCT...ACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAACTCCACTTTCTGGGGTaGAACGAGGAACACGAAGAG +
Preference number: 4 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCELHFLG*NEEHEE
Trigger: CTCTTCGTGTTCCTCGTTTCACCCCAGAAAGTGGAG...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CCCACACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGATCTCCAGGCCCTTACTaGTGTGTGGACCGCATGTGG +
Preference number: 4 (lower is better)
Translates to: PTRTETQFLYYNLKDREGSPGPY*CVDRMW
Trigger: CCACATGCGGTCCACACATCAGTAAGGGCCTGGAGA...TCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGTGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CCCACACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGAGGGGTTCAAGCGTaGCAGACGGTGCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PTRTETQFLYYNLKDREGRGVQA*QTVLGS
Trigger: ACTTCCCAGCACCGTCTGTCACGCTTGAACCCCTCT...TCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGTGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CCCACACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAGTGGGAGGGTCAAGTTaGAACAGTGGGTGCCTGCGA +
Preference number: 4 (lower is better)
Translates to: PTRTETQFLYYNLKDREGVGGSS*NSGCLR
Trigger: TCGCAGGCACCCACTGTTTCAACTTGACCCTCCCAC...TCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGTGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp GAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCGTGCATAACTTTTATTaGAAGGCTGACAGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: EFVSSDPRSLDFWKDRISVHNFY*KADRVG
Trigger: GCCTACCCTGTCAGCCTTTCAATAAAAGTTATGCAC...GGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCGACCCAGTCAGCAATaGATCCAGTTATTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGLLERQDFRPSQQ*IQLLGS
Trigger: GCTACCTAATAACTGGATGCATTGCTGACTGGGTCG...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGTTTGCAGACTCAAACTaGTGGGTGGCCATTAGCCAC +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLFADSN*WVAISH
Trigger: GTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAA...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTGAGGATCAGCCTCTTTaGAGACTCAAACTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTEDQPL*RLKLLG
Trigger: ACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTC...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp CAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTTATTGAGGAGGCCGAGCTaGAGGAGTGAGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: QSCGDMTAAQLRFLVKCLLRRPS*RSEARA
Trigger: CGCCCTGGCCTCACTCCTGCAGCTCGGCCTCCTCAA...TAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp AAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACGCTCAGCTCGATGATGGGTaGCGTCAGCATGCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: KAKFMYISLRLKCSPGNAQLDDG*RQHAEA
Trigger: GGCTTCGGCATGCTGACGGCACCCATCATCGAGCTG...AGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGCTGTGGCGATATGACTaGTGCTCAATTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: CVSLPREVIPFVISERERLWRYD*CSIKIS
Trigger: AGAAATCTTAATTGAGCAGCAGTCATATCGCCACAG...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AGTTTCCTCCGAAAATGCCAAGAGGAAACCTCCACTTTCTGGGGTGAAACGAGGCCCACAGGGAAGTGTTaGTGCTCTGGCAACATTTCA +
Preference number: 4 (lower is better)
Translates to: SFLRKCQEETSTFWGETRPTGKC*CSGNIS
Trigger: TGAAATGTTGCCAGAGCAGCAACACTTCCCTGTGGG...CCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACCTCAGCGTAAGCTTGTaGTATGAACGAGCACCGTCA +
Preference number: 4 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDLSVSL*YERAPS
Trigger: TGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAG...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAAAACGAGTCCGAGAACTaGCTGAAGCCGATGAACAGC +
Preference number: 4 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCENESEN*LKPMNS
Trigger: GCTGTTCATCGGCTTCAGCCAGTTCTCGGACTCGTT...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGAGAACTTAGCGATATaGACCTTCCAGGCATTATCA +
Preference number: 4 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPENLAI*TFQALS
Trigger: TGATAATGCCTGGAAGGTCCATATCGCTAAGTTCTC...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGGAGAACTTAGCGATATaGACCTTCCAGGCATTATCA +
Preference number: 4 (lower is better)
Translates to: PALLGLLERQDFPTPVERENLAI*TFQALS
Trigger: TGATAATGCCTGGAAGGTCCATATCGCTAAGTTCTC...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp CTGGCCAGTGCATTTGCAGATTTTTGGAGCTGGGTGATGGGCTCATTCCACTCTGCATTTGCAGATTTTTaGAGCTGGGTGATGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LASAFADFWSWVMGSFHSAFADF*SWVMGS
Trigger: TGAGCCCATCACCCAGCTCCAAAAATCTGCAAATGC...AGAGTGGAATGAGCCCATCACCCAGCTCCAAAAATCTGCAAATGCACTGGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CCA 90 bp ATCTCAGGTCTCGACGCATCTGTTAGCTGTGTACTCACAAAGCTGTGGCGATATCCTGAGTCTGGGTGCTaGCTGTACTTTCCAATCAGG +
Preference number: 4 (lower is better)
Translates to: ISGLDASVSCVLTKLWRYPESGC*LYFPIR
Trigger: CCTGATTGGAAAGTACAGCCAGCACCCAGACTCAGG...ATATCGCCACAGCTTTGTGAGTACACAGCTAACAGATGCGTCGAGACCTGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000497691.5
CDS-3UTR CCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCAAACATGCCCACGATaGAAAACGCGATGGAAAATT +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLQTCPR*KTRWKI
Trigger: AATTTTCCATCGCGTTTTCCATCGTGGGCATGTTTG...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp AAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACGCTTTCTCAGGCAGGTTCTaGTCCCTGCTCTCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KAKFMYISLRLKCSPGNAFSGRF*SLLSGS
Trigger: GCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAA...AGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAATCATGCCGTTGGCCGTaGCACCCTCGGGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SKSQIHVHFTPSKMQSRKSCRWP*HPRAVC
Trigger: ACACACTGCCCGAGGGTGCCACGGCCAACGGCATGA...TTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAAATGCCTTCGAGAGGCTaGAGGTCATTTGGACTCACC +
Preference number: 4 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCEMPSRG*RSFGLT
Trigger: GGTGAGTCCAAATGACCTCCAGCCTCTCGAAGGCAT...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTGAAACCTCCACTTTCTaGGGTGAAACGAGGAACACG +
Preference number: 4 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFETSTF*GETRNT
Trigger: CGTGTTCCTCGTTTCACCCCAGAAAGTGGAGGTTTC...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGAAGGCTGTCCAGAAAAGCTaGTGCCCAAGTTGCTACAAA +
Preference number: 4 (lower is better)
Translates to: LEVTSLSHPGPRPQFPWKAVQKS*CPSCYK
Trigger: TTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGC...CTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAAAGACCACAATTTCCCTaGAAGGACACAGCCCATGGC +
Preference number: 4 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCERPQFP*KDTAHG
Trigger: GCCATGGGCTGTGTCCTTCCAGGGAAATTGTGGTCT...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGAAGTACTGGCCTGGCTACTaGATAGGTCCTATTCTGTAC +
Preference number: 4 (lower is better)
Translates to: LEVTSLSHPGPRPQFPWKYWPGY*IGPILY
Trigger: GTACAGAATAGGACCTATCCAGTAGCCAGGCCAGTA...CTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGAGCACCGTCAGAGAATACACAGTACAGTAAGTaGACTGCAGGGTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: DSSELSVSLCYERAPSENTQYSK*TAGWPG
Trigger: ACCAGGCCACCCTGCAGTCCACTTACTGTACTGTGT...ATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGGAAGTGTTGCTGCTCTaGCAACATTTCATAAAGGTG +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLEVLLL*QHFIKV
Trigger: CACCTTTATGAAATGTTGCCAGAGCAGCAACACTTC...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCTCTTTCAATTTGTCTTaGTGCCTTCGAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RVCLLRPALLGLLERQDFSFNLS*CLREAG
Trigger: TCCAGCCTCTCGAAGGCATCAAGACAAATTGAAAGA...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR TCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGAGCGTTGAGCTTTGGTaGGTTATTGCTTTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLSVELW*VIAFFQ
Trigger: TTGAAAGAAAGCAATAACTCACCAAAGCTCAACGCT...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR TCA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAAGTTTACACGACCAGTaGGACTGCTCGCAACTTTCA +
Preference number: 4 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTSLHDQ*DCSQLS
Trigger: TGAAAGTTGCGAGCAGTCTCACTGGTCGTGTAAACT...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp AAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACGCTAGAGGGGTTCAAGCGTaGCAGACGGTGCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: KAKFMYISLRLKCSPGNARGVQA*QTVLGS
Trigger: ACTTCCCAGCACCGTCTGTCACGCTTGAACCCCTCT...AGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTTATGTGGTGGTGACCCCTaGCAGCTCGGTGCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: QSCGDMTAAQLRFLVKCLCGGDP*QLGAFA
Trigger: GGCAAAGGCACCGAGCTGGCAGGGGTCACCACCACA...TAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CTGTCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGCGACCCAGTCAGCAATaGATCCAGTTATTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: LSLSRLGCPTSFLRKCQERPSQQ*IQLLGS
Trigger: GCTACCTAATAACTGGATGCATTGCTGACTGGGTCG...CTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGCGACCCAGTCAGCAATaGATCCAGTTATTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLRPSQQ*IQLLGS
Trigger: GCTACCTAATAACTGGATGCATTGCTGACTGGGTCG...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR GCA 90 bp ATCTCAGGTCTCGACGCATCTGTTAGCTGTGTACTCACAAAGCTGTGGCGATATTTTGCAGACTCAAACTaGTGGGTGGCCATTAGCCAC +
Preference number: 4 (lower is better)
Translates to: ISGLDASVSCVLTKLWRYFADSN*WVAISH
Trigger: GTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAA...ATATCGCCACAGCTTTGTGAGTACACAGCTAACAGATGCGTCGAGACCTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAAGAGGATCAGCCTCTTTaGAGACTCAAACTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCEEDQPL*RLKLLG
Trigger: ACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTC...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CCATACACAGACTCTAGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAAGCAGGTTCTGGTCCCTaGTCTCGGGCAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PYTDSSKSQIHVHFTPSKAGSGP*SRAAGG
Trigger: TCCTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGC...TTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCTAGAGTCTGTGTATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TCTGTAGCCAAACCAATTTACCAGCCCGTCTTCCAGATGCAGGTGATCTTACTCTCACTCCGTCTAAAATaGAGTCCCGGAAACGCTCCA +
Preference number: 4 (lower is better)
Translates to: SVAKPIYQPVFQMQVILLSLRLK*SPGNAP
Trigger: TGGAGCGTTTCCGGGACTGCATTTTAGACGGAGTGA...GAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGTGGCGATATGACTGCTaGTCAATTAAGATTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LREAGGHLDSPMRNLRSLWRYDC*SIKISG
Trigger: ACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCA...CAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp CAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATAGTTTCCTCCGAAAATaGCAAGAGGAAACCTCCACT +
Preference number: 4 (lower is better)
Translates to: QRVCLLRPALLGLLERQDSFLRK*QEETST
Trigger: AGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACT...ATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGTTGGCACGCAAAGGCTaGACAGATCTAAAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLLARKG*TDLKKG
Trigger: GCCTTTCTTTAGATCTGTGCAGCCTTTGCGTGCCAA...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGGAAGTGAGTGCTGTCCCTTaGCACCAACTTCCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: SLSRLGCPTSFLRKCQEEVSAVP*HQLPRD
Trigger: ATCTCTAGGAAGTTGGTGGCAAGGGACAGCACTCAC...TTCCTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACGCTGGCTTGGGTGGGTCCTaGCACCTTGCTCACTTGGTA +
Preference number: 4 (lower is better)
Translates to: KAKFMYISLRLKCSPGNAGLGGS*HLAHLV
Trigger: TACCAAGTGAGCAAGGTGGCAGGACCCACCCAAGCC...AGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGAAGCCCACTTATGGCACTTaGAGTTTGGGATTGCTCATT +
Preference number: 4 (lower is better)
Translates to: LEVTSLSHPGPRPQFPWKPTYGT*SLGLLI
Trigger: AATGAGCAATCCCAAACTGCAAGTGCCATAAGTGGG...CTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCTGTGAAATGAAAGCGAGGTGGTaGCTTCTAGACGAGAGGACA +
Preference number: 4 (lower is better)
Translates to: NFPQRYNRCDTMQTRSCEMKARW*LLDERT
Trigger: TGTCCTCTCGTCTAGAAGGCACCACCTCGCTTTCAT...TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACGCTCACCAGAAGTTGGGCTaGTCCAGGAGGAACGAGTCC +
Preference number: 4 (lower is better)
Translates to: KAKFMYISLRLKCSPGNAHQKLG*SRRNES
Trigger: GGACTCGTTCCTCCTGGACCAGCCCAACTTCTGGTG...AGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp ACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGTGTCGCGGCAGTCACAGTTaGAGGCGTTGTCCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: TYRNTVFILQPQGQGGKCRGSHS*RRCPPC
Trigger: ACAAGGGGGACAACGCCTCCAACTGTGACTGCCGCG...ACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACCTCTTTCTCCAGCTCTaGTATCACACCCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDLFLQL*YHTLDV
Trigger: GACATCAAGGGTGTGATACCAGAGCTGGAGAAAGAG...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp AGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACTGGCAAAGCAGTGGTaGATCCCGTACCCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: SKSQIHVHFTPSKMQSRKLAKQW*IPYPVS
Trigger: GCTGACGGGGTACGGGATCCACCACTGCTTTGCCAG...TTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp ACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGTGTCTGGCAAAGCAGTGGTaGATCCCGTACCCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: TYRNTVFILQPQGQGGKCLAKQW*IPYPVS
Trigger: GCTGACGGGGTACGGGATCCACCACTGCTTTGCCAG...ACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TACATACAAATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAACACCAGCGCGATGCTaGCCGTGGTATAGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: YIQIFPKGTTDATPCRHATPARC*PWYSSQ
Trigger: CTGACTACTATACCACGGCCAGCATCGCGCTGGTGT...TGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATTTGTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGACAAACATGCCCACGATaGAAAACGCGATGGAAAATT +
Preference number: 4 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGQTCPR*KTRWKI
Trigger: AATTTTCCATCGCGTTTTCCATCGTGGGCATGTTTG...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp AGTGAGACTGCTCGCAACTTTCATCACTTAGCATATCCTTCCACAACACAGTACTTGAGAGGCTCAGCTTaGCTGAGGCAGCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SETARNFHHLAYPSTTQYLRGSA*LRQLSH
Trigger: GTGGGAAAGCTGCCTCAGCCAAGCTGAGCCTCTCAA...GTACTGTGTTGTGGAAGGATATGCTAAGTGATGAAAGTTGCGAGCAGTCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTTAGACCGGCCATGGCCCTaGTCACTGTGGCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: QSCGDMTAAQLRFLVKCLDRPWP*SLWHLP
Trigger: GGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTC...TAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTGTACTCACAAAGCTGTaGCGATATGACTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFVLTKL*RYDCCS
Trigger: TGAGCAGCAGTCATATCGCCACAGCTTTGTGAGTAC...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGTACTCACAAAGCTGTaGCGATATGACTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTVLTKL*RYDCCS
Trigger: TGAGCAGCAGTCATATCGCCACAGCTTTGTGAGTAC...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp CTGTCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGGTACTCACAAAGCTGTaGCGATATGACTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LSLSRLGCPTSFLRKCQEVLTKL*RYDCCS
Trigger: TGAGCAGCAGTCATATCGCCACAGCTTTGTGAGTAC...CTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTGTACTCACAAAGCTGTaGCGATATGACTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTVLTKL*RYDCCS
Trigger: TGAGCAGCAGTCATATCGCCACAGCTTTGTGAGTAC...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp TTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGAAGCTAGCAACTGTCGGTTaGAAGTCACTTCATTGTCTC +
Preference number: 4 (lower is better)
Translates to: LEVTSLSHPGPRPQFPWKLATVG*KSLHCL
Trigger: GAGACAATGAAGTGACTTCCAACCGACAGTTGCTAG...CTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TACATACAAATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGCCCTTACTGATGTGTaGACCGCATGTGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: YIQIFPKGTTDATPCRHAALTDV*TACGGD
Trigger: GTCTCCTCCACATGCGGTCCACACATCAGTAAGGGC...TGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATTTGTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGGAATTTCACAAGTTTaGCACGCAAAGGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLGISQV*HAKAAQ
Trigger: CTGTGCAGCCTTTGCGTGCCAAACTTGTGAAATTCC...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCCACACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGATCCCCAACTGCCTACTaGCCTGGCTACTGGATAGGT +
Preference number: 4 (lower is better)
Translates to: PTRTETQFLYYNLKDREGSPTAY*PGYWIG
Trigger: ACCTATCCAGTAGCCAGGCCAGTAGGCAGTTGGGGA...TCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGTGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTTATTGTCATTTGAGGTaGAGATCAGAGATCATGACC +
Preference number: 4 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPYCHLR*RSEIMT
Trigger: GGTCATGATCTCTGATCTCCACCTCAAATGACAATA...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGACTTTGAAGAAGCCTaGCTCCGAACATCATCGGTT +
Preference number: 4 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTDFEEA*LRTSSV
Trigger: AACCGATGATGTTCGGAGCCAGGCTTCTTCAAAGTC...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490273.5
CDS-3UTR TCA 90 bp CAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTTATCATCGGTTTCTGGGTaGAGGCGGCAGACACCTGGC +
Preference number: 4 (lower is better)
Translates to: QSCGDMTAAQLRFLVKCLSSVSG*RRQTPG
Trigger: GCCAGGTGTCTGCCGCCTTCACCCAGAAACCGATGA...TAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380302.8
ENST00000497691.5
CDS-3UTR TCA 90 bp CTGTCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGTCCATTTGTGATCAGTaGGAGGGAGAGGGAATAAAG +
Preference number: 4 (lower is better)
Translates to: LSLSRLGCPTSFLRKCQESICDQ*EGEGIK
Trigger: CTTTATTCCCTCTCCCTCTCACTGATCACAAATGGA...CTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp ACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGTGTCCACCACCTTCACGATaGAGACCTTCTTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TYRNTVFILQPQGQGGKCPPPSR*RPSWAS
Trigger: GGAGGCCCAAGAAGGTCTGCATCGTGAAGGTGGTGG...ACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CTCACAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGAGGACACCAGCGCGATaGTGGCCGTGGTATAGTAGT +
Preference number: 4 (lower is better)
Translates to: LTKLWRYDCCSIKISGEMRTPAR*WPWYSS
Trigger: ACTACTATACCACGGCCAGCATCGCGCTGGTGTCCT...CATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp GCCATGTTTTCAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTTGGCGATATGACTGCTaGTCAATTAAGATTTCTGGT +
Preference number: 4 (lower is better)
Translates to: AMFSSSAGTRAACARGTFWRYDC*SIKISG
Trigger: ACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCA...AAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTGAAAACATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp AGGACACCAGCGCGATGCTGGCCGTGGTATAGTAGTCAGCATAGAAGTTCTCCATGGCGATATGACTGCTaGTCAATTAAGATTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RTPARCWPWYSSQHRSSPWRYDC*SIKISG
Trigger: ACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCA...TGGAGAACTTCTATGCTGACTACTATACCACGGCCAGCATCGCGCTGGTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR GCA 90 bp CTCACAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGAGCTGGTGCCCAAGTTaGTACAAAGTGGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LTKLWRYDCCSIKISGEMSWCPS*YKVVPA
Trigger: GGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCT...CATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CCCACACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAGGCCAAGAGTCTGCTTaGCCCTTGCTGTGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: PTRTETQFLYYNLKDREGGQESA*PLLCLY
Trigger: GTAAAGACACAGCAAGGGGCAAGCAGACTCTTGGCC...TCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGTGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AGTTTCCTCCGAAAATGCCAAGAGGAAACCTCCACTTTCTGGGGTGAAACGAGGCTTGCAGTTTGGGATTaGTCATTTGGCTCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: SFLRKCQEETSTFWGETRLAVWD*SFGSRK
Trigger: CTTCCTAGAGCCAAATGAGCAATCCCAAACTGCAAG...CCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATCAAACATGCCCACGATaGAAAACGCGATGGAAAATT +
Preference number: 4 (lower is better)
Translates to: QRVCLLRPALLGLLERQDQTCPR*KTRWKI
Trigger: AATTTTCCATCGCGTTTTCCATCGTGGGCATGTTTG...ATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp AGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAAGTTGGTGAGCAGCAGTaGCTGCTCCCCCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: SKSQIHVHFTPSKMQSRKVGEQQ*LLPLLV
Trigger: CACAAGAAGGGGGAGCAGCCACTGCTGCTCACCAAC...TTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CTCACAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGCCGACCCGCGCTCCTTaGACTTTTGGAAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: LTKLWRYDCCSIKISGEMPTRAP*TFGKTG
Trigger: TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGG...CATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp ATCTCAGGTCTCGACGCATCTGTTAGCTGTGTACTCACAAAGCTGTGGCGATATCTGCTGGAGCCAATCTaGGAGAGGAGGAATAAAAAC +
Preference number: 4 (lower is better)
Translates to: ISGLDASVSCVLTKLWRYLLEPI*ERRNKN
Trigger: GTTTTTATTCCTCCTCTCCCAGATTGGCTCCAGCAG...ATATCGCCACAGCTTTGTGAGTACACAGCTAACAGATGCGTCGAGACCTGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp TTATGGCACTTGCAGTTTGGGATTGCTCATTTGGCTCTAGGAAGCGGTGGTGTCCTAGCAACTGTCGGTTaGAAGTCACTTCATTGTCTC +
Preference number: 4 (lower is better)
Translates to: LWHLQFGIAHLALGSGGVLATVG*KSLHCL
Trigger: GAGACAATGAAGTGACTTCCAACCGACAGTTGCTAG...GACACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACGCTGACAGCCTCCCTTCCTaGGTATCTCAAGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: KAKFMYISLRLKCSPGNADSLPS*VSQDPR
Trigger: CCTGGGATCTTGAGATACCCAGGAAGGGAGGCTGTC...AGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTATGGCACTTGCAGTTTaGGATTGCTCATTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFMALAV*DCSFGS
Trigger: AGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCAT...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TACATACAAATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGACATGAAAGCGAGGTaGTGCCTTCTAGACGAGAGG +
Preference number: 4 (lower is better)
Translates to: YIQIFPKGTTDATPCRHADMKAR*CLLDER
Trigger: CCTCTCGTCTAGAAGGCACCACCTCGCTTTCATGTC...TGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATTTGTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp TCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGGAAGTGCATAACTTTTATTaGAAGGCTGACAGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: SLSRLGCPTSFLRKCQEEVHNFY*KADRVG
Trigger: GCCTACCCTGTCAGCCTTTCAATAAAAGTTATGCAC...TTCCTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CCATACACAGACTCTAGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAACCTCGTGGCCCATCATaGTCCTGGCAAAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PYTDSSKSQIHVHFTPSKPRGPS*SWQSSG
Trigger: ACCACTGCTTTGCCAGGAGCATGATGGGCCACGAGG...TTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCTAGAGTCTGTGTATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACTACAAAGTGGTGCCTaGCCTTGCCAAGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SKSQIHVHFTPSKMQSRKLQSGA*PCQGGC
Trigger: ACAGCCTCCTTGGCAAGGGCAGGCACCACTTTGTAG...TTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CGGAGGATTTTATTACTCACCATTAATGGTAGTGAAATGCCCTTCGGTGGATACCCAGAAGAGTGTGAGTaGTGTCCCTTGCCACCAACT +
Preference number: 4 (lower is better)
Translates to: RRILLLTINGSEMPFGGYPEECE*CPLPPT
Trigger: AGTTGGTGGCAAGGGACAGCACTCACACTCTTCTGG...GTATCCACCGAAGGGCATTTCACTACCATTAATGGTGAGTAATAAAATCCTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CCCACACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGACTCAGCGTAAGCTTGTaGTATGAACGAGCACCGTCA +
Preference number: 4 (lower is better)
Translates to: PTRTETQFLYYNLKDREGLSVSL*YERAPS
Trigger: TGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAG...TCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGTGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTCAAACATGCCCACGATaGAAAACGCGATGGAAAATT +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTQTCPR*KTRWKI
Trigger: AATTTTCCATCGCGTTTTCCATCGTGGGCATGTTTG...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CCA 90 bp TACATACAAATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCAGAAGGACACAGCCCATaGCAAAGACATGCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: YIQIFPKGTTDATPCRHAEGHSP*QRHASR
Trigger: TCTCGAAGCATGTCTTTGCCATGGGCTGTGTCCTTC...TGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATTTGTATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCATACACAGACTCTAGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAATGGAGGAGACATGAGTaGCGACAGCAAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PYTDSSKSQIHVHFTPSKWRRHE*RQQAAG
Trigger: GCCTGCTGCTTGCTGTCGCCACTCATGTCTCCTCCA...TTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCTAGAGTCTGTGTATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGGAAGGGTTTGTTGACAGGTaGCTTTATAGCAAGTACTCC +
Preference number: 4 (lower is better)
Translates to: SLSRLGCPTSFLRKCQEEGFVDR*LYSKYS
Trigger: GGAGTACTTGCTATAAAGCCACCTGTCAACAAACCC...TTCCTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp GACAGTTCAGAACTCAGCGTAAGCTTGTGCTATGAACGAGCACCGTCAGAGAATGGGTTTGTTGACAGGTaGCTTTATAGCAAGTACTCC +
Preference number: 4 (lower is better)
Translates to: DSSELSVSLCYERAPSENGFVDR*LYSKYS
Trigger: GGAGTACTTGCTATAAAGCCACCTGTCAACAAACCC...ATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACGCTGAGAGTAGCAGGGGGTaGGAGGGTCAAGTTGAAACA +
Preference number: 4 (lower is better)
Translates to: KAKFMYISLRLKCSPGNAESSRG*EGQVET
Trigger: TGTTTCAACTTGACCCTCCCACCCCCTGCTACTCTC...AGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CCATACACAGACTCTAGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAAACTTTCCAATCAGGTTaGGGAGGCCGAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PYTDSSKSQIHVHFTPSKTFQSG*GGRAAG
Trigger: TCCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGT...TTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCTAGAGTCTGTGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTAGCGTTGAGCTTTGGTaGGTTATTGCTTTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTSVELW*VIAFFQ
Trigger: TTGAAAGAAAGCAATAACTCACCAAAGCTCAACGCT...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp CCATACACAGACTCTAGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAAAGGACACCAGCGCGATaGTGGCCGTGGTATAGTAGT +
Preference number: 4 (lower is better)
Translates to: PYTDSSKSQIHVHFTPSKRTPAR*WPWYSS
Trigger: ACTACTATACCACGGCCAGCATCGCGCTGGTGTCCT...TTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCTAGAGTCTGTGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp AAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACGCTGTGAGCTGCTTTCCCTaGACACGAACAGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: KAKFMYISLRLKCSPGNAVSCFP*TRTEAL
Trigger: AAGAGCTTCTGTTCGTGTGCAGGGAAAGCAGCTCAC...AGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp TACATACAAATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCACCCCTTCTGTGGATTTaGCTCTGCCATCTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: YIQIFPKGTTDATPCRHAPLLWI*LCHLFE
Trigger: CTCAAAAAGATGGCAGAGGCAAATCCACAGAAGGGG...TGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATTTGTATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp ACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGTGTTGGGTCCTGCCACCTTaGTCACTTGGTACCGGATTT +
Preference number: 4 (lower is better)
Translates to: TYRNTVFILQPQGQGGKCWVLPP*SLGTGF
Trigger: AAATCCGGTACCAAGTGAGCAAGGTGGCAGGACCCA...ACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TACATACAAATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCACTCTTTCTCCAGCTCTaGTATCACACCCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: YIQIFPKGTTDATPCRHALFLQL*YHTLDV
Trigger: GACATCAAGGGTGTGATACCAGAGCTGGAGAAAGAG...TGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATTTGTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CCATACACAGACTCTAGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAACCGACCCGCGCTCCTTaGACTTTTGGAAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: PYTDSSKSQIHVHFTPSKPTRAP*TFGKTG
Trigger: TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGG...TTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCTAGAGTCTGTGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp TCTGTAGCCAAACCAATTTACCAGCCCGTCTTCCAGATGCAGGTGATCTTACTCGAAGTGTTGCTGCTCTaGCAACATTTCATAAAGGTG +
Preference number: 4 (lower is better)
Translates to: SVAKPIYQPVFQMQVILLEVLLL*QHFIKV
Trigger: CACCTTTATGAAATGTTGCCAGAGCAGCAACACTTC...GAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
3UTR CAA 72 bp GAAAAGAAAGTCTTGAAAGGGTTATTTCCAAAGAGTTaGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGA +
Preference number: 4 (lower is better)
Translates to: EKKVLKGLFPKS*SPPTRAPWTFG
Trigger: TCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAAGACTTTCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR TCA 90 bp CAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTTATGCAGCAGGCAAAGATaGTGTGGTGCAGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: QSCGDMTAAQLRFLVKCLCSRQR*CGAGSS
Trigger: GCTACTTCCTGCACCACATCATCTTTGCCTGCTGCA...TAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR TCA 90 bp CAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTTAATTTGGACTCACCTATaGGGAATCTCCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: QSCGDMTAAQLRFLVKCLIWTHL*GISAPC
Trigger: GCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAAT...TAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR TCA 90 bp CGGAGGATTTTATTACTCACCATTAATGGTAGTGAAATGCCCTTCGGTGGATACATTAGTCCTGATGGCTaGAGTGCTGAGCAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: RRILLLTINGSEMPFGGYISPDG*SAEQCL
Trigger: AAGACACTGCTCAGCACTTCAGCCATCAGGACTAAT...GTATCCACCGAAGGGCATTTCACTACCATTAATGGTGAGTAATAAAATCCTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CTCACAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGCGACCCAGTCAGCAATaGATCCAGTTATTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: LTKLWRYDCCSIKISGEMRPSQQ*IQLLGS
Trigger: GCTACCTAATAACTGGATGCATTGCTGACTGGGTCG...CATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR GCA 90 bp TCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGGAACTGTGGCGATATGACTaGTGCTCAATTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: SLSRLGCPTSFLRKCQEELWRYD*CSIKIS
Trigger: AGAAATCTTAATTGAGCAGCAGTCATATCGCCACAG...TTCCTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CTCACAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGCTCTTTCTCCAGCTCTaGTATCACACCCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: LTKLWRYDCCSIKISGEMLFLQL*YHTLDV
Trigger: GACATCAAGGGTGTGATACCAGAGCTGGAGAAAGAG...CATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp CAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTTAGAGGGACTTTTCTGCTaGAGCCAATCTGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: QSCGDMTAAQLRFLVKCLEGLFC*SQSGRG
Trigger: TCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTC...TAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CCA 90 bp CTCACAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGCGAGAAGGGATGAGTTaGACAATGCCAGTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LTKLWRYDCCSIKISGEMREGMS*TMPVRS
Trigger: GCTTCTTACTGGCATTGTCCAACTCATCCCTTCTCG...CATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp AAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAACGCTGGAATTTCACAAGTTTaGCACGCAAAGGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: KAKFMYISLRLKCSPGNAGISQV*HAKAAQ
Trigger: CTGTGCAGCCTTTGCGTGCCAAACTTGTGAAATTCC...AGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp ACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGTGTAACTGCCTACTGGCCTaGCTACTGGATAGGTCCTAT +
Preference number: 4 (lower is better)
Translates to: TYRNTVFILQPQGQGGKCNCLLA*LLDRSY
Trigger: ATAGGACCTATCCAGTAGCCAGGCCAGTAGGCAGTT...ACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CGGAGGATTTTATTACTCACCATTAATGGTAGTGAAATGCCCTTCGGTGGATACTCACAGGCCCACTTATaGCACTTGCAGTTTGGGATT +
Preference number: 4 (lower is better)
Translates to: RRILLLTINGSEMPFGGYSQAHL*HLQFGI
Trigger: AATCCCAAACTGCAAGTGCCATAAGTGGGCCTGTGA...GTATCCACCGAAGGGCATTTCACTACCATTAATGGTGAGTAATAAAATCCTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CCA 90 bp CTCACAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTCACAGGCCCACTTATaGCACTTGCAGTTTGGGATT +
Preference number: 4 (lower is better)
Translates to: LTKLWRYDCCSIKISGEMSQAHL*HLQFGI
Trigger: AATCCCAAACTGCAAGTGCCATAAGTGGGCCTGTGA...CATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTTATCACTCCGTCTAAAATaGAGTCCCGGAAACGCTCCA +
Preference number: 4 (lower is better)
Translates to: QSCGDMTAAQLRFLVKCLSLRLK*SPGNAP
Trigger: TGGAGCGTTTCCGGGACTGCATTTTAGACGGAGTGA...TAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CGGAGGATTTTATTACTCACCATTAATGGTAGTGAAATGCCCTTCGGTGGATACCATGACACACCATACTaGTTTTCCAAAACACACGGG +
Preference number: 4 (lower is better)
Translates to: RRILLLTINGSEMPFGGYHDTPY*FSKTHG
Trigger: CCCGTGTGTTTTGGAAAAGCAGTATGGTGTGTCATG...GTATCCACCGAAGGGCATTTCACTACCATTAATGGTGAGTAATAAAATCCTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR TCA 90 bp CAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTTATGGAAAATTTGTCCTTaGCGCTGTCACTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: QSCGDMTAAQLRFLVKCLWKICP*RCHSSL
Trigger: CAGGGATGAGTGACAGCGTCAAGGACAAATTTTCCA...TAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000497691.5
3UTR CAA 72 bp CTACTGGATAGGTCCTATTCTGTACATAATGGGGGTTaGTTGACAGGTGGCTTTATAGCAAGTACTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LLDRSYSVHNGG*LTGGFIASTPK
Trigger: TTTTGGAGTACTTGCTATAAAGCCACCTGTCAACAAACCCCCATTATGTACAGAATAGGACCTATCCAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CCATACACAGACTCTAGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAACTTGCAGTTTGGGATTaGTCATTTGGCTCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: PYTDSSKSQIHVHFTPSKLAVWD*SFGSRK
Trigger: CTTCCTAGAGCCAAATGAGCAATCCCAAACTGCAAG...TTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCTAGAGTCTGTGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CCATACACAGACTCTAGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAATGGCGATATGACTGCTaGTCAATTAAGATTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PYTDSSKSQIHVHFTPSKWRYDC*SIKISG
Trigger: ACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCA...TTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCTAGAGTCTGTGTATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR GCA 90 bp CCATACACAGACTCTAGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAACTGTGGCGATATGACTaGTGCTCAATTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: PYTDSSKSQIHVHFTPSKLWRYD*CSIKIS
Trigger: AGAAATCTTAATTGAGCAGCAGTCATATCGCCACAG...TTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCTAGAGTCTGTGTATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS GCA 90 bp CCGGCCCGCGCCCTTGCCGGCGGTTCAGGGCCCTGCGGGCGGCGGTaGGGGCAAAGGCTGCTGCTCCCGGGGTGGCCGCGCTGTATTTCT +
Preference number: 5 (lower is better)
Translates to: PARALAGGSGPCGRR*GQRLLLPGWPRCIS
Trigger: AGAAATACAGCGCGGCCACCCCGGGAGCAGCAGCCTTTGCCCGCACCGCCGCCCGCAGGGCCCTGAACCGCCGGCAAGGGCGCGGGCCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS CCA 90 bp GGGCCCTGCGGGCGGCGGTGCGGGCAAAGGCTGCTGCTCCCGGGGTaGCCGCGCTGTATTTCTCCGACTTCGGGCGCCTCCCGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: GPCGRRCGQRLLLPG*PRCISPTSGASRKP
Trigger: CGGCTTCCGGGAGGCGCCCGAAGTCGGAGAAATACAGCGCGGCCACCCCGGGAGCAGCAGCCTTTGCCCGCACCGCCGCCCGCAGGGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406686.8
CDS GCA 90 bp GGGATGGCAGGGGTGGTGTGTCGCCTCCGTCCGCGCCGCTGCTGTTaGTCCGGTTGCCCGCAGCCTCCCAGGGGGCAGTGGCGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: GMAGVVCRLRPRRCC*SGCPQPPRGQWRRG
Trigger: CCCCCTTCGCCACTGCCCCCTGGGAGGCTGCGGGCAACCGGAGCAACAGCAGCGGCGCGGACGGAGGCGACACACCACCCCTGCCATCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380298.2
ENST00000406686.8
ENST00000436008.6
CDS GCA 90 bp CCGGCGGTTCAGGGCCCTGCGGGCGGCGGTGCGGGCAAAGGCTGCTaGTCCCGGGGTGGCCGCGCTGTATTTCTCCGACTTCGGGCGCCT +
Preference number: 5 (lower is better)
Translates to: PAVQGPAGGGAGKGC*SRGGRAVFLRLRAP
Trigger: AGGCGCCCGAAGTCGGAGAAATACAGCGCGGCCACCCCGGGAGCAGCAGCCTTTGCCCGCACCGCCGCCCGCAGGGCCCTGAACCGCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GTGTGTCCTGCCCGGGGCCGGGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCGGGAGGCTGGTCCAGTaGCCCATGTCCCCGCCCCGG +
Preference number: 5 (lower is better)
Translates to: VCPARGRAFRKHVQSHQPGRLVQ*PMSPPR
Trigger: CCGGGGCGGGGACATGGGCAACTGGACCAGCCTCCC...GGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCAGGACACAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CAA 90 bp GTGTGTCCTGCCCGGGGCCGGGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCCTGCTGTTGCTCCGGTaGCCCGCAGCCTCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: VCPARGRAFRKHVQSHQPLLLLR*PAASQG
Trigger: CCCCTGGGAGGCTGCGGGCAACCGGAGCAACAGCAG...GGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCAGGACACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CAA 90 bp AGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATGGGAGGCTGGTCCAGTaGCCCATGTCCCCGCCCCGG +
Preference number: 5 (lower is better)
Translates to: SRVPSPQRDRPWPWSLWHGRLVQ*PMSPPR
Trigger: CCGGGGCGGGGACATGGGCAACTGGACCAGCCTCCC...ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GCAGTGGCTGCTCCCCCTTCTTGTGCGGCAGCAGCGGCTGGCGCGTGTAGTGCTGGCTGCTCCCCCTTCTaGTGCGGCAGCAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: AVAAPPSCAAAAAGACSAGCSPF*CGSSGW
Trigger: CCAGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCC...AGCACTACACGCGCCAGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCCACTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CAA 90 bp GGGTTCCGCAGGCCGGGCTACATGGCCTTCATGCCGTTGGCCGTGGCACCCTCGATGGCCTTCATGCCGTaGGCCGTGGCACCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: GFRRPGYMAFMPLAVAPSMAFMP*AVAPSG
Trigger: GCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCAT...CGAGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS GCA 90 bp GCTGACCACGTTCTGGACGAGGCCGGCGCGGATGCCGTAGTCCCATaGGCGGCAGTCACAGTTGGAGGCGTTGTCCCCCTTGTCCGGAGG +
Preference number: 5 (lower is better)
Translates to: ADHVLDEAGADAVVP*AAVTVGGVVPLVRR
Trigger: CCTCCGGACAAGGGGGACAACGCCTCCAACTGTGACTGCCGCGCATGGGACTACGGCATCCGCGCCGGCCTCGTCCAGAACGTGGTCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380298.2
ENST00000406686.8
ENST00000436008.6
ENST00000485307.5
CDS-3UTR CAA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGGCCAGCTCGGTGCCTTaGCCGGCCCCGCGGCACCAG +
Preference number: 5 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGASSVP*PAPRHQ
Trigger: CTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGGC...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGGCGCTGTGCAGAGTGTATCCGCGCCGCTGCTGTaGCTCCGGTTGCCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: GLQEACAVAPAQGAVQSVSAPLL*LRLPAA
Trigger: GGCTGCGGGCAACCGGAGCAACAGCAGCGGCGCGGA...TACACTCTGCACAGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CAA 90 bp GCCAGGAGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTCCTTGAGCTCGGCGTaGGTGAGCAGCAGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: ARSRVPSPQRDRPWPWSLSLSSA*VSSSGC
Trigger: GCAGCCACTGCTGCTCACCAACGCCGAGCTCAAGGA...CAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCTCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GAACCACAAGCTGCAACTAGTGGGAAGTGTGGGGATTGTGTGTCCTGCCCGGGGGCCAGCTCGGTGCCTTaGCCGGCCCCGCGGCACCAG +
Preference number: 5 (lower is better)
Translates to: EPQAATSGKCGDCVSCPGASSVP*PAPRHQ
Trigger: CTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGGC...CCCCGGGCAGGACACACAATCCCCACACTTCCCACTAGTTGCAGCTTGTGGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CAA 90 bp GGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTGGTTCTCACTGCCTCTaGGGCGCCTCGGGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: GQVLTASWAPRGWVQQPPGSHCL*GASGLG
Trigger: ACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACC...AGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS GCA 90 bp TGGGGATTGTGTGTCCTGCCCGGGGCCGGGCCTTCAGGAAGCATGTaGAGTCGCACCAGCCCAGGGCGCTGTGCAGAGTGTACTCACGAC +
Preference number: 5 (lower is better)
Translates to: WGLCVLPGAGPSGSM*SRTSPGRCAECTHD
Trigger: GTCGTGAGTACACTCTGCACAGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCGGCCCCGGGCAGGACACACAATCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380298.2
ENST00000433689.2
CDS CCA 90 bp GCCAGCTCGGTGCCTTTGCCGGCCCCGCGGCACCAGAAGTTGGGCTaGTCCAGGAGGAACGAGTCCGAGAACTGGCTGAAGCCGATGAAC +
Preference number: 5 (lower is better)
Translates to: ASSVPLPAPRHQKLG*SRRNESENWLKPMN
Trigger: GTTCATCGGCTTCAGCCAGTTCTCGGACTCGTTCCTCCTGGACCAGCCCAACTTCTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380298.2
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GTGGCCCACAGGCTGAAGGTTGCCCACCCCTCGCCTAGAAGAGATAGGGGGACTGAGGCGTTGTCCCCCTaGTCCGGAGGGGATGGCAGG +
Preference number: 5 (lower is better)
Translates to: VAHRLKVAHPSPRRDRGTEALSP*SGGDGR
Trigger: CCTGCCATCCCCTCCGGACAAGGGGGACAACGCCTC...AGTCCCCCTATCTCTTCTAGGCGAGGGGTGGGCAACCTTCAGCCTGTGGGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CAA 90 bp GGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTTCACAGTTGGAGGCGTaGTCCCCCTTGTCCGGAGGG +
Preference number: 5 (lower is better)
Translates to: GQVLTASWAPRGWVQQPPSQLEA*SPLSGG
Trigger: CCCTCCGGACAAGGGGGACAACGCCTCCAACTGTGA...AGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CAA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCGCGCGGCAGTCACAGTaGGAGGCGTTGTCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPARQSQ*EALSPL
Trigger: CAAGGGGGACAACGCCTCCAACTGTGACTGCCGCGC...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTCAGCGCGGCAGTCACAGTaGGAGGCGTTGTCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: PGSHCLLGASGLGPTATSARQSQ*EALSPL
Trigger: CAAGGGGGACAACGCCTCCAACTGTGACTGCCGCGC...TGAGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CAA 90 bp GCCCCACCTCTGTGCTATGCGAGTGACTGCAAGCAGGAAGCTGGCCCAGGAAGGATGGCCTTCATGCCGTaGGCCGTGGCACCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: APPLCYASDCKQEAGPGRMAFMP*AVAPSG
Trigger: GCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCAT...CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp CCGGGTTCCGCAGGCCGGGCTACATGGCCTTCATGCCGTTGGCCGTGGCACCCTTCCGACCCGCGCTCCTaGGACTTTTGGAAAGACAGG +
Preference number: 5 (lower is better)
Translates to: PGSAGRATWPSCRWPWHPSDPRS*DFWKDR
Trigger: CCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGA...AGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS TCA 90 bp CAAAGGTGCGAGTGCCGTGGCTGGGAGCAGGAGTTCTGGAGCCCATaGGCCTGGGCTAGAATCCTGGCCCCCGCCCACCAGCTTCACTTC +
Preference number: 5 (lower is better)
Translates to: QRCECRGWEQEFWSP*AWARILAPAHQLHF
Trigger: GAAGTGAAGCTGGTGGGCGGGGGCCAGGATTCTAGCCCAGGCTCATGGGCTCCAGAACTCCTGCTCCCAGCCACGGCACTCGCACCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482874.1
CDS-3UTR CAA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCGGCTGCTCCCCCTTCTaGTGCGGCAGCAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: QVVPAQELPVHEGLFCWSGCSPF*CGSSGW
Trigger: CCAGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCC...GCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp TCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCATCCTTGAGCTCGGCGTaGGTGAGCAGCAGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: SHLPRGTGHGPGHCGIFPSLSSA*VSSSGC
Trigger: GCAGCCACTGCTGCTCACCAACGCCGAGCTCAAGGA...TGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GCCAGGAGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGGAGGCAGGGGCAGCGTaGAGCTTTGGTGAGTTATTG +
Preference number: 5 (lower is better)
Translates to: ARSRVPSPQRDRPWPWSLEAGAA*SFGELL
Trigger: CAATAACTCACCAAAGCTCAACGCTGCCCCTGCCTC...CAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCTCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp AGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATGGTGGGAGGGTCAAGTaGAAACAGTGGGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: SRVPSPQRDRPWPWSLWHGGRVK*KQWVPA
Trigger: CGCAGGCACCCACTGTTTCAACTTGACCCTCCCACC...ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS CCA 90 bp CGGCACCAGAAGTTGGGCTGGTCCAGGAGGAACGAGTCCGAGAACTaGCTGAAGCCGATGAACAGCGCCGGGATCCAGGTGAGCAGCACG +
Preference number: 5 (lower is better)
Translates to: RHQKLGWSRRNESEN*LKPMNSAGIQVSST
Trigger: CGTGCTGCTCACCTGGATCCCGGCGCTGTTCATCGGCTTCAGCCAGTTCTCGGACTCGTTCCTCCTGGACCAGCCCAACTTCTGGTGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380298.2
ENST00000406686.8
ENST00000436008.6
CDS CCA 90 bp ACCTGCCAATCCCGGCACAGGGCGGCTAGCCCAGGCATGAGGAACTaGCCCGCCATGGCCACGAAGCTCGCCACCATCGTAATCATGAAC +
Preference number: 5 (lower is better)
Translates to: TCQSRHRAASPGMRN*PAMATKLATIVIMN
Trigger: GTTCATGATTACGATGGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCTGGGCTAGCCGCCCTGTGCCGGGATTGGCAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000380298.2
ENST00000380302.8
ENST00000406686.8
ENST00000433689.2
ENST00000436008.6
ENST00000467177.5
ENST00000485307.5
ENST00000490273.5
ENST00000496753.1
ENST00000497691.5
CDS CCA 90 bp TCCTGCCAATCCCGGCACAGGGCGGCTAGCCCAGGCATGAGGAACTaGCCCGCCATGGCCACGAAGCTCGCCACCATCGTAATCATGAAC +
Preference number: 5 (lower is better)
Translates to: SCQSRHRAASPGMRN*PAMATKLATIVIMN
Trigger: GTTCATGATTACGATGGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCTGGGCTAGCCGCCCTGTGCCGGGATTGGCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467144.5
CDS-3UTR CAA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAAGCCAGCTCGGTGCCTTaGCCGGCCCCGCGGCACCAG +
Preference number: 5 (lower is better)
Translates to: ACARGTFLLEPIWERRNKASSVP*PAPRHQ
Trigger: CTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGGC...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCGAGGCGTTGTCCCCCTaGTCCGGAGGGGATGGCAGG +
Preference number: 5 (lower is better)
Translates to: QVVPAQELPVHEGLFCWSEALSP*SGGDGR
Trigger: CCTGCCATCCCCTCCGGACAAGGGGGACAACGCCTC...GCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGGCGCTGTGCAGAGTGTATCACAGTTGGAGGCGTaGTCCCCCTTGTCCGGAGGG +
Preference number: 5 (lower is better)
Translates to: GLQEACAVAPAQGAVQSVSQLEA*SPLSGG
Trigger: CCCTCCGGACAAGGGGGACAACGCCTCCAACTGTGA...TACACTCTGCACAGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CAA 90 bp AGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATACGATGCAGACCTTCTaGGGCCTCCGGGAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: SRVPSPQRDRPWPWSLWHTMQTF*GLRESS
Trigger: AGAGCTTTCCCGGAGGCCCAAGAAGGTCTGCATCGT...ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTACGATGCAGACCTTCTaGGGCCTCCGGGAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: GQVLTASWAPRGWVQQPPTMQTF*GLRESS
Trigger: AGAGCTTTCCCGGAGGCCCAAGAAGGTCTGCATCGT...AGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CAA 90 bp CCAGGGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCTACTTTCCAATCAGGTaGAGGAGGCCGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PGPGSHCLLGASGLGPTAYFPIR*RRPSCR
Trigger: CCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGTA...GGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS GCA 90 bp CGGGCCTTCAGGAAGCATGTGCAGTCGCACCAGCCCAGGGCGCTGTaGAGAGTGTACTCACGACCAGTAGAGCAGCATGAGCAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: RAFRKHVQSHQPRAL*RVYSRPVEQHEQEG
Trigger: CCCTTCCTGCTCATGCTGCTCTACTGGTCGTGAGTACACTCTGCACAGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCTGAAGGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380298.2
ENST00000433689.2
CDS-3UTR CAA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATCCGCGCCGCTGCTGTaGCTCCGGTTGCCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGSAPLL*LRLPAA
Trigger: GGCTGCGGGCAACCGGAGCAACAGCAGCGGCGCGGA...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAATGGCCTTCATGCCGTaGGCCGTGGCACCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: LLRPALLGLLERQDFPTPMAFMP*AVAPSG
Trigger: GCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCAT...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp AGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATATTTCCCCACACCAGTaGAGAGGCTCAGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: SRVPSPQRDRPWPWSLWHISPHQ*RGSAWL
Trigger: CAGCCAAGCTGAGCCTCTCAACTGGTGTGGGGAAAT...ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GCCAGGAGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGGAGGCTGGAGGTCATTaGGACTCACCTATGAGGAAT +
Preference number: 5 (lower is better)
Translates to: ARSRVPSPQRDRPWPWSLEAGGH*DSPMRN
Trigger: ATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC...CAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCAGATGCGTATCAGGCTaGGGTGGGTCCTGCCACCTT +
Preference number: 5 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPRCVSG*GGSCHL
Trigger: AAGGTGGCAGGACCCACCCAAGCCTGATACGCATCT...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS CCA 90 bp TGGAGCCAGGGACTCGTCTTTGATTTCCGAGAAGCCGGCGTCCCCTaGGGTGTCTCCCATGACGCACCTTATCACCGTCGGGGTGATCTC +
Preference number: 5 (lower is better)
Translates to: WSQGLVFDFREAGVP*GVSHDAPYHRRGDL
Trigger: GAGATCACCCCGACGGTGATAAGGTGCGTCATGGGAGACACCCCAGGGGACGCCGGCTTCTCGGAAATCAAAGACGAGTCCCTGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS CCA 90 bp CCAGAGCCAGAGACAGAGCTGACGCTGGTTAATCCCACACCAGCCTaGAGCCAGGGACTCGTCTTTGATTTCCGAGAAGCCGGCGTCCCC +
Preference number: 5 (lower is better)
Translates to: PEPETELTLVNPTPA*SQGLVFDFREAGVP
Trigger: GGGGACGCCGGCTTCTCGGAAATCAAAGACGAGTCCCTGGCTCCAGGCTGGTGTGGGATTAACCAGCGTCAGCTCTGTCTCTGGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CAA 90 bp TCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCGAGGCGTTGTCCCCCTaGTCCGGAGGGGATGGCAGG +
Preference number: 5 (lower is better)
Translates to: SDTDIFPGPRVAPCSPFLEALSP*SGGDGR
Trigger: CCTGCCATCCCCTCCGGACAAGGGGGACAACGCCTC...GAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CAA 90 bp CACCCCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCACACAAGATCCCACTaGCTGACCACGTTCTGGACG +
Preference number: 5 (lower is better)
Translates to: HPWLRVRSLVCKPVPKLPHTRSH*LTTFWT
Trigger: CGTCCAGAACGTGGTCAGCAAGTGGGATCTTGTGTG...GGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCGGCTGCTCCCCCTTCTaGTGCGGCAGCAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: EFVSSDPRSLDFWKDRISGCSPF*CGSSGW
Trigger: CCAGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCC...GGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGAGGCTGCTCCCCCTTCTaGTGCGGCAGCAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGGCSPF*CGSSGW
Trigger: CCAGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCC...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp CCCGTTAGAAATGTTCTCAGGCAGGTTCTGGTCCCTGCTCTCGGGCAGCAGGAGTCCTTGAGCTCGGCGTaGGTGAGCAGCAGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: PVRNVLRQVLVPALGQQESLSSA*VSSSGC
Trigger: GCAGCCACTGCTGCTCACCAACGCCGAGCTCAAGGA...CTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAACATTTCTAACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CAA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGAGTGGGTCCTGCCACCTaGCTCACTTGGTACCGGATT +
Preference number: 5 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRVGPAT*LTWYRI
Trigger: AATCCGGTACCAAGTGAGCAAGGTGGCAGGACCCAC...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp AGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATGAACTCAGCGTAAGCTaGTGCTATGAACGAGCACCG +
Preference number: 5 (lower is better)
Translates to: SRVPSPQRDRPWPWSLWHELSVS*CYERAP
Trigger: CGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTC...ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp AGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTGGGCGCCTCGGGGTaGGGTCCAACAGCCACCTCA +
Preference number: 5 (lower is better)
Translates to: RRSDTDIFPGPRVAPCSPLGASG*GPTATS
Trigger: TGAGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAA...GGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CAA 90 bp GTGGCCCACAGGCTGAAGGTTGCCCACCCCTCGCCTAGAAGAGATAGGGGGACTCACACAAGATCCCACTaGCTGACCACGTTCTGGACG +
Preference number: 5 (lower is better)
Translates to: VAHRLKVAHPSPRRDRGTHTRSH*LTTFWT
Trigger: CGTCCAGAACGTGGTCAGCAAGTGGGATCTTGTGTG...AGTCCCCCTATCTCTTCTAGGCGAGGGGTGGGCAACCTTCAGCCTGTGGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CAA 90 bp CCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGACGATGCAGACCTTCTaGGGCCTCCGGGAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: PAQELPVHEGLFCWSQSGTMQTF*GLRESS
Trigger: AGAGCTTTCCCGGAGGCCCAAGAAGGTCTGCATCGT...CCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp CCAGGGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCAACGCGATGGAAAATTaGTCCTTGACGCTGTCACTC +
Preference number: 5 (lower is better)
Translates to: PGPGSHCLLGASGLGPTANAMEN*SLTLSL
Trigger: GAGTGACAGCGTCAAGGACAAATTTTCCATCGCGTT...GGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CAA 90 bp GCCATGTTTTCAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTATGGCCTTCATGCCGTaGGCCGTGGCACCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: AMFSSSAGTRAACARGTFMAFMP*AVAPSG
Trigger: GCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCAT...AAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTGAAAACATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS GCA 90 bp ATTCACCTCATACAGGCAGTCTCAGCTCCTCCAGAGAACAGCCGCTaGAGAGGGGATCGTGCCCCTTCCACTGCCCAGCAGCCACCAAAA +
Preference number: 5 (lower is better)
Translates to: IHLIQAVSAPPENSR*RGDRAPSTAQQPPK
Trigger: TTTTGGTGGCTGCTGGGCAGTGGAAGGGGCACGATCCCCTCTGCAGCGGCTGTTCTCTGGAGGAGCTGAGACTGCCTGTATGAGGTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496753.1
CDS CCA 90 bp CTGGCTCCGAACATCATCGGTTTCTGGGTGAAGGCGGCAGACACCTaGCAGCGCCCAAGGAATAAATCGCCCTTCCAGGTGTGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: LAPNIIGFWVKAADT*QRPRNKSPFQVWPS
Trigger: TGAAGGCCACACCTGGAAGGGCGATTTATTCCTTGGGCGCTGCCAGGTGTCTGCCGCCTTCACCCAGAAACCGATGATGTTCGGAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGCTGCTGTTGCTCCGGTaGCCCGCAGCCTCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLLLLLR*PAASQG
Trigger: CCCCTGGGAGGCTGCGGGCAACCGGAGCAACAGCAG...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGTCACAGTTGGAGGCGTaGTCCCCCTTGTCCGGAGGG +
Preference number: 5 (lower is better)
Translates to: PALLGLLERQDFPTPVERSQLEA*SPLSGG
Trigger: CCCTCCGGACAAGGGGGACAACGCCTCCAACTGTGA...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp AGCCGTGTCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATAACGCGATGGAAAATTaGTCCTTGACGCTGTCACTC +
Preference number: 5 (lower is better)
Translates to: SRVPSPQRDRPWPWSLWHNAMEN*SLTLSL
Trigger: GAGTGACAGCGTCAAGGACAAATTTTCCATCGCGTT...ATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp TCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCATTATTTCCAAAGAGTTaGTCTCCTCCGACCCGCGCT +
Preference number: 5 (lower is better)
Translates to: SHLPRGTGHGPGHCGIFPLFPKS*SPPTRA
Trigger: AGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAA...TGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp TCCCATCTCCCCAGAGGGACCGGCCATGGCCCTGGTCACTGTGGCATCTTCCCAGAGGCTGGAGGTCATTaGGACTCACCTATGAGGAAT +
Preference number: 5 (lower is better)
Translates to: SHLPRGTGHGPGHCGIFPEAGGH*DSPMRN
Trigger: ATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC...TGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGTGCCACCTTGCTCACTaGGTACCGGATTTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: CVSLPREVIPFVISERERCHLAH*VPDFPG
Trigger: CCCCGGGAAATCCGGTACCAAGTGAGCAAGGTGGCA...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCAGATGCGTATCAGGCTaGGGTGGGTCCTGCCACCTT +
Preference number: 5 (lower is better)
Translates to: REAGGHLDSPMRNLRSLPRCVSG*GGSCHL
Trigger: AAGGTGGCAGGACCCACCCAAGCCTGATACGCATCT...GGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS CCA 90 bp CATTATCACACACAAGATCCCAGTTCAGCTCCGGCCTCCAGCGCTTaGTGTCTGTGTCCCACGGGAGAGCTCCAGTTTCCTGCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: HYHTQDPSSAPASSA*CLCPTGELQFPAAD
Trigger: GTCAGCAGCAGGAAACTGGAGCTCTCCCGTGGGACACAGACACCAAGCGCTGGAGGCCGGAGCTGAACTGGGATCTTGTGTGTGATAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467177.5
CDS-3UTR CAA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAATCACAGTTGGAGGCGTaGTCCCCCTTGTCCGGAGGG +
Preference number: 5 (lower is better)
Translates to: ACARGTFLLEPIWERRNKSQLEA*SPLSGG
Trigger: CCCTCCGGACAAGGGGGACAACGCCTCCAACTGTGA...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CTGGCCAGTGCATTTGCAGATTTTTGGAGCTGGGTGATGGGCTCATTCCACTCTGCGCGGCAGTCACAGTaGGAGGCGTTGTCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: LASAFADFWSWVMGSFHSARQSQ*EALSPL
Trigger: CAAGGGGGACAACGCCTCCAACTGTGACTGCCGCGC...AGAGTGGAATGAGCCCATCACCCAGCTCCAAAAATCTGCAAATGCACTGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CAA 90 bp CTGGCCAGTGCATTTGCAGATTTTTGGAGCTGGGTGATGGGCTCATTCCACTCTTGGGAAGTGTGGGGATaGTGTGTCCTGCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: LASAFADFWSWVMGSFHSWEVWG*CVLPGA
Trigger: GGCCCCGGGCAGGACACACAATCCCCACACTTCCCA...AGAGTGGAATGAGCCCATCACCCAGCTCCAAAAATCTGCAAATGCACTGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CAA 90 bp GGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTTGGGTCCAACAGCCACCTATGGAAAATTTGTCCTaGACGCTGTCACTCATCCCT +
Preference number: 5 (lower is better)
Translates to: GQVLTASWAPRGWVQQPPMENLS*TLSLIP
Trigger: AGGGATGAGTGACAGCGTCAAGGACAAATTTTCCAT...AGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CAA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATCCTTGAGCTCGGCGTaGGTGAGCAGCAGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGSLSSA*VSSSGC
Trigger: GCAGCCACTGCTGCTCACCAACGCCGAGCTCAAGGA...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAATGGCCTTCATGCCGTaGGCCGTGGCACCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTMAFMP*AVAPSG
Trigger: GCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCAT...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp GCAGACTCAAACTGCTGGGTGGCCATTAGCCACCGGAGGGACTCGGGGAATATCATTTCCCCACACCAGTaGAGAGGCTCAGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: ADSNCWVAISHRRDSGNIISPHQ*RGSAWL
Trigger: CAGCCAAGCTGAGCCTCTCAACTGGTGTGGGGAAAT...GATATTCCCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CAA 90 bp GCAGACTCAAACTGCTGGGTGGCCATTAGCCACCGGAGGGACTCGGGGAATATCGAGGCAGGGGCAGCGTaGAGCTTTGGTGAGTTATTG +
Preference number: 5 (lower is better)
Translates to: ADSNCWVAISHRRDSGNIEAGAA*SFGELL
Trigger: CAATAACTCACCAAAGCTCAACGCTGCCCCTGCCTC...GATATTCCCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CAA 90 bp CAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCAAGCTGGTGCCCAAGTaGCTACAAAGTGGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: QVVPAQELPVHEGLFCWSKLVPK*LQSGAC
Trigger: GCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTT...GCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp ACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGGTGGGTCCTGCCACCTaGCTCACTTGGTACCGGATT +
Preference number: 5 (lower is better)
Translates to: TRAACARGTFLLEPIWERVGPAT*LTWYRI
Trigger: AATCCGGTACCAAGTGAGCAAGGTGGCAGGACCCAC...CCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CCTGGCTGCGTGTTCGGTCCCTGGTCTGTAAACCTGTGCCCAAGCTGCCCCAGAGCCCACTTATGGCACTaGCAGTTTGGGATTGCTCAT +
Preference number: 5 (lower is better)
Translates to: PGCVFGPWSVNLCPSCPRAHLWH*QFGIAH
Trigger: ATGAGCAATCCCAAACTGCAAGTGCCATAAGTGGGC...TCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp TCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCGCCAGGGACTCGTCTTaGATTTCCGAGAAGCCGGCG +
Preference number: 5 (lower is better)
Translates to: SDTDIFPGPRVAPCSPFLARDSS*ISEKPA
Trigger: CGCCGGCTTCTCGGAAATCAAAGACGAGTCCCTGGC...GAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS TCA 90 bp TCACACACAAGATCCCACTGGCTCCGAACATCATCGGTTTCTGGGTaGAGGCGGCAGACACCTGGCAGCGCCCAAGGAATAAATCGCCCT +
Preference number: 5 (lower is better)
Translates to: SHTRSHWLRTSSVSG*RRQTPGSAQGINRP
Trigger: AGGGCGATTTATTCCTTGGGCGCTGCCAGGTGTCTGCCGCCTTCACCCAGAAACCGATGATGTTCGGAGCCAGTGGGATCTTGTGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380302.8
ENST00000497691.5
CDS-3UTR CAA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTGCGCGGCAGTCACAGTaGGAGGCGTTGTCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFARQSQ*EALSPL
Trigger: CAAGGGGGACAACGCCTCCAACTGTGACTGCCGCGC...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GCCAGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCACACAAGATCCCACTaGCTGACCACGTTCTGGACG +
Preference number: 5 (lower is better)
Translates to: ARRSDTDIFPGPRVAPCSHTRSH*LTTFWT
Trigger: CGTCCAGAACGTGGTCAGCAAGTGGGATCTTGTGTG...GGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CAA 90 bp AGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCGGAGGATCAGCCTCTTaGCAGACTCAAACTGCTGGG +
Preference number: 5 (lower is better)
Translates to: RRSDTDIFPGPRVAPCSPGGSAS*QTQTAG
Trigger: CCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTCC...GGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CAA 90 bp GCCAGACGCTCAGACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCTCTGGTATCACACCCTaGATGTCGCCCTCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: ARRSDTDIFPGPRVAPCSSGITP*MSPSGF
Trigger: GAACCCTGAGGGCGACATCAAGGGTGTGATACCAGA...GGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTCTGAGCGTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS-3UTR CAA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGACGATGCAGACCTTCTaGGGCCTCCGGGAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: PALLGLLERQDFPTPVERTMQTF*GLRESS
Trigger: AGAGCTTTCCCGGAGGCCCAAGAAGGTCTGCATCGT...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp GGCATCTTCCCAGAGCAACTGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTTACTTTCCAATCAGGTaGAGGAGGCCGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GIFPEQLRLAAQGGDSICYFPIR*RRPSCR
Trigger: CCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGTA...ACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGAAATTTCCCCACACCAGTaGAGAGGCTCAGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: EAGGHLDSPMRNLRSLPEISPHQ*RGSAWL
Trigger: CAGCCAAGCTGAGCCTCTCAACTGGTGTGGGGAAAT...TTCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp CATAGAAGTTCTCCAGGAGCGGCACCTTCACCTCGTGGCCCATCATGCTCCTGGGCGCTCCTTGGACTTTaGGAAAGACAGGATTTCCCC +
Preference number: 5 (lower is better)
Translates to: HRSSPGAAPSPRGPSCSWALLGL*ERQDFP
Trigger: GGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGC...CCAGGAGCATGATGGGCCACGAGGTGAAGGTGCCGCTCCTGGAGAACTTCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CAA 90 bp CGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCTGGCCAAGAGTCTGCTaGCCCCTTGCTGTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: REAGGHLDSPMRNLRSLPWPRVC*PLAVSL
Trigger: TAAAGACACAGCAAGGGGCAAGCAGACTCTTGGCCA...GGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGCCCACAGGGAAGTGTaGCTGCTCTGGCAACATTTC +
Preference number: 5 (lower is better)
Translates to: LLRPALLGLLERQDFPTPAHREV*LLWQHF
Trigger: GAAATGTTGCCAGAGCAGCAACACTTCCCTGTGGGC...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATGCCACCTTGCTCACTaGGTACCGGATTTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGCHLAH*VPDFPG
Trigger: CCCCGGGAAATCCGGTACCAAGTGAGCAAGGTGGCA...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GACACTGACATATTTCCTGGGCCCAGAGTAGCTCCCTGTTCCCCCTTCCTCCTGGGTCTCTTAGCAGAGTaGGCAGCACAGGTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: DTDIFPGPRVAPCSPFLLGLLAE*AAQVLV
Trigger: CACCAGAACCTGTGCTGCCAACTCTGCTAAGAGACC...CAGGAGGAAGGGGGAACAGGGAGCTACTCTGGGCCCAGGAAATATGTCAGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS CCA 90 bp TTCTGTGTGAAGTGGAGGATCAGCCTCTTTGCAGACTCAAACTGCTaGGTGGCCATTAGCCACCGGAGGGACTCGGGGAATATCGACCAG +
Preference number: 5 (lower is better)
Translates to: FCVKWRISLFADSNC*VAISHRRDSGNIDQ
Trigger: CTGGTCGATATTCCCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTCCACTTCACACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000467177.5
ENST00000485307.5
ENST00000490273.5
ENST00000496753.1
CDS CCA 90 bp TTCTGTGTGAAGTGGAGGATCAGCCTCTTTGCAGACTCAAACTGCTaGGTGGCCATTAGCCACCGGAGGGACTCGGGGAATATCCTGCCA +
Preference number: 5 (lower is better)
Translates to: FCVKWRISLFADSNC*VAISHRRDSGNILP
Trigger: TGGCAGGATATTCCCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTCCACTTCACACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467144.5
CDS-3UTR CAA 90 bp TACATACAAATTTTCCCCAAAGGTACAACAGATGCGACACCATGCAGACACGCACTGCTGTTGCTCCGGTaGCCCGCAGCCTCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: YIQIFPKGTTDATPCRHALLLLR*PAASQG
Trigger: CCCCTGGGAGGCTGCGGGCAACCGGAGCAACAGCAG...TGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATTTGTATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CGGAGGATTTTATTACTCACCATTAATGGTAGTGAAATGCCCTTCGGTGGATACTCCGCGCCGCTGCTGTaGCTCCGGTTGCCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: RRILLLTINGSEMPFGGYSAPLL*LRLPAA
Trigger: GGCTGCGGGCAACCGGAGCAACAGCAGCGGCGCGGA...GTATCCACCGAAGGGCATTTCACTACCATTAATGGTGAGTAATAAAATCCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GAACCACAAGCTGCAACTAGTGGGAAGTGTGGGGATTGTGTGTCCTGCCCGGGGTGCATTTGCAGATTTTaGGAGCTGGGTGATGGGCTC +
Preference number: 5 (lower is better)
Translates to: EPQAATSGKCGDCVSCPGCICRF*ELGDGL
Trigger: GAGCCCATCACCCAGCTCCAAAAATCTGCAAATGCA...CCCCGGGCAGGACACACAATCCCCACACTTCCCACTAGTTGCAGCTTGTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380298.2
CDS-3UTR CAA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTTCTGGTATCACACCCTaGATGTCGCCCTCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPSGITP*MSPSGF
Trigger: GAACCCTGAGGGCGACATCAAGGGTGTGATACCAGA...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp GCCATGTTTTCAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTACGATGCAGACCTTCTaGGGCCTCCGGGAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: AMFSSSAGTRAACARGTFTMQTF*GLRESS
Trigger: AGAGCTTTCCCGGAGGCCCAAGAAGGTCTGCATCGT...AAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTGAAAACATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp GTGTCGGCGTGGTCCAGCCACTGGAAACACGTGGCCAAGAGTCTGCTTGCCCCTATGGAAAATTTGTCCTaGACGCTGTCACTCATCCCT +
Preference number: 5 (lower is better)
Translates to: VSAWSSHWKHVAKSLLAPMENLS*TLSLIP
Trigger: AGGGATGAGTGACAGCGTCAAGGACAAATTTTCCAT...AGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGCTGGACCACGCCGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp AGTGAGACTGCTCGCAACTTTCATCACTTAGCATATCCTTCCACAACACAGTACGGCTGCTCCCCCTTCTaGTGCGGCAGCAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: SETARNFHHLAYPSTTQYGCSPF*CGSSGW
Trigger: CCAGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCC...GTACTGTGTTGTGGAAGGATATGCTAAGTGATGAAAGTTGCGAGCAGTCTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp TCGGTTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGAAGTGGTGCCTGCCCTaGCCAAGGAGGCTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: SVGSHFIVSPRPETTISLKWCLP*PRRLSL
Trigger: AAGAGACAGCCTCCTTGGCAAGGGCAGGCACCACTT...CAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAACCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS GCA 90 bp TTCTTCTGTGTGAAGTGGAGGATCAGCCTCTTTGCAGACTCAAACTaGTGGGTGGCCATTAGCCACCGGAGGGACTCGGGGAATATCGAC +
Preference number: 5 (lower is better)
Translates to: FFCVKWRISLFADSN*WVAISHRRDSGNID
Trigger: GTCGATATTCCCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTCCACTTCACACAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000467177.5
ENST00000485307.5
ENST00000490273.5
ENST00000496753.1
CDS-3UTR CAA 90 bp AGTGAGACTGCTCGCAACTTTCATCACTTAGCATATCCTTCCACAACACAGTACGAGGCGTTGTCCCCCTaGTCCGGAGGGGATGGCAGG +
Preference number: 5 (lower is better)
Translates to: SETARNFHHLAYPSTTQYEALSP*SGGDGR
Trigger: CCTGCCATCCCCTCCGGACAAGGGGGACAACGCCTC...GTACTGTGTTGTGGAAGGATATGCTAAGTGATGAAAGTTGCGAGCAGTCTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAAGGAGGATCAGCCTCTTaGCAGACTCAAACTGCTGGG +
Preference number: 5 (lower is better)
Translates to: ACARGTFLLEPIWERRNKGGSAS*QTQTAG
Trigger: CCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTCC...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAATCTGGTATCACACCCTaGATGTCGCCCTCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: ACARGTFLLEPIWERRNKSGITP*MSPSGF
Trigger: GAACCCTGAGGGCGACATCAAGGGTGTGATACCAGA...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp CAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATACGATGCAGACCTTCTaGGGCCTCCGGGAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: QRVCLLRPALLGLLERQDTMQTF*GLRESS
Trigger: AGAGCTTTCCCGGAGGCCCAAGAAGGTCTGCATCGT...ATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp GAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCTACTTTCCAATCAGGTaGAGGAGGCCGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: EFVSSDPRSLDFWKDRISYFPIR*RRPSCR
Trigger: CCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGTA...GGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp AGGACACCAGCGCGATGCTGGCCGTGGTATAGTAGTCAGCATAGAAGTTCTCCATACTTTCCAATCAGGTaGAGGAGGCCGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RTPARCWPWYSSQHRSSPYFPIR*RRPSCR
Trigger: CCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGTA...TGGAGAACTTCTATGCTGACTACTATACCACGGCCAGCATCGCGCTGGTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CAA 90 bp TTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGAAGTCCGACCCGCGCTCCTaGGACTTTTGGAAAGACAGG +
Preference number: 5 (lower is better)
Translates to: LEVTSLSHPGPRPQFPWKSDPRS*DFWKDR
Trigger: CCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGA...CTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GCCATGTTTTCAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTGAGGCAGGGGCAGCGTaGAGCTTTGGTGAGTTATTG +
Preference number: 5 (lower is better)
Translates to: AMFSSSAGTRAACARGTFEAGAA*SFGELL
Trigger: CAATAACTCACCAAAGCTCAACGCTGCCCCTGCCTC...AAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTGAAAACATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGAACTCAGCGTAAGCTaGTGCTATGAACGAGCACCG +
Preference number: 5 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPELSVS*CYERAP
Trigger: CGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTC...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS GCA 90 bp CATAAAAAGAGCCAGCCCAAAGTGAGCTACAGAACAGACTTTTGCTaGCACAAAGGTGCGAGTGCCGTGGCTGGGAGCAGGAGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: HKKSQPKVSYRTDFC*HKGASAVAGSRSSG
Trigger: TCCAGAACTCCTGCTCCCAGCCACGGCACTCGCACCTTTGTGGCAGCAAAAGTCTGTTCTGTAGCTCACTTTGGGCTGGCTCTTTTTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482874.1
CDS GCA 90 bp CCACATAAAAAGAGCCAGCCCAAAGTGAGCTACAGAACAGACTTTTaGTGCCACAAAGGTGCGAGTGCCGTGGCTGGGAGCAGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: PHKKSQPKVSYRTDF*CHKGASAVAGSRSS
Trigger: AGAACTCCTGCTCCCAGCCACGGCACTCGCACCTTTGTGGCAGCAAAAGTCTGTTCTGTAGCTCACTTTGGGCTGGCTCTTTTTATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482874.1
CDS CCA 90 bp ATTATCACACACAAGATCCCACTGGCTCCGAACATCATCGGTTTCTaGGTGAAGGCGGCAGACACCTGGCAGCGCCCAAGGAATAAATCG +
Preference number: 5 (lower is better)
Translates to: IITHKIPLAPNIIGF*VKAADTWQRPRNKS
Trigger: CGATTTATTCCTTGGGCGCTGCCAGGTGTCTGCCGCCTTCACCCAGAAACCGATGATGTTCGGAGCCAGTGGGATCTTGTGTGTGATAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380302.8
ENST00000497691.5
CDS-3UTR CAA 90 bp ATCCAGCCTCTGCCTCTGACTACCTTTAAGACCAGGACTCGAAGCAGAGTGAGATCTGGTATCACACCCTaGATGTCGCCCTCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: IQPLPLTTFKTRTRSRVRSGITP*MSPSGF
Trigger: GAACCCTGAGGGCGACATCAAGGGTGTGATACCAGA...TCTCACTCTGCTTCGAGTCCTGGTCTTAAAGGTAGTCAGAGGCAGAGGCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CCGTTAGAAATGTTCTCAGGCAGGTTCTGGTCCCTGCTCTCGGGCAGCAGGAGGATGGAAAATTTGTCCTaGACGCTGTCACTCATCCCT +
Preference number: 5 (lower is better)
Translates to: PLEMFSGRFWSLLSGSRRMENLS*TLSLIP
Trigger: AGGGATGAGTGACAGCGTCAAGGACAAATTTTCCAT...CCTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAACATTTCTAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497691.5
CDS-3UTR CAA 90 bp GCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATAAAGCGCTCCTTGGACTTTaGGAAAGACAGGATTTCCCC +
Preference number: 5 (lower is better)
Translates to: ACARGTFLLEPIWERRNKALLGL*ERQDFP
Trigger: GGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGC...TTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCAGCGCTCCTTGGACTTTaGGAAAGACAGGATTTCCCC +
Preference number: 5 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSALLGL*ERQDFP
Trigger: GGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGC...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTTCCGACCCGCGCTCCTaGGACTTTTGGAAAGACAGG +
Preference number: 5 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFSDPRS*DFWKDR
Trigger: CCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGA...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp CTGTCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGAAGTGGTGCCTGCCCTaGCCAAGGAGGCTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: LSLSRLGCPTSFLRKCQEKWCLP*PRRLSL
Trigger: AAGAGACAGCCTCCTTGGCAAGGGCAGGCACCACTT...CTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCATCGAGAAGGGATGAGTaGGACAATGCCAGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: LLRPALLGLLERQDFPTPSRRDE*DNASKK
Trigger: CTTCTTACTGGCATTGTCCAACTCATCCCTTCTCGA...TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp ACAAGAGCTGCCTGTGCACGAGGGACTTTTCTGCTGGAGCCAATCTGGGAGAGGAGGAATTTCACAAGTTaGGCACGCAAAGGCTGCACA +
Preference number: 5 (lower is better)
Translates to: TRAACARGTFLLEPIWERRNFTS*ARKGCT
Trigger: TGTGCAGCCTTTGCGTGCCAAACTTGTGAAATTCCT...CCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCACTTATGGCACTaGCAGTTTGGGATTGCTCAT +
Preference number: 5 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPAHLWH*QFGIAH
Trigger: ATGAGCAATCCCAAACTGCAAGTGCCATAAGTGGGC...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCCCACACCAGTTGAGAGGCACACAAGATCCCACTaGGAAATTAGGTTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: PALLGLLERQDFPTPVERHTRSH*EIRFQG
Trigger: CCCCTGGAACCTAATTTCCAAGTGGGATCTTGTGTG...CCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490273.5
CDS GCA 90 bp GCAGCCACCAAAAGAACAACAGGGCACTTGAGGTATCAGCAGTTCTaGCAGCCTGAGGATGTTGCTGTTTCACAGCTCCTGGGAGCAATT +
Preference number: 5 (lower is better)
Translates to: AATKRTTGHLRYQQF*QPEDVAVSQLLGAI
Trigger: AATTGCTCCCAGGAGCTGTGAAACAGCAACATCCTCAGGCTGGCAGAACTGCTGATACCTCAAGTGCCCTGTTGTTCTTTTGGTGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496753.1
CDS-3UTR CAA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACGGAGGATCAGCCTCTTaGCAGACTCAAACTGCTGGG +
Preference number: 5 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDGGSAS*QTQTAG
Trigger: CCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTCC...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp ATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACTCTGGTATCACACCCTaGATGTCGCCCTCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: ISKEFVSSDPRSLDFWKDSGITP*MSPSGF
Trigger: GAACCCTGAGGGCGACATCAAGGGTGTGATACCAGA...GTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp GGCATCTTCCCAGAGCAACTGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTATGGAAAATTTGTCCTaGACGCTGTCACTCATCCCT +
Preference number: 5 (lower is better)
Translates to: GIFPEQLRLAAQGGDSICMENLS*TLSLIP
Trigger: AGGGATGAGTGACAGCGTCAAGGACAAATTTTCCAT...ACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTAACGCGATGGAAAATTaGTCCTTGACGCTGTCACTC +
Preference number: 5 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPNAMEN*SLTLSL
Trigger: GAGTGACAGCGTCAAGGACAAATTTTCCATCGCGTT...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp ATCTCAGGTCTCGACGCATCTGTTAGCTGTGTACTCACAAAGCTGTGGCGATATTCCGACCCGCGCTCCTaGGACTTTTGGAAAGACAGG +
Preference number: 5 (lower is better)
Translates to: ISGLDASVSCVLTKLWRYSDPRS*DFWKDR
Trigger: CCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGA...ATATCGCCACAGCTTTGTGAGTACACAGCTAACAGATGCGTCGAGACCTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp GAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCCTTATTTCCAAAGAGTTaGTCTCCTCCGACCCGCGCT +
Preference number: 5 (lower is better)
Translates to: EFVSSDPRSLDFWKDRISLFPKS*SPPTRA
Trigger: AGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAA...GGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp GCCATGTTTTCAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTTTATTTCCAAAGAGTTaGTCTCCTCCGACCCGCGCT +
Preference number: 5 (lower is better)
Translates to: AMFSSSAGTRAACARGTFLFPKS*SPPTRA
Trigger: AGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAA...AAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTGAAAACATGGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp TGCTATGAACGAGCACCGTCAGAGAATTCCCACCCACACGTACAGAAACACAGTGAGGCAGGGGCAGCGTaGAGCTTTGGTGAGTTATTG +
Preference number: 5 (lower is better)
Translates to: CYERAPSENSHPHVQKHSEAGAA*SFGELL
Trigger: CAATAACTCACCAAAGCTCAACGCTGCCCCTGCCTC...ACTGTGTTTCTGTACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAAAGCTGGTGCCCAAGTaGCTACAAAGTGGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTKLVPK*LQSGAC
Trigger: GCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTT...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp AGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTCTTGGAAGTCACTTCATaGTCTCACCCAGGCCCGAGA +
Preference number: 5 (lower is better)
Translates to: RVCLLRPALLGLLERQDFLEVTS*SHPGPR
Trigger: TCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAA...GAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGAGAGTCTGCTTGCCCCTaGCTGTGTCTTTACACATCT +
Preference number: 5 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGESACP*LCLYTS
Trigger: AGATGTGTAAAGACACAGCAAGGGGCAAGCAGACTC...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp TGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTGATCAGTGAGAGGGAGAGGCATAATGGGGGTTTGTaGACAGGTGGCTTTATAGCA +
Preference number: 5 (lower is better)
Translates to: CVSLPREVIPFVISERERHNGGL*TGGFIA
Trigger: TGCTATAAAGCCACCTGTCAACAAACCCCCATTATG...CCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTGCCCGAACATAATGGGGGTTTGTaGACAGGTGGCTTTATAGCA +
Preference number: 5 (lower is better)
Translates to: EAGGHLDSPMRNLRSLPEHNGGL*TGGFIA
Trigger: TGCTATAAAGCCACCTGTCAACAAACCCCCATTATG...TTCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CTGTCTCTTAGTCGCCTTGGGTGTCCTACAAGTTTCCTCCGAAAATGCCAAGAGGCCCACAGGGAAGTGTaGCTGCTCTGGCAACATTTC +
Preference number: 5 (lower is better)
Translates to: LSLSRLGCPTSFLRKCQEAHREV*LLWQHF
Trigger: GAAATGTTGCCAGAGCAGCAACACTTCCCTGTGGGC...CTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp TCGGTTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGTTTGGGATTGCTCATTaGGCTCTAGGAAGCGGTGGT +
Preference number: 5 (lower is better)
Translates to: SVGSHFIVSPRPETTISLFGIAH*ALGSGG
Trigger: ACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAA...CAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAACCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GCCAGGCTGTCCAGAAAAGCTGGTGCCCAAGTTGCTACAAAGTGGTGCCTGCCCTTAGAGAAGAGAGTTTaGGGTTACCAGTCTTTCCTC +
Preference number: 5 (lower is better)
Translates to: ARLSRKAGAQVATKWCLPLEKRV*GYQSFL
Trigger: GAGGAAAGACTGGTAACCCAAAACTCTCTTCTCTAA...GGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGAAACGCGATGGAAAATTaGTCCTTGACGCTGTCACTC +
Preference number: 5 (lower is better)
Translates to: PKSLSPPTRAPWTFGKTGNAMEN*SLTLSL
Trigger: GAGTGACAGCGTCAAGGACAAATTTTCCATCGCGTT...TCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTGCGCTCCTTGGACTTTaGGAAAGACAGGATTTCCCC +
Preference number: 5 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTALLGL*ERQDFP
Trigger: GGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGC...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp CCTTCGAGAGGCTGGAGGTCATTTGGACTCACCTATGAGGAATCTCCGCTCCCTTTCTTTCAATTTGTCTaGATGCCTTCGAGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: PSRGWRSFGLTYEESPLPFFQFV*MPSRGW
Trigger: CCAGCCTCTCGAAGGCATCAAGACAAATTGAAAGAA...AGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp GCCATGTTTTCAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTTCGAGAAGGGATGAGTaGGACAATGCCAGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: AMFSSSAGTRAACARGTFSRRDE*DNASKK
Trigger: CTTCTTACTGGCATTGTCCAACTCATCCCTTCTCGA...AAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTGAAAACATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GCCATGTTTTCAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTAGGAATTTCACAAGTTaGGCACGCAAAGGCTGCACA +
Preference number: 5 (lower is better)
Translates to: AMFSSSAGTRAACARGTFRNFTS*ARKGCT
Trigger: TGTGCAGCCTTTGCGTGCCAAACTTGTGAAATTCCT...AAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTGAAAACATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp ACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGTGTTCCTTGAGCTCGGCGTaGGTGAGCAGCAGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: TYRNTVFILQPQGQGGKCSLSSA*VSSSGC
Trigger: GCAGCCACTGCTGCTCACCAACGCCGAGCTCAAGGA...ACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGAGGCTGGAGGTCATTaGGACTCACCTATGAGGAAT +
Preference number: 5 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTEAGGH*DSPMRN
Trigger: ATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp TGCTATGAACGAGCACCGTCAGAGAATTCCCACCCACACGTACAGAAACACAGTGAGTCTGCTTGCCCCTaGCTGTGTCTTTACACATCT +
Preference number: 5 (lower is better)
Translates to: CYERAPSENSHPHVQKHSESACP*LCLYTS
Trigger: AGATGTGTAAAGACACAGCAAGGGGCAAGCAGACTC...ACTGTGTTTCTGTACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GGCATCTTCCCAGAGCAACTGCGTCTCGCTGCCCAGGGAGGTGATTCCATTTGTCATTTCATAAAGGTGTaGCTCAACAGCTTCAGGTAT +
Preference number: 5 (lower is better)
Translates to: GIFPEQLRLAAQGGDSICHFIKV*LNSFRY
Trigger: ATACCTGAAGCTGTTGAGCAACACCTTTATGAAATG...ACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp TTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACATTTGGGATTGCTCATTaGGCTCTAGGAAGCGGTGGT +
Preference number: 5 (lower is better)
Translates to: FPKSLSPPTRAPWTFGKTFGIAH*ALGSGG
Trigger: ACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAA...TGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CCCACACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGACACACAAGATCCCACTaGCTGACCACGTTCTGGACG +
Preference number: 5 (lower is better)
Translates to: PTRTETQFLYYNLKDREGHTRSH*LTTFWT
Trigger: CGTCCAGAACGTGGTCAGCAAGTGGGATCTTGTGTG...TCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGTGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp AGTGAGACTGCTCGCAACTTTCATCACTTAGCATATCCTTCCACAACACAGTACGGAGGATCAGCCTCTTaGCAGACTCAAACTGCTGGG +
Preference number: 5 (lower is better)
Translates to: SETARNFHHLAYPSTTQYGGSAS*QTQTAG
Trigger: CCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTCC...GTACTGTGTTGTGGAAGGATATGCTAAGTGATGAAAGTTGCGAGCAGTCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp AGTGAGACTGCTCGCAACTTTCATCACTTAGCATATCCTTCCACAACACAGTACTACTTTCCAATCAGGTaGAGGAGGCCGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SETARNFHHLAYPSTTQYYFPIR*RRPSCR
Trigger: CCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGTA...GTACTGTGTTGTGGAAGGATATGCTAAGTGATGAAAGTTGCGAGCAGTCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp TTGGAAGTCACTTCATTGTCTCACCCAGGCCCGAGACCACAATTTCCCTGGAAGATGGAAAATTTGTCCTaGACGCTGTCACTCATCCCT +
Preference number: 5 (lower is better)
Translates to: LEVTSLSHPGPRPQFPWKMENLS*TLSLIP
Trigger: AGGGATGAGTGACAGCGTCAAGGACAAATTTTCCAT...CTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTAACGCGATGGAAAATTaGTCCTTGACGCTGTCACTC +
Preference number: 5 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTNAMEN*SLTLSL
Trigger: GAGTGACAGCGTCAAGGACAAATTTTCCATCGCGTT...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp ATCTCAGGTCTCGACGCATCTGTTAGCTGTGTACTCACAAAGCTGTGGCGATATGAGGCTGGAGGTCATTaGGACTCACCTATGAGGAAT +
Preference number: 5 (lower is better)
Translates to: ISGLDASVSCVLTKLWRYEAGGH*DSPMRN
Trigger: ATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTC...ATATCGCCACAGCTTTGTGAGTACACAGCTAACAGATGCGTCGAGACCTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp AGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAAGGTGGGAGGGTCAAGTaGAAACAGTGGGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: SKSQIHVHFTPSKMQSRKGGRVK*KQWVPA
Trigger: CGCAGGCACCCACTGTTTCAACTTGACCCTCCCACC...TTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTATGGCACTTGCAGTTaGGGATTGCTCATTTGGCTC +
Preference number: 5 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTYGTCS*GLLIWL
Trigger: GAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATA...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GCCATGTTTTCAAGTAGTGCCGGCACAAGAGCTGCCTGTGCACGAGGGACTTTTTTAGAGAAGAGAGTTTaGGGTTACCAGTCTTTCCTC +
Preference number: 5 (lower is better)
Translates to: AMFSSSAGTRAACARGTFLEKRV*GYQSFL
Trigger: GAGGAAAGACTGGTAACCCAAAACTCTCTTCTCTAA...AAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTGAAAACATGGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp AAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGATGGAAAATTTGTCCTaGACGCTGTCACTCATCCCT +
Preference number: 5 (lower is better)
Translates to: KGYFQRVCLLRPALLGLLMENLS*TLSLIP
Trigger: AGGGATGAGTGACAGCGTCAAGGACAAATTTTCCAT...CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp TTGAAAGGGTTATTTCCAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTCTTTCAATTTGTCTaGATGCCTTCGAGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LKGLFPKSLSPPTRAPWTFFQFV*MPSRGW
Trigger: CCAGCCTCTCGAAGGCATCAAGACAAATTGAAAGAA...AGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp AAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATTTTTCTTTCAATTTGTCTaGATGCCTTCGAGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: KSLSPPTRAPWTFGKTGFFFQFV*MPSRGW
Trigger: CCAGCCTCTCGAAGGCATCAAGACAAATTGAAAGAA...AAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp AGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAATCTGGTATCACACCCTaGATGTCGCCCTCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: SKSQIHVHFTPSKMQSRKSGITP*MSPSGF
Trigger: GAACCCTGAGGGCGACATCAAGGGTGTGATACCAGA...TTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp AGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAAATGCAGTCCCGGAAAATTTCCCCACACCAGTaGAGAGGCTCAGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: SKSQIHVHFTPSKMQSRKISPHQ*RGSAWL
Trigger: CAGCCAAGCTGAGCCTCTCAACTGGTGTGGGGAAAT...TTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CGGAGGATTTTATTACTCACCATTAATGGTAGTGAAATGCCCTTCGGTGGATACGCGCTCCTTGGACTTTaGGAAAGACAGGATTTCCCC +
Preference number: 5 (lower is better)
Translates to: RRILLLTINGSEMPFGGYALLGL*ERQDFP
Trigger: GGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGC...GTATCCACCGAAGGGCATTTCACTACCATTAATGGTGAGTAATAAAATCCTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp GTGATGTCTGAGGTGACGGCCATCCAAGCTGGTGATCTTCATGGTGTGTGCTCACTTCCCTTACGAGGTTaGTTTTTGTTTTCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: VMSEVTAIQAGDLHGVCSLPLRG*FLFSFC
Trigger: ACAGAAAGAAAACAAAAACAAACCTCGTAAGGGAAG...TGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTTATACTTTCCAATCAGGTaGAGGAGGCCGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: QSCGDMTAAQLRFLVKCLYFPIR*RRPSCR
Trigger: CCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGTA...TAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000497691.5
CDS-3UTR CAA 90 bp ACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGTGTTGGCCAAGAGTCTGCTaGCCCCTTGCTGTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: TYRNTVFILQPQGQGGKCWPRVC*PLAVSL
Trigger: TAAAGACACAGCAAGGGGCAAGCAGACTCTTGGCCA...ACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp TCTGTAGCCAAACCAATTTACCAGCCCGTCTTCCAGATGCAGGTGATCTTACTCGTACATAATGGGGGTTaGTTGACAGGTGGCTTTATA +
Preference number: 5 (lower is better)
Translates to: SVAKPIYQPVFQMQVILLVHNGG*LTGGFI
Trigger: TATAAAGCCACCTGTCAACAAACCCCCATTATGTAC...GAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CAAAGAGTTTGTCTCCTCCGACCCGCGCTCCTTGGACTTTTGGAAAGACAGGATCTTCCCTTACGAGGTTaGTTTTTGTTTTCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: QRVCLLRPALLGLLERQDLPLRG*FLFSFC
Trigger: ACAGAAAGAAAACAAAAACAAACCTCGTAAGGGAAG...ATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp ACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGAAGTGTTTATTTCCAAAGAGTTaGTCTCCTCCGACCCGCGCT +
Preference number: 5 (lower is better)
Translates to: TYRNTVFILQPQGQGGKCLFPKS*SPPTRA
Trigger: AGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAA...ACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CCATACACAGACTCTAGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAATTGGAAGTCACTTCATaGTCTCACCCAGGCCCGAGA +
Preference number: 5 (lower is better)
Translates to: PYTDSSKSQIHVHFTPSKLEVTS*SHPGPR
Trigger: TCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAA...TTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCTAGAGTCTGTGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CCCACACGTACAGAAACACAGTTTTTATATTACAACCTCAAGGACAGGGAGGGATCTAGCAACTGTCGGTaGGAAGTCACTTCATTGTCT +
Preference number: 5 (lower is better)
Translates to: PTRTETQFLYYNLKDREGSSNCR*EVTSLS
Trigger: AGACAATGAAGTGACTTCCAACCGACAGTTGCTAGA...TCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGTGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CCATACACAGACTCTAGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAATTATTTCCAAAGAGTTaGTCTCCTCCGACCCGCGCT +
Preference number: 5 (lower is better)
Translates to: PYTDSSKSQIHVHFTPSKLFPKS*SPPTRA
Trigger: AGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAA...TTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCTAGAGTCTGTGTATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTTATGTCTCTTAGTCGCCTaGGGTGTCCTACAAGTTTCC +
Preference number: 5 (lower is better)
Translates to: QSCGDMTAAQLRFLVKCLCLLVA*GVLQVS
Trigger: GGAAACTTGTAGGACACCCAAGGCGACTAAGAGACA...TAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS TCA 90 bp AAATCCTTCAAAGAACCTGAGTGTGCTGAACATTGTCACATTCACTaGCAGTGCCACAGTCAGTCCAAAGATCAGAATGAAGATGATGGA +
Preference number: 5 (lower is better)
Translates to: KSFKEPECAEHCHIH*QCHSQSKDQNEDDG
Trigger: TCCATCATCTTCATTCTGATCTTTGGACTGACTGTGGCACTGTCAGTGAATGTGACAATGTTCAGCACACTCAGGTTCTTTGAAGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380298.2
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000467177.5
ENST00000485307.5
ENST00000490273.5
ENST00000497691.5
CDS-3UTR CAA 90 bp CAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTTATATGGCACTTGCAGTTaGGGATTGCTCATTTGGCTC +
Preference number: 5 (lower is better)
Translates to: QSCGDMTAAQLRFLVKCLYGTCS*GLLIWL
Trigger: GAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATA...TAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CCATACACAGACTCTAGCAAAAGCCAAATTCATGTACATTTCACTCCGTCTAAATCTAGCAACTGTCGGTaGGAAGTCACTTCATTGTCT +
Preference number: 5 (lower is better)
Translates to: PYTDSSKSQIHVHFTPSKSSNCR*EVTSLS
Trigger: AGACAATGAAGTGACTTCCAACCGACAGTTGCTAGA...TTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCTAGAGTCTGTGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS-3UTR CAA 90 bp CAAAGCTGTGGCGATATGACTGCTGCTCAATTAAGATTTCTGGTGAAATGTTTAGTACATAATGGGGGTTaGTTGACAGGTGGCTTTATA +
Preference number: 5 (lower is better)
Translates to: QSCGDMTAAQLRFLVKCLVHNGG*LTGGFI
Trigger: TATAAAGCCACCTGTCAACAAACCCCCATTATGTAC...TAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS GCA 72 bp CCCGCGGCTCGAGAGAGAGCGCTCGGCGGCTCCGGGTaGGTCAGGCCGCCCCCATGTCACCCGCCGGACCCC +
Preference number: 6 (lower is better)
Translates to: PAARERALGGSG*VRPPPCHPPDP
Trigger: GGGGTCCGGCGGGTGACATGGGGGCGGCCTGACGCACCCGGAGCCGCCGAGCGCTCTCTCTCGAGCCGCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS GCA 72 bp GGGGTGGTGTGTCGCCTCCGTCCGCGCCGCTGCTGTTaGTCCGGTTGCCCGCAGCCTCCCAGGGGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: GVVCRLRPRRCC*SGCPQPPRGQW
Trigger: CCACTGCCCCCTGGGAGGCTGCGGGCAACCGGAGCAACAGCAGCGGCGCGGACGGAGGCGACACACCACCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380298.2
ENST00000406686.8
ENST00000436008.6
CDS GCA 72 bp ATGGCAGGGGTGGTGTGTCGCCTCCGTCCGCGCCGCTaGTGTTGCTCCGGTTGCCCGCAGCCTCCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: MAGVVCRLRPRR*CCSGCPQPPRG
Trigger: CCCCCTGGGAGGCTGCGGGCAACCGGAGCAACAGCAGCGGCGCGGACGGAGGCGACACACCACCCCTGCCAT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380298.2
ENST00000406686.8
ENST00000436008.6
CDS CCA 72 bp GGGCGGCGGTGCGGGCAAAGGCTGCTGCTCCCGGGGTaGCCGCGCTGTATTTCTCCGACTTCGGGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: GRRCGQRLLLPG*PRCISPTSGAS
Trigger: GGAGGCGCCCGAAGTCGGAGAAATACAGCGCGGCCACCCCGGGAGCAGCAGCCTTTGCCCGCACCGCCGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS CAA 72 bp AGGGGTGGTGTGTCGCCTCCGTCCGCGCCGCTGCTGTaGCTCCGGTTGCCCGCAGCCTCCCAGGGGGCAGTG +
Preference number: 6 (lower is better)
Translates to: RGGVSPPSAPLL*LRLPAASQGAV
Trigger: CACTGCCCCCTGGGAGGCTGCGGGCAACCGGAGCAACAGCAGCGGCGCGGACGGAGGCGACACACCACCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380298.2
ENST00000406686.8
ENST00000436008.6
CDS GCA 72 bp CAGGGCCCTGCGGGCGGCGGTGCGGGCAAAGGCTGCTaGTCCCGGGGTGGCCGCGCTGTATTTCTCCGACTT +
Preference number: 6 (lower is better)
Translates to: QGPAGGGAGKGC*SRGGRAVFLRL
Trigger: AAGTCGGAGAAATACAGCGCGGCCACCCCGGGAGCAGCAGCCTTTGCCCGCACCGCCGCCCGCAGGGCCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406686.8
ENST00000436008.6
CDS TCA 72 bp CCTGCCAATCCCGGCACAGGGCGGCTAGCCCAGGCATaGGGAACTGGCCCGCCATGGCCACGAAGCTCGCCA +
Preference number: 6 (lower is better)
Translates to: PANPGTGRLAQA*GTGPPWPRSSP
Trigger: TGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCTGGGCTAGCCGCCCTGTGCCGGGATTGGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000380298.2
ENST00000380302.8
ENST00000406686.8
ENST00000433689.2
ENST00000436008.6
ENST00000467144.5
ENST00000467177.5
ENST00000485307.5
ENST00000490273.5
ENST00000496753.1
ENST00000497691.5
CDS CAA 90 bp ACCCCTGCCAGCTCGGTGCCTTTGCCGGCCCCGCGGCACCAGAAGTaGGGCTGGTCCAGGAGGAACGAGTCCGAGAACTGGCTGAAGCCG +
Preference number: 6 (lower is better)
Translates to: TPASSVPLPAPRHQK*GWSRRNESENWLKP
Trigger: CGGCTTCAGCCAGTTCTCGGACTCGTTCCTCCTGGACCAGCCCAACTTCTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGGCAGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380298.2
ENST00000406686.8
ENST00000436008.6
CDS CCA 72 bp GCTCGGTGCCTTTGCCGGCCCCGCGGCACCAGAAGTTaGGCTGGTCCAGGAGGAACGAGTCCGAGAACTGGC +
Preference number: 6 (lower is better)
Translates to: ARCLCRPRGTRS*AGPGGTSPRTG
Trigger: GCCAGTTCTCGGACTCGTTCCTCCTGGACCAGCCCAACTTCTGGTGCCGCGGGGCCGGCAAAGGCACCGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380298.2
ENST00000406686.8
ENST00000436008.6
CDS GCA 72 bp GTTCTGGACGAGGCCGGCGCGGATGCCGTAGTCCCATaGGCGGCAGTCACAGTTGGAGGCGTTGTCCCCCTT +
Preference number: 6 (lower is better)
Translates to: VLDEAGADAVVP*AAVTVGGVVPL
Trigger: AAGGGGGACAACGCCTCCAACTGTGACTGCCGCGCATGGGACTACGGCATCCGCGCCGGCCTCGTCCAGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380298.2
ENST00000406686.8
ENST00000436008.6
ENST00000485307.5
CDS GCA 72 bp AGCAGGAAGGGGCAGATGATGAGGGCCTGCAGCACCTaGCAATCCCGGCACAGGGCGGCTAGCCCAGGCATG +
Preference number: 6 (lower is better)
Translates to: SRKGQMMRACST*QSRHRAASPGM
Trigger: CATGCCTGGGCTAGCCGCCCTGTGCCGGGATTGGCAGGTGCTGCAGGCCCTCATCATCTGCCCCTTCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000380298.2
ENST00000380302.8
ENST00000406686.8
ENST00000433689.2
ENST00000436008.6
ENST00000467177.5
ENST00000485307.5
ENST00000490273.5
ENST00000496753.1
ENST00000497691.5
CDS CCA 72 bp CGCGGATGCCGTAGTCCCATGCGCGGCAGTCACAGTTaGAGGCGTTGTCCCCCTTGTCCGGAGGGGATGGCA +
Preference number: 6 (lower is better)
Translates to: RGCRSPMRGSHS*RRCPPCPEGMA
Trigger: TGCCATCCCCTCCGGACAAGGGGGACAACGCCTCCAACTGTGACTGCCGCGCATGGGACTACGGCATCCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380298.2
ENST00000406686.8
ENST00000436008.6
ENST00000485307.5
CDS CAA 72 bp AGCTCGGTGCCTTTGCCGGCCCCGCGGCACCAGAAGTaGGGCTGGTCCAGGAGGAACGAGTCCGAGAACTGG +
Preference number: 6 (lower is better)
Translates to: SSVPLPAPRHQK*GWSRRNESENW
Trigger: CCAGTTCTCGGACTCGTTCCTCCTGGACCAGCCCAACTTCTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380298.2
ENST00000406686.8
ENST00000436008.6
CDS CCA 72 bp GTGCCTTTGCCGGCCCCGCGGCACCAGAAGTTGGGCTaGTCCAGGAGGAACGAGTCCGAGAACTGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: VPLPAPRHQKLG*SRRNESENWLK
Trigger: CTTCAGCCAGTTCTCGGACTCGTTCCTCCTGGACCAGCCCAACTTCTGGTGCCGCGGGGCCGGCAAAGGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380298.2
ENST00000406686.8
ENST00000436008.6
CDS CCA 72 bp AGGAGTTCTGGAGCCCATGAGCCTGGGCTAGAATCCTaGCCCCCGCCCACCAGCTTCACTTCCCGAAGCCTC +
Preference number: 6 (lower is better)
Translates to: RSSGAHEPGLES*PPPTSFTSRSL
Trigger: GAGGCTTCGGGAAGTGAAGCTGGTGGGCGGGGGCCAGGATTCTAGCCCAGGCTCATGGGCTCCAGAACTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482874.1
CDS CAA 90 bp AGGACCCCAGGGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTaGGGTCCAACAGCCACCTCAGCTATGAACCACGAAGCTGATGTG +
Preference number: 6 (lower is better)
Translates to: RTPGPGSHCLLGASG*GPTATSAMNHEADV
Trigger: CACATCAGCTTCGTGGTTCATAGCTGAGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCCCTGGGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS CAA 72 bp GGGCCAGGTTCTCACTGCCTCTTGGGCGCCTCGGGGTaGGGTCCAACAGCCACCTCAGCTATGAACCACGAA +
Preference number: 6 (lower is better)
Translates to: GPGSHCLLGASG*GPTATSAMNHE
Trigger: TTCGTGGTTCATAGCTGAGGTGGCTGTTGGACCCAACCCCGAGGCGCCCAAGAGGCAGTGAGAACCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS TCA 72 bp GCTCCTTGCCCACGCCTCTGCTCCCTGGATCTTCACTaGGAGCCTGCGGCAGGAAAGCTCTGTTCCTCTGCT +
Preference number: 6 (lower is better)
Translates to: APCPRLCSLDLH*EPAAGKLCSSA
Trigger: AGCAGAGGAACAGAGCTTTCCTGCCGCAGGCTCTCAGTGAAGATCCAGGGAGCAGAGGCGTGGGCAAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490273.5
CDS CCA 72 bp AAGTTGGGCTGGTCCAGGAGGAACGAGTCCGAGAACTaGCTGAAGCCGATGAACAGCGCCGGGATCCAGGTG +
Preference number: 6 (lower is better)
Translates to: KLGWSRRNESEN*LKPMNSAGIQV
Trigger: CACCTGGATCCCGGCGCTGTTCATCGGCTTCAGCCAGTTCTCGGACTCGTTCCTCCTGGACCAGCCCAACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380298.2
ENST00000406686.8
ENST00000436008.6
CDS CCA 72 bp CACAAGATCCCACTGGCTCCGAACATCATCGGTTTCTaGGTGAAGGCGGCAGACACCTGGCAGCGCCCAAGG +
Preference number: 6 (lower is better)
Translates to: HKIPLAPNIIGF*VKAADTWQRPR
Trigger: CCTTGGGCGCTGCCAGGTGTCTGCCGCCTTCACCCAGAAACCGATGATGTTCGGAGCCAGTGGGATCTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380302.8
ENST00000497691.5
CDS CCA 72 bp GGACTCGTCTTTGATTTCCGAGAAGCCGGCGTCCCCTaGGGTGTCTCCCATGACGCACCTTATCACCGTCGG +
Preference number: 6 (lower is better)
Translates to: GLVFDFREAGVP*GVSHDAPYHRR
Trigger: CCGACGGTGATAAGGTGCGTCATGGGAGACACCCCAGGGGACGCCGGCTTCTCGGAAATCAAAGACGAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS GCA 72 bp AGGAAGCATGTGCAGTCGCACCAGCCCAGGGCGCTGTaGAGAGTGTACTCACGACCAGTAGAGCAGCATGAG +
Preference number: 6 (lower is better)
Translates to: RKHVQSHQPRAL*RVYSRPVEQHE
Trigger: CTCATGCTGCTCTACTGGTCGTGAGTACACTCTGCACAGCGCCCTGGGCTGGTGCGACTGCACATGCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380298.2
ENST00000433689.2
CDS CCA 72 bp GAACAGACTTTTGCTGCCACAAAGGTGCGAGTGCCGTaGCTGGGAGCAGGAGTTCTGGAGCCCATGAGCCTG +
Preference number: 6 (lower is better)
Translates to: EQTFAATKVRVP*LGAGVLEPMSL
Trigger: CAGGCTCATGGGCTCCAGAACTCCTGCTCCCAGCCACGGCACTCGCACCTTTGTGGCAGCAAAAGTCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482874.1
CDS CAA 72 bp TTAATCCCACACCAGCCTGGAGCCAGGGACTCGTCTTaGATTTCCGAGAAGCCGGCGTCCCCTGGGGTGTCT +
Preference number: 6 (lower is better)
Translates to: LIPHQPGARDSS*ISEKPASPGVS
Trigger: AGACACCCCAGGGGACGCCGGCTTCTCGGAAATCAAAGACGAGTCCCTGGCTCCAGGCTGGTGTGGGATTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS TCA 72 bp AGATCCCACTGGCTCCGAACATCATCGGTTTCTGGGTaGAGGCGGCAGACACCTGGCAGCGCCCAAGGAATA +
Preference number: 6 (lower is better)
Translates to: RSHWLRTSSVSG*RRQTPGSAQGI
Trigger: TATTCCTTGGGCGCTGCCAGGTGTCTGCCGCCTTCACCCAGAAACCGATGATGTTCGGAGCCAGTGGGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380302.8
ENST00000497691.5
CDS TCA 72 bp GAAGAAGCCTGGCTCCGAACATCATCGGTTTCTGGGTaGAGGCGGCAGACACCTGGCAGCGCCCAAGGAATA +
Preference number: 6 (lower is better)
Translates to: EEAWLRTSSVSG*RRQTPGSAQGI
Trigger: TATTCCTTGGGCGCTGCCAGGTGTCTGCCGCCTTCACCCAGAAACCGATGATGTTCGGAGCCAGGCTTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490273.5
CDS GCA 72 bp AGCCAGCCCAAAGTGAGCTACAGAACAGACTTTTGCTaGCACAAAGGTGCGAGTGCCGTGGCTGGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: SQPKVSYRTDFC*HKGASAVAGSR
Trigger: CCTGCTCCCAGCCACGGCACTCGCACCTTTGTGGCAGCAAAAGTCTGTTCTGTAGCTCACTTTGGGCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482874.1
CDS CCA 72 bp GGAGGATCAGCCTCTTTGCAGACTCAAACTGCTGGGTaGCCATTAGCCACCGGAGGGACTCGGGGAATATCG +
Preference number: 6 (lower is better)
Translates to: GGSASLQTQTAG*PLATGGTRGIS
Trigger: CGATATTCCCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000467177.5
ENST00000485307.5
ENST00000490273.5
ENST00000496753.1
CDS TCA 72 bp GAGCCTGCGGCAGGAAAGCTCTGTTCCTCTGCTGAGTaGACGCTGGCTCCTTCCACAATCACTCAGGCTTTG +
Preference number: 6 (lower is better)
Translates to: EPAAGKLCSSAE*TLAPSTITQAL
Trigger: CAAAGCCTGAGTGATTGTGGAAGGAGCCAGCGTTCACTCAGCAGAGGAACAGAGCTTTCCTGCCGCAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490273.5
CDS CCA 72 bp GAGACAGAGCTGACGCTGGTTAATCCCACACCAGCCTaGAGCCAGGGACTCGTCTTTGATTTCCGAGAAGCC +
Preference number: 6 (lower is better)
Translates to: ETELTLVNPTPA*SQGLVFDFREA
Trigger: GGCTTCTCGGAAATCAAAGACGAGTCCCTGGCTCCAGGCTGGTGTGGGATTAACCAGCGTCAGCTCTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485307.5
CDS CAA 90 bp GCATGGGAGGCAAACATGCCCACGATGGAAAACGCGATGGAAAATTaGTCCTTGACGCTGTCACTCATCCCTACGGCCAACTTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: AWEANMPTMENAMEN*SLTLSLIPTANFSC
Trigger: GCAGCTGAAGTTGGCCGTAGGGATGAGTGACAGCGTCAAGGACAAATTTTCCATCGCGTTTTCCATCGTGGGCATGTTTGCCTCCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436008.6
CDS TCA 72 bp AACAGGGCACTTGAGGTATCAGCAGTTCTGCCAGCCTaGGGATGTTGCTGTTTCACAGCTCCTGGGAGCAAT +
Preference number: 6 (lower is better)
Translates to: NRALEVSAVLPA*GCCCFTAPGSN
Trigger: ATTGCTCCCAGGAGCTGTGAAACAGCAACATCCTCAGGCTGGCAGAACTGCTGATACCTCAAGTGCCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496753.1
CDS TCA 72 bp TGCCCACGATGGAAAACGCGATGGAAAATTTGTCCTTaGCGCTGTCACTCATCCCTACGGCCAACTTCAGCT +
Preference number: 6 (lower is better)
Translates to: CPRWKTRWKICP*RCHSSLRPTSA
Trigger: AGCTGAAGTTGGCCGTAGGGATGAGTGACAGCGTCAAGGACAAATTTTCCATCGCGTTTTCCATCGTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436008.6
CDS TCA 72 bp TTTAAACGATGGATGCTGGGGTCCTACAGGCATTTCTaGAAGTTCCCCAGGGTGACTCTAAGTGCACCGGAG +
Preference number: 6 (lower is better)
Translates to: FKRWMLGSYRHF*KFPRVTLSAPE
Trigger: CTCCGGTGCACTTAGAGTCACCCTGGGGAACTTTCAGAAATGCCTGTAGGACCCCAGCATCCATCGTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467177.5
CDS CAA 72 bp ATGCCCACGATGGAAAACGCGATGGAAAATTTGTCCTaGACGCTGTCACTCATCCCTACGGCCAACTTCAGC +
Preference number: 6 (lower is better)
Translates to: MPTMENAMENLS*TLSLIPTANFS
Trigger: GCTGAAGTTGGCCGTAGGGATGAGTGACAGCGTCAAGGACAAATTTTCCATCGCGTTTTCCATCGTGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436008.6
CDS CAA 72 bp GCAAACATGCCCACGATGGAAAACGCGATGGAAAATTaGTCCTTGACGCTGTCACTCATCCCTACGGCCAAC +
Preference number: 6 (lower is better)
Translates to: ANMPTMENAMEN*SLTLSLIPTAN
Trigger: GTTGGCCGTAGGGATGAGTGACAGCGTCAAGGACAAATTTTCCATCGCGTTTTCCATCGTGGGCATGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436008.6
CDS TCA 72 bp TCAAGACTGGGGCATCAGCCATTAGCCTCCAAGCCTTaGGTAAACCCACATAAAAAGAGCCAGCCCAAAGTG +
Preference number: 6 (lower is better)
Translates to: SRLGHQPLASKP*VNPHKKSQPKV
Trigger: CACTTTGGGCTGGCTCTTTTTATGTGGGTTTACTCAAGGCTTGGAGGCTAATGGCTGATGCCCCAGTCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482874.1
CDS GCA 72 bp CACAGCTCTATTCCAACGACTGAAATTGTTTTCATCTaGTGCCCACCACAAGTGCCCTATGTGGTGTGCCAG +
Preference number: 6 (lower is better)
Translates to: HSSIPTTEIVFI*CPPQVPYVVCQ
Trigger: CTGGCACACCACATAGGGCACTTGTGGTGGGCAGCAGATGAAAACAATTTCAGTCGTTGGAATAGAGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433689.2
ENST00000467144.5
CDS GCA 72 bp AAAAGAACAACAGGGCACTTGAGGTATCAGCAGTTCTaGCAGCCTGAGGATGTTGCTGTTTCACAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: KRTTGHLRYQQF*QPEDVAVSQLL
Trigger: CAGGAGCTGTGAAACAGCAACATCCTCAGGCTGGCAGAACTGCTGATACCTCAAGTGCCCTGTTGTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496753.1
CDS CCA 72 bp GGACCTTCCAGGCATTATCACACACAAGATCCCACTTaGAAATTAGGTTCCAGGGGGCTGAGTAATCCCCAA +
Preference number: 6 (lower is better)
Translates to: GPSRHYHTQDPT*KLGSRGLSNPQ
Trigger: TTGGGGATTACTCAGCCCCCTGGAACCTAATTTCCAAGTGGGATCTTGTGTGTGATAATGCCTGGAAGGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490273.5
CDS GCA 72 bp AGCTCTATTCCAACGACTGAAATTGTTTTCATCTGCTaGCCACCACAAGTGCCCTATGTGGTGTGCCAGTGT +
Preference number: 6 (lower is better)
Translates to: SSIPTTEIVFIC*PPQVPYVVCQC
Trigger: ACACTGGCACACCACATAGGGCACTTGTGGTGGGCAGCAGATGAAAACAATTTCAGTCGTTGGAATAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433689.2
ENST00000467144.5
CDS CCA 72 bp AAAGTGTCCAGAGAACTTCTTTTAAACGATGGATGCTaGGGTCCTACAGGCATTTCTGAAAGTTCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: KVSRELLLNDGC*GPTGISESSPG
Trigger: CCCTGGGGAACTTTCAGAAATGCCTGTAGGACCCCAGCATCCATCGTTTAAAAGAAGTTCTCTGGACACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467177.5
CDS CCA 72 bp GCCGTCTGTGCATTTCTCGAGGAAGGAGATGCCTTCTaGTACAGGGTCTTCGTTAATGTTTATTCCATTAGA +
Preference number: 6 (lower is better)
Translates to: AVCAFLEEGDAF*YRVFVNVYSIR
Trigger: TCTAATGGAATAAACATTAACGAAGACCCTGTACCAGAAGGCATCTCCTTCCTCGAGAAATGCACAGACGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482874.1
CDS CCA 72 bp AAGATTAATCCAACCAGTAAGGAGAACTTAGCGATATaGACCTTCCAGGCATTATCACACACAAGATCCCAC +
Preference number: 6 (lower is better)
Translates to: KINPTSKENLAI*TFQALSHTRSH
Trigger: GTGGGATCTTGTGTGTGATAATGCCTGGAAGGTCCATATCGCTAAGTTCTCCTTACTGGTTGGATTAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380298.2
ENST00000380302.8
ENST00000406686.8
ENST00000436008.6
ENST00000485307.5
ENST00000490273.5
ENST00000497691.5
CDS CCA 72 bp AAGATTAATCCAACCAGTAAGGAGAACTTAGCGATATaGACCTTCCAGGCATTATCACACACAAGATCCCAG +
Preference number: 6 (lower is better)
Translates to: KINPTSKENLAI*TFQALSHTRSQ
Trigger: CTGGGATCTTGTGTGTGATAATGCCTGGAAGGTCCATATCGCTAAGTTCTCCTTACTGGTTGGATTAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467177.5