RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC22A17 (Homo sapiens)

Ensembl gene IDs: ENSG00000092096

Ensembl transcript IDs: ENST00000206544.8, ENST00000354772.9, ENST00000397260.7, ENST00000397267.5, ENST00000473917.1, ENST00000474057.6, ENST00000474774.1, ENST00000556803.1, ENST00000557699.5, ENST00000636431.2

Found 482 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGAGGGCGCAGGCCGCCAGCACCACGTGCTGCAGGAAGGCTCCATaGCCCATGTGGAGGCGCTGGGCCGGGCCGCTCAGTCCTCCAAGC +
Preference number: 1 (lower is better)
Translates to: RRAQAASTTCCRKAP*PMWRRWAGPLSPPS
Trigger: GCTTGGAGGACTGAGCGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGCCTGCGCCCTCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR CCA 90 bp CAGGCCGCCAGCACCACGTGCTGCAGGAAGGCTCCATGGCCCATGTaGAGGCGCTGGGCCGGGCCGCTCAGTCCTCCAAGCGCCCCTAGA +
Preference number: 1 (lower is better)
Translates to: QAASTTCCRKAPWPM*RRWAGPLSPPSAPR
Trigger: TCTAGGGGCGCTTGGAGGACTGAGCGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR GCA 90 bp ATGCTGAGAATGCAGAGGAGGGCGCAGGCCGCCAGCACCACGTGCTaGAGGAAGGCTCCATGGCCCATGTGGAGGCGCTGGGCCGGGCCG +
Preference number: 1 (lower is better)
Translates to: MLRMQRRAQAASTTC*RKAPWPMWRRWAGP
Trigger: CGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGCCTGCGCCCTCCTCTGCATTCTCAGCAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR TCA 90 bp AGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTaGGGTGCCTCTGAGACTTCTGGGCAGCCCTGCCTTCCCTACTCA +
Preference number: 1 (lower is better)
Translates to: RQGGDGPLSSPRWLA*GASETSGQPCLPYS
Trigger: TGAGTAGGGAAGGCAGGGCTGCCCAGAAGTCTCAGAGGCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
3UTR GCA 90 bp ATAATGCTGAGAATGCAGAGGAGGGCGCAGGCCGCCAGCACCACGTaGTGCAGGAAGGCTCCATGGCCCATGTGGAGGCGCTGGGCCGGG +
Preference number: 1 (lower is better)
Translates to: IMLRMQRRAQAASTT*CRKAPWPMWRRWAG
Trigger: CCCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGCCTGCGCCCTCCTCTGCATTCTCAGCATTAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR GCA 90 bp GCCAAATCGGTCCACGGTGACCCCCAGGAAGACACAGGCCAGGGCTaGGGTGCCGCTGGCCAGCAGAGAGCACAGGTAGAAGTCCGATGG +
Preference number: 1 (lower is better)
Translates to: AKSVHGDPQEDTGQG*GAAGQQRAQVEVRW
Trigger: CCATCGGACTTCTACCTGTGCTCTCTGCTGGCCAGCGGCACCGCAGCCCTGGCCTGTGTCTTCCTGGGGGTCACCGTGGACCGATTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR TCA 90 bp TGCCCATGGGGCCGGTTTCGCTCAGCCAGGATCCTCAGCACAGACTaGGCCTCCTCAATCTGCCGCTTCACTATCAGCCACCGTGCGGAC +
Preference number: 1 (lower is better)
Translates to: CPWGRFRSARILSTD*ASSICRFTISHRAD
Trigger: GTCCGCACGGTGGCTGATAGTGAAGCGGCAGATTGAGGAGGCTCAGTCTGTGCTGAGGATCCTGGCTGAGCGAAACCGGCCCCATGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR CCA 90 bp GGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCAGTaGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAA +
Preference number: 1 (lower is better)
Translates to: GLGGCLWAQDGAQTQ*LQCGALSLSPDSGQ
Trigger: TTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCACTGGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
3UTR TCA 90 bp CTGCGGGGTAACCCAGGAACAGGTAGCCGGAGGCAAAGCCCAAGATaGAGAGGATCTGCTCCAGGATCACCTGCCAGCCCAGGTCACACA +
Preference number: 1 (lower is better)
Translates to: LRGNPGTGSRRQSPR*RGSAPGSPASPGHT
Trigger: TGTGTGACCTGGGCTGGCAGGTGATCCTGGAGCAGATCCTCTTCATCTTGGGCTTTGCCTCCGGCTACCTGTTCCTGGGTTACCCCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636431.2
3UTR-3UTR TCA 90 bp AGCGGGACGTGGTCACAGCGGGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCCGGGTGGGGACGGCCCTCTaGGCTCTCCGCGATGGCTGG +
Preference number: 2 (lower is better)
Translates to: SGTWSQRVGGGCRSREGRVGTAL*ALRDGW
Trigger: CCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCAC...CCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTGTGACCACGTCCCGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR TCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCGTGGGGACGGCCCTCTaGGCTCTCCGCGATGGCTGG +
Preference number: 2 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCVGTAL*ALRDGW
Trigger: CCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCAC...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
3UTR-3UTR GCA 90 bp CGGGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCGTCCCCTCGGGCAGGAGCTTaGGCTTGGTCTCCGGCAGCA +
Preference number: 2 (lower is better)
Translates to: RVGGGCRSREGRRHSSPSPRAGA*AWSPAA
Trigger: TGCTGCCGGAGACCAAGCGCAAGCTCCTGCCCGAGG...GGACGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR GCA 90 bp GGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCGTCCCGCCTCGGGCAGGAGCTTaGGCTTGGTCTCCGGCAGCA +
Preference number: 2 (lower is better)
Translates to: GRGWLPQQGRPATQLPVPPRAGA*AWSPAA
Trigger: TGCTGCCGGAGACCAAGCGCAAGCTCCTGCCCGAGG...CGGGACGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR TCA 90 bp GGGGTGGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCGTCCCGGAGCACCGCGATGGCTGGCGTaGGGTGCCTCTGAGACTTCT +
Preference number: 2 (lower is better)
Translates to: GVAAAAGKAGDTAPRPGAPRWLA*GASETS
Trigger: AGAAGTCTCAGAGGCACCTCACGCCAGCCATCGCGG...TGCTCCGGGACGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR TCA 90 bp AGCGGGACGTGGTCACAGCGGGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCCGGCAGCAAGGAGGGTGCTaGGGATGGCGGCAGCTTGGG +
Preference number: 2 (lower is better)
Translates to: SGTWSQRVGGGCRSREGRQQGGC*GWRQLG
Trigger: CCCAAGCTGCCGCCATCCTCAGCACCCTCCTTGCTG...CCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTGTGACCACGTCCCGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR CCA 90 bp GGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCGTCCCGGCTCTCCGCGATGGCTaGCGTGAGGTGCCTCTGAGA +
Preference number: 2 (lower is better)
Translates to: GRGWLPQQGRPATQLPVPALRDG*REVPLR
Trigger: TCTCAGAGGCACCTCACGCCAGCCATCGCGGAGAGC...CGGGACGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR GCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCTCCTCCCCCAGCATCTaGCCATGGGGCCGGTTTCGC +
Preference number: 2 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCSSPSI*PWGRFR
Trigger: GCGAAACCGGCCCCATGGGCAGATGCTGGGGGAGGA...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR CCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCGCTCTCCGCGATGGCTaGCGTGAGGTGCCTCTGAGA +
Preference number: 2 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCALRDG*REVPLR
Trigger: TCTCAGAGGCACCTCACGCCAGCCATCGCGGAGAGC...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
3UTR-3UTR CCA 90 bp CAGCGGGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCGGGAGCCCAGACCCAGTaGTTACAGTGTGGAGCTCTC +
Preference number: 2 (lower is better)
Translates to: QRVGGGCRSREGRRHSSPGAQTQ*LQCGAL
Trigger: GAGAGCTCCACACTGTAACCACTGGGTCTGGGCTCC...CGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR GCA 90 bp TCTGTGTGGGCCAGCCTCCCGCCAGGGTACTCAGAGGCCGCTCAGAGGGCAGGGCCCAGGAACAGGAAGTaGCCTCCCACCCCCACCAAC +
Preference number: 2 (lower is better)
Translates to: SVWASLPPGYSEAAQRAGPRNRK*PPTPTN
Trigger: GTTGGTGGGGGTGGGAGGGCACTTCCTGTTCCTGGG...CCCTGCCCTCTGAGCGGCCTCTGAGTACCCTGGCGGGAGGCTGGCCCACACAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397260.7
3UTR-3UTR GCA 90 bp CAGCGGGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCGCACTATCAGCCACCGTaGGGACTCCAGGAACAAACC +
Preference number: 2 (lower is better)
Translates to: QRVGGGCRSREGRRHSSPHYQPP*GLQEQT
Trigger: GGTTTGTTCCTGGAGTCCGCACGGTGGCTGATAGTG...CGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR CCA 90 bp GAAGGCTCCATGGCCCATGTGGAGGCGCTGGGCCGGGCCGCTCAGTCCTCCAAGGCTCTCCGCGATGGCTaGCGTGAGGTGCCTCTGAGA +
Preference number: 2 (lower is better)
Translates to: EGSMAHVEALGRAAQSSKALRDG*REVPLR
Trigger: TCTCAGAGGCACCTCACGCCAGCCATCGCGGAGAGC...CTTGGAGGACTGAGCGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR TCA 90 bp GCCGGTAAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGTGGGGACGGCCCTCTaGGCTCTCCGCGATGGCTGG +
Preference number: 2 (lower is better)
Translates to: AGKGHGEKKDAPAAKSVHVGTAL*ALRDGW
Trigger: CCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCAC...GTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTTACCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR TCA 90 bp GGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCGTCCCGGGACAGAGAAAGTGGTaGTGGCAGCCTCGTTCAGAT +
Preference number: 2 (lower is better)
Translates to: GRGWLPQQGRPATQLPVPGQRKW*WQPRSD
Trigger: ATCTGAACGAGGCTGCCATCACCACTTTCTCTGTCC...CGGGACGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR CCA 90 bp CAGGCCGCCAGCACCACGTGCTGCAGGAAGGCTCCATGGCCCATGTGGAGGCGCAGGATGGCGGCAGCTTaGGAGGAGAAGAGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: QAASTTCCRKAPWPMWRRRMAAA*EEKSPR
Trigger: CCTTGGGCTCTTCTCCTCCCAAGCTGCCGCCATCCT...GCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR CAA 90 bp CGACACAGCTCCCCGTCCCGGAGCACCTCGGGCAGGAGCTTGCGCTaGGTCTCCGGCAGCAGCATAATGCTGAGAATGCAGAGGAGGGCG +
Preference number: 2 (lower is better)
Translates to: RHSSPSRSTSGRSLR*VSGSSIMLRMQRRA
Trigger: CGCCCTCCTCTGCATTCTCAGCATTATGCTGCTGCCGGAGACCAAGCGCAAGCTCCTGCCCGAGGTGCTCCGGGACGGGGAGCTGTGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR TCA 90 bp AGGAGGGCGCAGGCCGCCAGCACCACGTGCTGCAGGAAGGCTCCATGGCCCATGATCCTCAGCACAGACTaGGCCTCCTCAATCTGCCGC +
Preference number: 2 (lower is better)
Translates to: RRAQAASTTCCRKAPWPMILSTD*ASSICR
Trigger: GCGGCAGATTGAGGAGGCTCAGTCTGTGCTGAGGAT...CATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGCCTGCGCCCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR TCA 90 bp TTTCTGTGTGGGCCAGCCTCCCGCCAGGGTACTCAGAGGCCGCTCAGAGGGCAGGGACAGTGGTGGGGATaGCCTCAGCAGCAAGGAGGG +
Preference number: 2 (lower is better)
Translates to: FLCGPASRQGTQRPLRGQGQWWG*PQQQGG
Trigger: CCCTCCTTGCTGCTGAGGTCATCCCCACCACTGTCC...CTGCCCTCTGAGCGGCCTCTGAGTACCCTGGCGGGAGGCTGGCCCACACAGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR TCA 90 bp CAGGCCGCCAGCACCACGTGCTGCAGGAAGGCTCCATGGCCCATGTGGAGGCGCCTCTGGCCAAGGAAGTaGATGCAAAGCAGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: QAASTTCCRKAPWPMWRRLWPRK*MQSSRE
Trigger: CTCCCTGCTGCTTTGCATTCACTTCCTTGGCCAGAG...GCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR GCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTCTTCCCGATCTTCTTaGCACCTTTCTGTGTGGGCC +
Preference number: 2 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRSSRSS*HLSVWA
Trigger: GGCCCACACAGAAAGGTGGCAAGAAGATCGGGAAGA...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
3UTR-3UTR GCA 90 bp AAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTGACCCCCACCAACTCCCCTaGCAGGGCCACCCGAAGCCT +
Preference number: 2 (lower is better)
Translates to: KGHGEKKDAPAAKSVHGDPHQLP*QGHPKP
Trigger: AGGCTTCGGGTGGCCCTGGCAGGGGAGTTGGTGGGG...GTCACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397260.7
3UTR-3UTR CCA 90 bp GGTAGAAGTCCGATGGGCTCCCTCCTCCTCCCACAGGCTGGTAGCAGTGGCGAAGCCACCCGAAGCCTCTaGGTTGGGTCGCACAGCTCC +
Preference number: 2 (lower is better)
Translates to: GRSPMGSLLLPQAGSSGEATRSL*VGSHSS
Trigger: GGAGCTGTGCGACCCAACCCAGAGGCTTCGGGTGGC...TTCGCCACTGCTACCAGCCTGTGGGAGGAGGAGGGAGCCCATCGGACTTCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397260.7
3UTR-3UTR TCA 90 bp AGCACAGGTAGAAGTCCGATGGGCTCCCTCCTCCTCCCACAGGCTGGTAGCAGTGGCGTGAGGTGCCTCTaGGACTTCTGGGCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: STGRSPMGSLLLPQAGSSGVRCL*DFWAAL
Trigger: CAGGGCTGCCCAGAAGTCTCAGAGGCACCTCACGCC...ACTGCTACCAGCCTGTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR TCA 90 bp GGTAAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTGGCGTGAGGTGCCTCTaGGACTTCTGGGCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: GKGHGEKKDAPAAKSVHGGVRCL*DFWAAL
Trigger: CAGGGCTGCCCAGAAGTCTCAGAGGCACCTCACGCC...ACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR GCA 90 bp CAGAGAGCACAGGTAGAAGTCCGATGGGCTCCCTCCTCCTCCCACAGGCTGGTATCCTCCCCCAGCATCTaGCCATGGGGCCGGTTTCGC +
Preference number: 2 (lower is better)
Translates to: QRAQVEVRWAPSSSHRLVSSPSI*PWGRFR
Trigger: GCGAAACCGGCCCCATGGGCAGATGCTGGGGGAGGA...TACCAGCCTGTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTGTGCTCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR CCA 90 bp GGTAAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTCCGAAGCCTCTGGGTTaGGTCGCACAGCTCCAGGCG +
Preference number: 2 (lower is better)
Translates to: GKGHGEKKDAPAAKSVHGPKPLG*VAQLQA
Trigger: CGCCTGGAGCTGTGCGACCCAACCCAGAGGCTTCGG...ACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397260.7
3UTR-3UTR TCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAGTGGGGACGGCCCTCTaGGCTCTCCGCGATGGCTGG +
Preference number: 2 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEVGTAL*ALRDGW
Trigger: CCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCAC...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
3UTR-3UTR CCA 90 bp AATCTGCCGCTTCACTATCAGCCACCGTGCGGACTCCAGGAACAAACCAGGCCAAGGGAGGAGGCAGGGTaGGGACGGCCCTCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: NLPLHYQPPCGLQEQTRPREEAG*GRPSEL
Trigger: GAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTCCCT...TGGCCTGGTTTGTTCCTGGAGTCCGCACGGTGGCTGATAGTGAAGCGGCAGATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR CCA 90 bp AGGGTTGGGGGTGGCAAGCAGCGGGACGTGGTCACAGCGGGTAGGGGGTGGCTGATAATGAGGTCTGGGTaGATGTCTTTGGGCGCAGGA +
Preference number: 2 (lower is better)
Translates to: RVGGGKQRDVVTAGRGWLIMRSG*MSLGAG
Trigger: TCCTGCGCCCAAAGACATCCACCCAGACCTCATTAT...CAGCCACCCCCTACCCGCTGTGACCACGTCCCGCTGCTTGCCACCCCCAACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR CCA 90 bp CGTGCTGCAGGAAGGCTCCATGGCCCATGTGGAGGCGCTGGGCCGGGCCGCTCAAGAAATAATGAGGTCTaGGTGGATGTCTTTGGGCGC +
Preference number: 2 (lower is better)
Translates to: RAAGRLHGPCGGAGPGRSRNNEV*VDVFGR
Trigger: GCGCCCAAAGACATCCACCCAGACCTCATTATTTCT...TGAGCGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR CCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCAGGGAGGAGGCAGGGTaGGGACGGCCCTCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPREEAG*GRPSEL
Trigger: GAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTCCCT...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
3UTR-3UTR TCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCGGCGTGAGGTGCCTCTaGGACTTCTGGGCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPGVRCL*DFWAAL
Trigger: CAGGGCTGCCCAGAAGTCTCAGAGGCACCTCACGCC...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
3UTR-3UTR TCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGCCGCGATGGCTGGCGTaGGGTGCCTCTGAGACTTCT +
Preference number: 2 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQPRWLA*GASETS
Trigger: AGAAGTCTCAGAGGCACCTCACGCCAGCCATCGCGG...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
3UTR-3UTR CCA 90 bp TCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGGTCATGGAGAGACAGTGGCGAATGGCATaGGCAATGAAGCCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: SHRPSRTREAMPVRVMERQWRMA*AMKPAG
Trigger: CCCTGCAGGCTTCATTGCCCATGCCATTCGCCACTG...TCTCTCCATGACCCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474057.6
3UTR-3UTR TCA 90 bp GTTCAGATAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGGTGAATGGCATGGGCAATaGAGCCTGCAGGGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: VQIIPQAQQDQGSNAGKGEWHGQ*SLQGLL
Trigger: CAGGAGGCCCTGCAGGCTTCATTGCCCATGCCATTC...ACCCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTATCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474057.6
3UTR-3UTR GCA 90 bp CAGAGAGCACAGGTAGAAGTCCGATGGGCTCCCTCCTCCTCCCACAGGCTGGTACACTATCAGCCACCGTaGGGACTCCAGGAACAAACC +
Preference number: 2 (lower is better)
Translates to: QRAQVEVRWAPSSSHRLVHYQPP*GLQEQT
Trigger: GGTTTGTTCCTGGAGTCCGCACGGTGGCTGATAGTG...TACCAGCCTGTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTGTGCTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR GCA 90 bp GGCCCACCAGCCCCAAGGTCAGCAGCACAATCCCGCGACGGCCAAATCTGTCTGAAGATGAAGAGGATCTaGTCCAGGATCACCTGCCAG +
Preference number: 2 (lower is better)
Translates to: GPPAPRSAAQSRDGQICLKMKRI*SRITCQ
Trigger: CTGGCAGGTGATCCTGGAGCAGATCCTCTTCATCTT...CAGACAGATTTGGCCGTCGCGGGATTGTGCTGCTGACCTTGGGGCTGGTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636431.2
3UTR-3UTR CCA 90 bp GTTCAGATAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGGTTCTTTGGGCGCAGGATaGAGCCCAGACCCAGTGGTT +
Preference number: 2 (lower is better)
Translates to: VQIIPQAQQDQGSNAGKGSLGAG*SPDPVV
Trigger: AACCACTGGGTCTGGGCTCCATCCTGCGCCCAAAGA...ACCCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTATCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR CCA 90 bp AAATCTGTCTGCGGGGTAACCCAGGAACAGGTAGCCGGAGGCAAAGCCCAAGATCACACCAGATCCCACTaGCCGATGGCGTTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: KSVCGVTQEQVAGGKAQDHTRSH*PMALVV
Trigger: CACCACCAACGCCATCGGCCAGTGGGATCTGGTGTG...ATCTTGGGCTTTGCCTCCGGCTACCTGTTCCTGGGTTACCCCGCAGACAGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636431.2
3UTR-3UTR GCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGTCTTCCCGATCTTCTTaGCACCTTTCTGTGTGGGCC +
Preference number: 2 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQSSRSS*HLSVWA
Trigger: GGCCCACACAGAAAGGTGGCAAGAAGATCGGGAAGA...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
3UTR-3UTR GCA 90 bp GATGGCAGCCTCGTTCAGATAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATTCTTCCCGATCTTCTTaGCACCTTTCTGTGTGGGCC +
Preference number: 2 (lower is better)
Translates to: DGSLVQIIPQAQQDQGSNSSRSS*HLSVWA
Trigger: GGCCCACACAGAAAGGTGGCAAGAAGATCGGGAAGA...ATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTATCTGAACGAGGCTGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR GCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCGGCCAAGGAAGTGAATaGAAAGCAGCAGGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPGQGSE*KAAGRR
Trigger: CCTCCTCCCTGCTGCTTTGCATTCACTTCCTTGGCC...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
3UTR-3UTR GCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATCTTCCCGATCTTCTTaGCACCTTTCTGTGTGGGCC +
Preference number: 2 (lower is better)
Translates to: WLQCGALSLSPDSGQGSESSRSS*HLSVWA
Trigger: GGCCCACACAGAAAGGTGGCAAGAAGATCGGGAAGA...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
3UTR-3UTR TCA 90 bp GTTGGTGAAGCCCAGGATAAGCAGATTTTTCCAGATGTTGCGGTAGTTGAGGAGATCCTCAGCACAGACTaGGCCTCCTCAATCTGCCGC +
Preference number: 2 (lower is better)
Translates to: VGEAQDKQIFPDVAVVEEILSTD*ASSICR
Trigger: GCGGCAGATTGAGGAGGCTCAGTCTGTGCTGAGGAT...CTCCTCAACTACCGCAACATCTGGAAAAATCTGCTTATCCTGGGCTTCACCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397260.7
3UTR-3UTR TCA 90 bp GTTGGTGAAGCCCAGGATAAGCAGATTTTTCCAGATGTTGCGGTAGTTGAGGAGGGATGCAGGGAGCGGTaGTCATTCGCTGTAGGAATC +
Preference number: 2 (lower is better)
Translates to: VGEAQDKQIFPDVAVVEEGCRER*SFAVGI
Trigger: GATTCCTACAGCGAATGATCACCGCTCCCTGCATCC...CTCCTCAACTACCGCAACATCTGGAAAAATCTGCTTATCCTGGGCTTCACCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397260.7
3UTR GCA 72 bp AGCAGCGGGACGTGGTCACAGCGGGTAGGGGGTGGCTaGCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCG +
Preference number: 3 (lower is better)
Translates to: SSGTWSQRVGGG*RSREGRRHSSP
Trigger: CGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTGTGACCACGTCCCGCTGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR CAA 90 bp AGCGGGACGTGGTCACAGCGGGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCCGGACCTCGGGCAGGAGCTaGCGCTTGGTCTCCGGCAGC +
Preference number: 3 (lower is better)
Translates to: SGTWSQRVGGGCRSREGRTSGRS*RLVSGS
Trigger: GCTGCCGGAGACCAAGCGCAAGCTCCTGCCCGAGGT...CCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTGTGACCACGTCCCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR CCA 72 bp CAGGCCGCCAGCACCACGTGCTGCAGGAAGGCTCCATaGCCCATGTGGAGGCGCTGGGCCGGGCCGCTCAGT +
Preference number: 3 (lower is better)
Translates to: QAASTTCCRKAP*PMWRRWAGPLS
Trigger: ACTGAGCGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR CCA 72 bp GGCAAGCAGCGGGACGTGGTCACAGCGGGTAGGGGGTaGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTC +
Preference number: 3 (lower is better)
Translates to: GKQRDVVTAGRG*LPQQGRPATQL
Trigger: GAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTGTGACCACGTCCCGCTGCTTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR CAA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCCCCGAAGCCTCTGGGTaGGGTCGCACAGCTCCAGGC +
Preference number: 3 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCPEASG*GRTAPG
Trigger: GCCTGGAGCTGTGCGACCCAACCCAGAGGCTTCGGG...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397260.7
3UTR CCA 72 bp AGCACCACGTGCTGCAGGAAGGCTCCATGGCCCATGTaGAGGCGCTGGGCCGGGCCGCTCAGTCCTCCAAGC +
Preference number: 3 (lower is better)
Translates to: STTCCRKAPWPM*RRWAGPLSPPS
Trigger: GCTTGGAGGACTGAGCGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR TCA 72 bp GGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTaGGGTGCCTCTGAGACTTCTGGGCAGCCCTGCCTT +
Preference number: 3 (lower is better)
Translates to: GDGPLSSPRWLA*GASETSGQPCL
Trigger: AAGGCAGGGCTGCCCAGAAGTCTCAGAGGCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
3UTR-3UTR CAA 90 bp AGGAGGGCGCAGGCCGCCAGCACCACGTGCTGCAGGAAGGCTCCATGGCCCATGTCTGGGTGGATGTCTTaGGGCGCAGGATGGAGCCCA +
Preference number: 3 (lower is better)
Translates to: RRAQAASTTCCRKAPWPMSGWMS*GAGWSP
Trigger: TGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGA...CATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGCCTGCGCCCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR CCA 72 bp GGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCAGTaGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGAC +
Preference number: 3 (lower is better)
Translates to: GCLWAQDGAQTQ*LQCGALSLSPD
Trigger: GTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCACTGGGTCTGGGCTCCATCCTGCGCCCAAAGACATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
3UTR CCA 72 bp ACTCAGTCTTCCCGATCTTCTTGCCACCTTTCTGTGTaGGCCAGCCTCCCGCCAGGGTACTCAGAGGCCGCT +
Preference number: 3 (lower is better)
Translates to: TQSSRSSCHLSV*ASLPPGYSEAA
Trigger: AGCGGCCTCTGAGTACCCTGGCGGGAGGCTGGCCCACACAGAAAGGTGGCAAGAAGATCGGGAAGACTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR TCA 72 bp GGCCGGTTTCGCTCAGCCAGGATCCTCAGCACAGACTaGGCCTCCTCAATCTGCCGCTTCACTATCAGCCAC +
Preference number: 3 (lower is better)
Translates to: GRFRSARILSTD*ASSICRFTISH
Trigger: GTGGCTGATAGTGAAGCGGCAGATTGAGGAGGCTCAGTCTGTGCTGAGGATCCTGGCTGAGCGAAACCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR CAA 90 bp CAGAGAGCACAGGTAGAAGTCCGATGGGCTCCCTCCTCCTCCCACAGGCTGGTAGTCTTCCCGATCTTCTaGCCACCTTTCTGTGTGGGC +
Preference number: 3 (lower is better)
Translates to: QRAQVEVRWAPSSSHRLVVFPIF*PPFCVG
Trigger: GCCCACACAGAAAGGTGGCAAGAAGATCGGGAAGAC...TACCAGCCTGTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTGTGCTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR-3UTR CAA 90 bp CACAGACTGAGCCTCCTCAATCTGCCGCTTCACTATCAGCCACCGTGCGGACTCGTCTTCCCGATCTTCTaGCCACCTTTCTGTGTGGGC +
Preference number: 3 (lower is better)
Translates to: HRLSLLNLPLHYQPPCGLVFPIF*PPFCVG
Trigger: GCCCACACAGAAAGGTGGCAAGAAGATCGGGAAGAC...GAGTCCGCACGGTGGCTGATAGTGAAGCGGCAGATTGAGGAGGCTCAGTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR TCA 72 bp AACCCAGGAACAGGTAGCCGGAGGCAAAGCCCAAGATaGAGAGGATCTGCTCCAGGATCACCTGCCAGCCCA +
Preference number: 3 (lower is better)
Translates to: NPGTGSRRQSPR*RGSAPGSPASP
Trigger: TGGGCTGGCAGGTGATCCTGGAGCAGATCCTCTTCATCTTGGGCTTTGCCTCCGGCTACCTGTTCCTGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636431.2
3UTR-3UTR CAA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGTCTTCCCGATCTTCTaGCCACCTTTCTGTGTGGGC +
Preference number: 3 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQVFPIF*PPFCVG
Trigger: GCCCACACAGAAAGGTGGCAAGAAGATCGGGAAGAC...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
3UTR-3UTR CAA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCGTCTTCCCGATCTTCTaGCCACCTTTCTGTGTGGGC +
Preference number: 3 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPVFPIF*PPFCVG
Trigger: GCCCACACAGAAAGGTGGCAAGAAGATCGGGAAGAC...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
3UTR CCA 72 bp ATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATaGAGCCCAGACCCAGTGGTTACAGTGTGGAGCTCT +
Preference number: 3 (lower is better)
Translates to: IMRSGWMSLGAG*SPDPVVTVWSS
Trigger: AGAGCTCCACACTGTAACCACTGGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GGGGTGGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCGTCCCGGAGCACGGGTAGGGGGTGGCTaGCGCAGCAGGGAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GVAAAAGKAGDTAPRPGARVGGG*RSREGR
Trigger: CCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACCCG...TGCTCCGGGACGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp GGGGTGGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCGTCCCGGAGCAGTGGGGACGGCCCTCTaGGCTCTCCGCGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: GVAAAAGKAGDTAPRPGAVGTAL*ALRDGW
Trigger: CCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCAC...TGCTCCGGGACGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp GGGGTGGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCGTCCCGGAGCACCCGCTCTGCAGCTCTaGAGCCGCGGGCGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GVAAAAGKAGDTAPRPGAPALQL*SRGRLL
Trigger: AAGGAGGCGCCCGCGGCTGCAGAGCTGCAGAGCGGG...TGCTCCGGGACGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474057.6
CDS-3UTR TCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGGCGGGGGCGCCAGCGTaGAGATGGGGTCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRAGAPA*RWGPRP
Trigger: TGGCCTCGGACCCCATCTTCACGCTGGCGCCCCCGC...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGCGGCCAGCGACAGGCTaGTGCCCAGTCCGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRRPATG*CPVRRR
Trigger: GCGGCGACGGACTGGGCAGCAGCCTGTCGCTGGCCG...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCCAGCAGAGGCCGAGCTaGAGCTGCTGGCCGCCGCCC +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCQQRPS*SCWPPP
Trigger: GGGCGGCGGCCAGCAGCTGCAGCTCGGCCTCTGCTG...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGCAGCAGAGGCCGAGCTaGAGCTGCTGGCCGCCGCCC +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRQQRPS*SCWPPP
Trigger: GGGCGGCGGCCAGCAGCTGCAGCTCGGCCTCTGCTG...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp AGCAGCGGGACGTGGTCACAGCGGGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCCGGGTAGGGGGTGGCTaGCGCAGCAGGGAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SSGTWSQRVGGGCRSREGRVGGG*RSREGR
Trigger: CCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACCCG...GCCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTGTGACCACGTCCCGCTGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCCACGGCTGGCGGCGCTaGCTGCTAGGGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCHGWRR*LLGQRW
Trigger: CCAGCGCTGCCCTAGCAGCCAGCGCCGCCAGCCGTG...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp GAAGGCCGGCGACACAGCTCCCCGTCCCGGAGCACCTCGGGCAGGAGCTTGCGCTGGTGGCGACACGGCTaGCGGCGCTGGCTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: EGRRHSSPSRSTSGRSLRWWRHG*RRWLLG
Trigger: CCCTAGCAGCCAGCGCCGCCAGCCGTGTCGCCACCA...GCGCAAGCTCCTGCCCGAGGTGCTCCGGGACGGGGAGCTGTGTCGCCGGCCTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GGGGTGGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCGTCCCGGAGCAAGGGAGGAGGCAGGGTaGGGACGGCCCTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: GVAAAAGKAGDTAPRPGAREEAG*GRPSEL
Trigger: GAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTCCCT...TGCTCCGGGACGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGCAGCGCTGGCGACGCTaGCGCCGCTGGCATTGGGAG +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRQRWRR*RRWHWE
Trigger: CTCCCAATGCCAGCGGCGTCAGCGTCGCCAGCGCTG...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCGACACAGGCCAGGGCTaGGGTGCCGCTGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCDTGQG*GAAGQQ
Trigger: CTGCTGGCCAGCGGCACCGCAGCCCTGGCCTGTGTC...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp AGCGGGACGTGGTCACAGCGGGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCCGGCCTGCAGCTGCTCCGTaGGCACCGCATCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SGTWSQRVGGGCRSREGRPAAAP*APHLRG
Trigger: CCCTCGGAGATGCGGTGCCCACGGAGCAGCTGCAGG...CCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTGTGACCACGTCCCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCTGGTGGCGACACGGCTaGCGGCGCTGGCTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCWWRHG*RRWLLG
Trigger: CCCTAGCAGCCAGCGCCGCCAGCCGTGTCGCCACCA...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp AGCAGCGGGACGTGGTCACAGCGGGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCTGGTGGCGACACGGCTaGCGGCGCTGGCTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: SSGTWSQRVGGGCRSREGWWRHG*RRWLLG
Trigger: CCCTAGCAGCCAGCGCCGCCAGCCGTGTCGCCACCA...GCCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTGTGACCACGTCCCGCTGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp GGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCGTCCCGTGGGGTCCGAGGCCATaGCCAGAGCCACGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GRGWLPQQGRPATQLPVPWGPRP*PEPRRA
Trigger: TGCTCTTCGTGGCTCTGGGCATGGCCTCGGACCCCA...CGGGACGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp CAGCACCACGTGCTGCAGGAAGGCTCCATGGCCCATGTGGAGGCGCTGGGCCGGGACACAGGCCAGGGCTaGGGTGCCGCTGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QHHVLQEGSMAHVEALGRDTGQG*GAAGQQ
Trigger: CTGCTGGCCAGCGGCACCGCAGCCCTGGCCTGTGTC...CCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCAAAGCTGAGGGGGCCTaGGGGCACGGCCAGCGACAG +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCKAEGA*GHGQRQ
Trigger: CTGTCGCTGGCCGTGCCCCCAGGCCCCCTCAGCTTT...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCACGAGGGGTCGGTACTaGTGGCGACACGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCTRGRY*WRHGWR
Trigger: CCGCCAGCCGTGTCGCCACCAGTACCGACCCCTCGT...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp CGTGCTGCAGGAAGGCTCCATGGCCCATGTGGAGGCGCTGGGCCGGGCCGCTCAACGAGGGGTCGGTACTaGTGGCGACACGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RAAGRLHGPCGGAGPGRSTRGRY*WRHGWR
Trigger: CCGCCAGCCGTGTCGCCACCAGTACCGACCCCTCGT...TGAGCGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp CAGGCCGCCAGCACCACGTGCTGCAGGAAGGCTCCATGGCCCATGTGGAGGCGCCCCATGTGGAGGCGCTaGGCCGGGCCGCTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: QAASTTCCRKAPWPMWRRPMWRR*AGPLSP
Trigger: AGGACTGAGCGGCCCGGCCCAGCGCCTCCACATGGG...GCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GGGGTGGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCGTCCCGGAGCATGCAGGAAGGCTCCATaGCCCATGTGGAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GVAAAAGKAGDTAPRPGACRKAP*PMWRRW
Trigger: CCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCA...TGCTCCGGGACGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCACAGCGGGTAGGGGGTaGCTGCCGCAGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCTAGRG*LPQQGR
Trigger: CCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTGT...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp AGGGAAGGCCGGCGACACAGCTCCCCGTCCCGGAGCACCTCGGGCAGGAGCTTGAGGGAGGAGGCAGGGTaGGGACGGCCCTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: REGRRHSSPSRSTSGRSLREEAG*GRPSEL
Trigger: GAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTCCCT...CAAGCTCCTGCCCGAGGTGCTCCGGGACGGGGAGCTGTGTCGCCGGCCTTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCGGAATCGGAGGGCCATaGCGCCTGTGGAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCGIGGP*RLWRSL
Trigger: CAGGCTCCTCCACAGGCGTCATGGCCCTCCGATTCC...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGCAGCAAGGAGGGTGCTaGGGATGGCGGCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRQQGGC*GWRQLG
Trigger: CCCAAGCTGCCGCCATCCTCAGCACCCTCCTTGCTG...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCCGCTCACCCTGCAGCTaGTCCGTGGGCACCGCATCT +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCRSPCS*SVGTAS
Trigger: AGATGCGGTGCCCACGGAGCAGCTGCAGGGTGAGCG...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp AGCAGCGGGACGTGGTCACAGCGGGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCGCCGCCAGCACCACGTaGTGCAGGAAGGCTCCATGG +
Preference number: 4 (lower is better)
Translates to: SSGTWSQRVGGGCRSREGAASTT*CRKAPW
Trigger: CCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGC...GCCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTGTGACCACGTCCCGCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGGCCGCCAGCACCACGTaGTGCAGGAAGGCTCCATGG +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRAASTT*CRKAPW
Trigger: CCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGC...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp AGGAGGGCGCAGGCCGCCAGCACCACGTGCTGCAGGAAGGCTCCATGGCCCATGGTCCTCTGGCTCAGTTaGGCGCCGGCTGCCCGGACA +
Preference number: 4 (lower is better)
Translates to: RRAQAASTTCCRKAPWPMVLWLS*APAART
Trigger: TGTCCGGGCAGCCGGCGCGCAACTGAGCCAGAGGAC...CATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGCCTGCGCCCTCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp ACAGCTCCCCGTCCCGGAGCACCTCGGGCAGGAGCTTGCGCTTGGTCTCCGGCAAAAGCTGAGGGGGCCTaGGGGCACGGCCAGCGACAG +
Preference number: 4 (lower is better)
Translates to: TAPRPGAPRAGACAWSPAKAEGA*GHGQRQ
Trigger: CTGTCGCTGGCCGTGCCCCCAGGCCCCCTCAGCTTT...TGCCGGAGACCAAGCGCAAGCTCCTGCCCGAGGTGCTCCGGGACGGGGAGCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCCCGAAGCCTCTGGGTTaGGTCGCACAGCTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCPKPLG*VAQLQA
Trigger: CGCCTGGAGCTGTGCGACCCAACCCAGAGGCTTCGG...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR CCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGGCCACCCGAAGCCTCTaGGTTGGGTCGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRATRSL*VGSHSS
Trigger: GGAGCTGTGCGACCCAACCCAGAGGCTTCGGGTGGC...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR CCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGCCCAGCATCTGCCCATaGGGCCGGTTTCGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRPSICP*GRFRSA
Trigger: GGCTGAGCGAAACCGGCCCCATGGGCAGATGCTGGG...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp AGGGTTGGGGGTGGCAAGCAGCGGGACGTGGTCACAGCGGGTAGGGGGTGGCTGACAGCGGGTAGGGGGTaGCTGCCGCAGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RVGGGKQRDVVTAGRGWLTAGRG*LPQQGR
Trigger: CCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTGT...CAGCCACCCCCTACCCGCTGTGACCACGTCCCGCTGCTTGCCACCCCCAACCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GAAGGCCGGCGACACAGCTCCCCGTCCCGGAGCACCTCGGGCAGGAGCTTGCGCCGCGACGGCCAAATCTaGCCGATGGCGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EGRRHSSPSRSTSGRSLRRDGQI*PMALVV
Trigger: CACCACCAACGCCATCGGCCAGATTTGGCCGTCGCG...GCGCAAGCTCCTGCCCGAGGTGCTCCGGGACGGGGAGCTGTGTCGCCGGCCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCCCGCGATGGCTGGCGTaGGGTGCCTCTGAGACTTCT +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCPRWLA*GASETS
Trigger: AGAAGTCTCAGAGGCACCTCACGCCAGCCATCGCGG...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGGGGTCCGAGGCCATaGCCAGAGCCACGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRWGPRP*PEPRRA
Trigger: TGCTCTTCGTGGCTCTGGGCATGGCCTCGGACCCCA...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GGGGTGGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCGTCCCGGAGCACTGGCATTGGGAGGCTaGTCCCAGCCAGAGGCATTA +
Preference number: 4 (lower is better)
Translates to: GVAAAAGKAGDTAPRPGALALGG*SQPEAL
Trigger: TAATGCCTCTGGCTGGGAGCAGCCTCCCAATGCCAG...TGCTCCGGGACGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCCCCAGGAACAGGAAGTaGCCTCCCACCCCCACCAAC +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCPRNRK*PPTPTN
Trigger: GTTGGTGGGGGTGGGAGGGCACTTCCTGTTCCTGGG...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR GCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGCCCAGGAACAGGAAGTaGCCTCCCACCCCCACCAAC +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRPRNRK*PPTPTN
Trigger: GTTGGTGGGGGTGGGAGGGCACTTCCTGTTCCTGGG...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR GCA 90 bp AGGGTTGGGGGTGGCAAGCAGCGGGACGTGGTCACAGCGGGTAGGGGGTGGCTGCCTCGGGCAGGAGCTTaGGCTTGGTCTCCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RVGGGKQRDVVTAGRGWLPRAGA*AWSPAA
Trigger: TGCTGCCGGAGACCAAGCGCAAGCTCCTGCCCGAGG...CAGCCACCCCCTACCCGCTGTGACCACGTCCCGCTGCTTGCCACCCCCAACCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp CTGCCAGGGCCACCCGAAGCCTCTGGGTTGGGTCGCACAGCTCCAGGCGCATCAGTCCTCTGGCTCAGTTaGGCGCCGGCTGCCCGGACA +
Preference number: 4 (lower is better)
Translates to: LPGPPEASGLGRTAPGASVLWLS*APAART
Trigger: TGTCCGGGCAGCCGGCGCGCAACTGAGCCAGAGGAC...TGATGCGCCTGGAGCTGTGCGACCCAACCCAGAGGCTTCGGGTGGCCCTGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397260.7
CDS-3UTR GCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGCCCGCGCCGAAAGGATaGGCTGTCCTCTGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRPAPKG*AVLWLS
Trigger: ACTGAGCCAGAGGACAGCGCATCCTTTCGGCGCGGG...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp AGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTGACCCCCAGGAAGACACAGCACGGCTGGCGGCGCTaGCTGCTAGGGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RRMPRRPNRSTVTPRKTQHGWRR*LLGQRW
Trigger: CCAGCGCTGCCCTAGCAGCCAGCGCCGCCAGCCGTG...CTGTGTCTTCCTGGGGGTCACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCAGGAAGGCTCCATaGCCCATGTGGAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRCRKAP*PMWRRW
Trigger: CCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCA...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp CAGGCCGCCAGCACCACGTGCTGCAGGAAGGCTCCATGGCCCATGTGGAGGCGCGCAAGCAGCGGGACGTaGTCACAGCGGGTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: QAASTTCCRKAPWPMWRRASSGT*SQRVGG
Trigger: ACCCCCTACCCGCTGTGACCACGTCCCGCTGCTTGC...GCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGGCTCTCCGCGATGGCTaGCGTGAGGTGCCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRALRDG*REVPLR
Trigger: TCTCAGAGGCACCTCACGCCAGCCATCGCGGAGAGC...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp AGCGGGACGTGGTCACAGCGGGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCCGGCTGGGTGGATGTCTTTaGGCGCAGGATGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SGTWSQRVGGGCRSREGRLGGCL*AQDGAQ
Trigger: CTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAG...CCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTGTGACCACGTCCCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp CAGCACCACGTGCTGCAGGAAGGCTCCATGGCCCATGTGGAGGCGCTGGGCCGGGGATGCGCTGTCCTCTaGCTCAGTTGCGCGCCGGCT +
Preference number: 4 (lower is better)
Translates to: QHHVLQEGSMAHVEALGRGCAVL*LSCAPA
Trigger: AGCCGGCGCGCAACTGAGCCAGAGGACAGCGCATCC...CCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCCAAATCGGTCCACGGTaGCCCCCAGGAAGACACAGG +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCQIGPR*PPGRHR
Trigger: CCTGTGTCTTCCTGGGGGTCACCGTGGACCGATTTG...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCGAATGGCATGGGCAATaGAGCCTGCAGGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCEWHGQ*SLQGLL
Trigger: CAGGAGGCCCTGCAGGCTTCATTGCCCATGCCATTC...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCTCCAGGATCACCTaGCAGCCCAGGTCACACACC +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRCSRIT*QPRSHT
Trigger: GGTGTGTGACCTGGGCTGGCAGGTGATCCTGGAGCA...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354772.9
ENST00000397267.5
CDS-3UTR GCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCTGCTCCAGGATCACCTaGCAGCCCAGGTCACACACC +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCCSRIT*QPRSHT
Trigger: GGTGTGTGACCTGGGCTGGCAGGTGATCCTGGAGCA...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354772.9
ENST00000397267.5
CDS-3UTR GCA 90 bp GAAGGCTCCATGGCCCATGTGGAGGCGCTGGGCCGGGCCGCTCAGTCCTCCAAGGTATTCTCCAGGTCCTaGAGGGCCTCCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: EGSMAHVEALGRAAQSSKVFSRS*RASWAS
Trigger: GGAGGCCCAGGAGGCCCTGCAGGACCTGGAGAATAC...CTTGGAGGACTGAGCGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397260.7
CDS-3UTR GCA 90 bp AGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTGACCCCCAGGAAGACACAGGACACAGGCCAGGGCTaGGGTGCCGCTGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RRMPRRPNRSTVTPRKTQDTGQG*GAAGQQ
Trigger: CTGCTGGCCAGCGGCACCGCAGCCCTGGCCTGTGTC...CTGTGTCTTCCTGGGGGTCACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGCAGTGTTGTCGATTTTaGCGCCGCCCCCGCCATTGG +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRQCCRF*RRPRHW
Trigger: CCAATGGCGGGGGCGGCGGCAAAATCGACAACACTG...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp CGTGCTGCAGGAAGGCTCCATGGCCCATGTGGAGGCGCTGGGCCGGGCCGCTCACAGTGTTGTCGATTTTaGCGCCGCCCCCGCCATTGG +
Preference number: 4 (lower is better)
Translates to: RAAGRLHGPCGGAGPGRSQCCRF*RRPRHW
Trigger: CCAATGGCGGGGGCGGCGGCAAAATCGACAACACTG...TGAGCGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp CCCGCGACGGCCAAATCTGTCTGCGGGGTAACCCAGGAACAGGTAGCCGGAGGCGTCCTCTGGCTCAGTTaGGCGCCGGCTGCCCGGACA +
Preference number: 4 (lower is better)
Translates to: PATAKSVCGVTQEQVAGGVLWLS*APAART
Trigger: TGTCCGGGCAGCCGGCGCGCAACTGAGCCAGAGGAC...GCCTCCGGCTACCTGTTCCTGGGTTACCCCGCAGACAGATTTGGCCGTCGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR CCA 90 bp GCCCACCAGCCCCAAGGTCAGCAGCACAATCCCGCGACGGCCAAATCTGTCTGCTGGTGGCGACACGGCTaGCGGCGCTGGCTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: AHQPQGQQHNPATAKSVCWWRHG*RRWLLG
Trigger: CCCTAGCAGCCAGCGCCGCCAGCCGTGTCGCCACCA...GCAGACAGATTTGGCCGTCGCGGGATTGTGCTGCTGACCTTGGGGCTGGTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR CCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGCACACCAGATCCCACTaGCCGATGGCGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRHTRSH*PMALVV
Trigger: CACCACCAACGCCATCGGCCAGTGGGATCTGGTGTG...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354772.9
ENST00000397267.5
CDS-3UTR CCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCCAGGTAGAAGTCCGATaGGCTCCCTCCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCQVEVR*APSSSH
Trigger: GTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTG...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp AGCAGCGGGACGTGGTCACAGCGGGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCAGGATGGCGGCAGCTTaGGAGGAGAAGAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SSGTWSQRVGGGCRSREGRMAAA*EEKSPR
Trigger: CCTTGGGCTCTTCTCCTCCCAAGCTGCCGCCATCCT...GCCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTGTGACCACGTCCCGCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCAGGATGGCGGCAGCTTaGGAGGAGAAGAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCRMAAA*EEKSPR
Trigger: CCTTGGGCTCTTCTCCTCCCAAGCTGCCGCCATCCT...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp AGGGAAGGCCGGCGACACAGCTCCCCGTCCCGGAGCACCTCGGGCAGGAGCTTGAGGATGGCGGCAGCTTaGGAGGAGAAGAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: REGRRHSSPSRSTSGRSLRMAAA*EEKSPR
Trigger: CCTTGGGCTCTTCTCCTCCCAAGCTGCCGCCATCCT...CAAGCTCCTGCCCGAGGTGCTCCGGGACGGGGAGCTGTGTCGCCGGCCTTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp AGGAGGGCGCAGGCCGCCAGCACCACGTGCTGCAGGAAGGCTCCATGGCCCATGTGCAGGAAGGCTCCATaGCCCATGTGGAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RRAQAASTTCCRKAPWPMCRKAP*PMWRRW
Trigger: CCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCA...CATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGCCTGCGCCCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCCTGGGTGGATGTCTTTaGGCGCAGGATGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCLGGCL*AQDGAQ
Trigger: CTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAG...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGATCCTCAGCACAGACTaGGCCTCCTCAATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRILSTD*ASSICR
Trigger: GCGGCAGATTGAGGAGGCTCAGTCTGTGCTGAGGAT...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp CAGGCCGCCAGCACCACGTGCTGCAGGAAGGCTCCATGGCCCATGTGGAGGCGCCAAATCGGTCCACGGTaGCCCCCAGGAAGACACAGG +
Preference number: 4 (lower is better)
Translates to: QAASTTCCRKAPWPMWRRQIGPR*PPGRHR
Trigger: CCTGTGTCTTCCTGGGGGTCACCGTGGACCGATTTG...GCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp AGCACAGGTAGAAGTCCGATGGGCTCCCTCCTCCTCCCACAGGCTGGTAGCAGTCGGCCAGCGACAGGCTaGTGCCCAGTCCGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: STGRSPMGSLLLPQAGSSRPATG*CPVRRR
Trigger: GCGGCGACGGACTGGGCAGCAGCCTGTCGCTGGCCG...ACTGCTACCAGCCTGTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCCTGGCATTGGGAGGCTaGTCCCAGCCAGAGGCATTA +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCLALGG*SQPEAL
Trigger: TAATGCCTCTGGCTGGGAGCAGCCTCCCAATGCCAG...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp TTTCTGTGTGGGCCAGCCTCCCGCCAGGGTACTCAGAGGCCGCTCAGAGGGCAGTCCTCCCCCAGCATCTaGCCATGGGGCCGGTTTCGC +
Preference number: 4 (lower is better)
Translates to: FLCGPASRQGTQRPLRGQSSPSI*PWGRFR
Trigger: GCGAAACCGGCCCCATGGGCAGATGCTGGGGGAGGA...CTGCCCTCTGAGCGGCCTCTGAGTACCCTGGCGGGAGGCTGGCCCACACAGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCTGGAGAGAAGAAGGATaGCCCGGCGGCCAAATCGGT +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCWREEG*PGGQIG
Trigger: ACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCA...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GAAGGCTCCATGGCCCATGTGGAGGCGCTGGGCCGGGCCGCTCAGTCCTCCAAGCAGTGTTGTCGATTTTaGCGCCGCCCCCGCCATTGG +
Preference number: 4 (lower is better)
Translates to: EGSMAHVEALGRAAQSSKQCCRF*RRPRHW
Trigger: CCAATGGCGGGGGCGGCGGCAAAATCGACAACACTG...CTTGGAGGACTGAGCGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp AGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTGACCCCCAGGAAGACACAGCAGTTGCGCGCCGGCTaGCCGGACACAGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: RRMPRRPNRSTVTPRKTQQLRAG*PDTDSS
Trigger: CGAGCTGTCTGTGTCCGGGCAGCCGGCGCGCAACTG...CTGTGTCTTCCTGGGGGTCACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp AAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTGACGCTCCATGGCCCATGTaGAGGCGCTGGGCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: KGHGEKKDAPAAKSVHGDAPWPM*RRWAGP
Trigger: CGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGC...GTCACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp AGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTGACCCCCAGGAAGACACAGGGGCAGGGTTGGGGGTaGCAAGCAGCGGGACGTGGT +
Preference number: 4 (lower is better)
Translates to: RRMPRRPNRSTVTPRKTQGQGWG*QAAGRG
Trigger: ACCACGTCCCGCTGCTTGCCACCCCCAACCCTGCCC...CTGTGTCTTCCTGGGGGTCACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCGGAGCCCAGACCCAGTaGTTACAGTGTGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCGAQTQ*LQCGAL
Trigger: GAGAGCTCCACACTGTAACCACTGGGTCTGGGCTCC...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTCTTTGGGCGCAGGATaGAGCCCAGACCCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRSLGAG*SPDPVV
Trigger: AACCACTGGGTCTGGGCTCCATCCTGCGCCCAAAGA...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCTCTTTGGGCGCAGGATaGAGCCCAGACCCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCSLGAG*SPDPVV
Trigger: AACCACTGGGTCTGGGCTCCATCCTGCGCCCAAAGA...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp AGGGTTGGGGGTGGCAAGCAGCGGGACGTGGTCACAGCGGGTAGGGGGTGGCTGCTGGGTGGATGTCTTTaGGCGCAGGATGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RVGGGKQRDVVTAGRGWLLGGCL*AQDGAQ
Trigger: CTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAG...CAGCCACCCCCTACCCGCTGTGACCACGTCCCGCTGCTTGCCACCCCCAACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp CCCGCGACGGCCAAATCTGTCTGCGGGGTAACCCAGGAACAGGTAGCCGGAGGCGGATGCGCTGTCCTCTaGCTCAGTTGCGCGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PATAKSVCGVTQEQVAGGGCAVL*LSCAPA
Trigger: AGCCGGCGCGCAACTGAGCCAGAGGACAGCGCATCC...GCCTCCGGCTACCTGTTCCTGGGTTACCCCGCAGACAGATTTGGCCGTCGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR CCA 90 bp CGTGCTGCAGGAAGGCTCCATGGCCCATGTGGAGGCGCTGGGCCGGGCCGCTCACAGTGGCGAATGGCATaGGCAATGAAGCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RAAGRLHGPCGGAGPGRSQWRMA*AMKPAG
Trigger: CCCTGCAGGCTTCATTGCCCATGCCATTCGCCACTG...TGAGCGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474057.6
CDS-3UTR TCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGCGATGGCGTTGGTGGTaGGCACAGGAAGGCCATTAT +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRRWRWW*AQEGHY
Trigger: ATAATGGCCTTCCTGTGCTCACCACCAACGCCATCG...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp CGTGCTGCAGGAAGGCTCCATGGCCCATGTGGAGGCGCTGGGCCGGGCCGCTCAGGATGCAGGGAGCGGTaGTCATTCGCTGTAGGAATC +
Preference number: 4 (lower is better)
Translates to: RAAGRLHGPCGGAGPGRSGCRER*SFAVGI
Trigger: GATTCCTACAGCGAATGATCACCGCTCCCTGCATCC...TGAGCGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397260.7
CDS-3UTR TCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCCTCTGGCCAAGGAAGTaGATGCAAAGCAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCLWPRK*MQSSRE
Trigger: CTCCCTGCTGCTTTGCATTCACTTCCTTGGCCAGAG...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGCGTTGGAGGTGGGGGTaGTCTCTACAGTGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRRWRWG*SLQCCR
Trigger: TCGACAACACTGTAGAGATCACCCCCACCTCCAACG...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp AGCCTCGTTCAGATAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTCGGCCAGCGACAGGCTaGTGCCCAGTCCGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: SLVQIIPQAQQDQGSNAGRPATG*CPVRRR
Trigger: GCGGCGACGGACTGGGCAGCAGCCTGTCGCTGGCCG...ACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTATCTGAACGAGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGACGGCCAAATCTGTCTaGGGGGTAACCCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRTAKSV*GVTQEQ
Trigger: CTGTTCCTGGGTTACCCCGCAGACAGATTTGGCCGT...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354772.9
ENST00000397267.5
CDS-3UTR GCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGCACTATCAGCCACCGTaGGGACTCCAGGAACAAACC +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRHYQPP*GLQEQT
Trigger: GGTTTGTTCCTGGAGTCCGCACGGTGGCTGATAGTG...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GGATGCTCACAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGGACACAGGCCAGGGCTaGGGTGCCGCTGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GCSQSHRPSRTREAMPVRDTGQG*GAAGQQ
Trigger: CTGCTGGCCAGCGGCACCGCAGCCCTGGCCTGTGTC...CCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTGTGAGCATCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474774.1
CDS-3UTR GCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCGGCCAAGGAAGTGAATaGAAAGCAGCAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCGQGSE*KAAGRR
Trigger: CCTCCTCCCTGCTGCTTTGCATTCACTTCCTTGGCC...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGGGCCAAGGAAGTGAATaGAAAGCAGCAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRGQGSE*KAAGRR
Trigger: CCTCCTCCCTGCTGCTTTGCATTCACTTCCTTGGCC...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp CCCTCCTACTCCACAGGGGCCCACCAGCCCCAAGGTCAGCAGCACAATCCCGCGCAGTGTTGTCGATTTTaGCGCCGCCCCCGCCATTGG +
Preference number: 4 (lower is better)
Translates to: PSYSTGAHQPQGQQHNPAQCCRF*RRPRHW
Trigger: CCAATGGCGGGGGCGGCGGCAAAATCGACAACACTG...CGCGGGATTGTGCTGCTGACCTTGGGGCTGGTGGGCCCCTGTGGAGTAGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR GCA 90 bp AATCCCGCGACGGCCAAATCTGTCTGCGGGGTAACCCAGGAACAGGTAGCCGGACCCGCTCTGCAGCTCTaGAGCCGCGGGCGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: NPATAKSVCGVTQEQVAGPALQL*SRGRLL
Trigger: AAGGAGGCGCCCGCGGCTGCAGAGCTGCAGAGCGGG...TCCGGCTACCTGTTCCTGGGTTACCCCGCAGACAGATTTGGCCGTCGCGGGATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR GCA 90 bp CAATCCCGCGACGGCCAAATCTGTCTGCGGGGTAACCCAGGAACAGGTAGCCGGCAGTTGCGCGCCGGCTaGCCGGACACAGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: QSRDGQICLRGNPGTGSRQLRAG*PDTDSS
Trigger: CGAGCTGTCTGTGTCCGGGCAGCCGGCGCGCAACTG...CCGGCTACCTGTTCCTGGGTTACCCCGCAGACAGATTTGGCCGTCGCGGGATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR GCA 90 bp CACCAGCCCCAAGGTCAGCAGCACAATCCCGCGACGGCCAAATCTGTCTGCGGGTGGGAGGCCTGCAGCTaGTCCGTGGGCACCGCATCT +
Preference number: 4 (lower is better)
Translates to: HQPQGQQHNPATAKSVCGWEACS*SVGTAS
Trigger: AGATGCGGTGCCCACGGAGCAGCTGCAGGCCTCCCA...CCCGCAGACAGATTTGGCCGTCGCGGGATTGTGCTGCTGACCTTGGGGCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR CCA 90 bp GTCACACACCAGATCCCACTGGCCGATGGCGTTGGTGGTGAGCACAGGAAGGCCCCTGCAGCTGCTCCGTaGGCACCGCATCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: VTHQIPLADGVGGEHRKAPAAAP*APHLRG
Trigger: CCCTCGGAGATGCGGTGCCCACGGAGCAGCTGCAGG...GGCCTTCCTGTGCTCACCACCAACGCCATCGGCCAGTGGGATCTGGTGTGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR CCA 90 bp CACAGACTGAGCCTCCTCAATCTGCCGCTTCACTATCAGCCACCGTGCGGACTCCACGGCTGGCGGCGCTaGCTGCTAGGGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: HRLSLLNLPLHYQPPCGLHGWRR*LLGQRW
Trigger: CCAGCGCTGCCCTAGCAGCCAGCGCCGCCAGCCGTG...GAGTCCGCACGGTGGCTGATAGTGAAGCGGCAGATTGAGGAGGCTCAGTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp AATCCCGCGACGGCCAAATCTGTCTGCGGGGTAACCCAGGAACAGGTAGCCGGAAGGGGTCGGTACTGGTaGCGACACGGCTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: NPATAKSVCGVTQEQVAGRGRYW*RHGWRR
Trigger: GCGCCGCCAGCCGTGTCGCCACCAGTACCGACCCCT...TCCGGCTACCTGTTCCTGGGTTACCCCGCAGACAGATTTGGCCGTCGCGGGATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR CCA 90 bp GCCGGTAAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACACAGCGGGTAGGGGGTaGCTGCCGCAGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AGKGHGEKKDAPAAKSVHTAGRG*LPQQGR
Trigger: CCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTGT...GTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTTACCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGCGGGGGCGCCAGCGTaGAGATGGGGTCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAAGAPA*RWGPRP
Trigger: TGGCCTCGGACCCCATCTTCACGCTGGCGCCCCCGC...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp CAGCACCACGTGCTGCAGGAAGGCTCCATGGCCCATGTGGAGGCGCTGGGCCGGCGATGGCGTTGGTGGTaGGCACAGGAAGGCCATTAT +
Preference number: 4 (lower is better)
Translates to: QHHVLQEGSMAHVEALGRRWRWW*AQEGHY
Trigger: ATAATGGCCTTCCTGTGCTCACCACCAACGCCATCG...CCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCGGACAGAGAAAGTGGTaGTGGCAGCCTCGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCGQRKW*WQPRSD
Trigger: ATCTGAACGAGGCTGCCATCACCACTTTCTCTGTCC...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp AGCCTCGTTCAGATAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTGCGCCCCTAGAGCCATaGTCAGGCCCAGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: SLVQIIPQAQQDQGSNAGAPLEP*SGPGHG
Trigger: GCCGTGGCCTGGGCCTGATCATGGCTCTAGGGGCGC...ACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTATCTGAACGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp AGCAATGCCGGTAAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTGGGGACGGCCCTCTaGGCTCTCCGCGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: SNAGKGHGEKKDAPAAKSVGTAL*ALRDGW
Trigger: CCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCAC...CGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTTACCGGCATTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGCCAGCGACAGGCTGCTaGCCAGTCCGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQPATGC*PVRRRP
Trigger: CGGGCGGCGACGGACTGGGCAGCAGCCTGTCGCTGG...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCACGGCCAGCGACAGGCTaGTGCCCAGTCCGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAARPATG*CPVRRR
Trigger: GCGGCGACGGACTGGGCAGCAGCCTGTCGCTGGCCG...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGCAGCAGAGGCCGAGCTaGAGCTGCTGGCCGCCGCCC +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQQQRPS*SCWPPP
Trigger: GGGCGGCGGCCAGCAGCTGCAGCTCGGCCTCTGCTG...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp AGGGTTGGGGGTGGCAAGCAGCGGGACGTGGTCACAGCGGGTAGGGGGTGGCTGCACTATCAGCCACCGTaGGGACTCCAGGAACAAACC +
Preference number: 4 (lower is better)
Translates to: RVGGGKQRDVVTAGRGWLHYQPP*GLQEQT
Trigger: GGTTTGTTCCTGGAGTCCGCACGGTGGCTGATAGTG...CAGCCACCCCCTACCCGCTGTGACCACGTCCCGCTGCTTGCCACCCCCAACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp AGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTGACCTCCTCCCCCAGCATCTaGCCATGGGGCCGGTTTCGC +
Preference number: 4 (lower is better)
Translates to: RVMERRRMPRRPNRSTVTSSPSI*PWGRFR
Trigger: GCGAAACCGGCCCCATGGGCAGATGCTGGGGGAGGA...GGTCACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp GCCGGTAAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGCCGCCAGCACCACGTaGTGCAGGAAGGCTCCATGG +
Preference number: 4 (lower is better)
Translates to: AGKGHGEKKDAPAAKSVHAASTT*CRKAPW
Trigger: CCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGC...GTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTTACCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp CAGGCCGCCAGCACCACGTGCTGCAGGAAGGCTCCATGGCCCATGTGGAGGCGCGGCCAAGGAAGTGAATaGAAAGCAGCAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QAASTTCCRKAPWPMWRRGQGSE*KAAGRR
Trigger: CCTCCTCCCTGCTGCTTTGCATTCACTTCCTTGGCC...GCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp ACCAGCCCCAAGGTCAGCAGCACAATCCCGCGACGGCCAAATCTGTCTGCGGGGCCCGCGCCGAAAGGATaGGCTGTCCTCTGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: TSPKVSSTIPRRPNLSAGPAPKG*AVLWLS
Trigger: ACTGAGCCAGAGGACAGCGCATCCTTTCGGCGCGGG...CCCCGCAGACAGATTTGGCCGTCGCGGGATTGTGCTGCTGACCTTGGGGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR CCA 90 bp AAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTGACAAAGCTGAGGGGGCCTaGGGGCACGGCCAGCGACAG +
Preference number: 4 (lower is better)
Translates to: KGHGEKKDAPAAKSVHGDKAEGA*GHGQRQ
Trigger: CTGTCGCTGGCCGTGCCCCCAGGCCCCCTCAGCTTT...GTCACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp AGCCTCGTTCAGATAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAGGGGTCGGTACTGGTaGCGACACGGCTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: SLVQIIPQAQQDQGSNAGRGRYW*RHGWRR
Trigger: GCGCCGCCAGCCGTGTCGCCACCAGTACCGACCCCT...ACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTATCTGAACGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp AGGTCACACACCAGATCCCACTGGCCGATGGCGTTGGTGGTGAGCACAGGAAGGACGAGGGGTCGGTACTaGTGGCGACACGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RSHTRSHWPMALVVSTGRTRGRY*WRHGWR
Trigger: CCGCCAGCCGTGTCGCCACCAGTACCGACCCCTCGT...CCTTCCTGTGCTCACCACCAACGCCATCGGCCAGTGGGATCTGGTGTGTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR CCA 90 bp TTTCTGTGTGGGCCAGCCTCCCGCCAGGGTACTCAGAGGCCGCTCAGAGGGCAGCAGGTAGAAGTCCGATaGGCTCCCTCCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: FLCGPASRQGTQRPLRGQQVEVR*APSSSH
Trigger: GTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTG...CTGCCCTCTGAGCGGCCTCTGAGTACCCTGGCGGGAGGCTGGCCCACACAGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGCGTTCAGATCTCTGTTaGGGTTCCCTTGTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRRSDLC*GSLVEP
Trigger: GGGCTCAACAAGGGAACCCCAACAGAGATCTGAACG...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397267.5
CDS-3UTR CCA 90 bp AGCAATGCCGGTAAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGCCCATGTGGAGGCGCTaGGCCGGGCCGCTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SNAGKGHGEKKDAPAAKSPMWRR*AGPLSP
Trigger: AGGACTGAGCGGCCCGGCCCAGCGCCTCCACATGGG...CGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTTACCGGCATTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGCTCCATGGCCCATGTaGAGGCGCTGGGCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQAPWPM*RRWAGP
Trigger: CGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGC...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp TCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGGTCATGGAGAGAGGGCAGGGTTGGGGGTaGCAAGCAGCGGGACGTGGT +
Preference number: 4 (lower is better)
Translates to: SHRPSRTREAMPVRVMERGQGWG*QAAGRG
Trigger: ACCACGTCCCGCTGCTTGCCACCCCCAACCCTGCCC...TCTCTCCATGACCCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp CTGCCAGGGCCACCCGAAGCCTCTGGGTTGGGTCGCACAGCTCCAGGCGCATCAGGAGCCCAGACCCAGTaGTTACAGTGTGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LPGPPEASGLGRTAPGASGAQTQ*LQCGAL
Trigger: GAGAGCTCCACACTGTAACCACTGGGTCTGGGCTCC...TGATGCGCCTGGAGCTGTGCGACCCAACCCAGAGGCTTCGGGTGGCCCTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397260.7
3UTR CAA 72 bp TCCCCGTCCCGGAGCACCTCGGGCAGGAGCTTGCGCTaGGTCTCCGGCAGCAGCATAATGCTGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: SPSRSTSGRSLR*VSGSSIMLRMQ
Trigger: CTGCATTCTCAGCATTATGCTGCTGCCGGAGACCAAGCGCAAGCTCCTGCCCGAGGTGCTCCGGGACGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp GGTAAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTCAGCAAGGAGGGTGCTaGGGATGGCGGCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GKGHGEKKDAPAAKSVHGQQGGC*GWRQLG
Trigger: CCCAAGCTGCCGCCATCCTCAGCACCCTCCTTGCTG...ACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGCGCCCCTAGAGCCATaGTCAGGCCCAGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAAPLEP*SGPGHG
Trigger: GCCGTGGCCTGGGCCTGATCATGGCTCTAGGGGCGC...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCCAGCAGAGGCCGAGCTaGAGCTGCTGGCCGCCGCCC +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPQQRPS*SCWPPP
Trigger: GGGCGGCGGCCAGCAGCTGCAGCTCGGCCTCTGCTG...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GCCGGTAAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACTGGGGTCCGAGGCCATaGCCAGAGCCACGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: AGKGHGEKKDAPAAKSVHWGPRP*PEPRRA
Trigger: TGCTCTTCGTGGCTCTGGGCATGGCCTCGGACCCCA...GTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTTACCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGCGGGGCGAAGCCGCTaGACGAGGGGTCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQAGRSR*TRGRYW
Trigger: CCAGTACCGACCCCTCGTGCAGCGGCTTCGCCCCGC...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGCGGGGCGAAGCCGCTaGACGAGGGGTCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAAGRSR*TRGRYW
Trigger: CCAGTACCGACCCCTCGTGCAGCGGCTTCGCCCCGC...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp CAAATCTGTCTGCGGGGTAACCCAGGAACAGGTAGCCGGAGGCAAAGCCCAAGAGCGGGGCGAAGCCGCTaGACGAGGGGTCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: QICLRGNPGTGSRRQSPRAGRSR*TRGRYW
Trigger: CCAGTACCGACCCCTCGTGCAGCGGCTTCGCCCCGC...TCTTGGGCTTTGCCTCCGGCTACCTGTTCCTGGGTTACCCCGCAGACAGATTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR GCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCAAGATGAAGAGGATCTaGTCCAGGATCACCTGCCAG +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCKMKRI*SRITCQ
Trigger: CTGGCAGGTGATCCTGGAGCAGATCCTCTTCATCTT...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354772.9
ENST00000397267.5
CDS-3UTR GCA 90 bp CACAGACTGAGCCTCCTCAATCTGCCGCTTCACTATCAGCCACCGTGCGGACTCCCCCACCAACTCCCCTaGCAGGGCCACCCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: HRLSLLNLPLHYQPPCGLPHQLP*QGHPKP
Trigger: AGGCTTCGGGTGGCCCTGGCAGGGGAGTTGGTGGGG...GAGTCCGCACGGTGGCTGATAGTGAAGCGGCAGATTGAGGAGGCTCAGTCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397260.7
CDS-3UTR GCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAACGGGTAGGGGGTGGCTaGCGCAGCAGGGAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSERVGGG*RSREGR
Trigger: CCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACCCG...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCACCCGCTCTGCAGCTCTaGAGCCGCGGGCGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAPALQL*SRGRLL
Trigger: AAGGAGGCGCCCGCGGCTGCAGAGCTGCAGAGCGGG...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp AAATCTGTCTGCGGGGTAACCCAGGAACAGGTAGCCGGAGGCAAAGCCCAAGATCACGGCTGGCGGCGCTaGCTGCTAGGGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: KSVCGVTQEQVAGGKAQDHGWRR*LLGQRW
Trigger: CCAGCGCTGCCCTAGCAGCCAGCGCCGCCAGCCGTG...ATCTTGGGCTTTGCCTCCGGCTACCTGTTCCTGGGTTACCCCGCAGACAGATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR CCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGTGGTGGCGACACGGCTaGCGGCGCTGGCTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQWWRHG*RRWLLG
Trigger: CCCTAGCAGCCAGCGCCGCCAGCCGTGTCGCCACCA...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAAGGGGTCGGTACTGGTaGCGACACGGCTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAARGRYW*RHGWRR
Trigger: GCGCCGCCAGCCGTGTCGCCACCAGTACCGACCCCT...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp GTAAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTGCCCAGCATCTGCCCATaGGGCCGGTTTCGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VRVMERRRMPRRPNRSTVPSICP*GRFRSA
Trigger: GGCTGAGCGAAACCGGCCCCATGGGCAGATGCTGGG...CACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAGCTCCATGGCCCATGTaGAGGCGCTGGGCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEAPWPM*RRWAGP
Trigger: CGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGC...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp CCACCGTGCGGACTCCAGGAACAAACCAGGCCAGCCATAAAACAGGAAGAGGATGCTCCATGGCCCATGTaGAGGCGCTGGGCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: PPCGLQEQTRPAIKQEEDAPWPM*RRWAGP
Trigger: CGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGC...ATCCTCTTCCTGTTTTATGGCTGGCCTGGTTTGTTCCTGGAGTCCGCACGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GTAAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTGCTCAGAGGGCAGGGTTaGGGGTGGCAAGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: VRVMERRRMPRRPNRSTVLRGQG*GWQAAG
Trigger: TCCCGCTGCTTGCCACCCCCAACCCTGCCCTCTGAG...CACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGATAATGAGGTCTGGGTaGATGTCTTTGGGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRIMRSG*MSLGAG
Trigger: TCCTGCGCCCAAAGACATCCACCCAGACCTCATTAT...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp CAAACCAGGCCAGCCATAAAACAGGAAGAGGATGCAGGGAGCGGTGATCATTCGGCGGGGGCGCCAGCGTaGAGATGGGGTCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QTRPAIKQEEDAGSGDHSAGAPA*RWGPRP
Trigger: TGGCCTCGGACCCCATCTTCACGCTGGCGCCCCCGC...CGAATGATCACCGCTCCCTGCATCCTCTTCCTGTTTTATGGCTGGCCTGGTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp AGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTGACCCAAATCGGTCCACGGTaGCCCCCAGGAAGACACAGG +
Preference number: 4 (lower is better)
Translates to: RVMERRRMPRRPNRSTVTQIGPR*PPGRHR
Trigger: CCTGTGTCTTCCTGGGGGTCACCGTGGACCGATTTG...GGTCACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp AGCACAGGTAGAAGTCCGATGGGCTCCCTCCTCCTCCCACAGGCTGGTAGCAGTGGACAGTGGTGGGGATaGCCTCAGCAGCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: STGRSPMGSLLLPQAGSSGQWWG*PQQQGG
Trigger: CCCTCCTTGCTGCTGAGGTCATCCCCACCACTGTCC...ACTGCTACCAGCCTGTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp CCACCGTGCGGACTCCAGGAACAAACCAGGCCAGCCATAAAACAGGAAGAGGATGCGCCCCTAGAGCCATaGTCAGGCCCAGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: PPCGLQEQTRPAIKQEEDAPLEP*SGPGHG
Trigger: GCCGTGGCCTGGGCCTGATCATGGCTCTAGGGGCGC...ATCCTCTTCCTGTTTTATGGCTGGCCTGGTTTGTTCCTGGAGTCCGCACGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAGCGCCCCTAGAGCCATaGTCAGGCCCAGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEAPLEP*SGPGHG
Trigger: GCCGTGGCCTGGGCCTGATCATGGCTCTAGGGGCGC...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCGTGGGGACGGCCCTCTaGGCTCTCCGCGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPVGTAL*ALRDGW
Trigger: CCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCAC...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GTCACACACCAGATCCCACTGGCCGATGGCGTTGGTGGTGAGCACAGGAAGGCCTGCTCCAGGATCACCTaGCAGCCCAGGTCACACACC +
Preference number: 4 (lower is better)
Translates to: VTHQIPLADGVGGEHRKACSRIT*QPRSHT
Trigger: GGTGTGTGACCTGGGCTGGCAGGTGATCCTGGAGCA...GGCCTTCCTGTGCTCACCACCAACGCCATCGGCCAGTGGGATCTGGTGTGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR GCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCACCCCACCAACTCCCCTaGCAGGGCCACCCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAPHQLP*QGHPKP
Trigger: AGGCTTCGGGTGGCCCTGGCAGGGGAGTTGGTGGGG...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR GCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCGACACAGGCCAGGGCTaGGGTGCCGCTGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPDTGQG*GAAGQQ
Trigger: CTGCTGGCCAGCGGCACCGCAGCCCTGGCCTGTGTC...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp CACAGACTGAGCCTCCTCAATCTGCCGCTTCACTATCAGCCACCGTGCGGACTCGAAGAGATCCCGCTCTaGAGCTCTGCAGCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: HRLSLLNLPLHYQPPCGLEEIPL*SSAAAG
Trigger: GCCCGCGGCTGCAGAGCTGCAGAGCGGGATCTCTTC...GAGTCCGCACGGTGGCTGATAGTGAAGCGGCAGATTGAGGAGGCTCAGTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474057.6
CDS-3UTR GCA 90 bp AATCTGCCGCTTCACTATCAGCCACCGTGCGGACTCCAGGAACAAACCAGGCCACAGTTGCGCGCCGGCTaGCCGGACACAGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: NLPLHYQPPCGLQEQTRPQLRAG*PDTDSS
Trigger: CGAGCTGTCTGTGTCCGGGCAGCCGGCGCGCAACTG...TGGCCTGGTTTGTTCCTGGAGTCCGCACGGTGGCTGATAGTGAAGCGGCAGATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGTCCTCTGGCTCAGTTaGGCGCCGGCTGCCCGGACA +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAVLWLS*APAART
Trigger: TGTCCGGGCAGCCGGCGCGCAACTGAGCCAGAGGAC...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp CAGAGAGCACAGGTAGAAGTCCGATGGGCTCCCTCCTCCTCCCACAGGCTGGTACCCGCGCCGAAAGGATaGGCTGTCCTCTGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: QRAQVEVRWAPSSSHRLVPAPKG*AVLWLS
Trigger: ACTGAGCCAGAGGACAGCGCATCCTTTCGGCGCGGG...TACCAGCCTGTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTGTGCTCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp TCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGGTCATGGAGAGAATGGGCAATGAAGCCTaGAGGGCCTCCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SHRPSRTREAMPVRVMERMGNEA*RASWAS
Trigger: GGAGGCCCAGGAGGCCCTGCAGGCTTCATTGCCCAT...TCTCTCCATGACCCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGCCTGCAGCTGCTCCGTaGGCACCGCATCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQPAAAP*APHLRG
Trigger: CCCTCGGAGATGCGGTGCCCACGGAGCAGCTGCAGG...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp TCAATCTGCCGCTTCACTATCAGCCACCGTGCGGACTCCAGGAACAAACCAGGCCCTGCAGCTGCTCCGTaGGCACCGCATCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SICRFTISHRADSRNKPGPAAAP*APHLRG
Trigger: CCCTCGGAGATGCGGTGCCCACGGAGCAGCTGCAGG...GCCTGGTTTGTTCCTGGAGTCCGCACGGTGGCTGATAGTGAAGCGGCAGATTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCACCTGCAGCTGCTCCGTaGGCACCGCATCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAPAAAP*APHLRG
Trigger: CCCTCGGAGATGCGGTGCCCACGGAGCAGCTGCAGG...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCAGGGGTCGGTACTGGTaGCGACACGGCTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPRGRYW*RHGWRR
Trigger: GCGCCGCCAGCCGTGTCGCCACCAGTACCGACCCCT...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp CCACCGTGCGGACTCCAGGAACAAACCAGGCCAGCCATAAAACAGGAAGAGGATAGGGGTCGGTACTGGTaGCGACACGGCTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PPCGLQEQTRPAIKQEEDRGRYW*RHGWRR
Trigger: GCGCCGCCAGCCGTGTCGCCACCAGTACCGACCCCT...ATCCTCTTCCTGTTTTATGGCTGGCCTGGTTTGTTCCTGGAGTCCGCACGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGACGAGGGGTCGGTACTaGTGGCGACACGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQTRGRY*WRHGWR
Trigger: CCGCCAGCCGTGTCGCCACCAGTACCGACCCCTCGT...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAACGAGGGGTCGGTACTaGTGGCGACACGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAATRGRY*WRHGWR
Trigger: CCGCCAGCCGTGTCGCCACCAGTACCGACCCCTCGT...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp ACCTCGGGCAGGAGCTTGCGCTTGGTCTCCGGCAGCAGCATAATGCTGAGAATGCCCAGCATCTGCCCATaGGGCCGGTTTCGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TSGRSLRLVSGSSIMLRMPSICP*GRFRSA
Trigger: GGCTGAGCGAAACCGGCCCCATGGGCAGATGCTGGG...CATTCTCAGCATTATGCTGCTGCCGGAGACCAAGCGCAAGCTCCTGCCCGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCCCCATGTGGAGGCGCTaGGCCGGGCCGCTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPPMWRR*AGPLSP
Trigger: AGGACTGAGCGGCCCGGCCCAGCGCCTCCACATGGG...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAACCCATGTGGAGGCGCTaGGCCGGGCCGCTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEPMWRR*AGPLSP
Trigger: AGGACTGAGCGGCCCGGCCCAGCGCCTCCACATGGG...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGACAGCGGGTAGGGGGTaGCTGCCGCAGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQTAGRG*LPQQGR
Trigger: CCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTGT...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp ACCTCGGGCAGGAGCTTGCGCTTGGTCTCCGGCAGCAGCATAATGCTGAGAATGGCAAGCAGCGGGACGTaGTCACAGCGGGTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: TSGRSLRLVSGSSIMLRMASSGT*SQRVGG
Trigger: ACCCCCTACCCGCTGTGACCACGTCCCGCTGCTTGC...CATTCTCAGCATTATGCTGCTGCCGGAGACCAAGCGCAAGCTCCTGCCCGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGGCAGGGTTGGGGGTaGCAAGCAGCGGGACGTGGT +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAGQGWG*QAAGRG
Trigger: ACCACGTCCCGCTGCTTGCCACCCCCAACCCTGCCC...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGGGCAGGGTTGGGGGTaGCAAGCAGCGGGACGTGGT +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQGQGWG*QAAGRG
Trigger: ACCACGTCCCGCTGCTTGCCACCCCCAACCCTGCCC...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCAGAAATAATGAGGTCTaGGTGGATGTCTTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCRNNEV*VDVFGR
Trigger: GCGCCCAAAGACATCCACCCAGACCTCATTATTTCT...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp CAGAGAGCACAGGTAGAAGTCCGATGGGCTCCCTCCTCCTCCCACAGGCTGGTACGCGACGGCCAAATCTaGCCGATGGCGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QRAQVEVRWAPSSSHRLVRDGQI*PMALVV
Trigger: CACCACCAACGCCATCGGCCAGATTTGGCCGTCGCG...TACCAGCCTGTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTGTGCTCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGAATCGGAGGGCCATaGCGCCTGTGGAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAGIGGP*RLWRSL
Trigger: CAGGCTCCTCCACAGGCGTCATGGCCCTCCGATTCC...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp GGATGCTCACAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGCAAATCGGTCCACGGTaGCCCCCAGGAAGACACAGG +
Preference number: 4 (lower is better)
Translates to: GCSQSHRPSRTREAMPVRQIGPR*PPGRHR
Trigger: CCTGTGTCTTCCTGGGGGTCACCGTGGACCGATTTG...CCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTGTGAGCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474774.1
CDS-3UTR TCA 90 bp GTTCAGATAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGGTCAGCAAGGAGGGTGCTaGGGATGGCGGCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: VQIIPQAQQDQGSNAGKGQQGGC*GWRQLG
Trigger: CCCAAGCTGCCGCCATCCTCAGCACCCTCCTTGCTG...ACCCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTATCTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGCGTGAGGTGCCTCTaGGACTTCTGGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAGVRCL*DFWAAL
Trigger: CAGGGCTGCCCAGAAGTCTCAGAGGCACCTCACGCC...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GTTCAGATAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGGTCGCTCACCCTGCAGCTaGTCCGTGGGCACCGCATCT +
Preference number: 4 (lower is better)
Translates to: VQIIPQAQQDQGSNAGKGRSPCS*SVGTAS
Trigger: AGATGCGGTGCCCACGGAGCAGCTGCAGGGTGAGCG...ACCCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTATCTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp TCCTCAGCACAGACTGAGCCTCCTCAATCTGCCGCTTCACTATCAGCCACCGTGCGCTCACCCTGCAGCTaGTCCGTGGGCACCGCATCT +
Preference number: 4 (lower is better)
Translates to: SSAQTEPPQSAASLSATVRSPCS*SVGTAS
Trigger: AGATGCGGTGCCCACGGAGCAGCTGCAGGGTGAGCG...CACGGTGGCTGATAGTGAAGCGGCAGATTGAGGAGGCTCAGTCTGTGCTGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp AGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTGACCCTGGCATTGGGAGGCTaGTCCCAGCCAGAGGCATTA +
Preference number: 4 (lower is better)
Translates to: RVMERRRMPRRPNRSTVTLALGG*SQPEAL
Trigger: TAATGCCTCTGGCTGGGAGCAGCCTCCCAATGCCAG...GGTCACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp AGGCCAGCCATAAAACAGGAAGAGGATGCAGGGAGCGGTGATCATTCGGCATCAGCGGGGCGAAGCCGCTaGACGAGGGGTCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: RPAIKQEEDAGSGDHSASAGRSR*TRGRYW
Trigger: CCAGTACCGACCCCTCGTGCAGCGGCTTCGCCCCGC...TGATGCCGAATGATCACCGCTCCCTGCATCCTCTTCCTGTTTTATGGCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474057.6
CDS-3UTR GCA 90 bp CACCAGCCCCAAGGTCAGCAGCACAATCCCGCGACGGCCAAATCTGTCTGCGGGACGGCCAAATCTGTCTaGGGGGTAACCCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: HQPQGQQHNPATAKSVCGTAKSV*GVTQEQ
Trigger: CTGTTCCTGGGTTACCCCGCAGACAGATTTGGCCGT...CCCGCAGACAGATTTGGCCGTCGCGGGATTGTGCTGCTGACCTTGGGGCTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR GCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCCCCCACCAACTCCCCTaGCAGGGCCACCCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPPHQLP*QGHPKP
Trigger: AGGCTTCGGGTGGCCCTGGCAGGGGAGTTGGTGGGG...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR GCA 90 bp AGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTGACCCCCAGGAAGACACAGCACTATCAGCCACCGTaGGGACTCCAGGAACAAACC +
Preference number: 4 (lower is better)
Translates to: RRMPRRPNRSTVTPRKTQHYQPP*GLQEQT
Trigger: GGTTTGTTCCTGGAGTCCGCACGGTGGCTGATAGTG...CTGTGTCTTCCTGGGGGTCACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGTCCTCCCCCAGCATCTaGCCATGGGGCCGGTTTCGC +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQSSPSI*PWGRFR
Trigger: GCGAAACCGGCCCCATGGGCAGATGCTGGGGGAGGA...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp TGGCAGCCTCGTTCAGATCTCTGTTGGGGTTCCCTTGTTGAGCCCACACTGTGGTCCTCCCCCAGCATCTaGCCATGGGGCCGGTTTCGC +
Preference number: 4 (lower is better)
Translates to: WQPRSDLCWGSLVEPTLWSSPSI*PWGRFR
Trigger: GCGAAACCGGCCCCATGGGCAGATGCTGGGGGAGGA...CCACAGTGTGGGCTCAACAAGGGAACCCCAACAGAGATCTGAACGAGGCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474774.1
CDS-3UTR GCA 90 bp GATGGCAGCCTCGTTCAGATAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATCCTCGGGCAGGAGCTTaGGCTTGGTCTCCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: DGSLVQIIPQAQQDQGSNPRAGA*AWSPAA
Trigger: TGCTGCCGGAGACCAAGCGCAAGCTCCTGCCCGAGG...ATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTATCTGAACGAGGCTGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGAAGAGATCCCGCTCTaGAGCTCTGCAGCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQEEIPL*SSAAAG
Trigger: GCCCGCGGCTGCAGAGCTGCAGAGCGGGATCTCTTC...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp TCTGTCTGCGGGGTAACCCAGGAACAGGTAGCCGGAGGCAAAGCCCAAGATGAAGAAGAGATCCCGCTCTaGAGCTCTGCAGCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: SVCGVTQEQVAGGKAQDEEEIPL*SSAAAG
Trigger: GCCCGCGGCTGCAGAGCTGCAGAGCGGGATCTCTTC...TTCATCTTGGGCTTTGCCTCCGGCTACCTGTTCCTGGGTTACCCCGCAGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR GCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCCAGTTGCGCGCCGGCTaGCCGGACACAGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPQLRAG*PDTDSS
Trigger: CGAGCTGTCTGTGTCCGGGCAGCCGGCGCGCAACTG...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAAAAGCTGAGGGGGCCTaGGGGCACGGCCAGCGACAG +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEKAEGA*GHGQRQ
Trigger: CTGTCGCTGGCCGTGCCCCCAGGCCCCCTCAGCTTT...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCACCGAAGCCTCTGGGTTaGGTCGCACAGCTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAPKPLG*VAQLQA
Trigger: CGCCTGGAGCTGTGCGACCCAACCCAGAGGCTTCGG...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR CCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGCCGAAGCCTCTGGGTTaGGTCGCACAGCTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQPKPLG*VAQLQA
Trigger: CGCCTGGAGCTGTGCGACCCAACCCAGAGGCTTCGG...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR CCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGCCACCCGAAGCCTCTaGGTTGGGTCGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQATRSL*VGSHSS
Trigger: GGAGCTGTGCGACCCAACCCAGAGGCTTCGGGTGGC...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR CCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCACCCAGCATCTGCCCATaGGGCCGGTTTCGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAPSICP*GRFRSA
Trigger: GGCTGAGCGAAACCGGCCCCATGGGCAGATGCTGGG...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp TCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGGTCATGGAGAGACAGGTAGAAGTCCGATaGGCTCCCTCCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SHRPSRTREAMPVRVMERQVEVR*APSSSH
Trigger: GTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTG...TCTCTCCATGACCCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGCAAGCAGCGGGACGTaGTCACAGCGGGTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQASSGT*SQRVGG
Trigger: ACCCCCTACCCGCTGTGACCACGTCCCGCTGCTTGC...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp CACAGACTGAGCCTCCTCAATCTGCCGCTTCACTATCAGCCACCGTGCGGACTCGCTCTCCGCGATGGCTaGCGTGAGGTGCCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: HRLSLLNLPLHYQPPCGLALRDG*REVPLR
Trigger: TCTCAGAGGCACCTCACGCCAGCCATCGCGGAGAGC...GAGTCCGCACGGTGGCTGATAGTGAAGCGGCAGATTGAGGAGGCTCAGTCTGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp AGCCTCGTTCAGATAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTGCTCTCCGCGATGGCTaGCGTGAGGTGCCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: SLVQIIPQAQQDQGSNAGALRDG*REVPLR
Trigger: TCTCAGAGGCACCTCACGCCAGCCATCGCGGAGAGC...ACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTATCTGAACGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAAGGGAGGAGGCAGGGTaGGGACGGCCCTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEREEAG*GRPSEL
Trigger: GAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTCCCT...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp GTTCAGATAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGGTGGATGCGCTGTCCTCTaGCTCAGTTGCGCGCCGGCT +
Preference number: 4 (lower is better)
Translates to: VQIIPQAQQDQGSNAGKGGCAVL*LSCAPA
Trigger: AGCCGGCGCGCAACTGAGCCAGAGGACAGCGCATCC...ACCCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTATCTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp GTCACACACCAGATCCCACTGGCCGATGGCGTTGGTGGTGAGCACAGGAAGGCCCGATGGCGTTGGTGGTaGGCACAGGAAGGCCATTAT +
Preference number: 4 (lower is better)
Translates to: VTHQIPLADGVGGEHRKARWRWW*AQEGHY
Trigger: ATAATGGCCTTCCTGTGCTCACCACCAACGCCATCG...GGCCTTCCTGTGCTCACCACCAACGCCATCGGCCAGTGGGATCTGGTGTGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR TCA 90 bp CCACCAGCCCCAAGGTCAGCAGCACAATCCCGCGACGGCCAAATCTGTCTGCGGAGGCAAAGCCCAAGATaGAGAGGATCTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PPAPRSAAQSRDGQICLRRQSPR*RGSAPG
Trigger: TCCTGGAGCAGATCCTCTTCATCTTGGGCTTTGCCT...CCGCAGACAGATTTGGCCGTCGCGGGATTGTGCTGCTGACCTTGGGGCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR TCA 90 bp GGATGCTCACAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGTTGGGGTTCCCTTGTTaGGCCCACACTGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GCSQSHRPSRTREAMPVRLGFPC*AHTVGK
Trigger: CTTCCCCACAGTGTGGGCTCAACAAGGGAACCCCAA...CCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTGTGAGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474774.1
CDS-3UTR TCA 90 bp GGCCAGCAGAGAGCACAGGTAGAAGTCCGATGGGCTCCCTCCTCCTCCCACAGGGGACAGAGAAAGTGGTaGTGGCAGCCTCGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GQQRAQVEVRWAPSSSHRGQRKW*WQPRSD
Trigger: ATCTGAACGAGGCTGCCATCACCACTTTCTCTGTCC...CCTGTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTGTGCTCTCTGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCCAGCAAGGAGGGTGCTaGGGATGGCGGCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPQQGGC*GWRQLG
Trigger: CCCAAGCTGCCGCCATCCTCAGCACCCTCCTTGCTG...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGACAGTGGTGGGGATaGCCTCAGCAGCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAGQWWG*PQQQGG
Trigger: CCCTCCTTGCTGCTGAGGTCATCCCCACCACTGTCC...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCACCGCGATGGCTGGCGTaGGGTGCCTCTGAGACTTCT +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAPRWLA*GASETS
Trigger: AGAAGTCTCAGAGGCACCTCACGCCAGCCATCGCGG...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAACGCTCACCCTGCAGCTaGTCCGTGGGCACCGCATCT +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSERSPCS*SVGTAS
Trigger: AGATGCGGTGCCCACGGAGCAGCTGCAGGGTGAGCG...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp TCAATCTGCCGCTTCACTATCAGCCACCGTGCGGACTCCAGGAACAAACCAGGCCCCAGGAACAGGAAGTaGCCTCCCACCCCCACCAAC +
Preference number: 4 (lower is better)
Translates to: SICRFTISHRADSRNKPGPRNRK*PPTPTN
Trigger: GTTGGTGGGGGTGGGAGGGCACTTCCTGTTCCTGGG...GCCTGGTTTGTTCCTGGAGTCCGCACGGTGGCTGATAGTGAAGCGGCAGATTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397260.7
CDS-3UTR GCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCTCCTCCCCCAGCATCTaGCCATGGGGCCGGTTTCGC +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPSSPSI*PWGRFR
Trigger: GCGAAACCGGCCCCATGGGCAGATGCTGGGGGAGGA...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGTATTCTCCAGGTCCTaGAGGGCCTCCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAVFSRS*RASWAS
Trigger: GGAGGCCCAGGAGGCCCTGCAGGACCTGGAGAATAC...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR GCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAGCCGCCAGCACCACGTaGTGCAGGAAGGCTCCATGG +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEAASTT*CRKAPW
Trigger: CCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGC...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAACCTCGGGCAGGAGCTTaGGCTTGGTCTCCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEPRAGA*AWSPAA
Trigger: TGCTGCCGGAGACCAAGCGCAAGCTCCTGCCCGAGG...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GGCCAGCAGAGAGCACAGGTAGAAGTCCGATGGGCTCCCTCCTCCTCCCACAGGTCTTCCCGATCTTCTTaGCACCTTTCTGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GQQRAQVEVRWAPSSSHRSSRSS*HLSVWA
Trigger: GGCCCACACAGAAAGGTGGCAAGAAGATCGGGAAGA...CCTGTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTGTGCTCTCTGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp GATGGCAGCCTCGTTCAGATAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATCCCGCGCCGAAAGGATaGGCTGTCCTCTGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: DGSLVQIIPQAQQDQGSNPAPKG*AVLWLS
Trigger: ACTGAGCCAGAGGACAGCGCATCCTTTCGGCGCGGG...ATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTATCTGAACGAGGCTGCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp TGGCAGCCTCGTTCAGATCTCTGTTGGGGTTCCCTTGTTGAGCCCACACTGTGGATGGGCAATGAAGCCTaGAGGGCCTCCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WQPRSDLCWGSLVEPTLWMGNEA*RASWAS
Trigger: GGAGGCCCAGGAGGCCCTGCAGGCTTCATTGCCCAT...CCACAGTGTGGGCTCAACAAGGGAACCCCAACAGAGATCTGAACGAGGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474774.1
CDS-3UTR CCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAGCCACCCGAAGCCTCTaGGTTGGGTCGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEATRSL*VGSHSS
Trigger: GGAGCTGTGCGACCCAACCCAGAGGCTTCGGGTGGC...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR CCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAGCAAGCAGCGGGACGTaGTCACAGCGGGTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEASSGT*SQRVGG
Trigger: ACCCCCTACCCGCTGTGACCACGTCCCGCTGCTTGC...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCCTCAGAGGGCAGGGTTaGGGGTGGCAAGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPLRGQG*GWQAAG
Trigger: TCCCGCTGCTTGCCACCCCCAACCCTGCCCTCTGAG...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAACTCAGAGGGCAGGGTTaGGGGTGGCAAGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSELRGQG*GWQAAG
Trigger: TCCCGCTGCTTGCCACCCCCAACCCTGCCCTCTGAG...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp TCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGGTCATGGAGAGATCTTTGGGCGCAGGATaGAGCCCAGACCCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: SHRPSRTREAMPVRVMERSLGAG*SPDPVV
Trigger: AACCACTGGGTCTGGGCTCCATCCTGCGCCCAAAGA...TCTCTCCATGACCCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp GGTAAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTTCTTTGGGCGCAGGATaGAGCCCAGACCCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: GKGHGEKKDAPAAKSVHGSLGAG*SPDPVV
Trigger: AACCACTGGGTCTGGGCTCCATCCTGCGCCCAAAGA...ACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAGGATGCGCTGTCCTCTaGCTCAGTTGCGCGCCGGCT +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEGCAVL*LSCAPA
Trigger: AGCCGGCGCGCAACTGAGCCAGAGGACAGCGCATCC...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp GAAGCCCAGGATAAGCAGATTTTTCCAGATGTTGCGGTAGTTGAGGAGGGAAGCCAGCGCTGGCGACGCTaGCGCCGCTGGCATTGGGAG +
Preference number: 4 (lower is better)
Translates to: EAQDKQIFPDVAVVEEGSQRWRR*RRWHWE
Trigger: CTCCCAATGCCAGCGGCGTCAGCGTCGCCAGCGCTG...GCTTCCCTCCTCAACTACCGCAACATCTGGAAAAATCTGCTTATCCTGGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397260.7
CDS-3UTR TCA 90 bp ACCTCGGGCAGGAGCTTGCGCTTGGTCTCCGGCAGCAGCATAATGCTGAGAATGATCCTCAGCACAGACTaGGCCTCCTCAATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: TSGRSLRLVSGSSIMLRMILSTD*ASSICR
Trigger: GCGGCAGATTGAGGAGGCTCAGTCTGTGCTGAGGAT...CATTCTCAGCATTATGCTGCTGCCGGAGACCAAGCGCAAGCTCCTGCCCGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGCAAATCGGTCCACGGTaGCCCCCAGGAAGACACAGG +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQQIGPR*PPGRHR
Trigger: CCTGTGTCTTCCTGGGGGTCACCGTGGACCGATTTG...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAGGACAGTGGTGGGGATaGCCTCAGCAGCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEGQWWG*PQQQGG
Trigger: CCCTCCTTGCTGCTGAGGTCATCCCCACCACTGTCC...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp CAAACCAGGCCAGCCATAAAACAGGAAGAGGATGCAGGGAGCGGTGATCATTCGGGCGTGAGGTGCCTCTaGGACTTCTGGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: QTRPAIKQEEDAGSGDHSGVRCL*DFWAAL
Trigger: CAGGGCTGCCCAGAAGTCTCAGAGGCACCTCACGCC...CGAATGATCACCGCTCCCTGCATCCTCTTCCTGTTTTATGGCTGGCCTGGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp AAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTGACCTCTGGCCAAGGAAGTaGATGCAAAGCAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KGHGEKKDAPAAKSVHGDLWPRK*MQSSRE
Trigger: CTCCCTGCTGCTTTGCATTCACTTCCTTGGCCAGAG...GTCACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp TCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGGTCATGGAGAGACGTTGGAGGTGGGGGTaGTCTCTACAGTGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: SHRPSRTREAMPVRVMERRWRWG*SLQCCR
Trigger: TCGACAACACTGTAGAGATCACCCCCACCTCCAACG...TCTCTCCATGACCCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp ATAGGATGCTCACAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAGAATGGCATGGGCAATaGAGCCTGCAGGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: IGCSQSHRPSRTREAMPVEWHGQ*SLQGLL
Trigger: CAGGAGGCCCTGCAGGCTTCATTGCCCATGCCATTC...TACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTGTGAGCATCCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474774.1
CDS-3UTR GCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCTGGGGTCCGAGGCCATaGCCAGAGCCACGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPWGPRP*PEPRRA
Trigger: TGCTCTTCGTGGCTCTGGGCATGGCCTCGGACCCCA...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GAAGCCCAGGATAAGCAGATTTTTCCAGATGTTGCGGTAGTTGAGGAGGGAAGCGCGGGGCGAAGCCGCTaGACGAGGGGTCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: EAQDKQIFPDVAVVEEGSAGRSR*TRGRYW
Trigger: CCAGTACCGACCCCTCGTGCAGCGGCTTCGCCCCGC...GCTTCCCTCCTCAACTACCGCAACATCTGGAAAAATCTGCTTATCCTGGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397260.7
CDS-3UTR GCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAGTATTCTCCAGGTCCTaGAGGGCCTCCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEVFSRS*RASWAS
Trigger: GGAGGCCCAGGAGGCCCTGCAGGACCTGGAGAATAC...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR GCA 90 bp GGATGCTCACAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGGTGGGGAAGATAGGATaGTCACAATCCCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: GCSQSHRPSRTREAMPVRVGKIG*SQSHRP
Trigger: GGGCCTGTGGGATTGTGAGCATCCTATCTTCCCCAC...CCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTGTGAGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474774.1
CDS-3UTR GCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGCAGTGTTGTCGATTTTaGCGCCGCCCCCGCCATTGG +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQQCCRF*RRPRHW
Trigger: CCAATGGCGGGGGCGGCGGCAAAATCGACAACACTG...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp CAAATCTGTCTGCGGGGTAACCCAGGAACAGGTAGCCGGAGGCAAAGCCCAAGACACACCAGATCCCACTaGCCGATGGCGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QICLRGNPGTGSRRQSPRHTRSH*PMALVV
Trigger: CACCACCAACGCCATCGGCCAGTGGGATCTGGTGTG...TCTTGGGCTTTGCCTCCGGCTACCTGTTCCTGGGTTACCCCGCAGACAGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR CCA 90 bp TGGCAGCCTCGTTCAGATCTCTGTTGGGGTTCCCTTGTTGAGCCCACACTGTGGCAGGTAGAAGTCCGATaGGCTCCCTCCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: WQPRSDLCWGSLVEPTLWQVEVR*APSSSH
Trigger: GTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTG...CCACAGTGTGGGCTCAACAAGGGAACCCCAACAGAGATCTGAACGAGGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474774.1
CDS-3UTR CCA 90 bp CAAACCAGGCCAGCCATAAAACAGGAAGAGGATGCAGGGAGCGGTGATCATTCGCTCAGAGGGCAGGGTTaGGGGTGGCAAGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: QTRPAIKQEEDAGSGDHSLRGQG*GWQAAG
Trigger: TCCCGCTGCTTGCCACCCCCAACCCTGCCCTCTGAG...CGAATGATCACCGCTCCCTGCATCCTCTTCCTGTTTTATGGCTGGCCTGGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCGCTCTCCGCGATGGCTaGCGTGAGGTGCCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPALRDG*REVPLR
Trigger: TCTCAGAGGCACCTCACGCCAGCCATCGCGGAGAGC...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp GGATGCTCACAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGGGACAGAGAAAGTGGTaGTGGCAGCCTCGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GCSQSHRPSRTREAMPVRGQRKW*WQPRSD
Trigger: ATCTGAACGAGGCTGCCATCACCACTTTCTCTGTCC...CCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTGTGAGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474774.1
CDS-3UTR TCA 90 bp CAAACCAGGCCAGCCATAAAACAGGAAGAGGATGCAGGGAGCGGTGATCATTCGGGACAGTGGTGGGGATaGCCTCAGCAGCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: QTRPAIKQEEDAGSGDHSGQWWG*PQQQGG
Trigger: CCCTCCTTGCTGCTGAGGTCATCCCCACCACTGTCC...CGAATGATCACCGCTCCCTGCATCCTCTTCCTGTTTTATGGCTGGCCTGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp CAAACCAGGCCAGCCATAAAACAGGAAGAGGATGCAGGGAGCGGTGATCATTCGCCGCGATGGCTGGCGTaGGGTGCCTCTGAGACTTCT +
Preference number: 4 (lower is better)
Translates to: QTRPAIKQEEDAGSGDHSPRWLA*GASETS
Trigger: AGAAGTCTCAGAGGCACCTCACGCCAGCCATCGCGG...CGAATGATCACCGCTCCCTGCATCCTCTTCCTGTTTTATGGCTGGCCTGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR GCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCATGGAGAGAAGAAGGATaGCCCGGCGGCCAAATCGGT +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAWREEG*PGGQIG
Trigger: ACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCA...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGTGGAGAGAAGAAGGATaGCCCGGCGGCCAAATCGGT +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQWREEG*PGGQIG
Trigger: ACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCA...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp AAGATAGGATGCTCACAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGTGGAGAGAAGAAGGATaGCCCGGCGGCCAAATCGGT +
Preference number: 4 (lower is better)
Translates to: KIGCSQSHRPSRTREAMPWREEG*PGGQIG
Trigger: ACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCA...CGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTGTGAGCATCCTATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474774.1
CDS-3UTR GCA 90 bp CAGAGAGCACAGGTAGAAGTCCGATGGGCTCCCTCCTCCTCCCACAGGCTGGTATCTTCCCGATCTTCTTaGCACCTTTCTGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: QRAQVEVRWAPSSSHRLVSSRSS*HLSVWA
Trigger: GGCCCACACAGAAAGGTGGCAAGAAGATCGGGAAGA...TACCAGCCTGTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTGTGCTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCCACACCAGATCCCACTaGCCGATGGCGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPHTRSH*PMALVV
Trigger: CACCACCAACGCCATCGGCCAGTGGGATCTGGTGTG...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354772.9
ENST00000397267.5
CDS-3UTR CCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAACAGGTAGAAGTCCGATaGGCTCCCTCCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEQVEVR*APSSSH
Trigger: GTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTG...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCAGGATGGCGGCAGCTTaGGAGGAGAAGAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPRMAAA*EEKSPR
Trigger: CCTTGGGCTCTTCTCCTCCCAAGCTGCCGCCATCCT...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGAGCCCAGACCCAGTaGTTACAGTGTGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAGAQTQ*LQCGAL
Trigger: GAGAGCTCCACACTGTAACCACTGGGTCTGGGCTCC...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp AATCTGCCGCTTCACTATCAGCCACCGTGCGGACTCCAGGAACAAACCAGGCCAGGAGCCCAGACCCAGTaGTTACAGTGTGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: NLPLHYQPPCGLQEQTRPGAQTQ*LQCGAL
Trigger: GAGAGCTCCACACTGTAACCACTGGGTCTGGGCTCC...TGGCCTGGTTTGTTCCTGGAGTCCGCACGGTGGCTGATAGTGAAGCGGCAGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCACGATGGCGTTGGTGGTaGGCACAGGAAGGCCATTAT +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAARWRWW*AQEGHY
Trigger: ATAATGGCCTTCCTGTGCTCACCACCAACGCCATCG...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGGATGCAGGGAGCGGTaGTCATTCGCTGTAGGAATC +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQGCRER*SFAVGI
Trigger: GATTCCTACAGCGAATGATCACCGCTCCCTGCATCC...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR TCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCATCCTCAGCACAGACTaGGCCTCCTCAATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPILSTD*ASSICR
Trigger: GCGGCAGATTGAGGAGGCTCAGTCTGTGCTGAGGAT...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAATCCTCAGCACAGACTaGGCCTCCTCAATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEILSTD*ASSICR
Trigger: GCGGCAGATTGAGGAGGCTCAGTCTGTGCTGAGGAT...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATTGGGGTTCCCTTGTTaGGCCCACACTGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSELGFPC*AHTVGK
Trigger: CTTCCCCACAGTGTGGGCTCAACAAGGGAACCCCAA...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397267.5
CDS-3UTR TCA 90 bp GAAGCCCAGGATAAGCAGATTTTTCCAGATGTTGCGGTAGTTGAGGAGGGAAGCGGCGTGAGGTGCCTCTaGGACTTCTGGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: EAQDKQIFPDVAVVEEGSGVRCL*DFWAAL
Trigger: CAGGGCTGCCCAGAAGTCTCAGAGGCACCTCACGCC...GCTTCCCTCCTCAACTACCGCAACATCTGGAAAAATCTGCTTATCCTGGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397260.7
CDS-3UTR TCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGCTCTGGCCAAGGAAGTaGATGCAAAGCAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQLWPRK*MQSSRE
Trigger: CTCCCTGCTGCTTTGCATTCACTTCCTTGGCCAGAG...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCACGTTGGAGGTGGGGGTaGTCTCTACAGTGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAARWRWG*SLQCCR
Trigger: TCGACAACACTGTAGAGATCACCCCCACCTCCAACG...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCCTGGCATTGGGAGGCTaGTCCCAGCCAGAGGCATTA +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPLALGG*SQPEAL
Trigger: TAATGCCTCTGGCTGGGAGCAGCCTCCCAATGCCAG...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGCACTATCAGCCACCGTaGGGACTCCAGGAACAAACC +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQHYQPP*GLQEQT
Trigger: GGTTTGTTCCTGGAGTCCGCACGGTGGCTGATAGTG...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCTGGAGAGAAGAAGGATaGCCCGGCGGCCAAATCGGT +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPWREEG*PGGQIG
Trigger: ACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCA...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR GCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGTGGGGAAGATAGGATaGTCACAATCCCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQVGKIG*SQSHRP
Trigger: GGGCCTGTGGGATTGTGAGCATCCTATCTTCCCCAC...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397267.5
CDS-3UTR GCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGGCCAAGGAAGTGAATaGAAAGCAGCAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQGQGSE*KAAGRR
Trigger: CCTCCTCCCTGCTGCTTTGCATTCACTTCCTTGGCC...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp AGCCTCGTTCAGATCTCTGTTGGGGTTCCCTTGTTGAGCCCACACTGTGGGGAACAGTGGCGAATGGCATaGGCAATGAAGCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SLVQISVGVPLLSPHCGEQWRMA*AMKPAG
Trigger: CCCTGCAGGCTTCATTGCCCATGCCATTCGCCACTG...TTCCCCACAGTGTGGGCTCAACAAGGGAACCCCAACAGAGATCTGAACGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474774.1
CDS-3UTR TCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCCGATGGCGTTGGTGGTaGGCACAGGAAGGCCATTAT +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPRWRWW*AQEGHY
Trigger: ATAATGGCCTTCCTGTGCTCACCACCAACGCCATCG...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGAGGCAAAGCCCAAGATaGAGAGGATCTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQRQSPR*RGSAPG
Trigger: TCCTGGAGCAGATCCTCTTCATCTTGGGCTTTGCCT...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354772.9
ENST00000397267.5
CDS-3UTR TCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAGGATGCAGGGAGCGGTaGTCATTCGCTGTAGGAATC +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEGCRER*SFAVGI
Trigger: GATTCCTACAGCGAATGATCACCGCTCCCTGCATCC...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR TCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGACAGAGAAAGTGGTaGTGGCAGCCTCGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAGQRKW*WQPRSD
Trigger: ATCTGAACGAGGCTGCCATCACCACTTTCTCTGTCC...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp AATCTGCCGCTTCACTATCAGCCACCGTGCGGACTCCAGGAACAAACCAGGCCAGGACAGAGAAAGTGGTaGTGGCAGCCTCGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: NLPLHYQPPCGLQEQTRPGQRKW*WQPRSD
Trigger: ATCTGAACGAGGCTGCCATCACCACTTTCTCTGTCC...TGGCCTGGTTTGTTCCTGGAGTCCGCACGGTGGCTGATAGTGAAGCGGCAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR TCA 90 bp AAATCTGTCTGCGGGGTAACCCAGGAACAGGTAGCCGGAGGCAAAGCCCAAGATCGTTGGAGGTGGGGGTaGTCTCTACAGTGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: KSVCGVTQEQVAGGKAQDRWRWG*SLQCCR
Trigger: TCGACAACACTGTAGAGATCACCCCCACCTCCAACG...ATCTTGGGCTTTGCCTCCGGCTACCTGTTCCTGGGTTACCCCGCAGACAGATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR GCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCACGGCCAAATCTGTCTaGGGGGTAACCCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPTAKSV*GVTQEQ
Trigger: CTGTTCCTGGGTTACCCCGCAGACAGATTTGGCCGT...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354772.9
ENST00000397267.5
CDS-3UTR GCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCATCTTCCCGATCTTCTTaGCACCTTTCTGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAASSRSS*HLSVWA
Trigger: GGCCCACACAGAAAGGTGGCAAGAAGATCGGGAAGA...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CCA 90 bp AAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTGACAGAAATAATGAGGTCTaGGTGGATGTCTTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: KGHGEKKDAPAAKSVHGDRNNEV*VDVFGR
Trigger: GCGCCCAAAGACATCCACCCAGACCTCATTATTTCT...GTCACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp AGCACAGGTAGAAGTCCGATGGGCTCCCTCCTCCTCCCACAGGCTGGTAGCAGTAGAAATAATGAGGTCTaGGTGGATGTCTTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: STGRSPMGSLLLPQAGSSRNNEV*VDVFGR
Trigger: GCGCCCAAAGACATCCACCCAGACCTCATTATTTCT...ACTGCTACCAGCCTGTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
3UTR CAA 72 bp GGCAGCCTCGTTCAGATCTCTGTTGGGGTTCCCTTGTaGAGCCCACACTGTGGGGAAGATAGGATGCTCACA +
Preference number: 4 (lower is better)
Translates to: GSLVQISVGVPL*SPHCGEDRMLT
Trigger: TGTGAGCATCCTATCTTCCCCACAGTGTGGGCTCAACAAGGGAACCCCAACAGAGATCTGAACGAGGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474774.1
3UTR CAA 72 bp GATGGCAGCCTCGTTCAGATCTCTGTTGGGGTTCCCTaGTTGAGCCCACACTGTGGGGAAGATAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: DGSLVQISVGVP*LSPHCGEDRML
Trigger: GAGCATCCTATCTTCCCCACAGTGTGGGCTCAACAAGGGAACCCCAACAGAGATCTGAACGAGGCTGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474774.1
CDS-3UTR TCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCAGGCAAAGCCCAAGATaGAGAGGATCTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPRQSPR*RGSAPG
Trigger: TCCTGGAGCAGATCCTCTTCATCTTGGGCTTTGCCT...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354772.9
ENST00000397267.5
CDS-3UTR TCA 90 bp AGGCCAGCCATAAAACAGGAAGAGGATGCAGGGAGCGGTGATCATTCGGCATCACTCTGGCCAAGGAAGTaGATGCAAAGCAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RPAIKQEEDAGSGDHSASLWPRK*MQSSRE
Trigger: CTCCCTGCTGCTTTGCATTCACTTCCTTGGCCAGAG...TGATGCCGAATGATCACCGCTCCCTGCATCCTCTTCCTGTTTTATGGCTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474057.6
CDS-3UTR CCA 90 bp AGCCTCGTTCAGATCTCTGTTGGGGTTCCCTTGTTGAGCCCACACTGTGGGGAACGTTCAGATCTCTGTTaGGGTTCCCTTGTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: SLVQISVGVPLLSPHCGERSDLC*GSLVEP
Trigger: GGGCTCAACAAGGGAACCCCAACAGAGATCTGAACG...TTCCCCACAGTGTGGGCTCAACAAGGGAACCCCAACAGAGATCTGAACGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474774.1
CDS-3UTR CCA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAATAATGAGGTCTGGGTaGATGTCTTTGGGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: GALSLSPDSGQGSECKAAIMRSG*MSLGAG
Trigger: TCCTGCGCCCAAAGACATCCACCCAGACCTCATTAT...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR TCA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGAGATGTTGCGGTAGTTaGGGAGGGAAGCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQRCCGS*GGKQRK
Trigger: TTTCCTTTGCTTCCCTCCTCAACTACCGCAACATCT...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR TCA 90 bp TCAATCTGCCGCTTCACTATCAGCCACCGTGCGGACTCCAGGAACAAACCAGGCAGATGTTGCGGTAGTTaGGGAGGGAAGCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: SICRFTISHRADSRNKPGRCCGS*GGKQRK
Trigger: TTTCCTTTGCTTCCCTCCTCAACTACCGCAACATCT...GCCTGGTTTGTTCCTGGAGTCCGCACGGTGGCTGATAGTGAAGCGGCAGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397260.7
CDS-3UTR GCA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAAAGATGAAGAGGATCTaGTCCAGGATCACCTGCCAG +
Preference number: 4 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEKMKRI*SRITCQ
Trigger: CTGGCAGGTGATCCTGGAGCAGATCCTCTTCATCTT...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354772.9
ENST00000397267.5
CDS-3UTR TCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCAGATGTTGCGGTAGTTaGGGAGGGAAGCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPRCCGS*GGKQRK
Trigger: TTTCCTTTGCTTCCCTCCTCAACTACCGCAACATCT...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR CCA 90 bp CAAACCAGGCCAGCCATAAAACAGGAAGAGGATGCAGGGAGCGGTGATCATTCGATAATGAGGTCTGGGTaGATGTCTTTGGGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: QTRPAIKQEEDAGSGDHSIMRSG*MSLGAG
Trigger: TCCTGCGCCCAAAGACATCCACCCAGACCTCATTAT...CGAATGATCACCGCTCCCTGCATCCTCTTCCTGTTTTATGGCTGGCCTGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CCA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCAGAAATAATGAGGTCTaGGTGGATGTCTTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPRNNEV*VDVFGR
Trigger: GCGCCCAAAGACATCCACCCAGACCTCATTATTTCT...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS TCA 90 bp CGACACGGCTGGCGGCGCTGGCTGCTAGGGCAGCGCTGGCGACGCTaGCGCCGCTGGCATTGGGAGGCCTGCAGCTGCTCCGTGGGCACC +
Preference number: 5 (lower is better)
Translates to: RHGWRRWLLGQRWRR*RRWHWEACSCSVGT
Trigger: GGTGCCCACGGAGCAGCTGCAGGCCTCCCAATGCCAGCGGCGTCAGCGTCGCCAGCGCTGCCCTAGCAGCCAGCGCCGCCAGCCGTGTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS GCA 90 bp AGAGCCACGAAGAGCACCGGCAGGCAGCAGAGGCCGAGCTGCAGCTaGTGGCCGCCGCCCAGCGCCCCCACCTGGGCGAGCAGCGCCTCA +
Preference number: 5 (lower is better)
Translates to: RATKSTGRQQRPSCS*WPPPSAPTWASSAS
Trigger: TGAGGCGCTGCTCGCCCAGGTGGGGGCGCTGGGCGGCGGCCAGCAGCTGCAGCTCGGCCTCTGCTGCCTGCCGGTGCTCTTCGTGGCTCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000206544.8
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
ENST00000557699.5
CDS GCA 90 bp CCAGCTTGCCGACCGCAGGGGCCCTGCCGGCCCGCGCCGAAAGGATaGGCTGTCCTCTGGCTCAGTTGCGCGCCGGCTGCCCGGACACAG +
Preference number: 5 (lower is better)
Translates to: PACRPQGPCRPAPKG*AVLWLSCAPAARTQ
Trigger: CTGTGTCCGGGCAGCCGGCGCGCAACTGAGCCAGAGGACAGCGCATCCTTTCGGCGCGGGCCGGCAGGGCCCCTGCGGTCGGCAAGCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
ENST00000636431.2
CDS GCA 90 bp TCCCGGTGGCCACCCGGGGAGCCAGCTTGCCGACCGCAGGGGCCCTaGCGGCCCGCGCCGAAAGGATGCGCTGTCCTCTGGCTCAGTTGC +
Preference number: 5 (lower is better)
Translates to: SRWPPGEPACRPQGP*RPAPKGCAVLWLSC
Trigger: GCAACTGAGCCAGAGGACAGCGCATCCTTTCGGCGCGGGCCGGCAGGGCCCCTGCGGTCGGCAAGCTGGCTCCCCGGGTGGCCACCGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
ENST00000636431.2
CDS-3UTR CAA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCACCCGGGGAGCCAGCTaGCCGACCGCAGGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCTRGAS*PTAGAL
Trigger: CAGGGCCCCTGCGGTCGGCAAGCTGGCTCCCCGGGT...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS GCA 90 bp GCGTCTCCCTCCCCCTCCCGCTCGCGCTCCCGCTCACCCTGCAGCTaGTCCGTGGGCACCGCATCTCCGAGGGTCCCGACCTGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: ASPSPSRSRSRSPCS*SVGTASPRVPTCCW
Trigger: CCAACAGCAGGTCGGGACCCTCGGAGATGCGGTGCCCACGGAGCAGCTGCAGGGTGAGCGGGAGCGCGAGCGGGAGGGGGAGGGAGACGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206544.8
ENST00000557699.5
CDS GCA 90 bp GCGTCTCCCTCCCCCTCCCGCTCGCGCTCCCGCTCACCCTGCAGCTaGTCCGTGGGCACCGCATCTCCGAGGGTCCCGACCTGTCCGTTG +
Preference number: 5 (lower is better)
Translates to: ASPSPSRSRSRSPCS*SVGTASPRVPTCPL
Trigger: CAACGGACAGGTCGGGACCCTCGGAGATGCGGTGCCCACGGAGCAGCTGCAGGGTGAGCGGGAGCGCGAGCGGGAGGGGGAGGGAGACGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CAA 90 bp CAGCGGGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCGACCTCGGGCAGGAGCTaGCGCTTGGTCTCCGGCAGC +
Preference number: 5 (lower is better)
Translates to: QRVGGGCRSREGRRHSSPTSGRS*RLVSGS
Trigger: GCTGCCGGAGACCAAGCGCAAGCTCCTGCCCGAGGT...CGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS CCA 90 bp CCGCAGGGGCCCTGCCGGCCCGCGCCGAAAGGATGCGCTGTCCTCTaGCTCAGTTGCGCGCCGGCTGCCCGGACACAGACAGCTCGAAGA +
Preference number: 5 (lower is better)
Translates to: PQGPCRPAPKGCAVL*LSCAPAARTQTARR
Trigger: TCTTCGAGCTGTCTGTGTCCGGGCAGCCGGCGCGCAACTGAGCCAGAGGACAGCGCATCCTTTCGGCGCGGGCCGGCAGGGCCCCTGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
ENST00000636431.2
CDS-3UTR CAA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGCCCGAAGCCTCTGGGTaGGGTCGCACAGCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRPEASG*GRTAPG
Trigger: GCCTGGAGCTGTGCGACCCAACCCAGAGGCTTCGGG...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR CAA 90 bp CAGCGGGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCGGTCCCGACCTGTCCGTaGGAGGTGGGGGTGATCTCT +
Preference number: 5 (lower is better)
Translates to: QRVGGGCRSREGRRHSSPVPTCP*EVGVIS
Trigger: AGAGATCACCCCCACCTCCAACGGACAGGTCGGGAC...CGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CAA 90 bp CCCGCGACGGCCAAATCTGTCTGCGGGGTAACCCAGGAACAGGTAGCCGGAGGCACCCGGGGAGCCAGCTaGCCGACCGCAGGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: PATAKSVCGVTQEQVAGGTRGAS*PTAGAL
Trigger: CAGGGCCCCTGCGGTCGGCAAGCTGGCTCCCCGGGT...GCCTCCGGCTACCTGTTCCTGGGTTACCCCGCAGACAGATTTGGCCGTCGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS GCA 90 bp CCCTGCCGGCCCGCGCCGAAAGGATGCGCTGTCCTCTGGCTCAGTTaGGCGCCGGCTGCCCGGACACAGACAGCTCGAAGAGATCCCGCT +
Preference number: 5 (lower is better)
Translates to: PCRPAPKGCAVLWLS*APAARTQTARRDPA
Trigger: AGCGGGATCTCTTCGAGCTGTCTGTGTCCGGGCAGCCGGCGCGCAACTGAGCCAGAGGACAGCGCATCCTTTCGGCGCGGGCCGGCAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
ENST00000636431.2
CDS-3UTR CAA 90 bp AGGAGGGCGCAGGCCGCCAGCACCACGTGCTGCAGGAAGGCTCCATGGCCCATGACCTCGGGCAGGAGCTaGCGCTTGGTCTCCGGCAGC +
Preference number: 5 (lower is better)
Translates to: RRAQAASTTCCRKAPWPMTSGRS*RLVSGS
Trigger: GCTGCCGGAGACCAAGCGCAAGCTCCTGCCCGAGGT...CATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTGGCGGCCTGCGCCCTCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS GCA 90 bp GCGCGCCGGCTGCCCGGACACAGACAGCTCGAAGAGATCCCGCTCTaGAGCTCTGCAGCCGCGGGCGCCTCCTTGGTCTCTGCGATCTCT +
Preference number: 5 (lower is better)
Translates to: ARRLPGHRQLEEIPL*SSAAAGASLVSAIS
Trigger: AGAGATCGCAGAGACCAAGGAGGCGCCCGCGGCTGCAGAGCTGCAGAGCGGGATCTCTTCGAGCTGTCTGTGTCCGGGCAGCCGGCGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CAA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCGAGGATGGCGGCAGCTaGGGAGGAGAAGAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCEDGGS*GGEEPK
Trigger: CTTGGGCTCTTCTCCTCCCAAGCTGCCGCCATCCTC...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CAA 90 bp CGTGCTGCAGGAAGGCTCCATGGCCCATGTGGAGGCGCTGGGCCGGGCCGCTCAGGCAGGAGCTTGCGCTaGGTCTCCGGCAGCAGCATA +
Preference number: 5 (lower is better)
Translates to: RAAGRLHGPCGGAGPGRSGRSLR*VSGSSI
Trigger: TATGCTGCTGCCGGAGACCAAGCGCAAGCTCCTGCC...TGAGCGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CAA 90 bp TACTCCACAGGGGCCCACCAGCCCCAAGGTCAGCAGCACAATCCCGCGACGGCCCTGACGCCGCTGGCATaGGGAGGCCTGCAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: YSTGAHQPQGQQHNPATALTPLA*GGLQLL
Trigger: GAGCAGCTGCAGGCCTCCCAATGCCAGCGGCGTCAG...GGCCGTCGCGGGATTGTGCTGCTGACCTTGGGGCTGGTGGGCCCCTGTGGAGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR CAA 90 bp AGGGTTGGGGGTGGCAAGCAGCGGGACGTGGTCACAGCGGGTAGGGGGTGGCTGGAGGATGGCGGCAGCTaGGGAGGAGAAGAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: RVGGGKQRDVVTAGRGWLEDGGS*GGEEPK
Trigger: CTTGGGCTCTTCTCCTCCCAAGCTGCCGCCATCCTC...CAGCCACCCCCTACCCGCTGTGACCACGTCCCGCTGCTTGCCACCCCCAACCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CAA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTCTGGGTGGATGTCTTaGGGCGCAGGATGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRSGWMS*GAGWSP
Trigger: TGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGA...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS GCA 90 bp GCTGCCCGGACACAGACAGCTCGAAGAGATCCCGCTCTGCAGCTCTaGAGCCGCGGGCGCCTCCTTGGTCTCTGCGATCTCTGCGCTGCT +
Preference number: 5 (lower is better)
Translates to: AARTQTARRDPALQL*SRGRLLGLCDLCAA
Trigger: AGCAGCGCAGAGATCGCAGAGACCAAGGAGGCGCCCGCGGCTGCAGAGCTGCAGAGCGGGATCTCTTCGAGCTGTCTGTGTCCGGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397267.5
ENST00000474057.6
CDS GCA 90 bp CGCGCCGAAAGGATGCGCTGTCCTCTGGCTCAGTTGCGCGCCGGCTaGCCGGACACAGACAGCTCGAAGAGATCCCGCTCTGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: RAERMRCPLAQLRAG*PDTDSSKRSRSAAL
Trigger: CAGAGCTGCAGAGCGGGATCTCTTCGAGCTGTCTGTGTCCGGGCAGCCGGCGCGCAACTGAGCCAGAGGACAGCGCATCCTTTCGGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
ENST00000636431.2
CDS-3UTR CAA 90 bp CAGCGGGTAGGGGGTGGCTGCCGCAGCAGGGAAGGCCGGCGACACAGCTCCCCGGCATGGGCAATGAAGTaGGTGAAGCCCAGGATAAGC +
Preference number: 5 (lower is better)
Translates to: QRVGGGCRSREGRRHSSPAWAMK*VKPRIS
Trigger: GCTTATCCTGGGCTTCACCAACTTCATTGCCCATGC...CGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAGCCACCCCCTACCCGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397260.7
CDS-3UTR CAA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCGTTGGGGTTCCCTTGTaGAGCCCACACTGTGGGGAA +
Preference number: 5 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCVGVPL*SPHCGE
Trigger: TTCCCCACAGTGTGGGCTCAACAAGGGAACCCCAAC...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397267.5
CDS-3UTR CAA 90 bp CAGCACCACGTGCTGCAGGAAGGCTCCATGGCCCATGTGGAGGCGCTGGGCCGGTCTGGGTGGATGTCTTaGGGCGCAGGATGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: QHHVLQEGSMAHVEALGRSGWMS*GAGWSP
Trigger: TGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGA...CCGGCCCAGCGCCTCCACATGGGCCATGGAGCCTTCCTGCAGCACGTGGTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CAA 90 bp GAAGGCCGGCGACACAGCTCCCCGTCCCGGAGCACCTCGGGCAGGAGCTTGCGCGTGATCTCTACAGTGTaGTCGATTTTGCCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: EGRRHSSPSRSTSGRSLRVISTV*SILPPP
Trigger: GGGCGGCGGCAAAATCGACAACACTGTAGAGATCAC...GCGCAAGCTCCTGCCCGAGGTGCTCCGGGACGGGGAGCTGTGTCGCCGGCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CAA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCGTCTTCCCGATCTTCTaGCCACCTTTCTGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCVFPIF*PPFCVG
Trigger: GCCCACACAGAAAGGTGGCAAGAAGATCGGGAAGAC...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CAA 90 bp GAGGAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGGTGATCTCTACAGTGTaGTCGATTTTGCCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: EEAGWGRPSELSAMAGVRVISTV*SILPPP
Trigger: GGGCGGCGGCAAAATCGACAACACTGTAGAGATCAC...CCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CAA 90 bp AATCTGCCGCTTCACTATCAGCCACCGTGCGGACTCCAGGAACAAACCAGGCCAACCCGGGGAGCCAGCTaGCCGACCGCAGGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: NLPLHYQPPCGLQEQTRPTRGAS*PTAGAL
Trigger: CAGGGCCCCTGCGGTCGGCAAGCTGGCTCCCCGGGT...TGGCCTGGTTTGTTCCTGGAGTCCGCACGGTGGCTGATAGTGAAGCGGCAGATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CAA 90 bp GTTCAGATAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGGTACCCGGGGAGCCAGCTaGCCGACCGCAGGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: VQIIPQAQQDQGSNAGKGTRGAS*PTAGAL
Trigger: CAGGGCCCCTGCGGTCGGCAAGCTGGCTCCCCGGGT...ACCCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTATCTGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CAA 90 bp TCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGGTCATGGAGAGACCCGAAGCCTCTGGGTaGGGTCGCACAGCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: SHRPSRTREAMPVRVMERPEASG*GRTAPG
Trigger: GCCTGGAGCTGTGCGACCCAACCCAGAGGCTTCGGG...TCTCTCCATGACCCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397260.7
CDS-3UTR CAA 90 bp GAGGCAGGGTGGGGACGGCCCTCTGAGCTCTCCGCGATGGCTGGCGTGAGGTGCGCATGGGCAATGAAGTaGGTGAAGCCCAGGATAAGC +
Preference number: 5 (lower is better)
Translates to: EAGWGRPSELSAMAGVRCAWAMK*VKPRIS
Trigger: GCTTATCCTGGGCTTCACCAACTTCATTGCCCATGC...GCACCTCACGCCAGCCATCGCGGAGAGCTCAGAGGGCCGTCCCCACCCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR CAA 90 bp ACCAGCCCCAAGGTCAGCAGCACAATCCCGCGACGGCCAAATCTGTCTGCGGGGGTCCCGACCTGTCCGTaGGAGGTGGGGGTGATCTCT +
Preference number: 5 (lower is better)
Translates to: TSPKVSSTIPRRPNLSAGVPTCP*EVGVIS
Trigger: AGAGATCACCCCCACCTCCAACGGACAGGTCGGGAC...CCCCGCAGACAGATTTGGCCGTCGCGGGATTGTGCTGCTGACCTTGGGGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR CAA 90 bp CCCTCCTACTCCACAGGGGCCCACCAGCCCCAAGGTCAGCAGCACAATCCCGCGGTGATCTCTACAGTGTaGTCGATTTTGCCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: PSYSTGAHQPQGQQHNPAVISTV*SILPPP
Trigger: GGGCGGCGGCAAAATCGACAACACTGTAGAGATCAC...CGCGGGATTGTGCTGCTGACCTTGGGGCTGGTGGGCCCCTGTGGAGTAGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR CAA 90 bp AGCACAGGTAGAAGTCCGATGGGCTCCCTCCTCCTCCCACAGGCTGGTAGCAGTGAGGATGGCGGCAGCTaGGGAGGAGAAGAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: STGRSPMGSLLLPQAGSSEDGGS*GGEEPK
Trigger: CTTGGGCTCTTCTCCTCCCAAGCTGCCGCCATCCTC...ACTGCTACCAGCCTGTGGGAGGAGGAGGGAGCCCATCGGACTTCTACCTGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CAA 90 bp GGTAGAAGTCCGATGGGCTCCCTCCTCCTCCCACAGGCTGGTAGCAGTGGCGAAACAGTGTTGTCGATTTaGCCGCCGCCCCCGCCATTG +
Preference number: 5 (lower is better)
Translates to: GRSPMGSLLLPQAGSSGETVLSI*PPPPPL
Trigger: CAATGGCGGGGGCGGCGGCAAAATCGACAACACTGT...TTCGCCACTGCTACCAGCCTGTGGGAGGAGGAGGGAGCCCATCGGACTTCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CAA 90 bp GTCACACACCAGATCCCACTGGCCGATGGCGTTGGTGGTGAGCACAGGAAGGCCACAGTGTTGTCGATTTaGCCGCCGCCCCCGCCATTG +
Preference number: 5 (lower is better)
Translates to: VTHQIPLADGVGGEHRKATVLSI*PPPPPL
Trigger: CAATGGCGGGGGCGGCGGCAAAATCGACAACACTGT...GGCCTTCCTGTGCTCACCACCAACGCCATCGGCCAGTGGGATCTGGTGTGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR CAA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCGCCGCGGGCGCCTCCTaGGTCTCTGCGATCTCTGCG +
Preference number: 5 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPAAGAS*VSAISA
Trigger: CGCAGAGATCGCAGAGACCAAGGAGGCGCCCGCGGC...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CAA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAGCCGCGGGCGCCTCCTaGGTCTCTGCGATCTCTGCG +
Preference number: 5 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEAAGAS*VSAISA
Trigger: CGCAGAGATCGCAGAGACCAAGGAGGCGCCCGCGGC...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397267.5
ENST00000474057.6
CDS CCA 90 bp TCTGGGTTGGGTCGCACAGCTCCAGGCCTGGAGATACAGCAGGGGTaGAGAGAGGAGAGGGAGGCCAGGGAGGAAGAAGGCATAAGAGAG +
Preference number: 5 (lower is better)
Translates to: SGLGRTAPGLEIQQG*REEREAREEEGIRE
Trigger: CTCTCTTATGCCTTCTTCCTCCCTGGCCTCCCTCTCCTCTCTCCACCCCTGCTGTATCTCCAGGCCTGGAGCTGTGCGACCCAACCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557699.5
CDS-3UTR CAA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAACCTCGGGCAGGAGCTaGCGCTTGGTCTCCGGCAGC +
Preference number: 5 (lower is better)
Translates to: WLQCGALSLSPDSGQGSETSGRS*RLVSGS
Trigger: GCTGCCGGAGACCAAGCGCAAGCTCCTGCCCGAGGT...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CAA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCACCTCGGGCAGGAGCTaGCGCTTGGTCTCCGGCAGC +
Preference number: 5 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPTSGRS*RLVSGS
Trigger: GCTGCCGGAGACCAAGCGCAAGCTCCTGCCCGAGGT...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CAA 90 bp GGTAAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTACAGTGTTGTCGATTTaGCCGCCGCCCCCGCCATTG +
Preference number: 5 (lower is better)
Translates to: GKGHGEKKDAPAAKSVHGTVLSI*PPPPPL
Trigger: CAATGGCGGGGGCGGCGGCAAAATCGACAACACTGT...ACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CAA 90 bp TCTGTCTGCGGGGTAACCCAGGAACAGGTAGCCGGAGGCAAAGCCCAAGATGAACACTGGCCGATGGCGTaGGTGGTGAGCACAGGAAGG +
Preference number: 5 (lower is better)
Translates to: SVCGVTQEQVAGGKAQDEHWPMA*VVSTGR
Trigger: CCTTCCTGTGCTCACCACCAACGCCATCGGCCAGTG...TTCATCTTGGGCTTTGCCTCCGGCTACCTGTTCCTGGGTTACCCCGCAGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS-3UTR CAA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGAGGATGGCGGCAGCTaGGGAGGAGAAGAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQEDGGS*GGEEPK
Trigger: CTTGGGCTCTTCTCCTCCCAAGCTGCCGCCATCCTC...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CAA 90 bp GTTCAGATAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAAGGGTGGCAGGAGCTTGCGCTaGGTCTCCGGCAGCAGCATA +
Preference number: 5 (lower is better)
Translates to: VQIIPQAQQDQGSNAGKGGRSLR*VSGSSI
Trigger: TATGCTGCTGCCGGAGACCAAGCGCAAGCTCCTGCC...ACCCTTACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTATCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CAA 90 bp GCCGGTAAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGTCTTCCCGATCTTCTaGCCACCTTTCTGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: AGKGHGEKKDAPAAKSVHVFPIF*PPFCVG
Trigger: GCCCACACAGAAAGGTGGCAAGAAGATCGGGAAGAC...GTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTTACCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CAA 90 bp GGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGTCCCGACCTGTCCGTaGGAGGTGGGGGTGATCTCT +
Preference number: 5 (lower is better)
Translates to: GALSLSPDSGQGSECKAAVPTCP*EVGVIS
Trigger: AGAGATCACCCCCACCTCCAACGGACAGGTCGGGAC...TGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS CCA 90 bp CTGGCGATGCAGGCAGGTAGGCATGAGACCCAAGGGAGGGAATTCTaGGAGGGTGCCACTTACGCATCAGGTAGACACCCAGGTCAACAC +
Preference number: 5 (lower is better)
Translates to: LAMQAGRHETQGREF*EGATYASGRHPGQH
Trigger: GTGTTGACCTGGGTGTCTACCTGATGCGTAAGTGGCACCCTCCCAGAATTCCCTCCCTTGGGTCTCATGCCTACCTGCCTGCATCGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557699.5
CDS CCA 90 bp AGAAAGAGGGAGGGAGGAGGACAGAGAGAGAGGTCAGACCCAGAGTaGAGGCTGCAGCCATTGCCTCCCTTGCTAACCTCTGGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: RKREGGGQRERSDPE*RLQPLPPLLTSGWQ
Trigger: TTGCCACCCAGAGGTTAGCAAGGGAGGCAATGGCTGCAGCCTCCACTCTGGGTCTGACCTCTCTCTCTGTCCTCCTCCCTCCCTCTTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557699.5
CDS-3UTR CAA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCCACTGGCCGATGGCGTaGGTGGTGAGCACAGGAAGG +
Preference number: 5 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPHWPMA*VVSTGR
Trigger: CCTTCCTGTGCTCACCACCAACGCCATCGGCCAGTG...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354772.9
ENST00000397267.5
CDS-3UTR CAA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAACACTGGCCGATGGCGTaGGTGGTGAGCACAGGAAGG +
Preference number: 5 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEHWPMA*VVSTGR
Trigger: CCTTCCTGTGCTCACCACCAACGCCATCGGCCAGTG...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354772.9
ENST00000397267.5
CDS-3UTR CAA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAGGCAGGAGCTTGCGCTaGGTCTCCGGCAGCAGCATA +
Preference number: 5 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEGRSLR*VSGSSI
Trigger: TATGCTGCTGCCGGAGACCAAGCGCAAGCTCCTGCC...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CAA 90 bp GTAAGGGTCATGGAGAGAAGAAGGATGCCCCGGCGGCCAAATCGGTCCACGGTGGTCTTCCCGATCTTCTaGCCACCTTTCTGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: VRVMERRRMPRRPNRSTVVFPIF*PPFCVG
Trigger: GCCCACACAGAAAGGTGGCAAGAAGATCGGGAAGAC...CACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS-3UTR CAA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGACAGTGTTGTCGATTTaGCCGCCGCCCCCGCCATTG +
Preference number: 5 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQTVLSI*PPPPPL
Trigger: CAATGGCGGGGGCGGCGGCAAAATCGACAACACTGT...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CAA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAGTCCCGACCTGTCCGTaGGAGGTGGGGGTGATCTCT +
Preference number: 5 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEVPTCP*EVGVIS
Trigger: AGAGATCACCCCCACCTCCAACGGACAGGTCGGGAC...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CAA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCGTCCCGACCTGTCCGTaGGAGGTGGGGGTGATCTCT +
Preference number: 5 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPVPTCP*EVGVIS
Trigger: AGAGATCACCCCCACCTCCAACGGACAGGTCGGGAC...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS CCA 90 bp CCCCAAGGTCAGCAGCACAATCCCGCGACGGCCAAATCTAGAAAGTaGGAAGGGCTTCTGGTCACCCAGACTCTCTGGTGGTGGGAAAGT +
Preference number: 5 (lower is better)
Translates to: PQGQQHNPATAKSRK*EGLLVTQTLWWWES
Trigger: ACTTTCCCACCACCAGAGAGTCTGGGTGACCAGAAGCCCTTCCCACTTTCTAGATTTGGCCGTCGCGGGATTGTGCTGCTGACCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473917.1
CDS-3UTR CAA 90 bp ATAGGATGCTCACAATCCCACAGGCCCAGCAGGACCAGGGAAGCAATGCCGGTAGTTGGGGTTCCCTTGTaGAGCCCACACTGTGGGGAA +
Preference number: 5 (lower is better)
Translates to: IGCSQSHRPSRTREAMPVVGVPL*SPHCGE
Trigger: TTCCCCACAGTGTGGGCTCAACAAGGGAACCCCAAC...TACCGGCATTGCTTCCCTGGTCCTGCTGGGCCTGTGGGATTGTGAGCATCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474774.1
CDS-3UTR CAA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATCTGGGTGGATGTCTTaGGGCGCAGGATGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: WLQCGALSLSPDSGQGSESGWMS*GAGWSP
Trigger: TGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGA...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CAA 90 bp AGAAATAATGAGGTCTGGGTGGATGTCTTTGGGCGCAGGATGGAGCCCAGACCCACAGTGTTGTCGATTTaGCCGCCGCCCCCGCCATTG +
Preference number: 5 (lower is better)
Translates to: RNNEVWVDVFGRRMEPRPTVLSI*PPPPPL
Trigger: CAATGGCGGGGGCGGCGGCAAAATCGACAACACTGT...GGGTCTGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGACCTCATTATTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS-3UTR CAA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATCTGTTGGGGTTCCCTaGTTGAGCCCACACTGTGGG +
Preference number: 5 (lower is better)
Translates to: WLQCGALSLSPDSGQGSESVGVP*LSPHCG
Trigger: CCCACAGTGTGGGCTCAACAAGGGAACCCCAACAGA...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397267.5
CDS-3UTR CAA 90 bp AGCCTCGTTCAGATCTCTGTTGGGGTTCCCTTGTTGAGCCCACACTGTGGGGAATCTGTTGGGGTTCCCTaGTTGAGCCCACACTGTGGG +
Preference number: 5 (lower is better)
Translates to: SLVQISVGVPLLSPHCGESVGVP*LSPHCG
Trigger: CCCACAGTGTGGGCTCAACAAGGGAACCCCAACAGA...TTCCCCACAGTGTGGGCTCAACAAGGGAACCCCAACAGAGATCTGAACGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474774.1
CDS-3UTR CAA 90 bp GAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAATGCAAAGCAGCAGGTGATCTCTACAGTGTaGTCGATTTTGCCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: ELSPCPLTLAKEVNAKQQVISTV*SILPPP
Trigger: GGGCGGCGGCAAAATCGACAACACTGTAGAGATCAC...CTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
CDS TCA 90 bp GCAAGAGCCCTGGATTCTTCAAGGGGGCCTGGGCAGAAAGATAGCTaGGATTCTAGGCAGCTGAAATGTGGCCTAGGGGGCAGTGAGGAT +
Preference number: 5 (lower is better)
Translates to: ARALDSSRGPGQKDS*DSRQLKCGLGGSED
Trigger: ATCCTCACTGCCCCCTAGGCCACATTTCAGCTGCCTAGAATCTCAGCTATCTTTCTGCCCAGGCCCCCTTGAAGAATCCAGGGCTCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557699.5
CDS CCA 90 bp GCCAAATCTAGAAAGTGGGAAGGGCTTCTGGTCACCCAGACTCTCTaGTGGTGGGAAAGTTGCTGGGTAAGACCCAGCTGCACACTTCAG +
Preference number: 5 (lower is better)
Translates to: AKSRKWEGLLVTQTL*WWESCWVRPSCTLQ
Trigger: CTGAAGTGTGCAGCTGGGTCTTACCCAGCAACTTTCCCACCACCAGAGAGTCTGGGTGACCAGAAGCCCTTCCCACTTTCTAGATTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473917.1
CDS-3UTR CAA 90 bp TGGTTACAGTGTGGAGCTCTCTCCCTGTCCCCTGACTCTGGCCAAGGAAGTGAAGCATGGGCAATGAAGTaGGTGAAGCCCAGGATAAGC +
Preference number: 5 (lower is better)
Translates to: WLQCGALSLSPDSGQGSEAWAMK*VKPRIS
Trigger: GCTTATCCTGGGCTTCACCAACTTCATTGCCCATGC...TTCACTTCCTTGGCCAGAGTCAGGGGACAGGGAGAGAGCTCCACACTGTAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
CDS-3UTR CAA 90 bp GAAGCCCAGGATAAGCAGATTTTTCCAGATGTTGCGGTAGTTGAGGAGGGAAGCTCTGGGTGGATGTCTTaGGGCGCAGGATGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: EAQDKQIFPDVAVVEEGSSGWMS*GAGWSP
Trigger: TGGGCTCCATCCTGCGCCCAAAGACATCCACCCAGA...GCTTCCCTCCTCAACTACCGCAACATCTGGAAAAATCTGCTTATCCTGGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397260.7
CDS-3UTR CAA 90 bp CAAACCAGGCCAGCCATAAAACAGGAAGAGGATGCAGGGAGCGGTGATCATTCGGTGATCTCTACAGTGTaGTCGATTTTGCCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: QTRPAIKQEEDAGSGDHSVISTV*SILPPP
Trigger: GGGCGGCGGCAAAATCGACAACACTGTAGAGATCAC...CGAATGATCACCGCTCCCTGCATCCTCTTCCTGTTTTATGGCTGGCCTGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397260.7
ENST00000474057.6
CDS CCA 90 bp AAATCTAGAAAGTGGGAAGGGCTTCTGGTCACCCAGACTCTCTGGTaGTGGGAAAGTTGCTGGGTAAGACCCAGCTGCACACTTCAGAGC +
Preference number: 5 (lower is better)
Translates to: KSRKWEGLLVTQTLW*WESCWVRPSCTLQS
Trigger: GCTCTGAAGTGTGCAGCTGGGTCTTACCCAGCAACTTTCCCACCACCAGAGAGTCTGGGTGACCAGAAGCCCTTCCCACTTTCTAGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473917.1
CDS TCA 90 bp ATCTCTAGAGGTGAAGCTACCGACTCATGGAAACGGGGATTTCGGTaGGAGGATCTCAAAGCCCTGAGGATCCATGAGGGTATGACTGCT +
Preference number: 5 (lower is better)
Translates to: ISRGEATDSWKRGFR*EDLKALRIHEGMTA
Trigger: AGCAGTCATACCCTCATGGATCCTCAGGGCTTTGAGATCCTCTCACCGAAATCCCCGTTTCCATGAGTCGGTAGCTTCACCTCTAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS GCA 90 bp GTCCAAGGTCACACAGCTAGGGACAATCCTTGTCCCTGGACTTACTaGTATCAGGGGAATAGCACCTTATTCCTTGGCAGCAGTAAGTCC +
Preference number: 5 (lower is better)
Translates to: VQGHTARDNPCPWTY*YQGNSTLFLGSSKS
Trigger: GGACTTACTGCTGCCAAGGAATAAGGTGCTATTCCCCTGATAGCAGTAAGTCCAGGGACAAGGATTGTCCCTAGCTGTGTGACCTTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557699.5
CDS CCA 90 bp ATGGGCTATTCCCCTACAGAGCGTTGGGTCATTTGGTGGCAGGCATaGGACTGTGGGTTACTGGGTCTGAGGATATTGTCTTTGGAGATA +
Preference number: 5 (lower is better)
Translates to: MGYSPTERWVIWWQA*DCGLLGLRILSLEI
Trigger: TATCTCCAAAGACAATATCCTCAGACCCAGTAACCCACAGTCCCATGCCTGCCACCAAATGACCCAACGCTCTGTAGGGGAATAGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS TCA 90 bp CTGGGCACTGGGGTGTGGTTGTGGTTCTTTAAGAGGTGGGAACATTaGCTCTTGGGCTATTGGTCAGAGATTAGGGCACTTGTCAATGGA +
Preference number: 5 (lower is better)
Translates to: LGTGVWLWFFKRWEH*LLGYWSEIRALVNG
Trigger: TCCATTGACAAGTGCCCTAATCTCTGACCAATAGCCCAAGAGTCAATGTTCCCACCTCTTAAAGAACCACAACCACACCCCAGTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473917.1
CDS CCA 90 bp CTGGGGTGTGGTTGTGGTTCTTTAAGAGGTGGGAACATTGACTCTTaGGCTATTGGTCAGAGATTAGGGCACTTGTCAATGGATGTGACA +
Preference number: 5 (lower is better)
Translates to: LGCGCGSLRGGNIDS*AIGQRLGHLSMDVT
Trigger: TGTCACATCCATTGACAAGTGCCCTAATCTCTGACCAATAGCCCAAGAGTCAATGTTCCCACCTCTTAAAGAACCACAACCACACCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473917.1
CDS TCA 90 bp TCAACATTTCCAATTTATAGGCCCTTTCCCATCAGGCCTCTTATTTaGCCTTCACATCAACCCTTGTCCAAGGTCACACAGCTAGGGACA +
Preference number: 5 (lower is better)
Translates to: STFPIYRPFPIRPLI*PSHQPLSKVTQLGT
Trigger: TGTCCCTAGCTGTGTGACCTTGGACAAGGGTTGATGTGAAGGTCAAATAAGAGGCCTGATGGGAAAGGGCCTATAAATTGGAAATGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557699.5
CDS TCA 90 bp TTTTTGATCTGTGGGAAGAGTTATTGGTTGCTGGGATTGGGTTGTTaGTCTCTAGAGGTGAAGCTACCGACTCATGGAAACGGGGATTTC +
Preference number: 5 (lower is better)
Translates to: FLICGKSYWLLGLGC*SLEVKLPTHGNGDF
Trigger: GAAATCCCCGTTTCCATGAGTCGGTAGCTTCACCTCTAGAGATCAACAACCCAATCCCAGCAACCAATAACTCTTCCCACAGATCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS CCA 90 bp TCAGTGGTGAAGGTGACCAGAATCAGAGATGAGATTTTTGATCTGTaGGAAGAGTTATTGGTTGCTGGGATTGGGTTGTTGATCTCTAGA +
Preference number: 5 (lower is better)
Translates to: SVVKVTRIRDEIFDL*EELLVAGIGLLISR
Trigger: TCTAGAGATCAACAACCCAATCCCAGCAACCAATAACTCTTCCCACAGATCAAAAATCTCATCTCTGATTCTGGTCACCTTCACCACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS GCA 72 bp CGACCGCAGGGGCCCTGCCGGCCCGCGCCGAAAGGATaGGCTGTCCTCTGGCTCAGTTGCGCGCCGGCTGCC +
Preference number: 6 (lower is better)
Translates to: RPQGPCRPAPKG*AVLWLSCAPAA
Trigger: GGCAGCCGGCGCGCAACTGAGCCAGAGGACAGCGCATCCTTTCGGCGCGGGCCGGCAGGGCCCCTGCGGTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
ENST00000636431.2
CDS GCA 72 bp CCACCCGGGGAGCCAGCTTGCCGACCGCAGGGGCCCTaGCGGCCCGCGCCGAAAGGATGCGCTGTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: PPGEPACRPQGP*RPAPKGCAVLW
Trigger: CCAGAGGACAGCGCATCCTTTCGGCGCGGGCCGGCAGGGCCCCTGCGGTCGGCAAGCTGGCTCCCCGGGTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
ENST00000636431.2
CDS CCA 72 bp CGCTGCACGAGGGGTCGGTACTGGTGGCGACACGGCTaGCGGCGCTGGCTGCTAGGGCAGCGCTGGCGACGC +
Preference number: 6 (lower is better)
Translates to: RCTRGRYWWRHG*RRWLLGQRWRR
Trigger: GCGTCGCCAGCGCTGCCCTAGCAGCCAGCGCCGCCAGCCGTGTCGCCACCAGTACCGACCCCTCGTGCAGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000206544.8
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
ENST00000557699.5
ENST00000636431.2
CDS CCA 72 bp GCGGGGCGAAGCCGCTGCACGAGGGGTCGGTACTGGTaGCGACACGGCTGGCGGCGCTGGCTGCTAGGGCAG +
Preference number: 6 (lower is better)
Translates to: AGRSRCTRGRYW*RHGWRRWLLGQ
Trigger: CTGCCCTAGCAGCCAGCGCCGCCAGCCGTGTCGCCACCAGTACCGACCCCTCGTGCAGCGGCTTCGCCCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000206544.8
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
ENST00000557699.5
ENST00000636431.2
CDS TCA 72 bp TGGCGGCGCTGGCTGCTAGGGCAGCGCTGGCGACGCTaGCGCCGCTGGCATTGGGAGGCTGCTCCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: WRRWLLGQRWRR*RRWHWEAAPSQ
Trigger: CTGGCTGGGAGCAGCCTCCCAATGCCAGCGGCGTCAGCGTCGCCAGCGCTGCCCTAGCAGCCAGCGCCGCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000206544.8
ENST00000354772.9
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
ENST00000557699.5
CDS CCA 72 bp CCCTGCCGGCCCGCGCCGAAAGGATGCGCTGTCCTCTaGCTCAGTTGCGCGCCGGCTGCCCGGACACAGACA +
Preference number: 6 (lower is better)
Translates to: PCRPAPKGCAVL*LSCAPAARTQT
Trigger: TGTCTGTGTCCGGGCAGCCGGCGCGCAACTGAGCCAGAGGACAGCGCATCCTTTCGGCGCGGGCCGGCAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
ENST00000636431.2
CDS CAA 90 bp GCCCTGCCGGCCCGCGCCGAAAGGATGCGCTGTCCTCTGGCTCAGTaGCGCGCCGGCTGCCCGGACACAGACAGCTCGAAGAGATCCCGC +
Preference number: 6 (lower is better)
Translates to: ALPARAERMRCPLAQ*RAGCPDTDSSKRSR
Trigger: GCGGGATCTCTTCGAGCTGTCTGTGTCCGGGCAGCCGGCGCGCAACTGAGCCAGAGGACAGCGCATCCTTTCGGCGCGGGCCGGCAGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
ENST00000636431.2
CDS CCA 72 bp GACGCCGCTGGCATTGGGAGGCCTGCAGCTGCTCCGTaGGCACCGCATCTCCGAGGGTCCCGACCTGTCCGT +
Preference number: 6 (lower is better)
Translates to: DAAGIGRPAAAP*APHLRGSRPVR
Trigger: ACGGACAGGTCGGGACCCTCGGAGATGCGGTGCCCACGGAGCAGCTGCAGGCCTCCCAATGCCAGCGGCGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636431.2
CDS CCA 72 bp AGCGGAGGAAACCGCAGAGCAAGGGCAGGGGGCAGGTaGGAGGGAGGGCTAGGAAGGCAGTCAGGGGCGAGG +
Preference number: 6 (lower is better)
Translates to: SGGNRRARAGGR*EGGLGRQSGAR
Trigger: CCTCGCCCCTGACTGCCTTCCTAGCCCTCCCTCCCACCTGCCCCCTGCCCTTGCTCTGCGGTTTCCTCCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557699.5
CDS CAA 72 bp GCCCGCGCCGAAAGGATGCGCTGTCCTCTGGCTCAGTaGCGCGCCGGCTGCCCGGACACAGACAGCTCGAAG +
Preference number: 6 (lower is better)
Translates to: ARAERMRCPLAQ*RAGCPDTDSSK
Trigger: CTTCGAGCTGTCTGTGTCCGGGCAGCCGGCGCGCAACTGAGCCAGAGGACAGCGCATCCTTTCGGCGCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
ENST00000636431.2
CDS GCA 72 bp CCCGCGCCGAAAGGATGCGCTGTCCTCTGGCTCAGTTaGGCGCCGGCTGCCCGGACACAGACAGCTCGAAGA +
Preference number: 6 (lower is better)
Translates to: PAPKGCAVLWLS*APAARTQTARR
Trigger: TCTTCGAGCTGTCTGTGTCCGGGCAGCCGGCGCGCAACTGAGCCAGAGGACAGCGCATCCTTTCGGCGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
ENST00000636431.2
CDS CAA 72 bp ATCCCGCTCTGCAGCTCTGCAGCCGCGGGCGCCTCCTaGGTCTCTGCGATCTCTGCGCTGCTTTCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: IPLCSSAAAGAS*VSAISALLSPP
Trigger: GGGAGGGGAAAGCAGCGCAGAGATCGCAGAGACCAAGGAGGCGCCCGCGGCTGCAGAGCTGCAGAGCGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397267.5
CDS GCA 72 bp CTGCCCGGACACAGACAGCTCGAAGAGATCCCGCTCTaGAGCTCTGCAGCCGCGGGCGCCTCCTTGGTCTCT +
Preference number: 6 (lower is better)
Translates to: LPGHRQLEEIPL*SSAAAGASLVS
Trigger: AGAGACCAAGGAGGCGCCCGCGGCTGCAGAGCTGCAGAGCGGGATCTCTTCGAGCTGTCTGTGTCCGGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397267.5
ENST00000474057.6
ENST00000636431.2
CDS GCA 72 bp AGGATGCGCTGTCCTCTGGCTCAGTTGCGCGCCGGCTaGCCGGACACAGACAGCTCGAAGAGATCCCGCTCT +
Preference number: 6 (lower is better)
Translates to: RMRCPLAQLRAG*PDTDSSKRSRS
Trigger: AGAGCGGGATCTCTTCGAGCTGTCTGTGTCCGGGCAGCCGGCGCGCAACTGAGCCAGAGGACAGCGCATCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397260.7
ENST00000397267.5
ENST00000474057.6
ENST00000636431.2
CDS GCA 72 bp ACACAGACAGCTCGAAGAGATCCCGCTCTGCAGCTCTaGAGCCGCGGGCGCCTCCTTGGTCTCTGCGATCTC +
Preference number: 6 (lower is better)
Translates to: TQTARRDPALQL*SRGRLLGLCDL
Trigger: GAGATCGCAGAGACCAAGGAGGCGCCCGCGGCTGCAGAGCTGCAGAGCGGGATCTCTTCGAGCTGTCTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397267.5
ENST00000474057.6
CDS CCA 72 bp CAGCAGCACAATCCCGCGACGGCCAAATCTAGAAAGTaGGAAGGGCTTCTGGTCACCCAGACTCTCTGGTGG +
Preference number: 6 (lower is better)
Translates to: QQHNPATAKSRK*EGLLVTQTLWW
Trigger: CCACCAGAGAGTCTGGGTGACCAGAAGCCCTTCCCACTTTCTAGATTTGGCCGTCGCGGGATTGTGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473917.1
CDS CCA 72 bp TGGGAAGGGCTTCTGGTCACCCAGACTCTCTGGTGGTaGGAAAGTTGCTGGGTAAGACCCAGCTGCACACTT +
Preference number: 6 (lower is better)
Translates to: WEGLLVTQTLWW*ESCWVRPSCTL
Trigger: AAGTGTGCAGCTGGGTCTTACCCAGCAACTTTCCCACCACCAGAGAGTCTGGGTGACCAGAAGCCCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473917.1
CDS CCA 72 bp CCGCGACGGCCAAATCTAGAAAGTGGGAAGGGCTTCTaGTCACCCAGACTCTCTGGTGGTGGGAAAGTTGCT +
Preference number: 6 (lower is better)
Translates to: PRRPNLESGKGF*SPRLSGGGKVA
Trigger: AGCAACTTTCCCACCACCAGAGAGTCTGGGTGACCAGAAGCCCTTCCCACTTTCTAGATTTGGCCGTCGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473917.1
CDS TCA 72 bp GGTGAAGCTACCGACTCATGGAAACGGGGATTTCGGTaGGAGGATCTCAAAGCCCTGAGGATCCATGAGGGT +
Preference number: 6 (lower is better)
Translates to: GEATDSWKRGFR*EDLKALRIHEG
Trigger: ACCCTCATGGATCCTCAGGGCTTTGAGATCCTCTCACCGAAATCCCCGTTTCCATGAGTCGGTAGCTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS CCA 72 bp TCCCCTACAGAGCGTTGGGTCATTTGGTGGCAGGCATaGGACTGTGGGTTACTGGGTCTGAGGATATTGTCT +
Preference number: 6 (lower is better)
Translates to: SPTERWVIWWQA*DCGLLGLRILS
Trigger: AGACAATATCCTCAGACCCAGTAACCCACAGTCCCATGCCTGCCACCAAATGACCCAACGCTCTGTAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS CAA 72 bp ATCTATGGGCTATTCCCCTACAGAGCGTTGGGTCATTaGGTGGCAGGCATGGGACTGTGGGTTACTGGGTCT +
Preference number: 6 (lower is better)
Translates to: IYGLFPYRALGH*VAGMGLWVTGS
Trigger: AGACCCAGTAACCCACAGTCCCATGCCTGCCACCAAATGACCCAACGCTCTGTAGGGGAATAGCCCATAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS CAA 90 bp CACTTCAGAGCTAGAGGTATGAGAATGAAGTTCTGGGAGCAAGAGTaGGACAGAGGCTTGAGAAGATGGGGAGGGATGGGGACCATGGGT +
Preference number: 6 (lower is better)
Translates to: HFRARGMRMKFWEQE*DRGLRRWGGMGTMG
Trigger: ACCCATGGTCCCCATCCCTCCCCATCTTCTCAAGCCTCTGTCCAACTCTTGCTCCCAGAACTTCATTCTCATACCTCTAGCTCTGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473917.1
CDS GCA 72 bp CACACAGCTAGGGACAATCCTTGTCCCTGGACTTACTaGTATCAGGGGAATAGCACCTTATTCCTTGGCAGC +
Preference number: 6 (lower is better)
Translates to: HTARDNPCPWTY*YQGNSTLFLGS
Trigger: GCTGCCAAGGAATAAGGTGCTATTCCCCTGATAGCAGTAAGTCCAGGGACAAGGATTGTCCCTAGCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557699.5
CDS CCA 72 bp AGAGCGTTGGGTCATTTGGTGGCAGGCATGGGACTGTaGGTTACTGGGTCTGAGGATATTGTCTTTGGAGAT +
Preference number: 6 (lower is better)
Translates to: RALGHLVAGMGL*VTGSEDIVFGD
Trigger: ATCTCCAAAGACAATATCCTCAGACCCAGTAACCCACAGTCCCATGCCTGCCACCAAATGACCCAACGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS TCA 72 bp CTGGGTCTGAGGATATTGTCTTTGGAGATAGTTAGTTaGCTTGTAGGGGAGGGGTCGCTGGTCAGAAATGGG +
Preference number: 6 (lower is better)
Translates to: LGLRILSLEIVS*LVGEGSLVRNG
Trigger: CCCATTTCTGACCAGCGACCCCTCCCCTACAAGTCAACTAACTATCTCCAAAGACAATATCCTCAGACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS CCA 72 bp GTCCAAGGTCACACAGCTAGGGACAATCCTTGTCCCTaGACTTACTGCTATCAGGGGAATAGCACCTTATTC +
Preference number: 6 (lower is better)
Translates to: VQGHTARDNPCP*TYCYQGNSTLF
Trigger: GAATAAGGTGCTATTCCCCTGATAGCAGTAAGTCCAGGGACAAGGATTGTCCCTAGCTGTGTGACCTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557699.5
CDS CCA 72 bp GGAATGAGGTCACTGAGATGGAGCGAACAGTCCATGTaGGCTGTTAGTGGGGATGAGACTATTCTCTTTGGA +
Preference number: 6 (lower is better)
Translates to: GMRSLRWSEQSM*AVSGDETILFG
Trigger: TCCAAAGAGAATAGTCTCATCCCCACTAACAGCCCACATGGACTGTTCGCTCCATCTCAGTGACCTCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS TCA 72 bp GGGGTGTGGTTGTGGTTCTTTAAGAGGTGGGAACATTaGCTCTTGGGCTATTGGTCAGAGATTAGGGCACTT +
Preference number: 6 (lower is better)
Translates to: GVWLWFFKRWEH*LLGYWSEIRAL
Trigger: AAGTGCCCTAATCTCTGACCAATAGCCCAAGAGTCAATGTTCCCACCTCTTAAAGAACCACAACCACACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473917.1
CDS TCA 72 bp TCAATGGGGCTGAGTCTAATCGGAAGTTTAGTGCAGTaGGAGCATCTGGTCAGTGGTGAAGGTGACCAGAAT +
Preference number: 6 (lower is better)
Translates to: SMGLSLIGSLVQ*EHLVSGEGDQN
Trigger: ATTCTGGTCACCTTCACCACTGACCAGATGCTCTCACTGCACTAAACTTCCGATTAGACTCAGCCCCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS CAA 72 bp TTCCCTTGCGCGGAAGAGGTAGGGAAGGGGTATTTCTaGATGGAGAGTGAAGTTGAGACATGGATAGACCAT +
Preference number: 6 (lower is better)
Translates to: FPCAEEVGKGYF*MESEVETWIDH
Trigger: ATGGTCTATCCATGTCTCAACTTCACTCTCCATCAAGAAATACCCCTTCCCTACCTCTTCCGCGCAAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS CAA 72 bp GATCTGTGGGAAGAGTTATTGGTTGCTGGGATTGGGTaGTTGATCTCTAGAGGTGAAGCTACCGACTCATGG +
Preference number: 6 (lower is better)
Translates to: DLWEELLVAGIG*LISRGEATDSW
Trigger: CCATGAGTCGGTAGCTTCACCTCTAGAGATCAACAACCCAATCCCAGCAACCAATAACTCTTCCCACAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS CAA 90 bp GGTGGGAACATTGACTCTTGGGCTATTGGTCAGAGATTAGGGCACTaGTCAATGGATGTGACATCACTCAACAGAGGGGATGGGATATTG +
Preference number: 6 (lower is better)
Translates to: GGNIDSWAIGQRLGH*SMDVTSLNRGDGIL
Trigger: CAATATCCCATCCCCTCTGTTGAGTGATGTCACATCCATTGACAAGTGCCCTAATCTCTGACCAATAGCCCAAGAGTCAATGTTCCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473917.1
CDS CAA 90 bp GAGATTTTTGATCTGTGGGAAGAGTTATTGGTTGCTGGGATTGGGTaGTTGATCTCTAGAGGTGAAGCTACCGACTCATGGAAACGGGGA +
Preference number: 6 (lower is better)
Translates to: EIFDLWEELLVAGIG*LISRGEATDSWKRG
Trigger: TCCCCGTTTCCATGAGTCGGTAGCTTCACCTCTAGAGATCAACAACCCAATCCCAGCAACCAATAACTCTTCCCACAGATCAAAAATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS TCA 72 bp CCAATTTATAGGCCCTTTCCCATCAGGCCTCTTATTTaGCCTTCACATCAACCCTTGTCCAAGGTCACACAG +
Preference number: 6 (lower is better)
Translates to: PIYRPFPIRPLI*PSHQPLSKVTQ
Trigger: CTGTGTGACCTTGGACAAGGGTTGATGTGAAGGTCAAATAAGAGGCCTGATGGGAAAGGGCCTATAAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557699.5
CDS TCA 72 bp TGTGGGAAGAGTTATTGGTTGCTGGGATTGGGTTGTTaGTCTCTAGAGGTGAAGCTACCGACTCATGGAAAC +
Preference number: 6 (lower is better)
Translates to: CGKSYWLLGLGC*SLEVKLPTHGN
Trigger: GTTTCCATGAGTCGGTAGCTTCACCTCTAGAGATCAACAACCCAATCCCAGCAACCAATAACTCTTCCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS CAA 72 bp CTGTGGGAAGAGTTATTGGTTGCTGGGATTGGGTTGTaGATCTCTAGAGGTGAAGCTACCGACTCATGGAAA +
Preference number: 6 (lower is better)
Translates to: LWEELLVAGIGL*ISRGEATDSWK
Trigger: TTTCCATGAGTCGGTAGCTTCACCTCTAGAGATCAACAACCCAATCCCAGCAACCAATAACTCTTCCCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS CCA 72 bp GGTTGTGGTTCTTTAAGAGGTGGGAACATTGACTCTTaGGCTATTGGTCAGAGATTAGGGCACTTGTCAATG +
Preference number: 6 (lower is better)
Translates to: GCGSLRGGNIDS*AIGQRLGHLSM
Trigger: CATTGACAAGTGCCCTAATCTCTGACCAATAGCCCAAGAGTCAATGTTCCCACCTCTTAAAGAACCACAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473917.1
CDS CAA 90 bp ATTTTTGATCTGTGGGAAGAGTTATTGGTTGCTGGGATTGGGTTGTaGATCTCTAGAGGTGAAGCTACCGACTCATGGAAACGGGGATTT +
Preference number: 6 (lower is better)
Translates to: IFDLWEELLVAGIGL*ISRGEATDSWKRGF
Trigger: AAATCCCCGTTTCCATGAGTCGGTAGCTTCACCTCTAGAGATCAACAACCCAATCCCAGCAACCAATAACTCTTCCCACAGATCAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS CAA 90 bp GTGACCAGAATCAGAGATGAGATTTTTGATCTGTGGGAAGAGTTATaGGTTGCTGGGATTGGGTTGTTGATCTCTAGAGGTGAAGCTACC +
Preference number: 6 (lower is better)
Translates to: VTRIRDEIFDLWEEL*VAGIGLLISRGEAT
Trigger: GGTAGCTTCACCTCTAGAGATCAACAACCCAATCCCAGCAACCAATAACTCTTCCCACAGATCAAAAATCTCATCTCTGATTCTGGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS CCA 72 bp AAGGTGACCAGAATCAGAGATGAGATTTTTGATCTGTaGGAAGAGTTATTGGTTGCTGGGATTGGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: KVTRIRDEIFDL*EELLVAGIGLL
Trigger: CAACAACCCAATCCCAGCAACCAATAACTCTTCCCACAGATCAAAAATCTCATCTCTGATTCTGGTCACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS CAA 72 bp TGGGAATGGAGCTGTTGGTGTTTAGGAATTAACATATaGATCTTCAGGAATGAGGTCACTGAGATGGAGCGA +
Preference number: 6 (lower is better)
Translates to: WEWSCWCLGINI*IFRNEVTEMER
Trigger: TCGCTCCATCTCAGTGACCTCATTCCTGAAGATCAATATGTTAATTCCTAAACACCAACAGCTCCATTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556803.1
CDS CAA 90 bp ATTGATCAGTGGGAATGGAGCTGTTGGTGTTTAGGAATTAACATATaGATCTTCAGGAATGAGGTCACTGAGATGGAGCGAACAGTCCAT +
Preference number: 6 (lower is better)
Translates to: IDQWEWSCWCLGINI*IFRNEVTEMERTVH
Trigger: ATGGACTGTTCGCTCCATCTCAGTGACCTCATTCCTGAAGATCAATATGTTAATTCCTAAACACCAACAGCTCCATTCCCACTGATCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556803.1