RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC22A12 (Homo sapiens)

Ensembl gene IDs: ENSG00000197891

Ensembl transcript IDs: ENST00000336464.7, ENST00000377567.6, ENST00000377572.5, ENST00000377574.6, ENST00000473690.5

Found 486 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCCTGACCCCTCTGCTCTCCGAAGCCACGAGGGCAGGGCAGGGTaGTGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTC +
Preference number: 1 (lower is better)
Translates to: GPDPSALRSHEGRAG*WCTGSPPANQTVLF
Trigger: GAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGAGAGCAGAGGGGTCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR CCA 90 bp CCATGGATGGTGGTTAGCTCTGAGCTCTGGGCAGGTGGACGGGTGTaGGGGGACAAGTGGCAGTGCGGAGTCAAGCAGAGGGTTGGCAAG +
Preference number: 1 (lower is better)
Translates to: PWMVVSSELWAGGRV*GDKWQCGVKQRVGK
Trigger: CTTGCCAACCCTCTGCTTGACTCCGCACTGCCACTTGTCCCCCCACACCCGTCCACCTGCCCAGAGCTCAGAGCTAACCACCATCCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR TCA 90 bp GGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTaGGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATG +
Preference number: 1 (lower is better)
Translates to: GQGPGLQGFWVKLWS*DSTACVELGEVLTM
Trigger: CATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR CCA 90 bp GGGGAGAGTGGGGACCTCAGAGGGCAGCCTCTGGGCCTCTGGAAATaGAGGTCTTTGCTTTCCTCCTGCCTTCTCCAGAGAACAGAAGAA +
Preference number: 1 (lower is better)
Translates to: GESGDLRGQPLGLWK*RSLLSSCLLQRTEE
Trigger: TTCTTCTGTTCTCTGGAGAAGGCAGGAGGAAAGCAAAGACCTCCATTTCCAGAGGCCCAGAGGCTGCCCTCTGAGGTCCCCACTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR CCA 90 bp CTCTGCTCTCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTaGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTAT +
Preference number: 1 (lower is better)
Translates to: LCSPKPRGQGRVMVH*VTSCQSNCPFPLQY
Trigger: ATACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGAGAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR GCA 90 bp GGGACCTCAGAGGGCAGCCTCTGGGCCTCTGGAAATGGAGGTCTTTaGTTTCCTCCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCT +
Preference number: 1 (lower is better)
Translates to: GTSEGSLWASGNGGL*FPPAFSREQKKSLP
Trigger: AGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGGAGGAAAGCAAAGACCTCCATTTCCAGAGGCCCAGAGGCTGCCCTCTGAGGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR CCA 90 bp CCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTaGCCCAGCGCTGTGTGGGGAGCTGGGACATGGGGTCATGGGACT +
Preference number: 1 (lower is better)
Translates to: PFICFFIQSLAPMPL*PSAVWGAGTWGHGT
Trigger: AGTCCCATGACCCCATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000473690.5
3UTR-3UTR TCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAGGGCCCCTTGGACTGTaGGAGGGGCAGGGCTCACCT +
Preference number: 2 (lower is better)
Translates to: SEATRAGQGDGALGHLLPGPLGL*EGQGSP
Trigger: AGGTGAGCCCTGCCCCTCTCACAGTCCAAGGGGCCC...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAAGCCCTGGGGGAGAGTaGGGACCTCAGAGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: SEATRAGQGDGALGHLLPSPGGE*GPQRAA
Trigger: GGCTGCCCTCTGAGGTCCCCACTCTCCCCCAGGGCT...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR TCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCGAGGGCAGGGCAGGGTaGTGGTGCACTGGGTCACCT +
Preference number: 2 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLEGRAG*WCTGSP
Trigger: AGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTC...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR TCA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTGAGGGCAGGGCAGGGTaGTGGTGCACTGGGTCACCT +
Preference number: 2 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPEGRAG*WCTGSP
Trigger: AGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTC...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGAGCCCTGGGGGAGAGTaGGGACCTCAGAGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLSPGGE*GPQRAA
Trigger: GGCTGCCCTCTGAGGTCCCCACTCTCCCCCAGGGCT...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR TCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGGAGGGCAGGGCAGGGTaGTGGTGCACTGGGTCACCT +
Preference number: 2 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMEGRAG*WCTGSP
Trigger: AGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTC...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCAGCCCTGGGGGAGAGTaGGGACCTCAGAGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: GPGARLTGLLGKAVELRLSPGGE*GPQRAA
Trigger: GGCTGCCCTCTGAGGTCCCCACTCTCCCCCAGGGCT...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGGCAGGTGGACGGGTGTaGGGGGACAAGTGGCAGTGC +
Preference number: 2 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRAGGRV*GDKWQC
Trigger: GCACTGCCACTTGTCCCCCCACACCCGTCCACCTGC...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGGATGTGGCGGGCAGGTaGCTGAGGCCTGGAGGGACA +
Preference number: 2 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRDVAGR*LRPGGT
Trigger: TGTCCCTCCAGGCCTCAGCCACCTGCCCGCCACATC...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGACGGGCATCTCAGGCTaGCCCTGGACCCCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRTGISG*PWTPGR
Trigger: CCTTCCAGGGGTCCAGGGCCAGCCTGAGATGCCCGT...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGGTTAGCTCTGAGCTCTaGGCAGGTGGACGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRVSSEL*AGGRVW
Trigger: CCACACCCGTCCACCTGCCCAGAGCTCAGAGCTAAC...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR TCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAAGAAGTCTCTTCCTCTaGCCGTCCCATCGCAGGTTC +
Preference number: 2 (lower is better)
Translates to: SEATRAGQGDGALGHLLPRSLFL*PSHRRF
Trigger: GAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCT...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR TCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGAGAAGTCTCTTCCTCTaGCCGTCCCATCGCAGGTTC +
Preference number: 2 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMRSLFL*PSHRRF
Trigger: GAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCT...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCACTGGGCCTCTGGAAATaGAGGTCTTTGCTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: SEATRAGQGDGALGHLLPLGLWK*RSLLSS
Trigger: GGAGGAAAGCAAAGACCTCCATTTCCAGAGGCCCAG...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCACAGCCTCTGGGCCTCTaGAAATGGAGGTCTTTGCTT +
Preference number: 2 (lower is better)
Translates to: SEATRAGQGDGALGHLLPQPLGL*KWRSLL
Trigger: AAGCAAAGACCTCCATTTCCAGAGGCCCAGAGGCTG...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGAGGGTGATGGTGCACTaGGTCACCTCCTGCCAATCA +
Preference number: 2 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRRVMVH*VTSCQS
Trigger: TGATTGGCAGGAGGTGACCCAGTGCACCATCACCCT...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR TCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGAGAAGTCTCTTCCTCTaGCCGTCCCATCGCAGGTTC +
Preference number: 2 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGRSLFL*PSHRRF
Trigger: GAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCT...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR GCA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTGGAAATGGAGGTCTTTaGTTTCCTCCTGCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPGNGGL*FPPAFS
Trigger: GGAGAAGGCAGGAGGAAAGCAAAGACCTCCATTTCC...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGCTGGGCCTCTGGAAATaGAGGTCTTTGCTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMLGLWK*RSLLSS
Trigger: GGAGGAAAGCAAAGACCTCCATTTCCAGAGGCCCAG...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGAGCCCTGGGGGAGAGTaGGGACCTCAGAGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQSPGGE*GPQRAA
Trigger: GGCTGCCCTCTGAGGTCCCCACTCTCCCCCAGGGCT...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGAGGGTGATGGTGCACTaGGTCACCTCCTGCCAATCA +
Preference number: 2 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGRVMVH*VTSCQS
Trigger: TGATTGGCAGGAGGTGACCCAGTGCACCATCACCCT...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGTTAGCTCTGAGCTCTaGGCAGGTGGACGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: LFNPSHQCLSGPALCGELVSSEL*AGGRVW
Trigger: CCACACCCGTCCACCTGCCCAGAGCTCAGAGCTAAC...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR TCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTAGGGCCCCTTGGACTGTaGGAGGGGCAGGGCTCACCT +
Preference number: 2 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVGPLGL*EGQGSP
Trigger: AGGTGAGCCCTGCCCCTCTCACAGTCCAAGGGGCCC...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR TCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGGTAAAGCTGTGGAGCTaGGACTCTACTGCTTGTGTG +
Preference number: 2 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRVKLWS*DSTACV
Trigger: CACACAAGCAGTAGAGTCTCAGCTCCACAGCTTTAC...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCCAGCCTCTGGGCCTCTaGAAATGGAGGTCTTTGCTT +
Preference number: 2 (lower is better)
Translates to: GPGARLTGLLGKAVELRLQPLGL*KWRSLL
Trigger: AAGCAAAGACCTCCATTTCCAGAGGCCCAGAGGCTG...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR TCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGGTAAAGCTGTGGAGCTaGGACTCTACTGCTTGTGTG +
Preference number: 2 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGVKLWS*DSTACV
Trigger: CACACAAGCAGTAGAGTCTCAGCTCCACAGCTTTAC...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR GCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGCACTGGGTCACCTCCTaGCAATCAAACTGTCCTTTT +
Preference number: 2 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRHWVTS*QSNCPF
Trigger: AAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTG...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGAGGGTGATGGTGCACTaGGTCACCTCCTGCCAATCA +
Preference number: 2 (lower is better)
Translates to: LFNPSHQCLSGPALCGELRVMVH*VTSCQS
Trigger: TGATTGGCAGGAGGTGACCCAGTGCACCATCACCCT...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR CAA 90 bp GGGGACCTCAGAGGGCAGCCTCTGGGCCTCTGGAAATGGAGGTCTTaGCTTTCCTCCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: GDLRGQPLGLWKWRS*LSSCLLQRTEEVSS
Trigger: GGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGGAGGAAAGCAAAGACCTCCATTTCCAGAGGCCCAGAGGCTGCCCTCTGAGGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGCTGGGCCTCTGGAAATaGAGGTCTTTGCTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWLGLWK*RSLLSS
Trigger: GGAGGAAAGCAAAGACCTCCATTTCCAGAGGCCCAG...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR CAA 90 bp CTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCTACTGCTaGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGTGGTTAGCT +
Preference number: 2 (lower is better)
Translates to: LTGLLGKAVELRLYC*CGARRGLDHGWWLA
Trigger: AGCTAACCACCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR GCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGGGAAATGGAGGTCTTTaGTTTCCTCCTGCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWGNGGL*FPPAFS
Trigger: GGAGAAGGCAGGAGGAAAGCAAAGACCTCCATTTCC...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR GCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTAGGAAATGGAGGTCTTTaGTTTCCTCCTGCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVGNGGL*FPPAFS
Trigger: GGAGAAGGCAGGAGGAAAGCAAAGACCTCCATTTCC...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CAA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGGAGTCAAGCAGAGGGTaGGCAAGGCCAGCTCGTTCC +
Preference number: 3 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRESSRG*ARPARS
Trigger: GGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTC...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR-3UTR CAA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGGAGTCAAGCAGAGGGTaGGCAAGGCCAGCTCGTTCC +
Preference number: 3 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGESSRG*ARPARS
Trigger: GGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTC...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR CCA 72 bp CCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTaGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCC +
Preference number: 3 (lower is better)
Translates to: PKPRGQGRVMVH*VTSCQSNCPFP
Trigger: GGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR TCA 72 bp CCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTaGGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTC +
Preference number: 3 (lower is better)
Translates to: PGLQGFWVKLWS*DSTACVELGEV
Trigger: GACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
3UTR GCA 72 bp CATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATaGCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGA +
Preference number: 3 (lower is better)
Translates to: HSFVSLFNPSHQ*LSGPALCGELG
Trigger: TCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000473690.5
CDS-3UTR GCA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTTTGCTGCCCAGGGCCTaGAGGTCCAGGGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPLLPRA*RSRARP
Trigger: CGGCCTGGCCCTGGACCTGCAGGCCCTGGGCAGCAA...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCATGCCAGCAACAGGGATaGGGCCAGCGTGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPCQQQG*GQRGAA
Trigger: CGCCGCCCCACGCTGGCCGCATCCCTGTTGCTGGCA...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCGGCCCTGAGGCCGCGTaGGGTGATTCCGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLGPEAA*GDSETS
Trigger: GGAGGTCTCGGAATCACCTCACGCGGCCTCAGGGCC...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGTGCCAGCCACCTGTCTaGGGCAGGGCCGCACGCAGC +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMCQPPV*GRAARS
Trigger: GCTGCGTGCGGCCCTGCCTCAGACAGGTGGCTGGCA...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377567.6
ENST00000377572.5
CDS-3UTR TCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCGGGCCCCTTGGACTGTaGGAGGGGCAGGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLGPLGL*EGQGSP
Trigger: AGGTGAGCCCTGCCCCTCTCACAGTCCAAGGGGCCC...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGTTGCTGCCCAGGGCCTaGAGGTCCAGGGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRLLPRA*RSRARP
Trigger: CGGCCTGGCCCTGGACCTGCAGGCCCTGGGCAGCAA...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGTGCCAGCAACAGGGATaGGGCCAGCGTGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLCQQQG*GQRGAA
Trigger: CGCCGCCCCACGCTGGCCGCATCCCTGTTGCTGGCA...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAGCCTGCTCCCTTCGGTaGCCCTGTGTGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPACSLR*PCVPTS
Trigger: GGAGGTGGGCACACAGGGGCACCGAAGGGAGCAGGC...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR CCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGGCAGGGTGCCCAGGCTaGCAGGAGGCTGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRAGCPG*QEAGPC
Trigger: GCATGGGCCAGCCTCCTGCCAGCCTGGGCACCCTGC...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCCCAGAGGCCCCAGGATaGCTCCTCCACGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLPEAPG*LLHGLP
Trigger: TGGCAGCCCGTGGAGGAGCCATCCTGGGGCCTCTGG...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCCAGGCTGTGTGGCCTaGCCCCACCCGTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLPGCVA*PHPWLL
Trigger: CAGGAGCCACGGGTGGGGCCAGGCCACACAGCCTGG...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR TCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGGGCCCTGAGGCCGCGTaGGGTGATTCCGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMGPEAA*GDSETS
Trigger: GGAGGTCTCGGAATCACCTCACGCGGCCTCAGGGCC...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCACCAGCCTGCCTGTGGTaGGGAGCCATCGTGCCGACT +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPPACLW*GAIVPT
Trigger: AGTCGGCACGATGGCTCCTCACCACAGGCAGGCTGG...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGCAAGGGTCGGGCCCGTaGCGCCGTCCACTCCATCAC +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRQGSGP*RRPLHH
Trigger: GTGATGGAGTGGACGGCGGCACGGGCCCGACCCTTG...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473690.5
CDS-3UTR GCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCTTGCTGCCCAGGGCCTaGAGGTCCAGGGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: GPGARLTGLLGKAVELRLLLPRA*RSRARP
Trigger: CGGCCTGGCCCTGGACCTGCAGGCCCTGGGCAGCAA...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGGGCTCCTCCACGGGCTaGCATCTGGCCCAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLGSSTG*HLAQAH
Trigger: GTGGGCTTGGGCCAGATGGCAGCCCGTGGAGGAGCC...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCACTCGGGCAGAAGCAGTaGGGCCAGGCCACTCAGCAC +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPLGQKQ*GQATQH
Trigger: GTGCTGAGTGGCCTGGCCGCACTGCTTCTGCCCGAG...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGCAAGGGTCGGGCCCGTaGCGCCGTCCACTCCATCAG +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMQGSGP*RRPLHQ
Trigger: CTGATGGAGTGGACGGCGGCACGGGCCCGACCCTTG...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377574.6
CDS-3UTR GCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCCAGCTGCCCAGCCCCTaGGCCTCCCAGGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GPGARLTGLLGKAVELRLQLPSP*ASQAVW
Trigger: CCACACAGCCTGGGAGGCGCAGGGGCTGGGCAGCTG...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR GCA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTGATGCCAGGGCTGCCTaGTCCCTTCGGTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPDARAA*SLRCPC
Trigger: ACAGGGGCACCGAAGGGAGCAGGCAGCCCTGGCATC...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR CCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGTGGGGTGGCTCCAACTaGGCCCTGAGGCCGCGTGAG +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRWGGSN*ALRPRE
Trigger: CTCACGCGGCCTCAGGGCCCAGTTGGAGCCACCCCA...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCGGTGGTGCCCACAGTaGCTTCTCCAGCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLRWCPQ*LLQPSG
Trigger: GCCGCTGGGCTGGAGAAGCCACTGTGGGCACCACCG...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGCGGTGGTGCCCACAGTaGCTTCTCCAGCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRRWCPQ*LLQPSG
Trigger: GCCGCTGGGCTGGAGAAGCCACTGTGGGCACCACCG...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGCGGTGGTGCCCACAGTaGCTTCTCCAGCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMRWCPQ*LLQPSG
Trigger: GCCGCTGGGCTGGAGAAGCCACTGTGGGCACCACCG...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCCCCAGCAGCGGTGGCTaGGCACGGCGGCCGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GPGARLTGLLGKAVELRLPSSGG*ARRPRS
Trigger: ACTTCTCGGCCGCCGTGCCCAGCCACCGCTGCTGGG...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGCCACGGGCTGCCATCTaGCCCAAGCCCACTGCCGTC +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRPRAAI*PKPTAV
Trigger: GACGGCAGTGGGCTTGGGCCAGATGGCAGCCCGTGG...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCCAGAGGCCCCAGGATaGCTCCTCCACGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLPEAPG*LLHGLP
Trigger: TGGCAGCCCGTGGAGGAGCCATCCTGGGGCCTCTGG...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGAGCCCTGGGGGAGAGTaGGGACCTCAGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRSPGGE*GPQRAA
Trigger: GGCTGCCCTCTGAGGTCCCCACTCTCCCCCAGGGCT...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGAGCCCTGGGGGAGAGTaGGGACCTCAGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMSPGGE*GPQRAA
Trigger: GGCTGCCCTCTGAGGTCCCCACTCTCCCCCAGGGCT...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCGATGTGGCGGGCAGGTaGCTGAGGCCTGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLDVAGR*LRPGGT
Trigger: TGTCCCTCCAGGCCTCAGCCACCTGCCCGCCACATC...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTGATGTGGCGGGCAGGTaGCTGAGGCCTGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPDVAGR*LRPGGT
Trigger: TGTCCCTCCAGGCCTCAGCCACCTGCCCGCCACATC...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCACGGGCATCTCAGGCTaGCCCTGGACCCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLTGISG*PWTPGR
Trigger: CCTTCCAGGGGTCCAGGGCCAGCCTGAGATGCCCGT...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCACCTAGGATGCTGGCCTaGGCCGTGCTGTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPPRMLA*AVLLSR
Trigger: CCTGGACAACAGCACGGCTCAGGCCAGCATCCTAGG...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGCCAGCCTGCCTGTGGTaGGGAGCCATCGTGCCGACT +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMPACLW*GAIVPT
Trigger: AGTCGGCACGATGGCTCCTCACCACAGGCAGGCTGG...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGCCAGCCTGCCTGTGGTaGGGAGCCATCGTGCCGACT +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRPACLW*GAIVPT
Trigger: AGTCGGCACGATGGCTCCTCACCACAGGCAGGCTGG...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGGAGGGCAGGGCAGGGTaGTGGTGCACTGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLEGRAG*WCTGSP
Trigger: AGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTC...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCACCTCCCAGAGTGGCTaGGCCAAGAGAAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLTSQSG*AKRRWA
Trigger: GGCCCACCTTCTCTTGGCTCAGCCACTCTGGGAGGT...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR GCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCATGCTGGCCTGAGCCGTaGTGTTGTCCAGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPCWPEP*CCPGGV
Trigger: CACCCCTCCTGGACAACAGCACGGCTCAGGCCAGCA...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGCAGGAGGCTGGCCCATaGTCAGCTCCTCCCGCATGG +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMQEAGP*SAPPAW
Trigger: CCATGCGGGAGGAGCTGAGCATGGGCCAGCCTCCTG...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGCAGGAGGCTGGCCCATaGTCAGCTCCTCCCGCATGG +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRQEAGP*SAPPAW
Trigger: CCATGCGGGAGGAGCTGAGCATGGGCCAGCCTCCTG...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGGGCTCCTCCACGGGCTaGCATCTGGCCCAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGGSSTG*HLAQAH
Trigger: GTGGGCTTGGGCCAGATGGCAGCCCGTGGAGGAGCC...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCGGGCAGAAGCAGTaGGGCCAGGCCACTCAGCAC +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLLGQKQ*GQATQH
Trigger: GTGCTGAGTGGCCTGGCCGCACTGCTTCTGCCCGAG...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGCCCACCCGTGGCTCCTaGCTCCACTCACCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMPTRGS*LHSPAV
Trigger: CACAGCAGGTGAGTGGAGGCAGGAGCCACGGGTGGG...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR CCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGTGGGGTGGCTCCAACTaGGCCCTGAGGCCGCGTGAG +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGWGGSN*ALRPRE
Trigger: CTCACGCGGCCTCAGGGCCCAGTTGGAGCCACCCCA...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCACCTGCTGGTGTCACTTaGGGTGGCTCCAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPPAGVT*GGSNWA
Trigger: GGCCCAGTTGGAGCCACCCCAAGTGACACCAGCAGG...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGAGGCTGGCAGGAGGCTaGCCCATGCTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMRLAGG*PMLSSS
Trigger: GGAGGAGCTGAGCATGGGCCAGCCTCCTGCCAGCCT...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAGGGGCACCAGCGTGTTaGCCAGAATGCAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPGAPAC*PECRAL
Trigger: CAGGGCTCTGCATTCTGGCCAACACGCTGGTGCCCC...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTAGAGCCCCCATTTCGTaGGGCACCAGCGTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPRAPIS*GTSVLA
Trigger: GGCCAACACGCTGGTGCCCCACGAAATGGGGGCTCT...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCCCACGGGCTGCCATCTaGCCCAAGCCCACTGCCGTC +
Preference number: 4 (lower is better)
Translates to: GPGARLTGLLGKAVELRLPRAAI*PKPTAV
Trigger: GACGGCAGTGGGCTTGGGCCAGATGGCAGCCCGTGG...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCCCAGAGGCCCCAGGATaGCTCCTCCACGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GPGARLTGLLGKAVELRLPEAPG*LLHGLP
Trigger: TGGCAGCCCGTGGAGGAGCCATCCTGGGGCCTCTGG...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTGGCAGCGGCAAGCTCTaGGTCTCGGGCAGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPGSGKL*VSGRSS
Trigger: ACTGCTTCTGCCCGAGACCCAGAGCTTGCCGCTGCC...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTTGGGGAGCTGGGACATaGGGTCATGGGACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPWGAGT*GHGTAP
Trigger: TGGGGCAGTCCCATGACCCCATGTCCCAGCTCCCCA...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCGCACCAATGCCTCTCTaGCCCAGCGCTGTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLAPMPL*PSAVWG
Trigger: TCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGC...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAGCACCAATGCCTCTCTaGCCCAGCGCTGTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPAPMPL*PSAVWG
Trigger: TCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGC...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGCTGCCCCCTTTCCGTTaGTGGCAGCCACCCTCCACA +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRLPPFR*WQPPST
Trigger: TGTGGAGGGTGGCTGCCATCAACGGAAAGGGGGCAG...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCCAGCACGGCCAAGGCTaGGCGCAGAGCCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: GPGARLTGLLGKAVELRLQHGQG*AQSPHF
Trigger: GAAATGGGGGCTCTGCGCTCAGCCTTGGCCGTGCTG...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGACCGAGACCACCAGCTaGAGCAGTGTCCAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMTETTS*SSVQSR
Trigger: GCGGGACTGGACACTGCTGCAGCTGGTGGTCTCGGT...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCCAGGGTGTCCTGCACTaGCCCCTTTCCGTTGATGGC +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLQGVLH*PLSVDG
Trigger: GCCATCAACGGAAAGGGGGCAGTGCAGGACACCCTG...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGCAGGAGGCTGGCCCATaGTCAGCTCCTCCCGCATGG +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGQEAGP*SAPPAW
Trigger: CCATGCGGGAGGAGCTGAGCATGGGCCAGCCTCCTG...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCCAGAATGCAGAGCCCTaGCAGCAACAGGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLQNAEP*QQQGCG
Trigger: GCCGCATCCCTGTTGCTGGCAGGGCTCTGCATTCTG...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCACAGAATGCAGAGCCCTaGCAGCAACAGGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPQNAEP*QQQGCG
Trigger: GCCGCATCCCTGTTGCTGGCAGGGCTCTGCATTCTG...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGGCCCAAGCCCACTaGCGTCATCCTGAGCACAGT +
Preference number: 4 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPLAQAH*RHPEHS
Trigger: ACTGTGCTCAGGATGACGGCAGTGGGCTTGGGCCAG...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCCCTCCCCAAATCTATaGCTCCTGCAGAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPPSPNL*LLQSPT
Trigger: GGTGGGGCTCTGCAGGAGGCATAGATTTGGGGAGGG...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377567.6
CDS-3UTR CCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCCTGCTGGTGTCACTTaGGGTGGCTCCAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLPAGVT*GGSNWA
Trigger: GGCCCAGTTGGAGCCACCCCAAGTGACACCAGCAGG...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCAGGCCACTCAGCACTaGCACCGTCCCATACACCAG +
Preference number: 4 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPQATQH*HRPIHQ
Trigger: CTGGTGTATGGGACGGTGCCAGTGCTGAGTGGCCTG...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCGCAGGTGGACGGGTGTaGGGGGACAAGTGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GPGARLTGLLGKAVELRLAGGRV*GDKWQC
Trigger: GCACTGCCACTTGTCCCCCCACACCCGTCCACCTGC...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGGCAGGTGGACGGGTGTaGGGGGACAAGTGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGAGGRV*GDKWQC
Trigger: GCACTGCCACTTGTCCCCCCACACCCGTCCACCTGC...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCTGGGACATGGGGTCATaGGACTGCCCCAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLWDMGS*DCPNPL
Trigger: CAGAGGGTTGGGGCAGTCCCATGACCCCATGTCCCA...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGTGGGGAGCTGGGACATaGGGTCATGGGACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRWGAGT*GHGTAP
Trigger: TGGGGCAGTCCCATGACCCCATGTCCCAGCTCCCCA...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAGCCCACCTCCCAGAGTaGCTGAGCCAAGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPAHLPE*LSQEKV
Trigger: CACCTTCTCTTGGCTCAGCCACTCTGGGAGGTGGGC...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR CCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGGCAGCCTCCTCTGCTTaGGGGCCAGGGCCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEAASSA*GPGPAC
Trigger: GCAGGCCGGCCCTGGCCCCCAAGCAGAGGAGGCTGC...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR TCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGCTCCTCCCGCATGGCTaGAAGCAAGACCTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRLLPHG*KQDLRG
Trigger: ACCCCTGAGGTCTTGCTTTCAGCCATGCGGGAGGAG...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGCCAGGCCGAAGAAGGTaGAGCCAAAGGCGAACCAGC +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRPGRRR*SQRRTS
Trigger: GCTGGTTCGCCTTTGGCTTCACCTTCTTCGGCCTGG...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGCCAGGCCGAAGAAGGTaGAGCCAAAGGCGAACCAGC +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMPGRRR*SQRRTS
Trigger: GCTGGTTCGCCTTTGGCTTCACCTTCTTCGGCCTGG...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGCCACTGCCGTCATCCTaGGCACAGTGGGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMPLPSS*AQWGRA
Trigger: AGCTCTTCCCCACTGTGCTCAGGATGACGGCAGTGG...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCAAGTTTAACCCGCGTTaGGGCAGGCACAGACGCGAG +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLKFNPR*GRHRRE
Trigger: CTCGCGTCTGTGCCTGCCTCAACGCGGGTTAAACTT...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR GCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCACTCTGGTCATCTGCCTaGTGGTGTCACTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPLWSSA*WCHLGW
Trigger: CCACCCCAAGTGACACCAGCAGGCAGATGACCAGAG...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCTCAAGCTCCCTAGGATaGTGGCCTGAGCCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLSSSLG*WPEPCC
Trigger: ACAGCACGGCTCAGGCCAGCATCCTAGGGAGCTTGA...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCCCATCGTGCCGACTCTaGCAGCCACCAGGAGTACAA +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLPSCRL*QPPGVQ
Trigger: TTGTACTCCTGGTGGCTGGCAGAGTCGGCACGATGG...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGGGTGAGGAGCCATCGTaGCGACTCTGCCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGGEEPS*RLCQPP
Trigger: TGGTGGCTGGCAGAGTCGGCACGATGGCTCCTCACC...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCAGGGTGTCCTGCACTaGCCCCTTTCCGTTGATGGC +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLQGVLH*PLSVDG
Trigger: GCCATCAACGGAAAGGGGGCAGTGCAGGACACCCTG...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCGGGGTCAGGGTGTCCTaGACTGCCCCCTTTCCGTTG +
Preference number: 4 (lower is better)
Translates to: GPGARLTGLLGKAVELRLGVRVS*TAPFPL
Trigger: CAACGGAAAGGGGGCAGTGCAGGACACCCTGACCCC...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGGGGGTCAGGGTGTCCTaGACTGCCCCCTTTCCGTTG +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGGVRVS*TAPFPL
Trigger: CAACGGAAAGGGGGCAGTGCAGGACACCCTGACCCC...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGGCAGGAAGATGTTGCTaGCCAGGGCCTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLAGRCC*PGPAGP
Trigger: TGGACCTGCAGGCCCTGGGCAGCAACATCTTCCTGC...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGGGAGCAGGAAGATGTTaGTGCCCAGGGCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLGAGRC*CPGPAG
Trigger: ACCTGCAGGCCCTGGGCAGCAACATCTTCCTGCTCC...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTGCGTGTTGGCCAGAATaGAGAGCCCTGCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPACWPE*RALPAT
Trigger: TGTTGCTGGCAGGGCTCTGCATTCTGGCCAACACGC...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTGGCCCAAGCCCACTaGCGTCATCCTGAGCACAGT +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLLAQAH*RHPEHS
Trigger: ACTGTGCTCAGGATGACGGCAGTGGGCTTGGGCCAG...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGCTCCTCCACGGGCTaGCATCTGGCCCAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELGSSTG*HLAQAH
Trigger: GTGGGCTTGGGCCAGATGGCAGCCCGTGGAGGAGCC...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGAATCCCTCGCACCAATaGCTCTCTGGCCCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMNPSHQ*LSGPAL
Trigger: CAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATT...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGAGGTGCAGCCTCCTCTaGTTGGGGGCCAGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGERCSLL*LGARAG
Trigger: GCCGGCCCTGGCCCCCAAGCAGAGGAGGCTGCACCT...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR CCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGTGGTGTCACTTGGGGTaGCTCCAACTGGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMWCHLG*LQLGPE
Trigger: CTCAGGGCCCAGTTGGAGCCACCCCAAGTGACACCA...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTGAGGCTCAGGCTCTCTaGTCATCTGCCTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPEAQAL*SSACWC
Trigger: ACACCAGCAGGCAGATGACCAGAGAGCCTGAGCCTC...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCACCACTTCACAAAGGCTaGCCCAGGGCAAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPPLHKG*PRAKRP
Trigger: TGGCCTCTTTGCCCTGGGCCAGCCTTTGTGAAGTGG...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCCCAGCAGCGGTGGCTaGGCACGGCGGCCGAGAAGT +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEPSSGG*ARRPRS
Trigger: ACTTCTCGGCCGCCGTGCCCAGCCACCGCTGCTGGG...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTCCCAGCAGCGGTGGCTaGGCACGGCGGCCGAGAAGT +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFPSSGG*ARRPRS
Trigger: ACTTCTCGGCCGCCGTGCCCAGCCACCGCTGCTGGG...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTAGCTCCCTAGGATGCTaGCCTGAGCCGTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPSSLGC*PEPCCC
Trigger: ACAACAGCACGGCTCAGGCCAGCATCCTAGGGAGCT...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTGCAGGGTGCCCAGGCTaGCAGGAGGCTGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFAGCPG*QEAGPC
Trigger: GCATGGGCCAGCCTCCTGCCAGCCTGGGCACCCTGC...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAGGCGCCCATCTTGGCTaGGATGTCCACGACACCAAT +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPGAHLG*DVHDTN
Trigger: ATTGGTGTCGTGGACATCCCAGCCAAGATGGGCGCC...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGGCAGGGCGCCCATCTTaGCTGGGATGTCCACGACAC +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGAGRPS*LGCPRH
Trigger: GTGTCGTGGACATCCCAGCCAAGATGGGCGCCCTGC...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCGGGGCACCAGCGTGTTaGCCAGAATGCAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GPGARLTGLLGKAVELRLGAPAC*PECRAL
Trigger: CAGGGCTCTGCATTCTGGCCAACACGCTGGTGCCCC...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGAGAGCCCCCATTTCGTaGGGCACCAGCGTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGRAPIS*GTSVLA
Trigger: GGCCAACACGCTGGTGCCCCACGAAATGGGGGCTCT...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCAGGCCACTCAGCACTaGCACCGTCCCATACACCAG +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLQATQH*HRPIHQ
Trigger: CTGGTGTATGGGACGGTGCCAGTGCTGAGTGGCCTG...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCTGGTTCTGCACATCTTaGATGGTGTCGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLWFCTS*MVSGSG
Trigger: GCCGCTGCCCGACACCATCCAAGATGTGCAGAACCA...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGTGGGACATGGGGTCATaGGACTGCCCCAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLWDMGS*DCPNPL
Trigger: CAGAGGGTTGGGGCAGTCCCATGACCCCATGTCCCA...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGGTCTCTGTGTGGGCTTaGGTCACTGGCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLVSVWA*VTGSCP
Trigger: TGGGCAGCTGCCAGTGACCCAAGCCCACACAGAGAC...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR TCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTGGCCCTGAGGCCGCGTaGGGTGATTCCGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFGPEAA*GDSETS
Trigger: GGAGGTCTCGGAATCACCTCACGCGGCCTCAGGGCC...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGGGCCCTGAGGCCGCGTaGGGTGATTCCGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEGPEAA*GDSETS
Trigger: GGAGGTCTCGGAATCACCTCACGCGGCCTCAGGGCC...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAGGGTACACAGCCACATaGTGGAGACCATCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPGYTAT*WRPSEP
Trigger: TGGCTCTGATGGTCTCCATCATGTGGCTGTGTACCC...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR TCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGCCAGGCCGAAGAAGGTaGAGCCAAAGGCGAACCAGC +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGPGRRR*SQRRTS
Trigger: GCTGGTTCGCCTTTGGCTTCACCTTCTTCGGCCTGG...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGCAGCACGGCCAAGGCTaGGCGCAGAGCCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELQHGQG*AQSPHF
Trigger: GAAATGGGGGCTCTGCGCTCAGCCTTGGCCGTGCTG...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGCCACTGCCGTCATCCTaGGCACAGTGGGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGPLPSS*AQWGRA
Trigger: AGCTCTTCCCCACTGTGCTCAGGATGACGGCAGTGG...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTGGGCCCCTTGGACTGTaGGAGGGGCAGGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFGPLGL*EGQGSP
Trigger: AGGTGAGCCCTGCCCCTCTCACAGTCCAAGGGGCCC...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCTGCCCGTGTTCATCATaGCGCCTGCCACGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GPGARLTGLLGKAVELRLCPCSS*RLPRQR
Trigger: CCTTTGCCGTGGCAGGCGTCATGATGAACACGGGCA...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377574.6
CDS-3UTR GCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGGGCTCTCTGGTCATCTaGCTGCTGGTGTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLGSLVI*LLVSLG
Trigger: CCCAAGTGACACCAGCAGGCAGATGACCAGAGAGCC...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGGGCTCTCTGGTCATCTaGCTGCTGGTGTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRGSLVI*LLVSLG
Trigger: CCCAAGTGACACCAGCAGGCAGATGACCAGAGAGCC...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGGTGGTTGGCGTCCTGTaGCCGCTTTGCTGTTACCCT +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMVVGVL*PLCCYP
Trigger: AGGGTAACAGCAAAGCGGGCACAGGACGCCAACCAC...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377567.6
CDS-3UTR GCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGAGGGGCGAAGGCAGCTaGCGTACCCATCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGRGEGS*RTHHSH
Trigger: ATGGCTGTGATGGGTACGGCAGCTGCCTTCGCCCCT...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377574.6
CDS-3UTR GCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAGTTCATCATGACGCCTaGCACGGCAAAGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPVHHDA*HGKGQQ
Trigger: CTGTTGGCCTTTGCCGTGGCAGGCGTCATGATGAAC...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377574.6
CDS-3UTR CCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGTGGTCATCTGCCTGCTaGTGTCACTTGGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRWSSAC*CHLGWL
Trigger: GAGCCACCCCAAGTGACACCAGCAGGCAGATGACCA...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGTGGTCATCTGCCTGCTaGTGTCACTTGGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMWSSAC*CHLGWL
Trigger: GAGCCACCCCAAGTGACACCAGCAGGCAGATGACCA...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTCGGTGGTGCCCACAGTaGCTTCTCCAGCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFRWCPQ*LLQPSG
Trigger: GCCGCTGGGCTGGAGAAGCCACTGTGGGCACCACCG...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGAGCTCCCTAGGATGCTaGCCTGAGCCGTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMSSLGC*PEPCCC
Trigger: ACAACAGCACGGCTCAGGCCAGCATCCTAGGGAGCT...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGGCAGGGTGCCCAGGCTaGCAGGAGGCTGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEAGCPG*QEAGPC
Trigger: GCATGGGCCAGCCTCCTGCCAGCCTGGGCACCCTGC...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCCGAACCAGCACAACGTaGAGATACAGGTCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLRTSTT*RYRSGS
Trigger: GCTTCCGGACCTGTATCTCCACGTTGTGCTGGTTCG...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCCACGGGCTGCCATCTaGCCCAAGCCCACTGCCGTC +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEPRAAI*PKPTAV
Trigger: GACGGCAGTGGGCTTGGGCCAGATGGCAGCCCGTGG...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGTCTGCACATCTTGGATaGTGTCGGGCAGCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLSAHLG*CRAAAS
Trigger: GCTTGCCGCTGCCCGACACCATCCAAGATGTGCAGA...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCAGGGTGATGGTGCACTaGGTCACCTCCTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLRVMVH*VTSCQS
Trigger: TGATTGGCAGGAGGTGACCCAGTGCACCATCACCCT...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCGTTAGCTCTGAGCTCTaGGCAGGTGGACGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GPGARLTGLLGKAVELRLVSSEL*AGGRVW
Trigger: CCACACCCGTCCACCTGCCCAGAGCTCAGAGCTAAC...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGGTTAGCTCTGAGCTCTaGGCAGGTGGACGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGVSSEL*AGGRVW
Trigger: CCACACCCGTCCACCTGCCCAGAGCTCAGAGCTAAC...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGACGGGCATCTCAGGCTaGCCCTGGACCCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELTGISG*PWTPGR
Trigger: CCTTCCAGGGGTCCAGGGCCAGCCTGAGATGCCCGT...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGGTGCAAGTCTCTGTGTaGGCTTGGGTCACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRVQVSV*AWVTGS
Trigger: GCTGCCAGTGACCCAAGCCCACACAGAGACTTGCAC...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR TCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCAGCACGGCCAAGGCTaGGCGCAGAGCCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEQHGQG*AQSPHF
Trigger: GAAATGGGGGCTCTGCGCTCAGCCTTGGCCGTGCTG...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTGAGGGCAGGGCAGGGTaGTGGTGCACTGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFEGRAG*WCTGSP
Trigger: AGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTC...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGCTCTGGTCATCTGCCTaGTGGTGTCACTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGLWSSA*WCHLGW
Trigger: CCACCCCAAGTGACACCAGCAGGCAGATGACCAGAG...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGAGAACCTGGAACCTaGCCAGGCCACCCACGAGGT +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELGEPGT*PGHPRG
Trigger: ACCTCGTGGGTGGCCTGGGCAGGTTCCAGGTTCTCC...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR GCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGTGCTGGCCTGAGCCGTaGTGTTGTCCAGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELCWPEP*CCPGGV
Trigger: CACCCCTCCTGGACAACAGCACGGCTCAGGCCAGCA...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGTCAAGCTCCCTAGGATaGTGGCCTGAGCCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGSSSLG*WPEPCC
Trigger: ACAGCACGGCTCAGGCCAGCATCCTAGGGAGCTTGA...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGCACACCGTAGGCCACTaGAGCTGTCAGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELHTVGH*SCQAMA
Trigger: GGCCATGGCCTGACAGCTGCAGTGGCCTACGGTGTG...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGTGAGGAGCCATCGTaGCGACTCTGCCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELGEEPS*RLCQPP
Trigger: TGGTGGCTGGCAGAGTCGGCACGATGGCTCCTCACC...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGGGTCAGGGTGTCCTaGACTGCCCCCTTTCCGTTG +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELGVRVS*TAPFPL
Trigger: CAACGGAAAGGGGGCAGTGCAGGACACCCTGACCCC...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTCAGGAGGCTGGCCCATaGTCAGCTCCTCCCGCATGG +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFQEAGP*SAPPAW
Trigger: CCATGCGGGAGGAGCTGAGCATGGGCCAGCCTCCTG...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGTGCCAGCAACAGGGATaGGGCCAGCGTGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWCQQQG*GQRGAA
Trigger: CGCCGCCCCACGCTGGCCGCATCCCTGTTGCTGGCA...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTCGGGCAGAAGCAGTaGGGCCAGGCCACTCAGCAC +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGELGQKQ*GQATQH
Trigger: GTGCTGAGTGGCCTGGCCGCACTGCTTCTGCCCGAG...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGGTTCGGTGTGCCCAATaGCACCCTGAGATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRVRCAQ*HPEISV
Trigger: GACAGAGATCTCAGGGTGGCATTGGGCACACCGAAC...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377567.6
CDS-3UTR CCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGTCAGCTCCTCCCGCATaGCTGAAAGCAAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRSAPPA*LKARPQ
Trigger: CTGAGGTCTTGCTTTCAGCCATGCGGGAGGAGCTGA...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTAGGCTGGCAGGAGGCTaGCCCATGCTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFRLAGG*PMLSSS
Trigger: GGAGGAGCTGAGCATGGGCCAGCCTCCTGCCAGCCT...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCGGCGCCCATCTTGGCTaGGATGTCCACGACACCAAT +
Preference number: 4 (lower is better)
Translates to: GPGARLTGLLGKAVELRLGAHLG*DVHDTN
Trigger: ATTGGTGTCGTGGACATCCCAGCCAAGATGGGCGCC...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGGGCACCAGCGTGTTaGCCAGAATGCAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELGAPAC*PECRAL
Trigger: CAGGGCTCTGCATTCTGGCCAACACGCTGGTGCCCC...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGCAGCGGCAAGCTCTaGGTCTCGGGCAGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELGSGKL*VSGRSS
Trigger: ACTGCTTCTGCCCGAGACCCAGAGCTTGCCGCTGCC...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCCGGGAAAGCTGCTGTaGTTGGCGTCCTGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEPGKLL*LASCAR
Trigger: GCGGGCACAGGACGCCAACCACAGCAGCTTTCCCGG...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377567.6
CDS-3UTR CCA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGGGCCTCTGGAAATaGAGGTCTTTGCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPLGLWK*RSLLSS
Trigger: GGAGGAAAGCAAAGACCTCCATTTCCAGAGGCCCAG...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCCAGCCTCTGGGCCTCTaGAAATGGAGGTCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLQPLGL*KWRSLL
Trigger: AAGCAAAGACCTCCATTTCCAGAGGCCCAGAGGCTG...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGAGCCCTGGGGGAGAGTaGGGACCTCAGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQSPGGE*GPQRAA
Trigger: GGCTGCCCTCTGAGGTCCCCACTCTCCCCCAGGGCT...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGGCAGGTGGACGGGTGTaGGGGGACAAGTGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEAGGRV*GDKWQC
Trigger: GCACTGCCACTTGTCCCCCCACACCCGTCCACCTGC...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGGGTTTGGGGGTTAAGTaGAGTCGGTCAGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRGLGVK*SRSGMR
Trigger: CCTCATCCCTGACCGACTCCACTTAACCCCCAAACC...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGACGGGCATCTCAGGCTaGCCCTGGACCCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGETGISG*PWTPGR
Trigger: CCTTCCAGGGGTCCAGGGCCAGCCTGAGATGCCCGT...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGATGGGCTTCAGAGCATaGGAGTCACACACGAGGTTC +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMMGFRA*ESHTRF
Trigger: GAACCTCGTGTGTGACTCTCATGCTCTGAAGCCCAT...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGATGGGCTTCAGAGCATaGGAGTCACACACGAGGTTC +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRMGFRA*ESHTRF
Trigger: GAACCTCGTGTGTGACTCTCATGCTCTGAAGCCCAT...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGCCAGCCTGCCTGTGGTaGGGAGCCATCGTGCCGACT +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEPACLW*GAIVPT
Trigger: AGTCGGCACGATGGCTCCTCACCACAGGCAGGCTGG...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTCTGCCCCCTTTCCGTTaGTGGCAGCCACCCTCCACA +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFLPPFR*WQPPST
Trigger: TGTGGAGGGTGGCTGCCATCAACGGAAAGGGGGCAG...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGCCAGGCCGAAGAAGGTaGAGCCAAAGGCGAACCAGC +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELPGRRR*SQRRTS
Trigger: GCTGGTTCGCCTTTGGCTTCACCTTCTTCGGCCTGG...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGCAGCACGGCCAAGGCTaGGCGCAGAGCCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEQHGQG*AQSPHF
Trigger: GAAATGGGGGCTCTGCGCTCAGCCTTGGCCGTGCTG...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGTGCCCAATGCCACCCTaGGATCTCTGTCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGECPMPP*DLCPLP
Trigger: GGGGAGGGGACAGAGATCTCAGGGTGGCATTGGGCA...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377567.6
CDS-3UTR TCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGGGGCCCCTTGGACTGTaGGAGGGGCAGGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWGPLGL*EGQGSP
Trigger: AGGTGAGCCCTGCCCCTCTCACAGTCCAAGGGGCCC...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCCCCAGAGAGGCAGCTaGTCCAGACCTCCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEPQRGS*SRPPGK
Trigger: TTTCCCGGGAGGTCTGGAGCAGCTGCCTCTCTGGGG...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGGGAGAACCTGGAACCTaGCCAGGCCACCCACGAGGT +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEGEPGT*PGHPRG
Trigger: ACCTCGTGGGTGGCCTGGGCAGGTTCCAGGTTCTCC...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR GCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTATTGCTGCCCAGGGCCTaGAGGTCCAGGGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVLLPRA*RSRARP
Trigger: CGGCCTGGCCCTGGACCTGCAGGCCCTGGGCAGCAA...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGCAGGAAGATGTTGCTaGCCAGGGCCTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELAGRCC*PGPAGP
Trigger: TGGACCTGCAGGCCCTGGGCAGCAACATCTTCCTGC...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTATGCCAGCAACAGGGATaGGGCCAGCGTGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVCQQQG*GQRGAA
Trigger: CGCCGCCCCACGCTGGCCGCATCCCTGTTGCTGGCA...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGGGCTCCTCCACGGGCTaGCATCTGGCCCAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQGSSTG*HLAQAH
Trigger: GTGGGCTTGGGCCAGATGGCAGCCCGTGGAGGAGCC...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCACAGCGTGCCATGTGTTaGCTTCTTTACTGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPQRAMC*LLYCLV
Trigger: AACCAGGCAGTAAAGAAGGCAACACATGGCACGCTG...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGCAAATCTATGCCTCCTaGAGAGCCCCACCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRQIYAS*RAPPQL
Trigger: TAGCTGAGGTGGGGCTCTGCAGGAGGCATAGATTTG...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377567.6
CDS-3UTR GCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAAGAAGTTCTCCAGCATaGTTCAAGGGGCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPRSSPA*FKGPRR
Trigger: TCTTCTGGGCCCCTTGAAGCATGCTGGAGAACTTCT...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473690.5
CDS-3UTR CCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTGGGGTGGCTCCAACTaGGCCCTGAGGCCGCGTGAG +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQWGGSN*ALRPRE
Trigger: CTCACGCGGCCTCAGGGCCCAGTTGGAGCCACCCCA...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTCCTGCTGGTGTCACTTaGGGTGGCTCCAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFPAGVT*GGSNWA
Trigger: GGCCCAGTTGGAGCCACCCCAAGTGACACCAGCAGG...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGCTGTTTCCCCCACGGTaGTGCCCACAGTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELLFPPR*CPQWLL
Trigger: GAGAAGCCACTGTGGGCACCACCGTGGGGGAAACAG...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGATCAGAGCCATCGTCTaGAGAACCTGGAACCTGCCC +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGIRAIV*RTWNLP
Trigger: GGGCAGGTTCCAGGTTCTCCAGACGATGGCTCTGAT...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR CCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTACCCAGCAGCGGTGGCTaGGCACGGCGGCCGAGAAGT +
Preference number: 4 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVPSSGG*ARRPRS
Trigger: ACTTCTCGGCCGCCGTGCCCAGCCACCGCTGCTGGG...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGAGGCTGGCAGGAGGCTaGCCCATGCTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQRLAGG*PMLSSS
Trigger: GGAGGAGCTGAGCATGGGCCAGCCTCCTGCCAGCCT...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTGCAGGGCGCCCATCTTaGCTGGGATGTCCACGACAC +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFAGRPS*LGCPRH
Trigger: GTGTCGTGGACATCCCAGCCAAGATGGGCGCCCTGC...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGCCACGGGCTGCCATCTaGCCCAAGCCCACTGCCGTC +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQPRAAI*PKPTAV
Trigger: GACGGCAGTGGGCTTGGGCCAGATGGCAGCCCGTGG...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTGGCAGCGGCAAGCTCTaGGTCTCGGGCAGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFGSGKL*VSGRSS
Trigger: ACTGCTTCTGCCCGAGACCCAGAGCTTGCCGCTGCC...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGGTCCTGAGTCCTCGGTaGAGCTTCCCAGCATCAACA +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGVLSPR*SFPAST
Trigger: TGTTGATGCTGGGAAGCTCCACCGAGGACTCAGGAC...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377567.6
CDS-3UTR CCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCGGTCTTGACCATGGATaGTGGTTAGCTCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLGLDHG*WLALSS
Trigger: AGAGCTCAGAGCTAACCACCATCCATGGTCAAGACC...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGGATGTGGCGGGCAGGTaGCTGAGGCCTGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEDVAGR*LRPGGT
Trigger: TGTCCCTCCAGGCCTCAGCCACCTGCCCGCCACATC...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCGGTTTGGGGGTTAAGTaGAGTCGGTCAGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: GPGARLTGLLGKAVELRLGLGVK*SRSGMR
Trigger: CCTCATCCCTGACCGACTCCACTTAACCCCCAAACC...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGACGGGCATCTCAGGCTaGCCCTGGACCCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQETGISG*PWTPGR
Trigger: CCTTCCAGGGGTCCAGGGCCAGCCTGAGATGCCCGT...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGTGGGACATGGGGTCATaGGACTGCCCCAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELWDMGS*DCPNPL
Trigger: CAGAGGGTTGGGGCAGTCCCATGACCCCATGTCCCA...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCACTCTGTGCCAGGTCTTaGGGAGGCCTAAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPLCARS*GGLSFS
Trigger: AGAAAAACTTAGGCCTCCCCAAGACCTGGCACAGAG...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR TCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGCTGCCCCCTTTCCGTTaGTGGCAGCCACCCTCCACA +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQELPPFR*WQPPST
Trigger: TGTGGAGGGTGGCTGCCATCAACGGAAAGGGGGCAG...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTCTCCTCCCGCATGGCTaGAAGCAAGACCTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFLLPHG*KQDLRG
Trigger: ACCCCTGAGGTCTTGCTTTCAGCCATGCGGGAGGAG...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCATGTCCACGACACCAATaGACATTTGGAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPCPRHQ*TFGAGR
Trigger: TCTTCCTGCTCCAAATGTTCATTGGTGTCGTGGACA...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTCCACTGCCGTCATCCTaGGCACAGTGGGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFPLPSS*AQWGRA
Trigger: AGCTCTTCCCCACTGTGCTCAGGATGACGGCAGTGG...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGGAGGGCAGGGCAGGGTaGTGGTGCACTGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQEGRAG*WCTGSP
Trigger: AGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTC...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGGTAAAGCTGTGGAGCTaGGACTCTACTGCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLVKLWS*DSTACV
Trigger: CACACAAGCAGTAGAGTCTCAGCTCCACAGCTTTAC...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGCACTCCATCACTGTCTaGGGCAGGGCCGCACGCAGC +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQHSITV*GRAARS
Trigger: GCTGCGTGCGGCCCTGCCTCAGACAGTGATGGAGTG...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473690.5
CDS-3UTR GCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGTTTCCCCCACGGTGGTaGCCACAGTGGCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEFPPRW*PQWLLQ
Trigger: CTGGAGAAGCCACTGTGGGCACCACCGTGGGGGAAA...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGTGCTGGCCTGAGCCGTaGTGTTGTCCAGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQECWPEP*CCPGGV
Trigger: CACCCCTCCTGGACAACAGCACGGCTCAGGCCAGCA...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGACCGAGACCACCAGCTaGAGCAGTGTCCAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQETETTS*SSVQSR
Trigger: GCGGGACTGGACACTGCTGCAGCTGGTGGTCTCGGT...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTGCAGGAAGATGTTGCTaGCCAGGGCCTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFAGRCC*PGPAGP
Trigger: TGGACCTGCAGGCCCTGGGCAGCAACATCTTCCTGC...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCAGAATGCAGAGCCCTaGCAGCAACAGGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEQNAEP*QQQGCG
Trigger: GCCGCATCCCTGTTGCTGGCAGGGCTCTGCATTCTG...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTCAGAATGCAGAGCCCTaGCAGCAACAGGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFQNAEP*QQQGCG
Trigger: GCCGCATCCCTGTTGCTGGCAGGGCTCTGCATTCTG...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGCGTGTTGGCCAGAATaGAGAGCCCTGCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELACWPE*RALPAT
Trigger: TGTTGCTGGCAGGGCTCTGCATTCTGGCCAACACGC...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTTTTACTGCCTGGTTCTaGACATCTTGGATGGTGTCG +
Preference number: 4 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPFTAWF*TSWMVS
Trigger: CGACACCATCCAAGATGTGCAGAACCAGGCAGTAAA...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGCAGAGTTCCCCAGCGTaGCATGTGTTGCCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMQSSPA*HVLPSL
Trigger: TAAAGAAGGCAACACATGGCACGCTGGGGAACTCTG...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCACACTGGGTCACCTCCTaGCAATCAAACTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPHWVTS*QSNCPF
Trigger: AAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTG...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTAATCCCTCGCACCAATaGCTCTCTGGCCCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFNPSHQ*LSGPAL
Trigger: CAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATT...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGAATCCCTCGCACCAATaGCTCTCTGGCCCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGENPSHQ*LSGPAL
Trigger: CAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATT...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGCCTGCTGGTGTCACTTaGGGTGGCTCCAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQPAGVT*GGSNWA
Trigger: GGCCCAGTTGGAGCCACCCCAAGTGACACCAGCAGG...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGAGGCTCAGGCTCTCTaGTCATCTGCCTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELEAQAL*SSACWC
Trigger: ACACCAGCAGGCAGATGACCAGAGAGCCTGAGCCTC...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGTTTCCCCCACGGTaGTGCCCACAGTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGELFPPR*CPQWLL
Trigger: GAGAAGCCACTGTGGGCACCACCGTGGGGGAAACAG...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGGTTCAGAAAATGCCATaGAACCTACTCAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLVQKMP*NLLKGP
Trigger: GGGCCCCTTGAGTAGGTTCCATGGCATTTTCTGAAC...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR CCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGGTTCAGAAAATGCCATaGAACCTACTCAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRVQKMP*NLLKGP
Trigger: GGGCCCCTTGAGTAGGTTCCATGGCATTTTCTGAAC...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR CCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGCGCCCATCTTGGCTaGGATGTCCACGACACCAAT +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELGAHLG*DVHDTN
Trigger: ATTGGTGTCGTGGACATCCCAGCCAAGATGGGCGCC...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGCAGGGCGCCCATCTTaGCTGGGATGTCCACGACAC +
Preference number: 4 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQAGRPS*LGCPRH
Trigger: GTGTCGTGGACATCCCAGCCAAGATGGGCGCCCTGC...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGGGGGCACCAGCGTGTTaGCCAGAATGCAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEGAPAC*PECRAL
Trigger: CAGGGCTCTGCATTCTGGCCAACACGCTGGTGCCCC...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTACCAGAGGCCCCAGGATaGCTCCTCCACGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVPEAPG*LLHGLP
Trigger: TGGCAGCCCGTGGAGGAGCCATCCTGGGGCCTCTGG...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGGGCAGCGGCAAGCTCTaGGTCTCGGGCAGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEGSGKL*VSGRSS
Trigger: ACTGCTTCTGCCCGAGACCCAGAGCTTGCCGCTGCC...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCGCCTTCTTTACTGCCTaGTTCTGCACATCTTGGATG +
Preference number: 4 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLAFFTA*FCTSWM
Trigger: CATCCAAGATGTGCAGAACCAGGCAGTAAAGAAGGC...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGAAAGCTGCTGTGGTTaGCGTCCTGTGCCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELESCCG*RPVPAL
Trigger: CAAAGCGGGCACAGGACGCCAACCACAGCAGCTTTC...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377567.6
CDS-3UTR CCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCCTGGGCCTCTGGAAATaGAGGTCTTTGCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GPGARLTGLLGKAVELRLLGLWK*RSLLSS
Trigger: GGAGGAAAGCAAAGACCTCCATTTCCAGAGGCCCAG...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGGCAGGTGGACGGGTGTaGGGGGACAAGTGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWAGGRV*GDKWQC
Trigger: GCACTGCCACTTGTCCCCCCACACCCGTCCACCTGC...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGTGGGGAGCTGGGACATaGGGTCATGGGACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEWGAGT*GHGTAP
Trigger: TGGGGCAGTCCCATGACCCCATGTCCCAGCTCCCCA...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGCTGCCCCCTTTCCGTTaGTGGCAGCCACCCTCCACA +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQLPPFR*WQPPST
Trigger: TGTGGAGGGTGGCTGCCATCAACGGAAAGGGGGCAG...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGCTCCTCCCGCATGGCTaGAAGCAAGACCTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQLLPHG*KQDLRG
Trigger: ACCCCTGAGGTCTTGCTTTCAGCCATGCGGGAGGAG...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGCCACTGCCGTCATCCTaGGCACAGTGGGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEPLPSS*AQWGRA
Trigger: AGCTCTTCCCCACTGTGCTCAGGATGACGGCAGTGG...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGGCTGTTACCCTGTCCTaGGTCCTCGGTGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEAVTLS*VLGGAS
Trigger: GGAAGCTCCACCGAGGACTCAGGACAGGGTAACAGC...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377567.6
CDS-3UTR TCA 90 bp GGGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGTGCCAGCCACCTGTCTaGGGCAGGGCCGCACGCAGC +
Preference number: 4 (lower is better)
Translates to: GQPFICFFIQSLAPMPLWCQPPV*GRAARS
Trigger: GCTGCGTGCGGCCCTGCCTCAGACAGGTGGCTGGCA...CCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR TCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGACCTCCCGGGAAAGCTaGATTTGGAAAGTAGGGAAT +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLTSRES*IWKVGN
Trigger: ATTCCCTACTTTCCAAATTCAGCTTTCCCGGGAGGT...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGCCCCAGAGAGGCAGCTaGTCCAGACCTCCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWPQRGS*SRPPGK
Trigger: TTTCCCGGGAGGTCTGGAGCAGCTGCCTCTCTGGGG...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGCCCCAGAGAGGCAGCTaGTCCAGACCTCCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQPQRGS*SRPPGK
Trigger: TTTCCCGGGAGGTCTGGAGCAGCTGCCTCTCTGGGG...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGGGCTCTCTGGTCATCTaGCTGCTGGTGTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEGSLVI*LLVSLG
Trigger: CCCAAGTGACACCAGCAGGCAGATGACCAGAGAGCC...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGGGAGAACCTGGAACCTaGCCAGGCCACCCACGAGGT +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQGEPGT*PGHPRG
Trigger: ACCTCGTGGGTGGCCTGGGCAGGTTCCAGGTTCTCC...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR GCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTGCTGGCCTGAGCCGTaGTGTTGTCCAGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQCWPEP*CCPGGV
Trigger: CACCCCTCCTGGACAACAGCACGGCTCAGGCCAGCA...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGGAGCAGGAAGATGTTaGTGCCCAGGGCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQGAGRC*CPGPAG
Trigger: ACCTGCAGGCCCTGGGCAGCAACATCTTCCTGCTCC...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGGGAGCAGGAAGATGTTaGTGCCCAGGGCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEGAGRC*CPGPAG
Trigger: ACCTGCAGGCCCTGGGCAGCAACATCTTCCTGCTCC...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGCTGGCCCAAGCCCACTaGCGTCATCCTGAGCACAGT +
Preference number: 4 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQLAQAH*RHPEHS
Trigger: ACTGTGCTCAGGATGACGGCAGTGGGCTTGGGCCAG...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGTTTACTGCCTGGTTCTaGACATCTTGGATGGTGTCG +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLFTAWF*TSWMVS
Trigger: CGACACCATCCAAGATGTGCAGAACCAGGCAGTAAA...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCCAGCGTGCCATGTGTTaGCTTCTTTACTGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GPGARLTGLLGKAVELRLQRAMC*LLYCLV
Trigger: AACCAGGCAGTAAAGAAGGCAACACATGGCACGCTG...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCCAGAGTTCCCCAGCGTaGCATGTGTTGCCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: GPGARLTGLLGKAVELRLQSSPA*HVLPSL
Trigger: TAAAGAAGGCAACACATGGCACGCTGGGGAACTCTG...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGGGGCTGGGGCAGCTGTaGAAGTCTCTGTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEGLGQL*KSLCGL
Trigger: AAGCCCACACAGAGACTTGCACAGCTGCCCCAGCCC...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR GCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTTCGGTGCCCCTGTGTaGCCACCTCCCAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQFGAPV*PPPRVA
Trigger: AGCCACTCTGGGAGGTGGGCACACAGGGGCACCGAA...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR GCA 90 bp GGGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGGGGCCAGGGCCGGCCTaGTCTGTGCCAGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GQPFICFFIQSLAPMPLWGPGPA*SVPGLG
Trigger: CCCAAGACCTGGCACAGAGCAGGCCGGCCCTGGCCC...CCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR CCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGTGGTGTCACTTGGGGTaGCTCCAACTGGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEWCHLG*LQLGPE
Trigger: CTCAGGGCCCAGTTGGAGCCACCCCAAGTGACACCA...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTGAGGCTCAGGCTCTCTaGTCATCTGCCTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFEAQAL*SSACWC
Trigger: ACACCAGCAGGCAGATGACCAGAGAGCCTGAGCCTC...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGGAGGCTCAGGCTCTCTaGTCATCTGCCTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEEAQAL*SSACWC
Trigger: ACACCAGCAGGCAGATGACCAGAGAGCCTGAGCCTC...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTCCACTTCACAAAGGCTaGCCCAGGGCAAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFPLHKG*PRAKRP
Trigger: TGGCCTCTTTGCCCTGGGCCAGCCTTTGTGAAGTGG...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCGCAGGGTGCCCAGGCTaGCAGGAGGCTGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: GSHSFVSLFNPSHQCLSGAGCPG*QEAGPC
Trigger: GCATGGGCCAGCCTCCTGCCAGCCTGGGCACCCTGC...GCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR CCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGCGAACCAGCACAACGTaGAGATACAGGTCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELRTSTT*RYRSGS
Trigger: GCTTCCGGACCTGTATCTCCACGTTGTGCTGGTTCG...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGGCAGGGCGCCCATCTTaGCTGGGATGTCCACGACAC +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQAGRPS*LGCPRH
Trigger: GTGTCGTGGACATCCCAGCCAAGATGGGCGCCCTGC...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGAGAGCCCCCATTTCGTaGGGCACCAGCGTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWRAPIS*GTSVLA
Trigger: GGCCAACACGCTGGTGCCCCACGAAATGGGGGCTCT...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGCAGGCCACTCAGCACTaGCACCGTCCCATACACCAG +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEQATQH*HRPIHQ
Trigger: CTGGTGTATGGGACGGTGCCAGTGCTGAGTGGCCTG...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGGGTCTTGACCATGGATaGTGGTTAGCTCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGGLDHG*WLALSS
Trigger: AGAGCTCAGAGCTAACCACCATCCATGGTCAAGACC...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTAGATGTGGCGGGCAGGTaGCTGAGGCCTGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVDVAGR*LRPGGT
Trigger: TGTCCCTCCAGGCCTCAGCCACCTGCCCGCCACATC...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGTTTGGGGGTTAAGTaGAGTCGGTCAGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELGLGVK*SRSGMR
Trigger: CCTCATCCCTGACCGACTCCACTTAACCCCCAAACC...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTACCTAGGATGCTGGCCTaGGCCGTGCTGTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVPRMLA*AVLLSR
Trigger: CCTGGACAACAGCACGGCTCAGGCCAGCATCCTAGG...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGGGCCATGGCCGAAGCTaGAGCCCAGAGAGTTCAAGG +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWGHGRS*SPESSR
Trigger: CCTTGAACTCTCTGGGCTTCAGCTTCGGCCATGGCC...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTAGAAGTCTCTTCCTCTaGCCGTCCCATCGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFRSLFL*PSHRRF
Trigger: GAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCT...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGGGCTCTCTGGTCATCTaGCTGCTGGTGTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEGSLVI*LLVSLG
Trigger: CCCAAGTGACACCAGCAGGCAGATGACCAGAGAGCC...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGTTTCCCCCACGGTGGTaGCCACAGTGGCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWFPPRW*PQWLLQ
Trigger: CTGGAGAAGCCACTGTGGGCACCACCGTGGGGGAAA...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCAGGAGTTCAGAAAATaGCATGGAACCTACTCAAGG +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLQEFRK*HGTYSR
Trigger: CCTTGAGTAGGTTCCATGGCATTTTCTGAACTCCTG...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR GCA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGTCAAGCTCCCTAGGATaGTGGCCTGAGCCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQSSSLG*WPEPCC
Trigger: ACAGCACGGCTCAGGCCAGCATCCTAGGGAGCTTGA...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGTCAAGCTCCCTAGGATaGTGGCCTGAGCCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQESSSLG*WPEPCC
Trigger: ACAGCACGGCTCAGGCCAGCATCCTAGGGAGCTTGA...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTACACACCGTAGGCCACTaGAGCTGTCAGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVHTVGH*SCQAMA
Trigger: GGCCATGGCCTGACAGCTGCAGTGGCCTACGGTGTG...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGCAGGGTGTCCTGCACTaGCCCCTTTCCGTTGATGGC +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQQGVLH*PLSVDG
Trigger: GCCATCAACGGAAAGGGGGCAGTGCAGGACACCCTG...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGCAGGGTGTCCTGCACTaGCCCCTTTCCGTTGATGGC +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWQGVLH*PLSVDG
Trigger: GCCATCAACGGAAAGGGGGCAGTGCAGGACACCCTG...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGGGAGCAGGAAGATGTTaGTGCCCAGGGCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQGAGRC*CPGPAG
Trigger: ACCTGCAGGCCCTGGGCAGCAACATCTTCCTGCTCC...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGTGTTGCCTTCTTTACTaGCTGGTTCTGCACATCTTG +
Preference number: 4 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLCCLLY*LVLHIL
Trigger: CAAGATGTGCAGAACCAGGCAGTAAAGAAGGCAACA...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGGTCCTGTGCCCGCTTTaGTGTTACCCTGTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEVLCPL*CYPVLS
Trigger: ACTCAGGACAGGGTAACAGCAAAGCGGGCACAGGAC...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377567.6
CDS-3UTR GCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGAATCCCTCGCACCAATaGCTCTCTGGCCCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWNPSHQ*LSGPAL
Trigger: CAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATT...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GGGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGGGCCGGCCTGCTCTGTaGCAGGTCTTGGGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GQPFICFFIQSLAPMPLWGRPAL*QVLGRP
Trigger: AGGCCTCCCCAAGACCTGGCACAGAGCAGGCCGGCC...CCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR CCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGCTGTTTCCCCCACGGTaGTGCCCACAGTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQLFPPR*CPQWLL
Trigger: GAGAAGCCACTGTGGGCACCACCGTGGGGGAAACAG...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGAGCTCCCTAGGATGCTaGCCTGAGCCGTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQESSLGC*PEPCCC
Trigger: ACAACAGCACGGCTCAGGCCAGCATCCTAGGGAGCT...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGAGCTCCCTAGGATGCTaGCCTGAGCCGTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQSSLGC*PEPCCC
Trigger: ACAACAGCACGGCTCAGGCCAGCATCCTAGGGAGCT...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGGCAGCTGTCAGGCCATaGCCGAAGCTGAAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQAAVRP*PKLKPR
Trigger: TCTGGGCTTCAGCTTCGGCCATGGCCTGACAGCTGC...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGCAGGCCACTCAGCACTaGCACCGTCCCATACACCAG +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWQATQH*HRPIHQ
Trigger: CTGGTGTATGGGACGGTGCCAGTGCTGAGTGGCCTG...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGTGGTTCTGCACATCTTaGATGGTGTCGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEWFCTS*MVSGSG
Trigger: GCCGCTGCCCGACACCATCCAAGATGTGCAGAACCA...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAGAGGCTAAAACTGTGTaGATTTTAGGACAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: SEATRAGQGDGALGHLLPEAKTV*ILGQSS
Trigger: GGAACTCTGTCCTAAAATCCACACAGTTTTAGCCTC...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGGGTTTGGGGGTTAAGTaGAGTCGGTCAGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEGLGVK*SRSGMR
Trigger: CCTCATCCCTGACCGACTCCACTTAACCCCCAAACC...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCCTAAGTTTTTCTCCTaGCGGCTGTGGGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEPKFFS*RLWDAR
Trigger: CCTGGCATCCCACAGCCGCCAGGAGAAAAACTTAGG...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR TCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTAGGCCATGGCCGAAGCTaGAGCCCAGAGAGTTCAAGG +
Preference number: 4 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVGHGRS*SPESSR
Trigger: CCTTGAACTCTCTGGGCTTCAGCTTCGGCCATGGCC...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCCAGGAGTTCAGAAAATaGCATGGAACCTACTCAAGG +
Preference number: 4 (lower is better)
Translates to: GPGARLTGLLGKAVELRLQEFRK*HGTYSR
Trigger: CCTTGAGTAGGTTCCATGGCATTTTCTGAACTCCTG...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR GCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGCAGGAGTTCAGAAAATaGCATGGAACCTACTCAAGG +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGQEFRK*HGTYSR
Trigger: CCTTGAGTAGGTTCCATGGCATTTTCTGAACTCCTG...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR GCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGAGAAGTTCTCCAGCATaGTCTGGGTACACAGCCACA +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELRSSPA*SGYTAT
Trigger: TGTGGCTGTGTACCCAGAGCATGCTGGAGAACTTCT...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR GCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGGCGTGTTGGCCAGAATaGAGAGCCCTGCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWACWPE*RALPAT
Trigger: TGTTGCTGGCAGGGCTCTGCATTCTGGCCAACACGC...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGTGTTGCCTTCTTTACTaGCTGGTTCTGCACATCTTG +
Preference number: 4 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGCCLLY*LVLHIL
Trigger: CAAGATGTGCAGAACCAGGCAGTAAAGAAGGCAACA...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGCAGAGTTCCCCAGCGTaGCATGTGTTGCCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: LFNPSHQCLSGPALCGELQSSPA*HVLPSL
Trigger: TAAAGAAGGCAACACATGGCACGCTGGGGAACTCTG...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GGGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCAGACGCGAGGGAGGTaGAGCCTCCTCTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GQPFICFFIQSLAPMPLWQTRGR*SLLCLG
Trigger: CCCCAAGCAGAGGAGGCTGCACCTCCCTCGCGTCTG...CCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR CCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGTGGTCATCTGCCTGCTaGTGTCACTTGGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWWSSAC*CHLGWL
Trigger: GAGCCACCCCAAGTGACACCAGCAGGCAGATGACCA...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTGGTCATCTGCCTGCTaGTGTCACTTGGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQWSSAC*CHLGWL
Trigger: GAGCCACCCCAAGTGACACCAGCAGGCAGATGACCA...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGCCACTTCACAAAGGCTaGCCCAGGGCAAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQPLHKG*PRAKRP
Trigger: TGGCCTCTTTGCCCTGGGCCAGCCTTTGTGAAGTGG...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTAGCAGCTGTCAGGCCATaGCCGAAGCTGAAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVAAVRP*PKLKPR
Trigger: TCTGGGCTTCAGCTTCGGCCATGGCCTGACAGCTGC...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGTCAGCTCCTCCCGCATaGCTGAAAGCAAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQSAPPA*LKARPQ
Trigger: CTGAGGTCTTGCTTTCAGCCATGCGGGAGGAGCTGA...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGTCAGCTCCTCCCGCATaGCTGAAAGCAAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQESAPPA*LKARPQ
Trigger: CTGAGGTCTTGCTTTCAGCCATGCGGGAGGAGCTGA...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGCGAACCAGCACAACGTaGAGATACAGGTCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQRTSTT*RYRSGS
Trigger: GCTTCCGGACCTGTATCTCCACGTTGTGCTGGTTCG...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGTCTGCACATCTTGGATaGTGTCGGGCAGCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWSAHLG*CRAAAS
Trigger: GCTTGCCGCTGCCCGACACCATCCAAGATGTGCAGA...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTGGTTCTGCACATCTTaGATGGTGTCGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQWFCTS*MVSGSG
Trigger: GCCGCTGCCCGACACCATCCAAGATGTGCAGAACCA...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGGAGGCTAAAACTGTGTaGATTTTAGGACAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: HGTAPTLWELIGWQGGRREAKTV*ILGQSS
Trigger: GGAACTCTGTCCTAAAATCCACACAGTTTTAGCCTC...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCAGCCTCTGGGCCTCTaGAAATGGAGGTCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEQPLGL*KWRSLL
Trigger: AAGCAAAGACCTCCATTTCCAGAGGCCCAGAGGCTG...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTCAGCCTCTGGGCCTCTaGAAATGGAGGTCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFQPLGL*KWRSLL
Trigger: AAGCAAAGACCTCCATTTCCAGAGGCCCAGAGGCTG...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGAGGGTGATGGTGCACTaGGTCACCTCCTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQERVMVH*VTSCQS
Trigger: TGATTGGCAGGAGGTGACCCAGTGCACCATCACCCT...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTATGGGACATGGGGTCATaGGACTGCCCCAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVWDMGS*DCPNPL
Trigger: CAGAGGGTTGGGGCAGTCCCATGACCCCATGTCCCA...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGCCCCTAATTTGGGGCTaGGGCAGCTGTGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWPLIWG*GSCASL
Trigger: GAGACTTGCACAGCTGCCCCAGCCCCAAATTAGGGG...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR TCA 90 bp GGGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCTAGGATGCTGGCCTaGGCCGTGCTGTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GQPFICFFIQSLAPMPLWPRMLA*AVLLSR
Trigger: CCTGGACAACAGCACGGCTCAGGCCAGCATCCTAGG...CCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR TCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGAGAAGTCTCTTCCTCTaGCCGTCCCATCGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQRSLFL*PSHRRF
Trigger: GAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCT...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGGTAAAGCTGTGGAGCTaGGACTCTACTGCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEVKLWS*DSTACV
Trigger: CACACAAGCAGTAGAGTCTCAGCTCCACAGCTTTAC...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTACCATCGTGCCGACTCTaGCAGCCACCAGGAGTACAA +
Preference number: 4 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVPSCRL*QPPGVQ
Trigger: TTGTACTCCTGGTGGCTGGCAGAGTCGGCACGATGG...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGATCAGAGCCATCGTCTaGAGAACCTGGAACCTGCCC +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQIRAIV*RTWNLP
Trigger: GGGCAGGTTCCAGGTTCTCCAGACGATGGCTCTGAT...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR CCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGTTCTCCAGCATGCTCTaGGTACACAGCCACATGATG +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEFSSML*VHSHMM
Trigger: CATCATGTGGCTGTGTACCCAGAGCATGCTGGAGAA...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR CCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTATCTGCACATCTTGGATaGTGTCGGGCAGCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVSAHLG*CRAAAS
Trigger: GCTTGCCGCTGCCCGACACCATCCAAGATGTGCAGA...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTATGGTTCTGCACATCTTaGATGGTGTCGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVWFCTS*MVSGSG
Trigger: GCCGCTGCCCGACACCATCCAAGATGTGCAGAACCA...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGCTGGGCCTCTGGAAATaGAGGTCTTTGCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQELGLWK*RSLLSS
Trigger: GGAGGAAAGCAAAGACCTCCATTTCCAGAGGCCCAG...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGCAGCCTCTGGGCCTCTaGAAATGGAGGTCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQQPLGL*KWRSLL
Trigger: AAGCAAAGACCTCCATTTCCAGAGGCCCAGAGGCTG...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGGGTCTTGACCATGGATaGTGGTTAGCTCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEGLDHG*WLALSS
Trigger: AGAGCTCAGAGCTAACCACCATCCATGGTCAAGACC...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTGGTCTTGACCATGGATaGTGGTTAGCTCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFGLDHG*WLALSS
Trigger: AGAGCTCAGAGCTAACCACCATCCATGGTCAAGACC...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GGGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGGCACCAATGCCTCTCTaGCCCAGCGCTGTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GQPFICFFIQSLAPMPLWAPMPL*PSAVWG
Trigger: TCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGC...CCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR TCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGATGGGCTTCAGAGCATaGGAGTCACACACGAGGTTC +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQMGFRA*ESHTRF
Trigger: GAACCTCGTGTGTGACTCTCATGCTCTGAAGCCCAT...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTGTCCACGACACCAATaGACATTTGGAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFCPRHQ*TFGAGR
Trigger: TCTTCCTGCTCCAAATGTTCATTGGTGTCGTGGACA...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGTGTCCACGACACCAATaGACATTTGGAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGECPRHQ*TFGAGR
Trigger: TCTTCCTGCTCCAAATGTTCATTGGTGTCGTGGACA...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGGTAAAGCTGTGGAGCTaGGACTCTACTGCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEVKLWS*DSTACV
Trigger: CACACAAGCAGTAGAGTCTCAGCTCCACAGCTTTAC...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTAAAGCTGTGGAGCTaGGACTCTACTGCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQVKLWS*DSTACV
Trigger: CACACAAGCAGTAGAGTCTCAGCTCCACAGCTTTAC...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCTTTCCCCCACGGTGGTaGCCACAGTGGCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSHSFVSLFNPSHQCLSGFPPRW*PQWLLQ
Trigger: CTGGAGAAGCCACTGTGGGCACCACCGTGGGGGAAA...GCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR GCA 90 bp GGGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGGCAGGAAGATGTTGCTaGCCAGGGCCTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GQPFICFFIQSLAPMPLWAGRCC*PGPAGP
Trigger: TGGACCTGCAGGCCCTGGGCAGCAACATCTTCCTGC...CCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR GCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTTTACTGCCTGGTTCTaGACATCTTGGATGGTGTCG +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFFTAWF*TSWMVS
Trigger: CGACACCATCCAAGATGTGCAGAACCAGGCAGTAAA...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGGAAATGGAGGTCTTTaGTTTCCTCCTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQGNGGL*FPPAFS
Trigger: GGAGAAGGCAGGAGGAAAGCAAAGACCTCCATTTCC...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGGGAAATGGAGGTCTTTaGTTTCCTCCTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEGNGGL*FPPAFS
Trigger: GGAGAAGGCAGGAGGAAAGCAAAGACCTCCATTTCC...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCAGAAAATGCCATaGAACCTACTCAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQVQKMP*NLLKGP
Trigger: GGGCCCCTTGAGTAGGTTCCATGGCATTTTCTGAAC...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR CCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTAATCAGAGCCATCGTCTaGAGAACCTGGAACCTGCCC +
Preference number: 4 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVIRAIV*RTWNLP
Trigger: GGGCAGGTTCCAGGTTCTCCAGACGATGGCTCTGAT...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR CCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGTTCTCCAGCATGCTCTaGGTACACAGCCACATGATG +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEFSSML*VHSHMM
Trigger: CATCATGTGGCTGTGTACCCAGAGCATGCTGGAGAA...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR CCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTATCAGCTCCTCCCGCATaGCTGAAAGCAAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVSAPPA*LKARPQ
Trigger: CTGAGGTCTTGCTTTCAGCCATGCGGGAGGAGCTGA...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTACGAACCAGCACAACGTaGAGATACAGGTCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVRTSTT*RYRSGS
Trigger: GCTTCCGGACCTGTATCTCCACGTTGTGCTGGTTCG...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GGGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGGTTAGCTCTGAGCTCTaGGCAGGTGGACGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GQPFICFFIQSLAPMPLWVSSEL*AGGRVW
Trigger: CCACACCCGTCCACCTGCCCAGAGCTCAGAGCTAAC...CCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR TCA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGACCTCCCGGGAAAGCTaGATTTGGAAAGTAGGGAAT +
Preference number: 4 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQTSRES*IWKVGN
Trigger: ATTCCCTACTTTCCAAATTCAGCTTTCCCGGGAGGT...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGAGAAGTTCTCCAGCATaGTCTGGGTACACAGCCACA +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWRSSPA*SGYTAT
Trigger: TGTGGCTGTGTACCCAGAGCATGCTGGAGAACTTCT...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR GCA 90 bp GGGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGGCGTGTTGGCCAGAATaGAGAGCCCTGCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: GQPFICFFIQSLAPMPLWACWPE*RALPAT
Trigger: TGTTGCTGGCAGGGCTCTGCATTCTGGCCAACACGC...CCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR GCA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTGTTGCCTTCTTTACTaGCTGGTTCTGCACATCTTG +
Preference number: 4 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFCCLLY*LVLHIL
Trigger: CAAGATGTGCAGAACCAGGCAGTAAAGAAGGCAACA...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGCAGAGTTCCCCAGCGTaGCATGTGTTGCCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWQSSPA*HVLPSL
Trigger: TAAAGAAGGCAACACATGGCACGCTGGGGAACTCTG...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGCACTGGGTCACCTCCTaGCAATCAAACTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEHWVTS*QSNCPF
Trigger: AAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTG...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGCACTGGGTCACCTCCTaGCAATCAAACTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQHWVTS*QSNCPF
Trigger: AAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTG...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GGGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCACTTCACAAAGGCTaGCCCAGGGCAAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GQPFICFFIQSLAPMPLWPLHKG*PRAKRP
Trigger: TGGCCTCTTTGCCCTGGGCCAGCCTTTGTGAAGTGG...CCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR CCA 90 bp GGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCGGCGCCCATCTTGGCTaGGATGTCCACGACACCAAT +
Preference number: 4 (lower is better)
Translates to: GSHSFVSLFNPSHQCLSGGAHLG*DVHDTN
Trigger: ATTGGTGTCGTGGACATCCCAGCCAAGATGGGCGCC...GCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR TCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTGTCCACGACACCAATaGACATTTGGAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQCPRHQ*TFGAGR
Trigger: TCTTCCTGCTCCAAATGTTCATTGGTGTCGTGGACA...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGACCTCCCGGGAAAGCTaGATTTGGAAAGTAGGGAAT +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWTSRES*IWKVGN
Trigger: ATTCCCTACTTTCCAAATTCAGCTTTCCCGGGAGGT...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR TCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGACTGGAATTAAAGTGTaGCCGGTGACACTTATGGAA +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGETGIKV*PVTLME
Trigger: TTCCATAAGTGTCACCGGTCACACTTTAATTCCAGT...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR GCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGTTTACTGCCTGGTTCTaGACATCTTGGATGGTGTCG +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWFTAWF*TSWMVS
Trigger: CGACACCATCCAAGATGTGCAGAACCAGGCAGTAAA...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGGCCTTCTTTACTGCCTaGTTCTGCACATCTTGGATG +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQAFFTA*FCTSWM
Trigger: CATCCAAGATGTGCAGAACCAGGCAGTAAAGAAGGC...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGGAGGCTAAAACTGTGTaGATTTTAGGACAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEEAKTV*ILGQSS
Trigger: GGAACTCTGTCCTAAAATCCACACAGTTTTAGCCTC...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GGGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGAGGGTGATGGTGCACTaGGTCACCTCCTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: GQPFICFFIQSLAPMPLWRVMVH*VTSCQS
Trigger: TGATTGGCAGGAGGTGACCCAGTGCACCATCACCCT...CCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR GCA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTGTTGCCTTCTTTACTaGCTGGTTCTGCACATCTTG +
Preference number: 4 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQCCLLY*LVLHIL
Trigger: CAAGATGTGCAGAACCAGGCAGTAAAGAAGGCAACA...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CCA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTAGCCTTCTTTACTGCCTaGTTCTGCACATCTTGGATG +
Preference number: 4 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVAFFTA*FCTSWM
Trigger: CATCCAAGATGTGCAGAACCAGGCAGTAAAGAAGGC...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCGGAAATGGAGGTCTTTaGTTTCCTCCTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GSHSFVSLFNPSHQCLSGGNGGL*FPPAFS
Trigger: GGAGAAGGCAGGAGGAAAGCAAAGACCTCCATTTCC...GCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR CCA 90 bp GGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCTTCTCCAGCATGCTCTaGGTACACAGCCACATGATG +
Preference number: 4 (lower is better)
Translates to: GSHSFVSLFNPSHQCLSGFSSML*VHSHMM
Trigger: CATCATGTGGCTGTGTACCCAGAGCATGCTGGAGAA...GCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR CCA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGGAGGCTAAAACTGTGTaGATTTTAGGACAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWEAKTV*ILGQSS
Trigger: GGAACTCTGTCCTAAAATCCACACAGTTTTAGCCTC...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR GCA 90 bp GGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCACTGGGTCACCTCCTaGCAATCAAACTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: GSHSFVSLFNPSHQCLSGHWVTS*QSNCPF
Trigger: AAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTG...GCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR TCA 90 bp GGGCAGCCATTCATTTGTTTCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGTTAAAGTGTGACCGGTaGCACTTATGGAATCGAGTT +
Preference number: 4 (lower is better)
Translates to: GQPFICFFIQSLAPMPLWLKCDR*HLWNRV
Trigger: AACTCGATTCCATAAGTGTCACCGGTCACACTTTAA...CCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAAATGAATGGCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS CCA 90 bp AGCACTGGCACCGTCCCATACACCAGCAAGGGCAGCCAGGGGCCATaGACACCCAGCAGCCGGACCAGAGGCCCCAGGATGGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: STGTVPYTSKGSQGP*TPSSRTRGPRMAPP
Trigger: TGGAGGAGCCATCCTGGGGCCTCTGGTCCGGCTGCTGGGTGTCCATGGCCCCTGGCTGCCCTTGCTGGTGTATGGGACGGTGCCAGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS CCA 90 bp GCTCTGGGTCTCGGGCAGAAGCAGTGCGGCCAGGCCACTCAGCACTaGCACCGTCCCATACACCAGCAAGGGCAGCCAGGGGCCATGGAC +
Preference number: 5 (lower is better)
Translates to: ALGLGQKQCGQATQH*HRPIHQQGQPGAMD
Trigger: GTCCATGGCCCCTGGCTGCCCTTGCTGGTGTATGGGACGGTGCCAGTGCTGAGTGGCCTGGCCGCACTGCTTCTGCCCGAGACCCAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS GCA 90 bp TTCACAGACTCGGGGCCGGAGGCTCAGGCTCTCTGGTCATCTGCCTaGTGGTGTCACTTGGGGTGGCTCCAACTGGGCCCTGAGGCCGCG +
Preference number: 5 (lower is better)
Translates to: FTDSGPEAQALWSSA*WCHLGWLQLGPEAA
Trigger: CGCGGCCTCAGGGCCCAGTTGGAGCCACCCCAAGTGACACCAGCAGGCAGATGACCAGAGAGCCTGAGCCTCCGGCCCCGAGTCTGTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS CCA 90 bp GGCCGGAGGCTCAGGCTCTCTGGTCATCTGCCTGCTGGTGTCACTTaGGGTGGCTCCAACTGGGCCCTGAGGCCGCGTGAGGTGATTCCG +
Preference number: 5 (lower is better)
Translates to: GRRLRLSGHLPAGVT*GGSNWALRPREVIP
Trigger: CGGAATCACCTCACGCGGCCTCAGGGCCCAGTTGGAGCCACCCCAAGTGACACCAGCAGGCAGATGACCAGAGAGCCTGAGCCTCCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS GCA 90 bp GATGGTGTCGGGCAGCGGCAAGCTCTGGGTCTCGGGCAGAAGCAGTaGGGCCAGGCCACTCAGCACTGGCACCGTCCCATACACCAGCAA +
Preference number: 5 (lower is better)
Translates to: DGVGQRQALGLGQKQ*GQATQHWHRPIHQQ
Trigger: TTGCTGGTGTATGGGACGGTGCCAGTGCTGAGTGGCCTGGCCGCACTGCTTCTGCCCGAGACCCAGAGCTTGCCGCTGCCCGACACCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS CCA 90 bp CAGCGGCTAGGCTTCACAGACTCGGGGCCGGAGGCTCAGGCTCTCTaGTCATCTGCCTGCTGGTGTCACTTGGGGTGGCTCCAACTGGGC +
Preference number: 5 (lower is better)
Translates to: QRLGFTDSGPEAQAL*SSACWCHLGWLQLG
Trigger: GCCCAGTTGGAGCCACCCCAAGTGACACCAGCAGGCAGATGACCAGAGAGCCTGAGCCTCCGGCCCCGAGTCTGTGAAGCCTAGCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS CCA 90 bp GCCTGGTTCTGCACATCTTGGATGGTGTCGGGCAGCGGCAAGCTCTaGGTCTCGGGCAGAAGCAGTGCGGCCAGGCCACTCAGCACTGGC +
Preference number: 5 (lower is better)
Translates to: AWFCTSWMVSGSGKL*VSGRSSAARPLSTG
Trigger: GCCAGTGCTGAGTGGCCTGGCCGCACTGCTTCTGCCCGAGACCCAGAGCTTGCCGCTGCCCGACACCATCCAAGATGTGCAGAACCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCATGGGGCACCAGCGTGTaGGCCAGAATGCAGAGCCCT +
Preference number: 5 (lower is better)
Translates to: SEATRAGQGDGALGHLLPWGTSV*ARMQSP
Trigger: AGGGCTCTGCATTCTGGCCAACACGCTGGTGCCCCA...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS TCA 90 bp CCCGCACACCGTAGGCCACTGCAGCTGTCAGGCCATGGCCGAAGCTaGAGCCCAGAGAGTTCAAGGTCATCACCAAGGGTCGGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: PAHRRPLQLSGHGRS*SPESSRSSPRVGPV
Trigger: CACGGGCCCGACCCTTGGTGATGACCTTGAACTCTCTGGGCTTCAGCTTCGGCCATGGCCTGACAGCTGCAGTGGCCTACGGTGTGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336464.7
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCGCCTGCTGGTGTCACTaGGGGTGGCTCCAACTGGGC +
Preference number: 5 (lower is better)
Translates to: GPGARLTGLLGKAVELRLACWCH*GWLQLG
Trigger: GCCCAGTTGGAGCCACCCCAAGTGACACCAGCAGGC...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGACTGCCCCCTTTCCGTaGATGGCAGCCACCCTCCAC +
Preference number: 5 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRTAPFP*MAATLH
Trigger: GTGGAGGGTGGCTGCCATCAACGGAAAGGGGGCAGT...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGAGCAGGGCGCCCATCTaGGCTGGGATGTCCACGACA +
Preference number: 5 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMSRAPI*AGMSTT
Trigger: TGTCGTGGACATCCCAGCCAAGATGGGCGCCCTGCT...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTGAGTCAAGCAGAGGGTaGGCAAGGCCAGCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPESSRG*ARPARS
Trigger: GGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTC...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGTGCAGCCTCCTCTGCTaGGGGGCCAGGGCCGGCCTG +
Preference number: 5 (lower is better)
Translates to: SLFNPSHQCLSGPALCGECSLLC*GARAGL
Trigger: CAGGCCGGCCCTGGCCCCCAAGCAGAGGAGGCTGCA...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS TCA 90 bp CCCGTGCCGCCGTCCACTCCATCAGGAGAGTGCCCGTGTTCATCATaGCGCCTGCCACGGCAAAGGCCAACAGGAAGCGGAACAGGCAGT +
Preference number: 5 (lower is better)
Translates to: PVPPSTPSGECPCSS*RLPRQRPTGSGTGS
Trigger: ACTGCCTGTTCCGCTTCCTGTTGGCCTTTGCCGTGGCAGGCGTCATGATGAACACGGGCACTCTCCTGATGGAGTGGACGGCGGCACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377574.6
CDS-3UTR CAA 90 bp TCCGAAGCCACGAGGGCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCACACACGAGGTTCCACTaGGCCACGATTGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: SEATRAGQGDGALGHLLPHTRFH*ATIVEV
Trigger: CACCTCCACAATCGTGGCCAAGTGGAACCTCGTGTG...TGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGCCCTCGTGGCTTCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACTGCCCCCTTTCCGTaGATGGCAGCCACCCTCCAC +
Preference number: 5 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGTAPFP*MAATLH
Trigger: GTGGAGGGTGGCTGCCATCAACGGAAAGGGGGCAGT...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp ATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGAGCAGGGCGCCCATCTaGGCTGGGATGTCCACGACA +
Preference number: 5 (lower is better)
Translates to: IQSLAPMPLWPSAVWGAGSRAPI*AGMSTT
Trigger: TGTCGTGGACATCCCAGCCAAGATGGGCGCCCTGCT...CCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp AGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTGGTTCTGCACATCTaGGATGGTGTCGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: SQAEGWQGQLVPLGLTPLLVLHI*DGVGQR
Trigger: CCGCTGCCCGACACCATCCAAGATGTGCAGAACCAG...CAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp CATGGGACTGCCCCAACCCTCTGGGAACTCATAGGCTGGCAGGGTGGGAGGAGGGGAAAGCTGCTGTGGTaGGCGTCCTGTGCCCGCTTT +
Preference number: 5 (lower is better)
Translates to: HGTAPTLWELIGWQGGRRGKLLW*ASCARF
Trigger: AAAGCGGGCACAGGACGCCAACCACAGCAGCTTTCC...CCTCCTCCCACCCTGCCAGCCTATGAGTTCCCAGAGGGTTGGGGCAGTCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377567.6
CDS-3UTR CAA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGGAGTCAAGCAGAGGGTaGGCAAGGCCAGCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMESSRG*ARPARS
Trigger: GGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTC...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS GCA 90 bp GACCACCAGCTGCAGCAGTGTCCAGTCCCGCACACCGTAGGCCACTaGAGCTGTCAGGCCATGGCCGAAGCTGAAGCCCAGAGAGTTCAA +
Preference number: 5 (lower is better)
Translates to: DHQLQQCPVPHTVGH*SCQAMAEAEAQRVQ
Trigger: TTGAACTCTCTGGGCTTCAGCTTCGGCCATGGCCTGACAGCTGCAGTGGCCTACGGTGTGCGGGACTGGACACTGCTGCAGCTGGTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336464.7
ENST00000377574.6
ENST00000473690.5
CDS GCA 90 bp CGCCGTCCACTCCATCAGGAGAGTGCCCGTGTTCATCATGACGCCTaGCACGGCAAAGGCCAACAGGAAGCGGAACAGGCAGTACACGGG +
Preference number: 5 (lower is better)
Translates to: RRPLHQESARVHHDA*HGKGQQEAEQAVHG
Trigger: CCCGTGTACTGCCTGTTCCGCTTCCTGTTGGCCTTTGCCGTGGCAGGCGTCATGATGAACACGGGCACTCTCCTGATGGAGTGGACGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377574.6
CDS CCA 90 bp CTCTCTGGTCATCTGCCTGCTGGTGTCACTTGGGGTGGCTCCAACTaGGCCCTGAGGCCGCGTGAGGTGATTCCGAGACCTCCAGCATCT +
Preference number: 5 (lower is better)
Translates to: LSGHLPAGVTWGGSN*ALRPREVIPRPPAS
Trigger: AGATGCTGGAGGTCTCGGAATCACCTCACGCGGCCTCAGGGCCCAGTTGGAGCCACCCCAAGTGACACCAGCAGGCAGATGACCAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGCCTGCTGGTGTCACTaGGGGTGGCTCCAACTGGGC +
Preference number: 5 (lower is better)
Translates to: LFNPSHQCLSGPALCGELACWCH*GWLQLG
Trigger: GCCCAGTTGGAGCCACCCCAAGTGACACCAGCAGGC...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp ATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGGACATGCACACGAGGTTCCACTaGGCCACGATTGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: IPRTNASLAQRCVGSWDMHTRFH*ATIVEV
Trigger: CACCTCCACAATCGTGGCCAAGTGGAACCTCGTGTG...CATGTCCCAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp GGGCCAGGGGCCAGGCTTACAGGGCTTCTGGGTAAAGCTGTGGAGCTGAGACTCCTGGTTCTGCACATCTaGGATGGTGTCGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: GPGARLTGLLGKAVELRLLVLHI*DGVGQR
Trigger: CCGCTGCCCGACACCATCCAAGATGTGCAGAACCAG...GAGTCTCAGCTCCACAGCTTTACCCAGAAGCCCTGTAAGCCTGGCCCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp CGGAGTCAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCCAGCGTGCCATGTGTaGCCTTCTTTACTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: RSQAEGWQGQLVPLGLTPPACHV*PSLLPG
Trigger: ACCAGGCAGTAAAGAAGGCAACACATGGCACGCTGG...AGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCGCTCTGTGCCAGGTCTaGGGGAGGCCTAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLALCQV*GRPKFF
Trigger: GAAAAACTTAGGCCTCCCCAAGACCTGGCACAGAGC...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS-3UTR CAA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGGCCTGCTGGTGTCACTaGGGGTGGCTCCAACTGGGC +
Preference number: 5 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEACWCH*GWLQLG
Trigger: GCCCAGTTGGAGCCACCCCAAGTGACACCAGCAGGC...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS TCA 90 bp GCAGCAGCAGGGCGCCCATCTTGGCTGGGATGTCCACGACACCAATaGACATTTGGAGCAGGAAGATGTTGCTGCCCAGGGCCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: AAAGRPSWLGCPRHQ*TFGAGRCCCPGPAG
Trigger: ACCTGCAGGCCCTGGGCAGCAACATCTTCCTGCTCCAAATGTTCATTGGTGTCGTGGACATCCCAGCCAAGATGGGCGCCCTGCTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp GCAGGGCAGGGTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTGGGGCACCAGCGTGTaGGCCAGAATGCAGAGCCCT +
Preference number: 5 (lower is better)
Translates to: AGQGDGALGHLLPIKLSFWGTSV*ARMQSP
Trigger: AGGGCTCTGCATTCTGGCCAACACGCTGGTGCCCCA...AAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCACCCTGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGTGGGGCACCAGCGTGTaGGCCAGAATGCAGAGCCCT +
Preference number: 5 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEWGTSV*ARMQSP
Trigger: AGGGCTCTGCATTCTGGCCAACACGCTGGTGCCCCA...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGCGTCCTGTGCCCGCTTaGCTGTTACCCTGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: LFNPSHQCLSGPALCGELRPVPA*LLPCPE
Trigger: CTCAGGACAGGGTAACAGCAAAGCGGGCACAGGACG...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377567.6
CDS-3UTR CAA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGACTGCCCCCTTTCCGTaGATGGCAGCCACCCTCCAC +
Preference number: 5 (lower is better)
Translates to: REQKKSLPLTVPSQVPQETAPFP*MAATLH
Trigger: GTGGAGGGTGGCTGCCATCAACGGAAAGGGGGCAGT...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp CCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGAGCAGGGCGCCCATCTaGGCTGGGATGTCCACGACA +
Preference number: 5 (lower is better)
Translates to: PAFSREQKKSLPLTVPSQSRAPI*AGMSTT
Trigger: TGTCGTGGACATCCCAGCCAAGATGGGCGCCCTGCT...CTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGGTTCTGCACATCTaGGATGGTGTCGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: SLFNPSHQCLSGPALCGELVLHI*DGVGQR
Trigger: CCGCTGCCCGACACCATCCAAGATGTGCAGAACCAG...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp CAAGCAGAGGGTTGGCAAGGCCAGCTCGTTCCCCTGGGCCTGACCCCTCTGCTCGACACCAATGAACATTaGGAGCAGGAAGATGTTGCT +
Preference number: 5 (lower is better)
Translates to: QAEGWQGQLVPLGLTPLLDTNEH*EQEDVA
Trigger: AGCAACATCTTCCTGCTCCAAATGTTCATTGGTGTC...GAGCAGAGGGGTCAGGCCCAGGGGAACGAGCTGGCCTTGCCAACCCTCTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTGGGGCACCAGCGTGTaGGCCAGAATGCAGAGCCCT +
Preference number: 5 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQWGTSV*ARMQSP
Trigger: AGGGCTCTGCATTCTGGCCAACACGCTGGTGCCCCA...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGCCAGCGTGCCATGTGTaGCCTTCTTTACTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LFNPSHQCLSGPALCGELPACHV*PSLLPG
Trigger: ACCAGGCAGTAAAGAAGGCAACACATGGCACGCTGG...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS CCA 90 bp CACAGCCACATGATGGAGACCATCAGAGCCATCGTCTGGAGAACCTaGAACCTGCCCAGGCCACCCACGAGGTCCAGGAGTTCAGAAAAT +
Preference number: 5 (lower is better)
Translates to: HSHMMETIRAIVWRT*NLPRPPTRSRSSEN
Trigger: ATTTTCTGAACTCCTGGACCTCGTGGGTGGCCTGGGCAGGTTCCAGGTTCTCCAGACGATGGCTCTGATGGTCTCCATCATGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS-3UTR CAA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTAAGCAGGGCGCCCATCTaGGCTGGGATGTCCACGACA +
Preference number: 5 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVSRAPI*AGMSTT
Trigger: TGTCGTGGACATCCCAGCCAAGATGGGCGCCCTGCT...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp TCTTTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCCAGCGTGCCATGTGTaGCCTTCTTTACTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: SLFNPSHQCLSGPALCGEPACHV*PSLLPG
Trigger: ACCAGGCAGTAAAGAAGGCAACACATGGCACGCTGG...CTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGGAGTCAAGCAGAGGGTaGGCAAGGCCAGCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWESSRG*ARPARS
Trigger: GGAACGAGCTGGCCTTGCCAACCCTCTGCTTGACTC...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS TCA 90 bp GCTTTCCTCCTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTaGCCGTCCCATCGCAGGTTCCCCAGGAGGCTAAAACTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: AFLLPSPENRRSLFL*PSHRRFPRRLKLCG
Trigger: TCCACACAGTTTTAGCCTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAGGAGGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp TTATTCAATCCCTCGCACCAATGCCTCTCTGGCCCAGCGCTGTGTGGGGAGCTGCCGGGAAAGCTGAATTaGGAAAGTAGGGAATGTGGA +
Preference number: 5 (lower is better)
Translates to: LFNPSHQCLSGPALCGELPGKLN*ESRECG
Trigger: TCCACATTCCCTACTTTCCAAATTCAGCTTTCCCGG...CAGCTCCCCACACAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTACCAGCGTGCCATGTGTaGCCTTCTTTACTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVPACHV*PSLLPG
Trigger: ACCAGGCAGTAAAGAAGGCAACACATGGCACGCTGG...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp AGAGAACAGAAGAAGTCTCTTCCTCTGACCGTCCCATCGCAGGTTCCCCAGGAGCCGGGAAAGCTGAATTaGGAAAGTAGGGAATGTGGA +
Preference number: 5 (lower is better)
Translates to: REQKKSLPLTVPSQVPQEPGKLN*ESRECG
Trigger: TCCACATTCCCTACTTTCCAAATTCAGCTTTCCCGG...CTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGCCGGGAAAGCTGAATTaGGAAAGTAGGGAATGTGGA +
Preference number: 5 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQPGKLN*ESRECG
Trigger: TCCACATTCCCTACTTTCCAAATTCAGCTTTCCCGG...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp GAGCTGAGACTCTACTGCTTGTGTGGAGCTAGGAGAGGTCTTGACCATGGATGGGACACCAATGAACATTaGGAGCAGGAAGATGTTGCT +
Preference number: 5 (lower is better)
Translates to: ELRLYCLCGARRGLDHGWDTNEH*EQEDVA
Trigger: AGCAACATCTTCCTGCTCCAAATGTTCATTGGTGTC...CCATCCATGGTCAAGACCTCTCCTAGCTCCACACAAGCAGTAGAGTCTCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS-3UTR CAA 90 bp GTGATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGGACACCAATGAACATTaGGAGCAGGAAGATGTTGCT +
Preference number: 5 (lower is better)
Translates to: VMVHWVTSCQSNCPFPLQDTNEH*EQEDVA
Trigger: AGCAACATCTTCCTGCTCCAAATGTTCATTGGTGTC...CTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS TCA 90 bp AGCATCTCCCCAGAGAGGCAGCTGCTCCAGACCTCCCGGGAAAGCTaGATTTGGAAAGTAGGGAATGTGGAGACTGAAGACTTTAATTTT +
Preference number: 5 (lower is better)
Translates to: SISPERQLLQTSRES*IWKVGNVETEDFNF
Trigger: AAAATTAAAGTCTTCAGTCTCCACATTCCCTACTTTCCAAATTCAGCTTTCCCGGGAGGTCTGGAGCAGCTGCCTCTCTGGGGAGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377572.5
ENST00000377574.6
CDS-3UTR CAA 90 bp GATGGTGCACTGGGTCACCTCCTGCCAATCAAACTGTCCTTTTCCCCTTCAGTAGACACCAATGAACATTaGGAGCAGGAAGATGTTGCT +
Preference number: 5 (lower is better)
Translates to: DGALGHLLPIKLSFSPSVDTNEH*EQEDVA
Trigger: AGCAACATCTTCCTGCTCCAAATGTTCATTGGTGTC...TACTGAAGGGGAAAAGGACAGTTTGATTGGCAGGAGGTGACCCAGTGCACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS CCA 72 bp TGCAGAGCCCTGCCAGCAACAGGGATGCGGCCAGCGTaGGGCGGCGGCCCAGGTGGCTCAGCAGCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: CRALPATGMRPA*GGGPGGSAAAG
Trigger: CCCTGCTGCTGCTGAGCCACCTGGGCCGCCGCCCCACGCTGGCCGCATCCCTGTTGCTGGCAGGGCTCTGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS CAA 90 bp GCGTTGAGGCAGGCACAGACGCGAGGGAGGTGCAGCCTCCTCTGCTaGGGGGCCAGGGCCGGCCTGCTCTGTGCCAGGTCTTGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: ALRQAQTRGRCSLLC*GARAGLLCARSWGG
Trigger: GCCTCCCCAAGACCTGGCACAGAGCAGGCCGGCCCTGGCCCCCAAGCAGAGGAGGCTGCACCTCCCTCGCGTCTGTGCCTGCCTCAACGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS CCA 72 bp CATGGACACCCAGCAGCCGGACCAGAGGCCCCAGGATaGCTCCTCCACGGGCTGCCATCTGGCCCAAGCCCA +
Preference number: 6 (lower is better)
Translates to: HGHPAAGPEAPG*LLHGLPSGPSP
Trigger: TGGGCTTGGGCCAGATGGCAGCCCGTGGAGGAGCCATCCTGGGGCCTCTGGTCCGGCTGCTGGGTGTCCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS GCA 72 bp GGGCAGCGGCAAGCTCTGGGTCTCGGGCAGAAGCAGTaGGGCCAGGCCACTCAGCACTGGCACCGTCCCATA +
Preference number: 6 (lower is better)
Translates to: GQRQALGLGQKQ*GQATQHWHRPI
Trigger: TATGGGACGGTGCCAGTGCTGAGTGGCCTGGCCGCACTGCTTCTGCCCGAGACCCAGAGCTTGCCGCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS CCA 72 bp CTCGGGCAGAAGCAGTGCGGCCAGGCCACTCAGCACTaGCACCGTCCCATACACCAGCAAGGGCAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: LGQKQCGQATQH*HRPIHQQGQPG
Trigger: CCCTGGCTGCCCTTGCTGGTGTATGGGACGGTGCCAGTGCTGAGTGGCCTGGCCGCACTGCTTCTGCCCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS CCA 72 bp CTCCCTTCGGTGCCCCTGTGTGCCCACCTCCCAGAGTaGCTGAGCCAAGAGAAGGTGGGCCAGGGGATCCCC +
Preference number: 6 (lower is better)
Translates to: LPSVPLCAHLPE*LSQEKVGQGIP
Trigger: GGGGATCCCCTGGCCCACCTTCTCTTGGCTCAGCCACTCTGGGAGGTGGGCACACAGGGGCACCGAAGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS GCA 72 bp TCGGGGCCGGAGGCTCAGGCTCTCTGGTCATCTGCCTaGTGGTGTCACTTGGGGTGGCTCCAACTGGGCCCT +
Preference number: 6 (lower is better)
Translates to: SGPEAQALWSSA*WCHLGWLQLGP
Trigger: AGGGCCCAGTTGGAGCCACCCCAAGTGACACCAGCAGGCAGATGACCAGAGAGCCTGAGCCTCCGGCCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS CCA 72 bp AGAGGCCCCAGGATGGCTCCTCCACGGGCTGCCATCTaGCCCAAGCCCACTGCCGTCATCCTGAGCACAGTG +
Preference number: 6 (lower is better)
Translates to: RGPRMAPPRAAI*PKPTAVILSTV
Trigger: CACTGTGCTCAGGATGACGGCAGTGGGCTTGGGCCAGATGGCAGCCCGTGGAGGAGCCATCCTGGGGCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS TCA 72 bp CACTTGGGGTGGCTCCAACTGGGCCCTGAGGCCGCGTaGGGTGATTCCGAGACCTCCAGCATCTCCCCAGAG +
Preference number: 6 (lower is better)
Translates to: HLGWLQLGPEAA*GDSETSSISPE
Trigger: CTCTGGGGAGATGCTGGAGGTCTCGGAATCACCTCACGCGGCCTCAGGGCCCAGTTGGAGCCACCCCAAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS TCA 72 bp AGGGCCTCAGGACTCAAGCTCCCTAGGATGCTGGCCTaGGCCGTGCTGTTGTCCAGGAGGGGTGCCCAGCAG +
Preference number: 6 (lower is better)
Translates to: RASGLKLPRMLA*AVLLSRRGAQQ
Trigger: CTGCTGGGCACCCCTCCTGGACAACAGCACGGCTCAGGCCAGCATCCTAGGGAGCTTGAGTCCTGAGGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS GCA 72 bp AGACTCGGGGCCGGAGGCTCAGGCTCTCTGGTCATCTaGCTGCTGGTGTCACTTGGGGTGGCTCCAACTGGG +
Preference number: 6 (lower is better)
Translates to: RLGAGGSGSLVI*LLVSLGVAPTG
Trigger: CCCAGTTGGAGCCACCCCAAGTGACACCAGCAGGCAGATGACCAGAGAGCCTGAGCCTCCGGCCCCGAGTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS GCA 72 bp CTGCAGCAGTGTCCAGTCCCGCACACCGTAGGCCACTaGAGCTGTCAGGCCATGGCCGAAGCTGAAGCCCAG +
Preference number: 6 (lower is better)
Translates to: LQQCPVPHTVGH*SCQAMAEAEAQ
Trigger: CTGGGCTTCAGCTTCGGCCATGGCCTGACAGCTGCAGTGGCCTACGGTGTGCGGGACTGGACACTGCTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336464.7
ENST00000377574.6
ENST00000473690.5
CDS CCA 72 bp GGCTTCACAGACTCGGGGCCGGAGGCTCAGGCTCTCTaGTCATCTGCCTGCTGGTGTCACTTGGGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: GFTDSGPEAQAL*SSACWCHLGWL
Trigger: GAGCCACCCCAAGTGACACCAGCAGGCAGATGACCAGAGAGCCTGAGCCTCCGGCCCCGAGTCTGTGAAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS CCA 72 bp TGCACATCTTGGATGGTGTCGGGCAGCGGCAAGCTCTaGGTCTCGGGCAGAAGCAGTGCGGCCAGGCCACTC +
Preference number: 6 (lower is better)
Translates to: CTSWMVSGSGKL*VSGRSSAARPL
Trigger: GAGTGGCCTGGCCGCACTGCTTCTGCCCGAGACCCAGAGCTTGCCGCTGCCCGACACCATCCAAGATGTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS CCA 72 bp CATCTGCCTGCTGGTGTCACTTGGGGTGGCTCCAACTaGGCCCTGAGGCCGCGTGAGGTGATTCCGAGACCT +
Preference number: 6 (lower is better)
Translates to: HLPAGVTWGGSN*ALRPREVIPRP
Trigger: AGGTCTCGGAATCACCTCACGCGGCCTCAGGGCCCAGTTGGAGCCACCCCAAGTGACACCAGCAGGCAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS CCA 72 bp AGCGCAGAGCCCCCATTTCGTGGGGCACCAGCGTGTTaGCCAGAATGCAGAGCCCTGCCAGCAACAGGGATG +
Preference number: 6 (lower is better)
Translates to: SAEPPFRGAPAC*PECRALPATGM
Trigger: CATCCCTGTTGCTGGCAGGGCTCTGCATTCTGGCCAACACGCTGGTGCCCCACGAAATGGGGGCTCTGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS GCA 72 bp CAGGCAGTACACGGGGAAGGCAGGGGCGAAGGCAGCTaGCGTACCCATCACAGCCATCTGAAGGTAGCTCCA +
Preference number: 6 (lower is better)
Translates to: QAVHGEGRGEGS*RTHHSHLKVAP
Trigger: TGGAGCTACCTTCAGATGGCTGTGATGGGTACGGCAGCTGCCTTCGCCCCTGCCTTCCCCGTGTACTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377574.6
CDS GCA 72 bp CAGAGAGTTCAAGGTCATCACCAAGGGTCGGGCCCGTaGCGCCGTCCACTCCATCAGGAGAGTGCCCGTGTT +
Preference number: 6 (lower is better)
Translates to: QRVQGHHQGSGP*RRPLHQESARV
Trigger: AACACGGGCACTCTCCTGATGGAGTGGACGGCGGCACGGGCCCGACCCTTGGTGATGACCTTGAACTCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377574.6
CDS CCA 72 bp CTGTGCCAGGTCTTGGGGAGGCCTAAGTTTTTCTCCTaGCGGCTGTGGGATGCCAGGGCTGCCTGCTCCCTT +
Preference number: 6 (lower is better)
Translates to: LCQVLGRPKFFS*RLWDARAACSL
Trigger: AAGGGAGCAGGCAGCCCTGGCATCCCACAGCCGCCAGGAGAAAAACTTAGGCCTCCCCAAGACCTGGCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377572.5
CDS GCA 72 bp GCCCCAATCCAGCCTGCCTGTGGTGAGGAGCCATCGTaGCGACTCTGCCAGCCACCAGGAGTACAAAAAGCA +
Preference number: 6 (lower is better)
Translates to: APIQPACGEEPS*RLCQPPGVQKA
Trigger: TGCTTTTTGTACTCCTGGTGGCTGGCAGAGTCGGCACGATGGCTCCTCACCACAGGCAGGCTGGATTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336464.7
ENST00000377574.6
ENST00000473690.5
CDS GCA 72 bp ATGGCTGAAAGCAAGACCTCAGGGGTCAGGGTGTCCTaGACTGCCCCCTTTCCGTTGATGGCAGCCACCCTC +
Preference number: 6 (lower is better)
Translates to: MAESKTSGVRVS*TAPFPLMAATL
Trigger: GAGGGTGGCTGCCATCAACGGAAAGGGGGCAGTGCAGGACACCCTGACCCCTGAGGTCTTGCTTTCAGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS GCA 72 bp GGGAAAGCTGCTGTGGTTGGCGTCCTGTGCCCGCTTTaGTGTTACCCTGTCCTGAGTCCTCGGTGGAGCTTC +
Preference number: 6 (lower is better)
Translates to: GKAAVVGVLCPL*CYPVLSPRWSF
Trigger: GAAGCTCCACCGAGGACTCAGGACAGGGTAACAGCAAAGCGGGCACAGGACGCCAACCACAGCAGCTTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377567.6
CDS CCA 72 bp CTGGGCACGGCGGCCGAGAAGTTCTCCAGCATGCTCTaGGTACACAGCCACATGATGGAGACCATCAGAGCC +
Preference number: 6 (lower is better)
Translates to: LGTAAEKFSSML*VHSHMMETIRA
Trigger: GGCTCTGATGGTCTCCATCATGTGGCTGTGTACCCAGAGCATGCTGGAGAACTTCTCGGCCGCCGTGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS CAA 72 bp CGGGAAAGCTGCTGTGGTTGGCGTCCTGTGCCCGCTTaGCTGTTACCCTGTCCTGAGTCCTCGGTGGAGCTT +
Preference number: 6 (lower is better)
Translates to: RESCCGWRPVPA*LLPCPESSVEL
Trigger: AAGCTCCACCGAGGACTCAGGACAGGGTAACAGCAAAGCGGGCACAGGACGCCAACCACAGCAGCTTTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377567.6
CDS TCA 72 bp CGTAGGCCACTGCAGCTGTCAGGCCATGGCCGAAGCTaGAGCCCAGAGAGTTCAAGGTCATCACCAAGGGTC +
Preference number: 6 (lower is better)
Translates to: RRPLQLSGHGRS*SPESSRSSPRV
Trigger: GACCCTTGGTGATGACCTTGAACTCTCTGGGCTTCAGCTTCGGCCATGGCCTGACAGCTGCAGTGGCCTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336464.7
ENST00000377574.6
ENST00000473690.5
CDS GCA 72 bp CTCCATCAGGAGAGTGCCCGTGTTCATCATGACGCCTaGCACGGCAAAGGCCAACAGGAAGCGGAACAGGCA +
Preference number: 6 (lower is better)
Translates to: LHQESARVHHDA*HGKGQQEAEQA
Trigger: TGCCTGTTCCGCTTCCTGTTGGCCTTTGCCGTGGCAGGCGTCATGATGAACACGGGCACTCTCCTGATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377574.6
CDS TCA 72 bp GGGCGCCCATCTTGGCTGGGATGTCCACGACACCAATaGACATTTGGAGCAGGAAGATGTTGCTGCCCAGGG +
Preference number: 6 (lower is better)
Translates to: GRPSWLGCPRHQ*TFGAGRCCCPG
Trigger: CCCTGGGCAGCAACATCTTCCTGCTCCAAATGTTCATTGGTGTCGTGGACATCCCAGCCAAGATGGGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS TCA 72 bp TTGGCGTCCTGTGCCCGCTTTGCTGTTACCCTGTCCTaGGTCCTCGGTGGAGCTTCCCAGCATCAACAGACA +
Preference number: 6 (lower is better)
Translates to: LASCARFAVTLS*VLGGASQHQQT
Trigger: TGTCTGTTGATGCTGGGAAGCTCCACCGAGGACTCAGGACAGGGTAACAGCAAAGCGGGCACAGGACGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377567.6
CDS CCA 72 bp ATCTTGGCTGGGATGTCCACGACACCAATGAACATTTaGAGCAGGAAGATGTTGCTGCCCAGGGCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: ILAGMSTTPMNI*SRKMLLPRACR
Trigger: CCTGCAGGCCCTGGGCAGCAACATCTTCCTGCTCCAAATGTTCATTGGTGTCGTGGACATCCCAGCCAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS TCA 72 bp CTGCCTTCTCCAGAGAACAGAAGAAGTCTCTTCCTCTaGCCGTCCCATCGCAGGTTCCCCAGGAGGCTAAAA +
Preference number: 6 (lower is better)
Translates to: LPSPENRRSLFL*PSHRRFPRRLK
Trigger: TTTTAGCCTCCTGGGGAACCTGCGATGGGACGGTCAGAGGAAGAGACTTCTTCTGTTCTCTGGAGAAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS TCA 72 bp CCAGAGAGGCAGCTGCTCCAGACCTCCCGGGAAAGCTaGATTTGGAAAGTAGGGAATGTGGAGACTGAAGAC +
Preference number: 6 (lower is better)
Translates to: PERQLLQTSRES*IWKVGNVETED
Trigger: GTCTTCAGTCTCCACATTCCCTACTTTCCAAATTCAGCTTTCCCGGGAGGTCTGGAGCAGCTGCCTCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5
CDS TCA 72 bp AGAAGTTCTCCAGCATGCTCTGGGTACACAGCCACATaGTGGAGACCATCAGAGCCATCGTCTGGAGAACCT +
Preference number: 6 (lower is better)
Translates to: RSSPACSGYTAT*WRPSEPSSGEP
Trigger: AGGTTCTCCAGACGATGGCTCTGATGGTCTCCATCATGTGGCTGTGTACCCAGAGCATGCTGGAGAACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
CDS CAA 72 bp TGGATTTTAGGACAGAGTTCCCCAGCGTGCCATGTGTaGCCTTCTTTACTGCCTGGTTCTGCACATCTTGGA +
Preference number: 6 (lower is better)
Translates to: WILGQSSPACHV*PSLLPGSAHLG
Trigger: TCCAAGATGTGCAGAACCAGGCAGTAAAGAAGGCAACACATGGCACGCTGGGGAACTCTGTCCTAAAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336464.7
ENST00000377567.6
ENST00000377572.5
ENST00000377574.6
ENST00000473690.5