RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC20A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000168575

Ensembl transcript IDs: ENST00000342228.7, ENST00000517366.1, ENST00000518660.5, ENST00000518717.1, ENST00000519463.1, ENST00000520179.5, ENST00000520262.6, ENST00000521455.1, ENST00000522401.1, ENST00000522707.1, ENST00000523340.1, ENST00000524211.1, ENST00000524237.1

Found 437 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCGGTGGCACTGCTGGTGGGAGCCACGGCGTGGCGCATGCTGGGTaGCGGTGTCACCGCCACACACTGCTCTGGGGCAGGCGTGATCAG +
Preference number: 1 (lower is better)
Translates to: GGGTAGGSHGVAHAG*RCHRHTLLWGRRDQ
Trigger: CTGATCACGCCTGCCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR CCA 90 bp ACTGCAAGGTGGGTGGGATCTGGGGTGTGGTGGCGGTGGCACTGCTaGTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCG +
Preference number: 1 (lower is better)
Translates to: TARWVGSGVWWRWHC*WEPRRGACWVTVSP
Trigger: CGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR CCA 90 bp GGAAAGGCCACTGCAAGGTGGGTGGGATCTGGGGTGTGGTGGCGGTaGCACTGCTGGTGGGAGCCACGGCGTGGCGCATGCTGGGTGACG +
Preference number: 1 (lower is better)
Translates to: GKATARWVGSGVWWR*HCWWEPRRGACWVT
Trigger: CGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGTGGCCTTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR GCA 90 bp GCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTaGTCTGGGGCAGGCGTGATCAGTGAGGGTGGGAGACAGACAATG +
Preference number: 1 (lower is better)
Translates to: ATAWRMLGDGVTATH*SGAGVISEGGRQTM
Trigger: CATTGTCTGTCTCCCACCCTCACTGATCACGCCTGCCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR TCA 90 bp CAGTGTGGGATGGAGCCTCCTGGAAGGGAGGCAGAGAGCTGGTCATaGGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCA +
Preference number: 1 (lower is better)
Translates to: QCGMEPPGREAESWS*ESRARPGCVCAARA
Trigger: TGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGCTCTCTGCCTCCCTTCCAGGAGGCTCCATCCCACACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR GCA 90 bp GGAGCCTCCTGGAAGGGAGGCAGAGAGCTGGTCATGAGAGAGCCGTaGACGGCCAGGATGTGTATGTGCGGCACGAGCACACATGTCTCC +
Preference number: 1 (lower is better)
Translates to: GASWKGGRELVMREP*TARMCMCGTSTHVS
Trigger: GGAGACATGTGTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGCTCTCTGCCTCCCTTCCAGGAGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR GCA 90 bp AGAGAGCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTaGGGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCAT +
Preference number: 1 (lower is better)
Translates to: RELVMREPCTARMCM*GTSTHVSHTPTPDH
Trigger: ATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGCTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR TCA 90 bp TGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCAGGCGTaGTCAGTGAGGGTGGGAGACAGACAATGTGAAAACGTAACACTG +
Preference number: 1 (lower is better)
Translates to: CWVTVSPPHTALGQA*SVRVGDRQCENVTL
Trigger: CAGTGTTACGTTTTCACATTGTCTGTCTCCCACCCTCACTGATCACGCCTGCCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR GCA 90 bp ACTTGTGAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCTCTaGAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAGTAT +
Preference number: 1 (lower is better)
Translates to: TCELPSRCHPTARDL*RVRLPVLKLITLQY
Trigger: ATACTGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTCACAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR GCA 90 bp CCGATTGCGACCAGTGAGAATCCTATAGTAGAACCCACAATGCAGTaGGTTCCTGAGATTGGAAGCCTCAGGAAGGAAGCAATCAGCTGC +
Preference number: 1 (lower is better)
Translates to: PIATSENPIVEPTMQ*VPEIGSLRKEAISC
Trigger: GCAGCTGATTGCTTCCTTCCTGAGGCTTCCAATCTCAGGAACGCACTGCATTGTGGGTTCTACTATAGGATTCTCACTGGTCGCAATCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
3UTR TCA 90 bp GAACCTCCTGCTGCAGGACTCTTCCTACAAGAGGATATGTCCTGTTaGAAGCAGAAGGTGGTAGAATTCCTCTCTAACCCTCTTCTCCCT +
Preference number: 1 (lower is better)
Translates to: EPPAAGLFLQEDMSC*KQKVVEFLSNPLLP
Trigger: AGGGAGAAGAGGGTTAGAGAGGAATTCTACCACCTTCTGCTTTCAACAGGACATATCCTCTTGTAGGAAGAGTCCTGCAGCAGGAGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
3UTR TCA 90 bp GAAATACTCCATCCAGCATCCAGGATTCTCCCTCCCTCTCATCCCTaGAGTGCTAGAATGTCAAAGCACAGAAAAAGCCTCCTTTGTGCT +
Preference number: 1 (lower is better)
Translates to: EILHPASRILPPSHP*SARMSKHRKSLLCA
Trigger: AGCACAAAGGAGGCTTTTTCTGTGCTTTGACATTCTAGCACTTCAGGGATGAGAGGGAGGGAGAATCCTGGATGCTGGATGGAGTATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR-3UTR TCA 90 bp CGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCAGGCGGCAGAGAGCTGGTCATaGGAGAGCCGTGCACGGCCA +
Preference number: 2 (lower is better)
Translates to: RGACWVTVSPPHTALGQAAESWS*ESRARP
Trigger: TGGCCGTGCACGGCTCTCTCATGACCAGCTCTCTGC...CGCCTGCCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR-3UTR TCA 90 bp CGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCAGGCGGTTAGCTCGGGAAGGTaGGTCTCCGCAGCCTGGGTG +
Preference number: 2 (lower is better)
Translates to: RGACWVTVSPPHTALGQAVSSGR*VSAAWV
Trigger: CACCCAGGCTGCGGAGACTCACCTTCCCGAGCTAAC...CGCCTGCCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR-3UTR TCA 90 bp GAAAGGCCACTGCAAGGTGGGTGGGATCTGGGGTGTGGTGGCGGTGGCACTGCTGTGGCGCATGCTGGGTaGCGGTGTCACCGCCACACA +
Preference number: 2 (lower is better)
Translates to: ERPLQGGWDLGCGGGGTAVAHAG*RCHRHT
Trigger: TGTGTGGCGGTGACACCGTCACCCAGCATGCGCCAC...AGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGTGGCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR-3UTR GCA 90 bp GAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGGTCATGAGAGAGCCGTaGACGGCCAGGATGTGTATG +
Preference number: 2 (lower is better)
Translates to: ELPSRCHPTARDLCRVRLVMREP*TARMCM
Trigger: CATACACATCCTGGCCGTGCACGGCTCTCTCATGAC...CAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR-3UTR TCA 90 bp CCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGGGGAGACAGACAATGTaGAAACGTAACACTGGCCAA +
Preference number: 2 (lower is better)
Translates to: PRRGACWVTVSPPHTALGGRQTM*KRNTGQ
Trigger: TTGGCCAGTGTTACGTTTTCACATTGTCTGTCTCCC...CCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR-3UTR GCA 90 bp TTCAGTGAAAGCACTTGTGAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACGTCATGAGAGAGCCGTaGACGGCCAGGATGTGTATG +
Preference number: 2 (lower is better)
Translates to: FSESTCELPSRCHPTARDVMREP*TARMCM
Trigger: CATACACATCCTGGCCGTGCACGGCTCTCTCATGAC...GTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTCACAAGTGCTTTCACTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR-3UTR CCA 90 bp GCGGTGGCACTGCTGGTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCATTCCCCTGCTTCTTTaGTACTTTCCAAAATTCTCT +
Preference number: 2 (lower is better)
Translates to: AVALLVGATAWRMLGDGVIPLLL*YFPKFS
Trigger: AGAGAATTTTGGAAAGTACCAAAGAAGCAGGGGAAT...GACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR-3UTR CCA 90 bp GTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCATTCCCCTGCTTCTTTaGTACTTTCCAAAATTCTCT +
Preference number: 2 (lower is better)
Translates to: VGATAWRMLGDGVTATHCIPLLL*YFPKFS
Trigger: AGAGAATTTTGGAAAGTACCAAAGAAGCAGGGGAAT...GCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR-3UTR CCA 90 bp CTCCCTCTCATCCCTGAAGTGCTAGAATGTCAAAGCACAGAAAAAGCCTCCTTTCGGTGGCACTGCTGGTaGGAGCCACGGCGTGGCGCA +
Preference number: 2 (lower is better)
Translates to: LPLIPEVLECQSTEKASFRWHCW*EPRRGA
Trigger: TGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCG...AAAGGAGGCTTTTTCTGTGCTTTGACATTCTAGCACTTCAGGGATGAGAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR-3UTR GCA 90 bp CTCCCTCTCATCCCTGAAGTGCTAGAATGTCAAAGCACAGAAAAAGCCTCCTTTCCACGGCGTGGCGCATaGTGGGTGACGGTGTCACCG +
Preference number: 2 (lower is better)
Translates to: LPLIPEVLECQSTEKASFPRRGA*WVTVSP
Trigger: CGGTGACACCGTCACCCAGCATGCGCCACGCCGTGG...AAAGGAGGCTTTTTCTGTGCTTTGACATTCTAGCACTTCAGGGATGAGAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR CAA 90 bp CCGTCCCGCTGTCATCCCACAGCACGCGACCTCTGCAGGGTCAGGTaGCCTGTTCTGAAGCTCATTACCTTACAGTATATTAGAAGGCAA +
Preference number: 2 (lower is better)
Translates to: PSRCHPTARDLCRVR*PVLKLITLQYIRRQ
Trigger: TTGCCTTCTAATATACTGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATGACAGCGGGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR-3UTR GCA 90 bp TGGAGACAAGGATCCGTTCTTCAGGCTGCAGGGAGAATTGGGATAGAAACTGACACAGCACGCGACCTCTaGAGGGTCAGGTTGCCTGTT +
Preference number: 2 (lower is better)
Translates to: WRQGSVLQAAGRIGIETDTARDL*RVRLPV
Trigger: AACAGGCAACCTGACCCTGCAGAGGTCGCGTGCTGT...GTCAGTTTCTATCCCAATTCTCCCTGCAGCCTGAAGAACGGATCCTTGTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR-3UTR GCA 90 bp TGGAGACAAGGATCCGTTCTTCAGGCTGCAGGGAGAATTGGGATAGAAACTGACGCCAGGATGTGTATGTaGGGCACGAGCACACATGTC +
Preference number: 2 (lower is better)
Translates to: WRQGSVLQAAGRIGIETDARMCM*GTSTHV
Trigger: GACATGTGTGCTCGTGCCGCACATACACATCCTGGC...GTCAGTTTCTATCCCAATTCTCCCTGCAGCCTGAAGAACGGATCCTTGTCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR-3UTR GCA 90 bp CCTATAGTAGAACCCACAATGCAGTGCGTTCCTGAGATTGGAAGCCTCAGGAAGAGCGGAACCTCCTGCTaGAGGACTCTTCCTACAAGA +
Preference number: 2 (lower is better)
Translates to: PIVEPTMQCVPEIGSLRKSGTSC*RTLPTR
Trigger: TCTTGTAGGAAGAGTCCTGCAGCAGGAGGTTCCGCT...CTTCCTGAGGCTTCCAATCTCAGGAACGCACTGCATTGTGGGTTCTACTATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
3UTR-3UTR CCA 90 bp GACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAGTATATTGTGAACAGTGTGGGATaGAGCCTCCTGGAAGGGAGG +
Preference number: 2 (lower is better)
Translates to: DLCRVRLPVLKLITLQYIVNSVG*SLLEGR
Trigger: CCTCCCTTCCAGGAGGCTCCATCCCACACTGTTCAC...AATATACTGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR-3UTR GCA 90 bp TTGGTACCGATTGCGACCAGTGAGAATCCTATAGTAGAACCCACAATGCAGTGCAAGGAAGCAATCAGCTaGCACACAGCGGAACCTCCT +
Preference number: 2 (lower is better)
Translates to: LVPIATSENPIVEPTMQCKEAIS*HTAEPP
Trigger: AGGAGGTTCCGCTGTGTGGCAGCTGATTGCTTCCTT...GCACTGCATTGTGGGTTCTACTATAGGATTCTCACTGGTCGCAATCGGTACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
3UTR CAA 90 bp AACCAAGAAGCAACAATCTTGACAAGCTCCATCCACTGCACACCTTaGGTACCGATTGCGACCAGTGAGAATCCTATAGTAGAACCCACA +
Preference number: 2 (lower is better)
Translates to: NQEATILTSSIHCTP*VPIATSENPIVEPT
Trigger: TGTGGGTTCTACTATAGGATTCTCACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAAGATTGTTGCTTCTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
3UTR-3UTR TCA 90 bp TCCACTCCCAACTTGAATATGTTTGAAATAATGCTGCCTATTCTATGGATACAAGTTAGCTCGGGAAGGTaGGTCTCCGCAGCCTGGGTG +
Preference number: 2 (lower is better)
Translates to: STPNLNMFEIMLPILWIQVSSGR*VSAAWV
Trigger: CACCCAGGCTGCGGAGACTCACCTTCCCGAGCTAAC...TTGTATCCATAGAATAGGCAGCATTATTTCAAACATATTCAAGTTGGGAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR-3UTR GCA 90 bp CTCCCTCTCATCCCTGAAGTGCTAGAATGTCAAAGCACAGAAAAAGCCTCCTTTATCCGTTCTTCAGGCTaGAGGGAGAATTGGGATAGA +
Preference number: 2 (lower is better)
Translates to: LPLIPEVLECQSTEKASFIRSSG*RENWDR
Trigger: TCTATCCCAATTCTCCCTGCAGCCTGAAGAACGGAT...AAAGGAGGCTTTTTCTGTGCTTTGACATTCTAGCACTTCAGGGATGAGAGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR CCA 72 bp TGGGTGGGATCTGGGGTGTGGTGGCGGTGGCACTGCTaGTGGGAGCCACGGCGTGGCGCATGCTGGGTGACG +
Preference number: 3 (lower is better)
Translates to: WVGSGVWWRWHC*WEPRRGACWVT
Trigger: CGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCGCCACCACACCCCAGATCCCACCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR TCA 72 bp ACTGCTGGTGGGAGCCACGGCGTGGCGCATGCTGGGTaGCGGTGTCACCGCCACACACTGCTCTGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: TAGGSHGVAHAG*RCHRHTLLWGR
Trigger: CCTGCCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR GCA 72 bp CGGTGGCACTGCTGGTGGGAGCCACGGCGTGGCGCATaGTGGGTGACGGTGTCACCGCCACACACTGCTCTG +
Preference number: 3 (lower is better)
Translates to: RWHCWWEPRRGA*WVTVSPPHTAL
Trigger: CAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR CCA 72 bp TGGCACTGCTGGTGGGAGCCACGGCGTGGCGCATGCTaGGTGACGGTGTCACCGCCACACACTGCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: WHCWWEPRRGAC*VTVSPPHTALG
Trigger: CCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR CCA 72 bp ACTGCAAGGTGGGTGGGATCTGGGGTGTGGTGGCGGTaGCACTGCTGGTGGGAGCCACGGCGTGGCGCATGC +
Preference number: 3 (lower is better)
Translates to: TARWVGSGVWWR*HCWWEPRRGAC
Trigger: GCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR CCA 72 bp AAGGCCACTGCAAGGTGGGTGGGATCTGGGGTGTGGTaGCGGTGGCACTGCTGGTGGGAGCCACGGCGTGGC +
Preference number: 3 (lower is better)
Translates to: KATARWVGSGVW*RWHCWWEPRRG
Trigger: GCCACGCCGTGGCTCCCACCAGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGTGGCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR GCA 72 bp TGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTaGTCTGGGGCAGGCGTGATCAGTGAGGGTGGGAGA +
Preference number: 3 (lower is better)
Translates to: WRMLGDGVTATH*SGAGVISEGGR
Trigger: TCTCCCACCCTCACTGATCACGCCTGCCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR GCA 72 bp TGGAAGGGAGGCAGAGAGCTGGTCATGAGAGAGCCGTaGACGGCCAGGATGTGTATGTGCGGCACGAGCACA +
Preference number: 3 (lower is better)
Translates to: WKGGRELVMREP*TARMCMCGTST
Trigger: TGTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGCTCTCTGCCTCCCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR GCA 72 bp CTCCCGTCCCGCTGTCATCCCACAGCACGCGACCTCTaGAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACC +
Preference number: 3 (lower is better)
Translates to: LPSRCHPTARDL*RVRLPVLKLIT
Trigger: GGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATGACAGCGGGACGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR GCA 72 bp GTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTaGGGCACGAGCACACATGTCTCCCACACGCCAACA +
Preference number: 3 (lower is better)
Translates to: VMREPCTARMCM*GTSTHVSHTPT
Trigger: TGTTGGCGTGTGGGAGACATGTGTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR TCA 72 bp CATCCACTGCACACCTTTGGTACCGATTGCGACCAGTaGGAATCCTATAGTAGAACCCACAATGCAGTGCGT +
Preference number: 3 (lower is better)
Translates to: HPLHTFGTDCDQ*ESYSRTHNAVR
Trigger: ACGCACTGCATTGTGGGTTCTACTATAGGATTCTCACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
3UTR TCA 72 bp CAGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTaGAGCTCATTACCTTACAGTATATTAGAAGGCAAA +
Preference number: 3 (lower is better)
Translates to: QHATSAGSGCLF*SSLPYSILEGK
Trigger: TTTGCCTTCTAATATACTGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR GCA 72 bp ACCAGTGAGAATCCTATAGTAGAACCCACAATGCAGTaGGTTCCTGAGATTGGAAGCCTCAGGAAGGAAGCA +
Preference number: 3 (lower is better)
Translates to: TSENPIVEPTMQ*VPEIGSLRKEA
Trigger: TGCTTCCTTCCTGAGGCTTCCAATCTCAGGAACGCACTGCATTGTGGGTTCTACTATAGGATTCTCACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
3UTR-3UTR CAA 90 bp CTCCCTCTCATCCCTGAAGTGCTAGAATGTCAAAGCACAGAAAAAGCCTCCTTTAAACTGACTCTGGACTaGACATGTAGTGCTCAGCCA +
Preference number: 3 (lower is better)
Translates to: LPLIPEVLECQSTEKASFKLTLD*TCSAQP
Trigger: TGGCTGAGCACTACATGTCAAGTCCAGAGTCAGTTT...AAAGGAGGCTTTTTCTGTGCTTTGACATTCTAGCACTTCAGGGATGAGAGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR TCA 72 bp GCTGCAGGACTCTTCCTACAAGAGGATATGTCCTGTTaGAAGCAGAAGGTGGTAGAATTCCTCTCTAACCCT +
Preference number: 3 (lower is better)
Translates to: AAGLFLQEDMSC*KQKVVEFLSNP
Trigger: AGGGTTAGAGAGGAATTCTACCACCTTCTGCTTTCAACAGGACATATCCTCTTGTAGGAAGAGTCCTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
3UTR GCA 72 bp AACCAAGAAGCAACAATCTTGACAAGCTCCATCCACTaGACACCTTTGGTACCGATTGCGACCAGTGAGAAT +
Preference number: 3 (lower is better)
Translates to: NQEATILTSSIH*TPLVPIATSEN
Trigger: ATTCTCACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAAGATTGTTGCTTCTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR GCA 90 bp CGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCAGGCGGGCGTCGCGTGGAGCTaGGAGTCGCCCGCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: RGACWVTVSPPHTALGQAGVAWS*ESPASG
Trigger: TCCGGAAGCGGGCGACTCGCAGCTCCACGCGACGCC...CGCCTGCCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342228.7
CDS-3UTR GCA 90 bp GCGGTGGCACTGCTGGTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCCAGCCCGAGGGTGGCTaGCCGCAGAAGTGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: AVALLVGATAWRMLGDGVQPEGG*PQKCLP
Trigger: CGGAAGGCACTTCTGCGGGCAGCCACCCTCGGGCTG...GACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp CCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGGGGTCCTCTCGCGGCTaGTCAGGGTCGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PRRGACWVTVSPPHTALGGSSRG*SGSASS
Trigger: GGAGCTGGCCGACCCTGACCAGCCGCGAGAGGACCC...CCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGG
71% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCGGTGGCACTGCTGGTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCGCCAGTCCACAGCCTTaGGGGAGCGGATCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: AVALLVGATAWRMLGDGVASPQP*GSGSSP
Trigger: TGGGCTGGATCCGCTCCCGCAAGGCTGTGGACTGGC...GACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp CGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCAGGCGCCACGGCGTGGCGCATaGTGGGTGACGGTGTCACCG +
Preference number: 4 (lower is better)
Translates to: RGACWVTVSPPHTALGQAPRRGA*WVTVSP
Trigger: CGGTGACACCGTCACCCAGCATGCGCCACGCCGTGG...CGCCTGCCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp CGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCAGGCGGGGGTGTGGTGGCGGTaGCACTGCTGGTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: RGACWVTVSPPHTALGQAGVWWR*HCWWEP
Trigger: TGGCTCCCACCAGCAGTGCCACCGCCACCACACCCC...CGCCTGCCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp CCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGGTGGCGCATGCTGGGTaGCGGTGTCACCGCCACACA +
Preference number: 4 (lower is better)
Translates to: PRRGACWVTVSPPHTALGVAHAG*RCHRHT
Trigger: TGTGTGGCGGTGACACCGTCACCCAGCATGCGCCAC...CCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGCCCTCGGTCCCGTaGGGTCCCCGAAACTCCGAG +
Preference number: 4 (lower is better)
Translates to: WEPRRGACWVTVSPPHTALPSVP*GPRNSE
Trigger: CTCGGAGTTTCGGGGACCGCACGGGACCGAGGGCAG...AGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342228.7
CDS-3UTR GCA 90 bp GTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCCCCCAGTGTCTCCCCTaGTGCTCCCGTGAGCGGGAT +
Preference number: 4 (lower is better)
Translates to: VGATAWRMLGDGVTATHCPQCLP*CSRERD
Trigger: ATCCCGCTCACGGGAGCAGCAGGGGAGACACTGGGG...GCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp CCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGGGCTGCCCGCAGAAGTaGCTTCCGAGGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PRRGACWVTVSPPHTALGGCPQK*LPRSPV
Trigger: CACTGGGGACCTCGGAAGGCACTTCTGCGGGCAGCC...CCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCGGTGGCACTGCTGGTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCGTCACCGCCACACACTaGTCTGGGGCAGGCGTGATC +
Preference number: 4 (lower is better)
Translates to: AVALLVGATAWRMLGDGVVTATH*SGAGVI
Trigger: GATCACGCCTGCCCCAGAGCAGTGTGTGGCGGTGAC...GACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCCACGGCGTGGCGCATaGTGGGTGACGGTGTCACCG +
Preference number: 4 (lower is better)
Translates to: WEPRRGACWVTVSPPHTAPRRGA*WVTVSP
Trigger: CGGTGACACCGTCACCCAGCATGCGCCACGCCGTGG...AGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GTCTCCGCAGCCTGGGTGAACAGTGTGGGATGGAGCCTCCTGGAAGGGAGGCAGCCCCTCGGCGTCGCGTaGAGCTGCGAGTCGCCCGCT +
Preference number: 4 (lower is better)
Translates to: VSAAWVNSVGWSLLEGRQPLGVA*SCESPA
Trigger: AGCGGGCGACTCGCAGCTCCACGCGACGCCGAGGGG...CTGCCTCCCTTCCAGGAGGCTCCATCCCACACTGTTCACCCAGGCTGCGGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342228.7
CDS-3UTR CCA 90 bp GCGGTGGCACTGCTGGTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCCATGACCGTCGCTCCTaGTGTGGCCGTCGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: AVALLVGATAWRMLGDGVHDRRS*CGRRSR
Trigger: TCGGCTTCGACGGCCACACCAGGAGCGACGGTCATG...GACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp CCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCCGCAGCTCGAAAGGTaGCGTGCACTGGCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: PRRGACWVTVSPPHTALGPQLER*RALAAH
Trigger: GTGGGCTGCCAGTGCACGCCACCTTTCGAGCTGCGG...CCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCCTCCTGGAAGGGAGGCAGAGAGCTGGTCATGAGAGAGCCGTGCACGGCCAGGTGGCGGTGGCACTGCTaGTGGGAGCCACGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: ASWKGGRELVMREPCTARWRWHC*WEPRRG
Trigger: GCCACGCCGTGGCTCCCACCAGCAGTGCCACCGCCA...CCTGGCCGTGCACGGCTCTCTCATGACCAGCTCTCTGCCTCCCTTCCAGGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp CCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGGGATCTGGGGTGTGGTaGCGGTGGCACTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PRRGACWVTVSPPHTALGGSGVW*RWHCWW
Trigger: CCACCAGCAGTGCCACCGCCACCACACCCCAGATCC...CCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCCAGTGTCTCCCCTGCTaGTCCCGTGAGCGGGATGGT +
Preference number: 4 (lower is better)
Translates to: VGATAWRMLGDGVTATHCQCLPC*SRERDG
Trigger: ACCATCCCGCTCACGGGAGCAGCAGGGGAGACACTG...GCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp CGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCAGGCGCAGTGCTCTTCCGTATaGAGCCCGAGGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RGACWVTVSPPHTALGQAQCSSV*SPRVAA
Trigger: GGCAGCCACCCTCGGGCTGCATACGGAAGAGCACTG...CGCCTGCCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp TGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCCGTCGCTCCTGGTGTaGCCGTCGAAGCCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: WEPRRGACWVTVSPPHTAPSLLV*PSKPKV
Trigger: CACCTTCGGCTTCGACGGCCACACCAGGAGCGACGG...AGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCACGGTGTGGTACACATaGCCGTCGCTCCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: VGATAWRMLGDGVTATHCTVWYT*PSLLVW
Trigger: CCACACCAGGAGCGACGGTCATGTGTACCACACCGT...GCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp CGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCAGGCGAGGCGATCACCACTGTaGAGGCTGAGGCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: RGACWVTVSPPHTALGQARRSPL*RLRPAR
Trigger: TCGAGCTGGCCTCAGCCTTCACAGTGGTGATCGCCT...CGCCTGCCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCCTCCTGGAAGGGAGGCAGAGAGCTGGTCATGAGAGAGCCGTGCACGGCCAGGGGCTGCCCGCAGAAGTaGCTTCCGAGGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: ASWKGGRELVMREPCTARGCPQK*LPRSPV
Trigger: CACTGGGGACCTCGGAAGGCACTTCTGCGGGCAGCC...CCTGGCCGTGCACGGCTCTCTCATGACCAGCTCTCTGCCTCCCTTCCAGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCGGTGGCACTGCTGGTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCGAGGTGAACCTCGGGTaGGTCCTTCTCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: AVALLVGATAWRMLGDGVEVNLG*VLLLLL
Trigger: GAGAAGGAGGAGAAGGACGCACCCGAGGTTCACCTC...GACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp CCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCCAGACGGGTGTAGCTaGTTCTTGCGTTACCCCGCC +
Preference number: 4 (lower is better)
Translates to: PRRGACWVTVSPPHTALGPDGCS*FLRYPA
Trigger: GGCGGGGTAACGCAAGAAGCAGCTACACCCGTCTGG...CCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCACGGGTCCTCTCGCGGCTaGTCAGGGTCGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AGHERAVHGQDVYVRHEHGSSRG*SGSASS
Trigger: GGAGCTGGCCGACCCTGACCAGCCGCGAGAGGACCC...GTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp CGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCAGGCGGTGCGTGGTGCTGACTaGAAGCCCGATGTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RGACWVTVSPPHTALGQAVRGAD*KPDVGG
Trigger: GCCTCCAACATCGGGCTTCCAGTCAGCACCACGCAC...CGCCTGCCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GAAAGGCCACTGCAAGGTGGGTGGGATCTGGGGTGTGGTGGCGGTGGCACTGCTCGGCGTGGCGCATGCTaGGTGACGGTGTCACCGCCA +
Preference number: 4 (lower is better)
Translates to: ERPLQGGWDLGCGGGGTARRGAC*VTVSPP
Trigger: TGGCGGTGACACCGTCACCCAGCATGCGCCACGCCG...AGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGTGGCCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GAAAGGCCACTGCAAGGTGGGTGGGATCTGGGGTGTGGTGGCGGTGGCACTGCTGTGGGAGCCACGGCGTaGCGCATGCTGGGTGACGGT +
Preference number: 4 (lower is better)
Translates to: ERPLQGGWDLGCGGGGTAVGATA*RMLGDG
Trigger: ACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC...AGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGTGGCCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGGCAGAGAGCTGGTCATaGGAGAGCCGTGCACGGCCA +
Preference number: 4 (lower is better)
Translates to: ELPSRCHPTARDLCRVRLAESWS*ESRARP
Trigger: TGGCCGTGCACGGCTCTCTCATGACCAGCTCTCTGC...CAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp CCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGGGCAGGCGTGATCAGTaGGGGTGGGAGACAGACAAT +
Preference number: 4 (lower is better)
Translates to: PRRGACWVTVSPPHTALGGRRDQ*GWETDN
Trigger: ATTGTCTGTCTCCCACCCTCACTGATCACGCCTGCC...CCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp CCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCGTCGAAGCCGAAGGTaGCGTTGGAGATGGGCGATT +
Preference number: 4 (lower is better)
Translates to: PRRGACWVTVSPPHTALGRRSRR*RWRWAI
Trigger: AATCGCCCATCTCCAACGGCACCTTCGGCTTCGACG...CCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp CGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCAGGCGGTGAACAGTGTGGGATaGAGCCTCCTGGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RGACWVTVSPPHTALGQAVNSVG*SLLEGR
Trigger: CCTCCCTTCCAGGAGGCTCCATCCCACACTGTTCAC...CGCCTGCCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCAAATGGAACAGGAGGTaGACCTCGGGTGCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: VGATAWRMLGDGVTATHCKWNRR*TSGASF
Trigger: GAAGGACGCACCCGAGGTTCACCTCCTGTTCCATTT...GCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp TGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTACGTCATTGCCGCCGTaGGCAAAGGACCCGAAACAG +
Preference number: 4 (lower is better)
Translates to: WEPRRGACWVTVSPPHTATSLPP*AKDPKQ
Trigger: CTGTTTCGGGTCCTTTGCTCACGGCGGCAATGACGT...AGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCACGCTCTGGGGCAGGCGTaGTCAGTGAGGGTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: AGHERAVHGQDVYVRHEHALGQA*SVRVGD
Trigger: GTCTCCCACCCTCACTGATCACGCCTGCCCCAGAGC...GTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTGCAGCAGCCGGTAGTTaGTTTCCTGGGCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: WEPRRGACWVTVSPPHTAAAAGS*FPGLAS
Trigger: AGAAGCCAGCCCAGGAAAGCAACTACCGGCTGCTGC...AGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCGGTGGCACTGCTGGTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCCAGCCCACAAATGGCTaGGGTGTAGCAGGTGTAACT +
Preference number: 4 (lower is better)
Translates to: AVALLVGATAWRMLGDGVQPTNG*GVAGVT
Trigger: AGTTACACCTGCTACACCGCAGCCATTTGTGGGCTG...GACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCGCCAGGATGTGTATGTaGGGCACGAGCACACATGTC +
Preference number: 4 (lower is better)
Translates to: VGATAWRMLGDGVTATHCARMCM*GTSTHV
Trigger: GACATGTGTGCTCGTGCCGCACATACACATCCTGGC...GCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp CCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGGTCATGAGAGAGCCGTaGACGGCCAGGATGTGTATG +
Preference number: 4 (lower is better)
Translates to: PRRGACWVTVSPPHTALGVMREP*TARMCM
Trigger: CATACACATCCTGGCCGTGCACGGCTCTCTCATGAC...CCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTACAGCACGCGACCTCTaGAGGGTCAGGTTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: WEPRRGACWVTVSPPHTATARDL*RVRLPV
Trigger: AACAGGCAACCTGACCCTGCAGAGGTCGCGTGCTGT...AGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GAAAGGCCACTGCAAGGTGGGTGGGATCTGGGGTGTGGTGGCGGTGGCACTGCTGTCACCGCCACACACTaGTCTGGGGCAGGCGTGATC +
Preference number: 4 (lower is better)
Translates to: ERPLQGGWDLGCGGGGTAVTATH*SGAGVI
Trigger: GATCACGCCTGCCCCAGAGCAGTGTGTGGCGGTGAC...AGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGTGGCCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp TGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGCAGCCCACAAATaGCTGCGGTGTAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: WEPRRGACWVTVSPPHTALAAHK*LRCSRC
Trigger: ACACCTGCTACACCGCAGCCATTTGTGGGCTGCCAG...AGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GCCTCCTGGAAGGGAGGCAGAGAGCTGGTCATGAGAGAGCCGTGCACGGCCAGGACCCGAAACAGGCGGTaGGGACCTGCAGGAAATGGA +
Preference number: 4 (lower is better)
Translates to: ASWKGGRELVMREPCTARTRNRR*GPAGNG
Trigger: TCCATTTCCTGCAGGTCCTCACCGCCTGTTTCGGGT...CCTGGCCGTGCACGGCTCTCTCATGACCAGCTCTCTGCCTCCCTTCCAGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGTACAGTGCGTGGTGCTaGCTGGAAGCCCGATGTTGG +
Preference number: 4 (lower is better)
Translates to: ELPSRCHPTARDLCRVRLYSAWC*LEARCW
Trigger: CCAACATCGGGCTTCCAGTCAGCACCACGCACTGTA...CAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCACGTTAGCTCGGGAAGGTaGGTCTCCGCAGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AGHERAVHGQDVYVRHEHVSSGR*VSAAWV
Trigger: CACCCAGGCTGCGGAGACTCACCTTCCCGAGCTAAC...GTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GCGGTGGCACTGCTGGTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCCGTAACACTGGCCAATaGTTCCCCTGCTTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: AVALLVGATAWRMLGDGVRNTGQ*FPCFFG
Trigger: ACCAAAGAAGCAGGGGAATCATTGGCCAGTGTTACG...GACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCATAGAATACTGGGAGTaGCCGGAGGCCATTGGGAAC +
Preference number: 4 (lower is better)
Translates to: VGATAWRMLGDGVTATHCIEYWE*PEAIGN
Trigger: GTTCCCAATGGCCTCCGGGCACTCCCAGTATTCTAT...GCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCAGACCCAGAGGCCTGTaGAGATTCCAACTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: VGATAWRMLGDGVTATHCRPRGL*RFQLLH
Trigger: ATGGAGGAGTTGGAATCTGCACAGGCCTCTGGGTCT...GCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp CCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCATCCATGGCCATTTTaGAAAGTGGGTGCCGGGTAC +
Preference number: 4 (lower is better)
Translates to: PRRGACWVTVSPPHTALGHPWPF*KVGAGY
Trigger: GTACCCGGCACCCACTTTCCAAAATGGCCATGGATG...CCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCGGTGGCACTGCTGGTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCAACAAGGCCGAGCACTaGTGCTCCTGTGTACATGAT +
Preference number: 4 (lower is better)
Translates to: AVALLVGATAWRMLGDGVNKAEH*CSCVHD
Trigger: ATCATGTACACAGGAGCACCAGTGCTCGGCCTTGTT...GACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GTCTCCGCAGCCTGGGTGAACAGTGTGGGATGGAGCCTCCTGGAAGGGAGGCAGGGGCTATGGCCCACATaGGGAGAACAAGGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: VSAAWVNSVGWSLLEGRQGLWPT*GEQGRA
Trigger: TGCTCGGCCTTGTTCTCCCCATGTGGGCCATAGCCC...CTGCCTCCCTTCCAGGAGGCTCCATCCCACACTGTTCACCCAGGCTGCGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCAGGTGCCGTTGGAGATaGGCGATTTCACAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: VGATAWRMLGDGVTATHCRCRWR*AISQSH
Trigger: ATGGCTCTGTGAAATCGCCCATCTCCAACGGCACCT...GCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCACGTTGCTTTCCTGGGCTaGCTTCTCCTCGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: AGHERAVHGQDVYVRHEHVAFLG*LLLGAP
Trigger: AGGGGCCCCGAGGAGAAGCCAGCCCAGGAAAGCAAC...GTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGCTGGCAGCCCACAAATaGCTGCGGTGTAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: ELPSRCHPTARDLCRVRLLAAHK*LRCSRC
Trigger: ACACCTGCTACACCGCAGCCATTTGTGGGCTGCCAG...CAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp CATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTCGGTGGCACTGCTGGTaGGAGCCACGGCGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: HPTARDLCRVRLPVLKLIRWHCW*EPRRGA
Trigger: TGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCG...AATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp CCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCGTAACACTGGCCAATaGTTCCCCTGCTTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PRRGACWVTVSPPHTALGRNTGQ*FPCFFG
Trigger: ACCAAAGAAGCAGGGGAATCATTGGCCAGTGTTACG...CCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp CGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCAGGCGCCTCCCTCTCATCCCTaGAGTGCTAGAATGTCAAAG +
Preference number: 4 (lower is better)
Translates to: RGACWVTVSPPHTALGQAPPSHP*SARMSK
Trigger: CTTTGACATTCTAGCACTTCAGGGATGAGAGGGAGG...CGCCTGCCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp CATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTCAGCCCGAGGGTGGCTaGCCGCAGAAGTGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: HPTARDLCRVRLPVLKLIQPEGG*PQKCLP
Trigger: CGGAAGGCACTTCTGCGGGCAGCCACCCTCGGGCTG...AATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCATTACTCACGTCATTaGCGCCGTGAGCAAAGGACC +
Preference number: 4 (lower is better)
Translates to: WEPRRGACWVTVSPPHTAHYSRH*RREQRT
Trigger: GGTCCTTTGCTCACGGCGGCAATGACGTGAGTAATG...AGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTGGTGTAGCTGCTTCTTaGGTTACCCCGCCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: WEPRRGACWVTVSPPHTAGVAAS*VTPPCL
Trigger: CAAACAAGGCGGGGTAACGCAAGAAGCAGCTACACC...AGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCGGTGGCACTGCTGGTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCATCCGTTCTTCAGGCTaGAGGGAGAATTGGGATAGA +
Preference number: 4 (lower is better)
Translates to: AVALLVGATAWRMLGDGVIRSSG*RENWDR
Trigger: TCTATCCCAATTCTCCCTGCAGCCTGAAGAACGGAT...GACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCAACAAGGCCGAGCACTaGTGCTCCTGTGTACATGAT +
Preference number: 4 (lower is better)
Translates to: VGATAWRMLGDGVTATHCNKAEH*CSCVHD
Trigger: ATCATGTACACAGGAGCACCAGTGCTCGGCCTTGTT...GCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp TGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTAGGTGCCGTTGGAGATaGGCGATTTCACAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: WEPRRGACWVTVSPPHTARCRWR*AISQSH
Trigger: ATGGCTCTGTGAAATCGCCCATCTCCAACGGCACCT...AGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GATGTGTATGTGCGGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCACGGCGTGGCGCATGCTaGGTGACGGTGTCACCGCCA +
Preference number: 4 (lower is better)
Translates to: DVYVRHEHTCLPHANTRPRRGAC*VTVSPP
Trigger: TGGCGGTGACACCGTCACCCAGCATGCGCCACGCCG...TGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCCGCACATACACATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTTGCAGCTGGCGGTGGCACTGCTaGTGGGAGCCACGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: AHMSPTRQHQTIPLAVCSWRWHC*WEPRRG
Trigger: GCCACGCCGTGGCTCCCACCAGCAGTGCCACCGCCA...GCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCCTTCCTGAACCTTACTaGGGCTTTCGTCAGATACTC +
Preference number: 4 (lower is better)
Translates to: VGATAWRMLGDGVTATHCLPEPY*GFRQIL
Trigger: GAGTATCTGACGAAAGCCTCAGTAAGGTTCAGGAAG...GCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCACGGCAGGCGTGATCAGTaGGGGTGGGAGACAGACAAT +
Preference number: 4 (lower is better)
Translates to: AGHERAVHGQDVYVRHEHGRRDQ*GWETDN
Trigger: ATTGTCTGTCTCCCACCCTCACTGATCACGCCTGCC...GTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTGTGGCGCATGCTGGGTaGCGGTGTCACCGCCACACA +
Preference number: 4 (lower is better)
Translates to: GTSTHVSHTPTPDHPFSCVAHAG*RCHRHT
Trigger: TGTGTGGCGGTGACACCGTCACCCAGCATGCGCCAC...ACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCGGTGGCACTGCTGGTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCGGACAAACTGCTAGCTaGTGGTTTGCAAACTACTGT +
Preference number: 4 (lower is better)
Translates to: AVALLVGATAWRMLGDGVGQTAS*WFANYC
Trigger: ACAGTAGTTTGCAAACCAGCAGCTAGCAGTTTGTCC...GACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TTCAGTGAAAGCACTTGTGAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCAGTGTCTCCCCTGCTaGTCCCGTGAGCGGGATGGT +
Preference number: 4 (lower is better)
Translates to: FSESTCELPSRCHPTARDQCLPC*SRERDG
Trigger: ACCATCCCGCTCACGGGAGCAGCAGGGGAGACACTG...GTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTCACAAGTGCTTTCACTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTCCCCAGTGTCTCCCCTaGTGCTCCCGTGAGCGGGAT +
Preference number: 4 (lower is better)
Translates to: GTSTHVSHTPTPDHPFSCPQCLP*CSRERD
Trigger: ATCCCGCTCACGGGAGCAGCAGGGGAGACACTGGGG...ACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GAAAGGCCACTGCAAGGTGGGTGGGATCTGGGGTGTGGTGGCGGTGGCACTGCTATGGGTCATGGACAGTaGTCTTCCGTATGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: ERPLQGGWDLGCGGGGTAMGHGQ*SSVCSP
Trigger: CGGGCTGCATACGGAAGAGCACTGTCCATGACCCAT...AGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGTGGCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGCATTACTCACGTCATTaGCGCCGTGAGCAAAGGACC +
Preference number: 4 (lower is better)
Translates to: ELPSRCHPTARDLCRVRLHYSRH*RREQRT
Trigger: GGTCCTTTGCTCACGGCGGCAATGACGTGAGTAATG...CAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGAGACCCAGAGGCCTGTaGAGATTCCAACTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: ELPSRCHPTARDLCRVRLRPRGL*RFQLLH
Trigger: ATGGAGGAGTTGGAATCTGCACAGGCCTCTGGGTCT...CAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp CATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTGCCAGTCCACAGCCTTaGGGGAGCGGATCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: HPTARDLCRVRLPVLKLIASPQP*GSGSSP
Trigger: TGGGCTGGATCCGCTCCCGCAAGGCTGTGGACTGGC...AATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGCAGAGCCATGGGTCATaGACAGTGCTCTTCCGTATG +
Preference number: 4 (lower is better)
Translates to: ELPSRCHPTARDLCRVRLQSHGS*TVLFRM
Trigger: CATACGGAAGAGCACTGTCCATGACCCATGGCTCTG...CAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCACAGCGCAGCCTCTTCTTaGAGTAGGACACGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: AGHERAVHGQDVYVRHEHSAASS*SRTRCR
Trigger: GCGACACCGTGTCCTACTCCAAGAAGAGGCTGCGCT...GTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGCTACCAGGGGACCGATaGCATTACTCACGTCATTGC +
Preference number: 4 (lower is better)
Translates to: ELPSRCHPTARDLCRVRLLPGDR*HYSRHC
Trigger: GCAATGACGTGAGTAATGCCATCGGTCCCCTGGTAG...CAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp TTCAGTGAAAGCACTTGTGAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCCACTGCAAGGTGGGTaGGATCTGGGGTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: FSESTCELPSRCHPTARDPLQGG*DLGCGG
Trigger: GCCACCACACCCCAGATCCCACCCACCTTGCAGTGG...GTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTCACAAGTGCTTTCACTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GAAAGGCCACTGCAAGGTGGGTGGGATCTGGGGTGTGGTGGCGGTGGCACTGCTGAGACTCCAATGGGATaGAGTAGAGCCTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: ERPLQGGWDLGCGGGGTAETPMG*SRAWGC
Trigger: ACACCCCCAGGCTCTACTCCATCCCATTGGAGTCTC...AGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGTGGCCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCACGGGGACTCTGCTTCCTaGACCTTACTGAGGCTTTCG +
Preference number: 4 (lower is better)
Translates to: AGHERAVHGQDVYVRHEHGDSAS*TLLRLS
Trigger: CGAAAGCCTCAGTAAGGTTCAGGAAGCAGAGTCCCC...GTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTGTCCTCTGGGGCCGATaGGTCCGCAGCTCGAAAGGT +
Preference number: 4 (lower is better)
Translates to: GTSTHVSHTPTPDHPFSCVLWGR*VRSSKG
Trigger: ACCTTTCGAGCTGCGGACTCATCGGCCCCAGAGGAC...ACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTGCAGAGAGCTGGTCATaGGAGAGCCGTGCACGGCCA +
Preference number: 4 (lower is better)
Translates to: GTSTHVSHTPTPDHPFSCAESWS*ESRARP
Trigger: TGGCCGTGCACGGCTCTCTCATGACCAGCTCTCTGC...ACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GATGTGTATGTGCGGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCAGTTAGCTCGGGAAGGTaGGTCTCCGCAGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: DVYVRHEHTCLPHANTRPVSSGR*VSAAWV
Trigger: CACCCAGGCTGCGGAGACTCACCTTCCCGAGCTAAC...TGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCCGCACATACACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TTCAGTGAAAGCACTTGTGAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCCAGACGGGTGTAGCTaGTTCTTGCGTTACCCCGCC +
Preference number: 4 (lower is better)
Translates to: FSESTCELPSRCHPTARDPDGCS*FLRYPA
Trigger: GGCGGGGTAACGCAAGAAGCAGCTACACCCGTCTGG...GTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTCACAAGTGCTTTCACTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GAAAGGCCACTGCAAGGTGGGTGGGATCTGGGGTGTGGTGGCGGTGGCACTGCTCCGGCTAAAATTAACTaGAGCCAAGCAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ERPLQGGWDLGCGGGGTAPAKIN*SQAAGR
Trigger: CCTGCCTGCTGCTTGGCTGCAGTTAATTTTAGCCGG...AGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGTGGCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520262.6
CDS-3UTR CCA 90 bp GCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCACAGCCGAAGGTGCCGTTaGAGATGGGCGATTTCACAG +
Preference number: 4 (lower is better)
Translates to: AGHERAVHGQDVYVRHEHSRRCR*RWAISQ
Trigger: CTGTGAAATCGCCCATCTCCAACGGCACCTTCGGCT...GTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp AGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAGTGGGAGCCACGGCGTaGCGCATGCTGGGTGACGGT +
Preference number: 4 (lower is better)
Translates to: STRPLQGQVACSEAHYLTVGATA*RMLGDG
Trigger: ACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC...TGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCACGAGACTCCAATGGGATaGAGTAGAGCCTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: AGHERAVHGQDVYVRHEHETPMG*SRAWGC
Trigger: ACACCCCCAGGCTCTACTCCATCCCATTGGAGTCTC...GTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp CGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCAGGCGACAGGTTCACGTCAATaGTACCTTTGCGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: RGACWVTVSPPHTALGQATGSRQ*YLCEWF
Trigger: AAACCATTCGCAAAGGTATCATTGACGTGAACCTGT...CGCCTGCCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCACACAGCAGGCCAGACATaGAACCAGACAACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: AGHERAVHGQDVYVRHEHTAGQT*NQTTVE
Trigger: CTCCACTGTTGTCTGGTTTCATGTCTGGCCTGCTGT...GTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp TTCAGTGAAAGCACTTGTGAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACACCCGAAACAGGCGGTaGGGACCTGCAGGAAATGGA +
Preference number: 4 (lower is better)
Translates to: FSESTCELPSRCHPTARDTRNRR*GPAGNG
Trigger: TCCATTTCCTGCAGGTCCTCACCGCCTGTTTCGGGT...GTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTCACAAGTGCTTTCACTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GTCTCCGCAGCCTGGGTGAACAGTGTGGGATGGAGCCTCCTGGAAGGGAGGCAGAAGCCTCCTTTGTGCTaGCATTGGAGACAAGGATCC +
Preference number: 4 (lower is better)
Translates to: VSAAWVNSVGWSLLEGRQKPPLC*HWRQGS
Trigger: GGATCCTTGTCTCCAATGTCAGCACAAAGGAGGCTT...CTGCCTCCCTTCCAGGAGGCTCCATCCCACACTGTTCACCCAGGCTGCGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TTCAGTGAAAGCACTTGTGAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACGCTCGAAAGGTGGCGTaGACTGGCAGCCCACAAATG +
Preference number: 4 (lower is better)
Translates to: FSESTCELPSRCHPTARDARKVA*TGSPQM
Trigger: CATTTGTGGGCTGCCAGTGCACGCCACCTTTCGAGC...GTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTCACAAGTGCTTTCACTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTCTCCTTCTCCTCCTCTaGAGGGTCCTCTCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ARAHMSPTRQHQTIPLAVLLLLL*RVLSRL
Trigger: CAGCCGCGAGAGGACCCTGCAGAGGAGGAGAAGGAG...AACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TTCAGTGAAAGCACTTGTGAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACGAGCCCACCTTACAGTaGGTGGTGCTGACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: FSESTCELPSRCHPTARDEPTLQ*VVLTGS
Trigger: GCTTCCAGTCAGCACCACGCACTGTAAGGTGGGCTC...GTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTCACAAGTGCTTTCACTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCGGTGGCACTGCTGGTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCATCCCTTTAGCTGTTTaGAGCTGGAAGAAGACAAAT +
Preference number: 4 (lower is better)
Translates to: AVALLVGATAWRMLGDGVIPLAV*SWKKTN
Trigger: ATTTGTCTTCTTCCAGCTGCAAACAGCTAAAGGGAT...GACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCCTCCTGGAAGGGAGGCAGAGAGCTGGTCATGAGAGAGCCGTGCACGGCCAGGTTTTTCCTCCCGATCTaGGAAAGCTGTGATGTCTCC +
Preference number: 4 (lower is better)
Translates to: ASWKGGRELVMREPCTARFFLPI*ESCDVS
Trigger: GGAGACATCACAGCTTTCCCAGATCGGGAGGAAAAA...CCTGGCCGTGCACGGCTCTCTCATGACCAGCTCTCTGCCTCCCTTCCAGGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCCTCCTGGAAGGGAGGCAGAGAGCTGGTCATGAGAGAGCCGTGCACGGCCAGGGGCCATTTTGGAAAGTaGGTGCCGGGTACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ASWKGGRELVMREPCTARGHFGK*VPGTFL
Trigger: AAGAAAAGTACCCGGCACCCACTTTCCAAAATGGCC...CCTGGCCGTGCACGGCTCTCTCATGACCAGCTCTCTGCCTCCCTTCCAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTTGCAGCCATGACCGTCGCTCCTaGTGTGGCCGTCGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: AHMSPTRQHQTIPLAVCSHDRRS*CGRRSR
Trigger: TCGGCTTCGACGGCCACACCAGGAGCGACGGTCATG...GCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTTGCAGCGTTGCTTTCCTGGGCTaGCTTCTCCTCGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: AHMSPTRQHQTIPLAVCSVAFLG*LLLGAP
Trigger: AGGGGCCCCGAGGAGAAGCCAGCCCAGGAAAGCAAC...GCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GTCTCCGCAGCCTGGGTGAACAGTGTGGGATGGAGCCTCCTGGAAGGGAGGCAGAAGAAGAGACTCCAATaGGATGGAGTAGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: VSAAWVNSVGWSLLEGRQKKRLQ*DGVEPG
Trigger: CCCAGGCTCTACTCCATCCCATTGGAGTCTCTTCTT...CTGCCTCCCTTCCAGGAGGCTCCATCCCACACTGTTCACCCAGGCTGCGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp AGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAGTCCTCTGGGGCCGATaGGTCCGCAGCTCGAAAGGT +
Preference number: 4 (lower is better)
Translates to: STRPLQGQVACSEAHYLTVLWGR*VRSSKG
Trigger: ACCTTTCGAGCTGCGGACTCATCGGCCCCAGAGGAC...TGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GTCTCCGCAGCCTGGGTGAACAGTGTGGGATGGAGCCTCCTGGAAGGGAGGCAGGGGAGACAGACAATGTaGAAACGTAACACTGGCCAA +
Preference number: 4 (lower is better)
Translates to: VSAAWVNSVGWSLLEGRQGRQTM*KRNTGQ
Trigger: TTGGCCAGTGTTACGTTTTCACATTGTCTGTCTCCC...CTGCCTCCCTTCCAGGAGGCTCCATCCCACACTGTTCACCCAGGCTGCGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCCTCCTGGAAGGGAGGCAGAGAGCTGGTCATGAGAGAGCCGTGCACGGCCAGGGTTTGCTCTGGAAAGTaGTGGACAATGTTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ASWKGGRELVMREPCTARVCSGK*WTMLEA
Trigger: AGCCTCTAACATTGTCCAGCACTTTCCAGAGCAAAC...CCTGGCCGTGCACGGCTCTCTCATGACCAGCTCTCTGCCTCCCTTCCAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCATATTGAAGCTAAAATaGATGCCTGCCTCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: VGATAWRMLGDGVTATHCILKLK*MPASRS
Trigger: TGACCTTGAGGCAGGCATGCATTTTAGCTTCAATAT...GCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp TGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTGTAACACGGAGCCGGTaGTTTCAAATATTGAAGCTA +
Preference number: 4 (lower is better)
Translates to: WEPRRGACWVTVSPPHTAVTRSR*FQILKL
Trigger: TAGCTTCAATATTTGAAACCACCGGCTCCGTGTTAC...AGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCACTGGTTTCTCCTACTTTaGCGCCTAGTAACACGGAGC +
Preference number: 4 (lower is better)
Translates to: AGHERAVHGQDVYVRHEHWFLLL*RLVTRS
Trigger: GCTCCGTGTTACTAGGCGCCAAAGTAGGAGAAACCA...GTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp CATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTAAAGGTGGCGTGCACTaGCAGCCCACAAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: HPTARDLCRVRLPVLKLIKGGVH*QPTNGC
Trigger: GCAGCCATTTGTGGGCTGCCAGTGCACGCCACCTTT...AATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp CGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGCAGGCGGACAAATCACACATATaGAAGGATCCCATACATGAG +
Preference number: 4 (lower is better)
Translates to: RGACWVTVSPPHTALGQADKSHI*KDPIHE
Trigger: CTCATGTATGGGATCCTTCCATATGTGTGATTTGTC...CGCCTGCCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTGTGAACAGTGTGGGATaGAGCCTCCTGGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GTSTHVSHTPTPDHPFSCVNSVG*SLLEGR
Trigger: CCTCCCTTCCAGGAGGCTCCATCCCACACTGTTCAC...ACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTGATCTGGGAAAGCTGTaGTGTCTCCTCCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: ARAHMSPTRQHQTIPLAVDLGKL*CLLLPS
Trigger: CGAGGGCAGGAGGAGACATCACAGCTTTCCCAGATC...AACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342228.7
CDS-3UTR TCA 90 bp GCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCACACCGATTGCGACCAGTaGGAATCCTATAGTAGAACC +
Preference number: 4 (lower is better)
Translates to: AGHERAVHGQDVYVRHEHTDCDQ*ESYSRT
Trigger: GGTTCTACTATAGGATTCTCACTGGTCGCAATCGGT...GTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp AGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAAGGCGATCACCACTGTaGAGGCTGAGGCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: STRPLQGQVACSEAHYLTRRSPL*RLRPAR
Trigger: TCGAGCTGGCCTCAGCCTTCACAGTGGTGATCGCCT...TGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTTACAGTGCGTGGTGCTaGCTGGAAGCCCGATGTTGG +
Preference number: 4 (lower is better)
Translates to: ARAHMSPTRQHQTIPLAVYSAWC*LEARCW
Trigger: CCAACATCGGGCTTCCAGTCAGCACCACGCACTGTA...AACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCACACAAGCTCCATCCACTaGACACCTTTGGTACCGATT +
Preference number: 4 (lower is better)
Translates to: AGHERAVHGQDVYVRHEHTSSIH*TPLVPI
Trigger: AATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGT...GTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GAAAGGCCACTGCAAGGTGGGTGGGATCTGGGGTGTGGTGGCGGTGGCACTGCTAAATACTGGGGACTCTaGTTCCTGAACCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: ERPLQGGWDLGCGGGGTAKYWGL*FLNLTE
Trigger: CTCAGTAAGGTTCAGGAAGCAGAGTCCCCAGTATTT...AGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGTGGCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TTCAGTGAAAGCACTTGTGAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACGGTGTAGCTGCTTCTTaGGTTACCCCGCCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: FSESTCELPSRCHPTARDGVAAS*VTPPCL
Trigger: CAAACAAGGCGGGGTAACGCAAGAAGCAGCTACACC...GTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTCACAAGTGCTTTCACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTTGCAGCGAGCCCACCTTACAGTaGGTGGTGCTGACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: AHMSPTRQHQTIPLAVCSEPTLQ*VVLTGS
Trigger: GCTTCCAGTCAGCACCACGCACTGTAAGGTGGGCTC...GCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCACGGCCATTTTGGAAAGTaGGTGCCGGGTACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: AGHERAVHGQDVYVRHEHGHFGK*VPGTFL
Trigger: AAGAAAAGTACCCGGCACCCACTTTCCAAAATGGCC...GTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp TTCAGTGAAAGCACTTGTGAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACTCCACTGCACACCTTTaGTACCGATTGCGACCAGTG +
Preference number: 4 (lower is better)
Translates to: FSESTCELPSRCHPTARDSTAHL*YRLRPV
Trigger: CACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGA...GTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTCACAAGTGCTTTCACTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TGGAGACAAGGATCCGTTCTTCAGGCTGCAGGGAGAATTGGGATAGAAACTGACTGTGATGTCTCCTCCTaGCCTCGGTCCCGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: WRQGSVLQAAGRIGIETDCDVSS*PRSRAV
Trigger: GACCGCACGGGACCGAGGGCAGGAGGAGACATCACA...GTCAGTTTCTATCCCAATTCTCCCTGCAGCCTGAAGAACGGATCCTTGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342228.7
CDS-3UTR GCA 90 bp GAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGATATTGAAGCTAAAATaGATGCCTGCCTCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: ELPSRCHPTARDLCRVRLILKLK*MPASRS
Trigger: TGACCTTGAGGCAGGCATGCATTTTAGCTTCAATAT...CAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp CATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTAAGGCCGAGCACTGGTaGTCCTGTGTACATGATGGA +
Preference number: 4 (lower is better)
Translates to: HPTARDLCRVRLPVLKLIKAEHW*SCVHDG
Trigger: TCCATCATGTACACAGGAGCACCAGTGCTCGGCCTT...AATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TGGAGACAAGGATCCGTTCTTCAGGCTGCAGGGAGAATTGGGATAGAAACTGACCTCCTTCTCCTCCTCTaGAGGGTCCTCTCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: WRQGSVLQAAGRIGIETDLLLLL*RVLSRL
Trigger: CAGCCGCGAGAGGACCCTGCAGAGGAGGAGAAGGAG...GTCAGTTTCTATCCCAATTCTCCCTGCAGCCTGAAGAACGGATCCTTGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp AGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACACAGGCGGTGAGGACCTaGAGGAAATGGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: STRPLQGQVACSEAHYLTQAVRT*RKWNRR
Trigger: CCTCCTGTTCCATTTCCTGCAGGTCCTCACCGCCTG...TGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTGCCAGGATGTGTATGTaGGGCACGAGCACACATGTC +
Preference number: 4 (lower is better)
Translates to: ARAHMSPTRQHQTIPLAVARMCM*GTSTHV
Trigger: GACATGTGTGCTCGTGCCGCACATACACATCCTGGC...AACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCCTCCTGGAAGGGAGGCAGAGAGCTGGTCATGAGAGAGCCGTGCACGGCCAGGACAAATACTCATCCATaGCCATTTTGGAAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: ASWKGGRELVMREPCTARTNTHP*PFWKVG
Trigger: ACCCACTTTCCAAAATGGCCATGGATGAGTATTTGT...CCTGGCCGTGCACGGCTCTCTCATGACCAGCTCTCTGCCTCCCTTCCAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTGTGCCCGGAGGCCATTaGGAACAGGGTCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: ARAHMSPTRQHQTIPLAVVPGGH*EQGLPF
Trigger: AAAAGGAAGACCCTGTTCCCAATGGCCTCCGGGCAC...AACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTAGCAGCATAGAATACTaGGAGTGCCCGGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: GTSTHVSHTPTPDHPFSCSSIEY*ECPEAI
Trigger: AATGGCCTCCGGGCACTCCCAGTATTCTATGCTGCT...ACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp AGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAAAAGGTGGCGTGCACTaGCAGCCCACAAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: STRPLQGQVACSEAHYLTKGGVH*QPTNGC
Trigger: GCAGCCATTTGTGGGCTGCCAGTGCACGCCACCTTT...TGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp TTCAGTGAAAGCACTTGTGAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACGTGTCCAGCTTTGTGTaGGCCTCAGAGAAATACTCC +
Preference number: 4 (lower is better)
Translates to: FSESTCELPSRCHPTARDVSSFV*ASEKYS
Trigger: GGAGTATTTCTCTGAGGCCCACACAAAGCTGGACAC...GTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTCACAAGTGCTTTCACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp TTCAGTGAAAGCACTTGTGAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACAAGAAGAGACTCCAATaGGATGGAGTAGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: FSESTCELPSRCHPTARDKKRLQ*DGVEPG
Trigger: CCCAGGCTCTACTCCATCCCATTGGAGTCTCTTCTT...GTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTCACAAGTGCTTTCACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTACAGCAGGCCAGACATaGAACCAGACAACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: ARAHMSPTRQHQTIPLAVTAGQT*NQTTVE
Trigger: CTCCACTGTTGTCTGGTTTCATGTCTGGCCTGCTGT...AACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp AGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAGGGGACTCTGCTTCCTaGACCTTACTGAGGCTTTCG +
Preference number: 4 (lower is better)
Translates to: STRPLQGQVACSEAHYLTGDSAS*TLLRLS
Trigger: CGAAAGCCTCAGTAAGGTTCAGGAAGCAGAGTCCCC...TGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAGTATATTCCCCTGCTGCTCCCGTaGGCGGGATGGTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: DLCRVRLPVLKLITLQYIPLLLP*AGWCCH
Trigger: ATGACAGCACCATCCCGCTCACGGGAGCAGCAGGGG...AATATACTGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAGTATATTGCTCTGGGGCAGGCGTaGTCAGTGAGGGTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: DLCRVRLPVLKLITLQYIALGQA*SVRVGD
Trigger: GTCTCCCACCCTCACTGATCACGCCTGCCCCAGAGC...AATATACTGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GATGTGTATGTGCGGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCAAAGCCTCCTTTGTGCTaGCATTGGAGACAAGGATCC +
Preference number: 4 (lower is better)
Translates to: DVYVRHEHTCLPHANTRPKPPLC*HWRQGS
Trigger: GGATCCTTGTCTCCAATGTCAGCACAAAGGAGGCTT...TGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCCGCACATACACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTAAGGAAGCAATCAGCTaGCACACAGCGGAACCAACC +
Preference number: 4 (lower is better)
Translates to: ARAHMSPTRQHQTIPLAVKEAIS*HTAEPT
Trigger: GGTTGGTTCCGCTGTGTGGCAGCTGATTGCTTCCTT...AACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTTGCAGCAAGGAAGCAATCAGCTaGCACACAGCGGAACCAACC +
Preference number: 4 (lower is better)
Translates to: AHMSPTRQHQTIPLAVCSKEAIS*HTAEPT
Trigger: GGTTGGTTCCGCTGTGTGGCAGCTGATTGCTTCCTT...GCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp AGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAATGGGTCATGGACAGTaGTCTTCCGTATGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: STRPLQGQVACSEAHYLTMGHGQ*SSVCSP
Trigger: CGGGCTGCATACGGAAGAGCACTGTCCATGACCCAT...TGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTTGCAGCCAGCCCACAAATGGCTaGGGTGTAGCAGGTGTAACT +
Preference number: 4 (lower is better)
Translates to: AHMSPTRQHQTIPLAVCSQPTNG*GVAGVT
Trigger: AGTTACACCTGCTACACCGCAGCCATTTGTGGGCTG...GCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp AGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAGTCATGAGAGAGCCGTaGACGGCCAGGATGTGTATG +
Preference number: 4 (lower is better)
Translates to: STRPLQGQVACSEAHYLTVMREP*TARMCM
Trigger: CATACACATCCTGGCCGTGCACGGCTCTCTCATGAC...TGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTTGCAGCTCCACTGCACACCTTTaGTACCGATTGCGACCAGTG +
Preference number: 4 (lower is better)
Translates to: AHMSPTRQHQTIPLAVCSSTAHL*YRLRPV
Trigger: CACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGA...GCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTAGCAGCATAGAATACTaGGAGTGCCCGGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: ARAHMSPTRQHQTIPLAVSSIEY*ECPEAI
Trigger: AATGGCCTCCGGGCACTCCCAGTATTCTATGCTGCT...AACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTCTACCAGGGGACCGATaGCATTACTCACGTCATTGC +
Preference number: 4 (lower is better)
Translates to: ARAHMSPTRQHQTIPLAVLPGDR*HYSRHC
Trigger: GCAATGACGTGAGTAATGCCATCGGTCCCCTGGTAG...AACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGATTCCCCTGCTTCTTTaGTACTTTCCAAAATTCTCT +
Preference number: 4 (lower is better)
Translates to: ELPSRCHPTARDLCRVRLIPLLL*YFPKFS
Trigger: AGAGAATTTTGGAAAGTACCAAAGAAGCAGGGGAAT...CAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp CTCCCTCTCATCCCTGAAGTGCTAGAATGTCAAAGCACAGAAAAAGCCTCCTTTGGATCTGGGGTGTGGTaGCGGTGGCACTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LPLIPEVLECQSTEKASFGSGVW*RWHCWW
Trigger: CCACCAGCAGTGCCACCGCCACCACACCCCAGATCC...AAAGGAGGCTTTTTCTGTGCTTTGACATTCTAGCACTTCAGGGATGAGAGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp TGGAGACAAGGATCCGTTCTTCAGGCTGCAGGGAGAATTGGGATAGAAACTGACCACCACTGTGAAGGCTaGGGCCAGCTCGATCGTGAA +
Preference number: 4 (lower is better)
Translates to: WRQGSVLQAAGRIGIETDHHCEG*GQLDRE
Trigger: TTCACGATCGAGCTGGCCTCAGCCTTCACAGTGGTG...GTCAGTTTCTATCCCAATTCTCCCTGCAGCCTGAAGAACGGATCCTTGTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTCCTCCCTCTCATCCCTaGAGTGCTAGAATGTCAAAG +
Preference number: 4 (lower is better)
Translates to: ARAHMSPTRQHQTIPLAVPPSHP*SARMSK
Trigger: CTTTGACATTCTAGCACTTCAGGGATGAGAGGGAGG...AACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTACAAGCTCCATCCACTaGACACCTTTGGTACCGATT +
Preference number: 4 (lower is better)
Translates to: GTSTHVSHTPTPDHPFSCTSSIH*TPLVPI
Trigger: AATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGT...ACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp AGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAATAGAATACTGGGAGTaGCCGGAGGCCATTGGGAAC +
Preference number: 4 (lower is better)
Translates to: STRPLQGQVACSEAHYLTIEYWE*PEAIGN
Trigger: GTTCCCAATGGCCTCCGGGCACTCCCAGTATTCTAT...TGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp CTCCCTCTCATCCCTGAAGTGCTAGAATGTCAAAGCACAGAAAAAGCCTCCTTTCAGTGCTCTTCCGTATaGAGCCCGAGGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LPLIPEVLECQSTEKASFQCSSV*SPRVAA
Trigger: GGCAGCCACCCTCGGGCTGCATACGGAAGAGCACTG...AAAGGAGGCTTTTTCTGTGCTTTGACATTCTAGCACTTCAGGGATGAGAGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCACATCCCTTTAGCTGTTTaGAGCTGGAAGAAGACAAAT +
Preference number: 4 (lower is better)
Translates to: AGHERAVHGQDVYVRHEHIPLAV*SWKKTN
Trigger: ATTTGTCTTCTTCCAGCTGCAAACAGCTAAAGGGAT...GTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GATGTGTATGTGCGGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCACCTCACCAACACCTGTaGATTCTCTACTCTGATGAC +
Preference number: 4 (lower is better)
Translates to: DVYVRHEHTCLPHANTRPPHQHL*ILYSDD
Trigger: GTCATCAGAGTAGAGAATGCACAGGTGTTGGTGAGG...TGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCCGCACATACACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp AGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACACATCCATGGCCATTTTaGAAAGTGGGTGCCGGGTAC +
Preference number: 4 (lower is better)
Translates to: STRPLQGQVACSEAHYLTHPWPF*KVGAGY
Trigger: GTACCCGGCACCCACTTTCCAAAATGGCCATGGATG...TGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp CTCCCTCTCATCCCTGAAGTGCTAGAATGTCAAAGCACAGAAAAAGCCTCCTTTCCACTGCAAGGTGGGTaGGATCTGGGGTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LPLIPEVLECQSTEKASFPLQGG*DLGCGG
Trigger: GCCACCACACCCCAGATCCCACCCACCTTGCAGTGG...AAAGGAGGCTTTTTCTGTGCTTTGACATTCTAGCACTTCAGGGATGAGAGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp TGGAGACAAGGATCCGTTCTTCAGGCTGCAGGGAGAATTGGGATAGAAACTGACAAATGGAACAGGAGGTaGACCTCGGGTGCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: WRQGSVLQAAGRIGIETDKWNRR*TSGASF
Trigger: GAAGGACGCACCCGAGGTTCACCTCCTGTTCCATTT...GTCAGTTTCTATCCCAATTCTCCCTGCAGCCTGAAGAACGGATCCTTGTCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTCAGGTTGCCTGTTCTaGAGCTCATTACCTTACAGT +
Preference number: 4 (lower is better)
Translates to: GTSTHVSHTPTPDHPFSCSGCLF*SSLPYS
Trigger: ACTGTAAGGTAATGAGCTTCAGAACAGGCAACCTGA...ACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GATGTGTATGTGCGGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCAGGTTGCCTGTTCTaGAGCTCATTACCTTACAGT +
Preference number: 4 (lower is better)
Translates to: DVYVRHEHTCLPHANTRPSGCLF*SSLPYS
Trigger: ACTGTAAGGTAATGAGCTTCAGAACAGGCAACCTGA...TGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCCGCACATACACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp CATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTGTTGGCAACATCGTTTaGACCAACAGAAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: HPTARDLCRVRLPVLKLIVGNIV*TNRKGQ
Trigger: TTGGCCTTTTCTGTTGGTGCAAACGATGTTGCCAAC...AATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTTGCAGCATCCGTTCTTCAGGCTaGAGGGAGAATTGGGATAGA +
Preference number: 4 (lower is better)
Translates to: AHMSPTRQHQTIPLAVCSIRSSG*RENWDR
Trigger: TCTATCCCAATTCTCCCTGCAGCCTGAAGAACGGAT...GCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp ATCTTGACAAGCTCCATCCACTGCACACCTTTGGTACCGATTGCGACCAGTGAGAGCGGAACCTCCTGCTaGAGGACTCTTCCTACAAGA +
Preference number: 4 (lower is better)
Translates to: ILTSSIHCTPLVPIATSESGTSC*RTLPTR
Trigger: TCTTGTAGGAAGAGTCCTGCAGCAGGAGGTTCCGCT...CTCACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR GCA 90 bp CTCCTGCTGCAGGACTCTTCCTACAAGAGGATATGTCCTGTTGAAAGCAGAAGGCACAGCGGAACCTCCTaGTGCAGGACTCTTCCTACA +
Preference number: 4 (lower is better)
Translates to: LLLQDSSYKRICPVESRRHSGTS*CRTLPT
Trigger: TGTAGGAAGAGTCCTGCAGCAGGAGGTTCCGCTGTG...CCTTCTGCTTTCAACAGGACATATCCTCTTGTAGGAAGAGTCCTGCAGCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR GCA 90 bp GTAGAACCCACAATGCAGTGCGTTCCTGAGATTGGAAGCCTCAGGAAGGAAGCAAAGGAAGCAATCAGCTaGCACACAGCGGAACCTCCT +
Preference number: 4 (lower is better)
Translates to: VEPTMQCVPEIGSLRKEAKEAIS*HTAEPP
Trigger: AGGAGGTTCCGCTGTGTGGCAGCTGATTGCTTCCTT...TGCTTCCTTCCTGAGGCTTCCAATCTCAGGAACGCACTGCATTGTGGGTTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CCA 90 bp CATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTCTGTACCAAAGGAGTTaGCAACATCGTTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: HPTARDLCRVRLPVLKLILYQRS*QHRLHQ
Trigger: TTGGTGCAAACGATGTTGCCAACTCCTTTGGTACAG...AATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp AGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACATGGTTTCTCCTACTTTaGCGCCTAGTAACACGGAGC +
Preference number: 4 (lower is better)
Translates to: STRPLQGQVACSEAHYLTWFLLL*RLVTRS
Trigger: GCTCCGTGTTACTAGGCGCCAAAGTAGGAGAAACCA...TGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp CAGCGGAACCTCCTGCTGCAGGACTCTTCCTACAAGAGGATATGTCCTGTTGAATCCACTGCACACCTTTaGTACCGATTGCGACCAGTG +
Preference number: 4 (lower is better)
Translates to: QRNLLLQDSSYKRICPVESTAHL*YRLRPV
Trigger: CACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGA...TTCAACAGGACATATCCTCTTGTAGGAAGAGTCCTGCAGCAGGAGGTTCCGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CCA 90 bp TGGAGACAAGGATCCGTTCTTCAGGCTGCAGGGAGAATTGGGATAGAAACTGACGTGCCCGGAGGCCATTaGGAACAGGGTCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: WRQGSVLQAAGRIGIETDVPGGH*EQGLPF
Trigger: AAAAGGAAGACCCTGTTCCCAATGGCCTCCGGGCAC...GTCAGTTTCTATCCCAATTCTCCCTGCAGCCTGAAGAACGGATCCTTGTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp CTCCCTCTCATCCCTGAAGTGCTAGAATGTCAAAGCACAGAAAAAGCCTCCTTTGTGCGTGGTGCTGACTaGAAGCCCGATGTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LPLIPEVLECQSTEKASFVRGAD*KPDVGG
Trigger: GCCTCCAACATCGGGCTTCCAGTCAGCACCACGCAC...AAAGGAGGCTTTTTCTGTGCTTTGACATTCTAGCACTTCAGGGATGAGAGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCACATTCCCCTGCTTCTTTaGTACTTTCCAAAATTCTCT +
Preference number: 4 (lower is better)
Translates to: AGHERAVHGQDVYVRHEHIPLLL*YFPKFS
Trigger: AGAGAATTTTGGAAAGTACCAAAGAAGCAGGGGAAT...GTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp AGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACACTTCCTGAACCTTACTaGGGCTTTCGTCAGATACTC +
Preference number: 4 (lower is better)
Translates to: STRPLQGQVACSEAHYLTLPEPY*GFRQIL
Trigger: GAGTATCTGACGAAAGCCTCAGTAAGGTTCAGGAAG...TGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAGTATATTACGTCATTGCCGCCGTaGGCAAAGGACCCGAAACAG +
Preference number: 4 (lower is better)
Translates to: DLCRVRLPVLKLITLQYITSLPP*AKDPKQ
Trigger: CTGTTTCGGGTCCTTTGCTCACGGCGGCAATGACGT...AATATACTGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAGTATATTCACCACTGTGAAGGCTaGGGCCAGCTCGATCGTGAA +
Preference number: 4 (lower is better)
Translates to: DLCRVRLPVLKLITLQYIHHCEG*GQLDRE
Trigger: TTCACGATCGAGCTGGCCTCAGCCTTCACAGTGGTG...AATATACTGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp CTCCCTCTCATCCCTGAAGTGCTAGAATGTCAAAGCACAGAAAAAGCCTCCTTTCGTCGAAGCCGAAGGTaGCGTTGGAGATGGGCGATT +
Preference number: 4 (lower is better)
Translates to: LPLIPEVLECQSTEKASFRRSRR*RWRWAI
Trigger: AATCGCCCATCTCCAACGGCACCTTCGGCTTCGACG...AAAGGAGGCTTTTTCTGTGCTTTGACATTCTAGCACTTCAGGGATGAGAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp GACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAGTATATTGCAGCAGCCGGTAGTTaGTTTCCTGGGCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: DLCRVRLPVLKLITLQYIAAAGS*FPGLAS
Trigger: AGAAGCCAGCCCAGGAAAGCAACTACCGGCTGCTGC...AATATACTGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp CTCCCTCTCATCCCTGAAGTGCTAGAATGTCAAAGCACAGAAAAAGCCTCCTTTGCTCGAAAGGTGGCGTaGACTGGCAGCCCACAAATG +
Preference number: 4 (lower is better)
Translates to: LPLIPEVLECQSTEKASFARKVA*TGSPQM
Trigger: CATTTGTGGGCTGCCAGTGCACGCCACCTTTCGAGC...AAAGGAGGCTTTTTCTGTGCTTTGACATTCTAGCACTTCAGGGATGAGAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp CTCCCTCTCATCCCTGAAGTGCTAGAATGTCAAAGCACAGAAAAAGCCTCCTTTGAGGTGAACCTCGGGTaGGTCCTTCTCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LPLIPEVLECQSTEKASFEVNLG*VLLLLL
Trigger: GAGAAGGAGGAGAAGGACGCACCCGAGGTTCACCTC...AAAGGAGGCTTTTTCTGTGCTTTGACATTCTAGCACTTCAGGGATGAGAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp TTCAGTGAAAGCACTTGTGAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACACAAATACTCATCCATaGCCATTTTGGAAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: FSESTCELPSRCHPTARDTNTHP*PFWKVG
Trigger: ACCCACTTTCCAAAATGGCCATGGATGAGTATTTGT...GTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTCACAAGTGCTTTCACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp GCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTTGCAGCCTGTACCAAAGGAGTTaGCAACATCGTTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: AHMSPTRQHQTIPLAVCSLYQRS*QHRLHQ
Trigger: TTGGTGCAAACGATGTTGCCAACTCCTTTGGTACAG...GCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp TGGAGACAAGGATCCGTTCTTCAGGCTGCAGGGAGAATTGGGATAGAAACTGACCAGAGCCATGGGTCATaGACAGTGCTCTTCCGTATG +
Preference number: 4 (lower is better)
Translates to: WRQGSVLQAAGRIGIETDQSHGS*TVLFRM
Trigger: CATACGGAAGAGCACTGTCCATGACCCATGGCTCTG...GTCAGTTTCTATCCCAATTCTCCCTGCAGCCTGAAGAACGGATCCTTGTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTAGAAGACTGCTCTCCTaGTCACAAACACAATCTGAA +
Preference number: 4 (lower is better)
Translates to: ARAHMSPTRQHQTIPLAVRRLLS*SQTQSE
Trigger: TTCAGATTGTGTTTGTGATCAGGAGAGCAGTCTTCT...AACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520262.6
CDS-3UTR GCA 90 bp CATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTAATTCTTCAGAAGACTaGTCTCCTGATCACAAACAC +
Preference number: 4 (lower is better)
Translates to: HPTARDLCRVRLPVLKLINSSED*SPDHKH
Trigger: GTGTTTGTGATCAGGAGAGCAGTCTTCTGAAGAATT...AATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520262.6
CDS-3UTR CCA 90 bp GCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTACAGTGAGTTTGCTCTaGAAAGTGCTGGACAATGTT +
Preference number: 4 (lower is better)
Translates to: ARAHMSPTRQHQTIPLAVTVSLL*KVLDNV
Trigger: AACATTGTCCAGCACTTTCCAGAGCAAACTCACTGT...AACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp ACACAGCGGAACCTCCTGCTGCAGGACTCTTCCTACAAGAGGATATGTCCTGTTGGCCATTTTGGAAAGTaGGTGCCGGGTACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TQRNLLLQDSSYKRICPVGHFGK*VPGTFL
Trigger: AAGAAAAGTACCCGGCACCCACTTTCCAAAATGGCC...AACAGGACATATCCTCTTGTAGGAAGAGTCCTGCAGCAGGAGGTTCCGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CCA 90 bp TTGGTACCGATTGCGACCAGTGAGAATCCTATAGTAGAACCCACAATGCAGTGCCATCCATGGCCATTTTaGAAAGTGGGTGCCGGGTAC +
Preference number: 4 (lower is better)
Translates to: LVPIATSENPIVEPTMQCHPWPF*KVGAGY
Trigger: GTACCCGGCACCCACTTTCCAAAATGGCCATGGATG...GCACTGCATTGTGGGTTCTACTATAGGATTCTCACTGGTCGCAATCGGTACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CCA 90 bp CTGCTGCAGGACTCTTCCTACAAGAGGATATGTCCTGTTGAAAGCAGAAGGTGGTGGTTTCTCCTACTTTaGCGCCTAGTAACACGGAGC +
Preference number: 4 (lower is better)
Translates to: LLQDSSYKRICPVESRRWWFLLL*RLVTRS
Trigger: GCTCCGTGTTACTAGGCGCCAAAGTAGGAGAAACCA...CCACCTTCTGCTTTCAACAGGACATATCCTCTTGTAGGAAGAGTCCTGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CCA 90 bp GATGTGTATGTGCGGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCAGACAAATCACACATATaGAAGGATCCCATACATGAG +
Preference number: 4 (lower is better)
Translates to: DVYVRHEHTCLPHANTRPDKSHI*KDPIHE
Trigger: CTCATGTATGGGATCCTTCCATATGTGTGATTTGTC...TGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCCGCACATACACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp TCCACTCCCAACTTGAATATGTTTGAAATAATGCTGCCTATTCTATGGATACAACGGTGGCACTGCTGGTaGGAGCCACGGCGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: STPNLNMFEIMLPILWIQRWHCW*EPRRGA
Trigger: TGCGCCACGCCGTGGCTCCCACCAGCAGTGCCACCG...TTGTATCCATAGAATAGGCAGCATTATTTCAAACATATTCAAGTTGGGAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
3UTR CAA 72 bp TGTCATCCCACAGCACGCGACCTCTGCAGGGTCAGGTaGCCTGTTCTGAAGCTCATTACCTTACAGTATATT +
Preference number: 4 (lower is better)
Translates to: CHPTARDLCRVR*PVLKLITLQYI
Trigger: AATATACTGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR TCA 90 bp GAAGCAACAATCTTGACAAGCTCCATCCACTGCACACCTTTGGTACCGATTGCGGATCTGGGAAAGCTGTaGTGTCTCCTCCTCCTATTT +
Preference number: 4 (lower is better)
Translates to: EATILTSSIHCTPLVPIADLGKL*CLLLLF
Trigger: AAATAGGAGGAGGAGACATCACAGCTTTCCCAGATC...CGCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAAGATTGTTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR GCA 90 bp CCACAATGCAGTGCGTTCCTGAGATTGGAAGCCTCAGGAAGGAAGCAATCAGCTGTTTGCTCTGGAAAGTaGTGGACAATGTTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PQCSAFLRLEASGRKQSAVCSGK*WTMLEA
Trigger: AGCCTCTAACATTGTCCAGCACTTTCCAGAGCAAAC...AGCTGATTGCTTCCTTCCTGAGGCTTCCAATCTCAGGAACGCACTGCATTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR GCA 90 bp GAAGCAACAATCTTGACAAGCTCCATCCACTGCACACCTTTGGTACCGATTGCGACAAGCTCCATCCACTaGACACCTTTGGTACCGATT +
Preference number: 4 (lower is better)
Translates to: EATILTSSIHCTPLVPIATSSIH*TPLVPI
Trigger: AATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGT...CGCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAAGATTGTTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR GCA 90 bp GATGTGTATGTGCGGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCAGGAAAAGACATTGATTaGTATGGTAGCAGCATAGAA +
Preference number: 4 (lower is better)
Translates to: DVYVRHEHTCLPHANTRPGKDID*YGSSIE
Trigger: TTCTATGCTGCTACCATAGCAATCAATGTCTTTTCC...TGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCCGCACATACACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp TGGAGACAAGGATCCGTTCTTCAGGCTGCAGGGAGAATTGGGATAGAAACTGACTTTTTCCTCCCGATCTaGGAAAGCTGTGATGTCTCC +
Preference number: 4 (lower is better)
Translates to: WRQGSVLQAAGRIGIETDFFLPI*ESCDVS
Trigger: GGAGACATCACAGCTTTCCCAGATCGGGAGGAAAAA...GTCAGTTTCTATCCCAATTCTCCCTGCAGCCTGAAGAACGGATCCTTGTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp TCCACTCCCAACTTGAATATGTTTGAAATAATGCTGCCTATTCTATGGATACAAGGGGTGTGGTGGCGGTaGCACTGCTGGTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: STPNLNMFEIMLPILWIQGVWWR*HCWWEP
Trigger: TGGCTCCCACCAGCAGTGCCACCGCCACCACACCCC...TTGTATCCATAGAATAGGCAGCATTATTTCAAACATATTCAAGTTGGGAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TGGAGACAAGGATCCGTTCTTCAGGCTGCAGGGAGAATTGGGATAGAAACTGACGGACAAACTGCTAGCTaGTGGTTTGCAAACTACTGT +
Preference number: 4 (lower is better)
Translates to: WRQGSVLQAAGRIGIETDGQTAS*WFANYC
Trigger: ACAGTAGTTTGCAAACCAGCAGCTAGCAGTTTGTCC...GTCAGTTTCTATCCCAATTCTCCCTGCAGCCTGAAGAACGGATCCTTGTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp CTCCTGCTGCAGGACTCTTCCTACAAGAGGATATGTCCTGTTGAAAGCAGAAGGGTTGGCAACATCGTTTaGACCAACAGAAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LLLQDSSYKRICPVESRRVGNIV*TNRKGQ
Trigger: TTGGCCTTTTCTGTTGGTGCAAACGATGTTGCCAAC...CCTTCTGCTTTCAACAGGACATATCCTCTTGTAGGAAGAGTCCTGCAGCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CCA 90 bp AGAAGCAACAATCTTGACAAGCTCCATCCACTGCACACCTTTGGTACCGATTGCTTTTTCCTCCCGATCTaGGAAAGCTGTGATGTCTCC +
Preference number: 4 (lower is better)
Translates to: RSNNLDKLHPLHTFGTDCFFLPI*ESCDVS
Trigger: GGAGACATCACAGCTTTCCCAGATCGGGAGGAAAAA...GCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAAGATTGTTGCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CCA 90 bp ATCTTGACAAGCTCCATCCACTGCACACCTTTGGTACCGATTGCGACCAGTGAGGTAACACGGAGCCGGTaGTTTCAAATATTGAAGCTA +
Preference number: 4 (lower is better)
Translates to: ILTSSIHCTPLVPIATSEVTRSR*FQILKL
Trigger: TAGCTTCAATATTTGAAACCACCGGCTCCGTGTTAC...CTCACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CCA 90 bp GACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAGTATATTGTGTCCAGCTTTGTGTaGGCCTCAGAGAAATACTCC +
Preference number: 4 (lower is better)
Translates to: DLCRVRLPVLKLITLQYIVSSFV*ASEKYS
Trigger: GGAGTATTTCTCTGAGGCCCACACAAAGCTGGACAC...AATATACTGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp ACCTCCTGCTGCAGGACTCTTCCTACAAGAGGATATGTCCTGTTGAAAGCAGAACTGTACCAAAGGAGTTaGCAACATCGTTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: TSCCRTLPTRGYVLLKAELYQRS*QHRLHQ
Trigger: TTGGTGCAAACGATGTTGCCAACTCCTTTGGTACAG...TTCTGCTTTCAACAGGACATATCCTCTTGTAGGAAGAGTCCTGCAGCAGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
3UTR CAA 72 bp GCAACAATCTTGACAAGCTCCATCCACTGCACACCTTaGGTACCGATTGCGACCAGTGAGAATCCTATAGTA +
Preference number: 4 (lower is better)
Translates to: ATILTSSIHCTP*VPIATSENPIV
Trigger: TACTATAGGATTCTCACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAAGATTGTTGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR TCA 90 bp TTGGTACCGATTGCGACCAGTGAGAATCCTATAGTAGAACCCACAATGCAGTGCACAGGTTCACGTCAATaGTACCTTTGCGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: LVPIATSENPIVEPTMQCTGSRQ*YLCEWF
Trigger: AAACCATTCGCAAAGGTATCATTGACGTGAACCTGT...GCACTGCATTGTGGGTTCTACTATAGGATTCTCACTGGTCGCAATCGGTACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR GCA 90 bp GACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAGTATATTGTTTGCTCTGGAAAGTaGTGGACAATGTTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: DLCRVRLPVLKLITLQYIVCSGK*WTMLEA
Trigger: AGCCTCTAACATTGTCCAGCACTTTCCAGAGCAAAC...AATATACTGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TTGACAAGCTCCATCCACTGCACACCTTTGGTACCGATTGCGACCAGTGAGAATATATTGAAGCTAAAATaGATGCCTGCCTCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LTSSIHCTPLVPIATSENILKLK*MPASRS
Trigger: TGACCTTGAGGCAGGCATGCATTTTAGCTTCAATAT...ATTCTCACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CCA 90 bp CTCCTGCTGCAGGACTCTTCCTACAAGAGGATATGTCCTGTTGAAAGCAGAAGGACAAATACTCATCCATaGCCATTTTGGAAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: LLLQDSSYKRICPVESRRTNTHP*PFWKVG
Trigger: ACCCACTTTCCAAAATGGCCATGGATGAGTATTTGT...CCTTCTGCTTTCAACAGGACATATCCTCTTGTAGGAAGAGTCCTGCAGCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR TCA 90 bp GACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAGTATATTACAGGTTCACGTCAATaGTACCTTTGCGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: DLCRVRLPVLKLITLQYITGSRQ*YLCEWF
Trigger: AAACCATTCGCAAAGGTATCATTGACGTGAACCTGT...AATATACTGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp CTCCCTCTCATCCCTGAAGTGCTAGAATGTCAAAGCACAGAAAAAGCCTCCTTTGTAACACGGAGCCGGTaGTTTCAAATATTGAAGCTA +
Preference number: 4 (lower is better)
Translates to: LPLIPEVLECQSTEKASFVTRSR*FQILKL
Trigger: TAGCTTCAATATTTGAAACCACCGGCTCCGTGTTAC...AAAGGAGGCTTTTTCTGTGCTTTGACATTCTAGCACTTCAGGGATGAGAGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp TCCACTCCCAACTTGAATATGTTTGAAATAATGCTGCCTATTCTATGGATACAAAGCGCAGCCTCTTCTTaGAGTAGGACACGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: STPNLNMFEIMLPILWIQSAASS*SRTRCR
Trigger: GCGACACCGTGTCCTACTCCAAGAAGAGGCTGCGCT...TTGTATCCATAGAATAGGCAGCATTATTTCAAACATATTCAAGTTGGGAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CCA 90 bp TCCACTCCCAACTTGAATATGTTTGAAATAATGCTGCCTATTCTATGGATACAAAGCCGAAGGTGCCGTTaGAGATGGGCGATTTCACAG +
Preference number: 4 (lower is better)
Translates to: STPNLNMFEIMLPILWIQSRRCR*RWAISQ
Trigger: CTGTGAAATCGCCCATCTCCAACGGCACCTTCGGCT...TTGTATCCATAGAATAGGCAGCATTATTTCAAACATATTCAAGTTGGGAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TCCACTCCCAACTTGAATATGTTTGAAATAATGCTGCCTATTCTATGGATACAAAAGGCCGAGCACTGGTaGTCCTGTGTACATGATGGA +
Preference number: 4 (lower is better)
Translates to: STPNLNMFEIMLPILWIQKAEHW*SCVHDG
Trigger: TCCATCATGTACACAGGAGCACCAGTGCTCGGCCTT...TTGTATCCATAGAATAGGCAGCATTATTTCAAACATATTCAAGTTGGGAGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TCCACTCCCAACTTGAATATGTTTGAAATAATGCTGCCTATTCTATGGATACAAGTTGGCAACATCGTTTaGACCAACAGAAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: STPNLNMFEIMLPILWIQVGNIV*TNRKGQ
Trigger: TTGGCCTTTTCTGTTGGTGCAAACGATGTTGCCAAC...TTGTATCCATAGAATAGGCAGCATTATTTCAAACATATTCAAGTTGGGAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TCCACTCCCAACTTGAATATGTTTGAAATAATGCTGCCTATTCTATGGATACAAAAATACTGGGGACTCTaGTTCCTGAACCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: STPNLNMFEIMLPILWIQKYWGL*FLNLTE
Trigger: CTCAGTAAGGTTCAGGAAGCAGAGTCCCCAGTATTT...TTGTATCCATAGAATAGGCAGCATTATTTCAAACATATTCAAGTTGGGAGTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR GCA 90 bp TCCACTCCCAACTTGAATATGTTTGAAATAATGCTGCCTATTCTATGGATACAAGGAAAAGACATTGATTaGTATGGTAGCAGCATAGAA +
Preference number: 4 (lower is better)
Translates to: STPNLNMFEIMLPILWIQGKDID*YGSSIE
Trigger: TTCTATGCTGCTACCATAGCAATCAATGTCTTTTCC...TTGTATCCATAGAATAGGCAGCATTATTTCAAACATATTCAAGTTGGGAGTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS CCA 90 bp AGTTTTCGCAAAGGCGCCGCACGGCAAGCGACGGCCAGGTCCACGTaGGCCAGCAGGCGCGGGGGACGCAACCCGCCGCCGCCGCGAGCC +
Preference number: 5 (lower is better)
Translates to: SFRKGAARQATARST*ASRRGGRNPPPPRA
Trigger: GGCTCGCGGCGGCGGCGGGTTGCGTCCCCCGCGCCTGCTGGCCCACGTGGACCTGGCCGTCGCTTGCCGTGCGGCGCCTTTGCGAAAACT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523340.1
CDS-3UTR CAA 90 bp GTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCCGCCAGTCCACAGCCTaGCGGGAGCGGATCCAGCCC +
Preference number: 5 (lower is better)
Translates to: VGATAWRMLGDGVTATHCRQSTA*RERIQP
Trigger: GGGCTGGATCCGCTCCCGCAAGGCTGTGGACTGGCG...GCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS GCA 90 bp CAGGAGGTGAACCTCGGGTGCGTCCTTCTCCTCCTTCTCCTCCTCTaGAGGGTCCTCTCGCGGCTGGTCAGGGTCGGCCAGCTCCGACGC +
Preference number: 5 (lower is better)
Translates to: QEVNLGCVLLLLLLL*RVLSRLVRVGQLRR
Trigger: GCGTCGGAGCTGGCCGACCCTGACCAGCCGCGAGAGGACCCTGCAGAGGAGGAGAAGGAGGAGAAGGACGCACCCGAGGTTCACCTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS GCA 90 bp AGCGGAGCAGGAGGCGCCCGGCACTCGCAGGTAATGCCCGGTCCCTaGCACTTCCGTCGAGTTTTCGCAAAGGCGCCGCACGGCAAGCGA +
Preference number: 5 (lower is better)
Translates to: SGAGGARHSQVMPGP*HFRRVFAKAPHGKR
Trigger: TCGCTTGCCGTGCGGCGCCTTTGCGAAAACTCGACGGAAGTGGCAGGGACCGGGCATTACCTGCGAGTGCCGGGCGCCTCCTGCTCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523340.1
CDS GCA 90 bp ACCAGGCCACGAAGATGTTCCGAAAGAGGCGCCAGTCCACAGCCTTaGGGGAGCGGATCCAGCCCACGGCCACCACCGAGCCCACCTTAC +
Preference number: 5 (lower is better)
Translates to: TRPRRCSERGASPQP*GSGSSPRPPPSPPY
Trigger: GTAAGGTGGGCTCGGTGGTGGCCGTGGGCTGGATCCGCTCCCGCAAGGCTGTGGACTGGCGCCTCTTTCGGAACATCTTCGTGGCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS GCA 90 bp GCTGCCCGCAGAAGTGCCTTCCGAGGTCCCCAGTGTCTCCCCTGCTaGTCCCGTGAGCGGGATGGTGCTGTCATCATTAGCCTTGGCACC +
Preference number: 5 (lower is better)
Translates to: AARRSAFRGPQCLPC*SRERDGAVIISLGT
Trigger: GGTGCCAAGGCTAATGATGACAGCACCATCCCGCTCACGGGAGCAGCAGGGGAGACACTGGGGACCTCGGAAGGCACTTCTGCGGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342228.7
ENST00000518660.5
ENST00000520179.5
ENST00000520262.6
ENST00000522401.1
CDS TCA 90 bp GGACACGGTGTCGCCCACCAGCTTCTCACTGTCCTCTGGGGCCGATaGGTCCGCAGCTCGAAAGGTGGCGTGCACTGGCAGCCCACAAAT +
Preference number: 5 (lower is better)
Translates to: GHGVAHQLLTVLWGR*VRSSKGGVHWQPTN
Trigger: ATTTGTGGGCTGCCAGTGCACGCCACCTTTCGAGCTGCGGACTCATCGGCCCCAGAGGACAGTGAGAAGCTGGTGGGCGACACCGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS-3UTR CAA 90 bp GTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCATCCATGGCCATTTaGGAAAGTGGGTGCCGGGTA +
Preference number: 5 (lower is better)
Translates to: VGATAWRMLGDGVTATHCSSMAI*ESGCRV
Trigger: TACCCGGCACCCACTTTCCAAAATGGCCATGGATGA...GCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp CCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGTCATCCATGGCCATTTaGGAAAGTGGGTGCCGGGTA +
Preference number: 5 (lower is better)
Translates to: PRRGACWVTVSPPHTALGSSMAI*ESGCRV
Trigger: TACCCGGCACCCACTTTCCAAAATGGCCATGGATGA...CCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp CCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCTGGGGGTCTCCACCGTCTCGTaGTACAGGTTCACGTCAATG +
Preference number: 5 (lower is better)
Translates to: PRRGACWVTVSPPHTALGVSTVS*YRFTSM
Trigger: CATTGACGTGAACCTGTACAACGAGACGGTGGAGAC...CCCCAGAGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS TCA 90 bp GCTGACTGGAAGCCCGATGTTGGAGGCGATCACCACTGTGAAGGCTaGGGCCAGCTCGATCGTGAAGCCGCTGGACGGCGTGATGGGAGT +
Preference number: 5 (lower is better)
Translates to: ADWKPDVGGDHHCEG*GQLDREAAGRRDGS
Trigger: ACTCCCATCACGCCGTCCAGCGGCTTCACGATCGAGCTGGCCTCAGCCTTCACAGTGGTGATCGCCTCCAACATCGGGCTTCCAGTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CCA 90 bp GCCCCGAGTCTTTGTGCACGGTGTGGTACACATGACCGTCGCTCCTaGTGTGGCCGTCGAAGCCGAAGGTGCCGTTGGAGATGGGCGATT +
Preference number: 5 (lower is better)
Translates to: APSLCARCGTHDRRS*CGRRSRRCRWRWAI
Trigger: AATCGCCCATCTCCAACGGCACCTTCGGCTTCGACGGCCACACCAGGAGCGACGGTCATGTGTACCACACCGTGCACAAAGACTCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CCA 90 bp GCTTCTCACTGTCCTCTGGGGCCGATGAGTCCGCAGCTCGAAAGGTaGCGTGCACTGGCAGCCCACAAATGGCTGCGGTGTAGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: ASHCPLGPMSPQLER*RALAAHKWLRCSRC
Trigger: ACACCTGCTACACCGCAGCCATTTGTGGGCTGCCAGTGCACGCCACCTTTCGAGCTGCGGACTCATCGGCCCCAGAGGACAGTGAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS-3UTR CAA 90 bp GTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCGTCAGGACAGTTCATTaGGTTGTGTTCAGTCAGCGG +
Preference number: 5 (lower is better)
Translates to: VGATAWRMLGDGVTATHCVRTVH*VVFSQR
Trigger: CCGCTGACTGAACACAACCAAATGAACTGTCCTGAC...GCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGAAGCCGAAGGTGCCGTaGGAGATGGGCGATTTCACA +
Preference number: 5 (lower is better)
Translates to: ELPSRCHPTARDLCRVRLKPKVP*EMGDFT
Trigger: TGTGAAATCGCCCATCTCCAACGGCACCTTCGGCTT...CAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS GCA 90 bp CGGTGTAGCAGGTGTAACTGTTGTTTCGGCGCAGCAGCCGGTAGTTaGTTTCCTGGGCTGGCTTCTCCTCGGGGCCCCTGTCGATGTGGA +
Preference number: 5 (lower is better)
Translates to: RCSRCNCCFGAAAGS*FPGLASPRGPCRCG
Trigger: TCCACATCGACAGGGGCCCCGAGGAGAAGCCAGCCCAGGAAAGCAACTACCGGCTGCTGCGCCGAAACAACAGTTACACCTGCTACACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CCA 90 bp CGTCGCTCCTGGTGTGGCCGTCGAAGCCGAAGGTGCCGTTGGAGATaGGCGATTTCACAGAGCCATGGGTCATGGACAGTGCTCTTCCGT +
Preference number: 5 (lower is better)
Translates to: RRSWCGRRSRRCRWR*AISQSHGSWTVLFR
Trigger: ACGGAAGAGCACTGTCCATGACCCATGGCTCTGTGAAATCGCCCATCTCCAACGGCACCTTCGGCTTCGACGGCCACACCAGGAGCGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342228.7
ENST00000518660.5
ENST00000520179.5
ENST00000520262.6
CDS CCA 90 bp CATGACCGTCGCTCCTGGTGTGGCCGTCGAAGCCGAAGGTGCCGTTaGAGATGGGCGATTTCACAGAGCCATGGGTCATGGACAGTGCTC +
Preference number: 5 (lower is better)
Translates to: HDRRSWCGRRSRRCR*RWAISQSHGSWTVL
Trigger: GAGCACTGTCCATGACCCATGGCTCTGTGAAATCGCCCATCTCCAACGGCACCTTCGGCTTCGACGGCCACACCAGGAGCGACGGTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342228.7
ENST00000518660.5
ENST00000520179.5
ENST00000520262.6
CDS-3UTR CAA 90 bp GAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGGTCTCCACCGTCTCGTaGTACAGGTTCACGTCAATG +
Preference number: 5 (lower is better)
Translates to: ELPSRCHPTARDLCRVRLVSTVS*YRFTSM
Trigger: CATTGACGTGAACCTGTACAACGAGACGGTGGAGAC...CAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GCCTCCTGGAAGGGAGGCAGAGAGCTGGTCATGAGAGAGCCGTGCACGGCCAGGAGTGCGTTCCTGAGATaGGAAGCCTCAGGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: ASWKGGRELVMREPCTARSAFLR*EASGRK
Trigger: CTTCCTTCCTGAGGCTTCCAATCTCAGGAACGCACT...CCTGGCCGTGCACGGCTCTCTCATGACCAGCTCTCTGCCTCCCTTCCAGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GAAAGGCCACTGCAAGGTGGGTGGGATCTGGGGTGTGGTGGCGGTGGCACTGCTAAGCCGAAGGTGCCGTaGGAGATGGGCGATTTCACA +
Preference number: 5 (lower is better)
Translates to: ERPLQGGWDLGCGGGGTAKPKVP*EMGDFT
Trigger: TGTGAAATCGCCCATCTCCAACGGCACCTTCGGCTT...AGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGTGGCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp AGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACACGCCAGTCCACAGCCTaGCGGGAGCGGATCCAGCCC +
Preference number: 5 (lower is better)
Translates to: STRPLQGQVACSEAHYLTRQSTA*RERIQP
Trigger: GGGCTGGATCCGCTCCCGCAAGGCTGTGGACTGGCG...TGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GTGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCAAACTGACTCTGGACTaGACATGTAGTGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: VGATAWRMLGDGVTATHCKLTLD*TCSAQP
Trigger: TGGCTGAGCACTACATGTCAAGTCCAGAGTCAGTTT...GCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS GCA 90 bp GGTACACATGACCGTCGCTCCTGGTGTGGCCGTCGAAGCCGAAGGTaGCGTTGGAGATGGGCGATTTCACAGAGCCATGGGTCATGGACA +
Preference number: 5 (lower is better)
Translates to: GTHDRRSWCGRRSRR*RWRWAISQSHGSWT
Trigger: TGTCCATGACCCATGGCTCTGTGAAATCGCCCATCTCCAACGGCACCTTCGGCTTCGACGGCCACACCAGGAGCGACGGTCATGTGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342228.7
ENST00000518660.5
ENST00000520179.5
ENST00000520262.6
CDS CCA 90 bp ATGAGTCCGCAGCTCGAAAGGTGGCGTGCACTGGCAGCCCACAAATaGCTGCGGTGTAGCAGGTGTAACTGTTGTTTCGGCGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: MSPQLERWRALAAHK*LRCSRCNCCFGAAA
Trigger: GGCTGCTGCGCCGAAACAACAGTTACACCTGCTACACCGCAGCCATTTGTGGGCTGCCAGTGCACGCCACCTTTCGAGCTGCGGACTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS-3UTR CAA 90 bp GAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCTCTGCAGGGTCAGGTTGCTGCTAGCTGCTGGTTaGCAAACTACTGTCAGGACA +
Preference number: 5 (lower is better)
Translates to: ELPSRCHPTARDLCRVRLLLAAG*QTTVRT
Trigger: TGTCCTGACAGTAGTTTGCAAACCAGCAGCTAGCAG...CAACCTGACCCTGCAGAGGTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GCCTCCTGGAAGGGAGGCAGAGAGCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGGTTTCTCCTACTTaGGCGCCTAGTAACACGGAG +
Preference number: 5 (lower is better)
Translates to: ASWKGGRELVMREPCTARMVSPT*APSNTE
Trigger: CTCCGTGTTACTAGGCGCCAAAGTAGGAGAAACCAT...CCTGGCCGTGCACGGCTCTCTCATGACCAGCTCTCTGCCTCCCTTCCAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GAAAGGCCACTGCAAGGTGGGTGGGATCTGGGGTGTGGTGGCGGTGGCACTGCTATCCACTGCACACCTTaGGTACCGATTGCGACCAGT +
Preference number: 5 (lower is better)
Translates to: ERPLQGGWDLGCGGGGTAIHCTP*VPIATS
Trigger: ACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGAT...AGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGTGGCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp TGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTTTGCGTTACCCCGCCTaGTTTGTAAATCAGCCACAA +
Preference number: 5 (lower is better)
Translates to: WEPRRGACWVTVSPPHTALRYPA*FVNQPQ
Trigger: TTGTGGCTGATTTACAAACAAGGCGGGGTAACGCAA...AGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS CCA 90 bp CCGCGTTACAGTAGCTCGAGTAGCTGTCGTAGCGCAGCCTCTTCTTaGAGTAGGACACGGTGTCGCCCACCAGCTTCTCACTGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PRYSSSSSCRSAASS*SRTRCRPPASHCPL
Trigger: CAGAGGACAGTGAGAAGCTGGTGGGCGACACCGTGTCCTACTCCAAGAAGAGGCTGCGCTACGACAGCTACTCGAGCTACTGTAACGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS-3UTR CAA 90 bp GAAAGGCCACTGCAAGGTGGGTGGGATCTGGGGTGTGGTGGCGGTGGCACTGCTGCTGTACCAAAGGAGTaGGCAACATCGTTTGCACCA +
Preference number: 5 (lower is better)
Translates to: ERPLQGGWDLGCGGGGTAAVPKE*ATSFAP
Trigger: TGGTGCAAACGATGTTGCCAACTCCTTTGGTACAGC...AGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGTGGCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GAAAGGCCACTGCAAGGTGGGTGGGATCTGGGGTGTGGTGGCGGTGGCACTGCTCACCTTTGGTACCGATaGCGACCAGTGAGAATCCTA +
Preference number: 5 (lower is better)
Translates to: ERPLQGGWDLGCGGGGTAHLWYR*RPVRIL
Trigger: TAGGATTCTCACTGGTCGCAATCGGTACCAAAGGTG...AGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGTGGCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GCCTCCTGGAAGGGAGGCAGAGAGCTGGTCATGAGAGAGCCGTGCACGGCCAGGGGACAGTTCATTTGGTaGTGTTCAGTCAGCGGTAAA +
Preference number: 5 (lower is better)
Translates to: ASWKGGRELVMREPCTARGQFIW*CSVSGK
Trigger: TTTACCGCTGACTGAACACAACCAAATGAACTGTCC...CCTGGCCGTGCACGGCTCTCTCATGACCAGCTCTCTGCCTCCCTTCCAGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GAAAGGCCACTGCAAGGTGGGTGGGATCTGGGGTGTGGTGGCGGTGGCACTGCTCTGTCATCATTAGCCTaGGCACCTGGTAGCTCTTTA +
Preference number: 5 (lower is better)
Translates to: ERPLQGGWDLGCGGGGTALSSLA*APGSSL
Trigger: TAAAGAGCTACCAGGTGCCAAGGCTAATGATGACAG...AGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGTGGCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GTCTCCGCAGCCTGGGTGAACAGTGTGGGATGGAGCCTCCTGGAAGGGAGGCAGCTGTCATCATTAGCCTaGGCACCTGGTAGCTCTTTA +
Preference number: 5 (lower is better)
Translates to: VSAAWVNSVGWSLLEGRQLSSLA*APGSSL
Trigger: TAAAGAGCTACCAGGTGCCAAGGCTAATGATGACAG...CTGCCTCCCTTCCAGGAGGCTCCATCCCACACTGTTCACCCAGGCTGCGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp TTCAGTGAAAGCACTTGTGAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACGGGTGTAGCTGCTTCTaGCGTTACCCCGCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: FSESTCELPSRCHPTARDGCSCF*RYPALF
Trigger: AAACAAGGCGGGGTAACGCAAGAAGCAGCTACACCC...GTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTCACAAGTGCTTTCACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GAAAGGCCACTGCAAGGTGGGTGGGATCTGGGGTGTGGTGGCGGTGGCACTGCTTCCTTTGTGCTGACATaGGAGACAAGGATCCGTTCT +
Preference number: 5 (lower is better)
Translates to: ERPLQGGWDLGCGGGGTASFVLT*ETRIRS
Trigger: AGAACGGATCCTTGTCTCCAATGTCAGCACAAAGGA...AGCAGTGCCACCGCCACCACACCCCAGATCCCACCCACCTTGCAGTGGCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS CCA 90 bp CTCTCTCTTGCAGACAGGTATCCTGCAACATGGATCCCTAAAACATaGCGATGCCCTCAGGAGGCACTGTCCATCTGCAGCCTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LSLADRYPATWIPKT*RCPQEALSICSLLP
Trigger: GGGCAGCAGGCTGCAGATGGACAGTGCCTCCTGAGGGCATCGCCATGTTTTAGGGATCCATGTTGCAGGATACCTGTCTGCAAGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522707.1
CDS-3UTR CAA 90 bp TGGGAGCCACGGCGTGGCGCATGCTGGGTGACGGTGTCACCGCCACACACTGCTCCTTCTTTTTGTAATTaGCCTGTTATTTTCCTCCGC +
Preference number: 5 (lower is better)
Translates to: WEPRRGACWVTVSPPHTAPSFCN*PVIFLR
Trigger: GCGGAGGAAAATAACAGGCAAATTACAAAAAGAAGG...AGCAGTGTGTGGCGGTGACACCGTCACCCAGCATGCGCCACGCCGTGGCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTTGCAGCACTGGAAGCCCGATGTaGGAGGCGATCACCACTGTG +
Preference number: 5 (lower is better)
Translates to: AHMSPTRQHQTIPLAVCSTGSPM*EAITTV
Trigger: CACAGTGGTGATCGCCTCCAACATCGGGCTTCCAGT...GCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp TTCAGTGAAAGCACTTGTGAGCTCCCGTCCCGCTGTCATCCCACAGCACGCGACCTCTGCAGGGTCAGGTaGCCTGTTCTGAAGCTCATT +
Preference number: 5 (lower is better)
Translates to: FSESTCELPSRCHPTARDLCRVR*PVLKLI
Trigger: AATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAG...GTCGCGTGCTGTGGGATGACAGCGGGACGGGAGCTCACAAGTGCTTTCACTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS GCA 90 bp CTTGCAGACAGGTATCCTGCAACATGGATCCCTAAAACATGGCGATaGCCTCAGGAGGCACTGTCCATCTGCAGCCTGCTGCCCAAAGCA +
Preference number: 5 (lower is better)
Translates to: LADRYPATWIPKTWR*PQEALSICSLLPKA
Trigger: TGCTTTGGGCAGCAGGCTGCAGATGGACAGTGCCTCCTGAGGGCATCGCCATGTTTTAGGGATCCATGTTGCAGGATACCTGTCTGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522707.1
CDS-3UTR CAA 90 bp GATGTGTATGTGCGGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCAATCCACTGCACACCTTaGGTACCGATTGCGACCAGT +
Preference number: 5 (lower is better)
Translates to: DVYVRHEHTCLPHANTRPIHCTP*VPIATS
Trigger: ACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGAT...TGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCCGCACATACACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTCTCTGCAGGGTCAGGTaGCCTGTTCTGAAGCTCATT +
Preference number: 5 (lower is better)
Translates to: GTSTHVSHTPTPDHPFSCLCRVR*PVLKLI
Trigger: AATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAG...ACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTTGCAGCTGGGGGTGTCCAGCTTaGTGTGGGCCTCAGAGAAAT +
Preference number: 5 (lower is better)
Translates to: AHMSPTRQHQTIPLAVCSWGCPA*CGPQRN
Trigger: ATTTCTCTGAGGCCCACACAAAGCTGGACACCCCCA...GCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS GCA 90 bp AAACATGGCGATGCCCTCAGGAGGCACTGTCCATCTGCAGCCTGCTaGCCAAAGCACAAACCGGTTGATCTTCATTGGTGTGAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: KHGDALRRHCPSAAC*PKHKPVDLHWCELD
Trigger: GTCCAACTCACACCAATGAAGATCAACCGGTTTGTGCTTTGGGCAGCAGGCTGCAGATGGACAGTGCCTCCTGAGGGCATCGCCATGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522707.1
CDS CCA 90 bp GGCTTGCAGCCCAGGCTTCATTCAAGGGCACTTCCTCCTAATTCCTaGACAGCTGGTGTGGTGATGTATACACTCCCCTATCTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: GLQPRLHSRALPPNS*TAGVVMYTLPYLWS
Trigger: GCTCCACAGATAGGGGAGTGTATACATCACCACACCAGCTGTCCAGGAATTAGGAGGAAGTGCCCTTGAATGAAGCCTGGGCTGCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519463.1
CDS-3UTR CAA 90 bp GATGTGTATGTGCGGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCAGTCAGGACAGTTCATTaGGTTGTGTTCAGTCAGCGG +
Preference number: 5 (lower is better)
Translates to: DVYVRHEHTCLPHANTRPVRTVH*VVFSQR
Trigger: CCGCTGACTGAACACAACCAAATGAACTGTCCTGAC...TGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCCGCACATACACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTCTGCTAGCTGCTGGTTaGCAAACTACTGTCAGGACA +
Preference number: 5 (lower is better)
Translates to: GTSTHVSHTPTPDHPFSCLLAAG*QTTVRT
Trigger: TGTCCTGACAGTAGTTTGCAAACCAGCAGCTAGCAG...ACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GATGTGTATGTGCGGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCAATGGTTTCTCCTACTTaGGCGCCTAGTAACACGGAG +
Preference number: 5 (lower is better)
Translates to: DVYVRHEHTCLPHANTRPMVSPT*APSNTE
Trigger: CTCCGTGTTACTAGGCGCCAAAGTAGGAGAAACCAT...TGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCCGCACATACACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTTGCAGCAGTGCGTTCCTGAGATaGGAAGCCTCAGGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: AHMSPTRQHQTIPLAVCSSAFLR*EASGRK
Trigger: CTTCCTTCCTGAGGCTTCCAATCTCAGGAACGCACT...GCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS GCA 90 bp CGCCTAGTAACACGGAGCCGGTGGTTTCAAATATTGAAGCTAAAATaGATGCCTGCCTCAAGGTCACCACACCAGAGCCCACGGCTGTAC +
Preference number: 5 (lower is better)
Translates to: RLVTRSRWFQILKLK*MPASRSPHQSPRLY
Trigger: GTACAGCCGTGGGCTCTGGTGTGGTGACCTTGAGGCAGGCATGCATTTTAGCTTCAATATTTGAAACCACCGGCTCCGTGTTACTAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342228.7
ENST00000517366.1
ENST00000518717.1
ENST00000520179.5
ENST00000520262.6
ENST00000524211.1
CDS-3UTR CAA 90 bp GCTGGTCATGAGAGAGCCGTGCACGGCCAGGATGTGTATGTGCGGCACGAGCACATGATGGAAAAGACATaGATTGCTATGGTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: AGHERAVHGQDVYVRHEHMMEKT*IAMVAA
Trigger: TGCTGCTACCATAGCAATCAATGTCTTTTCCATCAT...GTGCTCGTGCCGCACATACACATCCTGGCCGTGCACGGCTCTCTCATGACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp GGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTTGCGTTACCCCGCCTaGTTTGTAAATCAGCCACAA +
Preference number: 5 (lower is better)
Translates to: GTSTHVSHTPTPDHPFSCLRYPA*FVNQPQ
Trigger: TTGTGGCTGATTTACAAACAAGGCGGGGTAACGCAA...ACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS TCA 90 bp ACATTTATGGCCACACTCAGACATCAACACACAGTCACACACCACTaGCCACACTGCCAATGCAGGGTCAAGAAACCCCTGCCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: TFMATLRHQHTVTHH*PHCQCRVKKPLPQA
Trigger: AGCTTGGGGCAGGGGTTTCTTGACCCTGCATTGGCAGTGTGGTCAGTGGTGTGTGACTGTGTGTTGATGTCTGAGTGTGGCCATAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518660.5
CDS-3UTR CAA 90 bp GATGTGTATGTGCGGCACGAGCACACATGTCTCCCACACGCCAACACCAGACCAGGACAGTTCATTTGGTaGTGTTCAGTCAGCGGTAAA +
Preference number: 5 (lower is better)
Translates to: DVYVRHEHTCLPHANTRPGQFIW*CSVSGK
Trigger: TTTACCGCTGACTGAACACAACCAAATGAACTGTCC...TGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGCTCGTGCCGCACATACACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp ACACAGCGGAACCTCCTGCTGCAGGACTCTTCCTACAAGAGGATATGTCCTGTTATCCACTGCACACCTTaGGTACCGATTGCGACCAGT +
Preference number: 5 (lower is better)
Translates to: TQRNLLLQDSSYKRICPVIHCTP*VPIATS
Trigger: ACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGAT...AACAGGACATATCCTCTTGTAGGAAGAGTCCTGCAGCAGGAGGTTCCGCTGTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS CCA 90 bp CCTAACAAGCCCTGTGACTTGGCAGAGCTGACCTTCACACATTTATaGCCACACTCAGACATCAACACACAGTCACACACCACTGACCAC +
Preference number: 5 (lower is better)
Translates to: PNKPCDLAELTFTHL*PHSDINTQSHTTDH
Trigger: GTGGTCAGTGGTGTGTGACTGTGTGTTGATGTCTGAGTGTGGCCATAAATGTGTGAAGGTCAGCTCTGCCAAGTCACAGGGCTTGTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518660.5
CDS CCA 90 bp GGCTTGCAGCCCAGGCTTCATTCAAGGGCACTTCCTCCTAATTCCTaGACAGCTGGTGTGGTGATGTATACACTCCCCTATACTGACAAT +
Preference number: 5 (lower is better)
Translates to: GLQPRLHSRALPPNS*TAGVVMYTLPYTDN
Trigger: ATTGTCAGTATAGGGGAGTGTATACATCACCACACCAGCTGTCCAGGAATTAGGAGGAAGTGCCCTTGAATGAAGCCTGGGCTGCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521455.1
CDS CCA 90 bp CCATCTGCAGCCTGCTGCCCAAAGCACAAACCGGTTGATCTTCATTaGTGTGAGTTGGACATCACCAGCACAATCTCCCTCCTGTTGTTT +
Preference number: 5 (lower is better)
Translates to: PSAACCPKHKPVDLH*CELDITSTISLLLF
Trigger: AAACAACAGGAGGGAGATTGTGCTGGTGATGTCCAACTCACACCAATGAAGATCAACCGGTTTGTGCTTTGGGCAGCAGGCTGCAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522707.1
CDS-3UTR CAA 90 bp ATCTTGACAAGCTCCATCCACTGCACACCTTTGGTACCGATTGCGACCAGTGAGCTGCTAGCTGCTGGTTaGCAAACTACTGTCAGGACA +
Preference number: 5 (lower is better)
Translates to: ILTSSIHCTPLVPIATSELLAAG*QTTVRT
Trigger: TGTCCTGACAGTAGTTTGCAAACCAGCAGCTAGCAG...CTCACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CAA 90 bp TTGACAAGCTCCATCCACTGCACACCTTTGGTACCGATTGCGACCAGTGAGAATGTCTCCACCGTCTCGTaGTACAGGTTCACGTCAATG +
Preference number: 5 (lower is better)
Translates to: LTSSIHCTPLVPIATSENVSTVS*YRFTSM
Trigger: CATTGACGTGAACCTGTACAACGAGACGGTGGAGAC...ATTCTCACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CAA 90 bp AGCACGCGACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAAAACTGACTCTGGACTaGACATGTAGTGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: STRPLQGQVACSEAHYLTKLTLD*TCSAQP
Trigger: TGGCTGAGCACTACATGTCAAGTCCAGAGTCAGTTT...TGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTCGCGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS GCA 90 bp CACTCACAGGCATCTGACACATTATTATTTAGTCCTGGAAATGGTTaGCGCGCCACAGGCTTTAGGAGGCTTCCTGTGGGAATAAGCCTG +
Preference number: 5 (lower is better)
Translates to: HSQASDTLLFSPGNG*RATGFRRLPVGISL
Trigger: CAGGCTTATTCCCACAGGAAGCCTCCTAAAGCCTGTGGCGCGGCAACCATTTCCAGGACTAAATAATAATGTGTCAGATGCCTGTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523340.1
CDS CCA 90 bp ACTGTTACAAGAAACTCTTCCCAAACCCCAGTGTGGCCAAAAGGATaGGCGTTGTCACTGCCTGTGATCTGCTCCACTTCTGCAGAAATG +
Preference number: 5 (lower is better)
Translates to: TVTRNSSQTPVWPKG*ALSLPVICSTSAEM
Trigger: CATTTCTGCAGAAGTGGAGCAGATCACAGGCAGTGACAACGCCCATCCTTTTGGCCACACTGGGGTTTGGGAAGAGTTTCTTGTAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522401.1
CDS-3UTR CAA 90 bp AGAAGCAACAATCTTGACAAGCTCCATCCACTGCACACCTTTGGTACCGATTGCTCATCCATGGCCATTTaGGAAAGTGGGTGCCGGGTA +
Preference number: 5 (lower is better)
Translates to: RSNNLDKLHPLHTFGTDCSSMAI*ESGCRV
Trigger: TACCCGGCACCCACTTTCCAAAATGGCCATGGATGA...GCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAAGATTGTTGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CAA 90 bp GAAGCAACAATCTTGACAAGCTCCATCCACTGCACACCTTTGGTACCGATTGCGGCTGTACCAAAGGAGTaGGCAACATCGTTTGCACCA +
Preference number: 5 (lower is better)
Translates to: EATILTSSIHCTPLVPIAAVPKE*ATSFAP
Trigger: TGGTGCAAACGATGTTGCCAACTCCTTTGGTACAGC...CGCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAAGATTGTTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CAA 90 bp GCACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTTGCAGCACGTCAATGATACCTTaGCGAATGGTTTCTCCTACT +
Preference number: 5 (lower is better)
Translates to: AHMSPTRQHQTIPLAVCSTSMIP*RMVSPT
Trigger: AGTAGGAGAAACCATTCGCAAAGGTATCATTGACGT...GCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp AGAAGCAACAATCTTGACAAGCTCCATCCACTGCACACCTTTGGTACCGATTGCAGTGCGTTCCTGAGATaGGAAGCCTCAGGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: RSNNLDKLHPLHTFGTDCSAFLR*EASGRK
Trigger: CTTCCTTCCTGAGGCTTCCAATCTCAGGAACGCACT...GCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAAGATTGTTGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CAA 90 bp GAAGCAACAATCTTGACAAGCTCCATCCACTGCACACCTTTGGTACCGATTGCGCACCTTTGGTACCGATaGCGACCAGTGAGAATCCTA +
Preference number: 5 (lower is better)
Translates to: EATILTSSIHCTPLVPIAHLWYR*RPVRIL
Trigger: TAGGATTCTCACTGGTCGCAATCGGTACCAAAGGTG...CGCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAAGATTGTTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CAA 90 bp GACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAGTATATTTGGGGGTGTCCAGCTTaGTGTGGGCCTCAGAGAAAT +
Preference number: 5 (lower is better)
Translates to: DLCRVRLPVLKLITLQYIWGCPA*CGPQRN
Trigger: ATTTCTCTGAGGCCCACACAAAGCTGGACACCCCCA...AATATACTGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS TCA 90 bp GCCTTGGCACCTGGTAGCTCTTTAAATACTGGGGACTCTGCTTCCTaGACCTTACTGAGGCTTTCGTCAGATACTCGTGATAAAGCACCT +
Preference number: 5 (lower is better)
Translates to: ALAPGSSLNTGDSAS*TLLRLSSDTRDKAP
Trigger: AGGTGCTTTATCACGAGTATCTGACGAAAGCCTCAGTAAGGTTCAGGAAGCAGAGTCCCCAGTATTTAAAGAGCTACCAGGTGCCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342228.7
ENST00000518660.5
ENST00000520179.5
ENST00000520262.6
ENST00000522401.1
CDS GCA 90 bp CACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTTaGAGCTGGAAGAAGACAAATCACACATATGGAAGGATCCCATAC +
Preference number: 5 (lower is better)
Translates to: HMSPTRQHQTIPLAV*SWKKTNHTYGRIPY
Trigger: GTATGGGATCCTTCCATATGTGTGATTTGTCTTCTTCCAGCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp ATCTTGACAAGCTCCATCCACTGCACACCTTTGGTACCGATTGCGACCAGTGAGGGACAGTTCATTTGGTaGTGTTCAGTCAGCGGTAAA +
Preference number: 5 (lower is better)
Translates to: ILTSSIHCTPLVPIATSEGQFIW*CSVSGK
Trigger: TTTACCGCTGACTGAACACAACCAAATGAACTGTCC...CTCACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CAA 90 bp TTGGTACCGATTGCGACCAGTGAGAATCCTATAGTAGAACCCACAATGCAGTGCATGGTTTCTCCTACTTaGGCGCCTAGTAACACGGAG +
Preference number: 5 (lower is better)
Translates to: LVPIATSENPIVEPTMQCMVSPT*APSNTE
Trigger: CTCCGTGTTACTAGGCGCCAAAGTAGGAGAAACCAT...GCACTGCATTGTGGGTTCTACTATAGGATTCTCACTGGTCGCAATCGGTACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CAA 90 bp ATCTTGACAAGCTCCATCCACTGCACACCTTTGGTACCGATTGCGACCAGTGAGTACATCAGCTGTCTGTaGTGTCGTCATCTCTACCAA +
Preference number: 5 (lower is better)
Translates to: ILTSSIHCTPLVPIATSEYISCL*CRHLYQ
Trigger: TTGGTAGAGATGACGACACAACAGACAGCTGATGTA...CTCACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS CCA 90 bp TCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTTGCAGCTaGAAGAAGACAAATCACACATATGGAAGGATCCCATACATGAGA +
Preference number: 5 (lower is better)
Translates to: SPTRQHQTIPLAVCS*KKTNHTYGRIPYMR
Trigger: TCTCATGTATGGGATCCTTCCATATGTGTGATTTGTCTTCTTCCAGCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS CCA 90 bp CATCCCTTTAGCTGTTTGCAGCTGGAAGAAGACAAATCACACATATaGAAGGATCCCATACATGAGAAGAGCCATGACAGCAGCGCTGAA +
Preference number: 5 (lower is better)
Translates to: HPFSCLQLEEDKSHI*KDPIHEKSHDSSAE
Trigger: TTCAGCGCTGCTGTCATGGCTCTTCTCATGTATGGGATCCTTCCATATGTGTGATTTGTCTTCTTCCAGCTGCAAACAGCTAAAGGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS TCA 90 bp GCAACTTTAATTCAGAACCTAACAAGCCCTGTGACTTGGCAGAGCTaGCCTTCACACATTTATGGCCACACTCAGACATCAACACACAGT +
Preference number: 5 (lower is better)
Translates to: ATLIQNLTSPVTWQS*PSHIYGHTQTSTHS
Trigger: ACTGTGTGTTGATGTCTGAGTGTGGCCATAAATGTGTGAAGGTCAGCTCTGCCAAGTCACAGGGCTTGTTAGGTTCTGAATTAAAGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518660.5
CDS-3UTR CAA 90 bp GAAGCAACAATCTTGACAAGCTCCATCCACTGCACACCTTTGGTACCGATTGCGCGGTGGTTTCAAATATaGAAGCTAAAATGCATGCCT +
Preference number: 5 (lower is better)
Translates to: EATILTSSIHCTPLVPIARWFQI*KLKCMP
Trigger: AGGCATGCATTTTAGCTTCAATATTTGAAACCACCG...CGCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAAGATTGTTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CAA 90 bp GCGACCAGTGAGAATCCTATAGTAGAACCCACAATGCAGTGCGTTCCTGAGATTACGTCAATGATACCTTaGCGAATGGTTTCTCCTACT +
Preference number: 5 (lower is better)
Translates to: ATSENPIVEPTMQCVPEITSMIP*RMVSPT
Trigger: AGTAGGAGAAACCATTCGCAAAGGTATCATTGACGT...AATCTCAGGAACGCACTGCATTGTGGGTTCTACTATAGGATTCTCACTGGTCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CAA 90 bp TGGAGACAAGGATCCGTTCTTCAGGCTGCAGGGAGAATTGGGATAGAAACTGACCCTTCTTTTTGTAATTaGCCTGTTATTTTCCTCCGC +
Preference number: 5 (lower is better)
Translates to: WRQGSVLQAAGRIGIETDPSFCN*PVIFLR
Trigger: GCGGAGGAAAATAACAGGCAAATTACAAAAAGAAGG...GTCAGTTTCTATCCCAATTCTCCCTGCAGCCTGAAGAACGGATCCTTGTCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS GCA 90 bp GGAGATATAAACCAAGAAGCAACAATCTTGACAAGCTCCATCCACTaGACACCTTTGGTACCGATTGCGACCAGTGAGAATCCTATAGTA +
Preference number: 5 (lower is better)
Translates to: GDINQEATILTSSIH*TPLVPIATSENPIV
Trigger: TACTATAGGATTCTCACTGGTCGCAATCGGTACCAAAGGTGTGCAGTGGATGGAGCTTGTCAAGATTGTTGCTTCTTGGTTTATATCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CCA 90 bp TGTTCAGTCAGCGGTAAAACACATTCCATATTTTTCCTCCCGATCTaGGAAAGCTGTGATGTCTCCTCCTCCTATTTCTCTGTCCATACA +
Preference number: 5 (lower is better)
Translates to: CSVSGKTHSIFFLPI*ESCDVSSSYFSVHT
Trigger: TGTATGGACAGAGAAATAGGAGGAGGAGACATCACAGCTTTCCCAGATCGGGAGGAAAAATATGGAATGTGTTTTACCGCTGACTGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS-3UTR CAA 90 bp TCCACTCCCAACTTGAATATGTTTGAAATAATGCTGCCTATTCTATGGATACAAACTGGAAGCCCGATGTaGGAGGCGATCACCACTGTG +
Preference number: 5 (lower is better)
Translates to: STPNLNMFEIMLPILWIQTGSPM*EAITTV
Trigger: CACAGTGGTGATCGCCTCCAACATCGGGCTTCCAGT...TTGTATCCATAGAATAGGCAGCATTATTTCAAACATATTCAAGTTGGGAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS CCA 90 bp TCTGATGAGTACAAACAGCAGGCCAGACATGAAACCAGACAACAGTaGAGATATAAACCAAGAAGCAACAATCTTGACAAGCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: SDEYKQQARHETRQQ*RYKPRSNNLDKLHP
Trigger: TGGATGGAGCTTGTCAAGATTGTTGCTTCTTGGTTTATATCTCCACTGTTGTCTGGTTTCATGTCTGGCCTGCTGTTTGTACTCATCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CCA 90 bp GGAAGACAAGGAGACAGAGTGGAAGGTCAGGATCCCAGCAGCATTTaGAGCCAACACAGACAAAATGATACAAAATACTGTTACAAGAAA +
Preference number: 5 (lower is better)
Translates to: GRQGDRVEGQDPSSI*SQHRQNDTKYCYKK
Trigger: TTTCTTGTAACAGTATTTTGTATCATTTTGTCTGTGTTGGCTCCAAATGCTGCTGGGATCCTGACCTTCCACTCTGTCTCCTTGTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522401.1
CDS-3UTR CAA 90 bp GACCTCTGCAGGGTCAGGTTGCCTGTTCTGAAGCTCATTACCTTACAGTATATTCGGTGGTTTCAAATATaGAAGCTAAAATGCATGCCT +
Preference number: 5 (lower is better)
Translates to: DLCRVRLPVLKLITLQYIRWFQI*KLKCMP
Trigger: AGGCATGCATTTTAGCTTCAATATTTGAAACCACCG...AATATACTGTAAGGTAATGAGCTTCAGAACAGGCAACCTGACCCTGCAGAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp TCCACTCCCAACTTGAATATGTTTGAAATAATGCTGCCTATTCTATGGATACAAGGGTGTAGCTGCTTCTaGCGTTACCCCGCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: STPNLNMFEIMLPILWIQGCSCF*RYPALF
Trigger: AAACAAGGCGGGGTAACGCAAGAAGCAGCTACACCC...TTGTATCCATAGAATAGGCAGCATTATTTCAAACATATTCAAGTTGGGAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS TCA 90 bp AGGAATTATTCAATGAAAGCCAATTTCTGGGGACCAACATCCCAGTaGACTGTTCCTATTTGTTCTCCCACTGTTGTTACCTCCTATTTC +
Preference number: 5 (lower is better)
Translates to: RNYSMKANFWGPTSQ*TVPICSPTVVTSYF
Trigger: GAAATAGGAGGTAACAACAGTGGGAGAACAAATAGGAACAGTTCACTGGGATGTTGGTCCCCAGAAATTGGCTTTCATTGAATAATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523340.1
CDS TCA 90 bp ATGAAAAAGCAATTCAGCACACGACACCCTTTAGGAATTATTCAATaGAAGCCAATTTCTGGGGACCAACATCCCAGTGAACTGTTCCTA +
Preference number: 5 (lower is better)
Translates to: MKKQFSTRHPLGIIQ*KPISGDQHPSELFL
Trigger: TAGGAACAGTTCACTGGGATGTTGGTCCCCAGAAATTGGCTTTCATTGAATAATTCCTAAAGGGTGTCGTGTGCTGAATTGCTTTTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523340.1
CDS GCA 90 bp TGCTGGAGTCCTGTCACTCATATTTTCAGAACTTTCTTCTTCAGCTaGTCAAAAATCCTCGATGGAATTGAAGGTGCTTCTAGAATATGC +
Preference number: 5 (lower is better)
Translates to: CWSPVTHIFRTFFFS*SKILDGIEGASRIC
Trigger: GCATATTCTAGAAGCACCTTCAATTCCATCGAGGATTTTTGAGCAGCTGAAGAAGAAAGTTCTGAAAATATGAGTGACAGGACTCCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523340.1
CDS-3UTR CAA 90 bp TCCACTCCCAACTTGAATATGTTTGAAATAATGCTGCCTATTCTATGGATACAAGCTGTACCAAAGGAGTaGGCAACATCGTTTGCACCA +
Preference number: 5 (lower is better)
Translates to: STPNLNMFEIMLPILWIQAVPKE*ATSFAP
Trigger: TGGTGCAAACGATGTTGCCAACTCCTTTGGTACAGC...TTGTATCCATAGAATAGGCAGCATTATTTCAAACATATTCAAGTTGGGAGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS CCA 90 bp TCTGATGAGTACAAACAGCAGGCCAGACATGAAACCAGACAACAGTaGAGATATAAACCAAGAAGCAACTTTAATTCAGAACCTAACAAG +
Preference number: 5 (lower is better)
Translates to: SDEYKQQARHETRQQ*RYKPRSNFNSEPNK
Trigger: CTTGTTAGGTTCTGAATTAAAGTTGCTTCTTGGTTTATATCTCCACTGTTGTCTGGTTTCATGTCTGGCCTGCTGTTTGTACTCATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518660.5
CDS-3UTR CAA 90 bp TCCACTCCCAACTTGAATATGTTTGAAATAATGCTGCCTATTCTATGGATACAAACGTCAATGATACCTTaGCGAATGGTTTCTCCTACT +
Preference number: 5 (lower is better)
Translates to: STPNLNMFEIMLPILWIQTSMIP*RMVSPT
Trigger: AGTAGGAGAAACCATTCGCAAAGGTATCATTGACGT...TTGTATCCATAGAATAGGCAGCATTATTTCAAACATATTCAAGTTGGGAGTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS-3UTR CAA 90 bp TCCACTCCCAACTTGAATATGTTTGAAATAATGCTGCCTATTCTATGGATACAACGGTGGTTTCAAATATaGAAGCTAAAATGCATGCCT +
Preference number: 5 (lower is better)
Translates to: STPNLNMFEIMLPILWIQRWFQI*KLKCMP
Trigger: AGGCATGCATTTTAGCTTCAATATTTGAAACCACCG...TTGTATCCATAGAATAGGCAGCATTATTTCAAACATATTCAAGTTGGGAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS CCA 72 bp AAAGGCGCCGCACGGCAAGCGACGGCCAGGTCCACGTaGGCCAGCAGGCGCGGGGGACGCAACCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: KGAARQATARST*ASRRGGRNPPP
Trigger: CGGCGGCGGGTTGCGTCCCCCGCGCCTGCTGGCCCACGTGGACCTGGCCGTCGCTTGCCGTGCGGCGCCTTT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523340.1
CDS GCA 72 bp GGAGGCGCCCGGCACTCGCAGGTAATGCCCGGTCCCTaGCACTTCCGTCGAGTTTTCGCAAAGGCGCCGCAC +
Preference number: 6 (lower is better)
Translates to: GGARHSQVMPGP*HFRRVFAKAPH
Trigger: GTGCGGCGCCTTTGCGAAAACTCGACGGAAGTGGCAGGGACCGGGCATTACCTGCGAGTGCCGGGCGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523340.1
CDS GCA 72 bp CGAAGATGTTCCGAAAGAGGCGCCAGTCCACAGCCTTaGGGGAGCGGATCCAGCCCACGGCCACCACCGAGC +
Preference number: 6 (lower is better)
Translates to: RRCSERGASPQP*GSGSSPRPPPS
Trigger: GCTCGGTGGTGGCCGTGGGCTGGATCCGCTCCCGCAAGGCTGTGGACTGGCGCCTCTTTCGGAACATCTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS TCA 72 bp GTCGCCCACCAGCTTCTCACTGTCCTCTGGGGCCGATaGGTCCGCAGCTCGAAAGGTGGCGTGCACTGGCAG +
Preference number: 6 (lower is better)
Translates to: VAHQLLTVLWGR*VRSSKGGVHWQ
Trigger: CTGCCAGTGCACGCCACCTTTCGAGCTGCGGACTCATCGGCCCCAGAGGACAGTGAGAAGCTGGTGGGCGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CAA 72 bp ACGAAGATGTTCCGAAAGAGGCGCCAGTCCACAGCCTaGCGGGAGCGGATCCAGCCCACGGCCACCACCGAG +
Preference number: 6 (lower is better)
Translates to: TKMFRKRRQSTA*RERIQPTATTE
Trigger: CTCGGTGGTGGCCGTGGGCTGGATCCGCTCCCGCAAGGCTGTGGACTGGCGCCTCTTTCGGAACATCTTCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CAA 90 bp AACCAGGCCACGAAGATGTTCCGAAAGAGGCGCCAGTCCACAGCCTaGCGGGAGCGGATCCAGCCCACGGCCACCACCGAGCCCACCTTA +
Preference number: 6 (lower is better)
Translates to: NQATKMFRKRRQSTA*RERIQPTATTEPTL
Trigger: TAAGGTGGGCTCGGTGGTGGCCGTGGGCTGGATCCGCTCCCGCAAGGCTGTGGACTGGCGCCTCTTTCGGAACATCTTCGTGGCCTGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS TCA 72 bp CGGCCACCACCGAGCCCACCTTACAGTGCGTGGTGCTaGCTGGAAGCCCGATGTTGGAGGCGATCACCACTG +
Preference number: 6 (lower is better)
Translates to: RPPPSPPYSAWC*LEARCWRRSPL
Trigger: CAGTGGTGATCGCCTCCAACATCGGGCTTCCAGTCAGCACCACGCACTGTAAGGTGGGCTCGGTGGTGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS GCA 72 bp TGGACAGTGCTCTTCCGTATGCAGCCCGAGGGTGGCTaGCCGCAGAAGTGCCTTCCGAGGTCCCCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: WTVLFRMQPEGG*PQKCLPRSPVS
Trigger: AGACACTGGGGACCTCGGAAGGCACTTCTGCGGGCAGCCACCCTCGGGCTGCATACGGAAGAGCACTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342228.7
ENST00000518660.5
ENST00000520179.5
ENST00000520262.6
CDS GCA 72 bp GACCGTCGCTCCTGGTGTGGCCGTCGAAGCCGAAGGTaGCGTTGGAGATGGGCGATTTCACAGAGCCATGGG +
Preference number: 6 (lower is better)
Translates to: DRRSWCGRRSRR*RWRWAISQSHG
Trigger: CCCATGGCTCTGTGAAATCGCCCATCTCCAACGGCACCTTCGGCTTCGACGGCCACACCAGGAGCGACGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342228.7
ENST00000518660.5
ENST00000520179.5
ENST00000520262.6
CDS CCA 72 bp TGTCCTCTGGGGCCGATGAGTCCGCAGCTCGAAAGGTaGCGTGCACTGGCAGCCCACAAATGGCTGCGGTGT +
Preference number: 6 (lower is better)
Translates to: CPLGPMSPQLER*RALAAHKWLRC
Trigger: ACACCGCAGCCATTTGTGGGCTGCCAGTGCACGCCACCTTTCGAGCTGCGGACTCATCGGCCCCAGAGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CCA 72 bp AAAGAAATCCTCTGCGCCGCCCGGCTACATTGCGCCTaGTGGGACAATGTACACGACCCCTCCCCCGCCGAG +
Preference number: 6 (lower is better)
Translates to: KEILCAARLHCA*WDNVHDPSPAE
Trigger: CTCGGCGGGGGAGGGGTCGTGTACATTGTCCCACCAGGCGCAATGTAGCCGGGCGGCGCAGAGGATTTCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521455.1
ENST00000523340.1
CDS TCA 72 bp AAGCCCGATGTTGGAGGCGATCACCACTGTGAAGGCTaGGGCCAGCTCGATCGTGAAGCCGCTGGACGGCGT +
Preference number: 6 (lower is better)
Translates to: KPDVGGDHHCEG*GQLDREAAGRR
Trigger: ACGCCGTCCAGCGGCTTCACGATCGAGCTGGCCTCAGCCTTCACAGTGGTGATCGCCTCCAACATCGGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS GCA 72 bp CGCAGAAGTGCCTTCCGAGGTCCCCAGTGTCTCCCCTaGTGCTCCCGTGAGCGGGATGGTGCTGTCATCATT +
Preference number: 6 (lower is better)
Translates to: RRSAFRGPQCLP*CSRERDGAVII
Trigger: AATGATGACAGCACCATCCCGCTCACGGGAGCAGCAGGGGAGACACTGGGGACCTCGGAAGGCACTTCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342228.7
ENST00000518660.5
ENST00000520179.5
ENST00000520262.6
ENST00000522401.1
CDS CCA 72 bp CGCTCCTGGTGTGGCCGTCGAAGCCGAAGGTGCCGTTaGAGATGGGCGATTTCACAGAGCCATGGGTCATGG +
Preference number: 6 (lower is better)
Translates to: RSWCGRRSRRCR*RWAISQSHGSW
Trigger: CCATGACCCATGGCTCTGTGAAATCGCCCATCTCCAACGGCACCTTCGGCTTCGACGGCCACACCAGGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342228.7
ENST00000518660.5
ENST00000520179.5
ENST00000520262.6
CDS CAA 90 bp ACCGAGCCCACCTTACAGTGCGTGGTGCTGACTGGAAGCCCGATGTaGGAGGCGATCACCACTGTGAAGGCTGAGGCCAGCTCGATCGTG +
Preference number: 6 (lower is better)
Translates to: TEPTLQCVVLTGSPM*EAITTVKAEASSIV
Trigger: CACGATCGAGCTGGCCTCAGCCTTCACAGTGGTGATCGCCTCCAACATCGGGCTTCCAGTCAGCACCACGCACTGTAAGGTGGGCTCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS TCA 72 bp CAGGCGGTGAGGACCTGCAGGAAATGGAACAGGAGGTaGACCTCGGGTGCGTCCTTCTCCTCCTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: QAVRTCRKWNRR*TSGASFSSFSS
Trigger: GGAGGAGAAGGAGGAGAAGGACGCACCCGAGGTTCACCTCCTGTTCCATTTCCTGCAGGTCCTCACCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS GCA 72 bp AGAAGTGCCTTCCGAGGTCCCCAGTGTCTCCCCTGCTaGTCCCGTGAGCGGGATGGTGCTGTCATCATTAGC +
Preference number: 6 (lower is better)
Translates to: RSAFRGPQCLPC*SRERDGAVIIS
Trigger: GCTAATGATGACAGCACCATCCCGCTCACGGGAGCAGCAGGGGAGACACTGGGGACCTCGGAAGGCACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342228.7
ENST00000518660.5
ENST00000520179.5
ENST00000520262.6
ENST00000522401.1
CDS GCA 72 bp AGGTGTAACTGTTGTTTCGGCGCAGCAGCCGGTAGTTaGTTTCCTGGGCTGGCTTCTCCTCGGGGCCCCTGT +
Preference number: 6 (lower is better)
Translates to: RCNCCFGAAAGS*FPGLASPRGPC
Trigger: ACAGGGGCCCCGAGGAGAAGCCAGCCCAGGAAAGCAACTACCGGCTGCTGCGCCGAAACAACAGTTACACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CCA 72 bp CTTTGTGCACGGTGTGGTACACATGACCGTCGCTCCTaGTGTGGCCGTCGAAGCCGAAGGTGCCGTTGGAGA +
Preference number: 6 (lower is better)
Translates to: LCARCGTHDRRS*CGRRSRRCRWR
Trigger: TCTCCAACGGCACCTTCGGCTTCGACGGCCACACCAGGAGCGACGGTCATGTGTACCACACCGTGCACAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CCA 72 bp GTTTCGGCGCAGCAGCCGGTAGTTGCTTTCCTGGGCTaGCTTCTCCTCGGGGCCCCTGTCGATGTGGATTTT +
Preference number: 6 (lower is better)
Translates to: VSAQQPVVAFLG*LLLGAPVDVDF
Trigger: AAAATCCACATCGACAGGGGCCCCGAGGAGAAGCCAGCCCAGGAAAGCAACTACCGGCTGCTGCGCCGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CAA 72 bp TCGCTCCTGGTGTGGCCGTCGAAGCCGAAGGTGCCGTaGGAGATGGGCGATTTCACAGAGCCATGGGTCATG +
Preference number: 6 (lower is better)
Translates to: SLLVWPSKPKVP*EMGDFTEPWVM
Trigger: CATGACCCATGGCTCTGTGAAATCGCCCATCTCCAACGGCACCTTCGGCTTCGACGGCCACACCAGGAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342228.7
ENST00000518660.5
ENST00000520179.5
ENST00000520262.6
CDS CCA 72 bp TGGTGTGGCCGTCGAAGCCGAAGGTGCCGTTGGAGATaGGCGATTTCACAGAGCCATGGGTCATGGACAGTG +
Preference number: 6 (lower is better)
Translates to: WCGRRSRRCRWR*AISQSHGSWTV
Trigger: CACTGTCCATGACCCATGGCTCTGTGAAATCGCCCATCTCCAACGGCACCTTCGGCTTCGACGGCCACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342228.7
ENST00000518660.5
ENST00000520179.5
ENST00000520262.6
CDS CCA 72 bp CACCACCGAGCCCACCTTACAGTGCGTGGTGCTGACTaGAAGCCCGATGTTGGAGGCGATCACCACTGTGAA +
Preference number: 6 (lower is better)
Translates to: HHRAHLTVRGAD*KPDVGGDHHCE
Trigger: TTCACAGTGGTGATCGCCTCCAACATCGGGCTTCCAGTCAGCACCACGCACTGTAAGGTGGGCTCGGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CCA 72 bp CAGCCAGGGCCTCAATTTTTCTCCAGGCTTACTACCTaGCTCCTCGTTTCATCCGGAAACCGACCGGCCGGC +
Preference number: 6 (lower is better)
Translates to: QPGPQFFSRLTT*LLVSSGNRPAG
Trigger: GCCGGCCGGTCGGTTTCCGGATGAAACGAGGAGCCAGGTAGTAAGCCTGGAGAAAAATTGAGGCCCTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524237.1
CDS CAA 72 bp ACCTTACAGTGCGTGGTGCTGACTGGAAGCCCGATGTaGGAGGCGATCACCACTGTGAAGGCTGAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: TLQCVVLTGSPM*EAITTVKAEAS
Trigger: GCTGGCCTCAGCCTTCACAGTGGTGATCGCCTCCAACATCGGGCTTCCAGTCAGCACCACGCACTGTAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS TCA 72 bp CATTGCCGCCGTGAGCAAAGGACCCGAAACAGGCGGTaGGGACCTGCAGGAAATGGAACAGGAGGTGAACCT +
Preference number: 6 (lower is better)
Translates to: HCRREQRTRNRR*GPAGNGTGGEP
Trigger: AGGTTCACCTCCTGTTCCATTTCCTGCAGGTCCTCACCGCCTGTTTCGGGTCCTTTGCTCACGGCGGCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CCA 72 bp CAGCTCGAAAGGTGGCGTGCACTGGCAGCCCACAAATaGCTGCGGTGTAGCAGGTGTAACTGTTGTTTCGGC +
Preference number: 6 (lower is better)
Translates to: QLERWRALAAHK*LRCSRCNCCFG
Trigger: GCCGAAACAACAGTTACACCTGCTACACCGCAGCCATTTGTGGGCTGCCAGTGCACGCCACCTTTCGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CCA 72 bp AGTAGCTCGAGTAGCTGTCGTAGCGCAGCCTCTTCTTaGAGTAGGACACGGTGTCGCCCACCAGCTTCTCAC +
Preference number: 6 (lower is better)
Translates to: SSSSSCRSAASS*SRTRCRPPASH
Trigger: GTGAGAAGCTGGTGGGCGACACCGTGTCCTACTCCAAGAAGAGGCTGCGCTACGACAGCTACTCGAGCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CCA 72 bp AAGGTGCCGTTGGAGATGGGCGATTTCACAGAGCCATaGGTCATGGACAGTGCTCTTCCGTATGCAGCCCGA +
Preference number: 6 (lower is better)
Translates to: KVPLEMGDFTEP*VMDSALPYAAR
Trigger: TCGGGCTGCATACGGAAGAGCACTGTCCATGACCCATGGCTCTGTGAAATCGCCCATCTCCAACGGCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342228.7
ENST00000518660.5
ENST00000520179.5
ENST00000520262.6
CDS CAA 72 bp CCAGACGGGTGTAGCTGCTTCTTGCGTTACCCCGCCTaGTTTGTAAATCAGCCACAAGGCTACCAGGGGACC +
Preference number: 6 (lower is better)
Translates to: PDGCSCFLRYPA*FVNQPQGYQGT
Trigger: GGTCCCCTGGTAGCCTTGTGGCTGATTTACAAACAAGGCGGGGTAACGCAAGAAGCAGCTACACCCGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS GCA 72 bp GATGCCCTCAGGAGGCACTGTCCATCTGCAGCCTGCTaGCCAAAGCACAAACCGGTTGATCTTCATTGGTGT +
Preference number: 6 (lower is better)
Translates to: DALRRHCPSAAC*PKHKPVDLHWC
Trigger: ACACCAATGAAGATCAACCGGTTTGTGCTTTGGGCAGCAGGCTGCAGATGGACAGTGCCTCCTGAGGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522707.1
CDS GCA 72 bp AGGTATCCTGCAACATGGATCCCTAAAACATGGCGATaGCCTCAGGAGGCACTGTCCATCTGCAGCCTGCTG +
Preference number: 6 (lower is better)
Translates to: RYPATWIPKTWR*PQEALSICSLL
Trigger: CAGCAGGCTGCAGATGGACAGTGCCTCCTGAGGGCATCGCCATGTTTTAGGGATCCATGTTGCAGGATACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522707.1
CDS CCA 72 bp GCAGACAGGTATCCTGCAACATGGATCCCTAAAACATaGCGATGCCCTCAGGAGGCACTGTCCATCTGCAGC +
Preference number: 6 (lower is better)
Translates to: ADRYPATWIPKT*RCPQEALSICS
Trigger: GCTGCAGATGGACAGTGCCTCCTGAGGGCATCGCCATGTTTTAGGGATCCATGTTGCAGGATACCTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522707.1
CDS CAA 90 bp AAACAGCAGCCAGACGGGTGTAGCTGCTTCTTGCGTTACCCCGCCTaGTTTGTAAATCAGCCACAAGGCTACCAGGGGACCGATGGCATT +
Preference number: 6 (lower is better)
Translates to: KQQPDGCSCFLRYPA*FVNQPQGYQGTDGI
Trigger: AATGCCATCGGTCCCCTGGTAGCCTTGTGGCTGATTTACAAACAAGGCGGGGTAACGCAAGAAGCAGCTACACCCGTCTGGCTGCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CAA 90 bp GGAGGCACTGTCCATCTGCAGCCTGCTGCCCAAAGCACAAACCGGTaGATCTTCATTGGTGTGAGTTGGACATCACCAGCACAATCTCCC +
Preference number: 6 (lower is better)
Translates to: GGTVHLQPAAQSTNR*IFIGVSWTSPAQSP
Trigger: GGGAGATTGTGCTGGTGATGTCCAACTCACACCAATGAAGATCAACCGGTTTGTGCTTTGGGCAGCAGGCTGCAGATGGACAGTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522707.1
CDS GCA 72 bp CCTGAGATTGGAAGCCTCAGGAAGGAAGCAATCAGCTaGCACACAGCGGAACCAACCATGGCACTAACTTCC +
Preference number: 6 (lower is better)
Translates to: PEIGSLRKEAIS*HTAEPTMALTS
Trigger: GGAAGTTAGTGCCATGGTTGGTTCCGCTGTGTGGCAGCTGATTGCTTCCTTCCTGAGGCTTCCAATCTCAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CAA 72 bp GCTCCCGTGAGCGGGATGGTGCTGTCATCATTAGCCTaGGCACCTGGTAGCTCTTTAAATACTGGGGACTCT +
Preference number: 6 (lower is better)
Translates to: APVSGMVLSSLA*APGSSLNTGDS
Trigger: AGAGTCCCCAGTATTTAAAGAGCTACCAGGTGCCAAGGCTAATGATGACAGCACCATCCCGCTCACGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342228.7
ENST00000518660.5
ENST00000520179.5
ENST00000520262.6
ENST00000522401.1
CDS CAA 72 bp TCTTCCCAAACCCCAGTGTGGCCAAAAGGATGGGCGTaGTCACTGCCTGTGATCTGCTCCACTTCTGCAGAA +
Preference number: 6 (lower is better)
Translates to: SSQTPVWPKGWA*SLPVICSTSAE
Trigger: TTCTGCAGAAGTGGAGCAGATCACAGGCAGTGACAACGCCCATCCTTTTGGCCACACTGGGGTTTGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522401.1
CDS CCA 72 bp AGAAACTCTTCCCAAACCCCAGTGTGGCCAAAAGGATaGGCGTTGTCACTGCCTGTGATCTGCTCCACTTCT +
Preference number: 6 (lower is better)
Translates to: RNSSQTPVWPKG*ALSLPVICSTS
Trigger: AGAAGTGGAGCAGATCACAGGCAGTGACAACGCCCATCCTTTTGGCCACACTGGGGTTTGGGAAGAGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522401.1
CDS CCA 72 bp GCCTGCTGCCCAAAGCACAAACCGGTTGATCTTCATTaGTGTGAGTTGGACATCACCAGCACAATCTCCCTC +
Preference number: 6 (lower is better)
Translates to: ACCPKHKPVDLH*CELDITSTISL
Trigger: GAGGGAGATTGTGCTGGTGATGTCCAACTCACACCAATGAAGATCAACCGGTTTGTGCTTTGGGCAGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522707.1
CDS CAA 72 bp GTCCATCTGCAGCCTGCTGCCCAAAGCACAAACCGGTaGATCTTCATTGGTGTGAGTTGGACATCACCAGCA +
Preference number: 6 (lower is better)
Translates to: VHLQPAAQSTNR*IFIGVSWTSPA
Trigger: TGCTGGTGATGTCCAACTCACACCAATGAAGATCAACCGGTTTGTGCTTTGGGCAGCAGGCTGCAGATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522707.1
CDS CAA 90 bp CTCCTACTTTGGCGCCTAGTAACACGGAGCCGGTGGTTTCAAATATaGAAGCTAAAATGCATGCCTGCCTCAAGGTCACCACACCAGAGC +
Preference number: 6 (lower is better)
Translates to: LLLWRLVTRSRWFQI*KLKCMPASRSPHQS
Trigger: GCTCTGGTGTGGTGACCTTGAGGCAGGCATGCATTTTAGCTTCAATATTTGAAACCACCGGCTCCGTGTTACTAGGCGCCAAAGTAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342228.7
ENST00000517366.1
ENST00000518717.1
ENST00000520179.5
ENST00000520262.6
ENST00000524211.1
CDS CAA 90 bp AGAGTCTCCACCGTCTCGTTGTACAGGTTCACGTCAATGATACCTTaGCGAATGGTTTCTCCTACTTTGGCGCCTAGTAACACGGAGCCG +
Preference number: 6 (lower is better)
Translates to: RVSTVSLYRFTSMIP*RMVSPTLAPSNTEP
Trigger: CGGCTCCGTGTTACTAGGCGCCAAAGTAGGAGAAACCATTCGCAAAGGTATCATTGACGTGAACCTGTACAACGAGACGGTGGAGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
ENST00000524211.1
CDS GCA 72 bp ACACGGAGCCGGTGGTTTCAAATATTGAAGCTAAAATaGATGCCTGCCTCAAGGTCACCACACCAGAGCCCA +
Preference number: 6 (lower is better)
Translates to: TRSRWFQILKLK*MPASRSPHQSP
Trigger: TGGGCTCTGGTGTGGTGACCTTGAGGCAGGCATGCATTTTAGCTTCAATATTTGAAACCACCGGCTCCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342228.7
ENST00000517366.1
ENST00000518717.1
ENST00000520179.5
ENST00000520262.6
ENST00000524211.1
CDS CCA 72 bp AGCGGTAAAACACATTCCATATTTTTCCTCCCGATCTaGGAAAGCTGTGATGTCTCCTCCTGCCCTCGGTCC +
Preference number: 6 (lower is better)
Translates to: SGKTHSIFFLPI*ESCDVSSCPRS
Trigger: GGACCGAGGGCAGGAGGAGACATCACAGCTTTCCCAGATCGGGAGGAAAAATATGGAATGTGTTTTACCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342228.7
CDS CCA 72 bp CCCAGGCTTCATTCAAGGGCACTTCCTCCTAATTCCTaGACAGCTGGTGTGGTGATGTATACACTCCCCTAT +
Preference number: 6 (lower is better)
Translates to: PRLHSRALPPNS*TAGVVMYTLPY
Trigger: ATAGGGGAGTGTATACATCACCACACCAGCTGTCCAGGAATTAGGAGGAAGTGCCCTTGAATGAAGCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519463.1
ENST00000521455.1
CDS CAA 90 bp ACCATGGCACTAACTTCCCCAGCCATGAGAGTCTCCACCGTCTCGTaGTACAGGTTCACGTCAATGATACCTTTGCGAATGGTTTCTCCT +
Preference number: 6 (lower is better)
Translates to: TMALTSPAMRVSTVS*YRFTSMIPLRMVSP
Trigger: AGGAGAAACCATTCGCAAAGGTATCATTGACGTGAACCTGTACAACGAGACGGTGGAGACTCTCATGGCTGGGGAAGTTAGTGCCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
ENST00000524211.1
CDS TCA 72 bp GAGTCTCCACCGTCTCGTTGTACAGGTTCACGTCAATaGTACCTTTGCGAATGGTTTCTCCTACTTTGGCGC +
Preference number: 6 (lower is better)
Translates to: ESPPSRCTGSRQ*YLCEWFLLLWR
Trigger: GCGCCAAAGTAGGAGAAACCATTCGCAAAGGTATCATTGACGTGAACCTGTACAACGAGACGGTGGAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
ENST00000524211.1
CDS GCA 72 bp AACTCCTCCATAAAACAGCAGCCAGACGGGTGTAGCTaGTTCTTGCGTTACCCCGCCTTGTTTGTAAATCAG +
Preference number: 6 (lower is better)
Translates to: NSSIKQQPDGCS*FLRYPALFVNQ
Trigger: CTGATTTACAAACAAGGCGGGGTAACGCAAGAAGCAGCTACACCCGTCTGGCTGCTGTTTTATGGAGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CCA 72 bp AAAGACATTGATTGCTATGGTAGCAGCATAGAATACTaGGAGTGCCCGGAGGCCATTGGGAACAGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: KDIDCYGSSIEY*ECPEAIGNRVF
Trigger: GAAGACCCTGTTCCCAATGGCCTCCGGGCACTCCCAGTATTCTATGCTGCTACCATAGCAATCAATGTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342228.7
ENST00000518660.5
ENST00000520179.5
ENST00000520262.6
ENST00000522401.1
CDS CAA 72 bp TGGCGCCTAGTAACACGGAGCCGGTGGTTTCAAATATaGAAGCTAAAATGCATGCCTGCCTCAAGGTCACCA +
Preference number: 6 (lower is better)
Translates to: WRLVTRSRWFQI*KLKCMPASRSP
Trigger: TGGTGACCTTGAGGCAGGCATGCATTTTAGCTTCAATATTTGAAACCACCGGCTCCGTGTTACTAGGCGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342228.7
ENST00000517366.1
ENST00000518717.1
ENST00000520179.5
ENST00000520262.6
ENST00000524211.1
CDS CAA 72 bp CTAACTTCCCCAGCCATGAGAGTCTCCACCGTCTCGTaGTACAGGTTCACGTCAATGATACCTTTGCGAATG +
Preference number: 6 (lower is better)
Translates to: LTSPAMRVSTVS*YRFTSMIPLRM
Trigger: CATTCGCAAAGGTATCATTGACGTGAACCTGTACAACGAGACGGTGGAGACTCTCATGGCTGGGGAAGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
ENST00000524211.1
CDS CAA 72 bp TCCATAAAACAGCAGCCAGACGGGTGTAGCTGCTTCTaGCGTTACCCCGCCTTGTTTGTAAATCAGCCACAA +
Preference number: 6 (lower is better)
Translates to: SIKQQPDGCSCF*RYPALFVNQPQ
Trigger: TTGTGGCTGATTTACAAACAAGGCGGGGTAACGCAAGAAGCAGCTACACCCGTCTGGCTGCTGTTTTATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
CDS CAA 90 bp GCCTGCTGCCCAAAGCACAAACCGGTTGATCTTCATTGGTGTGAGTaGGACATCACCAGCACAATCTCCCTCCTGTTGTTTACAAACACT +
Preference number: 6 (lower is better)
Translates to: ACCPKHKPVDLHWCE*DITSTISLLLFTNT
Trigger: AGTGTTTGTAAACAACAGGAGGGAGATTGTGCTGGTGATGTCCAACTCACACCAATGAAGATCAACCGGTTTGTGCTTTGGGCAGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522707.1
CDS GCA 72 bp ATTGATTGCTATGGTAGCAGCATAGAATACTGGGAGTaGCCGGAGGCCATTGGGAACAGGGTCTTCCTTTTT +
Preference number: 6 (lower is better)
Translates to: IDCYGSSIEYWE*PEAIGNRVFLF
Trigger: AAAAAGGAAGACCCTGTTCCCAATGGCCTCCGGGCACTCCCAGTATTCTATGCTGCTACCATAGCAATCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342228.7
ENST00000518660.5
ENST00000520179.5
ENST00000520262.6
CDS CCA 72 bp CGCCAACACCAGACCATCCCTTTAGCTGTTTGCAGCTaGAAGAAGACAAATCACACATATGGAAGGATCCCA +
Preference number: 6 (lower is better)
Translates to: RQHQTIPLAVCS*KKTNHTYGRIP
Trigger: TGGGATCCTTCCATATGTGTGATTTGTCTTCTTCCAGCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS CAA 72 bp TCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTaGCAGCTGGAAGAAGACAAATCACACATATGGAAG +
Preference number: 6 (lower is better)
Translates to: SHTPTPDHPFSC*QLEEDKSHIWK
Trigger: CTTCCATATGTGTGATTTGTCTTCTTCCAGCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS CAA 90 bp ACACATGTCTCCCACACGCCAACACCAGACCATCCCTTTAGCTGTTaGCAGCTGGAAGAAGACAAATCACACATATGGAAGGATCCCATA +
Preference number: 6 (lower is better)
Translates to: THVSHTPTPDHPFSC*QLEEDKSHIWKDPI
Trigger: TATGGGATCCTTCCATATGTGTGATTTGTCTTCTTCCAGCTGCAAACAGCTAAAGGGATGGTCTGGTGTTGGCGTGTGGGAGACATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342228.7
ENST00000520262.6
CDS CAA 90 bp GTGTCAGCCACGCACCATTTAGGACGGGGAGAATGGAAAGCCAGTTaGGAGAACAGACGCTTTCTTAAGAGTACACGTGAATATGAAAAG +
Preference number: 6 (lower is better)
Translates to: VSATHHLGRGEWKAS*ENRRFLKSTREYEK
Trigger: CTTTTCATATTCACGTGTACTCTTAAGAAAGCGTCTGTTCTCCAAACTGGCTTTCCATTCTCCCCGTCCTAAATGGTGCGTGGCTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521455.1
ENST00000523340.1
CDS TCA 72 bp CCTGGTAGCTCTTTAAATACTGGGGACTCTGCTTCCTaGACCTTACTGAGGCTTTCGTCAGATACTCGTGAT +
Preference number: 6 (lower is better)
Translates to: PGSSLNTGDSAS*TLLRLSSDTRD
Trigger: ATCACGAGTATCTGACGAAAGCCTCAGTAAGGTTCAGGAAGCAGAGTCCCCAGTATTTAAAGAGCTACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342228.7
ENST00000518660.5
ENST00000520179.5
ENST00000520262.6
ENST00000522401.1
CDS TCA 72 bp ATTCAGAACCTAACAAGCCCTGTGACTTGGCAGAGCTaGCCTTCACACATTTATGGCCACACTCAGACATCA +
Preference number: 6 (lower is better)
Translates to: IQNLTSPVTWQS*PSHIYGHTQTS
Trigger: TGATGTCTGAGTGTGGCCATAAATGTGTGAAGGTCAGCTCTGCCAAGTCACAGGGCTTGTTAGGTTCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518660.5
CDS CAA 72 bp ACGTCAATGATACCTTTGCGAATGGTTTCTCCTACTTaGGCGCCTAGTAACACGGAGCCGGTGGTTTCAAAT +
Preference number: 6 (lower is better)
Translates to: TSMIPLRMVSPT*APSNTEPVVSN
Trigger: ATTTGAAACCACCGGCTCCGTGTTACTAGGCGCCAAAGTAGGAGAAACCATTCGCAAAGGTATCATTGACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342228.7
ENST00000518717.1
ENST00000520179.5
ENST00000520262.6
ENST00000524211.1
CDS CAA 72 bp ACCGTCTCGTTGTACAGGTTCACGTCAATGATACCTTaGCGAATGGTTTCTCCTACTTTGGCGCCTAGTAAC +
Preference number: 6 (lower is better)
Translates to: TVSLYRFTSMIP*RMVSPTLAPSN
Trigger: GTTACTAGGCGCCAAAGTAGGAGAAACCATTCGCAAAGGTATCATTGACGTGAACCTGTACAACGAGACGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
ENST00000524211.1
CDS CAA 72 bp CTCCTCCATTTAGGACGGGGAGAATGGAAAGCCAGTTaGGAGAACAGACGCTTTCTTAAGAGTACACGTGAA +
Preference number: 6 (lower is better)
Translates to: LLHLGRGEWKAS*ENRRFLKSTRE
Trigger: TTCACGTGTACTCTTAAGAAAGCGTCTGTTCTCCAAACTGGCTTTCCATTCTCCCCGTCCTAAATGGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518717.1
CDS CAA 72 bp ACGCACCATTTAGGACGGGGAGAATGGAAAGCCAGTTaGGAGAACAGACGCTTTCTTAAGAGTACACGTGAA +
Preference number: 6 (lower is better)
Translates to: THHLGRGEWKAS*ENRRFLKSTRE
Trigger: TTCACGTGTACTCTTAAGAAAGCGTCTGTTCTCCAAACTGGCTTTCCATTCTCCCCGTCCTAAATGGTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521455.1
ENST00000523340.1
CDS CAA 72 bp CCAAAGCACAAACCGGTTGATCTTCATTGGTGTGAGTaGGACATCACCAGCACAATCTCCCTCCTGTTGTTT +
Preference number: 6 (lower is better)
Translates to: PKHKPVDLHWCE*DITSTISLLLF
Trigger: AAACAACAGGAGGGAGATTGTGCTGGTGATGTCCAACTCACACCAATGAAGATCAACCGGTTTGTGCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522707.1
CDS CAA 90 bp TACAGGTTCACGTCAATGATACCTTTGCGAATGGTTTCTCCTACTTaGGCGCCTAGTAACACGGAGCCGGTGGTTTCAAATATTGAAGCT +
Preference number: 6 (lower is better)
Translates to: YRFTSMIPLRMVSPT*APSNTEPVVSNIEA
Trigger: AGCTTCAATATTTGAAACCACCGGCTCCGTGTTACTAGGCGCCAAAGTAGGAGAAACCATTCGCAAAGGTATCATTGACGTGAACCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342228.7
ENST00000520179.5
ENST00000520262.6
ENST00000524211.1
CDS CAA 90 bp GGGGACCAACATCCCAGTGAACTGTTCCTATTTGTTCTCCCACTGTaGTTACCTCCTATTTCTCTGTCCATACAGAGTAAAACTCTGAGC +
Preference number: 6 (lower is better)
Translates to: GDQHPSELFLFVLPL*LPPISLSIQSKTLS
Trigger: GCTCAGAGTTTTACTCTGTATGGACAGAGAAATAGGAGGTAACAACAGTGGGAGAACAAATAGGAACAGTTCACTGGGATGTTGGTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523340.1
CDS CCA 72 bp GGAGACAGAGTGGAAGGTCAGGATCCCAGCAGCATTTaGAGCCAACACAGACAAAATGATACAAAATACTGT +
Preference number: 6 (lower is better)
Translates to: GDRVEGQDPSSI*SQHRQNDTKYC
Trigger: ACAGTATTTTGTATCATTTTGTCTGTGTTGGCTCCAAATGCTGCTGGGATCCTGACCTTCCACTCTGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522401.1
CDS CAA 72 bp AGCAACTTTAATTCAGAACCTAACAAGCCCTGTGACTaGGCAGAGCTGACCTTCACACATTTATGGCCACAC +
Preference number: 6 (lower is better)
Translates to: SNFNSEPNKPCD*AELTFTHLWPH
Trigger: GTGTGGCCATAAATGTGTGAAGGTCAGCTCTGCCAAGTCACAGGGCTTGTTAGGTTCTGAATTAAAGTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518660.5
CDS CAA 90 bp AAACCAAGAAGCAACTTTAATTCAGAACCTAACAAGCCCTGTGACTaGGCAGAGCTGACCTTCACACATTTATGGCCACACTCAGACATC +
Preference number: 6 (lower is better)
Translates to: KPRSNFNSEPNKPCD*AELTFTHLWPHSDI
Trigger: GATGTCTGAGTGTGGCCATAAATGTGTGAAGGTCAGCTCTGCCAAGTCACAGGGCTTGTTAGGTTCTGAATTAAAGTTGCTTCTTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518660.5
CDS TCA 72 bp TCAATGAAAGCCAATTTCTGGGGACCAACATCCCAGTaGACTGTTCCTATTTGTTCTCCCACTGTTGTTACC +
Preference number: 6 (lower is better)
Translates to: SMKANFWGPTSQ*TVPICSPTVVT
Trigger: GGTAACAACAGTGGGAGAACAAATAGGAACAGTTCACTGGGATGTTGGTCCCCAGAAATTGGCTTTCATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523340.1
CDS CCA 72 bp AGCGGTAAAACACATTCCATATTTTTCCTCCCGATCTaGGAAAGCTGTGATGTCTCCTCCTCCTATTTCTCT +
Preference number: 6 (lower is better)
Translates to: SGKTHSIFFLPI*ESCDVSSSYFS
Trigger: AGAGAAATAGGAGGAGGAGACATCACAGCTTTCCCAGATCGGGAGGAAAAATATGGAATGTGTTTTACCGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524211.1
CDS CCA 72 bp AGCGGTAAAACACATTCCATATTTTTCCTCCCGATCTaGGAAAGCTGTGATGTCTCCTCAAGTAGTTTCCAA +
Preference number: 6 (lower is better)
Translates to: SGKTHSIFFLPI*ESCDVSSSSFQ
Trigger: TTGGAAACTACTTGAGGAGACATCACAGCTTTCCCAGATCGGGAGGAAAAATATGGAATGTGTTTTACCGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520262.6
CDS CCA 72 bp AGCGGTAAAACACATTCCATATTTTTCCTCCCGATCTaGGAAAGCTGTGATGTCTCCTCCATGAATCTATTT +
Preference number: 6 (lower is better)
Translates to: SGKTHSIFFLPI*ESCDVSSMNLF
Trigger: AAATAGATTCATGGAGGAGACATCACAGCTTTCCCAGATCGGGAGGAAAAATATGGAATGTGTTTTACCGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524237.1
CDS CCA 72 bp AGCGGTAAAACACATTCCATATTTTTCCTCCCGATCTaGGAAAGCTGTGATGTCTCCTCCTATAATCCTATA +
Preference number: 6 (lower is better)
Translates to: SGKTHSIFFLPI*ESCDVSSYNPI
Trigger: TATAGGATTATAGGAGGAGACATCACAGCTTTCCCAGATCGGGAGGAAAAATATGGAATGTGTTTTACCGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522707.1
CDS CAA 72 bp CATCCCAGTGAACTGTTCCTATTTGTTCTCCCACTGTaGTTACCTCCTATTTCTCTGTCCATACAGAGTAAA +
Preference number: 6 (lower is better)
Translates to: HPSELFLFVLPL*LPPISLSIQSK
Trigger: TTTACTCTGTATGGACAGAGAAATAGGAGGTAACAACAGTGGGAGAACAAATAGGAACAGTTCACTGGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523340.1
CDS GCA 72 bp TTTCCAAGAAAACTGAGCCACAATTCTTCAGAAGACTaGTCTCCTGATCACAAACACAATCTGAAGTCTAAA +
Preference number: 6 (lower is better)
Translates to: FPRKLSHNSSED*SPDHKHNLKSK
Trigger: TTTAGACTTCAGATTGTGTTTGTGATCAGGAGAGCAGTCTTCTGAAGAATTGTGGCTCAGTTTTCTTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520262.6